Your job contains 1 sequence.
>psy18091
MSSIFDLETLLDNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNP
QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT
TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA
VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF
DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH
LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS
CSDDGDVKLWQIKLENL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy18091
(377 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 1238 4.8e-126 1
UNIPROTKB|B4GDM7 - symbol:Ciao1 "Probable cytosolic iron-... 1212 2.7e-123 1
UNIPROTKB|Q292E8 - symbol:Ciao1 "Probable cytosolic iron-... 1212 2.7e-123 1
UNIPROTKB|B4MY77 - symbol:Ciao1 "Probable cytosolic iron-... 1210 4.4e-123 1
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 1208 7.2e-123 1
UNIPROTKB|B4P7Q3 - symbol:Ciao1 "Probable cytosolic iron-... 1208 7.2e-123 1
FB|FBgn0033972 - symbol:Ciao1 "Ciao1" species:7227 "Droso... 1206 1.2e-122 1
UNIPROTKB|B3MC74 - symbol:Ciao1 "Probable cytosolic iron-... 1205 1.5e-122 1
UNIPROTKB|B4QFZ8 - symbol:Ciao1 "Probable cytosolic iron-... 1203 2.4e-122 1
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 1203 2.4e-122 1
UNIPROTKB|B4HRQ6 - symbol:Ciao1 "Probable cytosolic iron-... 1197 1.1e-121 1
UNIPROTKB|B4KTK4 - symbol:Ciao1 "Probable cytosolic iron-... 1179 8.5e-120 1
UNIPROTKB|B4JW81 - symbol:Ciao1 "Probable cytosolic iron-... 1173 3.7e-119 1
UNIPROTKB|B4LJT7 - symbol:Ciao1 "Probable cytosolic iron-... 1172 4.7e-119 1
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 1158 1.4e-117 1
UNIPROTKB|O76071 - symbol:CIAO1 "Probable cytosolic iron-... 1154 3.8e-117 1
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 1131 1.0e-114 1
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 1129 1.7e-114 1
UNIPROTKB|A7RWD2 - symbol:v1g226592 "Probable cytosolic i... 1126 3.5e-114 1
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 1126 3.5e-114 1
UNIPROTKB|Q28DW0 - symbol:ciao1 "Probable cytosolic iron-... 1078 4.3e-109 1
UNIPROTKB|B5X212 - symbol:ciao1b "Probable cytosolic iron... 1066 8.1e-108 1
UNIPROTKB|B5X9P2 - symbol:ciao1a "Probable cytosolic iron... 1061 2.7e-107 1
UNIPROTKB|F1SU35 - symbol:CIAO1 "Uncharacterized protein"... 1046 1.1e-105 1
ZFIN|ZDB-GENE-040426-839 - symbol:ciao1 "cytosolic iron-s... 1044 1.7e-105 1
TAIR|locus:2057381 - symbol:emb1345 "AT2G26060" species:3... 817 2.0e-81 1
UNIPROTKB|B3RNR8 - symbol:TRIADDRAFT_20668 "Probable cyto... 813 5.2e-81 1
UNIPROTKB|B7QKS1 - symbol:ISCW023049 "Probable cytosolic ... 754 9.3e-75 1
UNIPROTKB|H9L0T1 - symbol:CIAO1 "Uncharacterized protein"... 741 2.2e-73 1
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 730 3.2e-72 1
TAIR|locus:2123752 - symbol:AT4G32990 "AT4G32990" species... 551 8.7e-65 2
UNIPROTKB|Q5DFU0 - symbol:Q5DFU0 "Probable cytosolic iron... 652 6.0e-64 1
WB|WBGene00012479 - symbol:Y18D10A.9 species:6239 "Caenor... 597 4.0e-58 1
UNIPROTKB|Q9XW12 - symbol:Y18D10A.9 "Probable cytosolic i... 597 4.0e-58 1
POMBASE|SPAC806.02c - symbol:SPAC806.02c "Par A family AT... 566 7.8e-55 1
SGD|S000002675 - symbol:CIA1 "Component of cytosolic iron... 534 1.9e-51 1
CGD|CAL0000383 - symbol:orf19.4293 species:5476 "Candida ... 470 1.2e-44 1
UNIPROTKB|Q5AG86 - symbol:CIA1 "Probable cytosolic iron-s... 470 1.2e-44 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 319 3.2e-27 1
UNIPROTKB|A4R7U3 - symbol:CIA1 "Probable cytosolic iron-s... 276 9.1e-27 2
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 284 2.4e-24 1
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 283 2.8e-24 1
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 282 4.0e-24 1
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 282 4.5e-24 1
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 282 4.5e-24 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 282 5.6e-24 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 282 8.3e-24 1
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 278 1.1e-23 1
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 278 1.1e-23 1
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 277 1.4e-23 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 273 7.5e-23 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 262 1.3e-22 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 262 1.3e-22 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 262 1.3e-22 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 262 1.3e-22 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 262 1.3e-22 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 262 1.3e-22 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 262 1.3e-22 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 261 1.6e-22 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 242 3.2e-22 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 256 6.6e-22 2
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 273 9.0e-22 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 262 4.7e-21 1
SGD|S000006382 - symbol:PRP4 "Splicing factor" species:49... 260 1.7e-20 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 249 2.5e-20 1
UNIPROTKB|Q8N0X2 - symbol:SPAG16 "Sperm-associated antige... 261 3.1e-20 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 241 3.2e-20 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 254 5.6e-20 1
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 257 9.1e-20 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 262 1.2e-19 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 258 1.2e-19 1
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 253 2.5e-19 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 249 2.6e-19 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 249 2.6e-19 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 249 2.6e-19 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 249 2.6e-19 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 249 2.6e-19 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 249 2.6e-19 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 249 2.6e-19 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 249 2.6e-19 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 249 2.6e-19 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 248 3.4e-19 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 248 3.6e-19 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 231 4.6e-19 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 247 4.7e-19 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 253 4.8e-19 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 246 6.2e-19 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 245 8.2e-19 1
UNIPROTKB|F1MFJ6 - symbol:TBL1XR1 "Uncharacterized protei... 248 8.2e-19 1
MGI|MGI:1913972 - symbol:Spag16 "sperm associated antigen... 248 8.7e-19 2
UNIPROTKB|Q229Z6 - symbol:TTHERM_01308010 "POC1 centriola... 249 1.1e-18 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 245 1.5e-18 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 245 1.5e-18 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 243 1.6e-18 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 243 1.6e-18 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 242 1.8e-18 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 243 2.2e-18 1
UNIPROTKB|Q9BZK7 - symbol:TBL1XR1 "F-box-like/WD repeat-c... 244 2.6e-18 1
UNIPROTKB|F1SGD0 - symbol:TBL1XR1 "Uncharacterized protei... 244 2.6e-18 1
MGI|MGI:2441730 - symbol:Tbl1xr1 "transducin (beta)-like ... 244 2.6e-18 1
WARNING: Descriptions of 1252 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 1238 (440.9 bits), Expect = 4.8e-126, P = 4.8e-126
Identities = 213/332 (64%), Positives = 269/332 (81%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q L GH+GR W W+P+G ++++CGEDK IR+W +++ ++ AK +LSDGH RTIR+
Sbjct: 8 QCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDA-SQRWVAKTVLSDGHSRTIRDV 66
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWSPCG ++ASASFDAT A+WDK+SG+FECNATLEGHENEVKSV+WSK+G LATCSRDK
Sbjct: 67 AWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDK 126
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVWVWEV +EDEYECAAV+N H QDVKKV +HP ++ILASASYD+T+KL+KED A++DW
Sbjct: 127 SVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLADSDWS 186
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
+F TL SH STVWS++FD G+RLA+CSDD TVKIW+EYKPGN G+ PDN VWKCVC
Sbjct: 187 SFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKIWQEYKPGNEFGVSCPDNTPVWKCVC 246
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
TL+G+H R++YDISWC + L+ATACGDD +RIFKE E +F++V ++H AH+Q
Sbjct: 247 TLAGYHSRSVYDISWCKQSGLLATACGDDMVRIFKE-VEGSSPHEPTFEMVGSKH-AHSQ 304
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
DVN V WNP V G+L + SDDGDVKLW+ + E
Sbjct: 305 DVNTVEWNPTVVGLLVTTSDDGDVKLWKYEPE 336
Score = 250 (93.1 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 65/211 (30%), Positives = 105/211 (49%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN-AHIQ 187
G+ E L GH W G LATC DK++ +W + V++ H +
Sbjct: 2 GKLELLQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSR 61
Query: 188 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247
++ V + P LASAS+D TV ++ DK ++ ATL+ H + V S+++ + GS L
Sbjct: 62 TIRDVAWSPCGQYLASASFDATVAIW--DKKSGEFECNATLEGHENEVKSVSWSKSGSLL 119
Query: 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 307
ATCS D +V +W+ + D ++C L+ H + + + W D++A+
Sbjct: 120 ATCSRDKSVWVWE---------VAQEDE---YECAAVLNTHT-QDVKKVEWHPHEDILAS 166
Query: 308 ACGDDAIRIFKENPEAGDSDMVSFD-LVHTE 337
A D+ I+++KE + DSD SFD LV E
Sbjct: 167 ASYDNTIKLYKE--DLADSDWSSFDTLVSHE 195
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
Identities = 212/333 (63%), Positives = 259/333 (77%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLS--GNTWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+NAH QDVK+V +HP +ILASASYD+T+K+F E + +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLD 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
+DW ATL SHTSTVWS+ FD G RL +CSDD T+KIW+ Y PGN AGI TPD SVW
Sbjct: 182 SDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCTLSG H R IYD+SWC LT LIAT CGDD IRIFKE ++ D +F+ + E
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDS-KRDEPTFEQLTAEET 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH QDVN V WNP V G L SCSDDG +K+W++
Sbjct: 301 AHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKV 333
Score = 243 (90.6 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 61/208 (29%), Positives = 103/208 (49%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
G+ TL+GH+ + V W G A+C DK++ VW + + + H +
Sbjct: 2 GRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRT 61
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
++++R+ P LASAS+D T ++ + E + N ATL+ H + V S+++ R G LA
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFE-CN-ATLEGHENEVKSVSWSRSGGLLA 119
Query: 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308
TCS D +V IW+ AG D ++C L+ H + + + W D++A+A
Sbjct: 120 TCSRDKSVWIWEV------AG------DDEFECAAVLNAHT-QDVKRVVWHPTKDILASA 166
Query: 309 CGDDAIRIFKENPEAGDSDMVSFDLVHT 336
D+ I++F E+ D D + HT
Sbjct: 167 SYDNTIKMFAESQLDSDWDCTATLSSHT 194
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
Identities = 212/333 (63%), Positives = 259/333 (77%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLS--GNTWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+NAH QDVK+V +HP +ILASASYD+T+K+F E + +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLD 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
+DW ATL SHTSTVWS+ FD G RL +CSDD T+KIW+ Y PGN AGI TPD SVW
Sbjct: 182 SDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCTLSG H R IYD+SWC LT LIAT CGDD IRIFKE ++ D +F+ + E
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDS-KRDEPTFEQLTAEET 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH QDVN V WNP V G L SCSDDG +K+W++
Sbjct: 301 AHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKV 333
Score = 243 (90.6 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 61/208 (29%), Positives = 103/208 (49%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
G+ TL+GH+ + V W G A+C DK++ VW + + + H +
Sbjct: 2 GRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRT 61
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
++++R+ P LASAS+D T ++ + E + N ATL+ H + V S+++ R G LA
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFE-CN-ATLEGHENEVKSVSWSRSGGLLA 119
Query: 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308
TCS D +V IW+ AG D ++C L+ H + + + W D++A+A
Sbjct: 120 TCSRDKSVWIWEV------AG------DDEFECAAVLNAHT-QDVKRVVWHPTKDILASA 166
Query: 309 CGDDAIRIFKENPEAGDSDMVSFDLVHT 336
D+ I++F E+ D D + HT
Sbjct: 167 SYDNTIKMFAESQLDSDWDCTATLSSHT 194
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 1210 (431.0 bits), Expect = 4.4e-123, P = 4.4e-123
Identities = 212/333 (63%), Positives = 258/333 (77%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G +SCGEDK IR+W GN ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLS--GNSWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WSK+G LATC
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+N H QDVK+V +HP ILASASYD+T+K+F E +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEILASASYDNTIKMFAESALD 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
+DW ATL SHTSTVWS+ FD G RL +CSDD T+KIW+ Y PGN AG+ TPD +VW
Sbjct: 182 SDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDTTLKIWRAYHPGNDAGVATPDKQTVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCTLSG H R IYD+SWC LT LIATACGDD IRIFKE+ ++ D +F+ V E
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDS-KRDEPTFEQVTAEES 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH QDVN V WNPV+ G L SCSDDG +K+W++
Sbjct: 301 AHEQDVNSVEWNPVMAGQLISCSDDGTIKIWKM 333
Score = 233 (87.1 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 58/208 (27%), Positives = 103/208 (49%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
G+ TL+GH+ + V W G A+C DK++ +W + + + H +
Sbjct: 2 GRLILEHTLQGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWSTKTILSDGHKRT 61
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
++++R+ P LASAS+D T ++ + E + N ATL+ H + V S+++ + G LA
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFE-CN-ATLEGHENEVKSVSWSKSGGLLA 119
Query: 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308
TCS D +V IW+ AG D ++C L+ H + + + W +++A+A
Sbjct: 120 TCSRDKSVWIWEV------AG------DDEFECAAVLNPHT-QDVKRVVWHPTKEILASA 166
Query: 309 CGDDAIRIFKENPEAGDSDMVSFDLVHT 336
D+ I++F E+ D D + HT
Sbjct: 167 SYDNTIKMFAESALDSDWDCTATLSSHT 194
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 209/333 (62%), Positives = 260/333 (78%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W G+ ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GSTWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+N+H QDVK+V +HP +LASASYD+T+K++ ED +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEVLASASYDNTIKMYAEDPVD 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
DW ATL SHTST+W + FD G RL +CSDD T+KIWK Y PGNSAG+ TPD +VW
Sbjct: 182 NDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTIKIWKAYHPGNSAGVATPDQQTVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCTLSG H R IYD+SWC LT LIATACGDD IRIFKE ++ D +F+ + E
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDS-KPDEPTFEQLTAEEG 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
Score = 242 (90.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 59/208 (28%), Positives = 104/208 (50%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
G+ TL+GH+ + V W G A+C DK++ +W + + + H +
Sbjct: 2 GRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRT 61
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
++++R+ P LASAS+D T ++ + E + N ATL+ H + V S+++ R G LA
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFE-CN-ATLEGHENEVKSVSWSRSGGLLA 119
Query: 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308
TCS D +V IW+ AG D ++C L+ H + + + W +++A+A
Sbjct: 120 TCSRDKSVWIWEV------AG------DDEFECAAVLNSHT-QDVKRVVWHPTKEVLASA 166
Query: 309 CGDDAIRIFKENPEAGDSDMVSFDLVHT 336
D+ I+++ E+P D D + HT
Sbjct: 167 SYDNTIKMYAEDPVDNDWDCTATLTSHT 194
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 210/333 (63%), Positives = 260/333 (78%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GNTWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+N+H QDVK+V +HP ILASASYD+T+K++ E+ +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEILASASYDNTIKMYAEEPID 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
DW ATL SHTST+W + FD G RL +CSDD TVKIW+ Y PGNSAG+ TPD +VW
Sbjct: 182 NDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTVKIWRAYHPGNSAGVATPDQQTVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCTLSG H R IYD+SWC LT LIATACGDD IRIFKE ++ D +F+ + E
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDS-KPDEPTFEQLTAEES 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
Score = 237 (88.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 58/208 (27%), Positives = 103/208 (49%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
G+ TL+GH+ + V W G A+C DK++ +W + + + H +
Sbjct: 2 GRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRT 61
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
++++++ P LASAS+D T ++ + E + N ATL+ H + V S+++ R G LA
Sbjct: 62 IREIQWSPCGQYLASASFDATTAIWSKSSGEFE-CN-ATLEGHENEVKSVSWSRSGGLLA 119
Query: 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308
TCS D +V IW+ AG D ++C L+ H + + + W +++A+A
Sbjct: 120 TCSRDKSVWIWEV------AG------DDEFECAAVLNSHT-QDVKRVVWHPTKEILASA 166
Query: 309 CGDDAIRIFKENPEAGDSDMVSFDLVHT 336
D+ I+++ E P D D + HT
Sbjct: 167 SYDNTIKMYAEEPIDNDWDCTATLTSHT 194
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 1206 (429.6 bits), Expect = 1.2e-122, P = 1.2e-122
Identities = 209/333 (62%), Positives = 261/333 (78%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GNTWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+N H QDVK+V +HP +ILASASYD+T+K+F E+ +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPID 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
DW ATL SHTSTVW + FD G RL +CSDD T+KIW+ Y PGN+AG+ TPD +VW
Sbjct: 182 NDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCT+SG H R IYD+SWC LT LIATACGDD IRIFKE+ ++ D +F+ + E
Sbjct: 242 KCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDS-KPDEPTFEQITAEEG 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
Score = 246 (91.7 bits), Expect = 8.1e-21, P = 8.1e-21
Identities = 61/208 (29%), Positives = 103/208 (49%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
G+ TL+GH+ + V W G A+C DK++ +W + + + H +
Sbjct: 2 GRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRT 61
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
++++R+ P LASAS+D T ++ + E + N ATL+ H + V S+++ R G LA
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFE-CN-ATLEGHENEVKSVSWSRSGGLLA 119
Query: 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308
TCS D +V IW+ AG D ++C L+ H + + + W D++A+A
Sbjct: 120 TCSRDKSVWIWEV------AG------DDEFECAAVLNPHT-QDVKRVVWHPTKDILASA 166
Query: 309 CGDDAIRIFKENPEAGDSDMVSFDLVHT 336
D+ I++F E P D D + HT
Sbjct: 167 SYDNTIKMFAEEPIDNDWDCTATLTSHT 194
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 1205 (429.2 bits), Expect = 1.5e-122, P = 1.5e-122
Identities = 208/328 (63%), Positives = 258/328 (78%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN +T K ILSDGH+RTIRE
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLN--GNTWTTKTILSDGHKRTIREIR 66
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WSPCG ++ASASFD TTA+W K SG+FECNATLEGHENEVKSV+WS++G LATCSRDKS
Sbjct: 67 WSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKS 126
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
VW+WEV +DE+ECAAV+N H QDVK+V +HP +LASASYD+T+K+F ED ++DW
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKELLASASYDNTIKMFAEDALDSDWDC 186
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 284
ATL SHTSTVWS+ FD G RL +CSDD ++KIW+ Y PGN AG+ TPD +VWKCVCT
Sbjct: 187 VATLSSHTSTVWSIDFDATGERLVSCSDDTSLKIWQAYHPGNDAGVATPDKQTVWKCVCT 246
Query: 285 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD 344
+SG H R IYD+SWC LT+LIATACGDD IRIFKE ++ D +F+ + E AH+QD
Sbjct: 247 ISGQHSRAIYDVSWCKLTNLIATACGDDGIRIFKETSDS-KRDEPTFEQLTAEEGAHDQD 305
Query: 345 VNCVAWNPVVPGMLASCSDDGDVKLWQI 372
VN V WNPVV G L SCSDDG +K+W++
Sbjct: 306 VNSVEWNPVVEGQLISCSDDGTIKVWKM 333
Score = 246 (91.7 bits), Expect = 8.1e-21, P = 8.1e-21
Identities = 61/208 (29%), Positives = 104/208 (50%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
G+ TL+GH+ + V W G A+C DK++ +W + + + H +
Sbjct: 2 GRLNLEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRT 61
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
++++R+ P LASAS+D T ++ + E + N ATL+ H + V S+++ R G LA
Sbjct: 62 IREIRWSPCGQYLASASFDGTTAIWSKSSGEFE-CN-ATLEGHENEVKSVSWSRSGGLLA 119
Query: 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308
TCS D +V IW+ AG D ++C L+ H + + + W +L+A+A
Sbjct: 120 TCSRDKSVWIWEV------AG------DDEFECAAVLNPHT-QDVKRVVWHPTKELLASA 166
Query: 309 CGDDAIRIFKENPEAGDSDMVSFDLVHT 336
D+ I++F E+ D D V+ HT
Sbjct: 167 SYDNTIKMFAEDALDSDWDCVATLSSHT 194
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
Identities = 208/333 (62%), Positives = 260/333 (78%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GNTWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+N H QDVK+V +HP ++LASASYD+T+K+F E+ +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPID 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
DW ATL SHTSTVW + FD G RL +CSDD T+KIWK Y PGN+AG+ TP+ +VW
Sbjct: 182 NDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWKAYHPGNTAGVATPEQQTVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCT+SG H R IYD+SWC LT LIATACGDD IRIFKE ++ D +F+ + E
Sbjct: 242 KCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDS-KPDEPTFEQITAEEG 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
Score = 245 (91.3 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 61/208 (29%), Positives = 103/208 (49%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
G+ TL+GH+ + V W G A+C DK++ +W + + + H +
Sbjct: 2 GRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRT 61
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
++++R+ P LASAS+D T ++ + E + N ATL+ H + V S+++ R G LA
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFE-CN-ATLEGHENEVKSVSWSRSGGLLA 119
Query: 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308
TCS D +V IW+ AG D ++C L+ H + + + W D++A+A
Sbjct: 120 TCSRDKSVWIWEV------AG------DDEFECAAVLNPHT-QDVKRVVWHPTKDVLASA 166
Query: 309 CGDDAIRIFKENPEAGDSDMVSFDLVHT 336
D+ I++F E P D D + HT
Sbjct: 167 SYDNTIKMFAEEPIDNDWDCTATLTSHT 194
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
Identities = 210/332 (63%), Positives = 266/332 (80%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q L GH+GRVW W+P+ ++++CGEDK IR+W + G ++ K +LSDGH RTIR+
Sbjct: 8 QCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTG-RWVPKTVLSDGHTRTIRDV 66
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWSPCG F+ASASFDAT A+WD+RSG+FECNATLEGHENEVKSV+WSK+G LATCSRDK
Sbjct: 67 AWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDK 126
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVW+WEV +EDEYECAAV+N H QDVKKV +HP +++LASASYD+T++L++ED A++DW
Sbjct: 127 SVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTIQLYREDLADSDWS 186
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS-VWKCV 282
+F TL SH STVWS+AFD GSRLA+CSDD TV+IW+EYKPGN G+ PD + VWKCV
Sbjct: 187 SFDTLASHDSTVWSIAFDASGSRLASCSDDQTVRIWQEYKPGNEFGVACPDGKTPVWKCV 246
Query: 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD-SDMVSFDLVHTEHRAH 341
CTLSG H R +YDISWC T LIATACGDD +RIF+E AG ++ +F++V ++H AH
Sbjct: 247 CTLSGFHSRAVYDISWCKKTGLIATACGDDMVRIFRE--VAGSPANEPTFEMVASKH-AH 303
Query: 342 NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
+QD N V W+P V G+L + SDDGDVKLW+ +
Sbjct: 304 SQDANTVEWSPTVAGLLVTTSDDGDVKLWKFE 335
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 1197 (426.4 bits), Expect = 1.1e-121, P = 1.1e-121
Identities = 207/333 (62%), Positives = 259/333 (77%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN + K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GNTWGTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+N H QDVK+V +HP ++LASASYD+T+K+F E+ +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPID 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
DW ATL SHTSTVW + FD G RL +CSDD T+KIW+ Y PGN+AG+ TP+ +VW
Sbjct: 182 NDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATPEQQTVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCT+SG H R IYD+SWC LT LIATACGDD IRIFKE ++ D +F+ + E
Sbjct: 242 KCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDS-KPDEPTFEQITAEEG 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
Score = 244 (91.0 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 61/208 (29%), Positives = 103/208 (49%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
G+ TL+GH+ + V W G A+C DK++ +W + + + H +
Sbjct: 2 GRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWGTKTILSDGHKRT 61
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
++++R+ P LASAS+D T ++ + E + N ATL+ H + V S+++ R G LA
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFE-CN-ATLEGHENEVKSVSWSRSGGLLA 119
Query: 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308
TCS D +V IW+ AG D ++C L+ H + + + W D++A+A
Sbjct: 120 TCSRDKSVWIWEV------AG------DDEFECAAVLNPHT-QDVKRVVWHPTKDVLASA 166
Query: 309 CGDDAIRIFKENPEAGDSDMVSFDLVHT 336
D+ I++F E P D D + HT
Sbjct: 167 SYDNTIKMFAEEPIDNDWDCTATLTSHT 194
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
Identities = 211/334 (63%), Positives = 258/334 (77%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G +SCGEDK IR+W GN +T K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLS--GNTWTTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K EC ATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREVRWSPCGEYLASASFDATTAIWSKH----ECTATLEGHENEVKSVSWSRSGGLLATC 117
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+NAH QDVK+V +HP ILASASYD+T+K++ E +
Sbjct: 118 SRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEILASASYDNTIKMYAESALD 177
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
+DW ATL SHTSTVWS+ FD G RL +CSDDAT+KIW+ Y PGN AGI TPD +VW
Sbjct: 178 SDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDATLKIWRAYHPGNEAGIATPDKTTVW 237
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCTLSG H R IYD+SWC LT LIA+ACGDDAIRIFKE+ ++ D SF+L+ +E
Sbjct: 238 KCVCTLSGLHTRAIYDVSWCKLTGLIASACGDDAIRIFKESSDS-KRDAPSFELLTSEES 296
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH QDVN V WNPV G L SCSDDG +K+W+++
Sbjct: 297 AHEQDVNAVEWNPVNVGQLISCSDDGTIKIWKLQ 330
Score = 193 (73.0 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 41/132 (31%), Positives = 69/132 (52%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
G+ TL+GH+ + V W G A+C DK++ +W + + + H +
Sbjct: 2 GRLILEHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRT 61
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
+++VR+ P LASAS+D T ++ + + A TL+ H + V S+++ R G LA
Sbjct: 62 IREVRWSPCGEYLASASFDATTAIWSKHECTA------TLEGHENEVKSVSWSRSGGLLA 115
Query: 249 TCSDDATVKIWK 260
TCS D +V IW+
Sbjct: 116 TCSRDKSVWIWE 127
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 1173 (418.0 bits), Expect = 3.7e-119, P = 3.7e-119
Identities = 205/334 (61%), Positives = 257/334 (76%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G +SCGEDK IR+W + GN +T K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQS--GNTWTTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K ECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREVRWSPCGEYLASASFDATTAIWSKH----ECNATLEGHENEVKSVSWSQSGGLLATC 117
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+NAH QDVK+V +HP ILASASYD+T+K++ E +
Sbjct: 118 SRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSKEILASASYDNTIKMYAESALD 177
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
+DW ATL SHTSTVWS+ F+ G RL +CSDD T+KIW+ Y PGN AGI TPD +VW
Sbjct: 178 SDWDCTATLSSHTSTVWSIDFEADGERLVSCSDDTTLKIWRAYHPGNEAGIATPDKTTVW 237
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCT++G H R +YD+SWC LT LIA+ACGDD IRIFKE+ ++ D +F+L+ E
Sbjct: 238 KCVCTVAGQHSRAVYDVSWCKLTGLIASACGDDGIRIFKESSDS-KRDEPTFELLTAEES 296
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH QDVN V WNPV G L SCSDDG +K+W+++
Sbjct: 297 AHEQDVNAVEWNPVTAGQLISCSDDGTIKIWKLQ 330
Score = 188 (71.2 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 42/132 (31%), Positives = 69/132 (52%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
G+ TL+GH+ + V W G A+C DK++ +W + + H +
Sbjct: 2 GRLILEHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRT 61
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
+++VR+ P LASAS+D T ++ K E + ATL+ H + V S+++ + G LA
Sbjct: 62 IREVRWSPCGEYLASASFDATTAIWS--KHECN----ATLEGHENEVKSVSWSQSGGLLA 115
Query: 249 TCSDDATVKIWK 260
TCS D +V IW+
Sbjct: 116 TCSRDKSVWIWE 127
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 1172 (417.6 bits), Expect = 4.7e-119, P = 4.7e-119
Identities = 208/334 (62%), Positives = 254/334 (76%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G +SCGEDK IR+W GN +T K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLS--GNTWTTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K EC ATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREVRWSPCGEYLASASFDATTAIWSKH----ECTATLEGHENEVKSVSWSRSGGLLATC 117
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+NAH QDVK+V +HP +LASASYD+T+K+F E +
Sbjct: 118 SRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEVLASASYDNTIKMFAESALD 177
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
+DW ATL SHTSTVWS+ FD G RL +CSDDAT+KIW+ Y PGN AGI TPD +VW
Sbjct: 178 SDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDATLKIWRAYHPGNDAGIATPDKTTVW 237
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCTLSG H R IYD+SWC T LIA+ACGDD IRIFKE ++ D +F+L+ E
Sbjct: 238 KCVCTLSGEHSRAIYDVSWCKQTGLIASACGDDGIRIFKECSDS-KRDAPTFELLTAEES 296
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH QDVN V WNPV G L SCSDDG +K+W+++
Sbjct: 297 AHEQDVNAVEWNPVTAGQLISCSDDGTIKIWKLQ 330
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 1158 (412.7 bits), Expect = 1.4e-117, P = 1.4e-117
Identities = 198/332 (59%), Positives = 265/332 (79%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
QTL GH GRVW+ +W+P G + +SCGEDK IR+W K S +++ A+ +L+DGH RTIRE
Sbjct: 8 QTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNK-SDTDRWVAQTVLTDGHTRTIREL 66
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWS CG+++ASASFD T AVWDK+SG+FECNATLEGH+NEVKSVTWS++G LATCSRDK
Sbjct: 67 AWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLLATCSRDK 126
Query: 164 SVWVWEV----GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SVW+WE+ +EDEYEC AV+N H QDVKKV +HP +++LASASYD+T++++++D A+
Sbjct: 127 SVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQEDLLASASYDNTIRMYRQDLAD 186
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
++W L+SH+STVWS++FD G RLA+CS+D TVK+W++Y P N+ GIP PD ++W
Sbjct: 187 SEWEMLEPLESHSSTVWSISFDATGQRLASCSEDTTVKVWQQYGPDNALGIPCPDRGTIW 246
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCTLSG+H R++YDI WC T L+ATACGDD +RIF+E ++ D + +F+LV T
Sbjct: 247 KCVCTLSGYHSRSVYDIDWCKQTGLLATACGDDTVRIFREASDS-DRNEPTFELVVTVE- 304
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371
AH+QD N VAW+P VPG+L + SDDG++KLWQ
Sbjct: 305 AHSQDANKVAWHPTVPGLLLTASDDGEIKLWQ 336
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 74/259 (28%), Positives = 127/259 (49%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQ 187
G+ E TL GH V S W G+ A+C DK++ VW + D + V+ + H +
Sbjct: 2 GKLELLQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTR 61
Query: 188 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247
++++ + + LASAS+D TV ++ DK ++ ATL+ H + V S+ + R G+ L
Sbjct: 62 TIRELAWSCCGHYLASASFDTTVAVW--DKKSGEFECNATLEGHDNEVKSVTWSRSGNLL 119
Query: 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 307
ATCS D +V IW+ + PD + ++CV L+GH + + + W DL+A+
Sbjct: 120 ATCSRDKSVWIWEIHH--------APDQEDEYECVAVLNGHT-QDVKKVCWHPQEDLLAS 170
Query: 308 ACGDDAIRIFKEN----------P-EAGDSDM--VSFDLVHTEHRAHNQDVNCVAWNPVV 354
A D+ IR+++++ P E+ S + +SFD + ++D W
Sbjct: 171 ASYDNTIRMYRQDLADSEWEMLEPLESHSSTVWSISFDATGQRLASCSEDTTVKVWQQYG 230
Query: 355 P--GMLASCSDDGDVKLWQ 371
P + C D G + W+
Sbjct: 231 PDNALGIPCPDRGTI--WK 247
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 1154 (411.3 bits), Expect = 3.8e-117, P = 3.8e-117
Identities = 200/320 (62%), Positives = 248/320 (77%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
R W ++WNP GT+++SCG D+ IR+WG E G+ + K++LS+GHQRT+R+ AWSPCGN+
Sbjct: 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTE--GDSWICKSVLSEGHQRTVRKVAWSPCGNY 75
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
+ASASFDATT +W K FEC TLEGHENEVKSV W+ +G LATCSRDKSVWVWEV
Sbjct: 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 231
EEDEYEC +V+N+H QDVK V +HP +LASASYDDTVKL++E+ E DW+ ATL+ H
Sbjct: 136 EEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE--EDDWVCCATLEGH 193
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 291
STVWSLAFD G RLA+CSDD TV+IW++Y PGN G+ +D WKC+CTLSG H R
Sbjct: 194 ESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSR 253
Query: 292 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 351
TIYDI+WC LT +ATACGDDAIR+F+E+P + D +F L H+AH+QDVNCVAWN
Sbjct: 254 TIYDIAWCQLTGALATACGDDAIRVFQEDPNS-DPQQPTFSLTAHLHQAHSQDVNCVAWN 312
Query: 352 PVVPGMLASCSDDGDVKLWQ 371
P PG+LASCSDDG+V W+
Sbjct: 313 PKEPGLLASCSDDGEVAFWK 332
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 83/301 (27%), Positives = 145/301 (48%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQ 97
C+ + S+ GHQ V V+W+P G ++S D +W K + F L +GH+
Sbjct: 52 CKSVLSE---GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQ--DDFECVTTL-EGHE 105
Query: 98 RTIRETAWSPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
++ AW+P GN +A+ S D + VW+ ++EC + L H +VK V W + + L
Sbjct: 106 NEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE- 215
A+ S D +V ++ EED++ C A + H V + F P LAS S D TV+++++
Sbjct: 166 ASASYDDTVKLYRE-EEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224
Query: 216 ----------DKAEADWINFATLKS-HTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYK 263
++ W TL H+ T++ +A+ ++ LAT C DDA +++++E
Sbjct: 225 LPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA-IRVFQE-D 282
Query: 264 PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA-IRIFK-ENP 321
P + PT + L H + + ++W + +C DD + +K + P
Sbjct: 283 PNSDPQQPT------FSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336
Query: 322 E 322
E
Sbjct: 337 E 337
Score = 123 (48.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333
+ DS W C LS H RT+ ++W + +A+A D I+K+N + F+
Sbjct: 46 EGDS-WICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD-------DFEC 97
Query: 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376
V T H +V VAW P +LA+CS D V +W++ E+
Sbjct: 98 V-TTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEED 138
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 1131 (403.2 bits), Expect = 1.0e-114, P = 1.0e-114
Identities = 196/329 (59%), Positives = 250/329 (75%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S+ L R W ++WNP GT+++SCG D+++R+WG+E G+ + K++L +GHQRT+R+
Sbjct: 9 SRILAHPDSRCWFLAWNPAGTLLASCGGDRSVRIWGRE--GDSWICKSVLCEGHQRTVRK 66
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
AWSPCGN++ASASFDATT +W K FEC TLEGHENEVKSV W+ +G LATCSRD
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD 126
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
KSVWVWEV EEDEYEC +V+N+H QDVK V +HP +LASASYDDTVKL++E+ E DW
Sbjct: 127 KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE--EDDW 184
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282
+ ATL+ H STVWSLAFD G RLA+CSDD TV+IW++Y PGN G+ +++ WKCV
Sbjct: 185 VCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSEASWKCV 244
Query: 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN 342
CTLSG H RTIYD++WC LT +ATACGDDAIR+F+E+P D +F L +AH+
Sbjct: 245 CTLSGFHSRTIYDVAWCQLTGTLATACGDDAIRVFEEDP-GSDPQQPTFSLTAHVPQAHS 303
Query: 343 QDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371
QDVNCVAWNP G+LASCSDDG++ W+
Sbjct: 304 QDVNCVAWNPKERGLLASCSDDGELAFWK 332
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 32/103 (31%), Positives = 50/103 (48%)
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333
+ DS W C L H RT+ ++W + +A+A D I+K+N + F+
Sbjct: 46 EGDS-WICKSVLCEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNED-------DFEC 97
Query: 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376
V T H +V VAW P +LA+CS D V +W++ E+
Sbjct: 98 V-TTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEED 138
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
Identities = 195/320 (60%), Positives = 245/320 (76%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
R W ++WNP GT+++SCG D+ IR+WG E G+ + K++LS+GHQRT+R+ AWSPCGN+
Sbjct: 18 RCWFLAWNPSGTLLASCGGDRKIRIWGTE--GDSWICKSVLSEGHQRTVRKVAWSPCGNY 75
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
+ASASFDATT +W K FEC TLEGHENEVKSV W+ +G LATCSRDKSVWVWEV
Sbjct: 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 231
EEDEYEC +V+++H QDVK V +HP +LASASYDDTVKL++E+ DW+ ATL+ H
Sbjct: 136 EEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGD--DWVCCATLEGH 193
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 291
STVWS+AFD G RLA+CSDD TV+IW++Y PGN G+ +D WKC+CTLSG H R
Sbjct: 194 ESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHTR 253
Query: 292 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 351
TIYD++WC LT +ATACGDDAIR+F+E+P D +F L +AH+QDVNCVAWN
Sbjct: 254 TIYDVAWCQLTGALATACGDDAIRVFEEDP-GSDPQQPTFSLTAHLRQAHSQDVNCVAWN 312
Query: 352 PVVPGMLASCSDDGDVKLWQ 371
P PG+LASCSDDG+V W+
Sbjct: 313 PKEPGLLASCSDDGEVAFWE 332
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 83/302 (27%), Positives = 146/302 (48%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQ 97
C+ + S+ GHQ V V+W+P G ++S D +W K + F L +GH+
Sbjct: 52 CKSVLSE---GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQ--DDFECVTTL-EGHE 105
Query: 98 RTIRETAWSPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
++ AW+P GN +A+ S D + VW+ ++EC + L H +VK V W + + L
Sbjct: 106 NEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELL 165
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE- 215
A+ S D +V +++ E D++ C A + H V + F P LAS S D TV+++++
Sbjct: 166 ASASYDDTVKLYQE-EGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQY 224
Query: 216 ----------DKAEADWINFATLKS-HTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYK 263
++ W TL HT T++ +A+ ++ LAT C DDA +++++E
Sbjct: 225 LPGNEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQLTGALATACGDDA-IRVFEE-D 282
Query: 264 PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA-IRIFKENPE 322
PG+ PT + L H + + ++W + +C DD + ++ +
Sbjct: 283 PGSDPQQPT------FSLTAHLRQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWEYHQP 336
Query: 323 AG 324
AG
Sbjct: 337 AG 338
Score = 123 (48.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333
+ DS W C LS H RT+ ++W + +A+A D I+K+N + F+
Sbjct: 46 EGDS-WICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD-------DFEC 97
Query: 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376
V T H +V VAW P +LA+CS D V +W++ E+
Sbjct: 98 V-TTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEED 138
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
Identities = 199/326 (61%), Positives = 247/326 (75%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
+ GH+ RVW+V+W+P G +++SCG DK IR+WGKE G+K+ K IL DGHQRTIR W
Sbjct: 1 MTGHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKE--GDKWICKTILEDGHQRTIRSLGW 58
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
SPCG F+ASASFDATT +WD++SG+FECNATLEGHENEVKSV WS +G LATC RDKSV
Sbjct: 59 SPCGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSV 118
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
W+WEV E+DEYECA+VI++H QDVKKV +HP ILAS SYDDT+KL+KED E DW
Sbjct: 119 WIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYKED--EDDWSCC 176
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285
TL+ H STVWS++FD G R+ +CSDD TV+IWK Y PGN G+ + WKCVC L
Sbjct: 177 DTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVL 236
Query: 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDV 345
SG+H RTIYD+ W ++ LIATA GDD IRIFKE+ + D + SF LV T+ +AH+ DV
Sbjct: 237 SGYHDRTIYDVHWSKVSGLIATASGDDCIRIFKEDTNS-DRNQPSFQLVATQRKAHSMDV 295
Query: 346 NCVAWNPVVPGMLASCSDDGDVKLWQ 371
N + W+P +LA+CSDDG VKLW+
Sbjct: 296 NSICWHPKDENILATCSDDGTVKLWR 321
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 58/214 (27%), Positives = 120/214 (56%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH+ V +V W+ G+++++CG DK++ +W + +++ +++ H + +++
Sbjct: 89 TLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQE-DDEYECASVIHS-HTQDVKKVV 146
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
W P +AS S+D T ++ + + C TLEGHE+ V S+++ +G + +CS DK+
Sbjct: 147 WHPTKEILASCSYDDTIKLYKEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKT 206
Query: 165 VWVWEV------------GEEDEYECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVK 211
V +W+ G+ +++C V++ H + + V + ++A+AS DD ++
Sbjct: 207 VRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDDCIR 266
Query: 212 LFKED-KAEADWINF---ATL-KSHTSTVWSLAF 240
+FKED ++ + +F AT K+H+ V S+ +
Sbjct: 267 IFKEDTNSDRNQPSFQLVATQRKAHSMDVNSICW 300
Score = 123 (48.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 35/115 (30%), Positives = 54/115 (46%)
Query: 69 GEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW---- 124
G + + + GK + K+ +LS H RTI + WS IA+AS D ++
Sbjct: 216 GNQEGVVVSGKHT---KWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDDCIRIFKEDT 272
Query: 125 --DKRSGQFECNATL-EGHENEVKSVTWS-KNGQFLATCSRDKSVWVWEVGEEDE 175
D+ F+ AT + H +V S+ W K+ LATCS D +V +W +E
Sbjct: 273 NSDRNQPSFQLVATQRKAHSMDVNSICWHPKDENILATCSDDGTVKLWRFTPAEE 327
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 36/141 (25%), Positives = 63/141 (44%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ + H V V W+P +++SC D I+L+ KE + + +GH+ T+
Sbjct: 132 ASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLY-KEDEDDWSCCDTL--EGHESTVWS 188
Query: 103 TAWSPCGNFIASASFDATTAVWDKR----------SGQ---FECNATLEG-HENEVKSVT 148
++ G+ I S S D T +W SG+ ++C L G H+ + V
Sbjct: 189 ISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVH 248
Query: 149 WSKNGQFLATCSRDKSVWVWE 169
WSK +AT S D + +++
Sbjct: 249 WSKVSGLIATASGDDCIRIFK 269
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 32/98 (32%), Positives = 50/98 (51%)
Query: 130 QFECNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE-----YECAAVIN 183
+++C L G H+ + V WSK +AT S D + +++ + ++ A
Sbjct: 229 KWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDDCIRIFKEDTNSDRNQPSFQLVATQR 288
Query: 184 -AHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAE 219
AH DV + +HP D NILA+ S D TVKL++ AE
Sbjct: 289 KAHSMDVNSICWHPKDENILATCSDDGTVKLWRFTPAE 326
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
Identities = 196/320 (61%), Positives = 244/320 (76%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
R W ++WNP GT+++SCG D+ IR+WG E G+ + K++LS+GHQRT+R+ AWSPCGN+
Sbjct: 18 RCWFLAWNPTGTLLASCGGDRKIRIWGTE--GDSWICKSVLSEGHQRTVRKVAWSPCGNY 75
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
+ASASFDATT +W K FEC TLEGHENEVKSV W+ +G LATCSRDKSVWVWEV
Sbjct: 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 231
EEDEYEC +V+N+H QDVK V +HP +LASASYDDTVKL++E+ DW+ ATL+ H
Sbjct: 136 EEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGD--DWVCCATLEGH 193
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 291
STVWS+AFD G RLA+CSDD TV+IW++Y PGN G+ +D WKCVCTLSG H R
Sbjct: 194 ESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCVCTLSGFHTR 253
Query: 292 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 351
TIYD++WC LT +ATACGDDAIR+F+E+P D +F L +AH+QDVNCVAWN
Sbjct: 254 TIYDVAWCQLTGALATACGDDAIRVFEEDP-GSDPQQPTFSLTAHLRQAHSQDVNCVAWN 312
Query: 352 PVVPGMLASCSDDGDVKLWQ 371
P G+LASCSDDG+V W+
Sbjct: 313 PKEAGLLASCSDDGEVAFWE 332
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 83/302 (27%), Positives = 146/302 (48%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQ 97
C+ + S+ GHQ V V+W+P G ++S D +W K + F L +GH+
Sbjct: 52 CKSVLSE---GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQ--DDFECVTTL-EGHE 105
Query: 98 RTIRETAWSPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
++ AW+P GN +A+ S D + VW+ ++EC + L H +VK V W + + L
Sbjct: 106 NEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE- 215
A+ S D +V +++ E D++ C A + H V + F P LAS S D TV+++++
Sbjct: 166 ASASYDDTVKLYQE-EGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQY 224
Query: 216 ----------DKAEADWINFATLKS-HTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYK 263
++ W TL HT T++ +A+ ++ LAT C DDA +++++E
Sbjct: 225 LPGNEQGVACSGSDPSWKCVCTLSGFHTRTIYDVAWCQLTGALATACGDDA-IRVFEE-D 282
Query: 264 PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA-IRIFKENPE 322
PG+ PT + L H + + ++W + +C DD + ++ +
Sbjct: 283 PGSDPQQPT------FSLTAHLRQAHSQDVNCVAWNPKEAGLLASCSDDGEVAFWEYHQP 336
Query: 323 AG 324
AG
Sbjct: 337 AG 338
Score = 123 (48.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333
+ DS W C LS H RT+ ++W + +A+A D I+K+N + F+
Sbjct: 46 EGDS-WICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD-------DFEC 97
Query: 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376
V T H +V VAW P +LA+CS D V +W++ E+
Sbjct: 98 V-TTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEED 138
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
Identities = 188/320 (58%), Positives = 243/320 (75%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
R W ++WNP GT+++SCG D+ IR+WGK+ G+ + K++L +GHQRT+R+ +WSPCGN+
Sbjct: 18 RCWFLAWNPSGTLLASCGGDRTIRIWGKD--GDNWVCKSVLGEGHQRTVRKVSWSPCGNY 75
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
+ASASFDATT +W K+ +FEC TLEGHENEVKSV W+ +G LATCSRDKSVWVWEV
Sbjct: 76 LASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVD 135
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 231
EE+EYEC +V+N+H QDVK V +HP +LASASYDD+VKL++E+ E DW+ ATL+ H
Sbjct: 136 EEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYREE--EDDWVCCATLEGH 193
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 291
TSTVWSLAFD+ G +LATCSDD TV+IW++ G P+ WKCVCTL+G+H R
Sbjct: 194 TSTVWSLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSKSDPN----WKCVCTLTGYHTR 249
Query: 292 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 351
T+YD++W HLT IATACGDDA+RIF+E+P D +F L RAH QDVNCV W+
Sbjct: 250 TVYDVNWNHLTGAIATACGDDAVRIFEEDP-GSDPLQPTFSLTAHMPRAHTQDVNCVTWH 308
Query: 352 PVVPGMLASCSDDGDVKLWQ 371
P P +LASCSDDG++ W+
Sbjct: 309 PKEPNLLASCSDDGEMAFWR 328
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 84/288 (29%), Positives = 141/288 (48%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
+GHQ V VSW+P G ++S D +W K+ +F L +GH+ ++ AW+
Sbjct: 58 EGHQRTVRKVSWSPCGNYLASASFDATTCIWMKKK--EEFECITTL-EGHENEVKSVAWA 114
Query: 107 PCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
P G+ +A+ S D + VW+ ++EC + L H +VK V W N + LA+ S D SV
Sbjct: 115 PSGSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDSV 174
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE-------DKA 218
++ EED++ C A + H V + F LA+ S D TV+++++ K+
Sbjct: 175 KLYRE-EEDDWVCCATLEGHTSTVWSLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSKS 233
Query: 219 EADWINFATLKS-HTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDND 276
+ +W TL HT TV+ + ++ + +AT C DDA V+I++E PG+ PT
Sbjct: 234 DPNWKCVCTLTGYHTRTVYDVNWNHLTGAIATACGDDA-VRIFEE-DPGSDPLQPT---- 287
Query: 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF--KENPE 322
+ + H + + ++W + +C DD F + PE
Sbjct: 288 --FSLTAHMPRAHTQDVNCVTWHPKEPNLLASCSDDGEMAFWRYQKPE 333
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 69/236 (29%), Positives = 128/236 (54%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH+ V +V+W P G+++++C DK++ +W + ++ ++L+ H + ++
Sbjct: 100 TLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDE-EEEYECVSVLNS-HTQDVKHVV 157
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
W P +ASAS+D + ++ + + C ATLEGH + V S+ + + G+ LATCS DK+
Sbjct: 158 WHPNQELLASASYDDSVKLYREEEDDWVCCATLEGHTSTVWSLAFDQTGEQLATCSDDKT 217
Query: 165 VWVWE---VGEEDE-----YECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKE 215
V +W GE+ ++C + H + V V ++ +A+A DD V++F+E
Sbjct: 218 VRIWRQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYDVNWNHLTGAIATACGDDAVRIFEE 277
Query: 216 DKAEADWIN--FATL----KSHTSTVWSLAFD-RIGSRLATCSDDATVKIWKEYKP 264
D +D + F+ ++HT V + + + + LA+CSDD + W+ KP
Sbjct: 278 DPG-SDPLQPTFSLTAHMPRAHTQDVNCVTWHPKEPNLLASCSDDGEMAFWRYQKP 332
Score = 113 (44.8 bits), Expect = 0.00094, P = 0.00094
Identities = 31/102 (30%), Positives = 47/102 (46%)
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333
D D+ W C L H RT+ +SW + +A+A D I+ + E F+
Sbjct: 46 DGDN-WVCKSVLGEGHQRTVRKVSWSPCGNYLASASFDATTCIWMKKKE-------EFEC 97
Query: 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
+ T H +V VAW P +LA+CS D V +W++ E
Sbjct: 98 I-TTLEGHENEVKSVAWAPS-GSLLATCSRDKSVWVWEVDEE 137
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 188/329 (57%), Positives = 239/329 (72%)
Query: 44 QTLKGH-QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
Q H R W V+WNP+GT+++SCG D+ IR+WG+E G+ + K +L DGHQRT+R+
Sbjct: 9 QKFNAHPDSRCWYVAWNPKGTLLASCGGDRTIRIWGRE--GDSWECKTVLQDGHQRTVRK 66
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
AWSPCGN++ASASFDATT +W K++ FEC LEGHENEVK V W+ +G LATCSRD
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRD 126
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
KSVW+WEV EE+EYEC +V+N+H QDVK V +HP +LAS SYD+ V ++KE+ + DW
Sbjct: 127 KSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEE--DDDW 184
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP-GNSAGIPTPDNDSVWKC 281
ATL+ HTSTVW L FD G RLA+CSDD TVKIWKE +P G G D+ WKC
Sbjct: 185 ECRATLEGHTSTVWGLTFDPSGQRLASCSDDCTVKIWKECQPEGGQEG-----TDAAWKC 239
Query: 282 VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 341
VCTLSG HGRT+YDI+WC LT +ATACGDD +R+FKE+ E D D +F L +AH
Sbjct: 240 VCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFKED-ETADPDQPAFSLSAHVPKAH 298
Query: 342 NQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
QDVNC+AW+P G+L SCSD+G++ +W
Sbjct: 299 TQDVNCIAWHPKEAGLLVSCSDNGEIAVW 327
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333
+ DS W+C L H RT+ ++W + +A+A D I+K+ + F+
Sbjct: 46 EGDS-WECKTVLQDGHQRTVRKVAWSPCGNYLASASFDATTCIWKKKND-------DFEC 97
Query: 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376
+ T H +V CVAW P +LA+CS D V +W++ EN
Sbjct: 98 L-TVLEGHENEVKCVAWAPS-GNLLATCSRDKSVWIWEVDEEN 138
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 188/333 (56%), Positives = 239/333 (71%)
Query: 44 QTLKGH-QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
Q H R W V+WNP+GT+++SCG D+ IR+WG+E G+ + K +L DGHQR +R+
Sbjct: 9 QKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGRE--GDSWECKTVLQDGHQRAVRK 66
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
AWSPCGN++ASASFDATT +W K++ FEC LEGHENEVK V W+ +G LATCSRD
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRD 126
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
KSVW+WEV EEDEYEC +V+N+H QDVK V +HP +LAS SYD+ V ++KE+ + DW
Sbjct: 127 KSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEE--DDDW 184
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282
ATL+ HTSTVW L FD G RLA+CSDD TVKIWKE +PG D+ WKCV
Sbjct: 185 ECRATLEGHTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGG-------QDTAWKCV 237
Query: 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN 342
CTLSG HGRT+YDI+WC LT +ATACGDD +R+FKE+ E D D F L +AH+
Sbjct: 238 CTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFKED-ETADPDQPVFSLSAHVPKAHS 296
Query: 343 QDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
QDVNC+AW+P G+L SCSD+G++ +W + E
Sbjct: 297 QDVNCIAWHPKEAGLLVSCSDNGEIAVWNYQSE 329
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 30/103 (29%), Positives = 49/103 (47%)
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333
+ DS W+C L H R + ++W + +A+A D I+K+ + F+
Sbjct: 46 EGDS-WECKTVLQDGHQRAVRKVAWSPCGNYLASASFDATTCIWKKKND-------DFEC 97
Query: 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376
+ T H +V CVAW P LA+CS D V +W++ E+
Sbjct: 98 L-TVLEGHENEVKCVAWAPS-GNQLATCSRDKSVWIWEVDEED 138
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
Identities = 183/320 (57%), Positives = 236/320 (73%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
R W ++WNP GT+++SCG D+++R+WG+E G+ + K++L +GHQRT+R+ AWSPCGN+
Sbjct: 18 RCWFLAWNPAGTLLASCGGDRSVRIWGRE--GDSWICKSVLCEGHQRTVRKVAWSPCGNY 75
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
+ASASFDATT +W K FEC TLEGHENEVKSV W+ +G LATCSRDKSVWVWE
Sbjct: 76 LASASFDATTCIWKKNKDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEGT 135
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 231
E++ + Q +KKV +HP +LASASYDDTVKL++E+ E DW+ ATL+ H
Sbjct: 136 VENQPSDPTRVPYKPQSMKKVLWHPSQELLASASYDDTVKLYREE--EDDWVCCATLEGH 193
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 291
STVWSLAFD G RLA+CSDD TV+IW++Y PGN G+ +D WKC+CTLSG H R
Sbjct: 194 ESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACNGSDPSWKCICTLSGFHSR 253
Query: 292 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 351
TIYD++WC LT +ATACGDDAIR+F+E+P D +F L +AH+QDVNCVAWN
Sbjct: 254 TIYDVAWCQLTGALATACGDDAIRVFEEDP-GSDPQQPTFSLTAHLPQAHSQDVNCVAWN 312
Query: 352 PVVPGMLASCSDDGDVKLWQ 371
P G+LASCSDDG++ W+
Sbjct: 313 PKEQGLLASCSDDGELAFWK 332
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 77/290 (26%), Positives = 138/290 (47%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
+GHQ V V+W+P G ++S D +W K + F L +GH+ ++ AW+
Sbjct: 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNK--DDFECVTTL-EGHENEVKSVAWA 114
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSRDKSV 165
P GN +A+ S D + VW+ + T ++ + +K V W + + LA+ S D +V
Sbjct: 115 PSGNLLATCSRDKSVWVWEGTVENQPSDPTRVPYKPQSMKKVLWHPSQELLASASYDDTV 174
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE---------- 215
++ EED++ C A + H V + F P LAS S D TV+++++
Sbjct: 175 KLYRE-EEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVA 233
Query: 216 -DKAEADWINFATLKS-HTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPT 272
+ ++ W TL H+ T++ +A+ ++ LAT C DDA +++++E PG+ PT
Sbjct: 234 CNGSDPSWKCICTLSGFHSRTIYDVAWCQLTGALATACGDDA-IRVFEE-DPGSDPQQPT 291
Query: 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA-IRIFKENP 321
+ L H + + ++W + +C DD + +K P
Sbjct: 292 ------FSLTAHLPQAHSQDVNCVAWNPKEQGLLASCSDDGELAFWKYQP 335
Score = 246 (91.7 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 54/185 (29%), Positives = 101/185 (54%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH+ V +V+W P G ++++C DK++ +W + + N+ + + Q ++++
Sbjct: 100 TLEGHENEVKSVAWAPSGNLLATCSRDKSVWVW-EGTVENQPSDPTRVPYKPQ-SMKKVL 157
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
W P +ASAS+D T ++ + + C ATLEGHE+ V S+ + +GQ LA+CS D++
Sbjct: 158 WHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT 217
Query: 165 VWVWEV------------GEEDEYECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVK 211
V +W G + ++C ++ H + + V + LA+A DD ++
Sbjct: 218 VRIWRQYLPGNEQGVACNGSDPSWKCICTLSGFHSRTIYDVAWCQLTGALATACGDDAIR 277
Query: 212 LFKED 216
+F+ED
Sbjct: 278 VFEED 282
Score = 131 (51.2 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW-----GKESF----GNKFTAKAI--LS 93
TL+GH+ VW+++++P G ++SC +D+ +R+W G E G+ + K I LS
Sbjct: 189 TLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACNGSDPSWKCICTLS 248
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129
H RTI + AW +A+A D V+++ G
Sbjct: 249 GFHSRTIYDVAWCQLTGALATACGDDAIRVFEEDPG 284
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333
+ DS W C L H RT+ ++W + +A+A D I+K+N + F+
Sbjct: 46 EGDS-WICKSVLCEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNKD-------DFEC 97
Query: 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376
V T H +V VAW P +LA+CS D V +W+ +EN
Sbjct: 98 V-TTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEGTVEN 138
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 186/320 (58%), Positives = 234/320 (73%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
R W V+WNP GT +++CG D+ IR+WGKE G+ + K +LSDGHQRT+R+ AWSPCG +
Sbjct: 18 RCWYVAWNPAGTTLATCGGDRAIRIWGKE--GDSWECKCVLSDGHQRTVRKVAWSPCGKY 75
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
+ASASFDATT +W K FEC LEGHENEVK V W+ +G LATCSRDKSVW+WEV
Sbjct: 76 LASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVD 135
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 231
EEDEYEC +V+N+H QDVK V +HP +LASASYD+ + ++KE+ + DW ATL+ H
Sbjct: 136 EEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKICIYKEE--DDDWECRATLEGH 193
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 291
STVWSL FD G RLA+CSDD TVKIWKE G+ + +D WKC+CTLSG HGR
Sbjct: 194 ESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTGDGS------SDESWKCICTLSGFHGR 247
Query: 292 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 351
TIYDI+WC LT +ATACGDD +R+F E+P A D + F L +AHNQDVNCV+WN
Sbjct: 248 TIYDIAWCRLTGALATACGDDGVRVFSEDPTA-DPEQPIFALSAHVPKAHNQDVNCVSWN 306
Query: 352 PVVPGMLASCSDDGDVKLWQ 371
P G+LA+CSD+G+ +W+
Sbjct: 307 PKEAGLLATCSDNGEFAIWK 326
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 86/287 (29%), Positives = 139/287 (48%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GHQ V V+W+P G ++S D +W K F +L +GH+ ++ AW+P
Sbjct: 59 GHQRTVRKVAWSPCGKYLASASFDATTCIWKKTD--EDFECLTVL-EGHENEVKCVAWAP 115
Query: 108 CGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
G+ +A+ S D + +W+ ++EC + + H +VK V W + LA+ S D +
Sbjct: 116 SGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKIC 175
Query: 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED-----KAEAD 221
+++ E+D++EC A + H V + F P LAS S D TVK++KE ++
Sbjct: 176 IYKE-EDDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTGDGSSDES 234
Query: 222 WINFATLKS-HTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
W TL H T++ +A+ R+ LAT C DD V+++ E PT D +
Sbjct: 235 WKCICTLSGFHGRTIYDIAWCRLTGALATACGDDG-VRVFSED--------PTADPEQP- 284
Query: 280 KCVCTLSGH----HGRTIYDISWCHL-TDLIATACGDDA-IRIFKEN 320
+ LS H H + + +SW L+AT C D+ I+K N
Sbjct: 285 --IFALSAHVPKAHNQDVNCVSWNPKEAGLLAT-CSDNGEFAIWKYN 328
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 69/228 (30%), Positives = 126/228 (55%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L+GH+ V V+W P G+++++C DK++ +W + +++ ++++ H + ++ W
Sbjct: 101 LEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDE-EDEYECLSVVNS-HTQDVKHVVW 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
P +ASAS+D ++ + +EC ATLEGHE+ V S+T+ G+ LA+CS D++V
Sbjct: 159 HPTQELLASASYDNKICIYKEEDDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRTV 218
Query: 166 WVWEV-----GEEDE-YECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKEDK- 217
+W+ G DE ++C ++ H + + + + LA+A DD V++F ED
Sbjct: 219 KIWKESTTGDGSSDESWKCICTLSGFHGRTIYDIAWCRLTGALATACGDDGVRVFSEDPT 278
Query: 218 AEADWINFATL----KSHTSTVWSLAFD-RIGSRLATCSDDATVKIWK 260
A+ + FA K+H V ++++ + LATCSD+ IWK
Sbjct: 279 ADPEQPIFALSAHVPKAHNQDVNCVSWNPKEAGLLATCSDNGEFAIWK 326
Score = 169 (64.5 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 41/138 (29%), Positives = 73/138 (52%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTA---KAI--LSDGHQRT 99
TL+GH+ VW+++++P+G ++SC +D+ +++W + + G+ + K I LS H RT
Sbjct: 189 TLEGHESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTGDGSSDESWKCICTLSGFHGRT 248
Query: 100 IRETAWSPCGNFIASASFDATTAVW------DKRSGQFECNATL-EGHENEVKSVTWS-K 151
I + AW +A+A D V+ D F +A + + H +V V+W+ K
Sbjct: 249 IYDIAWCRLTGALATACGDDGVRVFSEDPTADPEQPIFALSAHVPKAHNQDVNCVSWNPK 308
Query: 152 NGQFLATCSRDKSVWVWE 169
LATCS + +W+
Sbjct: 309 EAGLLATCSDNGEFAIWK 326
Score = 141 (54.7 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 35/103 (33%), Positives = 53/103 (51%)
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333
+ DS W+C C LS H RT+ ++W +A+A D I+K+ D D F+
Sbjct: 46 EGDS-WECKCVLSDGHQRTVRKVAWSPCGKYLASASFDATTCIWKKT----DED---FEC 97
Query: 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376
+ T H +V CVAW P +LA+CS D V +W++ E+
Sbjct: 98 L-TVLEGHENEVKCVAWAPS-GSLLATCSRDKSVWIWEVDEED 138
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 233 STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 292
S W +A++ G+ LATC D ++IW K G+S W+C C LS H RT
Sbjct: 17 SRCWYVAWNPAGTTLATCGGDRAIRIWG--KEGDS-----------WECKCVLSDGHQRT 63
Query: 293 IYDISWCHLTDLIATACGDDAIRIFKENPE 322
+ ++W +A+A D I+K+ E
Sbjct: 64 VRKVAWSPCGKYLASASFDATTCIWKKTDE 93
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 156/347 (44%), Positives = 226/347 (65%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGT-------MISSCGEDKNIRLWGKESFGNKFTAKAI 91
E++ Q L+GH RVW+V+WNP + +++SC D +R+W + S +T K +
Sbjct: 9 ELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTV 68
Query: 92 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK 151
L + H RT+R AWSP G +A+ASFD TT +W +FEC +TLEGHENEVKSV+W+
Sbjct: 69 LEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNA 128
Query: 152 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVK 211
+G LATCSRDKSVW+WEV E +EY+CAAV+ H QDVK V++HP ++L S SYD+T+K
Sbjct: 129 SGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIK 188
Query: 212 LFKEDKAEADWINFATL----KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 267
++ + + ++ TL H+STVWS++F+ G ++ TCSDD T+KIW +
Sbjct: 189 VWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGT----DI 244
Query: 268 AGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS- 326
A + + + + W +CTLSG+H RTIY W D+IA+ GD+AIR+F ++ DS
Sbjct: 245 AKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSR-DDIIASGAGDNAIRLFVDSKH--DSV 301
Query: 327 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQI 372
D S++L+ +++AH DVN V W+P +LAS SDDG VK+WQ+
Sbjct: 302 DGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQL 348
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG----KESFGNKFTA---K 89
+C ++ GH VW++S+N G + +C +D +++WG K G ++
Sbjct: 200 QCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHL 259
Query: 90 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVW-DKRSGQFE---CNATLE---GHEN 142
LS H RTI WS + IAS + D ++ D + + N L+ HEN
Sbjct: 260 CTLSGYHDRTIYSAHWSR-DDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHEN 318
Query: 143 EVKSVTWS--KNGQFLATCSRDKSVWVWEV 170
+V SV WS + + LA+ S D V +W++
Sbjct: 319 DVNSVQWSPGEGNRLLASASDDGMVKIWQL 348
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 157/305 (51%), Positives = 202/305 (66%)
Query: 74 IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC 133
IR+W K S +++T K+IL++GH RTIR AWSPCGN++AS SFDAT +W K+ G FEC
Sbjct: 22 IRIWAKNSDSDQWTCKSILTEGHTRTIRSVAWSPCGNYLASCSFDATICIWSKKDGDFEC 81
Query: 134 NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE-YECAAVINAHIQDVKKV 192
ATLEGHENEVK V WS +G +LA+CSRDKS W+WE EEDE YECA+V+ H QDVK V
Sbjct: 82 MATLEGHENEVKCVNWSSSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHV 141
Query: 193 RFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252
+ P +N L SASYD+T+K++KE + DW TL H STVWSL+F G +C D
Sbjct: 142 VWSPKENALVSASYDNTIKIYKE--VDDDWECSHTLIGHESTVWSLSFHSSGELFVSCGD 199
Query: 253 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD 312
D +KIWK K G S D W +CT++G+H R IYD+ W L + IATACGDD
Sbjct: 200 DKVLKIWKCLKSGPS--------DVKWISICTIAGYHNRPIYDVDWSKLNNKIATACGDD 251
Query: 313 AIRIFK-ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371
AIRIF S+ + F + + ++AHN DVN V W+P V +LAS SDD +K+W+
Sbjct: 252 AIRIFSIVRITISISNQLLF-IAY--YQAHNHDVNVVRWHPKVDNILASGSDDNCIKIWK 308
Query: 372 IKLEN 376
+ N
Sbjct: 309 VHSNN 313
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 72/281 (25%), Positives = 140/281 (49%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
+GH + +V+W+P G ++SC D I +W K+ G+ F A L +GH+ ++ WS
Sbjct: 42 EGHTRTIRSVAWSPCGNYLASCSFDATICIWSKKD-GD-FECMATL-EGHENEVKCVNWS 98
Query: 107 PCGNFIASASFDATTAVWD--KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
G ++AS S D + +W+ + ++EC + L H +VK V WS L + S D +
Sbjct: 99 SSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWSPKENALVSASYDNT 158
Query: 165 VWVW-EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK---EDKAEA 220
+ ++ EV +D++EC+ + H V + FH + S D +K++K ++
Sbjct: 159 IKIYKEV--DDDWECSHTLIGHESTVWSLSFHSSGELFVSCGDDKVLKIWKCLKSGPSDV 216
Query: 221 DWINFATLKS-HTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSV 278
WI+ T+ H ++ + + ++ +++AT C DDA ++I+ + S N +
Sbjct: 217 KWISICTIAGYHNRPIYDVDWSKLNNKIATACGDDA-IRIFSIVRITISIS-----NQLL 270
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 318
+ + H+ + + W D ++A+ D+ I+I+K
Sbjct: 271 F--IAYYQAHN-HDVNVVRWHPKVDNILASGSDDNCIKIWK 308
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 62/226 (27%), Positives = 115/226 (50%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH+ V V+W+ G ++SC DK+ +W ++ ++L+D H + ++
Sbjct: 84 TLEGHENEVKCVNWSSSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTD-HSQDVKHVV 142
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WSP N + SAS+D T ++ + +EC+ TL GHE+ V S+++ +G+ +C DK
Sbjct: 143 WSPKENALVSASYDNTIKIYKEVDDDWECSHTLIGHESTVWSLSFHSSGELFVSCGDDKV 202
Query: 165 VWVWEV---GEEDE--YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
+ +W+ G D + H + + V + +N +A+A DD +++F +
Sbjct: 203 LKIWKCLKSGPSDVKWISICTIAGYHNRPIYDVDWSKLNNKIATACGDDAIRIFSIVRIT 262
Query: 220 ADWIN----FATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKIWK 260
N A ++H V + + ++ + LA+ SDD +KIWK
Sbjct: 263 ISISNQLLFIAYYQAHNHDVNVVRWHPKVDNILASGSDDNCIKIWK 308
Score = 164 (62.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ L H V +V W+P+ + S D I+++ KE + + ++ GH+ T+
Sbjct: 128 ASVLTDHSQDVKHVVWSPKENALVSASYDNTIKIY-KEVDDDWECSHTLI--GHESTVWS 184
Query: 103 TAWSPCGNFIASASFDATTAVWD-KRSGQFECN----ATLEGHENE-VKSVTWSKNGQFL 156
++ G S D +W +SG + T+ G+ N + V WSK +
Sbjct: 185 LSFHSSGELFVSCGDDKVLKIWKCLKSGPSDVKWISICTIAGYHNRPIYDVDWSKLNNKI 244
Query: 157 ATCSRDKSVWVWEVGE-----EDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTV 210
AT D ++ ++ + ++ A AH DV VR+HP DNILAS S D+ +
Sbjct: 245 ATACGDDAIRIFSIVRITISISNQLLFIAYYQAHNHDVNVVRWHPKVDNILASGSDDNCI 304
Query: 211 KLFK 214
K++K
Sbjct: 305 KIWK 308
Score = 157 (60.3 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 41/138 (29%), Positives = 66/138 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGN---KFTAKAILSDGHQRT 99
S TL GH+ VW++S++ G + SCG+DK +++W G K+ + ++ H R
Sbjct: 172 SHTLIGHESTVWSLSFHSSGELFVSCGDDKVLKIWKCLKSGPSDVKWISICTIAGYHNRP 231
Query: 100 IRETAWSPCGNFIASASFDATTAVWD------KRSGQFECNATLEGHENEVKSVTWS-KN 152
I + WS N IA+A D ++ S Q A + H ++V V W K
Sbjct: 232 IYDVDWSKLNNKIATACGDDAIRIFSIVRITISISNQLLFIAYYQAHNHDVNVVRWHPKV 291
Query: 153 GQFLATCSRDKSVWVWEV 170
LA+ S D + +W+V
Sbjct: 292 DNILASGSDDNCIKIWKV 309
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 144/288 (50%), Positives = 194/288 (67%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
+M L+GH+ RVWNV+WNP GT+++SCG DK+IRLWG E G + K++L DGHQR
Sbjct: 2 KMSKLSDLEGHEDRVWNVAWNPSGTILASCGGDKSIRLWGLE--GGSWVCKSVLLDGHQR 59
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
T+R +WS CG ++AS+SFD TT +W ++ FE ATLEGHENEVK+ WS +G+FLAT
Sbjct: 60 TVRGVSWSNCGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWSPSGRFLAT 119
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
CSRDK+VW+WEVGE++E+ECA+V H QDVKKV +HP + LASASYD+T++ F E+
Sbjct: 120 CSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRDELASASYDNTIRFFCEEVD 179
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 277
DW + TL H STVW L+F +LA+C+ D +V +W G D S
Sbjct: 180 --DWQCYCTLDKHASTVWGLSFGPGPEPQLASCAADGSVYVW-----GTKG-----DRRS 227
Query: 278 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 325
W+ TL H R +YD+SWC +ATACGD+A+R+F + + GD
Sbjct: 228 -WELCGTLE-RHPRPVYDVSWCRTRGFLATACGDNAVRVFVK--DGGD 271
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 80/279 (28%), Positives = 134/279 (48%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S L GHQ V VSW+ G ++S D +W ++ + F + A L +GH+ ++
Sbjct: 51 SVLLDGHQRTVRGVSWSNCGRYLASSSFDGTTCIWRRQD--DTFESCATL-EGHENEVKA 107
Query: 103 TAWSPCGNFIASASFDATTAVWDK-RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
WSP G F+A+ S D T +W+ +FEC + H +VK V W + LA+ S
Sbjct: 108 CGWSPSGRFLATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRDELASASY 167
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEA 220
D ++ + E D+++C ++ H V + F P + LAS + D +V ++
Sbjct: 168 DNTIRFF-CEEVDDWQCYCTLDKHASTVWGLSFGPGPEPQLASCAADGSVYVWGTKGDRR 226
Query: 221 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280
W TL+ H V+ +++ R LAT D V+++ K G D W+
Sbjct: 227 SWELCGTLERHPRPVYDVSWCRTRGFLATACGDNAVRVF--VKDGG---------DCSWR 275
Query: 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDA-IRIFK 318
CTL+ H + + +SW L+A+A GDD +R+++
Sbjct: 276 LGCTLTQAHSQDVNSVSWSPSGGLLASA-GDDGYVRLWQ 313
Score = 214 (80.4 bits), Expect = 9.6e-16, P = 9.6e-16
Identities = 45/94 (47%), Positives = 61/94 (64%)
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338
W+ TL H R +YD+SWC +ATACGD+A+R+F + + GD S+ L T
Sbjct: 228 WELCGTLE-RHPRPVYDVSWCRTRGFLATACGDNAVRVFVK--DGGDC---SWRLGCTLT 281
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
+AH+QDVN V+W+P G+LAS DDG V+LWQI
Sbjct: 282 QAHSQDVNSVSWSPS-GGLLASAGDDGYVRLWQI 314
Score = 163 (62.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 54/175 (30%), Positives = 82/175 (46%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC 108
H V V W+P ++S D IR + +E + + L D H T+ ++ P
Sbjct: 146 HSQDVKKVLWHPDRDELASASYDNTIRFFCEEV--DDWQCYCTL-DKHASTVWGLSFGPG 202
Query: 109 GN-FIASASFDATTAVW----DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+AS + D + VW D+RS + C TLE H V V+W + FLAT D
Sbjct: 203 PEPQLASCAADGSVYVWGTKGDRRSWEL-CG-TLERHPRPVYDVSWCRTRGFLATACGDN 260
Query: 164 SVWVW-EVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+V V+ + G + + + AH QDV V + P +LASA D V+L++ D
Sbjct: 261 AVRVFVKDGGDCSWRLGCTLTQAHSQDVNSVSWSPSGGLLASAGDDGYVRLWQID 315
Score = 158 (60.7 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 37/130 (28%), Positives = 62/130 (47%)
Query: 45 TLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
TL H VW +S+ P ++SC D ++ +WG + + L + H R + +
Sbjct: 186 TLDKHASTVWGLSFGPGPEPQLASCAADGSVYVWGTKGDRRSWELCGTL-ERHPRPVYDV 244
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQ--FECNATL-EGHENEVKSVTWSKNGQFLATCS 160
+W F+A+A D V+ K G + TL + H +V SV+WS +G LA+
Sbjct: 245 SWCRTRGFLATACGDNAVRVFVKDGGDCSWRLGCTLTQAHSQDVNSVSWSPSGGLLASAG 304
Query: 161 RDKSVWVWEV 170
D V +W++
Sbjct: 305 DDGYVRLWQI 314
Score = 132 (51.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 37/145 (25%), Positives = 65/145 (44%)
Query: 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG 287
L+ H VW++A++ G+ LA+C D ++++W G G W C L
Sbjct: 9 LEGHEDRVWNVAWNPSGTILASCGGDKSIRLW-----GLEGGS--------WVCKSVLLD 55
Query: 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 347
H RT+ +SW + +A++ D I++ + +F+ T H +V
Sbjct: 56 GHQRTVRGVSWSNCGRYLASSSFDGTTCIWRRQDD-------TFESCATLE-GHENEVKA 107
Query: 348 VAWNPVVPGMLASCSDDGDVKLWQI 372
W+P LA+CS D V +W++
Sbjct: 108 CGWSPS-GRFLATCSRDKTVWIWEV 131
>UNIPROTKB|H9L0T1 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016226 "iron-sulfur cluster assembly" evidence=IEA]
[GO:0071817 "MMXD complex" evidence=IEA] [GO:0097361 "CIA complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104486 OMA:EEEYECV EMBL:AADN02064069
ProteinModelPortal:H9L0T1 Ensembl:ENSGALT00000028398 Uniprot:H9L0T1
Length = 225
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 132/219 (60%), Positives = 163/219 (74%)
Query: 156 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 215
LATCSRDKSVWVW+V +E+EYEC +V+N+H QDVK V +HP +LASASYDDTVKL+ E
Sbjct: 3 LATCSRDKSVWVWDVDDEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDTVKLYHE 62
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275
+ E DW+ ATL+ H STVWS+AFD G RLA+CSDD TV+IW+ Y+PGN G+
Sbjct: 63 E--EDDWVCCATLEGHESTVWSVAFDGSGERLASCSDDKTVRIWQCYRPGNEEGVACSGT 120
Query: 276 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG---DSDMVSFD 332
D WKCVC LSG+H RTIYD+SWC LT +ATACGDDAIR+F+E+ + +F
Sbjct: 121 DPTWKCVCNLSGYHTRTIYDVSWCRLTGALATACGDDAIRVFEESTSSSPQQQQQQPTFS 180
Query: 333 LVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371
L RAH+QDVNCVAWNP PG+LASCSDDG++ W+
Sbjct: 181 LTAHVPRAHSQDVNCVAWNPKEPGLLASCSDDGEIAFWK 219
Score = 212 (79.7 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 48/171 (28%), Positives = 91/171 (53%)
Query: 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122
+++++C DK++ +W + ++ ++L+ H + ++ W P +ASAS+D T
Sbjct: 1 SLLATCSRDKSVWVWDVDD-EEEYECVSVLNS-HTQDVKHVVWHPNQELLASASYDDTVK 58
Query: 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV---GEEDEYECA 179
++ + + C ATLEGHE+ V SV + +G+ LA+CS DK+V +W+ G E+ C+
Sbjct: 59 LYHEEEDDWVCCATLEGHESTVWSVAFDGSGERLASCSDDKTVRIWQCYRPGNEEGVACS 118
Query: 180 A-------VINA---HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 220
V N H + + V + LA+A DD +++F+E + +
Sbjct: 119 GTDPTWKCVCNLSGYHTRTIYDVSWCRLTGALATACGDDAIRVFEESTSSS 169
Score = 123 (48.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW-----GKES----FGNKFTAKAI--LS 93
TL+GH+ VW+V+++ G ++SC +DK +R+W G E G T K + LS
Sbjct: 72 TLEGHESTVWSVAFDGSGERLASCSDDKTVRIWQCYRPGNEEGVACSGTDPTWKCVCNLS 131
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDK 126
H RTI + +W +A+A D V+++
Sbjct: 132 GYHTRTIYDVSWCRLTGALATACGDDAIRVFEE 164
Score = 120 (47.3 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 39/138 (28%), Positives = 63/138 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L H V +V W+P +++S D ++L+ +E + + A L +GH+ T+ A+
Sbjct: 29 LNSHTQDVKHVVWHPNQELLASASYDDTVKLYHEEE--DDWVCCATL-EGHESTVWSVAF 85
Query: 106 SPCGNFIASASFDATTAVWD-KRSGQFE---CNAT---------LEG-HENEVKSVTWSK 151
G +AS S D T +W R G E C+ T L G H + V+W +
Sbjct: 86 DGSGERLASCSDDKTVRIWQCYRPGNEEGVACSGTDPTWKCVCNLSGYHTRTIYDVSWCR 145
Query: 152 NGQFLATCSRDKSVWVWE 169
LAT D ++ V+E
Sbjct: 146 LTGALATACGDDAIRVFE 163
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 132/337 (39%), Positives = 210/337 (62%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
++I+S + +VWN++W+P G ++++C DK I++W K++ G +++ +GH++
Sbjct: 13 KLIDSMQKEAPYDKVWNLAWHPNGEILATCANDKYIQIWSKDTNGKWGLVQSL--EGHEK 70
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN--ATLEGHENEVKSVTWSKNGQFL 156
T+R AWSPCG F+A ASFDA+T++W+K + E ++LEGH EVKSV W G L
Sbjct: 71 TVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLL 130
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
ATCSRDKS+W+W++ +++++EC ++ + H QD+K V +HP + +LAS+SYDDT+K +K+
Sbjct: 131 ATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIKFWKD- 189
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276
+ DW TL H S++W LAF++ G +L +C +D V WK K +N+
Sbjct: 190 -IDGDWECINTLTGHESSIWDLAFNKDGDKLVSCGEDKLVLFWKFDK----------ENE 238
Query: 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT 336
W + + R IY I W LT+ I T DD+I IF E E+ D+ + ++
Sbjct: 239 K-WINIFKFKNENSRPIYSIDWSSLTNTIVTGSADDSI-IFYEQ-ESDDTPD-KYKIILK 294
Query: 337 EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
+ AH+ DVNC WNP +LASC DDG +K+W+++
Sbjct: 295 KKNAHDSDVNCTKWNPKFKNILASCGDDGFIKIWELQ 331
Score = 154 (59.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 37/141 (26%), Positives = 65/141 (46%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
E IN TL GH+ +W++++N G + SCGEDK + W + K+ + + R
Sbjct: 195 ECIN--TLTGHESSIWDLAFNKDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSR 252
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL-----EGHENEVKSVTWS-KN 152
I WS N I + S D + +++ S + H+++V W+ K
Sbjct: 253 PIYSIDWSSLTNTIVTGSADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKF 312
Query: 153 GQFLATCSRDKSVWVWEVGEE 173
LA+C D + +WE+ ++
Sbjct: 313 KNILASCGDDGFIKIWELQDK 333
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 46/179 (25%), Positives = 80/179 (44%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQ 97
C INS GH + V W+P +++S D I+ W K+ G+ + GH+
Sbjct: 152 CLSINS----GHGQDIKCVLWHPNEELLASSSYDDTIKFW-KDIDGDWECINTLT--GHE 204
Query: 98 RTIRETAWSPCGNFIASASFDATTAVW--DKRSGQFECNATLEGHENE--VKSVTWSKNG 153
+I + A++ G+ + S D W DK + ++ N +EN + S+ WS
Sbjct: 205 SSIWDLAFNKDGDKLVSCGEDKLVLFWKFDKENEKW-INIFKFKNENSRPIYSIDWSSLT 263
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVI----NAHIQDVKKVRFHPFDNILASASYDD 208
+ T S D S+ +E +D + +I NAH DV +++P + ++ DD
Sbjct: 264 NTIVTGSADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDD 322
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 551 (199.0 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 111/267 (41%), Positives = 163/267 (61%)
Query: 116 SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG--EE 173
SFD T VW+ + E + L GHE+EVKSV+W+ +G LATC RDKSVW+WE+ E+
Sbjct: 67 SFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEED 126
Query: 174 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--- 230
DE++ AV+ H +DVK V +HP ++L S SYD+T+K++ + + D+ TL
Sbjct: 127 DEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNN 186
Query: 231 -HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289
H+STVWS++F+ G ++ TCSDD VKIWK + + + + + W VCTLSG H
Sbjct: 187 GHSSTVWSISFNAAGDKMVTCSDDLAVKIWKT----DISRMQSGEGYVPWTHVCTLSGFH 242
Query: 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA 349
RTIY + W +IA+ GDD I++F ++ ++ D S+ L+ + +AH DVN V
Sbjct: 243 DRTIYSVHWSR-DGVIASGAGDDTIQLFVDS-DSDSVDGPSYKLLVKKEKAHEMDVNSVQ 300
Query: 350 WNPVVPG-MLASCSDDGDVKLWQIKLE 375
W P +LAS SDD VK+W++ E
Sbjct: 301 WAPDKESRLLASASDDKMVKIWKLASE 327
Score = 234 (87.4 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 53/191 (27%), Positives = 100/191 (52%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG-KESFGNKFTAKAILSDGHQRTIRETA 104
L+GH+ V +VSWN G+++++CG DK++ +W + ++F A+L+ GH ++
Sbjct: 88 LRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLT-GHSEDVKMVL 146
Query: 105 WSPCGNFIASASFDATTAVW--DKRSGQFECNATLE----GHENEVKSVTWSKNGQFLAT 158
W P + + S S+D T +W + G + C TL GH + V S++++ G + T
Sbjct: 147 WHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVT 206
Query: 159 CSRDKSVWVWEVG----EEDE-Y----ECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209
CS D +V +W+ + E Y + H + + V + D ++AS + DDT
Sbjct: 207 CSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRTIYSVHWSR-DGVIASGAGDDT 265
Query: 210 VKLFKEDKAEA 220
++LF + +++
Sbjct: 266 IQLFVDSDSDS 276
Score = 168 (64.2 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 51/160 (31%), Positives = 78/160 (48%)
Query: 228 LKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKEY--------KPGNSAGIPTPDNDSV 278
L+ HT VW++A++ +A+CS D TV+IW++ K G+ G N V
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLG-SFDGNTCV 74
Query: 279 WK-------CVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFKENPEAGDSDMVS 330
W+ V L GH + +SW L+AT CG D ++ I++ PE D
Sbjct: 75 WENFATDSESVSVLRGHESE-VKSVSWNASGSLLAT-CGRDKSVWIWEIQPEEDDE---- 128
Query: 331 FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
FD + H++DV V W+P + +L SCS D +K+W
Sbjct: 129 FDTIAVL-TGHSEDVKMVLWHPTMD-VLFSCSYDNTIKIW 166
Score = 155 (59.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 46/152 (30%), Positives = 70/152 (46%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW----GKESFGNKF---TAKA 90
C S+ GH VW++S+N G + +C +D +++W + G + T
Sbjct: 177 CVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVC 236
Query: 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVW-----DKRSG-QFECNATLE-GHENE 143
LS H RTI WS G IAS + D T ++ D G ++ E HE +
Sbjct: 237 TLSGFHDRTIYSVHWSRDG-VIASGAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAHEMD 295
Query: 144 VKSVTWS--KNGQFLATCSRDKSVWVWEVGEE 173
V SV W+ K + LA+ S DK V +W++ E
Sbjct: 296 VNSVQWAPDKESRLLASASDDKMVKIWKLASE 327
Score = 127 (49.8 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 44 QTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAK 89
Q L+GH RVWNV+WNP +I+SC DK +R+W + S +T K
Sbjct: 14 QKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCK 60
Score = 69 (29.3 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 94 DGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRS 128
+GH + AW+P + IAS S D T +W++ S
Sbjct: 17 EGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSS 52
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 141/359 (39%), Positives = 203/359 (56%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGK---ESFGNKFTAKAILSDGHQRTI 100
Q LK R+W++SWN +G+++ S GED+ I+LW K + +G+ F+ L + H+++I
Sbjct: 8 QKLKASNKRLWSLSWNHKGSVLISSGEDRVIKLWAKCNDQLWGSSFS----LPEAHKKSI 63
Query: 101 RETAWSPCGNFIASASFDATTAVW---DKRSG-QFECNATLEGHENEVKSVTWSKNGQFL 156
R WSPCG +IASASFD T +W + S + E +LEGH +EVK V W +G +
Sbjct: 64 RCVTWSPCGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGHLI 123
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
ATC RDKSVW+WE +E++ +C +V+ H QDVK V +HP +L S SYD+ + +++E+
Sbjct: 124 ATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPHGEVLVSTSYDNKINVYREE 183
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK-EYKPGNSAGIPTPDN 275
DW FA L H STVW F G LA+CSDD VK+W E G S
Sbjct: 184 LD--DWTVFAQLSGHDSTVWKAEFSPSGDILASCSDDLCVKLWSWEGVCGKS-------- 233
Query: 276 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK--EN--PEAGDSDMVSF 331
S W C+ TLSG+H RTI+D++W + L+A+ D+ + I+K N G
Sbjct: 234 -SSWMCIATLSGYHTRTIFDLNWSPDSQLLASCGSDNRLCIYKMPANGLTHIGGKPCFEE 292
Query: 332 DLVHTEH--RAHNQDVNCVAWNPV-VPGM-----LASC-------SDDGDVKLWQIKLE 375
V H AH++DVNCV W P + + +++C SDDG +K W I+ E
Sbjct: 293 PPVLWGHVPNAHSEDVNCVRWKPGNITDISHSESISNCHLFLTTASDDGYIKFWSIEYE 351
Score = 234 (87.4 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 53/182 (29%), Positives = 92/182 (50%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI-LSDGHQ 97
EM +L+GH V V+W P G +I++CG DK++ LW F ++ + + + H
Sbjct: 97 EMEALVSLEGHTSEVKCVAWCPSGHLIATCGRDKSVWLW---EFDDEEDVQCVSVLQPHS 153
Query: 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 157
+ ++ AW P G + S S+D V+ + + A L GH++ V +S +G LA
Sbjct: 154 QDVKSVAWHPHGEVLVSTSYDNKINVYREELDDWTVFAQLSGHDSTVWKAEFSPSGDILA 213
Query: 158 TCSRDKSV--WVWE--VGEEDEYECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKL 212
+CS D V W WE G+ + C A ++ H + + + + P +LAS D+ + +
Sbjct: 214 SCSDDLCVKLWSWEGVCGKSSSWMCIATLSGYHTRTIFDLNWSPDSQLLASCGSDNRLCI 273
Query: 213 FK 214
+K
Sbjct: 274 YK 275
>WB|WBGene00012479 [details] [associations]
symbol:Y18D10A.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000003 GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:AL034393 PIR:T26531
RefSeq:NP_493247.2 ProteinModelPortal:Q9XW12 SMR:Q9XW12
IntAct:Q9XW12 STRING:Q9XW12 PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9
GeneID:173152 KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 125/336 (37%), Positives = 194/336 (57%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLW---GKESFGNKFTAKAILSDGHQRTIRET 103
K RVW W+ G +++SCG+DK +R+W G+ + + L D H R +R
Sbjct: 14 KDDTSRVWMTCWHHGGRILASCGDDKAVRVWSLVGEPDSKMRLECRTTLDDSHTRAVRSV 73
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQF-ECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
A+S G + SASFDA+ V+ + G+F E N LEGHE+EVK +SK+ +FLATCSRD
Sbjct: 74 AFSNDGKCLVSASFDASVVVYQQEDGEFAEVNK-LEGHESEVKCAVFSKSDEFLATCSRD 132
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
KSVW W+ E++++ ++++ H QDVK+V +HP +++L S SYD +++ ++ D E DW
Sbjct: 133 KSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTEDLLVSCSYDSSIRFYRFD-GE-DW 190
Query: 223 INFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281
+ + H TVWS+AFD G RL T +D ++++ G+ + D D+ WK
Sbjct: 191 VTQQKIDGCHVGTVWSIAFDTEGHRLVTVGEDHCIQLFVRENIGSKSA----DQDT-WKS 245
Query: 282 VCTLSGHHGR-TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 340
V + R +Y ++W D+IAT GD IR+FK + +S ++ + R
Sbjct: 246 VARYDVENTRWPLYSVAWNSTNDVIATGGGDCKIRLFKIS-STPESPVIEH--LGVVGR- 301
Query: 341 HNQDVNCVAWNP--VVPGMLASCSDDGDVKLWQIKL 374
H DVN VAWNP +L S SDDG ++LW++++
Sbjct: 302 HELDVNHVAWNPNPKFSNLLTSASDDGTIRLWELEI 337
Score = 163 (62.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 47/237 (19%), Positives = 108/237 (45%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
E L+GH+ V ++ +++C DK++ W ++ F+ +IL H +
Sbjct: 100 EFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDE-DEDFSVSSILQP-HTQ 157
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG-HENEVKSVTWSKNGQFLA 157
+++ AW P + + S S+D++ + + ++G H V S+ + G L
Sbjct: 158 DVKQVAWHPTEDLLVSCSYDSSIRFYRFDGEDWVTQQKIDGCHVGTVWSIAFDTEGHRLV 217
Query: 158 TCSRDKSVWVW---EVGEE--DEYECAAVINAHIQDVK----KVRFHPFDNILASASYDD 208
T D + ++ +G + D+ +V +++ + V ++ ++++A+ D
Sbjct: 218 TVGEDHCIQLFVRENIGSKSADQDTWKSVARYDVENTRWPLYSVAWNSTNDVIATGGGDC 277
Query: 209 TVKLFK-EDKAEADWI-NFATLKSHTSTVWSLAFD---RIGSRLATCSDDATVKIWK 260
++LFK E+ I + + H V +A++ + + L + SDD T+++W+
Sbjct: 278 KIRLFKISSTPESPVIEHLGVVGRHELDVNHVAWNPNPKFSNLLTSASDDGTIRLWE 334
>UNIPROTKB|Q9XW12 [details] [associations]
symbol:Y18D10A.9 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1 homolog" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0016226
HOGENOM:HOG000208901 OMA:SWKCVCT GeneTree:ENSGT00700000104486
EMBL:AL034393 PIR:T26531 RefSeq:NP_493247.2
ProteinModelPortal:Q9XW12 SMR:Q9XW12 IntAct:Q9XW12 STRING:Q9XW12
PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9 GeneID:173152
KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 125/336 (37%), Positives = 194/336 (57%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLW---GKESFGNKFTAKAILSDGHQRTIRET 103
K RVW W+ G +++SCG+DK +R+W G+ + + L D H R +R
Sbjct: 14 KDDTSRVWMTCWHHGGRILASCGDDKAVRVWSLVGEPDSKMRLECRTTLDDSHTRAVRSV 73
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQF-ECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
A+S G + SASFDA+ V+ + G+F E N LEGHE+EVK +SK+ +FLATCSRD
Sbjct: 74 AFSNDGKCLVSASFDASVVVYQQEDGEFAEVNK-LEGHESEVKCAVFSKSDEFLATCSRD 132
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
KSVW W+ E++++ ++++ H QDVK+V +HP +++L S SYD +++ ++ D E DW
Sbjct: 133 KSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTEDLLVSCSYDSSIRFYRFD-GE-DW 190
Query: 223 INFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281
+ + H TVWS+AFD G RL T +D ++++ G+ + D D+ WK
Sbjct: 191 VTQQKIDGCHVGTVWSIAFDTEGHRLVTVGEDHCIQLFVRENIGSKSA----DQDT-WKS 245
Query: 282 VCTLSGHHGR-TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 340
V + R +Y ++W D+IAT GD IR+FK + +S ++ + R
Sbjct: 246 VARYDVENTRWPLYSVAWNSTNDVIATGGGDCKIRLFKIS-STPESPVIEH--LGVVGR- 301
Query: 341 HNQDVNCVAWNP--VVPGMLASCSDDGDVKLWQIKL 374
H DVN VAWNP +L S SDDG ++LW++++
Sbjct: 302 HELDVNHVAWNPNPKFSNLLTSASDDGTIRLWELEI 337
Score = 163 (62.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 47/237 (19%), Positives = 108/237 (45%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
E L+GH+ V ++ +++C DK++ W ++ F+ +IL H +
Sbjct: 100 EFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDE-DEDFSVSSILQP-HTQ 157
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG-HENEVKSVTWSKNGQFLA 157
+++ AW P + + S S+D++ + + ++G H V S+ + G L
Sbjct: 158 DVKQVAWHPTEDLLVSCSYDSSIRFYRFDGEDWVTQQKIDGCHVGTVWSIAFDTEGHRLV 217
Query: 158 TCSRDKSVWVW---EVGEE--DEYECAAVINAHIQDVK----KVRFHPFDNILASASYDD 208
T D + ++ +G + D+ +V +++ + V ++ ++++A+ D
Sbjct: 218 TVGEDHCIQLFVRENIGSKSADQDTWKSVARYDVENTRWPLYSVAWNSTNDVIATGGGDC 277
Query: 209 TVKLFK-EDKAEADWI-NFATLKSHTSTVWSLAFD---RIGSRLATCSDDATVKIWK 260
++LFK E+ I + + H V +A++ + + L + SDD T+++W+
Sbjct: 278 KIRLFKISSTPESPVIEHLGVVGRHELDVNHVAWNPNPKFSNLLTSASDDGTIRLWE 334
>POMBASE|SPAC806.02c [details] [associations]
symbol:SPAC806.02c "Par A family ATPase/WD repeat iron
cluster assembly fusion protein (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0043234 "protein complex" evidence=NAS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000808 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS01215 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC806.02c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
eggNOG:COG2319 GO:GO:0016887 GO:GO:0051539 GO:GO:0016226
InterPro:IPR019591 Pfam:PF10609 PIR:T39094 RefSeq:NP_592852.1
ProteinModelPortal:Q9UT57 EnsemblFungi:SPAC806.02c.1 GeneID:2542122
KEGG:spo:SPAC806.02c OrthoDB:EOG4XKZGD NextBio:20803194
Uniprot:Q9UT57
Length = 608
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 118/337 (35%), Positives = 186/337 (55%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T+ GH GR+W+V+ +P + ++ +DK++R++ N + ++ H R+IR A
Sbjct: 285 TISGHTGRLWSVAAHPMLPLFATSSQDKSVRIYNS----NTYNLVHVIDGFHTRSIRRVA 340
Query: 105 WSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
W P +A ASFD+ ++ +K +EC A LEGHENEVK + WS NG +LATCSRDK
Sbjct: 341 WRPIERPVLAVASFDSVVSINEKIDDDWECTAALEGHENEVKCIAWSCNGNYLATCSRDK 400
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVW+WE E+DE++C AV+ H QDVK V +HP +++L S SYD+++ +++D DW
Sbjct: 401 SVWIWEATEDDEFDCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWRDDGD--DWA 458
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG------NSAGIPTPDNDS 277
L+ HT+TVW+LAF G+ LA+ +D V +W + +S I P
Sbjct: 459 LTCQLQGHTNTVWALAFSPNGNTLASADNDGNVFLWIKISSNEDVATIDSTNILRPALQE 518
Query: 278 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337
WK +L H +Y ISW + L +A GD I +++ D + + + +
Sbjct: 519 EWKQQTSLPHIHKGAVYTISWMNDATL-CSAGGDGKIVVYQREKH----DEALWHVAYEQ 573
Query: 338 HRAHN-QDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH ++N + + + L S DDG+ ++W K
Sbjct: 574 DHAHGVYEINSLEY--LRDDRLLSGGDDGECRVWSFK 608
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 124/340 (36%), Positives = 193/340 (56%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD-GHQRTIRE 102
++LK ++ ++W+ ++ QG ++++ D+ I+L + + FT +L + H++ IR
Sbjct: 8 KSLKLYKEKIWSFDFS-QG-ILATGSTDRKIKLVSVKY--DDFTLIDVLDETAHKKAIRS 63
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQ---FECN--ATLEGHENEVKSVTWSKNGQFLA 157
AW P + +A+ SFD+T ++W K FE + A +EGHENEVK V WS +G +LA
Sbjct: 64 VAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLA 123
Query: 158 TCSRDKSVWVWEVGEE-DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
TCSRDKSVW+WE E +EYEC +V+ H QDVK V +HP + +LAS+SYDDTV+++K+
Sbjct: 124 TCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKD- 182
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGS--RLATCSDDATVKIWKEYKPGNSAGIPTPD 274
+ DW A L H TVWS FD+ RL + SDD+TV++WK Y G+ D
Sbjct: 183 -YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWK-YM-GDDE-----D 234
Query: 275 NDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 334
+ W C L H R +Y+++W LIA+ D + +++E D + F
Sbjct: 235 DQQEWVCEAILPDVHKRQVYNVAW-GFNGLIASVGADGVLAVYEEV----DGEWKVFAKR 289
Query: 335 HTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIK 373
H + ++N V W + +LA+ DDG V W ++
Sbjct: 290 ALCHGVY--EINVVKWLELNGKTILATGGDDGIVNFWSLE 327
>CGD|CAL0000383 [details] [associations]
symbol:orf19.4293 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IEA] [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000383 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000021 EMBL:AACQ01000022 RefSeq:XP_720601.1
RefSeq:XP_720729.1 ProteinModelPortal:Q5AG86 STRING:Q5AG86
GeneID:3637653 GeneID:3637738 KEGG:cal:CaO19.11769
KEGG:cal:CaO19.4293 Uniprot:Q5AG86
Length = 383
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 106/266 (39%), Positives = 149/266 (56%)
Query: 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE--DEYECAAVINAH 185
+ ++ A +EGHENEVK+V W+ GQ+LA+CSRDKSVW+WE E +E+EC AV+N H
Sbjct: 124 NNEWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLNDH 183
Query: 186 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 245
QDVK V +HP NILAS+SYDDT++++++D A +W L H TVW F+ + S
Sbjct: 184 SQDVKNVSWHPSMNILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVWCSKFESLKS 243
Query: 246 --------RLATCSDDATVKIW---KEYKPGNSAGIPTPD-----NDSVWKCVCTLSGHH 289
RL + SDD +V+IW +E + A + P N+ VW+ L H
Sbjct: 244 PIADSSVLRLVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRHTNEMVWEVESVLPSVH 303
Query: 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT-EHRAHNQDVNCV 348
+Y ++W LT IA+A D I ++ E E G V D +H H H ++NCV
Sbjct: 304 KYPVYSVAWSALTGKIASAGSDGKIVVYSET-EKGK--WV-IDSIHEGAHGVH--EINCV 357
Query: 349 AWNPVVPG--MLASCSDDGDVKLWQI 372
W + +L S DDG V LW+I
Sbjct: 358 IWAQLDDENEILVSAGDDGYVNLWKI 383
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 86/346 (24%), Positives = 149/346 (43%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
++K H +VW+VS +P +I++ DK+ +L+ K S KF A L D H+R+IR A
Sbjct: 7 SIKAHNDKVWSVSVHPTLPIIATASTDKSTKLY-KLSARQKFPLVAKLEDTHKRSIRSVA 65
Query: 105 WSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+ P G + F A+ +G F+ ++ G + V + + +A
Sbjct: 66 FKPPLGGADTPKSDFLDLPAL---AAGSFDSTISVWGIDEP--DVEYDIE-EVIAN---Q 116
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
K + +E+ A+I H +VK V ++ LAS S D +V +++ D +
Sbjct: 117 KEILT---SPNNEWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEE 173
Query: 223 IN-FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS---AGIPTPDNDSV 278
A L H+ V ++++ + LA+ S D T++I+++ G+ GI +V
Sbjct: 174 FECVAVLNDHSQDVKNVSWHPSMNILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTV 233
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV---- 334
W C+ I D S L +A D ++RI+ E D + +L
Sbjct: 234 W---CSKFESLKSPIADSSVLRLV----SASDDLSVRIWVAKREQEDEEQAKLELPSSIR 286
Query: 335 HTEHRA----------HNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
HT H V VAW+ + G +AS DG + ++
Sbjct: 287 HTNEMVWEVESVLPSVHKYPVYSVAWSALT-GKIASAGSDGKIVVY 331
Score = 182 (69.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 56/224 (25%), Positives = 103/224 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG-NKFTAKAILSDGHQRTIRETA 104
++GH+ V V WN QG ++SC DK++ +W + +F A+L+D H + ++ +
Sbjct: 133 IEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLND-HSQDVKNVS 191
Query: 105 WSPCGNFIASASFDATTAVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W P N +AS+S+D T ++ D ++ C L GHE V W + L + D
Sbjct: 192 WHPSMNILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTV----WCSKFESLKSPIAD 247
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
SV + V D+ ++ I K+ + D A +++ E E +
Sbjct: 248 SSV-LRLVSASDD------LSVRIWVAKREQE---DEEQAKLELPSSIRHTNEMVWEVE- 296
Query: 223 INFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
+ L S H V+S+A+ + ++A+ D + ++ E + G
Sbjct: 297 ---SVLPSVHKYPVYSVAWSALTGKIASAGSDGKIVVYSETEKG 337
Score = 124 (48.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 42/162 (25%), Positives = 79/162 (48%)
Query: 221 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280
+W A ++ H + V ++ ++ G LA+CS D +V IW+ P+ ++
Sbjct: 126 EWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWET----------DPETLEEFE 175
Query: 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 340
CV L+ H + + ++SW +++A++ DD IRI++++ AGD + +++
Sbjct: 176 CVAVLNDH-SQDVKNVSWHPSMNILASSSYDDTIRIYQQDI-AGD-EWSCVGILN----G 228
Query: 341 HNQDVNCVAW----NPVVPGM---LASCSDDGDVKLWQIKLE 375
H V C + +P+ L S SDD V++W K E
Sbjct: 229 HEGTVWCSKFESLKSPIADSSVLRLVSASDDLSVRIWVAKRE 270
>UNIPROTKB|Q5AG86 [details] [associations]
symbol:CIA1 "Probable cytosolic iron-sulfur protein
assembly protein 1" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000383 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000021 EMBL:AACQ01000022 RefSeq:XP_720601.1
RefSeq:XP_720729.1 ProteinModelPortal:Q5AG86 STRING:Q5AG86
GeneID:3637653 GeneID:3637738 KEGG:cal:CaO19.11769
KEGG:cal:CaO19.4293 Uniprot:Q5AG86
Length = 383
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 106/266 (39%), Positives = 149/266 (56%)
Query: 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE--DEYECAAVINAH 185
+ ++ A +EGHENEVK+V W+ GQ+LA+CSRDKSVW+WE E +E+EC AV+N H
Sbjct: 124 NNEWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLNDH 183
Query: 186 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 245
QDVK V +HP NILAS+SYDDT++++++D A +W L H TVW F+ + S
Sbjct: 184 SQDVKNVSWHPSMNILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVWCSKFESLKS 243
Query: 246 --------RLATCSDDATVKIW---KEYKPGNSAGIPTPD-----NDSVWKCVCTLSGHH 289
RL + SDD +V+IW +E + A + P N+ VW+ L H
Sbjct: 244 PIADSSVLRLVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRHTNEMVWEVESVLPSVH 303
Query: 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT-EHRAHNQDVNCV 348
+Y ++W LT IA+A D I ++ E E G V D +H H H ++NCV
Sbjct: 304 KYPVYSVAWSALTGKIASAGSDGKIVVYSET-EKGK--WV-IDSIHEGAHGVH--EINCV 357
Query: 349 AWNPVVPG--MLASCSDDGDVKLWQI 372
W + +L S DDG V LW+I
Sbjct: 358 IWAQLDDENEILVSAGDDGYVNLWKI 383
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 86/346 (24%), Positives = 149/346 (43%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
++K H +VW+VS +P +I++ DK+ +L+ K S KF A L D H+R+IR A
Sbjct: 7 SIKAHNDKVWSVSVHPTLPIIATASTDKSTKLY-KLSARQKFPLVAKLEDTHKRSIRSVA 65
Query: 105 WSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+ P G + F A+ +G F+ ++ G + V + + +A
Sbjct: 66 FKPPLGGADTPKSDFLDLPAL---AAGSFDSTISVWGIDEP--DVEYDIE-EVIAN---Q 116
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
K + +E+ A+I H +VK V ++ LAS S D +V +++ D +
Sbjct: 117 KEILT---SPNNEWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEE 173
Query: 223 IN-FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS---AGIPTPDNDSV 278
A L H+ V ++++ + LA+ S D T++I+++ G+ GI +V
Sbjct: 174 FECVAVLNDHSQDVKNVSWHPSMNILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTV 233
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV---- 334
W C+ I D S L +A D ++RI+ E D + +L
Sbjct: 234 W---CSKFESLKSPIADSSVLRLV----SASDDLSVRIWVAKREQEDEEQAKLELPSSIR 286
Query: 335 HTEHRA----------HNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
HT H V VAW+ + G +AS DG + ++
Sbjct: 287 HTNEMVWEVESVLPSVHKYPVYSVAWSALT-GKIASAGSDGKIVVY 331
Score = 182 (69.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 56/224 (25%), Positives = 103/224 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG-NKFTAKAILSDGHQRTIRETA 104
++GH+ V V WN QG ++SC DK++ +W + +F A+L+D H + ++ +
Sbjct: 133 IEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLND-HSQDVKNVS 191
Query: 105 WSPCGNFIASASFDATTAVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W P N +AS+S+D T ++ D ++ C L GHE V W + L + D
Sbjct: 192 WHPSMNILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTV----WCSKFESLKSPIAD 247
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
SV + V D+ ++ I K+ + D A +++ E E +
Sbjct: 248 SSV-LRLVSASDD------LSVRIWVAKREQE---DEEQAKLELPSSIRHTNEMVWEVE- 296
Query: 223 INFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
+ L S H V+S+A+ + ++A+ D + ++ E + G
Sbjct: 297 ---SVLPSVHKYPVYSVAWSALTGKIASAGSDGKIVVYSETEKG 337
Score = 124 (48.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 42/162 (25%), Positives = 79/162 (48%)
Query: 221 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280
+W A ++ H + V ++ ++ G LA+CS D +V IW+ P+ ++
Sbjct: 126 EWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWET----------DPETLEEFE 175
Query: 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 340
CV L+ H + + ++SW +++A++ DD IRI++++ AGD + +++
Sbjct: 176 CVAVLNDH-SQDVKNVSWHPSMNILASSSYDDTIRIYQQDI-AGD-EWSCVGILN----G 228
Query: 341 HNQDVNCVAW----NPVVPGM---LASCSDDGDVKLWQIKLE 375
H V C + +P+ L S SDD V++W K E
Sbjct: 229 HEGTVWCSKFESLKSPIADSSVLRLVSASDDLSVRIWVAKRE 270
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 319 (117.4 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 107/366 (29%), Positives = 177/366 (48%)
Query: 26 NLTG-TNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGN 84
NL+G + L + QTL+ H G V +V ++P G + S D +++W +
Sbjct: 725 NLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIW------D 778
Query: 85 KFTAKAILS-DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE 143
T + + + DGH T+ A+SP G +AS S+D T +WD +G E T EGH +
Sbjct: 779 PATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATG--ELLQTFEGHPHS 836
Query: 144 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203
+ SV ++ +G+ LA+ S D ++ +W++ E +++H Q V+ V F P +LAS
Sbjct: 837 IWSVAFAPDGKELASASDDSTIKIWDLATG---ELQQTLDSHSQSVRSVAFSPDGKLLAS 893
Query: 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
+S D T+K++ E +L+ + V S+AF G +LA+ S+ TVK+W
Sbjct: 894 SSLDSTIKVWNPATGELQ----QSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWN--- 946
Query: 264 PGNSAGIPTPD--NDSVWKCVCTLSGHH-GRTIYDIS---WCHLT-DLIATACGDDA-IR 315
P + T + + SV + G + D + W T +L T G D IR
Sbjct: 947 PATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIR 1006
Query: 316 IFKENPE-----AGDSD--MVSFDLVHTEHRA----HNQDVNCVAWNPVVPGMLASCSDD 364
+P+ +G D + +DL +E + H++ V+ VA++P LAS S D
Sbjct: 1007 AVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPD-DKQLASSSLD 1065
Query: 365 GDVKLW 370
+KLW
Sbjct: 1066 STIKLW 1071
Score = 302 (111.4 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 101/346 (29%), Positives = 164/346 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRE 102
QTL GH G V +++++P G +++S D I LW + T + + + +GH +I
Sbjct: 786 QTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLW------DSATGELLQTFEGHPHSIWS 839
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
A++P G +ASAS D+T +WD +G+ + TL+ H V+SV +S +G+ LA+ S D
Sbjct: 840 VAFAPDGKELASASDDSTIKIWDLATGELQ--QTLDSHSQSVRSVAFSPDGKLLASSSLD 897
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
++ VW E + VK V F P LAS S +TVKL+ E
Sbjct: 898 STIKVWNPATG---ELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGEL-- 952
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE--------YKPGNSAGIPTPD 274
TL+ H+ +V S+AF G +LA+ S D T+K+W +K G+ I
Sbjct: 953 --LQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFK-GHDLWIRAVA 1009
Query: 275 NDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-DAIRIFKENPEAGDSDMVS--- 330
K + + S + ++D++ L + A+ ++ + S + S
Sbjct: 1010 FSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIK 1069
Query: 331 -FDLVHTEHR----AHNQDVNCVAWNPVVPG-MLASCSDDGDVKLW 370
+D E + H+Q V V ++P G +LAS S DG +KLW
Sbjct: 1070 LWDSATGELQRTLEGHSQGVRSVTFSP--DGKLLASNSYDGTIKLW 1113
Score = 275 (101.9 bits), Expect = 6.3e-22, P = 6.3e-22
Identities = 73/218 (33%), Positives = 112/218 (51%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
QT KGH + V+++P G + S +D I+LW + + L D H R++
Sbjct: 996 QTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS----ELQQSLED-HSRSVHAV 1050
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A+SP +AS+S D+T +WD +G+ + TLEGH V+SVT+S +G+ LA+ S D
Sbjct: 1051 AFSPDDKQLASSSLDSTIKLWDSATGELQ--RTLEGHSQGVRSVTFSPDGKLLASNSYDG 1108
Query: 164 SVWVWE--VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 221
++ +W GE + + V V F P LAS YD T+KL+ D A +
Sbjct: 1109 TIKLWNPLTGELQQ-----TLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLW--DSATGE 1161
Query: 222 WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ TL+ H+ + S+ F G LA+ S D T K+W
Sbjct: 1162 LLQ--TLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLW 1197
Score = 262 (97.3 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 70/217 (32%), Positives = 114/217 (52%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRE 102
+TL+GH V +V+++P G +++S D I+LW N T + + G +
Sbjct: 1080 RTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLW------NPLTGELQQTLTGRSDWVDS 1133
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
A+SP G +AS +D+T +WD +G E TLEGH + ++SV +S +G+ LA+ S D
Sbjct: 1134 VAFSPDGKQLASGYYDSTIKLWDSATG--ELLQTLEGHSDRIQSVVFSPDGKLLASGSYD 1191
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
++ +W+ E + H + V+ V F P +LAS+SY +T+KL+ D +
Sbjct: 1192 QTAKLWDPATG---ELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLW--DPVTGEL 1246
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ TL + S+AF G+RLA+ D KIW
Sbjct: 1247 LQ--TLNDPDESAGSVAFSPDGNRLASV-DIFDTKIW 1280
Score = 252 (93.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 65/216 (30%), Positives = 108/216 (50%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q+L+ H V V+++P ++S D I+LW + + T +GH + +R
Sbjct: 1038 QSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTL-----EGHSQGVRSV 1092
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+SP G +AS S+D T +W+ +G+ + TL G + V SV +S +G+ LA+ D
Sbjct: 1093 TFSPDGKLLASNSYDGTIKLWNPLTGELQ--QTLTGRSDWVDSVAFSPDGKQLASGYYDS 1150
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
++ +W+ E + H ++ V F P +LAS SYD T KL+ D A + +
Sbjct: 1151 TIKLWDSATG---ELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLW--DPATGELL 1205
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ H+ V S+AF G LA+ S T+K+W
Sbjct: 1206 QI--FEGHSKWVESVAFSPDGKLLASSSYGETIKLW 1239
Score = 241 (89.9 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 91/349 (26%), Positives = 159/349 (45%)
Query: 58 WNPQGTMISSCGEDKNIRLWGK-ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS 116
++P+G++ + N+ W + ++A+ + H + +SP G + S S
Sbjct: 711 FSPEGSITRRIF-NYNLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGS 769
Query: 117 FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 176
+D T +WD +G E TL+GH V+S+ +S +G+ LA+ S D ++ +W+
Sbjct: 770 YDDTVKIWDPATG--ELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATG--- 824
Query: 177 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 236
E H + V F P LASAS D T+K++ D A + TL SH+ +V
Sbjct: 825 ELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIW--DLATGELQQ--TLDSHSQSVR 880
Query: 237 SLAFDRIGSRLATCSDDATVKIW-------KEYKPGNSAGIPT----PDNDSV------- 278
S+AF G LA+ S D+T+K+W ++ G S + + PD +
Sbjct: 881 SVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKN 940
Query: 279 ----W-----KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 329
W + + TL GH +++ +++ +A++ D I+++ N G+
Sbjct: 941 TVKLWNPATGELLQTLEGH-SQSVRSVAFSPDGKQLASSSSDTTIKLW--NSTTGE---- 993
Query: 330 SFDLVHTEHRAHNQDVNCVAWNPVVPGM-LASCSDDGDVKLWQIKLENL 377
L T + H+ + VA++P G L S SDD +KLW + L
Sbjct: 994 ---LQQT-FKGHDLWIRAVAFSP--DGKHLVSGSDDNTIKLWDLATSEL 1036
Score = 211 (79.3 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 61/195 (31%), Positives = 96/195 (49%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRE 102
QTL G V +V+++P G ++S D I+LW + T + + + +GH I+
Sbjct: 1122 QTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLW------DSATGELLQTLEGHSDRIQS 1175
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G +AS S+D T +WD +G E EGH V+SV +S +G+ LA+ S
Sbjct: 1176 VVFSPDGKLLASGSYDQTAKLWDPATG--ELLQIFEGHSKWVESVAFSPDGKLLASSSYG 1233
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+++ +W+ E +N + V F P N LAS DT K++ D A +
Sbjct: 1234 ETIKLWDPVTG---ELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT-KIW--DPATGEL 1287
Query: 223 INFATLKSHTSTVWS 237
+ LK H+ VWS
Sbjct: 1288 LQ--ALKGHSKWVWS 1300
Score = 41 (19.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 57 SWNPQGTMISSC 68
SWNP G + +C
Sbjct: 626 SWNPAGAVEKAC 637
>UNIPROTKB|A4R7U3 [details] [associations]
symbol:CIA1 "Probable cytosolic iron-sulfur protein
assembly protein 1" species:242507 "Magnaporthe oryzae 70-15"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM001234 OrthoDB:EOG4CVKH5 RefSeq:XP_003716845.1
ProteinModelPortal:A4R7U3 STRING:A4R7U3 GeneID:2676736
KEGG:mgr:MGG_03150 Uniprot:A4R7U3
Length = 446
Score = 276 (102.2 bits), Expect = 9.1e-27, Sum P(2) = 9.1e-27
Identities = 59/132 (44%), Positives = 84/132 (63%)
Query: 125 DK-RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE-VGE---EDEYECA 179
DK +E LEGHENE+KS +S +GQ+LATCSRDKS+W+WE VG +DE+E
Sbjct: 128 DKDNDDDWEFTLVLEGHENEIKSAAFSPSGQYLATCSRDKSIWIWEDVGANEGDDEWETV 187
Query: 180 AVINAHIQDVKKVRFHP----------FDNILASASYDDTVKLFKEDKAEADWINFATLK 229
AV+ H DVK V + P ++LASASYDDT+++++ED + +W A L+
Sbjct: 188 AVLTEHDGDVKCVAWCPDVPGRNISSYSPDVLASASYDDTIRIWRED-GDGEWACVAVLE 246
Query: 230 SHTSTVWSLAFD 241
H+STVW + ++
Sbjct: 247 GHSSTVWGVQWE 258
Score = 232 (86.7 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 79/291 (27%), Positives = 138/291 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW---GKESFGNKFTAKAILSDGHQRTIRE 102
L+GH+ + + +++P G +++C DK+I +W G +++ A+L++ H ++
Sbjct: 141 LEGHENEIKSAAFSPSGQYLATCSRDKSIWIWEDVGANEGDDEWETVAVLTE-HDGDVKC 199
Query: 103 TAWSP----------CGNFIASASFDATTAVW-DKRSGQFECNATLEGHENEVKSVTWSK 151
AW P + +ASAS+D T +W + G++ C A LEGH + V V W
Sbjct: 200 VAWCPDVPGRNISSYSPDVLASASYDDTIRIWREDGDGEWACVAVLEGHSSTVWGVQWEP 259
Query: 152 ---NGQF--LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 206
N +F L + S DK++ VW + E+D+ E + +Q PF + L
Sbjct: 260 KVDNTKFPRLISWSADKTIRVWTL-EQDDPEASLSQPGAVQS-------PFKSGLGGIP- 310
Query: 207 DDTVK-LFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
+T++ KE+ W A L S HT ++S ++ + G R+A+ D ++ +++E P
Sbjct: 311 -NTMRRTLKEE-----WRCSAVLPSVHTRDIYSASWSKNG-RVASTGSDGSILVYEECAP 363
Query: 265 GNSAGIPTP--DNDS---------VWKCVCTLSGHHGR-TIYDISWCHLTD 303
N + P + DS WK + +S HG I I+WC D
Sbjct: 364 SNPSTTPADLEEGDSNVIVKPGEAKWKVLGKVSDGHGPYEINHITWCSRYD 414
Score = 178 (67.7 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 68/264 (25%), Positives = 113/264 (42%)
Query: 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK---RSG--QFECNATLEGHENEVK 145
++ +GH+ I+ A+SP G ++A+ S D + +W+ G ++E A L H+ +VK
Sbjct: 139 LVLEGHENEIKSAAFSPSGQYLATCSRDKSIWIWEDVGANEGDDEWETVAVLTEHDGDVK 198
Query: 146 SVTW----------SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195
V W S + LA+ S D ++ +W + E+ C AV+ H V V++
Sbjct: 199 CVAWCPDVPGRNISSYSPDVLASASYDDTIRIWREDGDGEWACVAVLEGHSSTVWGVQWE 258
Query: 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255
P D+T K + W T++ VW+L D A+ S
Sbjct: 259 P--------KVDNT----KFPRL-ISWSADKTIR-----VWTLEQD---DPEASLSQPGA 297
Query: 256 VKIWKEYKPGNSAGIPTPDNDSV---WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD 312
V+ +K G GIP ++ W+C L H R IY SW +A+ D
Sbjct: 298 VQ--SPFKSG-LGGIPNTMRRTLKEEWRCSAVLPSVHTRDIYSASWSK-NGRVASTGSDG 353
Query: 313 AIRIFKE----NPEAGDSDMVSFD 332
+I +++E NP +D+ D
Sbjct: 354 SILVYEECAPSNPSTTPADLEEGD 377
Score = 128 (50.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 69/240 (28%), Positives = 102/240 (42%)
Query: 104 AWS----PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN---GQF- 155
AWS P IA+A + T V+ + N T GH V+ W N G+
Sbjct: 26 AWSSIPHPTLPLIATAHEKSVT-VFSLSTLSAHSNLT-GGHTRSVRCAVWKPNLPSGKLC 83
Query: 156 LATCSRDKS--VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
L T S D + +W WE G+ E KK D + + +D+ K
Sbjct: 84 LVTASFDSTAGLWRWE-GDVPLEE----------GTKKGESTEID-VTRRRNNNDSDK-- 129
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY--KPGN----S 267
D + DW L+ H + + S AF G LATCS D ++ IW++ G+ +
Sbjct: 130 --DNDD-DWEFTLVLEGHENEIKSAAFSPSGQYLATCSRDKSIWIWEDVGANEGDDEWET 186
Query: 268 AGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 327
+ T ++D KCV GR I S D++A+A DD IRI++E+ GD +
Sbjct: 187 VAVLT-EHDGDVKCVAWCPDVPGRNISSYS----PDVLASASYDDTIRIWRED---GDGE 238
Score = 52 (23.4 bits), Expect = 9.1e-27, Sum P(2) = 9.1e-27
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 354 VPGMLASCSDDGDVKLWQIK 373
V ML + DDG V+ WQ+K
Sbjct: 422 VEEMLVTTGDDGIVQAWQLK 441
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 284 (105.0 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 68/215 (31%), Positives = 103/215 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++GH RV V+W+P G + + D++ RLW E+ + + +GH + + A+
Sbjct: 318 IEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEA-----QEEILHQEGHSMGVYDIAF 372
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G+ + DA VWD R+G+ C LEGH E+ + +S NG +AT S D +
Sbjct: 373 HQDGSLAGTGGLDAFGRVWDLRTGR--CIMFLEGHLKEIYGINFSPNGYHIATGSGDNTC 430
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWIN 224
VW++ + C I AH V V+F P N L + +YD+T K++ W
Sbjct: 431 KVWDLRQR---RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW----THPGWSP 483
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
TL H V L G +ATCS D T K+W
Sbjct: 484 LKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 198 (74.8 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 60/237 (25%), Positives = 111/237 (46%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTM--------ISSCGEDKNIRLWGKESFGNKFTAK 89
C +++ TL+GH V + ++P+ T+ ++SC D +++LW +S ++ A
Sbjct: 262 CNLLH--TLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDS--DEPVAD 317
Query: 90 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 149
+GH + W P G F+ + +D + +WD + Q E EGH V + +
Sbjct: 318 I---EGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEA-QEEI-LHQEGHSMGVYDIAF 372
Query: 150 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209
++G T D VW++ C + H++++ + F P +A+ S D+T
Sbjct: 373 HQDGSLAGTGGLDAFGRVWDLRTG---RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNT 429
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPG 265
K++ D + + T+ +H + V + F+ I G+ L T + D T KIW PG
Sbjct: 430 CKVW--DLRQRRCVY--TIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTH--PG 480
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
RC M L+GH ++ ++++P G I++ D ++W +T A H
Sbjct: 397 RCIMF----LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPA-----H 447
Query: 97 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
Q + + P GNF+ + ++D T +W G TL GHE +V + S +GQ
Sbjct: 448 QNLVTGVKFEPIHGNFLLTGAYDNTAKIWT-HPGWSPLK-TLAGHEGKVMGLDISSDGQL 505
Query: 156 LATCSRDKSVWVW 168
+ATCS D++ +W
Sbjct: 506 IATCSYDRTFKLW 518
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 57/225 (25%), Positives = 97/225 (43%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA--TLEGHENEV-------K 145
G R I +SP +A+A + +W +CN TL GH V K
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVP----DCNLLHTLRGHNTNVGAIVFHPK 283
Query: 146 S-VTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204
S V+ + LA+C+ D SV +W + D E A I H V +V +HP L +
Sbjct: 284 STVSLDQKDVNLASCAADGSVKLWSL---DSDEPVADIEGHTVRVARVTWHPSGRFLGTT 340
Query: 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
YD + +L+ + +A+ + ++ + H+ V+ +AF + GS T DA ++W + +
Sbjct: 341 CYDRSWRLW-DLEAQEEILH---QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW-DLRT 395
Query: 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 309
G ++ + +G+H T + C + DL C
Sbjct: 396 GRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRC 440
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 283 (104.7 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 69/216 (31%), Positives = 105/216 (48%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL-SDGHQRTIRETA 104
++GH RV V+W+P G + + D + RLW E + IL +GH + + +
Sbjct: 304 IEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLE------VQEEILHQEGHSKGVHDLH 357
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+ P G+ + D+ VWD R+G+ C LEGH E+ S+ +S NG +AT S D +
Sbjct: 358 FHPDGSLAGTGGLDSFARVWDLRTGR--CVMFLEGHIKEIYSINFSPNGFHVATGSGDNA 415
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWI 223
VW++ + C I AH V V+F P D + L + +YD+T K++ W
Sbjct: 416 CKVWDLRQR---RCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIW----THPGWS 468
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
TL H V + G +ATCS D T K+W
Sbjct: 469 PLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 202 (76.2 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 64/237 (27%), Positives = 107/237 (45%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTM--------ISSCGEDKNIRLWGKESFGNKFTAK 89
C +I +TL+GH V +S++PQ T+ ++SC D +++LW +S ++ A
Sbjct: 248 CTLI--RTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDS--DEPIAD 303
Query: 90 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 149
+GH + W P G F+ + +D + +WD Q E EGH V + +
Sbjct: 304 I---EGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEV-QEEI-LHQEGHSKGVHDLHF 358
Query: 150 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209
+G T D VW++ C + HI+++ + F P +A+ S D+
Sbjct: 359 HPDGSLAGTGGLDSFARVWDLRTG---RCVMFLEGHIKEIYSINFSPNGFHVATGSGDNA 415
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKIWKEYKPG 265
K++ D + I T+ +H + V S+ F G L T + D T KIW PG
Sbjct: 416 CKVW--DLRQRRCIY--TIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTH--PG 466
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 48/172 (27%), Positives = 79/172 (45%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRETAW 105
+GH V ++ ++P G++ + G D R+W T + ++ +GH + I +
Sbjct: 347 EGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLR------TGRCVMFLEGHIKEIYSINF 400
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKS 164
SP G +A+ S D VWD R Q C T+ H+N V SV + N G +L T + D +
Sbjct: 401 SPNGFHVATGSGDNACKVWDLR--QRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNT 458
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+W + + H V V P ++A+ SYD T KL+ +
Sbjct: 459 AKIWT---HPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLWMSE 507
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 36/133 (27%), Positives = 65/133 (48%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
RC M L+GH +++++++P G +++ D ++W +T A H
Sbjct: 383 RCVMF----LEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPA-----H 433
Query: 97 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
Q + + P G+++ + ++D T +W G TL GHE +V V S +GQ
Sbjct: 434 QNLVSSVKFQPNDGHYLLTGAYDNTAKIWT-HPGWSPLK-TLAGHEGKVMGVDLSPDGQL 491
Query: 156 LATCSRDKSVWVW 168
+ATCS D++ +W
Sbjct: 492 IATCSYDRTFKLW 504
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 282 (104.3 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 68/215 (31%), Positives = 102/215 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++GH RV V W+P G + + D++ RLW E+ + + +GH + + A+
Sbjct: 319 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA-----QEEILHQEGHSMGVYDIAF 373
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G+ + DA VWD R+G+ C LEGH E+ + +S NG +AT S D +
Sbjct: 374 HQDGSLAGTGGLDAFGRVWDLRTGR--CIMFLEGHLKEIYGINFSPNGYHIATGSGDNTC 431
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWIN 224
VW++ + C I AH V V+F P N L + +YD+T K++ W
Sbjct: 432 KVWDLRQR---RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW----THPGWSP 484
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
TL H V L G +ATCS D T K+W
Sbjct: 485 LKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519
Score = 197 (74.4 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 60/237 (25%), Positives = 111/237 (46%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTM--------ISSCGEDKNIRLWGKESFGNKFTAK 89
C +++ TL+GH V + ++P+ T+ ++SC D +++LW +S ++ A
Sbjct: 263 CNLLH--TLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDS--DEPVAD 318
Query: 90 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 149
+GH + W P G F+ + +D + +WD + Q E EGH V + +
Sbjct: 319 I---EGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA-QEEI-LHQEGHSMGVYDIAF 373
Query: 150 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209
++G T D VW++ C + H++++ + F P +A+ S D+T
Sbjct: 374 HQDGSLAGTGGLDAFGRVWDLRTG---RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNT 430
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPG 265
K++ D + + T+ +H + V + F+ I G+ L T + D T KIW PG
Sbjct: 431 CKVW--DLRQRRCVY--TIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTH--PG 481
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
RC M L+GH ++ ++++P G I++ D ++W +T A H
Sbjct: 398 RCIMF----LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPA-----H 448
Query: 97 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
Q + + P GNF+ + ++D T +W G TL GHE +V + S +GQ
Sbjct: 449 QNLVTGVKFEPIHGNFLLTGAYDNTAKIWT-HPGWSPLK-TLAGHEGKVMGLDISSDGQL 506
Query: 156 LATCSRDKSVWVW 168
+ATCS D++ +W
Sbjct: 507 IATCSYDRTFKLW 519
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 54/225 (24%), Positives = 95/225 (42%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA--TLEGHENEVKSVTWSKN 152
G R I +SP +A+A + +W +CN TL GH V ++ +
Sbjct: 229 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVP----DCNLLHTLRGHNTNVGAIVFHPK 284
Query: 153 GQF--------LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204
LA+C+ D SV +W + D E A I H V +V +HP L +
Sbjct: 285 STVSLDPKDVNLASCAADGSVKLWSL---DSDEPVADIEGHTVRVARVMWHPSGRFLGTT 341
Query: 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
YD + +L+ + +A+ + ++ + H+ V+ +AF + GS T DA ++W + +
Sbjct: 342 CYDRSWRLW-DLEAQEEILH---QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW-DLRT 396
Query: 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 309
G ++ + +G+H T + C + DL C
Sbjct: 397 GRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRC 441
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 282 (104.3 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 68/215 (31%), Positives = 102/215 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++GH RV V W+P G + + D++ RLW E+ + + +GH + + A+
Sbjct: 334 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA-----QEEILHQEGHSMGVYDIAF 388
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G+ + DA VWD R+G+ C LEGH E+ + +S NG +AT S D +
Sbjct: 389 HQDGSLAGTGGLDAFGRVWDLRTGR--CIMFLEGHLKEIYGINFSPNGYHIATGSGDNTC 446
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWIN 224
VW++ + C I AH V V+F P N L + +YD+T K++ W
Sbjct: 447 KVWDLRQR---RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW----THPGWSP 499
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
TL H V L G +ATCS D T K+W
Sbjct: 500 LKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 534
Score = 197 (74.4 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 60/237 (25%), Positives = 111/237 (46%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTM--------ISSCGEDKNIRLWGKESFGNKFTAK 89
C +++ TL+GH V + ++P+ T+ ++SC D +++LW +S ++ A
Sbjct: 278 CNLLH--TLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDS--DEPVAD 333
Query: 90 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 149
+GH + W P G F+ + +D + +WD + Q E EGH V + +
Sbjct: 334 I---EGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA-QEEI-LHQEGHSMGVYDIAF 388
Query: 150 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209
++G T D VW++ C + H++++ + F P +A+ S D+T
Sbjct: 389 HQDGSLAGTGGLDAFGRVWDLRTG---RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNT 445
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPG 265
K++ D + + T+ +H + V + F+ I G+ L T + D T KIW PG
Sbjct: 446 CKVW--DLRQRRCVY--TIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTH--PG 496
Score = 154 (59.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
RC M L+GH ++ ++++P G I++ D ++W +T A H
Sbjct: 413 RCIMF----LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPA-----H 463
Query: 97 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
Q + + P GNF+ + ++D T +W G TL GHE +V + S +GQ
Sbjct: 464 QNLVTGVKFEPIHGNFLLTGAYDNTAKIWT-HPGWSPLK-TLAGHEGKVMGLDISSDGQL 521
Query: 156 LATCSRDKSVWVW 168
+ATCS D++ +W
Sbjct: 522 IATCSYDRTFKLW 534
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 57/225 (25%), Positives = 97/225 (43%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA--TLEGHENEV-------K 145
G R I +SP +A+A + +W +CN TL GH V K
Sbjct: 244 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVP----DCNLLHTLRGHNTNVGAIVFHPK 299
Query: 146 S-VTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204
S V+ + LA+C+ D SV +W + D E A I H V +V +HP L +
Sbjct: 300 STVSLDQKDVNLASCAADGSVKLWSL---DSDEPVADIEGHTVRVARVMWHPSGRFLGTT 356
Query: 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
YD + +L+ + +A+ + ++ + H+ V+ +AF + GS T DA ++W + +
Sbjct: 357 CYDRSWRLW-DLEAQEEILH---QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW-DLRT 411
Query: 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 309
G ++ + +G+H T + C + DL C
Sbjct: 412 GRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRC 456
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 282 (104.3 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 68/215 (31%), Positives = 102/215 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++GH RV V W+P G + + D++ RLW E+ + + +GH + + A+
Sbjct: 336 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA-----QEEILHQEGHSMGVYDIAF 390
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G+ + DA VWD R+G+ C LEGH E+ + +S NG +AT S D +
Sbjct: 391 HQDGSLAGTGGLDAFGRVWDLRTGR--CIMFLEGHLKEIYGINFSPNGYHIATGSGDNTC 448
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWIN 224
VW++ + C I AH V V+F P N L + +YD+T K++ W
Sbjct: 449 KVWDLRQR---RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW----THPGWSP 501
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
TL H V L G +ATCS D T K+W
Sbjct: 502 LKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 536
Score = 197 (74.4 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 60/237 (25%), Positives = 111/237 (46%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTM--------ISSCGEDKNIRLWGKESFGNKFTAK 89
C +++ TL+GH V + ++P+ T+ ++SC D +++LW +S ++ A
Sbjct: 280 CNLLH--TLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDS--DEPVAD 335
Query: 90 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 149
+GH + W P G F+ + +D + +WD + Q E EGH V + +
Sbjct: 336 I---EGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA-QEEI-LHQEGHSMGVYDIAF 390
Query: 150 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209
++G T D VW++ C + H++++ + F P +A+ S D+T
Sbjct: 391 HQDGSLAGTGGLDAFGRVWDLRTG---RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNT 447
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPG 265
K++ D + + T+ +H + V + F+ I G+ L T + D T KIW PG
Sbjct: 448 CKVW--DLRQRRCVY--TIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTH--PG 498
Score = 154 (59.3 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
RC M L+GH ++ ++++P G I++ D ++W +T A H
Sbjct: 415 RCIMF----LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPA-----H 465
Query: 97 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
Q + + P GNF+ + ++D T +W G TL GHE +V + S +GQ
Sbjct: 466 QNLVTGVKFEPIHGNFLLTGAYDNTAKIWT-HPGWSPLK-TLAGHEGKVMGLDISSDGQL 523
Query: 156 LATCSRDKSVWVW 168
+ATCS D++ +W
Sbjct: 524 IATCSYDRTFKLW 536
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 57/225 (25%), Positives = 97/225 (43%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA--TLEGHENEV-------K 145
G R I +SP +A+A + +W +CN TL GH V K
Sbjct: 246 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVP----DCNLLHTLRGHNTNVGAIVFHPK 301
Query: 146 S-VTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204
S V+ + LA+C+ D SV +W + D E A I H V +V +HP L +
Sbjct: 302 STVSLDQKDVNLASCAADGSVKLWSL---DSDEPVADIEGHTVRVARVMWHPSGRFLGTT 358
Query: 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
YD + +L+ + +A+ + ++ + H+ V+ +AF + GS T DA ++W + +
Sbjct: 359 CYDRSWRLW-DLEAQEEILH---QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW-DLRT 413
Query: 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 309
G ++ + +G+H T + C + DL C
Sbjct: 414 GRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRC 458
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 282 (104.3 bits), Expect = 5.6e-24, P = 5.6e-24
Identities = 71/220 (32%), Positives = 111/220 (50%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q L+GH+ V +VS++ +++S +D+ +++W E+ + T +GH +R
Sbjct: 290 QALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTL-----EGHSDLVRSV 344
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+S +ASAS D+T +WD +G + TLEGH + V+SV +S + Q LA+ S D
Sbjct: 345 IFSHDSRLLASAS-DSTVKIWDTGTGSLQ--HTLEGHRDWVRSVIFSHDSQLLASASDDS 401
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
+V +W+ G + H V+ V F +LASAS D TVK++
Sbjct: 402 TVKIWDTGTGSLQH---TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQH- 457
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
TL+ H V S+ F LA+ SDD TV+IW K
Sbjct: 458 ---TLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEK 494
Score = 263 (97.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 68/215 (31%), Positives = 112/215 (52%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH V +V ++ +++S D +++W + + T +GH+ +R
Sbjct: 333 TLEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTL-----EGHRDWVRSVI 386
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+S +ASAS D+T +WD +G + TLEGH + V+SV +S + Q LA+ S D +
Sbjct: 387 FSHDSQLLASASDDSTVKIWDTGTGSLQ--HTLEGHRDWVRSVIFSHDSQLLASASDDST 444
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W+ G + H V+ V F +LASAS D TV+++ +K +
Sbjct: 445 VKIWDTGTGSLQH---TLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGS----H 497
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
TL+ H+S V S++F LA+ S+D TV+IW
Sbjct: 498 KHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIW 532
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 78/272 (28%), Positives = 122/272 (44%)
Query: 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKV 192
C LEGHE V SV++S + + LA+ S D++V +W+ E + + H V+ V
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDT-ETGSLQ--HTLEGHSDLVRSV 344
Query: 193 RFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252
F +LASAS D TVK++ TL+ H V S+ F LA+ SD
Sbjct: 345 IFSHDSRLLASAS-DSTVKIWDTGTGSLQH----TLEGHRDWVRSVIFSHDSQLLASASD 399
Query: 253 DATVKIW-------KEYKPGN------------SAGIPTPDNDS---VWKCVC-----TL 285
D+TVKIW + G+ S + + +DS +W TL
Sbjct: 400 DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTL 459
Query: 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDV 345
GH + + + H + L+A+A D +RI+ + E G HT H+ V
Sbjct: 460 EGHRD-WVRSVIFSHDSRLLASASDDRTVRIW--DTEKGSHK-------HTLE-GHSSLV 508
Query: 346 NCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377
V+++ +LAS S+D V++W I+ +L
Sbjct: 509 TSVSFSHD-SRLLASASNDQTVRIWDIEARSL 539
Score = 178 (67.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/126 (30%), Positives = 70/126 (55%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH+ V +V ++ +++S +D +++W + + T +GH+ +R
Sbjct: 416 TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTL-----EGHRDWVRSVI 470
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+S +ASAS D T +WD G + TLEGH + V SV++S + + LA+ S D++
Sbjct: 471 FSHDSRLLASASDDRTVRIWDTEKGSHK--HTLEGHSSLVTSVSFSHDSRLLASASNDQT 528
Query: 165 VWVWEV 170
V +W++
Sbjct: 529 VRIWDI 534
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 282 (104.3 bits), Expect = 8.3e-24, P = 8.3e-24
Identities = 69/214 (32%), Positives = 103/214 (48%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH G V++ +++P G + S D IRLW K A + GH + + +
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWS-----TKLNANLVCYKGHNYPVWDAQF 468
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
SP G++ AS S D T +W + + + GH ++V V W N ++AT S DK+V
Sbjct: 469 SPFGHYFASCSHDRTARIWSM--DRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTV 526
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+W+V EC + H V + P +AS D T+ ++ D + A I
Sbjct: 527 RLWDV---QTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMW--DLSTARCIT- 580
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
L H S VWSL++ GS LA+ S D TVK+W
Sbjct: 581 -PLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 613
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/151 (29%), Positives = 73/151 (48%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
+ GH V V W+P I++ DK +RLW ++ G + + GH+ + A
Sbjct: 498 MAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQT-GE--CVRIFI--GHRSMVLSLAM 552
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
SP G ++AS D T +WD + + C L GH + V S+++S G LA+ S D +V
Sbjct: 553 SPDGRYMASGDEDGTIMMWDLSTAR--CITPLMGHNSCVWSLSYSGEGSLLASGSADCTV 610
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196
+W+V + A N + ++ +R P
Sbjct: 611 KLWDVTSSTKLTKAEEKNGNSNRLRSLRTFP 641
Score = 126 (49.4 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 58/208 (27%), Positives = 80/208 (38%)
Query: 185 HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 244
H V F P + + S+S D T++L+ K A N K H VW F G
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWST-KLNA---NLVCYKGHNYPVWDAQFSPFG 472
Query: 245 SRLATCSDDATVKIWK--EYKPGNSAGIPTPDNDSV-W--KCVCTLSGHHGRTI--YDIS 297
A+CS D T +IW +P D D V W C +G +T+ +D+
Sbjct: 473 HYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQ 532
Query: 298 W--C------HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH--TEHRAHNQDVNC 347
C H + +++ A D R E G M T HN +C
Sbjct: 533 TGECVRIFIGHRSMVLSLAMSPDG-RYMASGDEDGTIMMWDLSTARCITPLMGHN---SC 588
Query: 348 VAWNPVVPG---MLASCSDDGDVKLWQI 372
V W+ G +LAS S D VKLW +
Sbjct: 589 V-WSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 44 (20.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 109 GNFIASASFDATTAVWDK-RSGQFECNATLEGHENEVKSVTWSKNGQ 154
G+ +A D++ VWD + GQ A L+ EN+ + NG+
Sbjct: 364 GSLVAGGFSDSSIKVWDMAKIGQAGSGA-LQA-ENDSSDQSIGPNGR 408
Score = 37 (18.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 136 TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172
T N + + S +G +A D S+ VW++ +
Sbjct: 347 TFVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDMAK 383
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 278 (102.9 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 68/215 (31%), Positives = 103/215 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++GH RV V W+P G + + D + RLW E+ + + +GH + + + A+
Sbjct: 318 IEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEA-----QEEILHQEGHSKGVYDIAF 372
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G+ + DA VWD R+G+ C LEGH E+ + +S NG +AT S D +
Sbjct: 373 HTDGSLAGTGGLDAFGRVWDLRTGR--CIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTC 430
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWIN 224
VW++ + +C I AH V V+F P N L + +YD+T K++ W
Sbjct: 431 KVWDLRQR---KCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIW----THPGWSP 483
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
TL H V L G +ATCS D T K+W
Sbjct: 484 LKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLW 518
Score = 197 (74.4 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 61/237 (25%), Positives = 109/237 (45%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTM--------ISSCGEDKNIRLWGKESFGNKFTAK 89
C +++ TL+GH V + ++P+ T+ ++SC D +++LW ES ++ A
Sbjct: 262 CNLVH--TLRGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLES--DEPVAD 317
Query: 90 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 149
+GH + W P G F+ + +D + +WD + Q E EGH V + +
Sbjct: 318 I---EGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEA-QEEI-LHQEGHSKGVYDIAF 372
Query: 150 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209
+G T D VW++ C + H++++ + F P +A+ S D+T
Sbjct: 373 HTDGSLAGTGGLDAFGRVWDLRTG---RCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNT 429
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKIWKEYKPG 265
K++ D + I T+ +H + V + F+ G+ L T + D T KIW PG
Sbjct: 430 CKVW--DLRQRKCIY--TIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTH--PG 480
Score = 146 (56.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 37/133 (27%), Positives = 64/133 (48%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
RC M L+GH ++ ++++P G +++ D ++W +T A H
Sbjct: 397 RCIMF----LEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPA-----H 447
Query: 97 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
Q + + P GNF+ + ++D T +W G TL GHE +V + S +GQ
Sbjct: 448 QNLVTGVKFEPNHGNFLLTGAYDNTAKIWT-HPGWSPLK-TLAGHEGKVMGLDISLDGQL 505
Query: 156 LATCSRDKSVWVW 168
+ATCS D++ +W
Sbjct: 506 IATCSYDRTFKLW 518
Score = 144 (55.7 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 55/225 (24%), Positives = 96/225 (42%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA--TLEGHENEVKSVTW--- 149
G R + +SP +A+A + +W +CN TL GH V ++ +
Sbjct: 228 GDDRPLSYCHFSPNSKLLATACWSGLCKLWSVP----DCNLVHTLRGHSTNVGAIVFHPK 283
Query: 150 -----SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204
K LA+C+ D SV +W + E DE A I H V +V +HP L +
Sbjct: 284 ATVSLDKKDVNLASCAADGSVKLWSL-ESDEP--VADIEGHSMRVARVMWHPSGRFLGTT 340
Query: 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
YD + +L+ + +A+ + ++ + H+ V+ +AF GS T DA ++W + +
Sbjct: 341 CYDHSWRLW-DLEAQEEILH---QEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVW-DLRT 395
Query: 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 309
G ++ + +G+H T + C + DL C
Sbjct: 396 GRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKC 440
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 278 (102.9 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 67/215 (31%), Positives = 103/215 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++GH RV V W+P G + + D++ RLW E+ + + +GH + + A+
Sbjct: 318 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA-----QEEILHQEGHSMGVYDIAF 372
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G+ + DA VWD R+G+ C LEGH E+ +++S NG +AT S D +
Sbjct: 373 HQDGSLAGTGGLDAFGRVWDLRTGR--CIMFLEGHLKEIYGISFSPNGYHIATGSGDNTC 430
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWIN 224
VW++ + C I AH V V+F P + L + +YD+T K++ W
Sbjct: 431 KVWDLRQR---RCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIW----THPGWSP 483
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
TL H V L G +ATCS D T K+W
Sbjct: 484 LKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 60/237 (25%), Positives = 110/237 (46%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTM--------ISSCGEDKNIRLWGKESFGNKFTAK 89
C +++ TL+GH V + ++P+ T+ ++SC D +++LW +S ++ A
Sbjct: 262 CSLLH--TLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDS--DEPVAD 317
Query: 90 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 149
+GH + W P G F+ + +D + +WD + Q E EGH V + +
Sbjct: 318 I---EGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA-QEEI-LHQEGHSMGVYDIAF 372
Query: 150 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209
++G T D VW++ C + H++++ + F P +A+ S D+T
Sbjct: 373 HQDGSLAGTGGLDAFGRVWDLRTG---RCIMFLEGHLKEIYGISFSPNGYHIATGSGDNT 429
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPG 265
K++ D + + T+ +H + V + F+ I G L T + D T KIW PG
Sbjct: 430 CKVW--DLRQRRCVY--TIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTH--PG 480
Score = 152 (58.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
RC M L+GH ++ +S++P G I++ D ++W +T A H
Sbjct: 397 RCIMF----LEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPA-----H 447
Query: 97 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
Q + + P G+F+ + ++D T +W G TL GHE +V + S +GQ
Sbjct: 448 QNLVTGVKFEPIHGDFLLTGAYDNTAKIWT-HPGWSPLK-TLAGHEGKVMGLDISSDGQL 505
Query: 156 LATCSRDKSVWVW 168
+ATCS D++ +W
Sbjct: 506 IATCSYDRTFKLW 518
Score = 137 (53.3 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 56/225 (24%), Positives = 97/225 (43%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA--TLEGHENEV-------K 145
G R I +SP +A+A + +W +C+ TL GH V K
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVP----DCSLLHTLRGHNTNVGAIVFHPK 283
Query: 146 S-VTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204
S V+ + LA+C+ D SV +W + D E A I H V +V +HP L +
Sbjct: 284 STVSLDQKDVNLASCAADGSVKLWSL---DSDEPVADIEGHTVRVARVMWHPSGRFLGTT 340
Query: 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
YD + +L+ + +A+ + ++ + H+ V+ +AF + GS T DA ++W + +
Sbjct: 341 CYDRSWRLW-DLEAQEEILH---QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW-DLRT 395
Query: 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 309
G ++ + +G+H T + C + DL C
Sbjct: 396 GRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRC 440
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 277 (102.6 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 67/215 (31%), Positives = 102/215 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++GH RV V W+P G + + D++ RLW E+ + + +GH + + A+
Sbjct: 318 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA-----QEEILHQEGHSMGVYDIAF 372
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G+ + DA VWD R+G+ C LEGH E+ + +S NG +AT S D +
Sbjct: 373 HQDGSLAGTGGLDAFGRVWDLRTGR--CIMFLEGHLKEIYGINFSPNGYHIATGSGDNTC 430
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWIN 224
VW++ + C I AH V V+F P + L + +YD+T K++ W
Sbjct: 431 KVWDLRQR---RCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIW----THPGWSP 483
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
TL H V L G +ATCS D T K+W
Sbjct: 484 LKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 60/237 (25%), Positives = 110/237 (46%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTM--------ISSCGEDKNIRLWGKESFGNKFTAK 89
C +++ TL+GH V + ++P+ T+ ++SC D +++LW +S ++ A
Sbjct: 262 CSLLH--TLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDS--DEPVAD 317
Query: 90 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 149
+GH + W P G F+ + +D + +WD + Q E EGH V + +
Sbjct: 318 I---EGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA-QEEI-LHQEGHSMGVYDIAF 372
Query: 150 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209
++G T D VW++ C + H++++ + F P +A+ S D+T
Sbjct: 373 HQDGSLAGTGGLDAFGRVWDLRTG---RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNT 429
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPG 265
K++ D + + T+ +H + V + F+ I G L T + D T KIW PG
Sbjct: 430 CKVW--DLRQRRCVY--TIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTH--PG 480
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/133 (27%), Positives = 64/133 (48%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
RC M L+GH ++ ++++P G I++ D ++W +T A H
Sbjct: 397 RCIMF----LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPA-----H 447
Query: 97 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
Q + + P G+F+ + ++D T +W G TL GHE +V + S +GQ
Sbjct: 448 QNLVTGVKFEPIHGDFLLTGAYDNTAKIWT-HPGWSPLK-TLAGHEGKVMGLDISSDGQL 505
Query: 156 LATCSRDKSVWVW 168
+ATCS D++ +W
Sbjct: 506 IATCSYDRTFKLW 518
Score = 136 (52.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 56/225 (24%), Positives = 97/225 (43%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA--TLEGHENEV-------K 145
G R I +SP +A+A + +W +C+ TL GH V K
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVP----DCSLLHTLRGHNTNVGAIVFHPK 283
Query: 146 S-VTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204
S V+ + LA+C+ D SV +W + D E A I H V +V +HP L +
Sbjct: 284 STVSLDQKDVNLASCAADGSVKLWSL---DSDEPVADIEGHTVRVARVMWHPSGRFLGTT 340
Query: 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
YD + +L+ + +A+ + ++ + H+ V+ +AF + GS T DA ++W + +
Sbjct: 341 CYDRSWRLW-DLEAQEEILH---QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW-DLRT 395
Query: 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 309
G ++ + +G+H T + C + DL C
Sbjct: 396 GRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRC 440
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 273 (101.2 bits), Expect = 7.5e-23, P = 7.5e-23
Identities = 66/186 (35%), Positives = 97/186 (52%)
Query: 78 GKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL 137
GKE + K IL+ GH+ I + P + + SAS DAT VWD SG+FE TL
Sbjct: 88 GKEDALPRPPEKHILT-GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFE--RTL 144
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
+GH N V+ + + K G LA+CS D ++ +W+ Y+C ++ H +V VRF P
Sbjct: 145 KGHTNAVQDIDFDKTGNLLASCSADLTIKLWDF---QTYDCVKTLHGHDHNVSCVRFTPS 201
Query: 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257
+ L S+S D T+K+++ A TL H V + GS +A+CS+D T+K
Sbjct: 202 GDQLISSSRDKTIKVWEA----ATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIK 257
Query: 258 IWKEYK 263
W K
Sbjct: 258 TWNIVK 263
Score = 265 (98.3 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 94/347 (27%), Positives = 158/347 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ + +V ++P +++ S ED I++W ES + T K GH +++ +
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLK-----GHTNAVQDIDF 156
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
GN +AS S D T +WD ++ ++C TL GH++ V V ++ +G L + SRDK++
Sbjct: 157 DKTGNLLASCSADLTIKLWDFQT--YDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTI 214
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
VWE Y C + H V+K+ + +AS S D T+K + K E
Sbjct: 215 KVWEAATG--Y-CIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGEC----L 267
Query: 226 ATLKSHTSTVWSLAF------DRIGSRLATCSDDATVKIWKEYKPGNSAG----IPTPDN 275
AT + H+ V LAF D GS L+T + VK + GN G + T
Sbjct: 268 ATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVK---QGPGGNLVGQCGYLATGSR 324
Query: 276 DS---VW-----KCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDS 326
D +W +C+ T GH + + + H + GDD IR++
Sbjct: 325 DKTIKIWELATGRCLATYIGHDN-WVRAVRF-HPCGKFLLSVGDDKTIRVW--------- 373
Query: 327 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
D+ + T + AH ++C+ + P + DD +K+W+++
Sbjct: 374 DIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDV-IKVWKLQ 419
Score = 239 (89.2 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 77/290 (26%), Positives = 134/290 (46%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++ ++ G +++SC D I+LW +++ K + GH +
Sbjct: 142 RTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYD---CVKTL--HGHDHNVSCV 196
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++P G+ + S+S D T VW+ +G C TL GHE+ V+ +T S++G +A+CS D+
Sbjct: 197 RFTPSGDQLISSSRDKTIKVWEAATGY--CIKTLVGHEDWVRKITVSEDGSCIASCSNDQ 254
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD------NILASASYDDTVKLFKEDK 217
++ W + + EC A H V+ + F + ++L++ VK
Sbjct: 255 TIKTWNIVKG---ECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGN 311
Query: 218 AEADWINFAT-LKSHTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDN 275
AT + T +W LA R LAT D V+ + + P + D+
Sbjct: 312 LVGQCGYLATGSRDKTIKIWELATGRC---LATYIGHDNWVRAVR-FHPCGKFLLSVGDD 367
Query: 276 DS--VW-----KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318
+ VW +C+ T++ H I + +C IAT DD I+++K
Sbjct: 368 KTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWK 417
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 68/221 (30%), Positives = 108/221 (48%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH V +V ++P G ++S DK I++WG ++ KF K I GH+ I + A
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG--AYDGKFE-KTI--SGHKLGISDVA 68
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WS N + SAS D T +WD SG+ C TL+GH N V ++ + + S D+S
Sbjct: 69 WSSDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 126
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W+V +C + AH V V F+ +++ S+SYD +++ D A +
Sbjct: 127 VRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLK 181
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
+ V + F G + + D T+K+W +Y G
Sbjct: 182 -TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG 220
Score = 203 (76.5 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 55/220 (25%), Positives = 104/220 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+T+ GH+ + +V+W+ ++ S +DK +++W S T K GH +
Sbjct: 55 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCC 109
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++P N I S SFD + +WD ++G+ C TL H + V +V ++++G + + S D
Sbjct: 110 NFNPQSNLIVSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 167
Query: 164 SVWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+W+ +C +I+ V V+F P + +A+ D+T+KL+ K +
Sbjct: 168 LCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-- 222
Query: 223 INFATLKSHTSTVWSLA--FDRIGSR-LATCSDDATVKIW 259
T H + + + F G + + + S+D V IW
Sbjct: 223 --LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 260
Score = 189 (71.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 60/225 (26%), Positives = 105/225 (46%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRE 102
+TLKGH V+ ++NPQ +I S D+++R+W + T K + + H +
Sbjct: 97 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSA 150
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSR 161
++ G+ I S+S+D +WD SGQ C TL +N V V +S NG+++ +
Sbjct: 151 VHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATL 208
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDK 217
D ++ +W+ + +C H ++ K F F + S S D+ V ++
Sbjct: 209 DNTLKLWDYSKG---KCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 264
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWK 260
E L+ HT V S A + +A+ + +D T+K+WK
Sbjct: 265 KEI----VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 305
Score = 188 (71.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 54/178 (30%), Positives = 86/178 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL H V V +N G++I S D R+W S G K ++ D + +
Sbjct: 139 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP-PVSFV 194
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWS-KNGQFLATCS 160
+SP G +I +A+ D T +WD G+ C T GH+NE + +S G+++ + S
Sbjct: 195 KFSPNGKYILAATLDNTLKLWDYSKGK--CLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 252
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKED 216
D V++W + + E + H V HP +NI+ASA+ D T+KL+K D
Sbjct: 253 EDNLVYIWNLQTK---EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 307
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 68/221 (30%), Positives = 108/221 (48%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH V +V ++P G ++S DK I++WG ++ KF K I GH+ I + A
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG--AYDGKFE-KTI--SGHKLGISDVA 94
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WS N + SAS D T +WD SG+ C TL+GH N V ++ + + S D+S
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W+V +C + AH V V F+ +++ S+SYD +++ D A +
Sbjct: 153 VRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLK 207
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
+ V + F G + + D T+K+W +Y G
Sbjct: 208 -TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG 246
Score = 203 (76.5 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 55/220 (25%), Positives = 104/220 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+T+ GH+ + +V+W+ ++ S +DK +++W S T K GH +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCC 135
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++P N I S SFD + +WD ++G+ C TL H + V +V ++++G + + S D
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 164 SVWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+W+ +C +I+ V V+F P + +A+ D+T+KL+ K +
Sbjct: 194 LCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-- 248
Query: 223 INFATLKSHTSTVWSLA--FDRIGSR-LATCSDDATVKIW 259
T H + + + F G + + + S+D V IW
Sbjct: 249 --LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Score = 189 (71.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 60/225 (26%), Positives = 105/225 (46%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRE 102
+TLKGH V+ ++NPQ +I S D+++R+W + T K + + H +
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSA 176
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSR 161
++ G+ I S+S+D +WD SGQ C TL +N V V +S NG+++ +
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATL 234
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDK 217
D ++ +W+ + +C H ++ K F F + S S D+ V ++
Sbjct: 235 DNTLKLWDYSKG---KCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWK 260
E L+ HT V S A + +A+ + +D T+K+WK
Sbjct: 291 KEI----VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 188 (71.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 54/178 (30%), Positives = 86/178 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL H V V +N G++I S D R+W S G K ++ D + +
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP-PVSFV 220
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWS-KNGQFLATCS 160
+SP G +I +A+ D T +WD G+ C T GH+NE + +S G+++ + S
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGK--CLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKED 216
D V++W + + E + H V HP +NI+ASA+ D T+KL+K D
Sbjct: 279 EDNLVYIWNLQTK---EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 68/221 (30%), Positives = 108/221 (48%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH V +V ++P G ++S DK I++WG ++ KF K I GH+ I + A
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG--AYDGKFE-KTI--SGHKLGISDVA 94
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WS N + SAS D T +WD SG+ C TL+GH N V ++ + + S D+S
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W+V +C + AH V V F+ +++ S+SYD +++ D A +
Sbjct: 153 VRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLK 207
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
+ V + F G + + D T+K+W +Y G
Sbjct: 208 -TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG 246
Score = 203 (76.5 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 55/220 (25%), Positives = 104/220 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+T+ GH+ + +V+W+ ++ S +DK +++W S T K GH +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCC 135
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++P N I S SFD + +WD ++G+ C TL H + V +V ++++G + + S D
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 164 SVWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+W+ +C +I+ V V+F P + +A+ D+T+KL+ K +
Sbjct: 194 LCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-- 248
Query: 223 INFATLKSHTSTVWSLA--FDRIGSR-LATCSDDATVKIW 259
T H + + + F G + + + S+D V IW
Sbjct: 249 --LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Score = 189 (71.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 60/225 (26%), Positives = 105/225 (46%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRE 102
+TLKGH V+ ++NPQ +I S D+++R+W + T K + + H +
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSA 176
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSR 161
++ G+ I S+S+D +WD SGQ C TL +N V V +S NG+++ +
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATL 234
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDK 217
D ++ +W+ + +C H ++ K F F + S S D+ V ++
Sbjct: 235 DNTLKLWDYSKG---KCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWK 260
E L+ HT V S A + +A+ + +D T+K+WK
Sbjct: 291 KEI----VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 188 (71.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 54/178 (30%), Positives = 86/178 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL H V V +N G++I S D R+W S G K ++ D + +
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP-PVSFV 220
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWS-KNGQFLATCS 160
+SP G +I +A+ D T +WD G+ C T GH+NE + +S G+++ + S
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGK--CLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKED 216
D V++W + + E + H V HP +NI+ASA+ D T+KL+K D
Sbjct: 279 EDNLVYIWNLQTK---EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 68/221 (30%), Positives = 108/221 (48%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH V +V ++P G ++S DK I++WG ++ KF K I GH+ I + A
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG--AYDGKFE-KTI--SGHKLGISDVA 94
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WS N + SAS D T +WD SG+ C TL+GH N V ++ + + S D+S
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W+V +C + AH V V F+ +++ S+SYD +++ D A +
Sbjct: 153 VRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLK 207
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
+ V + F G + + D T+K+W +Y G
Sbjct: 208 -TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG 246
Score = 203 (76.5 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 55/220 (25%), Positives = 104/220 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+T+ GH+ + +V+W+ ++ S +DK +++W S T K GH +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCC 135
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++P N I S SFD + +WD ++G+ C TL H + V +V ++++G + + S D
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 164 SVWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+W+ +C +I+ V V+F P + +A+ D+T+KL+ K +
Sbjct: 194 LCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-- 248
Query: 223 INFATLKSHTSTVWSLA--FDRIGSR-LATCSDDATVKIW 259
T H + + + F G + + + S+D V IW
Sbjct: 249 --LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Score = 189 (71.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 60/225 (26%), Positives = 105/225 (46%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRE 102
+TLKGH V+ ++NPQ +I S D+++R+W + T K + + H +
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSA 176
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSR 161
++ G+ I S+S+D +WD SGQ C TL +N V V +S NG+++ +
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATL 234
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDK 217
D ++ +W+ + +C H ++ K F F + S S D+ V ++
Sbjct: 235 DNTLKLWDYSKG---KCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWK 260
E L+ HT V S A + +A+ + +D T+K+WK
Sbjct: 291 KEI----VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 188 (71.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 54/178 (30%), Positives = 86/178 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL H V V +N G++I S D R+W S G K ++ D + +
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP-PVSFV 220
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWS-KNGQFLATCS 160
+SP G +I +A+ D T +WD G+ C T GH+NE + +S G+++ + S
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGK--CLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKED 216
D V++W + + E + H V HP +NI+ASA+ D T+KL+K D
Sbjct: 279 EDNLVYIWNLQTK---EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 68/221 (30%), Positives = 108/221 (48%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH V +V ++P G ++S DK I++WG ++ KF K I GH+ I + A
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG--AYDGKFE-KTI--SGHKLGISDVA 94
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WS N + SAS D T +WD SG+ C TL+GH N V ++ + + S D+S
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W+V +C + AH V V F+ +++ S+SYD +++ D A +
Sbjct: 153 VRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLK 207
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
+ V + F G + + D T+K+W +Y G
Sbjct: 208 -TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG 246
Score = 203 (76.5 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 55/220 (25%), Positives = 104/220 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+T+ GH+ + +V+W+ ++ S +DK +++W S T K GH +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCC 135
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++P N I S SFD + +WD ++G+ C TL H + V +V ++++G + + S D
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 164 SVWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+W+ +C +I+ V V+F P + +A+ D+T+KL+ K +
Sbjct: 194 LCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-- 248
Query: 223 INFATLKSHTSTVWSLA--FDRIGSR-LATCSDDATVKIW 259
T H + + + F G + + + S+D V IW
Sbjct: 249 --LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Score = 189 (71.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 60/225 (26%), Positives = 105/225 (46%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRE 102
+TLKGH V+ ++NPQ +I S D+++R+W + T K + + H +
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSA 176
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSR 161
++ G+ I S+S+D +WD SGQ C TL +N V V +S NG+++ +
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATL 234
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDK 217
D ++ +W+ + +C H ++ K F F + S S D+ V ++
Sbjct: 235 DNTLKLWDYSKG---KCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWK 260
E L+ HT V S A + +A+ + +D T+K+WK
Sbjct: 291 KEI----VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 188 (71.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 54/178 (30%), Positives = 86/178 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL H V V +N G++I S D R+W S G K ++ D + +
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP-PVSFV 220
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWS-KNGQFLATCS 160
+SP G +I +A+ D T +WD G+ C T GH+NE + +S G+++ + S
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGK--CLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKED 216
D V++W + + E + H V HP +NI+ASA+ D T+KL+K D
Sbjct: 279 EDNLVYIWNLQTK---EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 68/221 (30%), Positives = 108/221 (48%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH V +V ++P G ++S DK I++WG ++ KF K I GH+ I + A
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG--AYDGKFE-KTI--SGHKLGISDVA 94
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WS N + SAS D T +WD SG+ C TL+GH N V ++ + + S D+S
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W+V +C + AH V V F+ +++ S+SYD +++ D A +
Sbjct: 153 VRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLK 207
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
+ V + F G + + D T+K+W +Y G
Sbjct: 208 -TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG 246
Score = 203 (76.5 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 55/220 (25%), Positives = 104/220 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+T+ GH+ + +V+W+ ++ S +DK +++W S T K GH +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCC 135
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++P N I S SFD + +WD ++G+ C TL H + V +V ++++G + + S D
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 164 SVWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+W+ +C +I+ V V+F P + +A+ D+T+KL+ K +
Sbjct: 194 LCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-- 248
Query: 223 INFATLKSHTSTVWSLA--FDRIGSR-LATCSDDATVKIW 259
T H + + + F G + + + S+D V IW
Sbjct: 249 --LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Score = 189 (71.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 60/225 (26%), Positives = 105/225 (46%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRE 102
+TLKGH V+ ++NPQ +I S D+++R+W + T K + + H +
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSA 176
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSR 161
++ G+ I S+S+D +WD SGQ C TL +N V V +S NG+++ +
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATL 234
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDK 217
D ++ +W+ + +C H ++ K F F + S S D+ V ++
Sbjct: 235 DNTLKLWDYSKG---KCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWK 260
E L+ HT V S A + +A+ + +D T+K+WK
Sbjct: 291 KEI----VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 188 (71.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 54/178 (30%), Positives = 86/178 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL H V V +N G++I S D R+W S G K ++ D + +
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP-PVSFV 220
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWS-KNGQFLATCS 160
+SP G +I +A+ D T +WD G+ C T GH+NE + +S G+++ + S
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGK--CLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKED 216
D V++W + + E + H V HP +NI+ASA+ D T+KL+K D
Sbjct: 279 EDNLVYIWNLQTK---EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 68/221 (30%), Positives = 108/221 (48%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH V +V ++P G ++S DK I++WG ++ KF K I GH+ I + A
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG--AYDGKFE-KTI--SGHKLGISDVA 94
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WS N + SAS D T +WD SG+ C TL+GH N V ++ + + S D+S
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W+V +C + AH V V F+ +++ S+SYD +++ D A +
Sbjct: 153 VRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLK 207
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
+ V + F G + + D T+K+W +Y G
Sbjct: 208 -TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG 246
Score = 202 (76.2 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 54/218 (24%), Positives = 105/218 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+T+ GH+ + +V+W+ ++ S +DK +++W S T K GH +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCC 135
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++P N I S SFD + +WD ++G+ C TL H + V +V ++++G + + S D
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 164 SVWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+W+ +C +I+ V V+F P + +A+ D+T+KL+ K +
Sbjct: 194 LCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-L 249
Query: 223 INFATLKSHTSTVWSLAFDRIGSR-LATCSDDATVKIW 259
+ K+ +++ F G + + + S+D V IW
Sbjct: 250 KTYTCHKNEKYCIFA-NFSVTGGKWIVSGSEDNLVYIW 286
Score = 190 (71.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 60/225 (26%), Positives = 105/225 (46%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRE 102
+TLKGH V+ ++NPQ +I S D+++R+W + T K + + H +
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK------TGKCLKTLPAHSDPVSA 176
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSR 161
++ G+ I S+S+D +WD SGQ C TL +N V V +S NG+++ +
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATL 234
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDK 217
D ++ +W+ + +C H ++ K F F + S S D+ V ++
Sbjct: 235 DNTLKLWDYSKG---KCLKTYTCH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWK 260
E L+ HT V S A + +A+ + +D T+K+WK
Sbjct: 291 KEV----VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 179 (68.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 53/178 (29%), Positives = 85/178 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL H V V +N G++I S D R+W S G K ++ D + +
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP-PVSFV 220
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWS-KNGQFLATCS 160
+SP G +I +A+ D T +WD G+ C T H+NE + +S G+++ + S
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGK--CLKTYTCHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKED 216
D V++W + + E + H V HP +NI+ASA+ D T+KL+K D
Sbjct: 279 EDNLVYIWNLQTK---EVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 64/215 (29%), Positives = 108/215 (50%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TLKGH + +V ++P G ++S DK I++WG ++ KF +GH+ I + A
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWG--AYDGKFERTL---EGHKEGISDIA 95
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WS I SAS D T +WD SG+ TL+GH+ V V+++ + + S D++
Sbjct: 96 WSQDSKLICSASDDKTIKIWDVESGKMV--KTLKGHKEYVFGVSFNPQSNLIVSGSFDEN 153
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W+V EC +I+AH V V F+ ++ S SYD TV+++ D +N
Sbjct: 154 VRIWDVNTG---ECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIW--DTTTGQLLN 208
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ + + + F G + + D T+++W
Sbjct: 209 TISTEDGKEVSF-VKFSPNGKFVLAGTLDNTLRLW 242
Score = 210 (79.0 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 51/216 (23%), Positives = 103/216 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL+GH+ + +++W+ +I S +DK I++W ES T K GH+ +
Sbjct: 82 RTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLK-----GHKEYVFGV 136
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+++P N I S SFD +WD +G EC + H + V V ++++G + + S D
Sbjct: 137 SFNPQSNLIVSGSFDENVRIWDVNTG--ECTKMISAHSDPVTGVHFNRDGTLVVSGSYDG 194
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
+V +W+ + + ++V V+F P + + + D+T++L+ + +
Sbjct: 195 TVRIWDTTTGQLLNTISTEDG--KEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLK 252
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ K+ ++S G + T S+D + I+
Sbjct: 253 TYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIY 288
Score = 192 (72.6 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 60/223 (26%), Positives = 100/223 (44%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH+ V+ VS+NPQ +I S D+N+R+W + G K I H +
Sbjct: 124 KTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNT-GE--CTKMI--SAHSDPVTGV 178
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++ G + S S+D T +WD +GQ + E + EV V +S NG+F+ + D
Sbjct: 179 HFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGK-EVSFVKFSPNGKFVLAGTLDN 237
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDKAE 219
++ +W + C H ++ K F F + + S D+ + ++ E
Sbjct: 238 TLRLWSYNNNKK--CLKTYTGH-KNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTRE 294
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLAT--CSDDATVKIWK 260
TL H V ++A + +A+ D +VKIWK
Sbjct: 295 I----VQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIWK 333
Score = 161 (61.7 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 46/177 (25%), Positives = 84/177 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
++ + H V V +N GT++ S D +R+W + G + DG + +
Sbjct: 165 TKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTT-GQLLNTIST-EDGKE--VSF 220
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWSKN-GQFLATC 159
+SP G F+ + + D T +W + + +C T GH+NE + T+S G+++ T
Sbjct: 221 VKFSPNGKFVLAGTLDNTLRLWSYNNNK-KCLKTYTGHKNEKYCIFSTFSVTCGKWIVTG 279
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFK 214
S D ++++ + E + H V V HP +NI+AS + D +VK++K
Sbjct: 280 SEDNLIYIYNLQTR---EIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIWK 333
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 242 (90.2 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 69/253 (27%), Positives = 119/253 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG--NKFTAKAILSDGHQRTIR 101
+TL+GH + V ++ G +++S DK + LW ++ +++ +GH I
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRY-------EGHSSGIS 89
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ AWS ++ SAS D T +WD RS +EC L GH N V V ++ + + S
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARS-PYECLKVLRGHTNFVFCVNFNPPSNLIVSGSF 148
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 221
D+++ +WEV +C +I AH + V F+ +++ SAS+D + K++ D E
Sbjct: 149 DETIRIWEVKTG---KCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW--DAKEGT 203
Query: 222 WINFATLKSHTSTVWSLA-FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280
+ TL S S A F G + + D+T+K+ Y G + T + V+
Sbjct: 204 CLK--TLIDDKSPAVSFAKFSPNGKFILVATLDSTLKL-SNYATGKFLKVYTGHTNKVFC 260
Query: 281 CVCTLSGHHGRTI 293
S +G+ I
Sbjct: 261 ITSAFSVTNGKYI 273
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 56/225 (24%), Positives = 101/225 (44%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI-LSDGHQRTIRE 102
+ L+GH V+ V++NP +I S D+ IR+W + T K + + H I
Sbjct: 122 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVK------TGKCVRMIKAHSMPISS 175
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATL-EGHENEVKSVTWSKNGQFLATCSR 161
++ G+ I SAS D + +WD + G C TL + V +S NG+F+ +
Sbjct: 176 VHFNRDGSLIVSASHDGSCKIWDAKEGT--CLKTLIDDKSPAVSFAKFSPNGKFILVATL 233
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVR--FHPFDN-ILASASYDDTVKLFKEDKA 218
D ++ ++ + V H V + F + + S S D+ V L+
Sbjct: 234 DSTL---KLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWD---L 287
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSD--DATVKIWKE 261
+A I L+ HT V S++ + + +++ + D T++IWK+
Sbjct: 288 QARNI-LQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIWKQ 331
Score = 45 (20.9 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 338 HRAHNQDVNCV--AWNPVVPGMLASCSDDGDVKLWQIKLENL 377
+ H V C+ A++ + S S+D V LW ++ N+
Sbjct: 251 YTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNI 292
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 256 (95.2 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 71/228 (31%), Positives = 113/228 (49%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T++GH V +V+++P G +++S +K I+LW + G K T GH +
Sbjct: 150 TIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTL-----GGHSNWVLPLV 204
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+SP G +AS S DAT +WD SG + TLEGH N+++S+ +S NGQ LA+ S D +
Sbjct: 205 FSPDGRLLASGSNDATIKLWDPPSGSLK--HTLEGHSNKIESLAFSPNGQLLASGSSDAT 262
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+ +W+ + H V V F P +L S S D+T+KL+ D A I
Sbjct: 263 IKLWDTATGSFRH---TLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLW--DPATG--IL 315
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPT 272
++++ V S+ F +L T +++ W P S+G T
Sbjct: 316 KHSMRT-PGIVRSIEFSIELPQLITNLGTFSIQAWHTGYPSRSSGKKT 362
Score = 190 (71.9 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 41/111 (36%), Positives = 63/111 (56%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
QTL+GH + V+++P G +++S D I+LW S G K T +GH +++
Sbjct: 35 QTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTL-----EGHSSSVQSV 89
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
A+SP G +AS S D T +W+ S + T+EGH + V+SV +S NGQ
Sbjct: 90 AFSPNGQLLASGSSDTTIKLWNSASDSLK--HTMEGHSDRVESVAFSPNGQ 138
Score = 171 (65.3 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 78/296 (26%), Positives = 125/296 (42%)
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 153
+GH I +SP G +AS S D T +WD SG + TLEGH + V+SV +S NG
Sbjct: 38 EGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLK--QTLEGHSSSVQSVAFSPNG 95
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL--ASASYDDTVK 211
Q LA+ S D ++ +W + + H V+ V F P + A S T++
Sbjct: 96 QLLASGSSDTTIKLWNSASDS---LKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIE 152
Query: 212 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL---ATCSDDATV---KIWK---EY 262
+DW+ + S + ++ +L ATC T+ W +
Sbjct: 153 ------GHSDWVLSVAFSPDGQLLASGSAEKT-IKLWDSATCGLKHTLGGHSNWVLPLVF 205
Query: 263 KPGNSAGIPTPDNDS---VW-----KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAI 314
P + + ND+ +W TL GH + I +++ L+A+ D I
Sbjct: 206 SPDGRL-LASGSNDATIKLWDPPSGSLKHTLEGHSNK-IESLAFSPNGQLLASGSSDATI 263
Query: 315 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
+++ D+ SF HT + H+ V V ++P +L S S D +KLW
Sbjct: 264 KLW-------DTATGSFR--HTL-KGHSDMVLSVVFSPDSQ-LLESGSGDNTIKLW 308
Score = 169 (64.5 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 65/249 (26%), Positives = 111/249 (44%)
Query: 136 TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195
TLEGH + +++VT+S +G+ LA+ S D ++ +W+ + + H V+ V F
Sbjct: 36 TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQ---TLEGHSSSVQSVAFS 92
Query: 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD--------RIGSRL 247
P +LAS S D T+KL+ + +D + T++ H+ V S+AF IGS
Sbjct: 93 PNGQLLASGSSDTTIKLWN---SASDSLKH-TMEGHSDRVESVAFSPNGQLWNPAIGSLK 148
Query: 248 ATCSDDATVKIWKEYKPGNS--AGIPTPDNDSVW-KCVCTLS---GHHGRTIYDISWCHL 301
T + + + P A +W C L G H + + +
Sbjct: 149 HTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPD 208
Query: 302 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 361
L+A+ D I+++ +P +G L HT H+ + +A++P +LAS
Sbjct: 209 GRLLASGSNDATIKLW--DPPSGS-------LKHTLE-GHSNKIESLAFSPNGQ-LLASG 257
Query: 362 SDDGDVKLW 370
S D +KLW
Sbjct: 258 SSDATIKLW 266
Score = 49 (22.3 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 45 TLKGHQGRVWNVSWNPQGTM 64
T++GH RV +V+++P G +
Sbjct: 120 TMEGHSDRVESVAFSPNGQL 139
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 273 (101.2 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 71/225 (31%), Positives = 107/225 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+T GH G V+ S++P + SC ED RLW E+ N K GH + +
Sbjct: 673 KTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYK-----GHNFPVWDV 727
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++SP G + A+AS D T +W + GH ++ +V + N +LAT S DK
Sbjct: 728 SFSPFGFYFATASHDRTARLWT--TNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDK 785
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
S +WE+ +C + H + V F P +LA+A D +V L+ D + +
Sbjct: 786 SARLWEI---QTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILW--DLSTGKKV 840
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268
+ HT V+SL F GS LA+ S D TV++W K NS+
Sbjct: 841 K--KMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSS 883
Score = 204 (76.9 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 62/207 (29%), Positives = 100/207 (48%)
Query: 12 DNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGED 71
D+QYLL +E+ T L S M N KGH VW+VS++P G ++ D
Sbjct: 690 DSQYLLS----CSEDTTAR---LWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHD 742
Query: 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131
+ RLW N + I + GH + P N++A+ S D + +W+ ++G+
Sbjct: 743 RTARLWTT----NHISPLRIFT-GHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGK- 796
Query: 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191
C GH + +V +S +G+ LAT D SV +W++ + + ++ H + V
Sbjct: 797 -CVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVK---KMDGHTKCVYS 852
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKA 218
+ F +ILAS S D TV+L+ KA
Sbjct: 853 LDFSCDGSILASGSSDCTVRLWDVKKA 879
Score = 120 (47.3 bits), Expect = 0.00071, P = 0.00071
Identities = 85/356 (23%), Positives = 142/356 (39%)
Query: 49 HQG-RVWNVSWNPQGTMISSCGEDKNIRLWG-KESFGNKFTAKAILSDGHQR--TIRETA 104
+QG ++S + Q +++ D ++++W KE + + Q+ +
Sbjct: 558 YQGLNTTDISKDAQ--LVAGGFSDSSVKIWNLKEMKEQRLQQQQQQQQQQQQQQNSNQNG 615
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+ GNF +SAS A++A+ N + +EN KS T + N L + S S
Sbjct: 616 YFENGNFASSAS-SASSAM----------NGSGNNNENN-KSTTANNN---LNSGSSSSS 660
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+ + +E E++ H V F P L S S D T +L+ + N
Sbjct: 661 NKLQKQQKESEFK---TFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMS----N 713
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW--KEYKP-----GNSAG-------- 269
K H VW ++F G AT S D T ++W P G+ +
Sbjct: 714 LVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHP 773
Query: 270 ----IPTPDNDS---VW-----KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 317
+ T ND +W KCV GH IY +++ L+ATA D ++ ++
Sbjct: 774 NINYLATGSNDKSARLWEIQTGKCVRIFMGHRA-PIYTVAFSPDGRLLATAGEDTSVILW 832
Query: 318 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
+ G + D HT+ ++ D +C +LAS S D V+LW +K
Sbjct: 833 --DLSTGKK-VKKMD-GHTKC-VYSLDFSCDG------SILASGSSDCTVRLWDVK 877
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 262 (97.3 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 68/243 (27%), Positives = 117/243 (48%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T +GH + +++NPQ T++++ D +LW ES G + + A GH I
Sbjct: 172 TFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVES-GEEVSTLA----GHFAEIISLC 226
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
++ G+ + + SFD T +WD SG+ + + L GH E+ V ++ + +AT S DKS
Sbjct: 227 FNTTGDRLVTGSFDHTAILWDVPSGR-KVHV-LSGHRGEISCVQFNWDCSLIATASLDKS 284
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
VW+ + +C A + H +V V F+ ++A+AS D T ++F D +
Sbjct: 285 CKVWDA---EGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQC---- 337
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 284
L+ H + + F+ GSR+ T S D T ++W K G + +D ++ C
Sbjct: 338 LCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWC-VKTGACLQVLEGHSDEIFSCAFN 396
Query: 285 LSG 287
G
Sbjct: 397 YEG 399
Score = 222 (83.2 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 67/217 (30%), Positives = 104/217 (47%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR--E 102
TL GH + ++ +N G + + D LW S G K +LS GH+ I +
Sbjct: 214 TLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPS-GRKVH---VLS-GHRGEISCVQ 268
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W C + IA+AS D + VWD GQ C ATL GH +EV V ++ GQ +AT S D
Sbjct: 269 FNWD-C-SLIATASLDKSCKVWDAEGGQ--CLATLLGHNDEVLDVCFNYTGQLIATASAD 324
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+ V+ D ++C + H ++ KV F+ + + +AS D T +++
Sbjct: 325 GTSRVFST---DTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGAC-- 379
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
L+ H+ ++S AF+ G + T S D T +IW
Sbjct: 380 --LQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 186 (70.5 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 59/241 (24%), Positives = 107/241 (44%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+ L+ H + NV++N G+ + D+ ++W S T +GH+ +
Sbjct: 86 RALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTL-----EGHRNVVYAI 140
Query: 104 AWS-PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
A++ P G+ +A+ SFD T +W +G+ C T GH E+ + ++ +AT S D
Sbjct: 141 AFNNPYGDKVATGSFDKTCKLWSAETGK--CFYTFRGHTAEIVCLAFNPQSTLVATGSMD 198
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+ +W+V +E A H ++ + F+ + L + S+D T L+ D
Sbjct: 199 TTAKLWDVESGEEVSTLA---GHFAEIISLCFNTTGDRLVTGSFDHTAILW--DVPSGRK 253
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282
++ L H + + F+ S +AT S D + K+W + + G ND V V
Sbjct: 254 VH--VLSGHRGEISCVQFNWDCSLIATASLDKSCKVW-DAEGGQCLATLLGHNDEVLD-V 309
Query: 283 C 283
C
Sbjct: 310 C 310
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 37/138 (26%), Positives = 67/138 (48%)
Query: 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI 182
V K +F L+ H + +V ++K+G T S D++ +W+ +E +
Sbjct: 74 VGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELH---TL 130
Query: 183 NAHIQDVKKVRFH-PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 241
H V + F+ P+ + +A+ S+D T KL+ + + F T + HT+ + LAF+
Sbjct: 131 EGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKC----FYTFRGHTAEIVCLAFN 186
Query: 242 RIGSRLATCSDDATVKIW 259
+ +AT S D T K+W
Sbjct: 187 PQSTLVATGSMDTTAKLW 204
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 260 (96.6 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 62/216 (28%), Positives = 102/216 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ R+ +V ++P G I S D RLW + + +L +GH + + ++
Sbjct: 261 LVGHERRISDVKYHPSGKFIGSASHDMTWRLWDASTH-----QELLLQEGHDKGVFSLSF 315
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G+ + S D+ + +WD RSG TL GH + +V WS NG +AT D +
Sbjct: 316 QCDGSLVCSGGMDSLSMLWDIRSGSKVM--TLAGHSKPIYTVAWSPNGYQVATGGGDGII 373
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN--ILASASYDDTVKLFKEDKAEADWI 223
VW++ + DE + ++ AH V +VRF D L S YD+ + ++ D W+
Sbjct: 374 NVWDIRKRDEGQLNQIL-AHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDT----WL 428
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+L HT + SL L + D ++K+W
Sbjct: 429 KMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLW 464
Score = 195 (73.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 62/257 (24%), Positives = 115/257 (44%)
Query: 21 IPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGK 79
+ +T + G +L S+ +Q L H G++ + W+P + SC ED I+ +
Sbjct: 189 VVATGSWAGDLQVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNNQMISCAEDGLIKNF-- 246
Query: 80 ESFGNKFTAKAILSD--GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL 137
+ N+ +L D GH+R I + + P G FI SAS D T +WD + Q E
Sbjct: 247 -QYSNEEGGLRLLGDLVGHERRISDVKYHPSGKFIGSASHDMTWRLWDASTHQ-EL-LLQ 303
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
EGH+ V S+++ +G + + D +W++ + A H + + V + P
Sbjct: 304 EGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLA---GHSKPIYTVAWSPN 360
Query: 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI--GSRLATCSDDAT 255
+A+ D + ++ K + +N + +H + V + F + G +L +C D
Sbjct: 361 GYQVATGGGDGIINVWDIRKRDEGQLN--QILAHRNIVTQVRFSKEDGGKKLVSCGYDNL 418
Query: 256 VKIWKE---YKPGNSAG 269
+ ++ K G+ AG
Sbjct: 419 INVYSSDTWLKMGSLAG 435
Score = 115 (45.5 bits), Expect = 0.00098, P = 0.00098
Identities = 32/126 (25%), Positives = 60/126 (47%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH ++ V+W+P G +++ G D I +W ++ IL+ H+ + +
Sbjct: 344 TLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRK-RDEGQLNQILA--HRNIVTQVR 400
Query: 105 WSP--CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+S G + S +D V+ S + +L GH +++ S+ S N FL + D
Sbjct: 401 FSKEDGGKKLVSCGYDNLINVYS--SDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWD 458
Query: 163 KSVWVW 168
+S+ +W
Sbjct: 459 RSIKLW 464
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 249 (92.7 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 70/236 (29%), Positives = 114/236 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 79 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 133
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SAS D T +W+ ++G C T GH V+ V +++G +A+CS D+
Sbjct: 134 AIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 191
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI--LASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P + ++ A+ +T K K
Sbjct: 192 TVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 248
Query: 215 --EDKAEADW-----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
DK W + TL H + V + F G + +C+DD T+++W +YK
Sbjct: 249 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-DYK 303
Score = 249 (92.7 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 88/335 (26%), Positives = 153/335 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++++ ++
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISF 93
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + SRDK++
Sbjct: 94 DHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 151
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+WEV + Y C H + V+ VR + ++AS S D TV+++ E
Sbjct: 152 KMWEV--QTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK---- 204
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK---- 280
A L+ H V +++ S ++ S+ + K KPG + D +W
Sbjct: 205 AELREHEHVVECISWAPESS-YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 263
Query: 281 -CVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH + + + H +C DD +R++ D + + T +
Sbjct: 264 MCLMTLVGHDN-WVRGVLF-HSGGKFILSCADDKTLRVW---------DYKNKRCMKTLN 312
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH V + ++ P ++ S D VK+W+ +
Sbjct: 313 -AHEHFVTSLDFHKTAPYVVTG-SVDQTVKVWECR 345
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 261 (96.9 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 69/231 (29%), Positives = 106/231 (45%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC 108
H+ V VS P ++ SCGED RLW + G + GH + + + P
Sbjct: 351 HELPVSCVSMQPHKDILVSCGED---RLW--KVLGLPKCNVLLTGFGHTDWLSDCCFHPS 405
Query: 109 GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168
G+ +A++S D T +WD G +C T EGH V S TW G F+A+ S DK+ +W
Sbjct: 406 GDKLATSSGDTTVKLWDLCKG--DCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIW 463
Query: 169 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL 228
+V E C + H V + F PF N L ++S D T+ ++ + +L
Sbjct: 464 DVNSE---RCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICE----QSL 516
Query: 229 KSHTSTVWSLAFDRIGSRLATCSDDATVKIW--KEYKPGNSAGI-PTPDND 276
H ++ FD G +A+C K+W ++ P S I P+P N+
Sbjct: 517 YGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNE 567
Score = 200 (75.5 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 57/231 (24%), Positives = 101/231 (43%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRETAWS 106
GH + + ++P G +++ D ++LW + IL+ +GH R + W
Sbjct: 392 GHTDWLSDCCFHPSGDKLATSSGDTTVKLW------DLCKGDCILTFEGHSRAVWSCTWH 445
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
CGNF+AS+S D T+ +WD S + C TL GH + V S+ + L T S DK++
Sbjct: 446 SCGNFVASSSLDKTSKIWDVNSER--CRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLS 503
Query: 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA 226
+W+ C + H+ + F P +++AS KL+ K +
Sbjct: 504 IWDARTGI---CEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKL----LPIV 556
Query: 227 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 277
++ S + FD G LA S + + + + K G + +N++
Sbjct: 557 SIDIGPSPGNEVNFDSSGRVLAQASGNGVIHLL-DLKSGEIHKLMGHENEA 606
Score = 182 (69.1 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 51/217 (23%), Positives = 89/217 (41%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T +GH VW+ +W+ G ++S DK ++W S + T GH ++
Sbjct: 431 TFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLY-----GHTDSVNSIE 485
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+ P N + ++S D T ++WD R+G C +L GH + + + G +A+C
Sbjct: 486 FFPFSNTLLTSSADKTLSIWDARTGI--CEQSLYGHMHSINDAIFDPRGHMIASCDACGV 543
Query: 165 VWVWEVGEEDEYECAAVINAHI--QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+W D + +++ I +V F +LA AS + + L E
Sbjct: 544 TKLW-----DFRKLLPIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVIHLLDLKSGEIH- 597
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
L H + ++ F G L + D TV+ W
Sbjct: 598 ----KLMGHENEAHTVVFSHDGEILFSGGSDGTVRTW 630
Score = 117 (46.2 bits), Expect = 0.00091, P = 0.00091
Identities = 37/128 (28%), Positives = 58/128 (45%)
Query: 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
I Q+L GH + + ++P+G MI+SC +LW F +I D
Sbjct: 511 ICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLW---DFRKLLPIVSI--DIGPSPG 565
Query: 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS 160
E + G +A AS + + D +SG+ L GHENE +V +S +G+ L +
Sbjct: 566 NEVNFDSSGRVLAQASGNGVIHLLDLKSGEIH---KLMGHENEAHTVVFSHDGEILFSGG 622
Query: 161 RDKSVWVW 168
D +V W
Sbjct: 623 SDGTVRTW 630
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 241 (89.9 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 69/222 (31%), Positives = 106/222 (47%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH + +V ++P G ++S D I +WG GN K L GH I + A
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYD-GN---CKKTLY-GHSLEISDVA 88
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WS + + SAS D T VWD RSG+ C TL+GH + V ++ + + S D+S
Sbjct: 89 WSSDSSRLVSASDDKTLKVWDMRSGK--CLKTLKGHSDFVFCCDFNPPSNLIVSGSFDES 146
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +WEV +C ++AH + V F+ +++ S SYD +++ D A +
Sbjct: 147 VKIWEVKTG---KCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIW--DAASGQCLR 201
Query: 225 FATLKSHTSTVWSLA-FDRIGSRLATCSDDATVKIWKEYKPG 265
TL + S F G + T + D T+K+W +Y G
Sbjct: 202 --TLADEGNPPVSFVKFSPNGKYILTATLDNTLKLW-DYSRG 240
Score = 191 (72.3 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 54/220 (24%), Positives = 101/220 (45%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL GH + +V+W+ + + S +DK +++W S T K GH +
Sbjct: 75 KTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLK-----GHSDFVFCC 129
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++P N I S SFD + +W+ ++G+ C TL H + + +V ++ NG + + S D
Sbjct: 130 DFNPPSNLIVSGSFDESVKIWEVKTGK--CLKTLSAHSDPISAVNFNCNGSLIVSGSYDG 187
Query: 164 SVWVWEVGEEDEYECAAVI-NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+W+ +C + + V V+F P + +A+ D+T+KL+ +
Sbjct: 188 LCRIWDAASG---QCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRC-- 242
Query: 223 INFATLKSHTSTVWSL--AFDRIGSR-LATCSDDATVKIW 259
T H + + L +F G + + + S+D V IW
Sbjct: 243 --LKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIW 280
Score = 175 (66.7 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 59/224 (26%), Positives = 99/224 (44%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRE 102
+TLKGH V+ +NP +I S D+++++W + T K + + H I
Sbjct: 117 KTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVK------TGKCLKTLSAHSDPISA 170
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSR 161
++ G+ I S S+D +WD SGQ C TL N V V +S NG+++ T +
Sbjct: 171 VNFNCNGSLIVSGSYDGLCRIWDAASGQ--CLRTLADEGNPPVSFVKFSPNGKYILTATL 228
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDK 217
D ++ +W+ C H ++ K F F + S S D+ V ++
Sbjct: 229 DNTLKLWDYSRG---RCLKTYTGH-KNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQT 284
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIW 259
E L+ HT V S A + +A+ + +D T+K+W
Sbjct: 285 KEI----VQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 169 (64.5 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 50/178 (28%), Positives = 86/178 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL H + V++N G++I S D R+W S G + + +G+ +
Sbjct: 159 KTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAAS-GQ--CLRTLADEGNP-PVSFV 214
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWSKNGQ-FLATCS 160
+SP G +I +A+ D T +WD G+ C T GH+NE + ++S G+ ++ + S
Sbjct: 215 KFSPNGKYILTATLDNTLKLWDYSRGR--CLKTYTGHKNEKYCLFASFSVTGRKWVVSGS 272
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKED 216
D V++W + + E + H V HP NI+ASA+ D T+K++ D
Sbjct: 273 EDNMVYIWNLQTK---EIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWSSD 327
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 254 (94.5 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 89/335 (26%), Positives = 153/335 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++++ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISF 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + SRDK++
Sbjct: 159 DHTGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+WEV + Y C H + V+ VR + ++AS S D TV+++ E
Sbjct: 217 KMWEV--QTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK---- 269
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK---- 280
A L+ H V +++ S +T S+ + K KPG + D +W
Sbjct: 270 AELREHEHVVECISWAPESS-YSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTG 328
Query: 281 -CVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH + + + H +C DD +R++ D + + T +
Sbjct: 329 MCLMTLVGHDN-WVRGVLF-HSGGKFILSCADDKTLRVW---------DFKNKRCMKTLN 377
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH V + ++ P ++ S D VK+W+ +
Sbjct: 378 -AHEHFVTSLDFHKTAPYVVTG-SVDQTVKVWECR 410
Score = 244 (91.0 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 70/236 (29%), Positives = 115/236 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SAS D T +W+ ++G C T GH V+ V +++G +A+CS D+
Sbjct: 199 AIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI--LASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P + ++ A+ +T K K
Sbjct: 257 TVRVWVVATK---ECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLS 313
Query: 215 --EDKAEADW-IN----FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
DK W I+ TL H + V + F G + +C+DD T+++W ++K
Sbjct: 314 GSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-DFK 368
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 257 (95.5 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 68/217 (31%), Positives = 105/217 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL+GH G V+ ++ + + SC ED +R W +SF N +L GH + +
Sbjct: 348 KTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTN-----TVLYRGHAYPVWDV 402
Query: 104 AWSPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
SPC + ++AS D T +W R+ A GH ++V V + N ++AT S D
Sbjct: 403 DVSPCSLYFSTASHDRTARLWSFARTYPLRLYA---GHLSDVDCVKFHPNSNYIATGSTD 459
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
K+V +W + + H V + F P LASA D +KL+ D A
Sbjct: 460 KTVRLWSTRQGASVR---LFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLW--DLASGGL 514
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
F L+ HT T+ SL+F + S +A+ S D TV++W
Sbjct: 515 --FKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVW 549
Score = 193 (73.0 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 47/172 (27%), Positives = 83/172 (48%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N+ +GH VW+V +P S+ D+ RLW SF + + L GH +
Sbjct: 388 NTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLW---SFARTYPLR--LYAGHLSDVD 442
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ P N+IA+ S D T +W R G T GH V ++ +S NG++LA+
Sbjct: 443 CVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFT--GHRGPVLTLAFSPNGKYLASAGE 500
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
D+ + +W++ ++ + H + + F +++ASAS D+TV+++
Sbjct: 501 DQRLKLWDLASGGLFKD---LRGHTDTISSLSFSQDSSLVASASMDNTVRVW 549
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 39/123 (31%), Positives = 63/123 (51%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH V V ++P I++ DK +RLW G A L GH+ + A+SP
Sbjct: 436 GHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQ-G----ASVRLFTGHRGPVLTLAFSP 490
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G ++ASA D +WD SG + L GH + + S+++S++ +A+ S D +V V
Sbjct: 491 NGKYLASAGEDQRLKLWDLASGGLFKD--LRGHTDTISSLSFSQDSSLVASASMDNTVRV 548
Query: 168 WEV 170
W++
Sbjct: 549 WDI 551
Score = 137 (53.3 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 41/118 (34%), Positives = 63/118 (53%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH+G V ++++P G ++S GED+ ++LW S G F K + GH TI ++S
Sbjct: 478 GHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLAS-GGLF--KDLR--GHTDTISSLSFSQ 532
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSK----NGQFLATCS 160
+ +ASAS D T VWD R+ +A +G +E + T S N QF+A C+
Sbjct: 533 DSSLVASASMDNTVRVWDIRNAHG--SAPTDGCSSELIGQYTGSTSNILNVQFMA-CN 587
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 262 (97.3 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 81/273 (29%), Positives = 133/273 (48%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T + H+ V VS+ ++S + N+++W + G+ + +L +GH + +
Sbjct: 384 TFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRT-GS---LQNVL-EGHDDCVNSVS 438
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+SP +ASAS D T +W +G + TLEGH + V+SV +S + + +A+ S D +
Sbjct: 439 FSPDSRLLASASDDRTVKIWHAATGSLQ--RTLEGHNDWVRSVVFSHDSRLIASASDDMT 496
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W+ + +H V+ V F +LASAS D TVK++ D A N
Sbjct: 497 VKIWDTAT---VPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIW--DTATGSLEN 551
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 284
TL+ H V S++F LA+ SDD TVKIW Y A T + T
Sbjct: 552 --TLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW--Y-----AATGTVQH--------T 594
Query: 285 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 317
G GR +++ H ++L+A+A D ++I+
Sbjct: 595 FDGS-GRVAISLAFSHTSNLLASAMDDGTVKIW 626
Score = 252 (93.8 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 103/389 (26%), Positives = 167/389 (42%)
Query: 2 SSIFDLETLLDNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQ 61
SS DL ++++ Y + + + L + + + + KGH V +VS++
Sbjct: 217 SSDIDLLDVVEDSYRF--ALWNISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHD 274
Query: 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121
+++S D +++W + F + +GH ++ +S +ASAS D T
Sbjct: 275 SRLLASASGDGTVKIWDTAT---SFLQNTL--EGHNEWVKSVVFSHDSRLLASASDDGTV 329
Query: 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV 181
+WD +G + L+GH + V+SV +S + + +A+ S D++V +WE
Sbjct: 330 KIWDTATGTLQ--RMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTG---LLRHT 384
Query: 182 INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 241
H V V F LASAS VK++ D N L+ H V S++F
Sbjct: 385 FEDHEDSVMAVSFAHDSRRLASASDGGNVKIW--DTRTGSLQN--VLEGHDDCVNSVSFS 440
Query: 242 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS---- 297
LA+ SDD TVKIW G+ ND V V + H R I S
Sbjct: 441 PDSRLLASASDDRTVKIWHA-ATGSLQRTLEGHNDWVRSVVFS---HDSRLIASASDDMT 496
Query: 298 ---WCHLTDLIAT--ACGDDAIR--IFKENPE--AGDSDMVSFDLVHT-----EH--RAH 341
W T + D+ +R +F + A SD ++ + T E+ H
Sbjct: 497 VKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGH 556
Query: 342 NQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
+ VN V+++P +LAS SDDG VK+W
Sbjct: 557 DDRVNSVSFSPD-SRLLASASDDGTVKIW 584
Score = 211 (79.3 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 87/306 (28%), Positives = 137/306 (44%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH R + ++S +ASAS D T +WD + F N TLEGH VKSV +S + +
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATS-FLQN-TLEGHNEWVKSVVFSHDSR 318
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
LA+ S D +V +W+ ++ H V+ V F ++AS S D TV++++
Sbjct: 319 LLASASDDGTVKIWDTATGT---LQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWE 375
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274
+ T + H +V +++F RLA+ SD VKIW + + G+ +
Sbjct: 376 TTTG----LLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIW-DTRTGSLQNVLEGH 430
Query: 275 NDSVWKCVCTLS-GHHGRTIYDIS-------WCHLT-DLIATACG-DDAIR--IFKENPE 322
+D CV ++S R + S W T L T G +D +R +F +
Sbjct: 431 DD----CVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSR 486
Query: 323 --AGDSDMVSFDLVHTEH-------RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI- 372
A SD ++ + T +H+ V V ++ +LAS SDD VK+W
Sbjct: 487 LIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHD-SRLLASASDDMTVKIWDTA 545
Query: 373 --KLEN 376
LEN
Sbjct: 546 TGSLEN 551
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 49/170 (28%), Positives = 84/170 (49%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL+GH V +V ++ +I+S +D +++W + + ++ H +R
Sbjct: 467 RTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLES-----HDNWVRSV 521
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+S +ASAS D T +WD +G E N TLEGH++ V SV++S + + LA+ S D
Sbjct: 522 VFSHDSRLLASASDDMTVKIWDTATGSLE-N-TLEGHDDRVNSVSFSPDSRLLASASDDG 579
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
+V +W + + + F N+LASA D TVK++
Sbjct: 580 TVKIWYAATGTVQH---TFDGSGRVAISLAFSHTSNLLASAMDDGTVKIW 626
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 258 (95.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 70/241 (29%), Positives = 119/241 (49%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N++ L GH G V+ VS++P + SC EDK +RLW +++ TA + GH + +
Sbjct: 509 NTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTY----TA-LVSYKGHTQPVW 563
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ +SP G++ +AS D T +W + GH N+V V + N ++ T S
Sbjct: 564 DVKFSPLGHYFVTASHDQTARLW--ATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSS 621
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 221
DK+ +W+V + C V H V + P LAS D + ++
Sbjct: 622 DKTCRMWDVHTGN---CVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGR-- 676
Query: 222 WINFATLKSHT-STVWSLAFDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPD--NDS 277
+++ H ++++SLAF R G+ L + C+D++ V++W K N AG P P+ N++
Sbjct: 677 --RLKSMRGHARASLYSLAFSRDGTVLVSGCADNS-VRVWDVKKNTNDAG-PEPEAFNNN 732
Query: 278 V 278
V
Sbjct: 733 V 733
Score = 176 (67.0 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 62/281 (22%), Positives = 119/281 (42%)
Query: 56 VSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD---------GHQRTIRETAWS 106
+ +N T++++ +D I+LW + K K GH + ++S
Sbjct: 467 IEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFS 526
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
P ++ S S D T +W + + + +GH V V +S G + T S D++
Sbjct: 527 PDNKYLLSCSEDKTVRLWSLDT--YTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTAR 584
Query: 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA 226
+W D + HI DV V FHP N + + S D T +++ D + +
Sbjct: 585 LWAT---DHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMW--DVHTGNCVR-- 637
Query: 227 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 286
HT++V LA G LA+ +D + +W G+ + + +
Sbjct: 638 VFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDI---GSGRRLKS------------MR 682
Query: 287 GHHGRTIYDISWCHLTDLIATACGDDAIRIF--KENP-EAG 324
GH ++Y +++ ++ + C D+++R++ K+N +AG
Sbjct: 683 GHARASLYSLAFSRDGTVLVSGCADNSVRVWDVKKNTNDAG 723
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 253 (94.1 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 69/217 (31%), Positives = 107/217 (49%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
QT +GH R+ V+++P G + + DK RLW + G A+ +L +GH R++
Sbjct: 333 QTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINT-G----AELLLQEGHSRSVYGI 387
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A+ G AS D+ VWD R+G+ +GH V SV +S NG LA+ D
Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTGR--SILVFQGHIKPVFSVNFSPNGYHLASGGEDN 445
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADW 222
+W++ + +I AH V +V++ P + LA+ASYD V ++ + D+
Sbjct: 446 QCRIWDLRMR---KSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW----SGRDF 498
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+L H S V SL S +AT S D T+K+W
Sbjct: 499 SLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 200 (75.5 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 70/282 (24%), Positives = 127/282 (45%)
Query: 21 IPSTENLTGTNLILCSRCEMINS-QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGK 79
I +T +L+G L ++ N+ LK H+ R +V ++P +++ D+ +LW
Sbjct: 269 ILATCSLSGVTK-LWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKT 327
Query: 80 ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG 139
+ G +GH + A+ P G ++ + S+D T +WD +G E EG
Sbjct: 328 D--GTLLQT----FEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGA-EL-LLQEG 379
Query: 140 HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199
H V + + ++G A+C D VW++ V HI+ V V F P
Sbjct: 380 HSRSVYGIAFQQDGALAASCGLDSLARVWDLRTG---RSILVFQGHIKPVFSVNFSPNGY 436
Query: 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKI 258
LAS D+ +++ ++ +I + +H + V + ++ + G LAT S D V I
Sbjct: 437 HLASGGEDNQCRIWDLRMRKSLYI----IPAHANLVSQVKYEPQEGYFLATASYDMKVNI 492
Query: 259 W--KEYK-----PGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 293
W +++ G+ + + + D + C+ T+S H RTI
Sbjct: 493 WSGRDFSLVKSLAGHESKVASLDITADSSCIATVS--HDRTI 532
Score = 164 (62.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 48/210 (22%), Positives = 94/210 (44%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
G R + ++S G +A+ S T +W+ A L+ H+ V +S
Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVT-NTIAVLKDHKERATDVVFSPVDD 311
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
LAT S D++ +W+ + H+ + +V FHP L + SYD T +L+
Sbjct: 312 CLATASADRTAKLWKT----DGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLW- 366
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274
+ A+ + + H+ +V+ +AF + G+ A+C D+ ++W + + G S +
Sbjct: 367 DINTGAELL---LQEGHSRSVYGIAFQQDGALAASCGLDSLARVW-DLRTGRSILVFQGH 422
Query: 275 NDSVWKCVCTLSGHHGRTIYDISWCHLTDL 304
V+ + +G+H + + + C + DL
Sbjct: 423 IKPVFSVNFSPNGYHLASGGEDNQCRIWDL 452
Score = 161 (61.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 39/133 (29%), Positives = 69/133 (51%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
+GH V++V+++P G ++S GED R+W + + A H + + +
Sbjct: 420 QGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPA-----HANLVSQVKYE 474
Query: 107 PC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
P G F+A+AS+D +W R F +L GHE++V S+ + + +AT S D+++
Sbjct: 475 PQEGYFLATASYDMKVNIWSGRD--FSLVKSLAGHESKVASLDITADSSCIATVSHDRTI 532
Query: 166 WVW-EVGEEDEYE 177
+W G +DE E
Sbjct: 533 KLWTSSGNDDEDE 545
Score = 142 (55.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 43/143 (30%), Positives = 66/143 (46%)
Query: 118 DATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 176
DA T W K + + + G + + ++S++G+ LATCS +WE+ +
Sbjct: 232 DAETK-WALKHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTN- 289
Query: 177 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 236
AV+ H + V F P D+ LA+AS D T KL+K D T + H +
Sbjct: 290 -TIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQ-----TFEGHLDRLA 343
Query: 237 SLAFDRIGSRLATCSDDATVKIW 259
+AF G L T S D T ++W
Sbjct: 344 RVAFHPSGKYLGTTSYDKTWRLW 366
Score = 40 (19.1 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
AH V+ V + P LA+ S D V +W
Sbjct: 463 AHANLVSQVKYEPQEGYFLATASYDMKVNIW 493
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 70/236 (29%), Positives = 114/236 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SAS D T +W+ ++G C T GH V+ V +++G +A+CS D+
Sbjct: 199 AIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI--LASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P + ++ A+ +T K K
Sbjct: 257 TVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313
Query: 215 --EDKAEADW-----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
DK W + TL H + V + F G + +C+DD T+++W +YK
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-DYK 368
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 88/335 (26%), Positives = 153/335 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++++ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISF 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + SRDK++
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+WEV + Y C H + V+ VR + ++AS S D TV+++ E
Sbjct: 217 KMWEV--QTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK---- 269
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK---- 280
A L+ H V +++ S ++ S+ + K KPG + D +W
Sbjct: 270 AELREHEHVVECISWAPESS-YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328
Query: 281 -CVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH + + + H +C DD +R++ D + + T +
Sbjct: 329 MCLMTLVGHDN-WVRGVLF-HSGGKFILSCADDKTLRVW---------DYKNKRCMKTLN 377
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH V + ++ P ++ S D VK+W+ +
Sbjct: 378 -AHEHFVTSLDFHKTAPYVVTG-SVDQTVKVWECR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 70/236 (29%), Positives = 114/236 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SAS D T +W+ ++G C T GH V+ V +++G +A+CS D+
Sbjct: 199 AIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI--LASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P + ++ A+ +T K K
Sbjct: 257 TVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313
Query: 215 --EDKAEADW-----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
DK W + TL H + V + F G + +C+DD T+++W +YK
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-DYK 368
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 88/335 (26%), Positives = 153/335 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++++ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISF 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + SRDK++
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+WEV + Y C H + V+ VR + ++AS S D TV+++ E
Sbjct: 217 KMWEV--QTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK---- 269
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK---- 280
A L+ H V +++ S ++ S+ + K KPG + D +W
Sbjct: 270 AELREHEHVVECISWAPESS-YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328
Query: 281 -CVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH + + + H +C DD +R++ D + + T +
Sbjct: 329 MCLMTLVGHDN-WVRGVLF-HSGGKFILSCADDKTLRVW---------DYKNKRCMKTLN 377
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH V + ++ P ++ S D VK+W+ +
Sbjct: 378 -AHEHFVTSLDFHKTAPYVVTG-SVDQTVKVWECR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 70/236 (29%), Positives = 114/236 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SAS D T +W+ ++G C T GH V+ V +++G +A+CS D+
Sbjct: 199 AIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI--LASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P + ++ A+ +T K K
Sbjct: 257 TVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313
Query: 215 --EDKAEADW-----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
DK W + TL H + V + F G + +C+DD T+++W +YK
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-DYK 368
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 88/335 (26%), Positives = 153/335 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++++ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISF 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + SRDK++
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+WEV + Y C H + V+ VR + ++AS S D TV+++ E
Sbjct: 217 KMWEV--QTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK---- 269
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK---- 280
A L+ H V +++ S ++ S+ + K KPG + D +W
Sbjct: 270 AELREHEHVVECISWAPESS-YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328
Query: 281 -CVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH + + + H +C DD +R++ D + + T +
Sbjct: 329 MCLMTLVGHDN-WVRGVLF-HSGGKFILSCADDKTLRVW---------DYKNKRCMKTLN 377
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH V + ++ P ++ S D VK+W+ +
Sbjct: 378 -AHEHFVTSLDFHKTAPYVVTG-SVDQTVKVWECR 410
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 70/236 (29%), Positives = 114/236 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SAS D T +W+ ++G C T GH V+ V +++G +A+CS D+
Sbjct: 199 AIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI--LASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P + ++ A+ +T K K
Sbjct: 257 TVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313
Query: 215 --EDKAEADW-----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
DK W + TL H + V + F G + +C+DD T+++W +YK
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-DYK 368
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 88/335 (26%), Positives = 153/335 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++++ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISF 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + SRDK++
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+WEV + Y C H + V+ VR + ++AS S D TV+++ E
Sbjct: 217 KMWEV--QTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK---- 269
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK---- 280
A L+ H V +++ S ++ S+ + K KPG + D +W
Sbjct: 270 AELREHEHVVECISWAPESS-YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328
Query: 281 -CVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH + + + H +C DD +R++ D + + T +
Sbjct: 329 MCLMTLVGHDN-WVRGVLF-HSGGKFILSCADDKTLRVW---------DYKNKRCMKTLN 377
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH V + ++ P ++ S D VK+W+ +
Sbjct: 378 -AHEHFVTSLDFHKTAPYVVTG-SVDQTVKVWECR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 70/236 (29%), Positives = 114/236 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SAS D T +W+ ++G C T GH V+ V +++G +A+CS D+
Sbjct: 199 AIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI--LASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P + ++ A+ +T K K
Sbjct: 257 TVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313
Query: 215 --EDKAEADW-----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
DK W + TL H + V + F G + +C+DD T+++W +YK
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-DYK 368
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 88/335 (26%), Positives = 153/335 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++++ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISF 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + SRDK++
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+WEV + Y C H + V+ VR + ++AS S D TV+++ E
Sbjct: 217 KMWEV--QTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK---- 269
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK---- 280
A L+ H V +++ S ++ S+ + K KPG + D +W
Sbjct: 270 AELREHEHVVECISWAPESS-YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328
Query: 281 -CVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH + + + H +C DD +R++ D + + T +
Sbjct: 329 MCLMTLVGHDN-WVRGVLF-HSGGKFILSCADDKTLRVW---------DYKNKRCMKTLN 377
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH V + ++ P ++ S D VK+W+ +
Sbjct: 378 -AHEHFVTSLDFHKTAPYVVTG-SVDQTVKVWECR 410
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 70/236 (29%), Positives = 114/236 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SAS D T +W+ ++G C T GH V+ V +++G +A+CS D+
Sbjct: 199 AIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI--LASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P + ++ A+ +T K K
Sbjct: 257 TVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313
Query: 215 --EDKAEADW-----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
DK W + TL H + V + F G + +C+DD T+++W +YK
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-DYK 368
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 88/335 (26%), Positives = 153/335 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++++ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISF 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + SRDK++
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+WEV + Y C H + V+ VR + ++AS S D TV+++ E
Sbjct: 217 KMWEV--QTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK---- 269
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK---- 280
A L+ H V +++ S ++ S+ + K KPG + D +W
Sbjct: 270 AELREHEHVVECISWAPESS-YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328
Query: 281 -CVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH + + + H +C DD +R++ D + + T +
Sbjct: 329 MCLMTLVGHDN-WVRGVLF-HSGGKFILSCADDKTLRVW---------DYKNKRCMKTLN 377
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH V + ++ P ++ S D VK+W+ +
Sbjct: 378 -AHEHFVTSLDFHKTAPYVVTG-SVDQTVKVWECR 410
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 70/236 (29%), Positives = 114/236 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SAS D T +W+ ++G C T GH V+ V +++G +A+CS D+
Sbjct: 199 AIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI--LASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P + ++ A+ +T K K
Sbjct: 257 TVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313
Query: 215 --EDKAEADW-----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
DK W + TL H + V + F G + +C+DD T+++W +YK
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-DYK 368
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 88/335 (26%), Positives = 153/335 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++++ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISF 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + SRDK++
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+WEV + Y C H + V+ VR + ++AS S D TV+++ E
Sbjct: 217 KMWEV--QTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK---- 269
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK---- 280
A L+ H V +++ S ++ S+ + K KPG + D +W
Sbjct: 270 AELREHEHVVECISWAPESS-YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328
Query: 281 -CVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH + + + H +C DD +R++ D + + T +
Sbjct: 329 MCLMTLVGHDN-WVRGVLF-HSGGKFILSCADDKTLRVW---------DYKNKRCMKTLN 377
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH V + ++ P ++ S D VK+W+ +
Sbjct: 378 -AHEHFVTSLDFHKTAPYVVTG-SVDQTVKVWECR 410
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 70/236 (29%), Positives = 114/236 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SAS D T +W+ ++G C T GH V+ V +++G +A+CS D+
Sbjct: 199 AIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI--LASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P + ++ A+ +T K K
Sbjct: 257 TVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313
Query: 215 --EDKAEADW-----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
DK W + TL H + V + F G + +C+DD T+++W +YK
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-DYK 368
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 88/335 (26%), Positives = 153/335 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++++ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISF 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + SRDK++
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+WEV + Y C H + V+ VR + ++AS S D TV+++ E
Sbjct: 217 KMWEV--QTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK---- 269
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK---- 280
A L+ H V +++ S ++ S+ + K KPG + D +W
Sbjct: 270 AELREHEHVVECISWAPESS-YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328
Query: 281 -CVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH + + + H +C DD +R++ D + + T +
Sbjct: 329 MCLMTLVGHDN-WVRGVLF-HSGGKFILSCADDKTLRVW---------DYKNKRCMKTLN 377
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH V + ++ P ++ S D VK+W+ +
Sbjct: 378 -AHEHFVTSLDFHKTAPYVVTG-SVDQTVKVWECR 410
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 249 (92.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 75/236 (31%), Positives = 114/236 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
++LKGH V +V+++ QG +++SC D +I+LW F + + GH +
Sbjct: 144 RSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLW---DFQQSYECIKTMH-GHDHNVSSV 199
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A+ P G+++ SAS D T +W+ +G C T GH V+ V G ATCS D+
Sbjct: 200 AFVPAGDYVLSASRDRTIKMWEVATGY--CVKTYTGHREWVRMVRVHIEGSIFATCSNDQ 257
Query: 164 SVWVWEVGEED--------EY--EC--------AAVIN-AHIQDVKKVRFH-PFDNILAS 203
++ VW +D E+ EC A+ IN A D KK PF LAS
Sbjct: 258 TIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPF---LAS 314
Query: 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
S D T++++ D + + TL H + V LAF G L + SDD T+++W
Sbjct: 315 GSRDKTIRIW--DVSVG--LCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Score = 240 (89.5 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 81/335 (24%), Positives = 154/335 (45%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
+L GH+ + V ++P ++ S ED IR+W E+ + + K GH ++++ A
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLK-----GHTDSVQDVA 157
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+ G +AS S D + +WD + +EC T+ GH++ V SV + G ++ + SRD++
Sbjct: 158 FDAQGKLLASCSADLSIKLWDFQQS-YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRT 216
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+ +WEV Y C H + V+ VR H +I A+ S D T++++ + +
Sbjct: 217 IKMWEVATG--Y-CVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCK--- 270
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK--- 280
L+ H TV +A+ + A ++ A K + G + D +W
Sbjct: 271 -VELRDHEHTVECIAWAPEAAASAI-NEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSV 328
Query: 281 --CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TLSGH + +++ + +A D IR++ D+ + + T +
Sbjct: 329 GLCLLTLSGHDN-WVRGLAFHPGGKYLVSASDDKTIRVW---------DLRNKRCMKTLY 378
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH + ++ P +++ S D VK+W+ +
Sbjct: 379 -AHQHFCTSIDFHKAHPYVISG-SVDQTVKVWECR 411
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 64/251 (25%), Positives = 103/251 (41%)
Query: 136 TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195
+L GH + V + + + S D ++ +W+ E EYE + + H V+ V F
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDF-ETGEYERS--LKGHTDSVQDVAFD 159
Query: 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255
+LAS S D ++KL+ + + + I T+ H V S+AF G + + S D T
Sbjct: 160 AQGKLLASCSADLSIKLW-DFQQSYECIK--TMHGHDHNVSSVAFVPAGDYVLSASRDRT 216
Query: 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAI 314
+K+W E G CV T +GH R + H+ + AT D I
Sbjct: 217 IKMW-EVATGY--------------CVKTYTGH--REWVRMVRVHIEGSIFATCSNDQTI 259
Query: 315 RIFKENPEAGDSDMVSFDLVHTEH------RAHNQDVNCVAWNPVVPG-----MLASCSD 363
R++ N + D + D HT A +N A G LAS S
Sbjct: 260 RVWLTNSK--DCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSR 317
Query: 364 DGDVKLWQIKL 374
D +++W + +
Sbjct: 318 DKTIRIWDVSV 328
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 248 (92.4 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 70/236 (29%), Positives = 114/236 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 144 RTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SAS D T +W+ ++G C T GH V+ V +++G +A+CS D+
Sbjct: 199 AIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI--LASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P + ++ A+ +T K K
Sbjct: 257 TVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313
Query: 215 --EDKAEADW-----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
DK W + TL H + V + F G + +C+DD T+++W +YK
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-DYK 368
Score = 248 (92.4 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 88/335 (26%), Positives = 152/335 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++ + ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVEDISF 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + SRDK++
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+WEV + Y C H + V+ VR + ++AS S D TV+++ E
Sbjct: 217 KMWEV--QTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK---- 269
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK---- 280
A L+ H V +++ S ++ S+ + K KPG + D +W
Sbjct: 270 AELREHEHVVECISWAPESS-YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328
Query: 281 -CVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH + + + H +C DD +R++ D + + T +
Sbjct: 329 MCLMTLVGHDN-WVRGVLF-HSGGKFILSCADDKTLRVW---------DYKNKRCMKTLN 377
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH V + ++ P ++ S D VK+W+ +
Sbjct: 378 -AHEHFVTSLDFHKTAPYVVTG-SVDQTVKVWECR 410
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 248 (92.4 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 65/243 (26%), Positives = 111/243 (45%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T +GH + +S+NPQ T++++ D +LW +S FT GH I +
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLT-----GHSAEIISLS 226
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
++ GN I + SFD T VW+ +G+ TL GH E+ S ++ + + T S DK+
Sbjct: 227 FNTSGNRIITGSFDHTVTVWEADTGRKVY--TLIGHCAEISSAVFNWDCSLILTGSMDKT 284
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+W+ +C A + H ++ F ++A+AS D T ++F E
Sbjct: 285 CKLWDAVNG---KCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATREC---- 337
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 284
L+ H + ++F+ G+RL T S D T +IW + + G + D ++ C
Sbjct: 338 VTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIW-DAQTGQCLQVLEGHTDEIFSCAFN 396
Query: 285 LSG 287
G
Sbjct: 397 YKG 399
Score = 231 (86.4 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 58/216 (26%), Positives = 102/216 (47%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH + ++S+N G I + D + +W ++ G K ++ GH I
Sbjct: 214 TLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADT-GRK--VYTLI--GHCAEISSAV 268
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
++ + I + S D T +WD +G+ C ATL GH++E+ + G+ +AT S D +
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDAVNGK--CVATLTGHDDEILDSCFDYTGKLIATASADGT 326
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
++ EC + H ++ K+ F+P N L + S D T +++ +
Sbjct: 327 ARIFSAATR---ECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQC---- 379
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
L+ HT ++S AF+ G + T S D T +IW+
Sbjct: 380 LQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 200 (75.5 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 58/236 (24%), Positives = 106/236 (44%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+ L+ H + NV+ N G+ + D+ +LW S T +GH+ +
Sbjct: 86 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTL-----EGHRNVVYAI 140
Query: 104 AWS-PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
A++ P G+ IA+ SFD T +W +G+ C T GH E+ ++++ +AT S D
Sbjct: 141 AFNNPYGDKIATGSFDKTCKLWSVETGK--CYHTFRGHTAEIVCLSFNPQSTLVATGSMD 198
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+ +W++ +E + H ++ + F+ N + + S+D TV +++ D +
Sbjct: 199 TTAKLWDIQSGEE---VFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVY 255
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278
TL H + + S F+ S + T S D T K+W G T +D +
Sbjct: 256 ----TLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVN-GKCVATLTGHDDEI 306
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 231 (86.4 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 60/212 (28%), Positives = 107/212 (50%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC 108
H G V +++P G + + +D + +WG +S G A GH+ ++ +SP
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKS-GRLLWRLA----GHRGPVKSCCFSPD 79
Query: 109 GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168
G IAS+S D + +WD + +C L+GH+ V++V++S + + LA+ DK VW
Sbjct: 80 GRLIASSSSDHSIRLWDV--ARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVW 137
Query: 169 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL 228
EV ++ H ++ F P + LA+ S+D TV ++ + +A +++ L
Sbjct: 138 EVQSGRRVH---LLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIW-DLRASTPVVSYHNL 193
Query: 229 KSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
+ HT + L + G LA+ S D T+ +WK
Sbjct: 194 EGHTGNISCLCYSASGL-LASGSWDKTICVWK 224
Score = 220 (82.5 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 63/214 (29%), Positives = 102/214 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+G V + ++P G +I+S D +IRLW + +L GHQR++ ++
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVA----RSKCLHVLK-GHQRSVETVSF 118
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
SP +AS +D VW+ +SG+ L GH + ++S +S LAT S D +V
Sbjct: 119 SPDSKQLASGGWDKRAIVWEVQSGRRV--HLLVGHCDSIQSSDFSPTSDSLATGSWDSTV 176
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+W++ + H ++ + + +LAS S+D T+ ++K
Sbjct: 177 HIWDLRASTPVVSYHNLEGHTGNISCLCYSA-SGLLASGSWDKTICVWKPTTNNLP---- 231
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
LK HT V SLAF +LA+ TVK+W
Sbjct: 232 LQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVW 265
Score = 110 (43.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 38/139 (27%), Positives = 64/139 (46%)
Query: 140 HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199
H EV +S +G+ L T S D V+VW G + + H VK F P
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVW--GTKSG-RLLWRLAGHRGPVKSCCFSPDGR 81
Query: 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
++AS+S D +++L+ D A + ++ LK H +V +++F +LA+ D +W
Sbjct: 82 LIASSSSDHSIRLW--DVARSKCLH--VLKGHQRSVETVSFSPDSKQLASGGWDKRAIVW 137
Query: 260 KEYKPGNSAGIPTPDNDSV 278
E + G + DS+
Sbjct: 138 -EVQSGRRVHLLVGHCDSI 155
Score = 57 (25.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 21/89 (23%), Positives = 40/89 (44%)
Query: 289 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 348
H +I + +D +AT D + I+ + +VS+ H H +++C+
Sbjct: 151 HCDSIQSSDFSPTSDSLATGSWDSTVHIWDLR---ASTPVVSY---HNLE-GHTGNISCL 203
Query: 349 AWNPVVPGMLASCSDDGDVKLWQIKLENL 377
++ G+LAS S D + +W+ NL
Sbjct: 204 CYS--ASGLLASGSWDKTICVWKPTTNNL 230
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 247 (92.0 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 70/230 (30%), Positives = 117/230 (50%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P ++I S ED I++W E+ + T K GH ++++ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLK-----GHTDSVQDISF 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + SRDK++
Sbjct: 159 DHTGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF----KEDKAE-- 219
+WEV Y C H + V+ VR + ++AS+S D TV+++ KE KAE
Sbjct: 217 KMWEVATG--Y-CVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELR 273
Query: 220 -----ADWINFATLKSHTSTVWSLAFD-----RIGSRLATCSDDATVKIW 259
+ I++A +H + + + + + G L + S D T+K+W
Sbjct: 274 EHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Score = 232 (86.7 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 82/293 (27%), Positives = 131/293 (44%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH+ + + P + I SAS DAT VWD +G FE TL+GH + V+ +++ G+
Sbjct: 106 GHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFE--RTLKGHTDSVQDISFDHTGK 163
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
LA+CS D ++ +W+ +EC ++ H +V V P + + SAS D T+K+++
Sbjct: 164 LLASCSADMTIKLWDF---QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274
A T H V + ++ G+ +A+ S+D TV++W + T +
Sbjct: 221 V----ATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWV---------VATKE 267
Query: 275 NDSVWKCVCTLSGHHGRTIYDISWC----HLTDLIATACGDDAIRIFKENPE--AGDSDM 328
C L H + ISW H T L AT G + + K P +G D
Sbjct: 268 ------CKAELREHE-HVVECISWAPESAHPTILEAT--GSETKKSGKPGPFLLSGSRDK 318
Query: 329 ------VSFDLVHTEHRAHNQDVNCVAWNPVVPG--MLASCSDDGDVKLWQIK 373
VS + H+ V V V PG + SC+DD +++W K
Sbjct: 319 TIKMWDVSIGMCLMTLVGHDNWVRGVL---VHPGGKYIVSCADDKTLRIWDYK 368
Score = 227 (85.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 82/293 (27%), Positives = 130/293 (44%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SAS D T +W+ +G C T GH V+ V +++G +A+ S D+
Sbjct: 199 AIMPNGDHIVSASRDKTIKMWEVATGY--CVKTFTGHREWVRMVRPNQDGTLIASSSNDQ 256
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN--ILASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P + A+ +T K K
Sbjct: 257 TVRVWVVATK---ECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLS 313
Query: 215 --EDKAEADW-INFA----TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 267
DK W ++ TL H + V + G + +C+DD T++IW +YK N
Sbjct: 314 GSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIW-DYK--NK 370
Query: 268 AGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLT-DLIATACGDDAIRIFK 318
+C TLS H H T D H T + T D +++++
Sbjct: 371 ------------RCTKTLSAHEHFVTSLDF---HKTAPYVVTGSVDQTVKVWE 408
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 60/247 (24%), Positives = 97/247 (39%)
Query: 137 LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196
L GH + V V + + + S D ++ VW+ E ++E + H V+ + F
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWD-HETGDFE--RTLKGHTDSVQDISFDH 160
Query: 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
+LAS S D T+KL+ E T+ H V S+A G + + S D T+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFEC----IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 316
K+W E G CV T +GH + + LIA++ D +R+
Sbjct: 217 KMW-EVATGY--------------CVKTFTGHR-EWVRMVRPNQDGTLIASSSNDQTVRV 260
Query: 317 F----KE-NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV---PG-MLASCSDDGDV 367
+ KE E + + V + AH + PG L S S D +
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 368 KLWQIKL 374
K+W + +
Sbjct: 321 KMWDVSI 327
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 253 (94.1 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 66/217 (30%), Positives = 102/217 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S+ L GH G V+ VS++P + S ED IRLW ++F K GH + +
Sbjct: 492 SKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYK-----GHNYPVWD 546
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
T +SP G + S D +W + ++ GH +V + N ++AT S D
Sbjct: 547 TQFSPFGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSD 604
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
++V +W+V + C + H + + F P LAS S D V L+ D
Sbjct: 605 RTVRLWDVLNGN---CVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLW--DIGHG-- 657
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ A LK HT T+++L F R G +A+ S D TV++W
Sbjct: 658 LMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLW 694
Score = 217 (81.4 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 58/189 (30%), Positives = 89/189 (47%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH VW+ ++P G S G D+ RLW + + I + GH + T +
Sbjct: 538 KGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHY----QPLRIFA-GHLADVTCTRFH 592
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
P N++A+ S D T +WD +G C GH+ + S+ +S NG+FLA+ S D V
Sbjct: 593 PNSNYVATGSSDRTVRLWDVLNGN--CVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVL 650
Query: 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE----DKAEADW 222
+W++G A + H + ++F I+AS S D+TV+L+ D E D
Sbjct: 651 LWDIGHG---LMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMRAIDDVETDD 707
Query: 223 INFATLKSH 231
AT H
Sbjct: 708 FTAATGHIH 716
Score = 198 (74.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 61/215 (28%), Positives = 96/215 (44%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKES-------FGNKFTAKAILSDGHQRTIRETA 104
RVW+V+ P+ D N L KES K ++++ + GH + +
Sbjct: 451 RVWSVT--PKKLRKVKSAADLN--LIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVS 506
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+SP N++ S+S D T +W ++ F C +GH V +S G + + D+
Sbjct: 507 FSPDRNYLLSSSEDGTIRLWSLQT--FTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRV 564
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+W D Y+ + H+ DV RFHP N +A+ S D TV+L+ D + +
Sbjct: 565 ARLWAT---DHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLW--DVLNGNCVR 619
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
T H + SLAF G LA+ S D V +W
Sbjct: 620 IFT--GHKGPIHSLAFSPNGKFLASGSTDGRVLLW 652
Score = 156 (60.0 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 44/146 (30%), Positives = 73/146 (50%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH V ++P +++ D+ +RLW + GN I + GH+ I A+SP
Sbjct: 581 GHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLN-GN---CVRIFT-GHKGPIHSLAFSP 635
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G F+AS S D +WD G A L+GH + ++ +S++G+ +A+ S D +V +
Sbjct: 636 NGKFLASGSTDGRVLLWDIGHGLMI--AELKGHTGTIYALKFSRDGEIIASGSIDNTVRL 693
Query: 168 WEVGEE-DEYEC----AAVINAHIQD 188
W+V D+ E AA + H+ D
Sbjct: 694 WDVMRAIDDVETDDFTAATGHIHLPD 719
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 246 (91.7 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 69/236 (29%), Positives = 114/236 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SA+ D T +W+ ++G C T GH V+ V +++G +A+CS D+
Sbjct: 199 AIMPNGDHIVSAARDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI--LASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P + ++ A+ +T K K
Sbjct: 257 TVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313
Query: 215 --EDKAEADW-----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
DK W + TL H + V + F G + +C+DD T+++W +YK
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-DYK 368
Score = 246 (91.7 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 87/335 (25%), Positives = 153/335 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++++ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISF 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + +RDK++
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTI 216
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+WEV + Y C H + V+ VR + ++AS S D TV+++ E
Sbjct: 217 KMWEV--QTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK---- 269
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK---- 280
A L+ H V +++ S ++ S+ + K KPG + D +W
Sbjct: 270 AELREHEHVVECISWAPESS-YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328
Query: 281 -CVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH + + + H +C DD +R++ D + + T +
Sbjct: 329 MCLMTLVGHDN-WVRGVLF-HSGGKFILSCADDKTLRVW---------DYKNKRCMKTLN 377
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
AH V + ++ P ++ S D VK+W+ +
Sbjct: 378 -AHEHFVTSLDFHKTAPYVVTG-SVDQTVKVWECR 410
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 245 (91.3 bits), Expect = 8.2e-19, P = 8.2e-19
Identities = 79/279 (28%), Positives = 129/279 (46%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++++ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLK-----GHTDSVQDISF 158
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +AS S D T +WD + FEC T+ GH++ V SV NG + + SRDK++
Sbjct: 159 DQTGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTM 216
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+WEV Y C H + V+ VR + +LAS S D TV+++ E
Sbjct: 217 KMWEVATG--Y-CVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECK---- 269
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SVWK---- 280
A L+ H V +++ + T S+ + K KPG + D +W
Sbjct: 270 AELREHEHVVECISWAPESAH-PTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTG 328
Query: 281 -CVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIF 317
C+ TL GH + + + H +C DD +RI+
Sbjct: 329 MCLMTLVGHDN-WVRGVLF-HPGGRFVVSCADDKTLRIW 365
Score = 241 (89.9 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 80/291 (27%), Positives = 132/291 (45%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V ++S++ G +++SC D I+LW + F T GH +
Sbjct: 144 RTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A P G+ I SAS D T +W+ +G C T GH V+ V +++G LA+CS D+
Sbjct: 199 AIMPNGDHIVSASRDKTMKMWEVATGY--CVKTFTGHREWVRMVRPNQDGTLLASCSNDQ 256
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN--ILASASYDDTVKLFK------- 214
+V VW V + EC A + H V+ + + P ++ A+ + K K
Sbjct: 257 TVRVWVVATK---ECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLS 313
Query: 215 --EDKAEADW-IN----FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 267
DK W I+ TL H + V + F G + +C+DD T++IW +YK N
Sbjct: 314 GSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIW-DYK--NK 370
Query: 268 AGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318
+C+ TLS H + + + + + T D +++++
Sbjct: 371 ------------RCMKTLSAHE-HFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 239 (89.2 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 79/291 (27%), Positives = 133/291 (45%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH+ + + P + + SAS DAT VWD +G FE TL+GH + V+ +++ + G+
Sbjct: 106 GHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFE--RTLKGHTDSVQDISFDQTGK 163
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
LA+CS D ++ +W+ +EC ++ H +V V P + + SAS D T+K+++
Sbjct: 164 LLASCSADMTIKLWDF---QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE 220
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274
A T H V + ++ G+ LA+CS+D TV++W + T +
Sbjct: 221 V----ATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWV---------VATKE 267
Query: 275 NDSVWKCVCTLSGHHGRTIYDISWC----HLTDLIATACGDDAIRIFKENPE--AGDSDM 328
C L H + ISW H T I+ A G + + K P +G D
Sbjct: 268 ------CKAELREHE-HVVECISWAPESAHPT--ISEATGSENKKSGKPGPFLLSGSRDK 318
Query: 329 ------VSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
+S + H+ V V ++P + SC+DD +++W K
Sbjct: 319 TIKMWDISTGMCLMTLVGHDNWVRGVLFHPG-GRFVVSCADDKTLRIWDYK 368
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 248 (92.4 bits), Expect = 8.2e-19, P = 8.2e-19
Identities = 71/226 (31%), Positives = 108/226 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK + H +
Sbjct: 259 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT-GE---AKQLFPF-HSAPALD 313
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W N AS S D V + GQ T +GH NEV ++ W G LA+CS D
Sbjct: 314 VDWQS-NNTFASCSTDMCIHVC--KLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 370
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD--------NI-LASASYDDTVKLF 213
++ +W + +++ C + AH +++ +++ P N+ LASAS+D TV+L+
Sbjct: 371 MTLKIWSMKQDN---CVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLW 427
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D+ I TL H V+S+AF G LA+ S D V IW
Sbjct: 428 DVDRG----ICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 220 (82.5 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 57/223 (25%), Positives = 102/223 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG----KESFGNKFTAKAILSDGHQ---- 97
L+GH+ V+ +WNP +++S D R+W S + + + +G Q
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 98 -RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ + W+ G +A+ S+D +W K G +TL H+ + ++ W+K G F+
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWTK-DGNLA--STLGQHKGPIFALKWNKKGNFI 281
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+ DK+ +W+ + + +A DV +N AS S D + + K
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVD----WQSNNTFASCSTDMCIHVCKLG 337
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ T + HT+ V ++ +D G+ LA+CSDD T+KIW
Sbjct: 338 QDRP----IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 68/298 (22%), Positives = 123/298 (41%)
Query: 89 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD----KRSGQFEC---NATLEGHE 141
KA++ GH+ + AW+P + +AS S D+T +W+ SG + + EG +
Sbjct: 161 KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQ 220
Query: 142 N-----EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196
+ +V S+ W+ G LAT S D +W + A+ + H + ++++
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT----KDGNLASTLGQHKGPIFALKWNK 276
Query: 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
N + SA D T ++ EA + H++ + + + A+CS D +
Sbjct: 277 KGNFILSAGVDKTTIIWDAHTGEAKQL----FPFHSAPALDVDWQS-NNTFASCSTDMCI 331
Query: 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIR 315
+ K G P + T GH + I W +L+A+ C DD ++
Sbjct: 332 HVCK-------LGQDRP--------IKTFQGHTNE-VNAIKWDPTGNLLAS-CSDDMTLK 374
Query: 316 IFKENPEAGDSDMVSFDL-VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
I+ + D+ + + ++T + NP MLAS S D V+LW +
Sbjct: 375 IWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTS---NPNANLMLASASFDSTVRLWDV 429
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 248 (92.4 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 68/249 (27%), Positives = 112/249 (44%)
Query: 12 DNQYLLPKTIPSTENLTG-TNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGE 70
D+++ P + N+T T + ++ + + + H+ V + +P + SC E
Sbjct: 323 DSEF--PVDMQPDPNVTSCTENVSAAKFDYKLNNIFRLHELPVSCIVMHPCRDYLISCSE 380
Query: 71 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130
D RLW + G + GH + + P G+ +A++S D+T +WD G
Sbjct: 381 D---RLW--KMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKG- 434
Query: 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190
EC TLEGH + V S TW G F+A+ S D + +W+V E C + H V
Sbjct: 435 -ECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSE---RCRYTLYGHTDSVN 490
Query: 191 KVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 250
+ F PF NIL +AS D T+ ++ + + +L H +V F G +A+C
Sbjct: 491 SIEFFPFSNILLTASADKTLSVWDARTGKCE----QSLYGHMHSVNDATFTPRGHIIASC 546
Query: 251 SDDATVKIW 259
K+W
Sbjct: 547 DARGVTKLW 555
Score = 220 (82.5 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 55/217 (25%), Positives = 96/217 (44%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH VW+ +W+ G ++S D ++W S ++T GH ++
Sbjct: 439 TLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLY-----GHTDSVNSIE 493
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+ P N + +AS D T +VWD R+G+ C +L GH + V T++ G +A+C
Sbjct: 494 FFPFSNILLTASADKTLSVWDARTGK--CEQSLYGHMHSVNDATFTPRGHIIASCDARGV 551
Query: 165 VWVWEVGEEDEYECAAVINAHI--QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+W D + +++ + +V F +LA AS + + L +
Sbjct: 552 TKLW-----DFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLDLKSGQIH- 605
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
L H S V S+ F +G L + D T+++W
Sbjct: 606 ----KLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 40 (19.1 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
H +V+ V ++ + + + SD G ++LW
Sbjct: 610 HESEVHSVVFSHLGENLYSGGSD-GTIRLW 638
Score = 37 (18.1 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 285 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 317
L GH ++ + + HL + + + D IR++
Sbjct: 607 LVGHESE-VHSVVFSHLGENLYSGGSDGTIRLW 638
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 249 (92.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 68/224 (30%), Positives = 113/224 (50%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH+G V+ V ++P G I+SCG+D+ IRLW N +K + H IR ++S
Sbjct: 87 GHKGAVYCVKYSPDGETIASCGQDRQIRLWQ-----NTVQSKCSIIKAHCGAIRSMSFSA 141
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G ++ S+S D T +W + +F C+ GH+N V+S S + + +A+ S DK+V +
Sbjct: 142 DGGYLLSSSDDKTLKLWRLQDKKFMCS--FAGHKNWVRSGVISPDMRLVASGSDDKTVML 199
Query: 168 WEVGEE---------DEYECAAVINA---HIQDVKKVRFHPFDNILASASYDDTVKLFKE 215
W++ + D+ + IN+ H+ V +V FHP L S+S+D +K+
Sbjct: 200 WDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKI--T 257
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D I +H + V S++ G LA+ D+ +KIW
Sbjct: 258 DIRSNKLIQH--YNAHDAQVNSISIHPTGYFLASAGSDSKIKIW 299
Score = 165 (63.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 55/229 (24%), Positives = 108/229 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S++ +GH+ + ++P+ ++SC +D + +W + F K + GH+ +
Sbjct: 40 SRSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPF--KFV---GHKGAVYC 94
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G IAS D +W + + Q +C+ ++ H ++S+++S +G +L + S D
Sbjct: 95 VKYSPDGETIASCGQDRQIRLW-QNTVQSKCSI-IKAHCGAIRSMSFSADGGYLLSSSDD 152
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK-------- 214
K++ +W + ++ ++ C+ H V+ P ++AS S D TV L+
Sbjct: 153 KTLKLWRL-QDKKFMCSFA--GHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVS 209
Query: 215 -----EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
+D + IN + H TV + F G+ L + S D +KI
Sbjct: 210 KYSTLDDNVKISQIN--SYSDHMDTVSQVLFHPDGTCLISSSFDHKIKI 256
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 58/238 (24%), Positives = 98/238 (41%)
Query: 36 SRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG 95
S+C +I K H G + ++S++ G + S +DK ++LW + KF G
Sbjct: 122 SKCSII-----KAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQD--KKFMCSFA---G 171
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWD-------KRSGQFECNATLE------GHEN 142
H+ +R SP +AS S D T +WD + + N + H +
Sbjct: 172 HKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMD 231
Query: 143 EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202
V V + +G L + S D + + ++ + NAH V + HP LA
Sbjct: 232 TVSQVLFHPDGTCLISSSFDHKIKITDIRSN---KLIQHYNAHDAQVNSISIHPTGYFLA 288
Query: 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
SA D +K++ D + I TL S+ + ++ F++ G AT +WK
Sbjct: 289 SAGSDSKIKIW--DLRQGRQIY--TLYSNDKDITTVQFNQSGDYFATGGSQNLCMVWK 342
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 50/215 (23%), Positives = 98/215 (45%)
Query: 136 TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195
+ GHE+ + + + +A+CS+D V+VW + H V V++
Sbjct: 42 SFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQR---PFKFVGHKGAVYCVKYS 98
Query: 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255
P +AS D ++L+ ++ ++ + +K+H + S++F G L + SDD T
Sbjct: 99 PDGETIASCGQDRQIRLW-QNTVQS---KCSIIKAHCGAIRSMSFSADGGYLLSSSDDKT 154
Query: 256 VKIW----KEYK---PGNS----AGIPTPDNDSVWKCVCTLSGHHGRTI--YDISWCHLT 302
+K+W K++ G+ +G+ +PD V SG +T+ +D+++ +
Sbjct: 155 LKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLV------ASGSDDKTVMLWDLNFQKIV 208
Query: 303 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337
+T DD ++I + N + D VS L H +
Sbjct: 209 SKYSTL--DDNVKISQINSYSDHMDTVSQVLFHPD 241
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 245 (91.3 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 69/216 (31%), Positives = 105/216 (48%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH+ + +V ++P G +++ D + LW A+A GH+ I +S
Sbjct: 15 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRP-----QARAFRYVGHKDVITSVQFS 69
Query: 107 PCGNFIASASFDATTAVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
P GN +ASAS D T +W DKR E A H V+SV +S +GQFLA+ S DKS
Sbjct: 70 PLGNLLASASRDRTIRLWIPDKRGKSSEFKA----HTAPVRSVDFSADGQFLASASEDKS 125
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+ VW + + + H V+ +F P ++ S S D T+K++ D +N
Sbjct: 126 IKVWNMYRQ---RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTNKQCVN 180
Query: 225 -FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
F+ + V AF+ G+ +A+ D TVKIW
Sbjct: 181 NFSDFVGFANFV---AFNPNGTCIASAGSDHTVKIW 213
Score = 217 (81.4 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 63/219 (28%), Positives = 99/219 (45%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIR 101
S K H V +V ++ G ++S EDK+I++W N + + + S H +R
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVW------NMYRQRFLYSLYRHTHWVR 148
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+SP G I S S D T +WD + Q C V ++ NG +A+
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQ--CVNNFSDFVGFANFVAFNPNGTCIASAGS 206
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 221
D +V +W++ + V H V V FHP N L +AS D T+K+ D E
Sbjct: 207 DHTVKIWDIRVNKLLQHYQV---HSGGVNCVSFHPSGNYLITASSDGTLKIL--DLLEGR 261
Query: 222 WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
I TL+ HT V++++F + G + DA V +W+
Sbjct: 262 LIY--TLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWR 298
Score = 173 (66.0 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 43/126 (34%), Positives = 68/126 (53%)
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
+GH+ + SV +S NG+ LAT S D + +W + + A H + V+F P
Sbjct: 15 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQAR---AFRYVGHKDVITSVQFSPL 71
Query: 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257
N+LASAS D T++L+ DK + K+HT+ V S+ F G LA+ S+D ++K
Sbjct: 72 GNLLASASRDRTIRLWIPDKRGKS----SEFKAHTAPVRSVDFSADGQFLASASEDKSIK 127
Query: 258 IWKEYK 263
+W Y+
Sbjct: 128 VWNMYR 133
Score = 127 (49.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD--GHQRTIRE 102
+L H V ++P G +I SC EDK I++W NK SD G +
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT---NKQCVNNF-SDFVGFANFV-- 192
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
A++P G IASA D T +WD R + + + H V V++ +G +L T S D
Sbjct: 193 -AFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQV--HSGGVNCVSFHPSGNYLITASSD 249
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
++ + ++ E + H V V F + S D V L++ + E ++
Sbjct: 250 GTLKILDLLEG---RLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRTNFDELNY 306
Score = 57 (25.1 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 341 HNQDVNCVAWNPVVPG-MLASCSDDGDVKLW 370
H V C ++P G ++ SCS+D +K+W
Sbjct: 143 HTHWVRCAKFSP--DGRLIVSCSEDKTIKIW 171
Score = 55 (24.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 346 NCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377
N VA+NP +AS D VK+W I++ L
Sbjct: 190 NFVAFNPNGT-CIASAGSDHTVKIWDIRVNKL 220
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 245 (91.3 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 69/216 (31%), Positives = 105/216 (48%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH+ + +V ++P G +++ D + LW K A+A GH+ + +S
Sbjct: 15 KGHKAAITSVDFSPSGKQLATASWDTFLMLWNC-----KPQARAFRYVGHKDVVTSVQFS 69
Query: 107 PCGNFIASASFDATTAVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
P GN +ASAS D T +W DKR E A H V+SV +S +GQFLAT S DKS
Sbjct: 70 PLGNLLASASRDRTVRLWIPDKRGKSSEFKA----HTAPVRSVDFSADGQFLATASEDKS 125
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+ VW + + + H V+ +F P ++ S S D T+K++ D +N
Sbjct: 126 IKVWNMYRQ---RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTNKQCVN 180
Query: 225 -FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
F+ + V F+ G+ +A+ D TVKIW
Sbjct: 181 NFSDSVGFANFV---DFNPNGTCIASAGSDHTVKIW 213
Score = 208 (78.3 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 60/219 (27%), Positives = 99/219 (45%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIR 101
S K H V +V ++ G +++ EDK+I++W N + + + S H +R
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW------NMYRQRFLYSLYRHTHWVR 148
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+SP G I S S D T +WD + Q C V ++ NG +A+
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQ--CVNNFSDSVGFANFVDFNPNGTCIASAGS 206
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 221
D +V +W++ + V H V V FHP N + +AS D T+K+ D E
Sbjct: 207 DHTVKIWDIRVNKLLQHYQV---HSGGVNCVSFHPSGNYIITASSDGTLKIL--DLLEGR 261
Query: 222 WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
I TL+ HT V++++F + G ++ D V +W+
Sbjct: 262 LIY--TLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWR 298
Score = 178 (67.7 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 73/252 (28%), Positives = 116/252 (46%)
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
+GH+ + SV +S +G+ LAT S D + +W + A H V V+F P
Sbjct: 15 KGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQAR---AFRYVGHKDVVTSVQFSPL 71
Query: 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257
N+LASAS D TV+L+ DK + K+HT+ V S+ F G LAT S+D ++K
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKS----SEFKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS---WCHLTDLIATACGD--- 311
+W Y+ + + + W C GR I S + D C +
Sbjct: 128 VWNMYR---QRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 312 DAIRI--FKE-NPE------AGDSDMVS-FDL-VHT--EH-RAHNQDVNCVAWNPVVPGM 357
D++ F + NP AG V +D+ V+ +H + H+ VNCV+++P
Sbjct: 184 DSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPS-GNY 242
Query: 358 LASCSDDGDVKL 369
+ + S DG +K+
Sbjct: 243 IITASSDGTLKI 254
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 46/182 (25%), Positives = 79/182 (43%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG--KESFGNKFTAKAILSDGHQRTIRE 102
+L H V ++P G +I SC EDK I++W + N F+ S G +
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD----SVGFANFVD- 193
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
++P G IASA D T +WD R + + + H V V++ +G ++ T S D
Sbjct: 194 --FNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQV--HSGGVNCVSFHPSGNYIITASSD 249
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
++ + ++ E + H V V F + +S D V L++ + D+
Sbjct: 250 GTLKILDLLEG---RLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTN---FDY 303
Query: 223 IN 224
+N
Sbjct: 304 LN 305
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 243 (90.6 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 61/244 (25%), Positives = 115/244 (47%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T +GH + +S+NPQ T++++ D +LW ++ +T + GH I +
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLR-----GHSAEIISLS 226
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
++ G+ I + SFD T VWD +G+ + N + GH E+ S +++ + + T S DK+
Sbjct: 227 FNTSGDRIITGSFDHTVVVWDADTGR-KVNILI-GHCAEISSASFNWDCSLILTGSMDKT 284
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+W+ +C A + H ++ F ++A+AS D T ++F +
Sbjct: 285 CKLWDATNG---KCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKC---- 337
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 284
A L+ H + ++F+ G+ L T S D T +IW + + G + D ++ C
Sbjct: 338 IAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIW-DAQTGQCLQVLEGHTDEIFSCAFN 396
Query: 285 LSGH 288
G+
Sbjct: 397 YKGN 400
Score = 237 (88.5 bits), Expect = 8.7e-18, P = 8.7e-18
Identities = 60/216 (27%), Positives = 106/216 (49%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH + ++S+N G I + D + +W ++ G K IL GH I +
Sbjct: 214 TLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADT-GRKVN---ILI-GHCAEISSAS 268
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
++ + I + S D T +WD +G+ C ATL GH++E+ + G+ +AT S D +
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDATNGK--CVATLTGHDDEILDSCFDYTGKLIATASADGT 326
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
++ +C A + H ++ K+ F+P N L + S D T +++ +
Sbjct: 327 ARIFSAATR---KCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQC---- 379
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
L+ HT ++S AF+ G+ + T S D T +IW+
Sbjct: 380 LQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIWR 415
Score = 220 (82.5 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 62/216 (28%), Positives = 106/216 (49%)
Query: 45 TLKGHQGRVWNVSWN-PQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
TL+GH+ V+ +++N P G I++ DK +LW E+ T + GH I
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFR-----GHTAEIVCL 183
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+++P +A+ S D T +WD ++G+ E TL GH E+ S++++ +G + T S D
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDIQNGE-EVY-TLRGHSAEIISLSFNTSGDRIITGSFDH 241
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
+V VW+ D ++ H ++ F+ +++ + S D T KL+ D +
Sbjct: 242 TVVVWDA---DTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLW--DATNGKCV 296
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
ATL H + FD G +AT S D T +I+
Sbjct: 297 --ATLTGHDDEILDSCFDYTGKLIATASADGTARIF 330
Score = 214 (80.4 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 76/293 (25%), Positives = 131/293 (44%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-GQ 154
H + A + G+ + S+D T +WD SG+ E N TLEGH N V ++ ++ G
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGE-ELN-TLEGHRNVVYAIAFNNPYGD 148
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
+AT S DK+ +W V + +C H ++ + F+P ++A+ S D T KL+
Sbjct: 149 KIATGSFDKTCKLWSV---ETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGI---P 271
E + TL+ H++ + SL+F+ G R+ T S D TV +W + G I
Sbjct: 206 IQNGEEVY----TLRGHSAEIISLSFNTSGDRIITGSFDHTVVVW-DADTGRKVNILIGH 260
Query: 272 TPDNDSV---WKCVCTLSGHHGRT--IYDIS--WCHLT-----DLIATACGDDAIRIFKE 319
+ S W C L+G +T ++D + C T D I +C D ++
Sbjct: 261 CAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIAT 320
Query: 320 NPEAGDSDMVSFDLVH--TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
G + + S + H +++ +++NP +L SD ++W
Sbjct: 321 ASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDK-TARIW 372
Score = 196 (74.1 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 58/236 (24%), Positives = 108/236 (45%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+ LK H + NV+ N G+ + D+ +LW S G + +GH+ +
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTAS-GEELNTL----EGHRNVVYAI 140
Query: 104 AWS-PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
A++ P G+ IA+ SFD T +W +G+ C T GH E+ ++++ +AT S D
Sbjct: 141 AFNNPYGDKIATGSFDKTCKLWSVETGK--CYHTFRGHTAEIVCLSFNPQSTLVATGSMD 198
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+ +W++ +E + H ++ + F+ + + + S+D TV ++ D
Sbjct: 199 TTAKLWDIQNGEE---VYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRK-- 253
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278
+N L H + + S +F+ S + T S D T K+W + G T +D +
Sbjct: 254 VNI--LIGHCAEISSASFNWDCSLILTGSMDKTCKLW-DATNGKCVATLTGHDDEI 306
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 243 (90.6 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 63/244 (25%), Positives = 114/244 (46%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T +GH + +S+NPQ T++++ D +LW +S G + + GH I +
Sbjct: 172 TFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQS-GEE----VVTLTGHLAEIISLS 226
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+ G+ I + SFD T VWD +G+ + + TL GH E+ S +S + + T S DK+
Sbjct: 227 FDTSGDRIITGSFDHTVVVWDASTGR-KVH-TLIGHCAEISSALFSWDCSLILTGSMDKT 284
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+W+ +C A + H ++ F ++A+AS D T +++ +
Sbjct: 285 CMLWDATSG---KCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKC---- 337
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 284
L+ H + ++F+ G+RL T S D T +IW + + G + D ++ C
Sbjct: 338 ITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIW-DVQTGQCLQVLEGHTDEIFSCAFN 396
Query: 285 LSGH 288
G+
Sbjct: 397 YKGN 400
Score = 219 (82.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 59/216 (27%), Positives = 102/216 (47%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH + ++S++ G I + D + +W S G K ++ GH I
Sbjct: 214 TLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDA-STGRK--VHTLI--GHCAEISSAL 268
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+S + I + S D T +WD SG+ C ATL GH++E+ + G+ +AT S D +
Sbjct: 269 FSWDCSLILTGSMDKTCMLWDATSGK--CVATLTGHDDEILDSCFDYTGKLIATASADGT 326
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V+ +C + H ++ K+ F+P N L + S D T +++ +
Sbjct: 327 ARVYNATTR---KCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQC---- 379
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
L+ HT ++S AF+ G+ + T S D + +IW+
Sbjct: 380 LQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIWR 415
Score = 215 (80.7 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 75/295 (25%), Positives = 130/295 (44%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-GQ 154
H + A + G+ + S+D T VWD SG+ E + TLEGH N V ++ ++ G
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTASGE-ELH-TLEGHRNVVYAIAFNNPYGD 148
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
+AT S DK+ +W + +C H ++ + F+P ++A+ S D T KL+
Sbjct: 149 KIATGSFDKTCKLWSA---ETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWD 205
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY---KPGNSAGIP 271
E TL H + + SL+FD G R+ T S D TV +W K G
Sbjct: 206 IQSGE----EVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHC 261
Query: 272 TPDNDSV--WKCVCTLSGHHGRT--IYDISW--CHLT-----DLIATACGDDAIRIFKEN 320
+ ++ W C L+G +T ++D + C T D I +C D ++
Sbjct: 262 AEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATA 321
Query: 321 PEAGDSDMVSFDLVH--TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
G + + + T+ H +++ +++NP +L SD ++W ++
Sbjct: 322 SADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDK-TARIWDVQ 375
Score = 206 (77.6 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 60/216 (27%), Positives = 102/216 (47%)
Query: 45 TLKGHQGRVWNVSWN-PQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
TL+GH+ V+ +++N P G I++ DK +LW E+ T + GH I
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFR-----GHTAEIVCL 183
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+++P +A+ S D T +WD +SG+ E TL GH E+ S+++ +G + T S D
Sbjct: 184 SFNPQSTVVATGSMDTTAKLWDIQSGE-EV-VTLTGHLAEIISLSFDTSGDRIITGSFDH 241
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
+V VW+ + + H ++ F +++ + S D T L+ D +
Sbjct: 242 TVVVWDASTGRKVH---TLIGHCAEISSALFSWDCSLILTGSMDKTCMLW--DATSGKCV 296
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
ATL H + FD G +AT S D T +++
Sbjct: 297 --ATLTGHDDEILDSCFDYTGKLIATASADGTARVY 330
Score = 181 (68.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 55/236 (23%), Positives = 106/236 (44%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+ L+ H + NV+ N G+ + D+ ++W S T +GH+ +
Sbjct: 86 KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTL-----EGHRNVVYAI 140
Query: 104 AWS-PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
A++ P G+ IA+ SFD T +W +G+ C T GH E+ ++++ +AT S D
Sbjct: 141 AFNNPYGDKIATGSFDKTCKLWSAETGK--CYHTFRGHTAEIVCLSFNPQSTVVATGSMD 198
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+ +W++ +E + H+ ++ + F + + + S+D TV ++ D +
Sbjct: 199 TTAKLWDIQSGEE---VVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVW--DASTGRK 253
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278
++ TL H + + S F S + T S D T +W + G T +D +
Sbjct: 254 VH--TLIGHCAEISSALFSWDCSLILTGSMDKTCMLW-DATSGKCVATLTGHDDEI 306
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 242 (90.2 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 68/228 (29%), Positives = 108/228 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TLKGH V +++ + G + SC D +I+LW FG + L GH+ T+
Sbjct: 142 RTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLW---DFGQTYDCLKSLK-GHEHTVSSV 197
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+ P G+F+ SAS D T WD +G C T GH + V+ + S +G A+ S D+
Sbjct: 198 TFLPTGDFVLSASRDHTIKQWDISTGY--CVYTFRGHNDWVRMIRISNDGTLFASASLDQ 255
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP---FDNILASASYDDTVK-LFK--EDK 217
+V VW + V+ H V+ V + P + N+ ++ LF D+
Sbjct: 256 TVTVWSFATKS---AKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDR 312
Query: 218 AEADW-INFA----TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
+ W IN TL +H + V LAF G L + +DD T+++W+
Sbjct: 313 SIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWE 360
Score = 219 (82.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 54/172 (31%), Positives = 88/172 (51%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+Q L GH+ + V ++P T+++SC ED I++W E+ + T K GH + +
Sbjct: 99 TQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLK-----GHTDAVND 153
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCSR 161
A G + S S D + +WD GQ ++C +L+GHE+ V SVT+ G F+ + SR
Sbjct: 154 IAIDAAGKQLVSCSSDLSIKLWD--FGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASR 211
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
D ++ W++ Y C H V+ +R + ASAS D TV ++
Sbjct: 212 DHTIKQWDISTG--Y-CVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVW 260
Score = 173 (66.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 60/232 (25%), Positives = 100/232 (43%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
++LKGH+ V +V++ P G + S D I+ W + +T + GH +R
Sbjct: 185 KSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFR-----GHNDWVRMI 239
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-------GQ-- 154
S G ASAS D T VW + L HE+ V+ V W+ + GQ
Sbjct: 240 RISNDGTLFASASLDQTVTVWSFATKS--AKLVLRDHEHAVECVEWAPDTAYTNVTGQQP 297
Query: 155 ------FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208
L + SRD+S+ W + D + AH V+ + FHP L S + D
Sbjct: 298 EGNSTHILFSGSRDRSIKAWNINTGD---VLFTLLAHENWVRGLAFHPKGKYLISVADDK 354
Query: 209 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
T+++++ +++H V ++AF + + T S D + K+W+
Sbjct: 355 TLRVWELSAQRC----MKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 37/134 (27%), Positives = 63/134 (47%)
Query: 182 INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 241
+ H + +V FHP I+AS S D T+K++ + + + TLK HT V +A D
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLE----RTLKGHTDAVNDIAID 157
Query: 242 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 301
G +L +CS D ++K+W D + C+ +L GH T+ +++
Sbjct: 158 AAGKQLVSCSSDLSIKLW--------------DFGQTYDCLKSLKGHE-HTVSSVTFLPT 202
Query: 302 TDLIATACGDDAIR 315
D + +A D I+
Sbjct: 203 GDFVLSASRDHTIK 216
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 243 (90.6 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 68/216 (31%), Positives = 109/216 (50%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH+ + ++ +P G +++ D + LW +F K A+A GH+ + +S
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLW---NF--KPHARAYRYVGHKDVVTSVQFS 69
Query: 107 PCGNFIASASFDATTAVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
P GN +ASAS D T +W DKR G+F + + H V+SV +S +GQFLAT S DKS
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKR-GKF---SEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+ VW + + + H V+ +F P ++ S S D T+K++ D +N
Sbjct: 126 IKVWSMYRQ---RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTNKQCVN 180
Query: 225 -FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
F+ + V F+ G+ +A+ D TVK+W
Sbjct: 181 NFSDSVGFANFV---DFNPSGTCIASAGSDQTVKVW 213
Score = 215 (80.7 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 61/214 (28%), Positives = 98/214 (45%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
K H V +V ++ G +++ EDK+I++W + +F H +R +S
Sbjct: 99 KAHTAPVRSVDFSADGQFLATASEDKSIKVWSM--YRQRFLYSLYR---HTHWVRCAKFS 153
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
P G I S S D T +WD + Q C V ++ +G +A+ D++V
Sbjct: 154 PDGRLIVSCSEDKTIKIWDTTNKQ--CVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVK 211
Query: 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA 226
VW+V + V H V + FHP DN L +AS D T+K+ D E I
Sbjct: 212 VWDVRVNKLLQHYQV---HSGGVNCISFHPSDNYLVTASSDGTLKIL--DLLEGRLIY-- 264
Query: 227 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
TL+ HT V++++F + G A+ D V +W+
Sbjct: 265 TLQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 298
Score = 210 (79.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 60/212 (28%), Positives = 104/212 (49%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTA-KAILSDGHQRTIRETAWS 106
GH+ V +V ++P G +++S D+ +RLW + G KF+ KA H +R +S
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRG-KFSEFKA-----HTAPVRSVDFS 111
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
G F+A+AS D + VW +F + L H + V+ +S +G+ + +CS DK++
Sbjct: 112 ADGQFLATASEDKSIKVWSMYRQRFLYS--LYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 169
Query: 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA 226
+W+ + +C + + V F+P +ASA D TVK++ D +
Sbjct: 170 IWDTTNK---QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW--DVRVNKLLQHY 224
Query: 227 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
+ H+ V ++F + L T S D T+KI
Sbjct: 225 QV--HSGGVNCISFHPSDNYLVTASSDGTLKI 254
Score = 185 (70.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 74/252 (29%), Positives = 116/252 (46%)
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
+GH+ + S+ S NG+ LAT S D + +W + A H V V+F P
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNF---KPHARAYRYVGHKDVVTSVQFSPH 71
Query: 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257
N+LASAS D TV+L+ DK F+ K+HT+ V S+ F G LAT S+D ++K
Sbjct: 72 GNLLASASRDRTVRLWIPDKRG----KFSEFKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS---WCHLTDLIATACGD--- 311
+W Y+ + + + W C GR I S + D C +
Sbjct: 128 VWSMYR---QRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 312 DAIRI--FKE-NPE------AGDSDMVS-FDL-VHT--EH-RAHNQDVNCVAWNPVVPGM 357
D++ F + NP AG V +D+ V+ +H + H+ VNC++++P
Sbjct: 184 DSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS-DNY 242
Query: 358 LASCSDDGDVKL 369
L + S DG +K+
Sbjct: 243 LVTASSDGTLKI 254
Score = 151 (58.2 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 56 VSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA 115
V +NP GT I+S G D+ +++W NK + G I ++ P N++ +A
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWDVRV--NKLLQHYQVHSGGVNCI---SFHPSDNYLVTA 246
Query: 116 SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175
S D T + D G+ TL+GH V +V++SK G+ A+ D V +W DE
Sbjct: 247 SSDGTLKILDLLEGRLIY--TLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNF-DE 303
Query: 176 YECAAVINAHIQDVKKVRF 194
C +N +++K++ F
Sbjct: 304 LHCKG-LNK--RNLKRLHF 319
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 49/189 (25%), Positives = 79/189 (41%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG--KESFGNKFTAKAILSDGHQRTIRE 102
+L H V ++P G +I SC EDK I++W + N F+ S G +
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD----SVGFANFVD- 193
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
++P G IASA D T VWD R + + + H V +++ + +L T S D
Sbjct: 194 --FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV--HSGGVNCISFHPSDNYLVTASSD 249
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE--DKAEA 220
++ + ++ E + H V V F + AS D V L++ D+
Sbjct: 250 GTLKILDLLEG---RLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHC 306
Query: 221 DWINFATLK 229
+N LK
Sbjct: 307 KGLNKRNLK 315
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 244 (91.0 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 71/226 (31%), Positives = 108/226 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 259 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 313
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W N AS S D V + GQ T +GH NEV ++ W G LA+CS D
Sbjct: 314 VDWQS-NNTFASCSTDMCIHVC--KLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 370
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----DN-----ILASASYDDTVKLF 213
++ +W + +++ C + AH +++ +++ P +N +LASAS+D TV+L+
Sbjct: 371 MTLKIWSMKQDN---CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D+ I TL H V+S+AF G LA+ S D V IW
Sbjct: 428 DVDRG----ICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 218 (81.8 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 57/223 (25%), Positives = 102/223 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG----KESFGNKFTAKAILSDGHQ---- 97
L+GH+ V+ +WNP +++S D R+W S + + + +G Q
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 98 -RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ + W+ G +A+ S+D +W K G +TL H+ + ++ W+K G F+
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWTK-DGNLA--STLGQHKGPIFALKWNKKGNFI 281
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+ DK+ +W+ + + +A DV +N AS S D + + K
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD----WQSNNTFASCSTDMCIHVCKLG 337
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ T + HT+ V ++ +D G+ LA+CSDD T+KIW
Sbjct: 338 QDRP----IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 69/299 (23%), Positives = 123/299 (41%)
Query: 89 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD----KRSGQFEC---NATLEGHE 141
KA++ GH+ + AW+P + +AS S D+T +W+ SG + + EG +
Sbjct: 161 KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQ 220
Query: 142 N-----EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196
+ +V S+ W+ G LAT S D +W + A+ + H + ++++
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT----KDGNLASTLGQHKGPIFALKWNK 276
Query: 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
N + SA D T ++ EA H++ + + + A+CS D +
Sbjct: 277 KGNFILSAGVDKTTIIWDAHTGEAK----QQFPFHSAPALDVDWQS-NNTFASCSTDMCI 331
Query: 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIR 315
+ K G P + T GH + I W +L+A+ C DD ++
Sbjct: 332 HVCK-------LGQDRP--------IKTFQGHTNE-VNAIKWDPTGNLLAS-CSDDMTLK 374
Query: 316 IFKENPEAGDSDMVSFDL-VHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
I+ + D+ + + ++T + N NP MLAS S D V+LW +
Sbjct: 375 IWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN----NPNANLMLASASFDSTVRLWDV 429
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 244 (91.0 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 71/226 (31%), Positives = 108/226 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 259 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 313
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W N AS S D V + GQ T +GH NEV ++ W G LA+CS D
Sbjct: 314 VDWQS-NNTFASCSTDMCIHVC--KLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 370
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----DN-----ILASASYDDTVKLF 213
++ +W + +++ C + AH +++ +++ P +N +LASAS+D TV+L+
Sbjct: 371 MTLKIWSMKQDN---CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D+ I TL H V+S+AF G LA+ S D V IW
Sbjct: 428 DVDRG----ICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 218 (81.8 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 57/223 (25%), Positives = 102/223 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG----KESFGNKFTAKAILSDGHQ---- 97
L+GH+ V+ +WNP +++S D R+W S + + + +G Q
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 98 -RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ + W+ G +A+ S+D +W K G +TL H+ + ++ W+K G F+
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWTK-DGNLA--STLGQHKGPIFALKWNKKGNFI 281
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+ DK+ +W+ + + +A DV +N AS S D + + K
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD----WQSNNTFASCSTDMCIHVCKLG 337
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ T + HT+ V ++ +D G+ LA+CSDD T+KIW
Sbjct: 338 QDRP----IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 69/299 (23%), Positives = 123/299 (41%)
Query: 89 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD----KRSGQFEC---NATLEGHE 141
KA++ GH+ + AW+P + +AS S D+T +W+ SG + + EG +
Sbjct: 161 KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQ 220
Query: 142 N-----EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196
+ +V S+ W+ G LAT S D +W + A+ + H + ++++
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT----KDGNLASTLGQHKGPIFALKWNK 276
Query: 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
N + SA D T ++ EA H++ + + + A+CS D +
Sbjct: 277 KGNFILSAGVDKTTIIWDAHTGEAK----QQFPFHSAPALDVDWQS-NNTFASCSTDMCI 331
Query: 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIR 315
+ K G P + T GH + I W +L+A+ C DD ++
Sbjct: 332 HVCK-------LGQDRP--------IKTFQGHTNE-VNAIKWDPTGNLLAS-CSDDMTLK 374
Query: 316 IFKENPEAGDSDMVSFDL-VHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
I+ + D+ + + ++T + N NP MLAS S D V+LW +
Sbjct: 375 IWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN----NPNANLMLASASFDSTVRLWDV 429
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 244 (91.0 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 71/226 (31%), Positives = 108/226 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 259 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 313
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W N AS S D V + GQ T +GH NEV ++ W G LA+CS D
Sbjct: 314 VDWQS-NNTFASCSTDMCIHVC--KLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 370
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----DN-----ILASASYDDTVKLF 213
++ +W + +++ C + AH +++ +++ P +N +LASAS+D TV+L+
Sbjct: 371 MTLKIWSMKQDN---CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D+ I TL H V+S+AF G LA+ S D V IW
Sbjct: 428 DVDRG----ICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 216 (81.1 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 57/223 (25%), Positives = 103/223 (46%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG---KESFG-NKFTAKAILSDGHQ---- 97
L+GH+ V+ +WNP +++S D R+W + G + + + +G Q
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 98 -RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ + W+ G +A+ S+D +W K G +TL H+ + ++ W+K G F+
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWTK-DGNLA--STLGQHKGPIFALKWNKKGNFI 281
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+ DK+ +W+ + + +A DV +N AS S D + + K
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD----WQSNNTFASCSTDMCIHVCKLG 337
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ T + HT+ V ++ +D G+ LA+CSDD T+KIW
Sbjct: 338 QDRP----IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 69/299 (23%), Positives = 123/299 (41%)
Query: 89 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD----KRSGQFEC---NATLEGHE 141
KA++ GH+ + AW+P + +AS S D+T +W+ SG + + EG +
Sbjct: 161 KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQ 220
Query: 142 N-----EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196
+ +V S+ W+ G LAT S D +W + A+ + H + ++++
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT----KDGNLASTLGQHKGPIFALKWNK 276
Query: 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
N + SA D T ++ EA H++ + + + A+CS D +
Sbjct: 277 KGNFILSAGVDKTTIIWDAHTGEAK----QQFPFHSAPALDVDWQS-NNTFASCSTDMCI 331
Query: 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIR 315
+ K G P + T GH + I W +L+A+ C DD ++
Sbjct: 332 HVCK-------LGQDRP--------IKTFQGHTNE-VNAIKWDPTGNLLAS-CSDDMTLK 374
Query: 316 IFKENPEAGDSDMVSFDL-VHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
I+ + D+ + + ++T + N NP MLAS S D V+LW +
Sbjct: 375 IWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN----NPNANLMLASASFDSTVRLWDV 429
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 244 (91.0 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 71/226 (31%), Positives = 108/226 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 259 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 313
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W N AS S D V + GQ T +GH NEV ++ W G LA+CS D
Sbjct: 314 VDWQS-NNTFASCSTDMCIHVC--KLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 370
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----DN-----ILASASYDDTVKLF 213
++ +W + +++ C + AH +++ +++ P +N +LASAS+D TV+L+
Sbjct: 371 MTLKIWSMKQDN---CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D+ I TL H V+S+AF G LA+ S D V IW
Sbjct: 428 DVDRG----ICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 216 (81.1 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 57/223 (25%), Positives = 103/223 (46%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG---KESFG-NKFTAKAILSDGHQ---- 97
L+GH+ V+ +WNP +++S D R+W + G + + + +G Q
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 98 -RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ + W+ G +A+ S+D +W K G +TL H+ + ++ W+K G F+
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWTK-DGNLA--STLGQHKGPIFALKWNKKGNFI 281
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+ DK+ +W+ + + +A DV +N AS S D + + K
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD----WQSNNTFASCSTDMCIHVCKLG 337
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ T + HT+ V ++ +D G+ LA+CSDD T+KIW
Sbjct: 338 QDRP----IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 69/299 (23%), Positives = 123/299 (41%)
Query: 89 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD----KRSGQFEC---NATLEGHE 141
KA++ GH+ + AW+P + +AS S D+T +W+ SG + + EG +
Sbjct: 161 KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQ 220
Query: 142 N-----EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196
+ +V S+ W+ G LAT S D +W + A+ + H + ++++
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT----KDGNLASTLGQHKGPIFALKWNK 276
Query: 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
N + SA D T ++ EA H++ + + + A+CS D +
Sbjct: 277 KGNFILSAGVDKTTIIWDAHTGEAK----QQFPFHSAPALDVDWQS-NNTFASCSTDMCI 331
Query: 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIR 315
+ K G P + T GH + I W +L+A+ C DD ++
Sbjct: 332 HVCK-------LGQDRP--------IKTFQGHTNE-VNAIKWDPTGNLLAS-CSDDMTLK 374
Query: 316 IFKENPEAGDSDMVSFDL-VHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
I+ + D+ + + ++T + N NP MLAS S D V+LW +
Sbjct: 375 IWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN----NPNANLMLASASFDSTVRLWDV 429
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 246 (91.7 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 63/232 (27%), Positives = 113/232 (48%)
Query: 40 MINSQTLKGH-QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
M N + K H Q ++ +S++P ++SC +DK I++W F ++ GH
Sbjct: 198 MNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIW---DFARCTEDNQLV--GHGW 252
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN-ATLEGHENEVKSVTWSKNGQFLA 157
++ +W P + I S D +WD +S Q N TL GH++ V V W++NG ++
Sbjct: 253 DVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQ---NITTLHGHKSTVSKVEWNQNGNWIV 309
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKED 216
+ S D+ + V+++ E + H ++V + HP+ +++ S D + +
Sbjct: 310 SASSDQLLKVFDIRTMKEMQ---TFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWIVG 366
Query: 217 KAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 267
E A + S H + VWSL++ IG LA+ S+D T K W +P ++
Sbjct: 367 NPEPQ----AEIHSAHDADVWSLSWHPIGHILASGSNDHTTKFWSRNRPADT 414
Score = 224 (83.9 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 62/183 (33%), Positives = 94/183 (51%)
Query: 36 SRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG 95
+RC N L GH V VSW+PQ ++I S G+D NI++W +S N T G
Sbjct: 239 ARCTEDNQ--LVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLH-----G 291
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
H+ T+ + W+ GN+I SAS D V+D R+ + E T +GH EV ++ +
Sbjct: 292 HKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMK-EMQ-TFKGHGKEVTALALHPYHED 349
Query: 156 L-ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
L + +D + W VG + A + +AH DV + +HP +ILAS S D T K +
Sbjct: 350 LFVSGDKDGKILYWIVGNPEPQ--AEIHSAHDADVWSLSWHPIGHILASGSNDHTTKFWS 407
Query: 215 EDK 217
++
Sbjct: 408 RNR 410
Score = 179 (68.1 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 48/205 (23%), Positives = 91/205 (44%)
Query: 56 VSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA 115
VSW P+G + + LW G F + IL H +R WS +++ S
Sbjct: 131 VSWTPEGRRLVTGSSSGEFTLWN----GLTFNFETILQ-AHDSAVRSIIWSHNEDWMVSG 185
Query: 116 SFDATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174
W + + HE ++++ +++S LA+C+ DK + +W+
Sbjct: 186 DDSGNIKYWQPNMNNVKI---FKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCT 242
Query: 175 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 234
E + H DVK V +HP +++ S D+ +K++ ++ N TL H ST
Sbjct: 243 EDN---QLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQ----NITTLHGHKST 295
Query: 235 VWSLAFDRIGSRLATCSDDATVKIW 259
V + +++ G+ + + S D +K++
Sbjct: 296 VSKVEWNQNGNWIVSASSDQLLKVF 320
Score = 165 (63.1 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 65/252 (25%), Positives = 105/252 (41%)
Query: 42 NSQT-LKGHQGRVWNVSWNP-QGTMISSCGEDK-NIRLWGKESFGNKFTAKAILSDGHQR 98
N +T L+ H V ++ W+ + M+S G+D NI+ W + + N KA H++
Sbjct: 158 NFETILQAHDSAVRSIIWSHNEDWMVS--GDDSGNIKYW-QPNMNNVKIFKA-----HEQ 209
Query: 99 T-IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 157
+ IR ++SP +AS + D +WD E N L GH +VK V+W +
Sbjct: 210 SKIRGLSFSPTDLKLASCADDKIIKIWDFARCT-EDNQ-LVGHGWDVKCVSWHPQKSLIV 267
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217
+ +D ++ +W+ ++ H V KV ++ N + SAS D +K+F
Sbjct: 268 SGGKDNNIKIWDAKSSQNI---TTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRT 324
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDND 276
+ T K H V +LA L D D + W P A I + +
Sbjct: 325 MK----EMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWIVGNPEPQAEIHSAHDA 380
Query: 277 SVWKCVCTLSGH 288
VW GH
Sbjct: 381 DVWSLSWHPIGH 392
Score = 69 (29.3 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 338 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
H AH+ DV ++W+P+ +LAS S+D K W
Sbjct: 375 HSAHDADVWSLSWHPI-GHILASGSNDHTTKFW 406
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 243 (90.6 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 68/216 (31%), Positives = 109/216 (50%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH+ + ++ +P G +++ D + LW +F K A+A GH+ + +S
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLW---NF--KPHARAYRYVGHKDVVTSVQFS 69
Query: 107 PCGNFIASASFDATTAVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
P GN +ASAS D T +W DKR G+F + + H V+SV +S +GQFLAT S DKS
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKR-GKF---SEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+ VW + + + H V+ +F P ++ S S D T+K++ D +N
Sbjct: 126 IKVWSMYRQ---RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTNKQCVN 180
Query: 225 -FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
F+ + V F+ G+ +A+ D TVK+W
Sbjct: 181 NFSDSVGFANFV---DFNPSGTCIASAGSDQTVKVW 213
Score = 216 (81.1 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 61/212 (28%), Positives = 105/212 (49%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTA-KAILSDGHQRTIRETAWS 106
GH+ V +V ++P G +++S D+ +RLW + G KF+ KA H +R +S
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRG-KFSEFKA-----HTAPVRSVDFS 111
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
G F+A+AS D + VW +F + L H + V+ +S +G+ + +CS DK++
Sbjct: 112 ADGQFLATASEDKSIKVWSMYRQRFLYS--LYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 169
Query: 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA 226
+W+ + +C + + V F+P +ASA D TVK++ D +
Sbjct: 170 IWDTTNK---QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW--DVRVNKLLQHY 224
Query: 227 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
+ H+ V ++F G+ L T S D T+KI
Sbjct: 225 QV--HSGGVNCISFHPSGNYLITASSDGTLKI 254
Score = 207 (77.9 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 60/214 (28%), Positives = 97/214 (45%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
K H V +V ++ G +++ EDK+I++W + +F H +R +S
Sbjct: 99 KAHTAPVRSVDFSADGQFLATASEDKSIKVWSM--YRQRFLYSLYR---HTHWVRCAKFS 153
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
P G I S S D T +WD + Q C V ++ +G +A+ D++V
Sbjct: 154 PDGRLIVSCSEDKTIKIWDTTNKQ--CVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVK 211
Query: 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA 226
VW+V + V H V + FHP N L +AS D T+K+ D E I
Sbjct: 212 VWDVRVNKLLQHYQV---HSGGVNCISFHPSGNYLITASSDGTLKIL--DLLEGRLIY-- 264
Query: 227 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
TL+ HT V++++F + G A+ D V +W+
Sbjct: 265 TLQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 298
Score = 183 (69.5 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 74/252 (29%), Positives = 116/252 (46%)
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
+GH+ + S+ S NG+ LAT S D + +W + A H V V+F P
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNF---KPHARAYRYVGHKDVVTSVQFSPH 71
Query: 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257
N+LASAS D TV+L+ DK F+ K+HT+ V S+ F G LAT S+D ++K
Sbjct: 72 GNLLASASRDRTVRLWIPDKRG----KFSEFKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS---WCHLTDLIATACGD--- 311
+W Y+ + + + W C GR I S + D C +
Sbjct: 128 VWSMYR---QRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 312 DAIRI--FKE-NPE------AGDSDMVS-FDL-VHT--EH-RAHNQDVNCVAWNPVVPGM 357
D++ F + NP AG V +D+ V+ +H + H+ VNC++++P
Sbjct: 184 DSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS-GNY 242
Query: 358 LASCSDDGDVKL 369
L + S DG +K+
Sbjct: 243 LITASSDGTLKI 254
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 56 VSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA 115
V +NP GT I+S G D+ +++W NK + G I ++ P GN++ +A
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWDVRV--NKLLQHYQVHSGGVNCI---SFHPSGNYLITA 246
Query: 116 SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175
S D T + D G+ TL+GH V +V++SK G+ A+ D V +W DE
Sbjct: 247 SSDGTLKILDLLEGRLIY--TLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNF-DE 303
Query: 176 YECAAVINAHIQDVKKVRF 194
C + +++K++ F
Sbjct: 304 LHCKGLTK---RNLKRLHF 319
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 46/172 (26%), Positives = 74/172 (43%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG--KESFGNKFTAKAILSDGHQRTIRE 102
+L H V ++P G +I SC EDK I++W + N F+ S G +
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD----SVGFANFVD- 193
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
++P G IASA D T VWD R + + + H V +++ +G +L T S D
Sbjct: 194 --FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV--HSGGVNCISFHPSGNYLITASSD 249
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
++ + ++ E + H V V F + AS D V L++
Sbjct: 250 GTLKILDLLEG---RLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 298
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 247 (92.0 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 63/218 (28%), Positives = 100/218 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH G V+ S++P + SC ED +RLW ++F K GH + +T +
Sbjct: 519 LYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYK-----GHNYPVWDTQF 573
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
SP G + S D +W + ++ GH +V + N ++AT S D++V
Sbjct: 574 SPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTV 631
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+W+V + C + H + + F P LA+ + D V L+ D +
Sbjct: 632 RLWDVLNGN---CVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLW--DIGHG--LMV 684
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
LK HT T+++L F R G LA+ S D TV++W K
Sbjct: 685 GELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVK 722
Score = 232 (86.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 59/187 (31%), Positives = 90/187 (48%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH VW+ ++P G S G D+ RLW + + I + GH + T +
Sbjct: 562 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY----QPLRIFA-GHLADVTCTRFH 616
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
P N+IA+ S D T +WD +G C GH+ + S+ +S NG+FLAT + D V
Sbjct: 617 PNSNYIATGSADRTVRLWDVLNGN--CVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVL 674
Query: 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA--EADWIN 224
+W++G + H + +RF ILAS S D+TV+L+ KA + + +
Sbjct: 675 LWDIGHG---LMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDD 731
Query: 225 FATLKSH 231
F T H
Sbjct: 732 FTTATGH 738
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 246 (91.7 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 71/226 (31%), Positives = 106/226 (46%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN G I S G DK +W + + T + H +
Sbjct: 444 ASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDAST--GQCTQQFAF---HSAPALD 498
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W F AS S D V R G E T +GH NEV ++ W GQ LA+CS D
Sbjct: 499 VDWQTNQAF-ASCSTDQRIHVC--RLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDD 555
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----DN-----ILASASYDDTVKLF 213
++ +W + + C + AH +++ +++ P +N ILASAS+D TV+L+
Sbjct: 556 MTLKIWSMNRD---RCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLW 612
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
++ TL HT V+S+AF G LA+ S D V IW
Sbjct: 613 DVERGSC----IHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIW 654
Score = 208 (78.3 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 54/225 (24%), Positives = 100/225 (44%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG---NKFTAKAILSDG---- 95
++ L+GH+ V+ +WNP +++S D R+W N+ + + G
Sbjct: 348 ARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEV 407
Query: 96 -HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
+ + W+ G+ +A+ S+D +W K G+ +TL H+ + ++ W+K G
Sbjct: 408 PSNKDVTSLDWNCDGSLLATGSYDGYARIW-KTDGRLA--STLGQHKGPIFALKWNKCGN 464
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
++ + DK+ +W+ +C H V + + AS S D + + +
Sbjct: 465 YILSAGVDKTTIIWDASTG---QCTQQFAFHSAPALDVDWQT-NQAFASCSTDQRIHVCR 520
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
E T K HT+ V ++ + G LA+CSDD T+KIW
Sbjct: 521 LGVNEP----IKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIW 561
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 68/300 (22%), Positives = 123/300 (41%)
Query: 88 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH------- 140
+KA + GH+ + AW+P + +AS S D+T +WD N + H
Sbjct: 346 SKARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGA 405
Query: 141 ----ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196
+V S+ W+ +G LAT S D +W+ + A+ + H + ++++
Sbjct: 406 EVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKT----DGRLASTLGQHKGPIFALKWNK 461
Query: 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
N + SA D T ++ + FA H++ + + + A+CS D +
Sbjct: 462 CGNYILSAGVDKTTIIWDASTGQCTQ-QFAF---HSAPALDVDW-QTNQAFASCSTDQRI 516
Query: 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIR 315
+ + G+ P + T GH + I WC L+A+ C DD ++
Sbjct: 517 HVCR-------LGVNEP--------IKTFKGHTNE-VNAIKWCPQGQLLAS-CSDDMTLK 559
Query: 316 IFKENPEAGDSDMVSFDL-VHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
I+ N + D+ + ++T + N NP +LAS S D V+LW ++
Sbjct: 560 IWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTN----NPNTNLILASASFDSTVRLWDVE 615
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 218 (81.8 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 60/223 (26%), Positives = 109/223 (48%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L+GH+G ++ ++P+G ++ S G D+ I +W + + + A+ GH + E +
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIW--QVYEDCENVMAM--SGHSGAVMEAHF 106
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKS 164
+P G+ I + S D T A WD +GQ + +GH N V SV S+ GQ L + S D++
Sbjct: 107 TPDGSHIFTCSTDKTLAFWDIATGQRQ--RRFKGHGNFVNSVQGSRRGQQLLCSGSDDRT 164
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+ +W+ ++ A + + Q V V F + S D+ VK++ K
Sbjct: 165 IKIWDARKK---HAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAV---- 216
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW--KEYKPG 265
L+ H+ T+ ++ G + T + D T+++W + Y PG
Sbjct: 217 LHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPG 259
Score = 144 (55.7 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 48/175 (27%), Positives = 78/175 (44%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD--GHQRTIRETAWSPCG 109
+V V + G + S G D +++W +A+L GH TI + SP G
Sbjct: 184 QVTAVCFGDTGEQVISGGIDNEVKIWD-------IRKQAVLHHLRGHSDTITGMSLSPEG 236
Query: 110 NFIASASFDATTAVWDKRS---GQFECNATLEGHE-NEVKSV---TWSKNGQFLATCSRD 162
+FI + + D T VWD R G+ C +GH+ N K++ WS + + S D
Sbjct: 237 DFILTNAMDNTLRVWDVRPYAPGE-RCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSAD 295
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217
+ V++W+V + H V V F P + ++ S S D T+ L + D+
Sbjct: 296 RHVYIWDVNTR---RILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEIDE 347
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET-- 103
L+GH + +S +P+G I + D +R+W + + GHQ +
Sbjct: 220 LRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQ-GHQHNFEKNLL 278
Query: 104 --AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
AWSP + I S S D +WD + + L GH V +V +S + + S
Sbjct: 279 RCAWSPGSDKITSGSADRHVYIWDVNTRRILYK--LPGHNGSVNAVDFSPKEPLILSGSS 336
Query: 162 DKSVWVWEVGE 172
DK++++ E+ E
Sbjct: 337 DKTLYLGEIDE 347
Score = 131 (51.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 39/138 (28%), Positives = 66/138 (47%)
Query: 137 LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196
LEGHE E+ + + G+ L + D+ +++W+V E+ E A ++ H V + F P
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMA--MSGHSGAVMEAHFTP 108
Query: 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDDAT 255
+ + + S D T+ + D A K H + V S+ R G +L + SDD T
Sbjct: 109 DGSHIFTCSTDKTLAFW--DIATGQ--RQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRT 164
Query: 256 VKIWKEYKPGNSAGIPTP 273
+KIW K + + +P
Sbjct: 165 IKIWDARKKHAAHTLESP 182
Score = 124 (48.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 63/275 (22%), Positives = 106/275 (38%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQ 97
CE N + GH G V + P G+ I +C DK + W + + K GH
Sbjct: 88 CE--NVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFK-----GHG 140
Query: 98 RTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ S G + S S D T +WD R TLE +V +V + G+ +
Sbjct: 141 NFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKH--AAHTLES-PFQVTAVCFGDTGEQV 197
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE- 215
+ D V +W++ ++ + H + + P + + + + D+T++++
Sbjct: 198 ISGGIDNEVKIWDIRKQAVLHH---LRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVR 254
Query: 216 -----DKA----EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE----- 261
++ + NF K+ WS D+I S A D V IW
Sbjct: 255 PYAPGERCVKVFQGHQHNFE--KNLLRCAWSPGSDKITSGSA----DRHVYIWDVNTRRI 308
Query: 262 -YK-PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY 294
YK PG++ + D K LSG +T+Y
Sbjct: 309 LYKLPGHNGSVNAVDFSP--KEPLILSGSSDKTLY 341
Score = 55 (24.4 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 280 KCVCTLSGH-HG--RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT 336
+CV GH H + + +W +D I + D + I+ N + + L
Sbjct: 261 RCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRR-----ILYKLP-- 313
Query: 337 EHRAHNQDVNCVAWNPVVPGMLASCSD 363
HN VN V ++P P +L+ SD
Sbjct: 314 ---GHNGSVNAVDFSPKEPLILSGSSD 337
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 245 (91.3 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 69/247 (27%), Positives = 112/247 (45%)
Query: 42 NS-QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
NS Q L GH + ++ +G+M ++C +DK++R+W + + A GH +
Sbjct: 377 NSCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVA-QGTGHSNAV 435
Query: 101 RETAWSPCGN-FIASASFDATTAVWD--KRSG-----QFECNATLEGHENEVKSVTWSKN 152
A S F+ S S D T VWD + +G + +T HE +V SV S N
Sbjct: 436 GSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPN 495
Query: 153 GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 212
+ LA+ S+D++ +W + + V H + V V+F P D IL SAS D +V++
Sbjct: 496 DKLLASGSQDRTAKLWALSD---LRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRI 552
Query: 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPT 272
+ D+ T + H ++V + F G++L + D VK+W K
Sbjct: 553 WSIQ----DFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWT-IKTNECVRTLD 607
Query: 273 PDNDSVW 279
D VW
Sbjct: 608 AHQDKVW 614
Score = 168 (64.2 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 55/219 (25%), Positives = 90/219 (41%)
Query: 48 GHQGRVWNVSWNP-QGTMISSCGEDKNIRLWG-KESFGNK--FTAKAILSD-GHQRTIRE 102
GH V +++ + + + S +D +++W E+ G + KA ++ H++ +
Sbjct: 430 GHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNS 489
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
SP +AS S D T +W GH V SV +S Q L + S D
Sbjct: 490 VCVSPNDKLLASGSQDRTAKLW--ALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASAD 547
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
SV +W + ++ C H V K+ F L S+ D VKL+ E
Sbjct: 548 GSVRIWSI---QDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNEC-- 602
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261
TL +H VW+L + T S D+T+ +W +
Sbjct: 603 --VRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWTD 639
Score = 146 (56.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 84/358 (23%), Positives = 145/358 (40%)
Query: 36 SRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-D 94
SRC + L+ H V ++++P G + S G DK +W + K T + +
Sbjct: 182 SRCVCV----LESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVE 237
Query: 95 GHQRTIRETAWSPCGN-----FIASASFDATTAVWDKRSGQFECNATL---------EGH 140
G +S G + +A VWD S + TL E
Sbjct: 238 GVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCVFTQTLPDASSHTEDEDA 297
Query: 141 ENE-----VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195
E+E ++ + + G+ L T + + ++ +++ + N + DVK V
Sbjct: 298 EDEERLGLLQLLLLPRTGR-LITVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKD 356
Query: 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255
D +A A+ +K+F E + L HT T+ S+ R GS ATC+ D +
Sbjct: 357 --DTHIAVATNSSQLKVF-----ELSTNSCQILHGHTDTILSIDVFRKGSMFATCAKDKS 409
Query: 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAI 314
V++W+ S+G V CV +GH + I+ + + + D +
Sbjct: 410 VRVWRM---DVSSG-------RV-HCVAQGTGH-SNAVGSIACSRMKQQFVVSGSQDCTV 457
Query: 315 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
+++ + PE ++ V + RAH +DVN V +P +LAS S D KLW +
Sbjct: 458 KVW-DLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPN-DKLLASGSQDRTAKLWAL 513
Score = 139 (54.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 36/161 (22%), Positives = 74/161 (45%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
+GH+ VW+V ++P ++ S D ++R+W + F K +GH ++ + +
Sbjct: 523 RGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFS---CLKTF--EGHDASVLKIIFV 577
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
G + S+ D +W ++ EC TL+ H+++V ++ + + T S D ++
Sbjct: 578 SRGTQLVSSGSDGLVKLWTIKTN--ECVRTLDAHQDKVWALHGGCRDELMVTGSADSTIT 635
Query: 167 VWEVGEEDEYECAAVINAHIQ-DVKKVRFHPFDNILASASY 206
VW D+ +I + + D +F F N++ Y
Sbjct: 636 VWT----DKLRKTVIIKSTKKVDQSLFKFTHFRNLIYXYYY 672
Score = 112 (44.5 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 48/178 (26%), Positives = 75/178 (42%)
Query: 87 TAKAI--LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG-HENE 143
T K I + Q I A SP + SAS WD + Q +C + H
Sbjct: 51 TGKIIHSIEQEDQEDITAFALSPDDEMLVSASRALLLRQWDWK--QQQCRRSWRAVHSVP 108
Query: 144 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNI-L 201
V S+++ LAT D ++ +W+V ++ Y C + V V FHP + L
Sbjct: 109 VASMSFDCTSTLLATGGCDGTIKLWDVIKQ--Y-CTHNLKGSSGVVHLVEFHPDISRLQL 165
Query: 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
S+S D ++++ D + + L+SH S V +LAF G L + D +W
Sbjct: 166 FSSSSDCAIRIW--DLRSSRCV--CVLESHYSPVTALAFSPDGHTLVSSGRDKICSVW 219
Score = 105 (42.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC 108
H V ++S++ T++++ G D I+LW ++ + G + + P
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLW---DVIKQYCTHNL--KGSSGVVHLVEFHPD 159
Query: 109 GNFIA--SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
+ + S+S D +WD RS + C LE H + V ++ +S +G L + RDK
Sbjct: 160 ISRLQLFSSSSDCAIRIWDLRSSR--CVCVLESHYSPVTALAFSPDGHTLVSSGRDKICS 217
Query: 167 VWEVGEE 173
VW++ E+
Sbjct: 218 VWDLQEQ 224
Score = 63 (27.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
R H + V V ++PV +L S S DG V++W I+
Sbjct: 523 RGHRRGVWSVQFSPV-DQILGSASADGSVRIWSIQ 556
Score = 58 (25.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 22/86 (25%), Positives = 38/86 (44%)
Query: 289 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 348
H R ++ + + + ++ +A D ++RI+ + F + T H+ V +
Sbjct: 525 HRRGVWSVQFSPVDQILGSASADGSVRIWS---------IQDFSCLKT-FEGHDASVLKI 574
Query: 349 AWNPVVPG-MLASCSDDGDVKLWQIK 373
+ V G L S DG VKLW IK
Sbjct: 575 IF--VSRGTQLVSSGSDGLVKLWTIK 598
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 228 (85.3 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 66/229 (28%), Positives = 118/229 (51%)
Query: 44 QTLKGHQGRVWNVSWN--PQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
++ + H V++V WN + T I+ D++I++W + T + H+ I
Sbjct: 98 KSFEEHTKEVYSVDWNLVTKDTFITGSW-DQSIKIWNPRMDRSLKTFRE-----HRYCIY 151
Query: 102 ETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATC 159
WSP + AS S D T +WD R + N T++ H++E+ + W+K N + + T
Sbjct: 152 SAIWSPRNAHLFASVSGDRTLKIWDSRDNR-SLN-TIKAHDHEILTCDWNKYNDKEVVTG 209
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKA 218
S DK++ +W++ D ++ H V++++ P +++LAS SYD +V ++ D+A
Sbjct: 210 SVDKTIRIWDIRYPDRP--TTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVW--DRA 265
Query: 219 -EADWINFATLKSHTSTVWSLAFDR-IGSRLATCSDDATVKIWKEYKPG 265
E D I A + HT V L ++ I ++A+CS D V +W +PG
Sbjct: 266 REQDPI-IARMDHHTEFVVGLDWNMFIDGQMASCSWDEQVCVWNLGRPG 313
Score = 150 (57.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 41/136 (30%), Positives = 64/136 (47%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
T+K H + WN G DK IR+W + ++ T IL GH +R
Sbjct: 185 TIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIR-YPDRPTT--ILR-GHTYAVRRI 240
Query: 104 AWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCS 160
SP + +AS S+D + VWD+ Q A ++ H V + W+ +GQ +A+CS
Sbjct: 241 KCSPHSESMLASCSYDMSVIVWDRAREQDPIIARMDHHTEFVVGLDWNMFIDGQ-MASCS 299
Query: 161 RDKSVWVWEVGEEDEY 176
D+ V VW +G ++
Sbjct: 300 WDEQVCVWNLGRPGQF 315
Score = 110 (43.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 42/165 (25%), Positives = 77/165 (46%)
Query: 102 ETAWSPCGN-FIASASFDATTAVWDKR--SGQFECNATLEGHENEVKSVTWS--KNGQFL 156
+ WS +AS+S D + +WD + SG + E H EV SV W+ F+
Sbjct: 63 DCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKS-FEEHTKEVYSVDWNLVTKDTFI 121
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKE 215
T S D+S+ +W + + H + + P + ++ AS S D T+K++
Sbjct: 122 -TGSWDQSIKIWNPRMDRSLK---TFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIW-- 175
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSR-LATCSDDATVKIW 259
D + +N T+K+H + + +++ + + T S D T++IW
Sbjct: 176 DSRDNRSLN--TIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIW 218
Score = 66 (28.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 300 HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359
H ++A+ D ++ ++ A + D + + +H H + V + WN + G +A
Sbjct: 245 HSESMLASCSYDMSVIVWDR---AREQDPI---IARMDH--HTEFVVGLDWNMFIDGQMA 296
Query: 360 SCSDDGDVKLWQI 372
SCS D V +W +
Sbjct: 297 SCSWDEQVCVWNL 309
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 241 (89.9 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 68/215 (31%), Positives = 100/215 (46%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L+GH G V++ + + + SC ED +IR W SF N +L GH + +
Sbjct: 338 LRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTN-----TVLYQGHAYPVWDLDI 392
Query: 106 SPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
SPC + ASAS D T +W R+ A GH +V V + N +LAT S DK+
Sbjct: 393 SPCSLYFASASHDRTARLWSFDRTYPLRIYA---GHLLDVDCVKFHPNSNYLATGSTDKT 449
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W + + + H V + F P LASA D +KL+ D A
Sbjct: 450 VRLWSTQQGNSVR---LFTGHRGPVLALAFSPNGKYLASAGEDQRLKLW--DLASGTL-- 502
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ L+ HT + SL F S +A+ S D +V++W
Sbjct: 503 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVW 537
Score = 191 (72.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 44/172 (25%), Positives = 85/172 (49%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N+ +GH VW++ +P +S D+ RLW SF + + + GH +
Sbjct: 376 NTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLW---SFDRTYPLR--IYAGHLLDVD 430
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ P N++A+ S D T +W + G T GH V ++ +S NG++LA+
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFT--GHRGPVLALAFSPNGKYLASAGE 488
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
D+ + +W++ Y+ + H ++ + F P +++ASAS D++V+++
Sbjct: 489 DQRLKLWDLASGTLYK---ELRGHTDNITSLTFSPDSSLIASASMDNSVRVW 537
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH V V ++P +++ DK +RLW + GN L GH+ + A+SP
Sbjct: 424 GHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQ-GNSVR----LFTGHRGPVLALAFSP 478
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G ++ASA D +WD SG L GH + + S+T+S + +A+ S D SV V
Sbjct: 479 NGKYLASAGEDQRLKLWDLASGTLY--KELRGHTDNITSLTFSPDSSLIASASMDNSVRV 536
Query: 168 WEV 170
W++
Sbjct: 537 WDI 539
Score = 149 (57.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 39/107 (36%), Positives = 58/107 (54%)
Query: 42 NSQTL-KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
NS L GH+G V ++++P G ++S GED+ ++LW S G + K + GH I
Sbjct: 459 NSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLAS-GTLY--KELR--GHTDNI 513
Query: 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV 147
+SP + IASAS D + VWD R+ CNA +G +E+ V
Sbjct: 514 TSLTFSPDSSLIASASMDNSVRVWDIRNTY--CNAPADGSSSELVGV 558
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 243 (90.6 bits), Expect = 8.7e-18, P = 8.7e-18
Identities = 67/222 (30%), Positives = 101/222 (45%)
Query: 12 DNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGED 71
D YLL + T L C ++ KGH VW+ ++P G S G D
Sbjct: 554 DRNYLLSSSEDGTVRLWSLQTFTC----LVG---YKGHNYPVWDTQFSPYGYYFVSGGHD 606
Query: 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131
+ RLW + + I + GH + T + P N++A+ S D T +WD +G
Sbjct: 607 RVARLWATDHY----QPLRIFA-GHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN- 660
Query: 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191
C GH+ + S+T+S NG+FLAT + D V +W++G + H V
Sbjct: 661 -CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG---LMVGELKGHTDTVCS 716
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKA--EADWINFATLKSH 231
+RF ILAS S D+TV+L+ KA + + +F T H
Sbjct: 717 LRFSRDGEILASGSMDNTVRLWDAVKAFEDVETDDFTTATGH 758
Score = 237 (88.5 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 64/218 (29%), Positives = 98/218 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH G V+ S++P + S ED +RLW ++F K GH + +T +
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK-----GHNYPVWDTQF 593
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
SP G + S D +W + ++ GH +V + N ++AT S D++V
Sbjct: 594 SPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTV 651
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+W+V + C + H + + F P LA+ + D V L+ D +
Sbjct: 652 RLWDVLNGN---CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW--DIGHG--LMV 704
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
LK HT TV SL F R G LA+ S D TV++W K
Sbjct: 705 GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 742
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 243 (90.6 bits), Expect = 8.7e-18, P = 8.7e-18
Identities = 67/222 (30%), Positives = 101/222 (45%)
Query: 12 DNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGED 71
D YLL + T L C ++ KGH VW+ ++P G S G D
Sbjct: 555 DRNYLLSSSEDGTVRLWSLQTFTC----LVG---YKGHNYPVWDTQFSPYGYYFVSGGHD 607
Query: 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131
+ RLW + + I + GH + T + P N++A+ S D T +WD +G
Sbjct: 608 RVARLWATDHY----QPLRIFA-GHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGN- 661
Query: 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191
C GH+ + S+T+S NG+FLAT + D V +W++G + H V
Sbjct: 662 -CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG---LMVGELKGHTDTVCS 717
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKA--EADWINFATLKSH 231
+RF ILAS S D+TV+L+ KA + + +F T H
Sbjct: 718 LRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGH 759
Score = 238 (88.8 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 64/218 (29%), Positives = 98/218 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH G V+ S++P + S ED +RLW ++F K GH + +T +
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK-----GHNYPVWDTQF 594
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
SP G + S D +W + ++ GH +V + N ++AT S D++V
Sbjct: 595 SPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTV 652
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+W+V + C + H + + F P LA+ + D V L+ D +
Sbjct: 653 RLWDVLNGN---CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW--DIGHG--LMV 705
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
LK HT TV SL F R G LA+ S D TV++W K
Sbjct: 706 GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 743
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 242 (90.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 67/222 (30%), Positives = 101/222 (45%)
Query: 12 DNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGED 71
D YLL + T L C ++ KGH VW+ ++P G S G D
Sbjct: 552 DRNYLLSSSEDGTVRLWSLQTFTC----LVG---YKGHNYPVWDTQFSPYGYYFVSGGHD 604
Query: 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131
+ RLW + + I + GH + T + P N++A+ S D T +WD +G
Sbjct: 605 RVARLWATDHY----QPLRIFA-GHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN- 658
Query: 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191
C GH+ + S+T+S NG+FLAT + D V +W++G + H V
Sbjct: 659 -CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG---LMVGELKGHTDTVCS 714
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKA--EADWINFATLKSH 231
+RF ILAS S D+TV+L+ KA + + +F T H
Sbjct: 715 LRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGH 756
Score = 237 (88.5 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 64/218 (29%), Positives = 98/218 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH G V+ S++P + S ED +RLW ++F K GH + +T +
Sbjct: 537 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK-----GHNYPVWDTQF 591
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
SP G + S D +W + ++ GH +V + N ++AT S D++V
Sbjct: 592 SPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTV 649
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+W+V + C + H + + F P LA+ + D V L+ D +
Sbjct: 650 RLWDVLNGN---CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW--DIGHG--LMV 702
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
LK HT TV SL F R G LA+ S D TV++W K
Sbjct: 703 GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIK 740
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 242 (90.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 67/222 (30%), Positives = 101/222 (45%)
Query: 12 DNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGED 71
D YLL + T L C ++ KGH VW+ ++P G S G D
Sbjct: 554 DRNYLLSSSEDGTVRLWSLQTFTC----LVG---YKGHNYPVWDTQFSPYGYYFVSGGHD 606
Query: 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131
+ RLW + + I + GH + T + P N++A+ S D T +WD +G
Sbjct: 607 RVARLWATDHY----QPLRIFA-GHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN- 660
Query: 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191
C GH+ + S+T+S NG+FLAT + D V +W++G + H V
Sbjct: 661 -CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG---LMVGELKGHTDTVCS 716
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKA--EADWINFATLKSH 231
+RF ILAS S D+TV+L+ KA + + +F T H
Sbjct: 717 LRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGH 758
Score = 237 (88.5 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 64/218 (29%), Positives = 98/218 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH G V+ S++P + S ED +RLW ++F K GH + +T +
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK-----GHNYPVWDTQF 593
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
SP G + S D +W + ++ GH +V + N ++AT S D++V
Sbjct: 594 SPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTV 651
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+W+V + C + H + + F P LA+ + D V L+ D +
Sbjct: 652 RLWDVLNGN---CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW--DIGHG--LMV 704
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
LK HT TV SL F R G LA+ S D TV++W K
Sbjct: 705 GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIK 742
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 242 (90.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 67/222 (30%), Positives = 101/222 (45%)
Query: 12 DNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGED 71
D YLL + T L C ++ KGH VW+ ++P G S G D
Sbjct: 555 DRNYLLSSSEDGTVRLWSLQTFTC----LVG---YKGHNYPVWDTQFSPYGYYFVSGGHD 607
Query: 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131
+ RLW + + I + GH + T + P N++A+ S D T +WD +G
Sbjct: 608 RVARLWATDHY----QPLRIFA-GHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN- 661
Query: 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191
C GH+ + S+T+S NG+FLAT + D V +W++G + H V
Sbjct: 662 -CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG---LMVGELKGHTDTVCS 717
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKA--EADWINFATLKSH 231
+RF ILAS S D+TV+L+ KA + + +F T H
Sbjct: 718 LRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGH 759
Score = 237 (88.5 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 64/218 (29%), Positives = 98/218 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH G V+ S++P + S ED +RLW ++F K GH + +T +
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK-----GHNYPVWDTQF 594
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
SP G + S D +W + ++ GH +V + N ++AT S D++V
Sbjct: 595 SPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTV 652
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+W+V + C + H + + F P LA+ + D V L+ D +
Sbjct: 653 RLWDVLNGN---CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW--DIGHG--LMV 705
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
LK HT TV SL F R G LA+ S D TV++W K
Sbjct: 706 GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 743
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 239 (89.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 65/210 (30%), Positives = 96/210 (45%)
Query: 12 DNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGED 71
D YLL + T L C ++ KGH VW+ ++P G S G D
Sbjct: 314 DRNYLLSSSEDGTVRLWSLQTFTC----LVG---YKGHNYPVWDTQFSPYGYYFVSGGHD 366
Query: 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131
+ RLW + + I + GH + T + P N++A+ S D T +WD +G
Sbjct: 367 RVARLWATDHY----QPLRIFA-GHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN- 420
Query: 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191
C GH+ + S+T+S NG+FLAT + D V +W++G + H V
Sbjct: 421 -CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG---LMVGELKGHTDTVCS 476
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKAEAD 221
+RF ILAS S D+TV+L+ KA D
Sbjct: 477 LRFSRDGEILASGSMDNTVRLWDAVKAFED 506
Score = 237 (88.5 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 64/218 (29%), Positives = 98/218 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH G V+ S++P + S ED +RLW ++F K GH + +T +
Sbjct: 299 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK-----GHNYPVWDTQF 353
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
SP G + S D +W + ++ GH +V + N ++AT S D++V
Sbjct: 354 SPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTV 411
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+W+V + C + H + + F P LA+ + D V L+ D +
Sbjct: 412 RLWDVLNGN---CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW--DIGHG--LMV 464
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
LK HT TV SL F R G LA+ S D TV++W K
Sbjct: 465 GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 502
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 233 (87.1 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 64/221 (28%), Positives = 104/221 (47%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH V V ++P G ++S DK I++WG ++ KF K I GH+ I + A
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWG--AYDGKFE-KTI--SGHKLGISDVA 121
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WS + S S D T VW+ +G+ TL+GH N V ++ + + S D+S
Sbjct: 122 WSSDSRLLVSGSDDKTLKVWELSTGK--SLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 179
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W+V +C + AH V V F+ +++ S+SYD +++ D A +
Sbjct: 180 VRIWDVRTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLK 234
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
+ V + F G + + D T+K+W +Y G
Sbjct: 235 -TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG 273
Score = 216 (81.1 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 50/174 (28%), Positives = 89/174 (51%)
Query: 86 FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK 145
+T K L+ GH + + +SP G ++AS+S D +W G+FE T+ GH+ +
Sbjct: 62 YTLKFTLA-GHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGIS 118
Query: 146 SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205
V WS + + L + S DK++ VWE+ + + H V F+P N++ S S
Sbjct: 119 DVAWSSDSRLLVSGSDDKTLKVWELSTGKSLK---TLKGHSNYVFCCNFNPQSNLIVSGS 175
Query: 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+D++V+++ + TL +H+ V ++ F+R GS + + S D +IW
Sbjct: 176 FDESVRIWDVRTGKC----LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 225
Score = 202 (76.2 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 56/220 (25%), Positives = 106/220 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+T+ GH+ + +V+W+ ++ S +DK +++W + S G K + GH +
Sbjct: 108 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVW-ELSTGKSL--KTL--KGHSNYVFCC 162
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++P N I S SFD + +WD R+G+ C TL H + V +V ++++G + + S D
Sbjct: 163 NFNPQSNLIVSGSFDESVRIWDVRTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 220
Query: 164 SVWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+W+ +C +I+ V V+F P + +A+ D+T+KL+ K +
Sbjct: 221 LCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-- 275
Query: 223 INFATLKSHTSTVWSLA--FDRIGSR-LATCSDDATVKIW 259
T H + + + F G + + + S+D V IW
Sbjct: 276 --LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIW 313
Score = 191 (72.3 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 60/225 (26%), Positives = 104/225 (46%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRE 102
+TLKGH V+ ++NPQ +I S D+++R+W T K + + H +
Sbjct: 150 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR------TGKCLKTLPAHSDPVSA 203
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSR 161
++ G+ I S+S+D +WD SGQ C TL +N V V +S NG+++ +
Sbjct: 204 VHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATL 261
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDK 217
D ++ +W+ + +C H ++ K F F + S S D+ V ++
Sbjct: 262 DNTLKLWDYSKG---KCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQS 317
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWK 260
E L+ HT TV A + +A+ + +D T+K+WK
Sbjct: 318 KEV----VQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWK 358
Score = 190 (71.9 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 54/178 (30%), Positives = 86/178 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL H V V +N G++I S D R+W S G K ++ D + +
Sbjct: 192 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP-PVSFV 247
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWS-KNGQFLATCS 160
+SP G +I +A+ D T +WD G+ C T GH+NE + +S G+++ + S
Sbjct: 248 KFSPNGKYILAATLDNTLKLWDYSKGK--CLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 305
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKED 216
D V++W + + E + H V HP +NI+ASA+ D T+KL+K D
Sbjct: 306 EDNMVYIWNLQSK---EVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKSD 360
>ZFIN|ZDB-GENE-030131-6689 [details] [associations]
symbol:seh1l "SEH1-like (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0051315 "attachment of spindle microtubules to kinetochore
involved in mitotic sister chromatid segregation" evidence=ISS]
[GO:0000776 "kinetochore" evidence=IEA;ISS] [GO:0007080 "mitotic
metaphase plate congression" evidence=ISS] [GO:0031080 "nuclear
pore outer ring" evidence=ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-6689 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0051028 GO:GO:0051315 GO:GO:0000777
GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 EMBL:BX294130 CTD:81929
KO:K14299 eggNOG:NOG257251 GeneTree:ENSGT00550000074999
HOGENOM:HOG000216896 EMBL:AY398414 IPI:IPI00499010
RefSeq:NP_956217.2 UniGene:Dr.20191 ProteinModelPortal:Q6TGU2
STRING:Q6TGU2 Ensembl:ENSDART00000013865 GeneID:334749
KEGG:dre:334749 InParanoid:Q6TGU2 NextBio:20810534
ArrayExpress:Q6TGU2 Bgee:Q6TGU2 Uniprot:Q6TGU2
Length = 364
Score = 185 (70.2 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 46/142 (32%), Positives = 76/142 (53%)
Query: 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190
F + H++ + V++ +G+ +ATCS D+SV VW+ G++ E+ C A H V
Sbjct: 2 FVAKSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKGDDGEWHCTASWKTHSGSVW 61
Query: 191 KVRF-HP-FDNILASASYDDTVKLFKE------DK--AEADWINFATLKSHTSTVWSLAF 240
+V + HP F +LAS S+D T +++E DK ++ WI TL ++V + F
Sbjct: 62 RVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVKF 121
Query: 241 --DRIGSRLATCSDDATVKIWK 260
+G L TCS D V+I++
Sbjct: 122 APKHMGLMLTTCSADGVVRIYE 143
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 53/190 (27%), Positives = 87/190 (45%)
Query: 186 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE-ADWINFATLKSHTSTVWSL--AFDR 242
I DV FH +A+ S D +VK++ DK + +W A+ K+H+ +VW + A
Sbjct: 15 IHDVS-YDFH--GRRMATCSSDQSVKVW--DKGDDGEWHCTASWKTHSGSVWRVTWAHPE 69
Query: 243 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC--H 300
G LA+CS D T +W+E G S S W TL ++ D+ + H
Sbjct: 70 FGQVLASCSFDRTAAVWEEIV-GESND--KQRGQSHWIKRTTLVDSR-TSVTDVKFAPKH 125
Query: 301 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP----VVPG 356
+ ++ T D +RI+ E P+ ++ + L H + +C++WNP P
Sbjct: 126 MGLMLTTCSADGVVRIY-EAPDV--MNLSQWSLQH--EISCKLACSCISWNPSSSRAHPP 180
Query: 357 MLASCSDDGD 366
M+A DD +
Sbjct: 181 MIAVGGDDSN 190
Score = 124 (48.7 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 38/135 (28%), Positives = 62/135 (45%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + +VS++ G +++C D+++++W K G + + H ++ W+ P
Sbjct: 11 HKDLIHDVSYDFHGRRMATCSSDQSVKVWDKGDDGEWHCTASWKT--HSGSVWRVTWAHP 68
Query: 108 -CGNFIASASFDATTAVW--------DKRSGQFEC--NATLEGHENEVKSVTWSKN--GQ 154
G +AS SFD T AVW DK+ GQ TL V V ++ G
Sbjct: 69 EFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVKFAPKHMGL 128
Query: 155 FLATCSRDKSVWVWE 169
L TCS D V ++E
Sbjct: 129 MLTTCSADGVVRIYE 143
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 37/146 (25%), Positives = 66/146 (45%)
Query: 231 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290
H + +++D G R+ATCS D +VK+W + +D W C + H G
Sbjct: 11 HKDLIHDVSYDFHGRRMATCSSDQSVKVWDK------------GDDGEWHCTASWKTHSG 58
Query: 291 RTIYDISWCH--LTDLIATACGDDAIRIFKENP-EAGDSDM-VSFDLVHTEHRAHNQDVN 346
+++ ++W H ++A+ D +++E E+ D S + T V
Sbjct: 59 -SVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVT 117
Query: 347 CVAWNPVVPG-MLASCSDDGDVKLWQ 371
V + P G ML +CS DG V++++
Sbjct: 118 DVKFAPKHMGLMLTTCSADGVVRIYE 143
Score = 92 (37.4 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 304 LIATACGDDAIRIFKENP----EAGDSDMVSFDL-VHTEHRAHNQDVNCVAWNPVVPGML 358
++A A D +RIFK P A S F++ V + +HN V V+WN + +L
Sbjct: 237 VLAIATKD--VRIFKLLPLRRESANSSGPTKFEVQVMAQFDSHNSQVWRVSWN-ITSTLL 293
Query: 359 ASCSDDGDVKLWQ 371
AS DDG V+LW+
Sbjct: 294 ASSGDDGCVRLWK 306
Score = 81 (33.6 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 48/209 (22%), Positives = 86/209 (41%)
Query: 136 TLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGE---------EDEYECAAVINA 184
TL V V ++ G L TCS D V ++E + + E C +
Sbjct: 108 TLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLACSC 167
Query: 185 HIQDVKKVRFHP----FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240
+ R HP ++ +Y V++ + ++ + TL + T V +AF
Sbjct: 168 ISWNPSSSRAHPPMIAVGGDDSNGAYSGKVQIHEYNENTRKYAKAETLMTVTDPVHDIAF 227
Query: 241 -DRIGSR---LATCSDDATVKIWK----EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 292
+G LA + D V+I+K + NS+G PT V + H+ +
Sbjct: 228 APNLGRSFHVLAIATKD--VRIFKLLPLRRESANSSG-PTKFEVQV---MAQFDSHNSQ- 280
Query: 293 IYDISWCHLTDLIATACGDDA-IRIFKEN 320
++ +SW ++T + + GDD +R++K N
Sbjct: 281 VWRVSW-NITSTLLASSGDDGCVRLWKAN 308
Score = 76 (31.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 47 KGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLW 77
K H G VW V+W +P+ G +++SC D+ +W
Sbjct: 54 KTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVW 86
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 226 (84.6 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 69/221 (31%), Positives = 107/221 (48%)
Query: 45 TLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFG--NKFTAKAILSDGHQRTIR 101
TL+GH G V +++ P ++ S DK + W K + G N++ GH ++
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKW-KLTGGEDNQYGIPKKSFKGHSHIVQ 70
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ S G + SAS+D T +WD +G E GH+ +V SV+ +KN + + + SR
Sbjct: 71 DVTISADGAYALSASWDRTLRLWDLETG--ETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 162 DKSVWVWE-VGEEDEYECAAVINAHIQDVKKVRFHPFD--NILASASYDDTVKLFKEDKA 218
DK+V VW +GE C A + H V VR P D + + SAS+D TVK + D A
Sbjct: 129 DKTVKVWNTIGE-----CMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSW--DLA 181
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ +N A HT + + GS A+ D + +W
Sbjct: 182 DYS-VN-ADFIGHTGYISCITLSPDGSLCASAGKDGVIILW 220
Score = 157 (60.3 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 58/229 (25%), Positives = 97/229 (42%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+Q GH+G V +VS I S DK +++W + G A L+ GH +
Sbjct: 101 TQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWN--TIGE---CMATLT-GHNDWVSA 154
Query: 103 TAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS 160
SP + + SAS+D T WD + NA GH + +T S +G A+
Sbjct: 155 VRISPSDQSSTVISASWDKTVKSWDL--ADYSVNADFIGHTGYISCITLSPDGSLCASAG 212
Query: 161 RDKSVWVWEVGEEDE-YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK-EDKA 218
+D + +W++ + Y A H + F P LA+A+ +K+FK ++++
Sbjct: 213 KDGVIILWDLNKNKTLYTLEAKAEVHA-----LAFSPNRYWLAAATTSG-IKIFKLQERS 266
Query: 219 EADWIN--FAT-LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
D + FA + SLA+ G L D +++W+ P
Sbjct: 267 LLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDNVIRVWQVMTP 315
Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 66/248 (26%), Positives = 110/248 (44%)
Query: 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
I ++ KGH V +V+ + G S D+ +RLW E+ + T + + GH+ +
Sbjct: 57 IPKKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLET--GETTQRFV---GHKGDV 111
Query: 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF--LAT 158
+ + I SAS D T VW+ EC ATL GH + V +V S + Q + +
Sbjct: 112 LSVSIAKNLRQIVSASRDKTVKVWNTIG---ECMATLTGHNDWVSAVRISPSDQSSTVIS 168
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
S DK+V W++ + Y A H + + P ++ ASA D + L+ +K
Sbjct: 169 ASWDKTVKSWDLAD---YSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKN 225
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK--------EYKPGNSAGI 270
+ + TL++ V +LAF LA + +KI+K E KP + G
Sbjct: 226 KTLY----TLEAKAE-VHALAFSPNRYWLAAATTSG-IKIFKLQERSLLDELKPEFAVGA 279
Query: 271 PTPDNDSV 278
D +++
Sbjct: 280 TAKDPEAI 287
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 226 (84.6 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 69/221 (31%), Positives = 107/221 (48%)
Query: 45 TLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFG--NKFTAKAILSDGHQRTIR 101
TL+GH G V +++ P ++ S DK + W K + G N++ GH ++
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKW-KLTGGEDNQYGIPKKSFKGHSHIVQ 70
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ S G + SAS+D T +WD +G E GH+ +V SV+ +KN + + + SR
Sbjct: 71 DVTISADGAYALSASWDRTLRLWDLETG--ETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 162 DKSVWVWE-VGEEDEYECAAVINAHIQDVKKVRFHPFD--NILASASYDDTVKLFKEDKA 218
DK+V VW +GE C A + H V VR P D + + SAS+D TVK + D A
Sbjct: 129 DKTVKVWNTIGE-----CMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSW--DLA 181
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ +N A HT + + GS A+ D + +W
Sbjct: 182 DYS-VN-ADFIGHTGYISCITLSPDGSLCASAGKDGVIILW 220
Score = 157 (60.3 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 58/229 (25%), Positives = 97/229 (42%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+Q GH+G V +VS I S DK +++W + G A L+ GH +
Sbjct: 101 TQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWN--TIGE---CMATLT-GHNDWVSA 154
Query: 103 TAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS 160
SP + + SAS+D T WD + NA GH + +T S +G A+
Sbjct: 155 VRISPSDQSSTVISASWDKTVKSWDL--ADYSVNADFIGHTGYISCITLSPDGSLCASAG 212
Query: 161 RDKSVWVWEVGEEDE-YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK-EDKA 218
+D + +W++ + Y A H + F P LA+A+ +K+FK ++++
Sbjct: 213 KDGVIILWDLNKNKTLYTLEAKAEVHA-----LAFSPNRYWLAAATTSG-IKIFKLQERS 266
Query: 219 EADWIN--FAT-LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
D + FA + SLA+ G L D +++W+ P
Sbjct: 267 LLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDNVIRVWQVMTP 315
Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 66/248 (26%), Positives = 110/248 (44%)
Query: 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
I ++ KGH V +V+ + G S D+ +RLW E+ + T + + GH+ +
Sbjct: 57 IPKKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLET--GETTQRFV---GHKGDV 111
Query: 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF--LAT 158
+ + I SAS D T VW+ EC ATL GH + V +V S + Q + +
Sbjct: 112 LSVSIAKNLRQIVSASRDKTVKVWNTIG---ECMATLTGHNDWVSAVRISPSDQSSTVIS 168
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
S DK+V W++ + Y A H + + P ++ ASA D + L+ +K
Sbjct: 169 ASWDKTVKSWDLAD---YSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKN 225
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK--------EYKPGNSAGI 270
+ + TL++ V +LAF LA + +KI+K E KP + G
Sbjct: 226 KTLY----TLEAKAE-VHALAFSPNRYWLAAATTSG-IKIFKLQERSLLDELKPEFAVGA 279
Query: 271 PTPDNDSV 278
D +++
Sbjct: 280 TAKDPEAI 287
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 237 (88.5 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 71/226 (31%), Positives = 107/226 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 268 ASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 322
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W F AS S D V R G T +GH NEV ++ W +G LA+CS D
Sbjct: 323 VDWQNNTTF-ASCSTDMCIHVC--RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 379
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRF--------HPFDNI-LASASYDDTVKLF 213
++ +W + ++ C + AH +++ +++ +P NI LASAS+D TV+L+
Sbjct: 380 MTLKIWSMKQDT---CVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLW 436
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D+ + TL H V+S+AF G LA+ S D V IW
Sbjct: 437 DVDRG----VCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 478
Score = 205 (77.2 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 58/228 (25%), Positives = 102/228 (44%)
Query: 42 NSQT-LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL-----SDG 95
N T L+GH+ V+ +WNP +++S D R+W N + + +L G
Sbjct: 169 NKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGG 228
Query: 96 HQ----RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK 151
H + + W+ G +A+ S+D +W + G +TL H+ + ++ W+K
Sbjct: 229 HDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTE-DGNLA--STLGQHKGPIFALKWNK 285
Query: 152 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVK 211
G ++ + DK+ +W+ + + +A DV F AS S D +
Sbjct: 286 KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF----ASCSTDMCIH 341
Query: 212 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ + D T + HT+ V ++ +D G LA+CSDD T+KIW
Sbjct: 342 VCR---LGCDR-PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 385
Score = 119 (46.9 bits), Expect = 0.00042, P = 0.00042
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 46 LKGHQGRVWNVSWNPQGT---------MISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
L+ H ++ + W+P G M++S D +RLW + + L+ H
Sbjct: 396 LQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVD----RGVCIHTLTK-H 450
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
Q + A+SP G ++AS SFD +W+ +SG + G + V W+ G +
Sbjct: 451 QEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSYRGTGG---IFEVCWNARGDKV 507
Query: 157 ATCSRDKSVWVWEV 170
+ D SV V ++
Sbjct: 508 GASASDGSVCVLDL 521
Score = 90 (36.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 339 RAHNQDVNCVAWNPVVPGML-ASCSDDGDVKLWQIK 373
+ H +VN + W+P GML ASCSDD +K+W +K
Sbjct: 355 QGHTNEVNAIKWDP--SGMLLASCSDDMTLKIWSMK 388
Score = 76 (31.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 224 NFAT-LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282
N AT L+ H S V+ A++ + LA+ S D+T +IW + NS + C+
Sbjct: 169 NKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLV----LRHCI 224
Query: 283 CTLSGHH---GRTIYDISWCHLTDLIATACGDDAIRIFKEN 320
GH + + + W L+AT D RI+ E+
Sbjct: 225 RE-GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTED 264
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 238 (88.8 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 71/225 (31%), Positives = 102/225 (45%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+ L GH G V++ + P + + SC ED +IR W ESF N +L GH + +
Sbjct: 333 KVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTN-----TVLYQGHAYPVWDL 387
Query: 104 AWSPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
SP F ASAS+D T +W R+ A GH V V + N +LAT S D
Sbjct: 388 DISPHSLFFASASYDHTARLWSFDRTYPLRIYA---GHLAGVDCVKFHPNSNYLATGSTD 444
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
K+V +W + + + H V+ + F P L SA D +KL+ D A
Sbjct: 445 KTVRLWSAQQGNSVR---LFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLW--DLASGTL 499
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 267
+ L HT + S+ F S +A+ S D +V+IW NS
Sbjct: 500 --YKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNS 542
Score = 200 (75.5 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 58/213 (27%), Positives = 101/213 (47%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N+ +GH VW++ +P +S D RLW SF + + + GH +
Sbjct: 373 NTVLYQGHAYPVWDLDISPHSLFFASASYDHTARLW---SFDRTYPLR--IYAGHLAGVD 427
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ P N++A+ S D T +W + G T GH V+ + +S NGQ+L +
Sbjct: 428 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT--GHCGPVRCLAFSPNGQYLVSAGE 485
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF----KEDK 217
D+ + +W++ Y+ ++ H D+ V F +++ASAS D++V+++ K +
Sbjct: 486 DQLLKLWDLASGTLYKD---LHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNS 542
Query: 218 AEADWINFATLKSHT---STVWSLAFDRIGSRL 247
AD + L +T STV ++ F GSRL
Sbjct: 543 TPADGSSSELLGVYTGQMSTVLNVQF-MAGSRL 574
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 226 (84.6 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 67/213 (31%), Positives = 102/213 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+ V V ++P G +++S DK + LW G KA H T+R +
Sbjct: 58 LVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKA-----HTATVRSVHF 112
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
S G + +AS D T VW +F + L H N V+ +S +G+ +A+ S DK+V
Sbjct: 113 SSDGQSLVTASDDKTIKVWTVHRQKFLFS--LSQHINWVRCARFSPDGRLIASASDDKTV 170
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+W+ + EC H V FHP +A+A D TVK++ D +
Sbjct: 171 KLWD---KTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVW--DVRMNRLLQH 225
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
+ HT+ V SL+F G+ L T S+D+T+KI
Sbjct: 226 YQV--HTAAVNSLSFHPSGNYLITASNDSTLKI 256
Score = 223 (83.6 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 69/218 (31%), Positives = 95/218 (43%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S K H V +V ++ G + + +DK I++W KF LS H +R
Sbjct: 97 STVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHR--QKFLFS--LSQ-HINWVRC 151
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G IASAS D T +WDK S EC + H V + +G +A D
Sbjct: 152 ARFSPDGRLIASASDDKTVKLWDKTSR--ECIHSFCEHGGFANHVEFHPSGTCIAAAGTD 209
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
K+V VW+V + V H V + FHP N L +AS D T+K+ D E
Sbjct: 210 KTVKVWDVRMNRLLQHYQV---HTAAVNSLSFHPSGNYLITASNDSTLKIL--DLLEGRL 264
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
+ TL H +AF R G A+ D V +WK
Sbjct: 265 LY--TLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWK 300
Score = 219 (82.2 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 63/213 (29%), Positives = 106/213 (49%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
+GH+ + +V ++ ++S D +++W S + A ++ GH+ + +S
Sbjct: 17 RGHRDAITSVDFSLNKKQLASGSMDSCLKIW---SMKPQMRAYCLV--GHKDAVMCVQFS 71
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
P G+ +AS S D T +W S + E + + H V+SV +S +GQ L T S DK++
Sbjct: 72 PSGHLVASGSRDKTVCLWVP-SVKGE-STVFKAHTATVRSVHFSSDGQSLVTASDDKTIK 129
Query: 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA 226
VW V + + ++ HI V+ RF P ++ASAS D TVKL+ DK + I+
Sbjct: 130 VWTVHRQ---KFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLW--DKTSRECIH-- 182
Query: 227 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ H + F G+ +A D TVK+W
Sbjct: 183 SFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVW 215
Score = 159 (61.0 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 42/126 (33%), Positives = 64/126 (50%)
Query: 139 GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198
GH + + SV +S N + LA+ S D + +W + + C H V V+F P
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLV---GHKDAVMCVQFSPSG 74
Query: 199 NILASASYDDTVKLFKED-KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257
+++AS S D TV L+ K E+ K+HT+TV S+ F G L T SDD T+K
Sbjct: 75 HLVASGSRDKTVCLWVPSVKGES-----TVFKAHTATVRSVHFSSDGQSLVTASDDKTIK 129
Query: 258 IWKEYK 263
+W ++
Sbjct: 130 VWTVHR 135
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 38/138 (27%), Positives = 66/138 (47%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC 108
H G +V ++P GT I++ G DK +++W N+ + H + ++ P
Sbjct: 187 HGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRM--NRLLQHYQV---HTAAVNSLSFHPS 241
Query: 109 GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168
GN++ +AS D+T + D G+ TL GH+ V +S+ G F A+ D+ V VW
Sbjct: 242 GNYLITASNDSTLKILDLLEGRLLY--TLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Query: 169 EVG-EEDEYECAAVINAH 185
+ +Y+ V+ H
Sbjct: 300 KTNFSAADYD--GVLKTH 315
>UNIPROTKB|A8XJ40 [details] [associations]
symbol:npp-20 "Protein SEC13 homolog" species:6238
"Caenorhabditis briggsae" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643 GO:GO:0000910
GO:GO:0051028 HOGENOM:HOG000216895 EMBL:HE601467
ProteinModelPortal:A8XJ40 STRING:A8XJ40 EnsemblMetazoa:CBG13889
WormBase:CBG13889 Uniprot:A8XJ40
Length = 306
Score = 222 (83.2 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 66/249 (26%), Positives = 118/249 (47%)
Query: 46 LKGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
L GH G VW VSW +P+ G +++S DK + +W +E G K + H+ ++
Sbjct: 54 LSGHNGPVWKVSWAHPKYGGLLASASYDKKVIIW-QEVNGR--WQKTYEWETHEASVTSV 110
Query: 104 AWSP--CGNFIASASFDATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKN-----GQ 154
A++P G +AS+S D T + +D ++ Q++ + H+ V SV+W+ G+
Sbjct: 111 AFAPHQFGLMLASSSADGTIGILRFDAQTQQWQSSRIQNCHDQGVNSVSWAPGTADPAGK 170
Query: 155 F-LATCSRDKSVWVWEVGEE-DEYECAAVINAHIQDVKKVRFHPFDN----ILASASYDD 208
+ DK V +W + EE +E+ C I+ H V++ + P N + S D
Sbjct: 171 KRFVSAGNDKLVKIWLLNEELNEWTCEKAIHCHKDFVREAAWCPVTNKGQHSIVSCGLDG 230
Query: 209 TVKLFK-EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 267
+ L++ D A+W + L+ ++ +F GS L+ DD + +W+E G
Sbjct: 231 NLVLYRIADIETAEWKS-KLLEQAPCALYHASFSPCGSFLSVSGDDNMITLWRENLQGQW 289
Query: 268 AGIPTPDND 276
IP + +
Sbjct: 290 IKIPRENKE 298
Score = 161 (61.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 61/287 (21%), Positives = 125/287 (43%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + + N G +++CG D+ ++++ G + I GH + + +W+ P
Sbjct: 12 HRDAIHDAQLNIYGNRLATCGSDRLVKIFEVRPNGQSYPL--IELSGHNGPVWKVSWAHP 69
Query: 108 -CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKS 164
G +ASAS+D +W + +G+++ E HE V SV ++ + G LA+ S D +
Sbjct: 70 KYGGLLASASYDKKVIIWQEVNGRWQKTYEWETHEASVTSVAFAPHQFGLMLASSSADGT 129
Query: 165 VWVWEV-GEEDEYECAAVINAHIQDVKKVRFHP--FDNI----LASASYDDTVKLFKEDK 217
+ + + +++ + + N H Q V V + P D SA D VK++ ++
Sbjct: 130 IGILRFDAQTQQWQSSRIQNCHDQGVNSVSWAPGTADPAGKKRFVSAGNDKLVKIWLLNE 189
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSR----LATCSDDATVKIWKEYKPGNSAGIPTP 273
+W + H V A+ + ++ + +C D + +++ A I T
Sbjct: 190 ELNEWTCEKAIHCHKDFVREAAWCPVTNKGQHSIVSCGLDGNLVLYR------IADIETA 243
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320
+ WK L +Y S+ ++ + D+ I +++EN
Sbjct: 244 E----WKS--KLLEQAPCALYHASFSPCGSFLSVSGDDNMITLWREN 284
Score = 139 (54.0 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 64/246 (26%), Positives = 105/246 (42%)
Query: 140 HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF-HP-F 197
H + + + G LATC D+ V ++EV + ++ H V KV + HP +
Sbjct: 12 HRDAIHDAQLNIYGNRLATCGSDRLVKIFEVRPNGQSYPLIELSGHNGPVWKVSWAHPKY 71
Query: 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF--DRIGSRLATCSDDAT 255
+LASASYD V +++E W ++H ++V S+AF + G LA+ S D T
Sbjct: 72 GGLLASASYDKKVIIWQE--VNGRWQKTYEWETHEASVTSVAFAPHQFGLMLASSSADGT 129
Query: 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-D-----LIATAC 309
+ I + A + + C H + + +SW T D +A
Sbjct: 130 IGILRF-----DAQTQQWQSSRIQNC-------HDQGVNSVSWAPGTADPAGKKRFVSAG 177
Query: 310 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGM--LASCSDDGD 366
D ++I+ N E ++ +H H V AW PV G + SC DG+
Sbjct: 178 NDKLVKIWLLNEEL--NEWTCEKAIH----CHKDFVREAAWCPVTNKGQHSIVSCGLDGN 231
Query: 367 VKLWQI 372
+ L++I
Sbjct: 232 LVLYRI 237
>UNIPROTKB|F1PDM3 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AAEX03012077 RefSeq:XP_850437.1 ProteinModelPortal:F1PDM3
Ensembl:ENSCAFT00000008242 GeneID:607653 KEGG:cfa:607653
NextBio:20893365 Uniprot:F1PDM3
Length = 322
Score = 226 (84.6 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 78/300 (26%), Positives = 139/300 (46%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + + + GT +++C D++++++ + G A GH+ + + AW+ P
Sbjct: 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL---RGHEGPVWQVAWAHP 68
Query: 108 C-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKS 164
GN +AS S+D +W + +G +E GH++ V SV W+ + G LA S D +
Sbjct: 69 MYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGA 128
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-------FD-------NIL---ASASYD 207
+ + E ++E + NAH V + P D N + AS D
Sbjct: 129 ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCD 188
Query: 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAF-DRIG---SRLATCSDDATVKIWK-EY 262
+ +KL+KE++ + W L++H+ V +A+ IG S +A+CS D V IW +
Sbjct: 189 NLIKLWKEEE-DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247
Query: 263 KPGN--SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320
GN S + ND VW H +SW +++A + GD+ + ++KE+
Sbjct: 248 TSGNTWSPKLLHKFNDVVW--------H-------VSWSITANILAVSGGDNKVTLWKES 292
Score = 142 (55.0 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 68/252 (26%), Positives = 104/252 (41%)
Query: 134 NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193
N HE+ + G LATCS D+SV +++V + A + H V +V
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI-LIADLRGHEGPVWQVA 64
Query: 194 F-HP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF--DRIGSRLAT 249
+ HP + NILAS SYD V ++KE+ W H S+V S+ + G LA
Sbjct: 65 WAHPMYGNILASCSYDRKVIIWKEENGT--WEKTHEHTGHDSSVNSVCWAPHDYGLILAC 122
Query: 250 CSDDATVKI--------WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 301
S D + + W+ K N+ I N W + G ++
Sbjct: 123 GSSDGAISLLTYTGEGQWEVKKINNAHTIGC--NAVSW-APAVVPGSLIDQPSGQKPNYI 179
Query: 302 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV--P-GML 358
+ C D+ I+++KE + + + AH+ V VAW P + P +
Sbjct: 180 KKFASGGC-DNLIKLWKEEEDGQWKEEQKLE-------AHSDWVRDVAWAPSIGLPTSTI 231
Query: 359 ASCSDDGDVKLW 370
ASCS DG V +W
Sbjct: 232 ASCSQDGRVFIW 243
Score = 132 (51.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 46 LKGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
L+GH+G VW V+W +P G +++SC D+ + +W +E N K GH ++
Sbjct: 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEE---NGTWEKTHEHTGHDSSVNSV 109
Query: 104 AWSP--CGNFIASASFD-ATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150
W+P G +A S D A + + GQ+E H +V+W+
Sbjct: 110 CWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWA 159
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 66 SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-G---NFIASASFDATT 121
+S G D I+LW +E G + + + H +R+ AW+P G + IAS S D
Sbjct: 183 ASGGCDNLIKLWKEEEDGQWKEEQKL--EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240
Query: 122 AVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179
+W D SG L + V V+WS LA D V +W+ + ++ C
Sbjct: 241 FIWTCDDTSGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI 300
Query: 180 AVIN 183
+ +N
Sbjct: 301 SDVN 304
Score = 81 (33.6 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 25/108 (23%), Positives = 46/108 (42%)
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI----LASASYDDTVKLFKEDK 217
D + +W+ E+ +++ + AH V+ V + P + +AS S D V ++ D
Sbjct: 188 DNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
+ + L VW +++ + LA D V +WKE G
Sbjct: 248 TSGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDG 295
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 234 (87.4 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 67/219 (30%), Positives = 105/219 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L+GH RV V+++P G + S D RLW + G + ++ +GH I A
Sbjct: 261 LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHT-G----VELLMQEGHSEGIFSIAC 315
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
P G+ ++S DA +WD RSG+ L+ H ++ ++ WS NG LAT S D +V
Sbjct: 316 QPDGSLVSSGGNDAIGRIWDLRSGK--SIMVLDEHIRQIVAMAWSPNGYQLATSSADDTV 373
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRF--HPFDNILASASYDDTVKLFKEDKAEADWI 223
+W++ + A I AH V VR+ + +A++ YD VKL+ +
Sbjct: 374 KIWDLRK---VSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNP-------L 423
Query: 224 NFATLKS---HTSTVWSLAFDRIGSRLATCSDDATVKIW 259
N + +KS H V S+ D G R + D T+K+W
Sbjct: 424 NCSLIKSMVGHEEKVMSV--DGYGDRFISSGYDRTIKLW 460
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 60/228 (26%), Positives = 106/228 (46%)
Query: 44 QTLKGHQGRVWNVSWNP---------QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
Q +GH RV + W P + +++ D + LW K S + +
Sbjct: 208 QLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLW-KASQSTPL----LRLE 262
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH + A+ P G+++ SASFD T +WD +G E EGH + S+ +G
Sbjct: 263 GHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTG-VEL-LMQEGHSEGIFSIACQPDGS 320
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
+++ D +W++ + V++ HI+ + + + P LA++S DDTVK++
Sbjct: 321 LVSSGGNDAIGRIWDLRSG---KSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWD 377
Query: 215 EDKAEADWINFA-TLKSHTSTVWSLAFDRIG-SR-LATCSDDATVKIW 259
K ++ A T+ +H+S V + + G +R +AT D VK+W
Sbjct: 378 LRK-----VSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLW 420
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 61/262 (23%), Positives = 110/262 (41%)
Query: 21 IPSTEN-LTGTNLIL-CSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG 78
IP E L+G + I + E++ SQ G + + V ++ G +S +++W
Sbjct: 143 IPVPEIVLSGKSSIEHLQKAELMGSQI--GGERPIAIVRFSNNGNHFASGSWGGQVKVWN 200
Query: 79 KESFGNKFTAKAILSDGHQRTIRETAWSP-CGNF--------IASASFDATTAVWDKRSG 129
++ ++ L GH + W P C + +A+ + D T +W ++
Sbjct: 201 SDNL-----SEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLW--KAS 253
Query: 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 189
Q LEGH V V + +G +L + S D + +W+V E + H + +
Sbjct: 254 QSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVEL---LMQEGHSEGI 310
Query: 190 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 249
+ P D L S+ +D + + ++ + L H + ++A+ G +LAT
Sbjct: 311 FSIACQP-DGSLVSSGGNDAIGRIWDLRSGK---SIMVLDEHIRQIVAMAWSPNGYQLAT 366
Query: 250 CSDDATVKIWKEYKPGNSAGIP 271
S D TVKIW K + IP
Sbjct: 367 SSADDTVKIWDLRKVSLAHTIP 388
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 236 (88.1 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 65/221 (29%), Positives = 101/221 (45%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S L H G V+ +++P + SC ED + RLW S K TA + GH + +
Sbjct: 372 SVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLW---SVDTK-TA-LVAYKGHTGPVWD 426
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
A+ P G++ A+AS D T +W GH ++V VT+ N ++ T S D
Sbjct: 427 VAFGPFGHYFATASHDQTAQLWS--CDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSD 484
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
K+ +W+V V N H Q V V P + +ASA + + L+ D
Sbjct: 485 KTCRLWDVHRGHSVR---VFNGHTQPVTAVAIAPDGHTMASADSEGLIHLW--DIGTGRR 539
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
I T++ H ++SL+F R + L + D TV+ W +K
Sbjct: 540 IK--TMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFK 578
Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 52/211 (24%), Positives = 87/211 (41%)
Query: 58 WNPQGTMISSCG-EDKNIRLWGKESFGNKFTAKAIL--SDG------HQRTIRETAWSPC 108
++P TMI+ CG ++ IRLW ++ + SDG H + T +SP
Sbjct: 332 FSPDSTMIA-CGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPD 390
Query: 109 GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168
++ S S DA+ +W + +GH V V + G + AT S D++ +W
Sbjct: 391 NKYLLSCSEDASARLWSVDTKT--ALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLW 448
Query: 169 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL 228
D V H+ DV V FHP + + S D T +L+ + +
Sbjct: 449 SC---DHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHS----VRVF 501
Query: 229 KSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
HT V ++A G +A+ + + +W
Sbjct: 502 NGHTQPVTAVAIAPDGHTMASADSEGLIHLW 532
Score = 146 (56.5 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 51/253 (20%), Positives = 102/253 (40%)
Query: 12 DNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGED 71
DN+YLL + ++ L + ++ ++ KGH G VW+V++ P G ++ D
Sbjct: 390 DNKYLLSCSEDASARLWSVD----TKTALV---AYKGHTGPVWDVAFGPFGHYFATASHD 442
Query: 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131
+ +LW S + + + GH + + P ++ + S D T +WD G
Sbjct: 443 QTAQLW---SCDHIYPLRVFA--GHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHS 497
Query: 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191
GH V +V + +G +A+ + + +W++G + + H ++
Sbjct: 498 V--RVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIK---TMRGHRGNIYS 552
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251
+ F +L S D TV+ + K + ++L T +S + S
Sbjct: 553 LSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSLTGSVVTPFSAKTSTFNEVNWSTS 612
Query: 252 DDATVKIWKEYKP 264
D V ++ + P
Sbjct: 613 PDQMVALYTKQTP 625
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 235 (87.8 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 76/253 (30%), Positives = 116/253 (45%)
Query: 23 STENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESF 82
ST N G ++ S+ E + +L GH V+ VS +PQ I SC ED RLW K++
Sbjct: 378 STNN--GPQPLVGSQNEPLQKSSLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDT- 434
Query: 83 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHE 141
K T + GH I + +SP G + A+AS D T +WD + + GH+
Sbjct: 435 --KSTI--VKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLR---VFVGHQ 487
Query: 142 NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201
N+V V++ N +LAT S D + +W+V V NAH V + L
Sbjct: 488 NDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVR---VFNAHHSPVSALCMSADGLSL 544
Query: 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK- 260
ASA +K++ + ++ ++F H+S V+SL+F L + D V W
Sbjct: 545 ASADESGIIKVW-DLRSSNQHVSFV---KHSSIVYSLSFSYDNKILVSGGADTDVNFWDL 600
Query: 261 EYKPGNSAGIPTP 273
Y+ S G +P
Sbjct: 601 TYRNNLSDGEQSP 613
>MGI|MGI:99832 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=ISO] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:99832 GO:GO:0012507 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OMA:IKLWKEE OrthoDB:EOG40P471
EMBL:AK003354 EMBL:AK009755 EMBL:BC002128 IPI:IPI00133920
RefSeq:NP_077168.2 UniGene:Mm.29296 ProteinModelPortal:Q9D1M0
SMR:Q9D1M0 IntAct:Q9D1M0 STRING:Q9D1M0 PhosphoSite:Q9D1M0
REPRODUCTION-2DPAGE:Q9D1M0 PaxDb:Q9D1M0 PRIDE:Q9D1M0 DNASU:110379
Ensembl:ENSMUST00000032440 GeneID:110379 KEGG:mmu:110379
UCSC:uc009dhm.1 InParanoid:Q9D1M0 NextBio:363887 Bgee:Q9D1M0
CleanEx:MM_SEC13 Genevestigator:Q9D1M0
GermOnline:ENSMUSG00000030298 Uniprot:Q9D1M0
Length = 322
Score = 224 (83.9 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 77/300 (25%), Positives = 139/300 (46%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + + + GT +++C D++++++ + G A GH+ + + AW+ P
Sbjct: 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL---RGHEGPVWQVAWAHP 68
Query: 108 C-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKS 164
GN +AS S+D +W + +G +E GH++ V SV W+ + G LA S D +
Sbjct: 69 MYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGA 128
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-------FD-------NIL---ASASYD 207
+ + E ++E + NAH V + P D N + AS D
Sbjct: 129 ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCD 188
Query: 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAF-DRIG---SRLATCSDDATVKIWK-EY 262
+ +KL++E++ + W L++H+ V +A+ IG S +A+CS D V IW +
Sbjct: 189 NLIKLWREEE-DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247
Query: 263 KPGN--SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320
GN S + ND VW H +SW +++A + GD+ + ++KE+
Sbjct: 248 ASGNMWSPKLLHKFNDVVW--------H-------VSWSITANILAVSGGDNKVTLWKES 292
Score = 140 (54.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 67/252 (26%), Positives = 104/252 (41%)
Query: 134 NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193
N HE+ + G LATCS D+SV +++V + A + H V +V
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI-LIADLRGHEGPVWQVA 64
Query: 194 F-HP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF--DRIGSRLAT 249
+ HP + NILAS SYD V ++KE+ W H S+V S+ + G LA
Sbjct: 65 WAHPMYGNILASCSYDRKVIIWKEENGT--WEKTHEHSGHDSSVNSVCWAPHDYGLILAC 122
Query: 250 CSDDATVKI--------WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 301
S D + + W+ K N+ I N W + G ++
Sbjct: 123 GSSDGAISLLTYTGEGQWEVKKINNAHTIGC--NAVSW-APAVVPGSLIDQPSGQKPNYI 179
Query: 302 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV--P-GML 358
+ C D+ I++++E + + + AH+ V VAW P + P +
Sbjct: 180 KKFASGGC-DNLIKLWREEEDGQWKEEQKLE-------AHSDWVRDVAWAPSIGLPTSTI 231
Query: 359 ASCSDDGDVKLW 370
ASCS DG V +W
Sbjct: 232 ASCSQDGRVFIW 243
Score = 133 (51.9 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 46 LKGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
L+GH+G VW V+W +P G +++SC D+ + +W +E N K GH ++
Sbjct: 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEE---NGTWEKTHEHSGHDSSVNSV 109
Query: 104 AWSP--CGNFIASASFD-ATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150
W+P G +A S D A + + GQ+E H +V+W+
Sbjct: 110 CWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWA 159
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 66 SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-G---NFIASASFDATT 121
+S G D I+LW +E G + + + H +R+ AW+P G + IAS S D
Sbjct: 183 ASGGCDNLIKLWREEEDGQWKEEQKL--EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240
Query: 122 AVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179
+W D SG L + V V+WS LA D V +W+ + ++ C
Sbjct: 241 FIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI 300
Query: 180 AVIN 183
+ +N
Sbjct: 301 SDVN 304
Score = 85 (35.0 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 26/108 (24%), Positives = 46/108 (42%)
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI----LASASYDDTVKLFKEDK 217
D + +W E+ +++ + AH V+ V + P + +AS S D V ++ D
Sbjct: 188 DNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
A + + L VW +++ + LA D V +WKE G
Sbjct: 248 ASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDG 295
>RGD|1359555 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005635 "nuclear envelope" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=ISO;ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1359555 GO:GO:0012507 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031 eggNOG:COG2319
GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:BC084705
IPI:IPI00364566 RefSeq:NP_001006979.1 UniGene:Rn.1553
ProteinModelPortal:Q5XFW8 SMR:Q5XFW8 STRING:Q5XFW8 PRIDE:Q5XFW8
Ensembl:ENSRNOT00000014377 GeneID:297522 KEGG:rno:297522
UCSC:RGD:1359555 InParanoid:Q5XFW8 NextBio:642376
Genevestigator:Q5XFW8 Uniprot:Q5XFW8
Length = 322
Score = 224 (83.9 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 77/300 (25%), Positives = 139/300 (46%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + + + GT +++C D++++++ + G A GH+ + + AW+ P
Sbjct: 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL---RGHEGPVWQVAWAHP 68
Query: 108 C-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKS 164
GN +AS S+D +W + +G +E GH++ V SV W+ + G LA S D +
Sbjct: 69 MYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGA 128
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-------FD-------NIL---ASASYD 207
+ + E ++E + NAH V + P D N + AS D
Sbjct: 129 ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCD 188
Query: 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAF-DRIG---SRLATCSDDATVKIWK-EY 262
+ +KL++E++ + W L++H+ V +A+ IG S +A+CS D V IW +
Sbjct: 189 NLIKLWREEE-DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247
Query: 263 KPGN--SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320
GN S + ND VW H +SW +++A + GD+ + ++KE+
Sbjct: 248 ASGNMWSPKLLHKFNDVVW--------H-------VSWSITANILAVSGGDNKVTLWKES 292
Score = 140 (54.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 67/252 (26%), Positives = 104/252 (41%)
Query: 134 NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193
N HE+ + G LATCS D+SV +++V + A + H V +V
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI-LIADLRGHEGPVWQVA 64
Query: 194 F-HP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF--DRIGSRLAT 249
+ HP + NILAS SYD V ++KE+ W H S+V S+ + G LA
Sbjct: 65 WAHPMYGNILASCSYDRKVIIWKEENGT--WEKTHEHSGHDSSVNSVCWAPHDYGLILAC 122
Query: 250 CSDDATVKI--------WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 301
S D + + W+ K N+ I N W + G ++
Sbjct: 123 GSSDGAISLLTYTGEGQWEVKKINNAHTIGC--NAVSW-APAVVPGSLIDQPSGQKPNYI 179
Query: 302 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV--P-GML 358
+ C D+ I++++E + + + AH+ V VAW P + P +
Sbjct: 180 KKFASGGC-DNLIKLWREEEDGQWKEEQKLE-------AHSDWVRDVAWAPSIGLPTSTI 231
Query: 359 ASCSDDGDVKLW 370
ASCS DG V +W
Sbjct: 232 ASCSQDGRVFIW 243
Score = 133 (51.9 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 46 LKGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
L+GH+G VW V+W +P G +++SC D+ + +W +E N K GH ++
Sbjct: 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEE---NGTWEKTHEHSGHDSSVNSV 109
Query: 104 AWSP--CGNFIASASFD-ATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150
W+P G +A S D A + + GQ+E H +V+W+
Sbjct: 110 CWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWA 159
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 66 SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-G---NFIASASFDATT 121
+S G D I+LW +E G + + + H +R+ AW+P G + IAS S D
Sbjct: 183 ASGGCDNLIKLWREEEDGQWKEEQKL--EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240
Query: 122 AVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179
+W D SG L + V V+WS LA D V +W+ + ++ C
Sbjct: 241 FIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI 300
Query: 180 AVIN 183
+ +N
Sbjct: 301 SDVN 304
Score = 85 (35.0 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 26/108 (24%), Positives = 46/108 (42%)
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI----LASASYDDTVKLFKEDK 217
D + +W E+ +++ + AH V+ V + P + +AS S D V ++ D
Sbjct: 188 DNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
A + + L VW +++ + LA D V +WKE G
Sbjct: 248 ASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDG 295
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 233 (87.1 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 70/226 (30%), Positives = 107/226 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 272 ASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 326
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W F AS S D V R G T +GH NEV ++ W +G LA+CS D
Sbjct: 327 VDWQNNTTF-ASCSTDMCIHVC--RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 383
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRF--------HPFDNI-LASASYDDTVKLF 213
++ +W + ++ C + AH +++ +++ +P NI LASAS+D TV+L+
Sbjct: 384 MTLKIWSMKQD---ACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 440
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
++ + TL H V+S+AF G LA+ S D V IW
Sbjct: 441 DVERG----VCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 482
Score = 202 (76.2 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 56/223 (25%), Positives = 100/223 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL-----SDGHQ--- 97
L+GH+ V+ +WNP +++S D R+W N + + +L GH
Sbjct: 178 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 237
Query: 98 -RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ + W+ G +A+ S+D +W + G +TL H+ + ++ W+K G ++
Sbjct: 238 NKDVTSLDWNSDGTLLATGSYDGFARIWTE-DGNLA--STLGQHKGPIFALKWNKKGNYI 294
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+ DK+ +W+ + + +A DV F AS S D + + +
Sbjct: 295 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF----ASCSTDMCIHVCR-- 348
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D T + HT+ V ++ +D G LA+CSDD T+KIW
Sbjct: 349 -LGCDR-PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 389
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 69/300 (23%), Positives = 122/300 (40%)
Query: 88 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD--KRSGQFECNATLE------G 139
+KA + GH+ + AW+P + +AS S D+T +W+ + S L G
Sbjct: 173 SKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGG 232
Query: 140 HE----NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195
H+ +V S+ W+ +G LAT S D +W ED A+ + H + ++++
Sbjct: 233 HDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT---EDG-NLASTLGQHKGPIFALKWN 288
Query: 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255
N + SA D T ++ EA H++ + + + A+CS D
Sbjct: 289 KKGNYILSAGVDKTTIIWDAHTGEAK----QQFPFHSAPALDVDWQN-NTTFASCSTDMC 343
Query: 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AI 314
+ + + G P V T GH + I W + ++ +C DD +
Sbjct: 344 IHVCR-------LGCDRP--------VKTFQGHTNE-VNAIKW-DPSGMLLASCSDDMTL 386
Query: 315 RIFKENPEAGDSDMVSFDL-VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
+I+ +A D+ + ++T + NP MLAS S D V+LW ++
Sbjct: 387 KIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATS---NPNSNIMLASASFDSTVRLWDVE 443
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 35/134 (26%), Positives = 59/134 (44%)
Query: 46 LKGHQGRVWNVSWNPQGT---------MISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
L+ H ++ + W+P G M++S D +RLW E + L+ H
Sbjct: 400 LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVE----RGVCIHTLTK-H 454
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
Q + A+SP G ++AS SFD +W+ +SG + G + V W+ G +
Sbjct: 455 QEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGG---IFEVCWNARGDKV 511
Query: 157 ATCSRDKSVWVWEV 170
+ D SV V ++
Sbjct: 512 GASASDGSVCVLDL 525
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 233 (87.1 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 70/226 (30%), Positives = 107/226 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 272 ASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 326
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W F AS S D V R G T +GH NEV ++ W +G LA+CS D
Sbjct: 327 VDWQNNTTF-ASCSTDMCIHVC--RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 383
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRF--------HPFDNI-LASASYDDTVKLF 213
++ +W + ++ C + AH +++ +++ +P NI LASAS+D TV+L+
Sbjct: 384 MTLKIWSMKQD---ACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 440
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
++ + TL H V+S+AF G LA+ S D V IW
Sbjct: 441 DVERG----VCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 482
Score = 202 (76.2 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 56/223 (25%), Positives = 100/223 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL-----SDGHQ--- 97
L+GH+ V+ +WNP +++S D R+W N + + +L GH
Sbjct: 178 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 237
Query: 98 -RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ + W+ G +A+ S+D +W + G +TL H+ + ++ W+K G ++
Sbjct: 238 NKDVTSLDWNSDGTLLATGSYDGFARIWTE-DGNLA--STLGQHKGPIFALKWNKKGNYI 294
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+ DK+ +W+ + + +A DV F AS S D + + +
Sbjct: 295 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF----ASCSTDMCIHVCR-- 348
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D T + HT+ V ++ +D G LA+CSDD T+KIW
Sbjct: 349 -LGCDR-PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 389
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 69/300 (23%), Positives = 122/300 (40%)
Query: 88 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD--KRSGQFECNATLE------G 139
+KA + GH+ + AW+P + +AS S D+T +W+ + S L G
Sbjct: 173 SKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGG 232
Query: 140 HE----NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195
H+ +V S+ W+ +G LAT S D +W ED A+ + H + ++++
Sbjct: 233 HDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT---EDG-NLASTLGQHKGPIFALKWN 288
Query: 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255
N + SA D T ++ EA H++ + + + A+CS D
Sbjct: 289 KKGNYILSAGVDKTTIIWDAHTGEAK----QQFPFHSAPALDVDWQN-NTTFASCSTDMC 343
Query: 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AI 314
+ + + G P V T GH + I W + ++ +C DD +
Sbjct: 344 IHVCR-------LGCDRP--------VKTFQGHTNE-VNAIKW-DPSGMLLASCSDDMTL 386
Query: 315 RIFKENPEAGDSDMVSFDL-VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
+I+ +A D+ + ++T + NP MLAS S D V+LW ++
Sbjct: 387 KIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATS---NPNSNIMLASASFDSTVRLWDVE 443
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 35/134 (26%), Positives = 59/134 (44%)
Query: 46 LKGHQGRVWNVSWNPQGT---------MISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
L+ H ++ + W+P G M++S D +RLW E + L+ H
Sbjct: 400 LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVE----RGVCIHTLTK-H 454
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
Q + A+SP G ++AS SFD +W+ +SG + G + V W+ G +
Sbjct: 455 QEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGG---IFEVCWNARGDKV 511
Query: 157 ATCSRDKSVWVWEV 170
+ D SV V ++
Sbjct: 512 GASASDGSVCVLDL 525
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 234 (87.4 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 72/231 (31%), Positives = 111/231 (48%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRET 103
+L+GH V S++P G I++ DK+ RLW ES G K +L +GH +
Sbjct: 382 SLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGG-----KCLLDQEGHSDGVMGI 436
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+ G+ +A+ S D +WD RSG+ +GH +V SV WS NG LA+ S D
Sbjct: 437 SIQSDGSLLATGSQDGLVRIWDLRSGR--PILYFQGHSKQVISVDWSPNGYQLASSSEDN 494
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD---------------NILASASYDD 208
+V +W++ ++++ C I AH V V+F N LA+ S+D
Sbjct: 495 TVVIWDIRKKEQ-SCQ--ILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDG 551
Query: 209 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+K + + W AT + H+S V S+ D S++ + S D T KIW
Sbjct: 552 KIKTWSPNT----WSPLATFEGHSSKVTSI--DLTNSKILSTSFDKTWKIW 596
Score = 128 (50.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 41/147 (27%), Positives = 70/147 (47%)
Query: 136 TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195
+LEGH + V ++ G+++ T S DKS +W++ E +C H V +
Sbjct: 382 SLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDL--ESGGKCLLDQEGHSDGVMGISIQ 439
Query: 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255
++LA+ S D V+++ D I + + H+ V S+ + G +LA+ S+D T
Sbjct: 440 SDGSLLATGSQDGLVRIW--DLRSGRPILY--FQGHSKQVISVDWSPNGYQLASSSEDNT 495
Query: 256 VKIWKEYKPGNSAGIPTPDNDSVWKCV 282
V IW K S I ++S+ CV
Sbjct: 496 VVIWDIRKKEQSCQILA--HNSIVSCV 520
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 229 (85.7 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 62/233 (26%), Positives = 114/233 (48%)
Query: 28 TGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG--NK 85
T + +IL + + H V V+W+P+G +++S G D+ +++W + G +
Sbjct: 38 TDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGE 97
Query: 86 FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK 145
F A H + +R + G+ + +AS D + +W QF ++ N V+
Sbjct: 98 FVA-------HSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFV--SSFAQQNNWVR 148
Query: 146 SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205
S +S NG+ +AT S DKSV +++V D EC +++ +HP+ N+LA A
Sbjct: 149 SAKFSPNGKLVATASDDKSVRIYDV---DSGECVRTFTEERAAPRQLAWHPWGNMLAVAL 205
Query: 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
+ +K+F D + + + + H++ V +AF G L + SDD T++I
Sbjct: 206 GCNRIKIF--DVSGSQLLQLYVV--HSAPVNDVAFHPSGHFLLSGSDDRTIRI 254
Score = 211 (79.3 bits), Expect = 9.1e-15, P = 9.1e-15
Identities = 59/216 (27%), Positives = 90/216 (41%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH G + + + P G I++ D + LW A+ I H + AWSP
Sbjct: 16 GHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQ-----AARCIRFASHSAPVNGVAWSP 70
Query: 108 CGNFIASASFDATTAVWDKR----SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
GN +ASA D T +W+ + SG+F H V+SV + G + T S DK
Sbjct: 71 KGNLVASAGHDRTVKIWEPKLRGVSGEFVA------HSKAVRSVDFDSTGHLMLTASDDK 124
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
S +W V A N ++ K F P ++A+AS D +V+++ D E
Sbjct: 125 SAKIWRVARRQFVSSFAQQNNWVRSAK---FSPNGKLVATASDDKSVRIYDVDSGEC--- 178
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
T + LA+ G+ LA +KI+
Sbjct: 179 -VRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIF 213
Score = 188 (71.2 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 56/214 (26%), Positives = 95/214 (44%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLW--GKESFGNKFTAKAILSDGHQRTIRETAWS 106
H V +V ++ G ++ + +DK+ ++W + F + F + +R +S
Sbjct: 101 HSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQ-------NNWVRSAKFS 153
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
P G +A+AS D + ++D SG EC T + + W G LA +
Sbjct: 154 PNGKLVATASDDKSVRIYDVDSG--ECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIK 211
Query: 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA 226
+++V + V +A + DV FHP + L S S D T+++ D E I
Sbjct: 212 IFDVSGSQLLQLYVVHSAPVNDVA---FHPSGHFLLSGSDDRTIRIL--DLLEGRPIY-- 264
Query: 227 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
TL HT V ++AF R G + AT D + +W+
Sbjct: 265 TLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQ 298
Score = 145 (56.1 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 38/122 (31%), Positives = 60/122 (49%)
Query: 139 GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198
GH + + + +G +AT S D +V +W + + C + H V V + P
Sbjct: 16 GHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAAR--CIRFAS-HSAPVNGVAWSPKG 72
Query: 199 NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
N++ASA +D TVK++ E K F +H+ V S+ FD G + T SDD + KI
Sbjct: 73 NLVASAGHDRTVKIW-EPKLRGVSGEFV---AHSKAVRSVDFDSTGHLMLTASDDKSAKI 128
Query: 259 WK 260
W+
Sbjct: 129 WR 130
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 42/185 (22%), Positives = 85/185 (45%)
Query: 56 VSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA 115
++W+P G M++ I+++ + G++ ++ H + + A+ P G+F+ S
Sbjct: 192 LAWHPWGNMLAVALGCNRIKIF--DVSGSQLLQLYVV---HSAPVNDVAFHPSGHFLLSG 246
Query: 116 SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG---- 171
S D T + D G+ TL GH + V +V +S++G AT D+ + VW+
Sbjct: 247 SDDRTIRILDLLEGR--PIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQSNLHTY 304
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF-KEDKA-EADWINFATLK 229
+ ++E + + + + V + S S D ++++ ++ A + NF L
Sbjct: 305 DASQFEAKSALASSSCESSGVSSKQSEGSSTSKSNDLSIRIDPRQSLAYQLSEENFQVLD 364
Query: 230 SHTST 234
S ST
Sbjct: 365 SKHST 369
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 223 (83.6 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 63/211 (29%), Positives = 102/211 (48%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH+ V V+++P G +++S DK +R+W G +A H T+R +
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRA-----HTATVRSVHFCS 113
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G + +AS D T VW +F + T H N V+ +S +G+ + + S DK+V +
Sbjct: 114 DGQLLVTASDDKTVKVWSTHRQRFLFSLTQ--HINWVRCAKFSPDGRLIVSASDDKTVKL 171
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 227
W+ + EC H V V FHP +A+A D+TVK++ D +
Sbjct: 172 WD---KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW--DTRTHRLVQHYQ 226
Query: 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
L H++ V +L+F G+ L T S D+T+KI
Sbjct: 227 L--HSAAVNALSFHPSGNYLITASSDSTLKI 255
Score = 206 (77.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 62/218 (28%), Positives = 93/218 (42%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S + H V +V + G ++ + +DK +++W +F L+ H +R
Sbjct: 96 STVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHR--QRFLFS--LTQ-HINWVRC 150
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G I SAS D T +WDK S EC + H V V + +G +A D
Sbjct: 151 AKFSPDGRLIVSASDDKTVKLWDKTSR--ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMD 208
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+V VW+ + H V + FHP N L +AS D T+K+ D E
Sbjct: 209 NTVKVWDTRT---HRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKIL--DLMEGRL 263
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
+ TL H ++AF R G A+ D V +WK
Sbjct: 264 LY--TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 200 (75.5 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 61/214 (28%), Positives = 97/214 (45%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH+ V V ++ ++S D + +W K ++A GH+ + +S
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHM-----KPQSRAYRFTGHKDAVTCVNFS 70
Query: 107 PCGNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
P G+ +AS S D T +W G+ + H V+SV + +GQ L T S DK+V
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGE---STVFRAHTATVRSVHFCSDGQLLVTASDDKTV 127
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
VW + + HI V+ +F P ++ SAS D TVKL+ DK + ++
Sbjct: 128 KVWSTHRQ---RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRECVH- 181
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ H V + F G+ +A D TVK+W
Sbjct: 182 -SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 162 (62.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 42/127 (33%), Positives = 66/127 (51%)
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
+GH + V V +S N + LA+ S D ++ +W + + A H V V F P
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSR---AYRFTGHKDAVTCVNFSPS 72
Query: 198 DNILASASYDDTVKLFKED-KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
++LAS S D TV+++ + K E+ ++HT+TV S+ F G L T SDD TV
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGES-----TVFRAHTATVRSVHFCSDGQLLVTASDDKTV 127
Query: 257 KIWKEYK 263
K+W ++
Sbjct: 128 KVWSTHR 134
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 231 (86.4 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 95/372 (25%), Positives = 166/372 (44%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGT--MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+S + GH + ++ P + M++ G D R+W ++ T K GH
Sbjct: 135 SSSAIAGHGSTILCSAFAPHTSSRMVTGAG-DNTARIWDCDTQTPMHTLK-----GHYNW 188
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS-----KNGQ 154
+ +WSP G IA+ S D T +WD +SGQ +A L GH + S++W K G
Sbjct: 189 VLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDA-LRGHSKWITSLSWEPIHLVKPGS 247
Query: 155 F--LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 212
LA+ S+D ++ +W+ C ++ H V V++ +L S S+D TV++
Sbjct: 248 KPRLASSSKDGTIKIWDTVSR---VCQYTMSGHTNSVSCVKWGG-QGLLYSGSHDRTVRV 303
Query: 213 FKED---------KAEADWINFATLKSHTSTVWSL---AFDRIGSRLATCSDDATVKIWK 260
+ + K+ A W+N +L ST ++L AFD G + +T ++A K +
Sbjct: 304 WDINSQGRCINILKSHAHWVNHLSL----STDYALRIGAFDHTGKKPST-PEEAQKKALE 358
Query: 261 EY-----KPGNSAGIPTPDNDS----VW------KCVCTLSGHHGRTIYDISWCHLTDLI 305
Y K GNS + +D +W K + ++GH + + +++ I
Sbjct: 359 NYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQ-KLVNHVAFSPDGRYI 417
Query: 306 ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 365
+A D++I+++ + D +S R H V VAW+ +L SCS D
Sbjct: 418 VSASFDNSIKLW----DGRDGKFIS------TFRGHVASVYQVAWSSDCR-LLVSCSKDT 466
Query: 366 DVKLWQIKLENL 377
+K+W ++ L
Sbjct: 467 TLKVWDVRTRKL 478
Score = 180 (68.4 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 48/175 (27%), Positives = 84/175 (48%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
E + L+ ++ ++ + N + M+++ +D + LW K T GHQ+
Sbjct: 350 EEAQKKALENYE-KICKKNGNSEEMMVTA-SDDYTMFLWNPL----KSTKPIARMTGHQK 403
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
+ A+SP G +I SASFD + +WD R G+F +T GH V V WS + + L +
Sbjct: 404 LVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFI--STFRGHVASVYQVAWSSDCRLLVS 461
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
CS+D ++ VW+V + + + H +V V + + S D V+L+
Sbjct: 462 CSKDTTLKVWDVRTR---KLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 72/267 (26%), Positives = 115/267 (43%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T+ GH V V W QG + S D+ +R+W S G IL H + +
Sbjct: 273 TMSGHTNSVSCVKWGGQGLLYSG-SHDRTVRVWDINSQGRCIN---ILKS-HAHWVNHLS 327
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNA-TLEGHENEVKSVTWSKNG---QFLATCS 160
S + +FD T K S E LE +E K KNG + + T S
Sbjct: 328 LST-DYALRIGAFDHTGK---KPSTPEEAQKKALENYEKICK-----KNGNSEEMMVTAS 378
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 220
D ++++W + + A + H + V V F P + SAS+D+++KL+ D +
Sbjct: 379 DDYTMFLWNPLKSTKP--IARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLW--DGRDG 434
Query: 221 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW--KEYK-----PGNSAGIPTP 273
+I+ T + H ++V+ +A+ L +CS D T+K+W + K PG+ + T
Sbjct: 435 KFIS--TFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTV 492
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISWCH 300
D K VC SG + + W H
Sbjct: 493 DWSVDGKRVC--SGGKDKMVR--LWTH 515
>UNIPROTKB|P55735 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9606 "Homo
sapiens" [GO:0051028 "mRNA transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=NAS]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000087 "M phase of
mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=TAS] [GO:0012507 "ER to Golgi transport vesicle
membrane" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0043687 "post-translational protein
modification" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0048208 "COPII vesicle coating"
evidence=TAS] Reactome:REACT_11123 Reactome:REACT_17015
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0006886 GO:GO:0012507 GO:GO:0002474 Reactome:REACT_21300
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0019886
GO:GO:0005789 eggNOG:COG2319 GO:GO:0043687 GO:GO:0018279
GO:GO:0051028 GO:GO:0000236 GO:GO:0048208 GO:GO:0031080 PDB:3BG0
PDB:3BG1 PDBsum:3BG0 PDBsum:3BG1 CTD:6396 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:L09260
EMBL:BC002634 EMBL:BC006167 EMBL:BC091506 IPI:IPI00479141
RefSeq:NP_001129704.1 RefSeq:NP_899195.1 UniGene:Hs.166924
ProteinModelPortal:P55735 SMR:P55735 DIP:DIP-39091N IntAct:P55735
MINT:MINT-1154053 STRING:P55735 PhosphoSite:P55735 DMDM:50403748
PaxDb:P55735 PRIDE:P55735 DNASU:6396 Ensembl:ENST00000337354
Ensembl:ENST00000350697 GeneID:6396 KEGG:hsa:6396 UCSC:uc003bvl.3
GeneCards:GC03M010335 HGNC:HGNC:10697 HPA:HPA035292 MIM:600152
neXtProt:NX_P55735 PharmGKB:PA35620 InParanoid:P55735
EvolutionaryTrace:P55735 GenomeRNAi:6396 NextBio:24846
ArrayExpress:P55735 Bgee:P55735 CleanEx:HS_SEC13
Genevestigator:P55735 GermOnline:ENSG00000157020 Uniprot:P55735
Length = 322
Score = 222 (83.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 76/300 (25%), Positives = 138/300 (46%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + + + GT +++C D++++++ + G A GH+ + + AW+ P
Sbjct: 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL---RGHEGPVWQVAWAHP 68
Query: 108 C-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKS 164
GN +AS S+D +W + +G +E + GH++ V SV W+ + G LA S D +
Sbjct: 69 MYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA 128
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRF-----------HPFD---NIL---ASASYD 207
+ + E ++E + NAH V + HP N + AS D
Sbjct: 129 ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCD 188
Query: 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAF-DRIG---SRLATCSDDATVKIWKEYK 263
+ +KL+KE++ + W L++H+ V +A+ IG S +A+CS D V IW
Sbjct: 189 NLIKLWKEEE-DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247
Query: 264 PGNSAGIPT---PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320
++ P ND VW H +SW +++A + GD+ + ++KE+
Sbjct: 248 ASSNTWSPKLLHKFNDVVW--------H-------VSWSITANILAVSGGDNKVTLWKES 292
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 68/255 (26%), Positives = 106/255 (41%)
Query: 134 NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193
N HE+ + G LATCS D+SV +++V + A + H V +V
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI-LIADLRGHEGPVWQVA 64
Query: 194 F-HP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF--DRIGSRLAT 249
+ HP + NILAS SYD V +++E+ W H S+V S+ + G LA
Sbjct: 65 WAHPMYGNILASCSYDRKVIIWREENGT--WEKSHEHAGHDSSVNSVCWAPHDYGLILAC 122
Query: 250 CSDDATVKI--------WKEYKPGNSAGIPTPDNDSVWKCVC---TLSGHHGRTIYDISW 298
S D + + W+ K N+ I N W +L H +
Sbjct: 123 GSSDGAISLLTYTGEGQWEVKKINNAHTIGC--NAVSWAPAVVPGSLIDHPSGQKPN--- 177
Query: 299 CHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV--P- 355
++ + C D+ I+++KE + + + AH+ V VAW P + P
Sbjct: 178 -YIKRFASGGC-DNLIKLWKEEEDGQWKEEQKLE-------AHSDWVRDVAWAPSIGLPT 228
Query: 356 GMLASCSDDGDVKLW 370
+ASCS DG V +W
Sbjct: 229 STIASCSQDGRVFIW 243
Score = 132 (51.5 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 46 LKGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
L+GH+G VW V+W +P G +++SC D+ + +W +E N K+ GH ++
Sbjct: 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE---NGTWEKSHEHAGHDSSVNSV 109
Query: 104 AWSP--CGNFIASASFD-ATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150
W+P G +A S D A + + GQ+E H +V+W+
Sbjct: 110 CWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWA 159
Score = 113 (44.8 bits), Expect = 0.00088, P = 0.00088
Identities = 34/124 (27%), Positives = 54/124 (43%)
Query: 66 SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-G---NFIASASFDATT 121
+S G D I+LW +E G + + + H +R+ AW+P G + IAS S D
Sbjct: 183 ASGGCDNLIKLWKEEEDGQWKEEQKL--EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240
Query: 122 AVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179
+W D S L + V V+WS LA D V +W+ + ++ C
Sbjct: 241 FIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI 300
Query: 180 AVIN 183
+ +N
Sbjct: 301 SDVN 304
Score = 86 (35.3 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 26/108 (24%), Positives = 48/108 (44%)
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI----LASASYDDTVKLFKEDK 217
D + +W+ E+ +++ + AH V+ V + P + +AS S D V ++ D
Sbjct: 188 DNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
A ++ + L VW +++ + LA D V +WKE G
Sbjct: 248 ASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDG 295
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 231 (86.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 73/233 (31%), Positives = 110/233 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 322 ASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 376
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W F AS S D V R G T +GH NEV ++ W +G LA+CS D
Sbjct: 377 VDWQNNTTF-ASCSTDMCIHVC--RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 433
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRF--------HPFDNI-LASASYDDTVKLF 213
++ +W + +E C + AH +++ +++ +P NI LASAS+D TV+L+
Sbjct: 434 MTLKIWSMKQE---VCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 490
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
++ + TL H V+S+AF G LA+ S D V IW + GN
Sbjct: 491 DIERG----VCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNT-QSGN 538
Score = 199 (75.1 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 55/223 (24%), Positives = 100/223 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL-----SDGHQ--- 97
L+GH+ V+ +WNP +++S D R+W N + + +L GH
Sbjct: 228 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 287
Query: 98 -RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ + W+ G +A+ S+D +W + G +TL H+ + ++ W++ G ++
Sbjct: 288 NKDVTSLDWNTNGTLLATGSYDGFARIWTE-DGNLA--STLGQHKGPIFALKWNRKGNYI 344
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+ DK+ +W+ + + +A DV F AS S D + + +
Sbjct: 345 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF----ASCSTDMCIHVCR-- 398
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D T + HT+ V ++ +D G LA+CSDD T+KIW
Sbjct: 399 -LGCDR-PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 439
Score = 155 (59.6 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 71/301 (23%), Positives = 123/301 (40%)
Query: 87 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD--KRSGQFECNATLE------ 138
++KA + GH+ + AW+P + +AS S D+T +W+ + S L
Sbjct: 222 SSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG 281
Query: 139 GHE----NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194
GH+ +V S+ W+ NG LAT S D +W ED A+ + H + +++
Sbjct: 282 GHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWT---EDG-NLASTLGQHKGPIFALKW 337
Query: 195 HPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254
+ N + SA D T ++ EA H++ + + + A+CS D
Sbjct: 338 NRKGNYILSAGVDKTTIIWDAHTGEAK----QQFPFHSAPALDVDWQN-NTTFASCSTDM 392
Query: 255 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-A 313
+ + + G P V T GH + I W + ++ +C DD
Sbjct: 393 CIHVCR-------LGCDRP--------VKTFQGHTNE-VNAIKW-DPSGMLLASCSDDMT 435
Query: 314 IRIFKENPEAGDSDMVSFDL-VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
++I+ E D+ + + ++T + NP MLAS S D V+LW I
Sbjct: 436 LKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATS---NPNSNIMLASASFDSTVRLWDI 492
Query: 373 K 373
+
Sbjct: 493 E 493
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 230 (86.0 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 70/229 (30%), Positives = 105/229 (45%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 259 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 313
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W N AS S D V + GQ T +GH NEV ++ W G LA+CS D
Sbjct: 314 VDWQS-NNTFASCSTDMCIHVC--KLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 370
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD--------NI----LASASYDDTV 210
++ +W + ++ C + AH +++ +++ P N+ L SAS+D TV
Sbjct: 371 MTLKIWSMKQDS---CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTV 427
Query: 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+L+ D+ I TL H V+S+AF G LA+ S D V IW
Sbjct: 428 RLWDVDRG----ICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 472
Score = 218 (81.8 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 57/223 (25%), Positives = 102/223 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG----KESFGNKFTAKAILSDGHQ---- 97
L+GH+ V+ +WNP +++S D R+W S + + + +G Q
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 98 -RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ + W+ G +A+ S+D +W K G +TL H+ + ++ W+K G F+
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWTK-DGNLA--STLGQHKGPIFALKWNKKGNFI 281
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+ DK+ +W+ + + +A DV +N AS S D + + K
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD----WQSNNTFASCSTDMCIHVCKLG 337
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ T + HT+ V ++ +D G+ LA+CSDD T+KIW
Sbjct: 338 QDRP----IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Score = 138 (53.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 69/302 (22%), Positives = 124/302 (41%)
Query: 89 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD----KRSGQFEC---NATLEGHE 141
KA++ GH+ + AW+P + +AS S D+T +W+ SG + + EG +
Sbjct: 161 KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQ 220
Query: 142 N-----EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196
+ +V S+ W+ G LAT S D +W + A+ + H + ++++
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT----KDGNLASTLGQHKGPIFALKWNK 276
Query: 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
N + SA D T ++ EA H++ + + + A+CS D +
Sbjct: 277 KGNFILSAGVDKTTIIWDAHTGEAK----QQFPFHSAPALDVDWQS-NNTFASCSTDMCI 331
Query: 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIR 315
+ K G P + T GH + I W +L+A+ C DD ++
Sbjct: 332 HVCK-------LGQDRP--------IKTFQGHTNE-VNAIKWDPTGNLLAS-CSDDMTLK 374
Query: 316 IFKENPEAGDSDMVSFDL-VHT-EHRAHNQDVNCVAWNPVVPGMLAS---CSDDGDVKLW 370
I+ ++ D+ + + ++T + N NP MLAS S D V+LW
Sbjct: 375 IWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTN----NPNANLMLASLDSASFDSTVRLW 430
Query: 371 QI 372
+
Sbjct: 431 DV 432
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 231 (86.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 67/217 (30%), Positives = 99/217 (45%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+ L+GH G V++ + + + SC ED +IR W SF N +L GH + +
Sbjct: 336 KVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTN-----TVLYQGHAYPVWDV 390
Query: 104 AWSPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
SP + AS S D T +W R+ A GH +V V + N +LAT S D
Sbjct: 391 DISPYSLYFASGSHDRTARLWSFDRTYPLRIYA---GHLADVDCVKFHPNSNYLATGSTD 447
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
K+V +W + + + H V + F P LASA D +KL+ D A
Sbjct: 448 KTVRLWSAQQGNSVR---LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW--DLASGTL 502
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
F L+ HT + SL F S +A+ S D +V++W
Sbjct: 503 --FKELRGHTDNITSLTFSPDSSLIASASMDNSVRVW 537
Score = 193 (73.0 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 45/172 (26%), Positives = 85/172 (49%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N+ +GH VW+V +P +S D+ RLW SF + + + GH +
Sbjct: 376 NTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLW---SFDRTYPLR--IYAGHLADVD 430
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ P N++A+ S D T +W + G T GH V S+ +S NG++LA+
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT--GHRGPVLSLAFSPNGKYLASAGE 488
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
D+ + +W++ ++ + H ++ + F P +++ASAS D++V+++
Sbjct: 489 DQRLKLWDLASGTLFK---ELRGHTDNITSLTFSPDSSLIASASMDNSVRVW 537
Score = 175 (66.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 45/155 (29%), Positives = 73/155 (47%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH V V ++P +++ DK +RLW + GN L GH+ + A+SP
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GNSVR----LFTGHRGPVLSLAFSP 478
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G ++ASA D +WD SG L GH + + S+T+S + +A+ S D SV V
Sbjct: 479 NGKYLASAGEDQRLKLWDLASGTLF--KELRGHTDNITSLTFSPDSSLIASASMDNSVRV 536
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202
W++ C+A + ++ V N+L+
Sbjct: 537 WDIRNT---HCSAPTDGSSSELVGVYTGQMSNVLS 568
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 39/107 (36%), Positives = 59/107 (55%)
Query: 42 NSQTL-KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
NS L GH+G V +++++P G ++S GED+ ++LW S G F K + GH I
Sbjct: 459 NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS-GTLF--KELR--GHTDNI 513
Query: 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV 147
+SP + IASAS D + VWD R+ C+A +G +E+ V
Sbjct: 514 TSLTFSPDSSLIASASMDNSVRVWDIRNTH--CSAPTDGSSSELVGV 558
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 234 (87.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 49/126 (38%), Positives = 76/126 (60%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
QTL+GH G V +V+++P G +++S DK +RLW + + T + GH +R
Sbjct: 731 QTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLR-----GHSNWVRSV 785
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A+SP G +AS SFD T +WD +G + TL GH + V+SV +S +G+ LA+ S DK
Sbjct: 786 AFSPDGRLLASGSFDKTVRLWDPATGSLQ--QTLRGHSDTVRSVAFSPDGRLLASGSFDK 843
Query: 164 SVWVWE 169
+V +W+
Sbjct: 844 TVRLWD 849
Score = 213 (80.0 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 56/148 (37%), Positives = 80/148 (54%)
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
+AS S D T +WD +G + TLEGH V SV +S +G+ LA+ S DK+V +W+
Sbjct: 710 LASGSDDETVRLWDPATGSLQ--QTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPA 767
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 231
+ + H V+ V F P +LAS S+D TV+L+ D A TL+ H
Sbjct: 768 TGSLQQ---TLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLW--DPATGSLQQ--TLRGH 820
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ TV S+AF G LA+ S D TV++W
Sbjct: 821 SDTVRSVAFSPDGRLLASGSFDKTVRLW 848
Score = 195 (73.7 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 46/126 (36%), Positives = 69/126 (54%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
QTL+GH VW V ++S +D+ +RLW + + T +GH +
Sbjct: 697 QTLEGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTL-----EGHSGWVLSV 743
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A+SP G +AS SFD T +WD +G + TL GH N V+SV +S +G+ LA+ S DK
Sbjct: 744 AFSPDGRLLASGSFDKTVRLWDPATGSLQ--QTLRGHSNWVRSVAFSPDGRLLASGSFDK 801
Query: 164 SVWVWE 169
+V +W+
Sbjct: 802 TVRLWD 807
Score = 179 (68.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 38/115 (33%), Positives = 66/115 (57%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
QTL+GH V +V+++P G +++S DK +RLW + + T + GH T+R
Sbjct: 773 QTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLR-----GHSDTVRSV 827
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
A+SP G +AS SFD T +WD +G + ++G E++ +S++G +++T
Sbjct: 828 AFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTELQ---FSQDGSYIST 879
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 229 (85.7 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 69/227 (30%), Positives = 106/227 (46%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 255 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 309
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W N AS S D V + GQ T +GH NEV ++ W G LA+CS D
Sbjct: 310 VDWQS-NNTFASCSTDMCIHVC--KLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 366
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----DN-----ILA-SASYDDTVKL 212
++ +W + ++ C + AH +++ +++ P +N +LA SAS+D TV+L
Sbjct: 367 MTLKLWSMKQDT---CVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRL 423
Query: 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ ++ TL H V+S+AF G LA+ S D V IW
Sbjct: 424 WDAERGAC----IHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIW 466
Score = 220 (82.5 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 57/226 (25%), Positives = 105/226 (46%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG--KESFGN--KFTAKAILSDGHQ- 97
+ L+GH+ V+ +WNP +++S D R+W + S G + + + +G Q
Sbjct: 158 AMVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQD 217
Query: 98 ----RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 153
+ + W+ G +A+ S+D +W K G +TL H+ + ++ W+K G
Sbjct: 218 VPSNKDVTSLDWNSEGTLLATGSYDGFARIWTK-DGNLA--STLGQHKGPIFALKWNKKG 274
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
F+ + DK+ +W+ + + +A DV +N AS S D + +
Sbjct: 275 NFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD----WQSNNTFASCSTDMCIHVC 330
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
K + T + HT+ V ++ +D G+ LA+CSDD T+K+W
Sbjct: 331 KLGQERP----IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLW 372
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 68/299 (22%), Positives = 121/299 (40%)
Query: 88 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD----KRSGQFEC---NATLEGH 140
+KA++ GH+ + AW+P + +AS S D+T +W+ G + + EG
Sbjct: 156 SKAMVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGG 215
Query: 141 EN-----EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195
++ +V S+ W+ G LAT S D +W + A+ + H + ++++
Sbjct: 216 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT----KDGNLASTLGQHKGPIFALKWN 271
Query: 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255
N + SA D T ++ EA H++ + + + A+CS D
Sbjct: 272 KKGNFILSAGVDKTTIIWDAHTGEAK----QQFPFHSAPALDVDWQS-NNTFASCSTDMC 326
Query: 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AI 314
+ + K G P + T GH + I W +L+A+ C DD +
Sbjct: 327 IHVCK-------LGQERP--------IKTFQGHTNE-VNAIKWDPTGNLLAS-CSDDMTL 369
Query: 315 RIF--KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCSDDGDVKLW 370
+++ K++ D S ++ + N NP MLA S S D V+LW
Sbjct: 370 KLWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTN----NPNANLMLARSASFDSTVRLW 424
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 229 (85.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 69/226 (30%), Positives = 106/226 (46%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 273 ASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 327
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W F AS S D V R G T +GH NEV ++ W +G LA+CS D
Sbjct: 328 VDWQNNTTF-ASCSTDMCIHVC--RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 384
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----DN-----ILASASYDDTVKLF 213
++ +W + ++ C + AH +++ +++ P N +LASAS+D TV+L+
Sbjct: 385 MTLKIWSMKQDT---CVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 441
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
++ + TL H V+S+AF G LA+ S D V IW
Sbjct: 442 DVERG----VCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 483
Score = 202 (76.2 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 56/223 (25%), Positives = 100/223 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL-----SDGHQ--- 97
L+GH+ V+ +WNP +++S D R+W N + + +L GH
Sbjct: 179 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 238
Query: 98 -RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ + W+ G +A+ S+D +W + G +TL H+ + ++ W+K G ++
Sbjct: 239 NKDVTSLDWNSDGTLLATGSYDGFARIWTE-DGNLA--STLGQHKGPIFALKWNKKGNYI 295
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+ DK+ +W+ + + +A DV F AS S D + + +
Sbjct: 296 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF----ASCSTDMCIHVCR-- 349
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D T + HT+ V ++ +D G LA+CSDD T+KIW
Sbjct: 350 -LGCDR-PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 390
Score = 147 (56.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 68/300 (22%), Positives = 121/300 (40%)
Query: 88 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD--KRSGQFECNATLE------G 139
+KA + GH+ + AW+P + +AS S D+T +W+ + S L G
Sbjct: 174 SKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGG 233
Query: 140 HE----NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195
H+ +V S+ W+ +G LAT S D +W ED A+ + H + ++++
Sbjct: 234 HDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT---EDG-NLASTLGQHKGPIFALKWN 289
Query: 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255
N + SA D T ++ EA H++ + + + A+CS D
Sbjct: 290 KKGNYILSAGVDKTTIIWDAHTGEAK----QQFPFHSAPALDVDWQN-NTTFASCSTDMC 344
Query: 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AI 314
+ + + G P V T GH + I W + ++ +C DD +
Sbjct: 345 IHVCR-------LGCDRP--------VKTFQGHTNE-VNAIKW-DPSGMLLASCSDDMTL 387
Query: 315 RIFKENPEAGDSDMVSFDL-VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
+I+ + D+ + ++T + NP MLAS S D V+LW ++
Sbjct: 388 KIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATS---NPNSSIMLASASFDSTVRLWDVE 444
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 35/134 (26%), Positives = 59/134 (44%)
Query: 46 LKGHQGRVWNVSWNPQGT---------MISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
L+ H ++ + W+P G M++S D +RLW E + L+ H
Sbjct: 401 LQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVE----RGVCLHTLTK-H 455
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
Q + A+SP G ++AS SFD +W+ +SG + G + V W+ G +
Sbjct: 456 QEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGG---IFEVCWNARGDKV 512
Query: 157 ATCSRDKSVWVWEV 170
+ D SV V ++
Sbjct: 513 GASASDGSVCVLDL 526
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 231 (86.4 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 61/221 (27%), Positives = 104/221 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+++L GH G V+ ++ P+ ++ SC ED IRLW ++ T + GH + +
Sbjct: 443 TRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYR-----GHVYPVWD 497
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
++P G + S S+D T +W S Q GH ++V V + N ++AT S D
Sbjct: 498 VRFAPHGYYFVSCSYDKTARLWATDSNQ--ALRVFVGHLSDVDCVQFHPNSNYVATGSSD 555
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
++V +W+ + ++ H V + F LAS S D + ++ D +
Sbjct: 556 RTVRLWD---NMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIW--DLSNGSL 610
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
+ TL HTSTV ++ F R G+ LA D + +W +K
Sbjct: 611 VT--TLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHK 649
Score = 215 (80.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 54/188 (28%), Positives = 88/188 (46%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T +GH VW+V + P G SC DK RLW +S N+ + GH +
Sbjct: 487 TYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDS--NQALRVFV---GHLSDVDCVQ 541
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+ P N++A+ S D T +WD +GQ + GH+ V S+ +S G++LA+ S D +
Sbjct: 542 FHPNSNYVATGSSDRTVRLWDNMTGQSV--RLMTGHKGSVSSLAFSACGRYLASGSVDHN 599
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI- 223
+ +W++ + H V + F +LA+A D+ + L+ K D+I
Sbjct: 600 IIIWDLSNGS---LVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTEDYIS 656
Query: 224 NFATLKSH 231
N T+ H
Sbjct: 657 NHITVSHH 664
Score = 163 (62.4 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 57/229 (24%), Positives = 90/229 (39%)
Query: 61 QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120
QG + +D + G FG+ L+ RT+++ + + S D
Sbjct: 378 QGVTCAEISDDSTMLACG---FGDSSVRIWSLTPAKLRTLKD---ADSLRELDKESADIN 431
Query: 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA 180
+ D RSG E +L GH V ++ L +CS D ++ +W + + C
Sbjct: 432 VRMLDDRSG--EVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLT---WSCVV 486
Query: 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240
H+ V VRF P S SYD T +L+ D +A H S V + F
Sbjct: 487 TYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQA----LRVFVGHLSDVDCVQF 542
Query: 241 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289
+ +AT S D TV++W + G S + T SV + G +
Sbjct: 543 HPNSNYVATGSSDRTVRLW-DNMTGQSVRLMTGHKGSVSSLAFSACGRY 590
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 229 (85.7 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 73/233 (31%), Positives = 110/233 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 314 ASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 368
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W F AS S D V R G T +GH NEV ++ W +G LA+CS D
Sbjct: 369 VDWQNNMTF-ASCSTDMCIHVC--RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 425
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRF--------HPFDNI-LASASYDDTVKLF 213
++ +W + +E C + AH +++ +++ +P NI LASAS+D TV+L+
Sbjct: 426 MTLKIWSMKQE---VCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 482
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
++ + TL H V+S+AF G LA+ S D V IW + GN
Sbjct: 483 DIERG----VCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT-QSGN 530
Score = 199 (75.1 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 55/223 (24%), Positives = 100/223 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL-----SDGHQ--- 97
L+GH+ V+ +WNP +++S D R+W N + + +L GH
Sbjct: 220 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 279
Query: 98 -RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ + W+ G +A+ S+D +W + G +TL H+ + ++ W++ G ++
Sbjct: 280 NKDVTSLDWNTNGTLLATGSYDGFARIWTE-DGNLA--STLGQHKGPIFALKWNRKGNYI 336
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+ DK+ +W+ + + +A DV F AS S D + + +
Sbjct: 337 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTF----ASCSTDMCIHVCR-- 390
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D T + HT+ V ++ +D G LA+CSDD T+KIW
Sbjct: 391 -LGCDR-PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 431
Score = 153 (58.9 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 71/301 (23%), Positives = 122/301 (40%)
Query: 87 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD--KRSGQFECNATLE------ 138
++KA + GH+ + AW+P + +AS S D+T +W+ + S L
Sbjct: 214 SSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG 273
Query: 139 GHE----NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194
GH+ +V S+ W+ NG LAT S D +W ED A+ + H + +++
Sbjct: 274 GHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWT---EDG-NLASTLGQHKGPIFALKW 329
Query: 195 HPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254
+ N + SA D T ++ EA H++ + + A+CS D
Sbjct: 330 NRKGNYILSAGVDKTTIIWDAHTGEAK----QQFPFHSAPALDVDWQN-NMTFASCSTDM 384
Query: 255 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-A 313
+ + + G P V T GH + I W + ++ +C DD
Sbjct: 385 CIHVCR-------LGCDRP--------VKTFQGHTNE-VNAIKW-DPSGMLLASCSDDMT 427
Query: 314 IRIFKENPEAGDSDMVSFDL-VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
++I+ E D+ + + ++T + NP MLAS S D V+LW I
Sbjct: 428 LKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATS---NPNSNIMLASASFDSTVRLWDI 484
Query: 373 K 373
+
Sbjct: 485 E 485
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 231 (86.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 67/215 (31%), Positives = 99/215 (46%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L+GH G V++ + + + SC ED +IR W SF N +L GH + +
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTN-----TVLYQGHAYPVWDVDI 392
Query: 106 SPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
SP + AS S D T +W R+ A GH +V V + N +LAT S DK+
Sbjct: 393 SPFSLYFASGSHDRTARLWSFDRTYPLRIYA---GHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W + + + H V + F P LASA D +KL+ D A
Sbjct: 450 VRLWSAQQGNSVR---LFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLW--DLASGTL-- 502
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
F L+ HT ++ SLAF +A+ S D +V++W
Sbjct: 503 FKELRGHTDSITSLAFSPDSGLIASASMDNSVRVW 537
Score = 190 (71.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 45/172 (26%), Positives = 84/172 (48%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N+ +GH VW+V +P +S D+ RLW SF + + + GH +
Sbjct: 376 NTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLW---SFDRTYPLR--IYAGHLADVD 430
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ P N++A+ S D T +W + G T GH V S+++S NG++LA+
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT--GHRGPVLSLSFSPNGKYLASAGE 488
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
D+ + +W++ ++ + H + + F P ++ASAS D++V+++
Sbjct: 489 DQRLKLWDLASGTLFK---ELRGHTDSITSLAFSPDSGLIASASMDNSVRVW 537
Score = 165 (63.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 51/176 (28%), Positives = 76/176 (43%)
Query: 84 NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE 143
N T IL GH + T + + + S S D + WD G F +GH
Sbjct: 330 NTGTEMKILR-GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYP 386
Query: 144 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203
V V S + A+ S D++ +W D + H+ DV V+FHP N LA+
Sbjct: 387 VWDVDISPFSLYFASGSHDRTARLWSF---DRTYPLRIYAGHLADVDCVKFHPNSNYLAT 443
Query: 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
S D TV+L+ + + + T H V SL+F G LA+ +D +K+W
Sbjct: 444 GSTDKTVRLWSAQQGNS--VRLFT--GHRGPVLSLSFSPNGKYLASAGEDQRLKLW 495
Score = 162 (62.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 38/123 (30%), Positives = 61/123 (49%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH V V ++P +++ DK +RLW + GN L GH+ + ++SP
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GNSVR----LFTGHRGPVLSLSFSP 478
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G ++ASA D +WD SG L GH + + S+ +S + +A+ S D SV V
Sbjct: 479 NGKYLASAGEDQRLKLWDLASGTLF--KELRGHTDSITSLAFSPDSGLIASASMDNSVRV 536
Query: 168 WEV 170
W++
Sbjct: 537 WDI 539
Score = 158 (60.7 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 42/107 (39%), Positives = 58/107 (54%)
Query: 42 NSQTL-KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
NS L GH+G V ++S++P G ++S GED+ ++LW S G F K + GH +I
Sbjct: 459 NSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLAS-GTLF--KELR--GHTDSI 513
Query: 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV 147
A+SP IASAS D + VWD RS CN +G E+ V
Sbjct: 514 TSLAFSPDSGLIASASMDNSVRVWDIRSTC--CNTPADGSSGELVGV 558
Score = 37 (18.1 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 3 SIFDLETLLDNQYLL 17
S F L LDN+Y++
Sbjct: 151 SNFQLRAFLDNKYVV 165
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 228 (85.3 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 69/226 (30%), Positives = 107/226 (47%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 265 ASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 319
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W F AS S D V R G T +GH NEV ++ W +G LA+CS D
Sbjct: 320 VDWQNNTTF-ASCSTDMCIHVC--RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 376
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----DN-----ILASASYDDTVKLF 213
++ +W + ++ C + AH +++ +++ P N +LASAS+D TV+L+
Sbjct: 377 MTLKIWSMKQD---ACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLW 433
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
++ + TL+ H V+S+AF G LA+ S D V IW
Sbjct: 434 DMEQG----VCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 475
Score = 210 (79.0 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 58/228 (25%), Positives = 105/228 (46%)
Query: 42 NSQT-LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL-----SDG 95
N T L+GH+ V+ +WNP +++S D R+W G++ + + +L G
Sbjct: 166 NKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGG 225
Query: 96 HQ----RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK 151
H + + W+ G +A+ S+D +W + +G +TL H+ + ++ W+K
Sbjct: 226 HDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTE-NGNLA--STLGQHKGPIFALKWNK 282
Query: 152 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVK 211
G ++ + DK+ +W+ + + +A DV F AS S D +
Sbjct: 283 KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF----ASCSTDMCIH 338
Query: 212 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ + D T + HT+ V ++ +D G LA+CSDD T+KIW
Sbjct: 339 VCR---LGCDR-PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 382
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 35/134 (26%), Positives = 60/134 (44%)
Query: 46 LKGHQGRVWNVSWNPQGT---------MISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
L+ H+ ++ + W+P G M++S D +RLW E T + H
Sbjct: 393 LQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRK-----H 447
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
Q + A+SP G ++AS SFD +W+ +SG + +G + V W+ G +
Sbjct: 448 QEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLV--HSYQG-TGGIFEVCWNAQGDKV 504
Query: 157 ATCSRDKSVWVWEV 170
+ D SV V ++
Sbjct: 505 GASASDGSVCVLDL 518
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 229 (85.7 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 67/217 (30%), Positives = 100/217 (46%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+ L+GH G V++ + + + SC ED +IR W SF N +L GH + +
Sbjct: 332 KVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTN-----TVLYQGHAYPVWDL 386
Query: 104 AWSPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
SP + ASAS D T +W R+ A GH +V V + N +LAT S D
Sbjct: 387 DISPHSLYFASASHDRTARLWSFDRTYPLRIYA---GHLADVDCVKFHPNSNYLATGSTD 443
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
K+V +W + + + H V + F P LASA D +KL+ D A
Sbjct: 444 KTVRLWSTQQGNSVR---LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW--DLASGTL 498
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ L+ HT + SL F S +A+ S D +V++W
Sbjct: 499 --YKELRGHTDNITSLTFSPDSSLVASASMDNSVRVW 533
Score = 197 (74.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 45/172 (26%), Positives = 85/172 (49%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N+ +GH VW++ +P +S D+ RLW SF + + + GH +
Sbjct: 372 NTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLW---SFDRTYPLR--IYAGHLADVD 426
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ P N++A+ S D T +W + G T GH V S+ +S NG++LA+
Sbjct: 427 CVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFT--GHRGPVLSLAFSPNGKYLASAGE 484
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
D+ + +W++ Y+ + H ++ + F P +++ASAS D++V+++
Sbjct: 485 DQRLKLWDLASGTLYK---ELRGHTDNITSLTFSPDSSLVASASMDNSVRVW 533
Score = 172 (65.6 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH V V ++P +++ DK +RLW + GN L GH+ + A+SP
Sbjct: 420 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQ-GNSVR----LFTGHRGPVLSLAFSP 474
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G ++ASA D +WD SG L GH + + S+T+S + +A+ S D SV V
Sbjct: 475 NGKYLASAGEDQRLKLWDLASGTLY--KELRGHTDNITSLTFSPDSSLVASASMDNSVRV 532
Query: 168 WEV 170
W++
Sbjct: 533 WDI 535
Score = 148 (57.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 37/107 (34%), Positives = 58/107 (54%)
Query: 42 NSQTL-KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
NS L GH+G V +++++P G ++S GED+ ++LW S G + K + GH I
Sbjct: 455 NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS-GTLY--KELR--GHTDNI 509
Query: 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV 147
+SP + +ASAS D + VWD RS C+ +G +E+ V
Sbjct: 510 TSLTFSPDSSLVASASMDNSVRVWDIRSSH--CSTPADGSSSELVGV 554
>DICTYBASE|DDB_G0292052 [details] [associations]
symbol:sec13 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0030127 "COPII vesicle coat"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0005643 "nuclear pore" evidence=IEA;ISS]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0012507 "ER to Golgi
transport vesicle membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292052 GenomeReviews:CM000155_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
EMBL:AAFI02000187 GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643
GO:GO:0006888 GO:GO:0051028 GO:GO:0030127 KO:K14004 OMA:IKLWKEE
RefSeq:XP_629794.1 ProteinModelPortal:Q54DS8 SMR:Q54DS8
STRING:Q54DS8 PRIDE:Q54DS8 EnsemblProtists:DDB0235182
GeneID:8628472 KEGG:ddi:DDB_G0292052 ProtClustDB:CLSZ2429468
Uniprot:Q54DS8
Length = 301
Score = 173 (66.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 75/248 (30%), Positives = 110/248 (44%)
Query: 139 GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF-HP- 196
GHE+ V + G+FLATCS DK + +++VG E+ + H V +V + HP
Sbjct: 9 GHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGGENPQHLVD-LRGHEGPVWQVAWAHPK 67
Query: 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF--DRIGSRLATCSDDA 254
F ILASASYD V ++KE W H +V S+++ G LA S D
Sbjct: 68 FGKILASASYDRKVIVWKE-VGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDG 126
Query: 255 TVKI-------WKEYKPGNSAGIPTPDNDSVWK--CVCTLSGHHGRTIYDISWCHLTDLI 305
+V I W+ + + I N W + T + TI + ++
Sbjct: 127 SVTIHNYNNNVWEAPQKIQVSQIGV--NSVSWSPAAIPTSLVNSANTIIPAP---IKRIV 181
Query: 306 ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV--P-GMLASCS 362
+C D+ I+IFK N E D D +H+ +DV AW P + P +ASCS
Sbjct: 182 TGSC-DNLIKIFK-NVE----DKWILDKQLEDHKDWVRDV---AWAPNIGLPYSKIASCS 232
Query: 363 DDGDVKLW 370
D V +W
Sbjct: 233 QDRSVIVW 240
Score = 135 (52.6 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 32/109 (29%), Positives = 59/109 (54%)
Query: 46 LKGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
L+GH+G VW V+W +P+ G +++S D+ + +W KE GN + GH+ ++
Sbjct: 51 LRGHEGPVWQVAWAHPKFGKILASASYDRKVIVW-KE-VGNNSWSIIHQYAGHELSVNSI 108
Query: 104 AWSP--CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150
+W+P G +A AS D + + + + +E ++ + V SV+WS
Sbjct: 109 SWAPHEFGLSLACASSDGSVTIHNYNNNVWEAPQKIQVSQIGVNSVSWS 157
Score = 135 (52.6 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 42/167 (25%), Positives = 81/167 (48%)
Query: 163 KSVWVWEVGEED-EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 221
+ + V ++G + AA+ + + + P I+ + S D+ +K+FK E
Sbjct: 142 QKIQVSQIGVNSVSWSPAAIPTSLVNSANTIIPAPIKRIV-TGSCDNLIKIFKN--VEDK 198
Query: 222 WINFATLKSHTSTVWSLAF-DRIG---SRLATCSDDATVKIWKEYKPGNSAGIPTPD-ND 276
WI L+ H V +A+ IG S++A+CS D +V +W + + G +G P P +D
Sbjct: 199 WILDKQLEDHKDWVRDVAWAPNIGLPYSKIASCSQDRSVIVWTQDENGVWSGKPLPKFDD 258
Query: 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 323
VW+ +SW + +++A +CGD+ + ++KE ++
Sbjct: 259 IVWR---------------VSWSVIGNILAVSCGDNQVTLWKEGVDS 290
Score = 131 (51.2 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 35/125 (28%), Positives = 61/125 (48%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS- 106
GH+ V + ++ G +++C DK I+++ G + + GH+ + + AW+
Sbjct: 9 GHEDMVHDAQFDYYGKFLATCSSDKMIKIF---DVGGENPQHLVDLRGHEGPVWQVAWAH 65
Query: 107 P-CGNFIASASFDATTAVWDK-RSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRD 162
P G +ASAS+D VW + + + GHE V S++W+ + G LA S D
Sbjct: 66 PKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSD 125
Query: 163 KSVWV 167
SV +
Sbjct: 126 GSVTI 130
Score = 125 (49.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 37/126 (29%), Positives = 57/126 (45%)
Query: 92 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS- 150
+ GH+ + + + G F+A+ S D ++D + L GHE V V W+
Sbjct: 6 VDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGGENPQHLVDLRGHEGPVWQVAWAH 65
Query: 151 -KNGQFLATCSRDKSVWVW-EVGEEDEYECAAVINAHIQDVKKVRF--HPFDNILASASY 206
K G+ LA+ S D+ V VW EVG + + H V + + H F LA AS
Sbjct: 66 PKFGKILASASYDRKVIVWKEVGN-NSWSIIHQYAGHELSVNSISWAPHEFGLSLACASS 124
Query: 207 DDTVKL 212
D +V +
Sbjct: 125 DGSVTI 130
Score = 110 (43.8 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 40/144 (27%), Positives = 63/144 (43%)
Query: 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240
V + H V +F + LA+ S D +K+F D + + L+ H VW +A+
Sbjct: 6 VDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIF--DVGGENPQHLVDLRGHEGPVWQVAW 63
Query: 241 --DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 298
+ G LA+ S D V +WKE GN++ W + +GH ++ ISW
Sbjct: 64 AHPKFGKILASASYDRKVIVWKEV--GNNS----------WSIIHQYAGHE-LSVNSISW 110
Query: 299 C-HLTDL-IATACGDDAIRIFKEN 320
H L +A A D ++ I N
Sbjct: 111 APHEFGLSLACASSDGSVTIHNYN 134
Score = 43 (20.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 348 VAWNPVVPGMLA-SCSDDGDVKLWQ 371
V+W+ V+ +LA SC D+ V LW+
Sbjct: 263 VSWS-VIGNILAVSCGDN-QVTLWK 285
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 231 (86.4 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 71/273 (26%), Positives = 127/273 (46%)
Query: 5 FDLETLLDNQYLLPKTIPSTEN----LTGTN--LILCSRCEMINSQTLKGHQGRVWNVSW 58
F+ ET+L + +T+ + N +TG + + + M N + + H+ + +S+
Sbjct: 178 FNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNNVKMYQAHKEAIRGISF 237
Query: 59 NPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 118
+P + S +D +R+W F + + +L GH ++ W P I S S D
Sbjct: 238 SPTDSKFVSGSDDGTLRIW---DF-MRCQEERVLR-GHGADVKCVHWHPQKGMIVSGSKD 292
Query: 119 --ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 176
+WD +SG ATL H++ V + W+ NG +L T SRD + ++++ +
Sbjct: 293 NQQPIKIWDPKSGI--ALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDI--RNLR 348
Query: 177 ECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFK--EDKAEADWINFATLKSHTS 233
E V H ++ V +HP + + S D ++ + DK E + A H S
Sbjct: 349 EEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDK-EIGCVETA----HDS 403
Query: 234 TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
VW+LA+ +G L + S+D T+K W +PG+
Sbjct: 404 IVWTLAWHPLGHILCSGSNDHTIKFWTRNRPGD 436
Score = 164 (62.8 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 55/248 (22%), Positives = 105/248 (42%)
Query: 12 DNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGED 71
D+ Y+ P +P + L + + +R + + T K + ++ ++W P+G + +
Sbjct: 112 DSIYV-PHMLPPSAYLDNPSNAVTTR--FVKTATNK-MRCPIFTLAWTPEGRRLVTGASS 167
Query: 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131
LW G F + IL H ++R WS +++ + W
Sbjct: 168 GEFTLWN----GLTFNFETILQ-AHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNNV 222
Query: 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191
+ + H+ ++ +++S + S D ++ +W+ E V+ H DVK
Sbjct: 223 KM---YQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEER---VLRGHGADVKC 276
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251
V +HP ++ S S D+ + D I ATL +H STV L ++ G+ L T S
Sbjct: 277 VHWHPQKGMIVSGSKDNQQPIKIWDPKSG--IALATLHAHKSTVMDLKWNDNGNWLVTAS 334
Query: 252 DDATVKIW 259
D +K++
Sbjct: 335 RDHLLKLF 342
Score = 54 (24.1 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
AH+ V +AW+P+ +L S S+D +K W
Sbjct: 400 AHDSIVWTLAWHPL-GHILCSGSNDHTIKFW 429
Score = 46 (21.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 14/69 (20%), Positives = 28/69 (40%)
Query: 289 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 348
H ++ ++W L ++ + D I+ + N GD ++L D C
Sbjct: 401 HDSIVWTLAWHPLGHILCSGSNDHTIKFWTRN-RPGDLMRDKYNLNTLPASLAALD-ECE 458
Query: 349 AWNPVVPGM 357
+ ++PGM
Sbjct: 459 YDDAIIPGM 467
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 223 (83.6 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 49/166 (29%), Positives = 88/166 (53%)
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 153
+GH ++I +SPCG F+ ++S D T +W+ C TL GH+ V WS +
Sbjct: 76 EGHTKSISAVKFSPCGKFLGTSSADKTVKIWNM--SDLSCERTLTGHKLGVNDFAWSADS 133
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
+ + T S DK++ ++EV + A + H V F+P +++ S S+D++V+++
Sbjct: 134 KSIVTASDDKTLKIYEV---PTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW 190
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D + TL +H+ V +++F+R GS + + S D V+IW
Sbjct: 191 --DVRTGMCVK--TLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW 232
Score = 179 (68.1 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 50/220 (22%), Positives = 103/220 (46%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL GH+ V + +W+ I + +DK ++++ + T K GH +
Sbjct: 115 RTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLK-----GHTNYVFCC 169
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++P + + S SFD + +WD R+G C TL H + V +V+++++G + + S D
Sbjct: 170 NFNPQSSLVVSGSFDESVRIWDVRTGM--CVKTLPAHSDPVSAVSFNRDGSLITSGSYDG 227
Query: 164 SVWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
V +W+ +C +++ V V+F P + S++ D+T+KL+ K +
Sbjct: 228 LVRIWDTANG---QCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKT-- 282
Query: 223 INFATLKSHTSTVWSLA--FDRIGSR-LATCSDDATVKIW 259
+ H + + + F G + + + S+D + +W
Sbjct: 283 --LKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVW 320
Score = 168 (64.2 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 48/178 (26%), Positives = 87/178 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL H V VS+N G++I+S D +R+W N K ++ D + +
Sbjct: 199 KTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDT---ANGQCVKTLVDDENP-PVAFV 254
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWS-KNGQFLATCS 160
+SP G +I S++ D T +WD G+ + +GHEN + +S G+++ + S
Sbjct: 255 KFSPNGKYILSSNLDNTLKLWD--FGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGS 312
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKED 216
D ++VW + + E + H Q V HP N++AS + D+T+++++ D
Sbjct: 313 EDCKIYVWNLQTK---EVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIWRSD 367
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 38/131 (29%), Positives = 71/131 (54%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
++TLKGH V+ ++NPQ +++ S D+++R+W + G K + H +
Sbjct: 156 AKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRT-G--MCVKTL--PAHSDPVSA 210
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSR 161
+++ G+ I S S+D +WD +GQ C TL EN V V +S NG+++ + +
Sbjct: 211 VSFNRDGSLITSGSYDGLVRIWDTANGQ--CVKTLVDDENPPVAFVKFSPNGKYILSSNL 268
Query: 162 DKSVWVWEVGE 172
D ++ +W+ G+
Sbjct: 269 DNTLKLWDFGK 279
Score = 150 (57.9 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 38/126 (30%), Positives = 63/126 (50%)
Query: 135 ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194
+T+EGH + +V +S G+FL T S DK+V +W + + C + H V +
Sbjct: 73 STIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSD---LSCERTLTGHKLGVNDFAW 129
Query: 195 HPFDNILASASYDDTVKLFKEDKAEADWINFA-TLKSHTSTVWSLAFDRIGSRLATCSDD 253
+ +AS D T+K++ E + A TLK HT+ V+ F+ S + + S D
Sbjct: 130 SADSKSIVTASDDKTLKIY-----EVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFD 184
Query: 254 ATVKIW 259
+V+IW
Sbjct: 185 ESVRIW 190
>UNIPROTKB|E1BVC4 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AADN02014522 EMBL:AADN02014521 IPI:IPI00586706
RefSeq:XP_414450.3 UniGene:Gga.12581 ProteinModelPortal:E1BVC4
Ensembl:ENSGALT00000013715 GeneID:416119 KEGG:gga:416119
Uniprot:E1BVC4
Length = 320
Score = 219 (82.2 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 75/300 (25%), Positives = 135/300 (45%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + + + GT +++C D++++++ + G A GH+ + + AW+ P
Sbjct: 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL---RGHEGPVWQVAWAHP 68
Query: 108 C-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKS 164
GN +AS S+D +W + +G +E GH++ V SV W+ + G LA S D +
Sbjct: 69 MYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGA 128
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF--------------DNIL---ASASYD 207
+ + + ++E + NAH V + P N + AS D
Sbjct: 129 ISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGGCD 188
Query: 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAF-DRIG---SRLATCSDDATVKIWKEYK 263
+ VK++KE+ + W L++H+ V +A+ IG S +A+CS D V IW
Sbjct: 189 NLVKIWKEE--DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 246
Query: 264 PGNSAGIPT---PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320
S+ P ND VW H +SW +++A + GD+ + ++KE+
Sbjct: 247 ASGSSWSPKLLHKFNDVVW--------H-------VSWSITANILAVSGGDNKVTLWKES 291
Score = 172 (65.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 77/296 (26%), Positives = 115/296 (38%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--G 153
H+ I + G +A+ S D + ++D R+G A L GHE V V W+ G
Sbjct: 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYG 71
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN--ILASASYDDTVK 211
LA+CS D+ V +W+ E +E H V V + P D ILA S D +
Sbjct: 72 NILASCSYDRKVIIWKE-ENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130
Query: 212 LFKEDKAEADWINFATLKSHT----STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 267
L + W +HT + W+ A GS + S I K + G
Sbjct: 131 LLSYT-GDGQWEVKKISNAHTIGCNAVSWAPAVVP-GSLIEQPSGQKPNYI-KRFASGGC 187
Query: 268 AGIPT--PDNDSVWKCVCTLSGHHGRTIYDISWCHL----TDLIATACGDDAIRIFKENP 321
+ + D WK L H + D++W T IA+ C D R+F
Sbjct: 188 DNLVKIWKEEDGQWKEEQKLEAHSD-WVRDVAWAPSIGLPTSTIAS-CSQDG-RVFIWTC 244
Query: 322 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377
+ S L+H N V V+W+ + +LA D V LW+ ++ L
Sbjct: 245 DDASGSSWSPKLLHK----FNDVVWHVSWS-ITANILAVSGGDNKVTLWKESVDGL 295
Score = 145 (56.1 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 73/254 (28%), Positives = 102/254 (40%)
Query: 134 NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193
N HE+ + G LATCS D+SV +++V + A + H V +V
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI-LIADLRGHEGPVWQVA 64
Query: 194 F-HP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF--DRIGSRLAT 249
+ HP + NILAS SYD V ++KE+ W H S+V S+ + G LA
Sbjct: 65 WAHPMYGNILASCSYDRKVIIWKEENGT--WEKTYEYTGHDSSVNSVCWAPHDYGLILAC 122
Query: 250 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT---DLIA 306
S D + + Y D W+ V +S H +SW LI
Sbjct: 123 GSSDGAISLLS-YT-----------GDGQWE-VKKISNAHTIGCNAVSWAPAVVPGSLIE 169
Query: 307 TACGDDAIRIFKENPEAGDSDMVSF----DLVHTEHR---AHNQDVNCVAWNPVV--P-G 356
G I K G ++V D E + AH+ V VAW P + P
Sbjct: 170 QPSGQKPNYI-KRFASGGCDNLVKIWKEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS 228
Query: 357 MLASCSDDGDVKLW 370
+ASCS DG V +W
Sbjct: 229 TIASCSQDGRVFIW 242
Score = 134 (52.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 46 LKGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
L+GH+G VW V+W +P G +++SC D+ + +W +E N K GH ++
Sbjct: 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEE---NGTWEKTYEYTGHDSSVNSV 109
Query: 104 AWSP--CGNFIASASFDATTAVWDKRS-GQFECNATLEGHENEVKSVTWS 150
W+P G +A S D ++ GQ+E H +V+W+
Sbjct: 110 CWAPHDYGLILACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWA 159
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 226 (84.6 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 87/363 (23%), Positives = 159/363 (43%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ ++ GH V +++++P G ++S D +RLW + FT GH++ +
Sbjct: 112 TSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCT-----GHKQWVLC 166
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-----NGQFLA 157
+W+P G +AS + +WD +GQ + L GH+ + + W + LA
Sbjct: 167 VSWAPDGKRLASGCKAGSIIIWDPETGQ-QKGRPLSGHKKHINCLAWEPYHRDPECRKLA 225
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE-D 216
+ S D +W+V +C I H V VR+ ++ ++S D TVK+++ D
Sbjct: 226 SASGDGDCRIWDVKLG---QCLMNIAGHTNAVTAVRWGGA-GLIYTSSKDRTVKMWRAAD 281
Query: 217 -------KAEADWINFATLKSH---TSTVWSLAFDRIGSRLATCSDDATVKIWKEYK--- 263
A W+N L + + + DR S L+ +++ K Y+
Sbjct: 282 GILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVC 341
Query: 264 PGNSAGIPTPDNDS---VW-----KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 315
P + + +D+ +W KCV ++GH + D+ + LIA+A D ++R
Sbjct: 342 PDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQN-VVNDVKYSPDVKLIASASFDKSVR 400
Query: 316 IFKENPEAGDSD-MVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374
+++ A D M +F R H Q V VAW+ ++ S S D +K+W ++
Sbjct: 401 LWR----ASDGQYMATF-------RGHVQAVYTVAWS-ADSRLIVSGSKDSTLKVWSVQT 448
Query: 375 ENL 377
+ L
Sbjct: 449 KKL 451
Score = 182 (69.1 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 45/147 (30%), Positives = 71/147 (48%)
Query: 67 SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK 126
SC +D + LW NK + GHQ + + +SP IASASFD + +W
Sbjct: 350 SCSDDNTLYLWRNNQ--NKCVERMT---GHQNVVNDVKYSPDVKLIASASFDKSVRLWRA 404
Query: 127 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 186
GQ+ AT GH V +V WS + + + + S+D ++ VW V + + A + H
Sbjct: 405 SDGQYM--ATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTK---KLAQELPGHA 459
Query: 187 QDVKKVRFHPFDNILASASYDDTVKLF 213
+V V + P + +AS D +KL+
Sbjct: 460 DEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 14 QYLLPKTIPSTENLTGTNLILCSRCEMINS-QTLKGHQGRVWNVSWNPQGTMISSCGEDK 72
Q + P + S + + N + R + + GHQ V +V ++P +I+S DK
Sbjct: 338 QAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDK 397
Query: 73 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE 132
++RLW + S G ++ A GH + + AWS I S S D+T VW ++ +
Sbjct: 398 SVRLW-RASDG-QYMATF---RGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLA 452
Query: 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168
L GH +EV V W+ +G +A+ +DK + +W
Sbjct: 453 --QELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 161 (61.7 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 44/149 (29%), Positives = 73/149 (48%)
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
+ S S D T +W R+ Q +C + GH+N V V +S + + +A+ S DKSV +W
Sbjct: 348 LVSCSDDNTLYLW--RNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRAS 405
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK-EDKAEADWINFATLKS 230
+ +Y A H+Q V V + ++ S S D T+K++ + K A L
Sbjct: 406 D-GQY--MATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQ-----ELPG 457
Query: 231 HTSTVWSLAFDRIGSRLATCSDDATVKIW 259
H V+ + + GSR+A+ D +K+W
Sbjct: 458 HADEVFGVDWAPDGSRVASGGKDKVIKLW 486
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 226 (84.6 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 66/214 (30%), Positives = 108/214 (50%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH+ + +NP +++ DK++ +W + K A+A GH I ++
Sbjct: 15 KGHKDVISCADFNPNNKQLATGSCDKSLMIW---NLAPK--ARAFRFVGHTDVITGVNFA 69
Query: 107 PCGNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
P G+ +AS+S D T +W G+ + + H V+SV +S++GQ L T S DKSV
Sbjct: 70 PSGSLVASSSRDQTVRLWTPSIKGE---STVFKAHTASVRSVHFSRDGQRLVTASDDKSV 126
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
VW V E ++ + +N H V+ RF P ++AS D TV+L+ D + IN
Sbjct: 127 KVWGV-ERKKFLYS--LNRHTNWVRCARFSPDGRLIASCGDDRTVRLW--DTSSHQCINI 181
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
T ++T + F+ G+ +A+ D T+KIW
Sbjct: 182 FTDYGGSATF--VDFNSSGTCIASSGADNTIKIW 213
Score = 212 (79.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 62/218 (28%), Positives = 95/218 (43%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S K H V +V ++ G + + +DK++++WG E KF + H +R
Sbjct: 95 STVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVER--KKFLYSL---NRHTNWVRC 149
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G IAS D T +WD S Q C + V ++ +G +A+ D
Sbjct: 150 ARFSPDGRLIASCGDDRTVRLWDTSSHQ--CINIFTDYGGSATFVDFNSSGTCIASSGAD 207
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
++ +W++ + V NA V FHP N L S S D T+K+ D E
Sbjct: 208 NTIKIWDIRTNKLIQHYKVHNA---GVNCFSFHPSGNYLISGSSDSTIKIL--DLLEGRL 262
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
I TL H V ++ F R G A+ D+ V +WK
Sbjct: 263 IY--TLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK 298
Score = 172 (65.6 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
+GH++ + ++ N + LAT S DKS+ +W + + A H + V F P
Sbjct: 15 KGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKAR---AFRFVGHTDVITGVNFAPS 71
Query: 198 DNILASASYDDTVKLFKED-KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
+++AS+S D TV+L+ K E+ K+HT++V S+ F R G RL T SDD +V
Sbjct: 72 GSLVASSSRDQTVRLWTPSIKGES-----TVFKAHTASVRSVHFSRDGQRLVTASDDKSV 126
Query: 257 KIWKEYKPGNSAGIPTPDNDSVW-KCV-------CTLSGHHGRTI--YDISWCHLTDLIA 306
K+W + + N W +C S RT+ +D S H I
Sbjct: 127 KVWGVERKKFLYSLNRHTN---WVRCARFSPDGRLIASCGDDRTVRLWDTS-SHQCINIF 182
Query: 307 TACGDDAIRI-FKEN----PEAGDSDMVSFDLVHT----EH-RAHNQDVNCVAWNPVVPG 356
T G A + F + +G + + + T +H + HN VNC +++P
Sbjct: 183 TDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPS-GN 241
Query: 357 MLASCSDDGDVKL 369
L S S D +K+
Sbjct: 242 YLISGSSDSTIKI 254
Score = 134 (52.2 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 50/194 (25%), Positives = 87/194 (44%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG--NKFTAKAILSDGHQRTIRE 102
+L H V ++P G +I+SCG+D+ +RLW S N FT G T +
Sbjct: 139 SLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFT-----DYGGSATFVD 193
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
++ G IAS+ D T +WD R+ + + + H V ++ +G +L + S D
Sbjct: 194 --FNSSGTCIASSGADNTIKIWDIRTNKLIQHYKV--HNAGVNCFSFHPSGNYLISGSSD 249
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
++ + ++ E ++ H V V F ++ AS D V ++K + D
Sbjct: 250 STIKILDLLEG---RLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTN---FDS 303
Query: 223 INFATLKS-HTSTV 235
+N+ L S H+ V
Sbjct: 304 LNYRELLSKHSKRV 317
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 188 (71.2 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 55/185 (29%), Positives = 87/185 (47%)
Query: 39 EMINSQTLKG--------HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA 90
E IN +T+K H V++ ++ G I+SCG DK ++++ E+ KA
Sbjct: 596 EWINKKTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA 655
Query: 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--T 148
H+ + A+S ++IA+ S D +WD +G+ T E H +V T
Sbjct: 656 -----HEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLV--HTYEEHSEQVNCCHFT 708
Query: 149 WSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208
N LAT S D + +W++ ++ EC + H V RF P D +LAS S D
Sbjct: 709 NKSNHLLLATGSNDSFLKLWDLNQK---ECRNTMFGHTNSVTHCRFSPDDELLASCSADG 765
Query: 209 TVKLF 213
T+KL+
Sbjct: 766 TLKLW 770
Score = 144 (55.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 53/229 (23%), Positives = 96/229 (41%)
Query: 64 MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123
++++ D ++LW K + GH ++ +SP +AS S D T +
Sbjct: 715 LLATGSNDSFLKLW---DLNQKECRNTMF--GHTNSVTHCRFSPDDELLASCSADGTLKL 769
Query: 124 WDKRSGQFECNATL-----------EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172
WD RS + + + E E VK +WS +G + +++K V + ++
Sbjct: 770 WDVRSANEKKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIVAAKNK-VLLLDIHT 828
Query: 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT 232
+ H ++ F P+D++ A V+L+ D + A + H
Sbjct: 829 SGLL--TEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR----VKVADCRGHL 882
Query: 233 STVWSLAFDRIGSRLATCSDDATVKIWKEYKP-GNSAGIPTPDNDSVWK 280
S V + F GS T SDD T+++W+ K NSA + + D V++
Sbjct: 883 SWVHGVMFSPDGSSFLTASDDQTIRVWETRKVCKNSAIVLKQEIDVVFQ 931
Score = 136 (52.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRETA 104
+K H+ V +++ + I++C DK +++W G T K + + + H +
Sbjct: 653 IKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDS---G---TGKLVHTYEEHSEQVNCCH 706
Query: 105 WSPCGN--FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
++ N +A+ S D+ +WD Q EC T+ GH N V +S + + LA+CS D
Sbjct: 707 FTNKSNHLLLATGSNDSFLKLWDLN--QKECRNTMFGHTNSVTHCRFSPDDELLASCSAD 764
Query: 163 KSVWVWEVGEEDE 175
++ +W+V +E
Sbjct: 765 GTLKLWDVRSANE 777
Score = 121 (47.7 bits), Expect = 0.00077, P = 0.00077
Identities = 45/170 (26%), Positives = 77/170 (45%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH++ +R ++ G + S+S D+ VW+ ++ ++ L+ H+ VK ++ +
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEY---VFLQAHQETVKDFRLLRDSR 1057
Query: 155 FLATCSRDKSVWVWEV--GE-EDEYEC--AAVINAHIQDVKKVRFHPFDNILASASYDDT 209
L+ S D +V VW V G E ++ C V++ I +F +S S D T
Sbjct: 1058 LLSW-SFDGTVKVWNVITGRIERDFTCHQGTVLSCAISS-DATKF-------SSTSADKT 1108
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
K++ + LK H S V AF G LAT D+ ++IW
Sbjct: 1109 AKIWSFELPSP----LHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIW 1154
Score = 96 (38.9 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 26/79 (32%), Positives = 35/79 (44%)
Query: 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240
V+ H V F +AS D T+++FK + E +K+H V AF
Sbjct: 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGE----KLLDIKAHEDEVLCCAF 665
Query: 241 DRIGSRLATCSDDATVKIW 259
S +ATCS D VKIW
Sbjct: 666 SSDDSYIATCSVDKKVKIW 684
Score = 94 (38.1 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 40/165 (24%), Positives = 72/165 (43%)
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW----KEYKPGNSAGIPTPD----ND 276
F++ H V + F G L + S+D+ +++W +EY + D D
Sbjct: 996 FSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVFLQAHQETVKDFRLLRD 1055
Query: 277 S---VWKCVCTLSGHH---GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 330
S W T+ + GR D + CH +++ A DA + F + + S
Sbjct: 1056 SRLLSWSFDGTVKVWNVITGRIERDFT-CHQGTVLSCAISSDATK-FSSTSADKTAKIWS 1113
Query: 331 FDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDD-GDVKLWQI 372
F+L H + HN V C A++ + G+L + DD G++++W +
Sbjct: 1114 FELPSPLHELKGHNSCVRCSAFS--LDGILLATGDDNGEIRIWNV 1156
Score = 92 (37.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 39/181 (21%), Positives = 72/181 (39%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA---ILS-----DGH 96
T+ GH V + ++P +++SC D ++LW S K + LS +
Sbjct: 738 TMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEKKSINVKRFFLSSEDPPEDV 797
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ ++ +WS G+ I A+ + + SG T GH + ++ +S
Sbjct: 798 EVIVKCCSWSADGDRIIVAAKNKVLLLDIHTSGLLTEIHT--GHHSTIQYCDFSPYDHLA 855
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
V +W + D A H+ V V F P + +AS D T+++++
Sbjct: 856 VIALSQYCVELWNI---DSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETR 912
Query: 217 K 217
K
Sbjct: 913 K 913
Score = 76 (31.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 25/86 (29%), Positives = 41/86 (47%)
Query: 296 ISWCHLTD-----LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350
++ CH T+ L+AT D ++++ N + + M HT H C +
Sbjct: 702 VNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFG----HTNSVTH-----C-RF 751
Query: 351 NPVVPGMLASCSDDGDVKLWQIKLEN 376
+P +LASCS DG +KLW ++ N
Sbjct: 752 SPD-DELLASCSADGTLKLWDVRSAN 776
Score = 42 (19.8 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
R H V+ V ++P L + SDD +++W+ +
Sbjct: 879 RGHLSWVHGVMFSPDGSSFLTA-SDDQTIRVWETR 912
>UNIPROTKB|Q3ZCC9 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9913 "Bos
taurus" [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0012507 GO:GO:0000776 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0051028 GO:GO:0031080 EMBL:BC102514
IPI:IPI00691005 RefSeq:NP_001069033.1 UniGene:Bt.62595
ProteinModelPortal:Q3ZCC9 SMR:Q3ZCC9 STRING:Q3ZCC9 PRIDE:Q3ZCC9
Ensembl:ENSBTAT00000023702 GeneID:512530 KEGG:bta:512530 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 InParanoid:Q3ZCC9 KO:K14004 OMA:IKLWKEE
OrthoDB:EOG40P471 NextBio:20870435 Uniprot:Q3ZCC9
Length = 322
Score = 218 (81.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 76/300 (25%), Positives = 138/300 (46%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + + + GT +++C D++++++ + G A GH+ + + AW+ P
Sbjct: 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADL---RGHEGPVWQVAWAHP 68
Query: 108 C-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKS 164
GN +AS S+D +W + +G +E GH++ V SV W+ + G LA S D +
Sbjct: 69 MYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGA 128
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-------FD-------NIL---ASASYD 207
+ + ++E + NAH V + P D N + AS D
Sbjct: 129 ISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCD 188
Query: 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAF-DRIG---SRLATCSDDATVKIWK-EY 262
+ +KL+KE++ + W L++H+ V +A+ IG S +A+CS D V +W +
Sbjct: 189 NLIKLWKEEE-DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDD 247
Query: 263 KPGN--SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320
GN S + ND VW H +SW +++A + GD+ + ++KE+
Sbjct: 248 ASGNTWSPKLLHKFNDVVW--------H-------VSWSITANILAVSGGDNKVTLWKES 292
Score = 142 (55.0 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 68/252 (26%), Positives = 104/252 (41%)
Query: 134 NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193
N HE+ + G LATCS D+SV +++V + A + H V +V
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI-LVADLRGHEGPVWQVA 64
Query: 194 F-HP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF--DRIGSRLAT 249
+ HP + NILAS SYD V ++KE+ W H S+V S+ + G LA
Sbjct: 65 WAHPMYGNILASCSYDRKVIIWKEENGT--WEKTHEHTGHDSSVNSVCWAPHDYGLILAC 122
Query: 250 CSDDATVKI--------WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 301
S D + + W+ K N+ I N W + G ++
Sbjct: 123 GSSDGAISLLTYTGLGQWEVKKINNAHTIGC--NAVSW-APAVVPGSLIDQPSGQKPNYI 179
Query: 302 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV--P-GML 358
+ C D+ I+++KE + + + AH+ V VAW P + P +
Sbjct: 180 KKFASGGC-DNLIKLWKEEEDGQWKEEQKLE-------AHSDWVRDVAWAPSIGLPTSTI 231
Query: 359 ASCSDDGDVKLW 370
ASCS DG V +W
Sbjct: 232 ASCSQDGRVFVW 243
Score = 131 (51.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 46 LKGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
L+GH+G VW V+W +P G +++SC D+ + +W +E N K GH ++
Sbjct: 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEE---NGTWEKTHEHTGHDSSVNSV 109
Query: 104 AWSP--CGNFIASASFDATTAVWDKRS-GQFECNATLEGHENEVKSVTWS 150
W+P G +A S D ++ GQ+E H +V+W+
Sbjct: 110 CWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWA 159
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 36/124 (29%), Positives = 55/124 (44%)
Query: 66 SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-G---NFIASASFDATT 121
+S G D I+LW +E G + + + H +R+ AW+P G + IAS S D
Sbjct: 183 ASGGCDNLIKLWKEEEDGQWKEEQKL--EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240
Query: 122 AVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179
VW D SG L + V V+WS LA D V +W+ + ++ C
Sbjct: 241 FVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI 300
Query: 180 AVIN 183
+ +N
Sbjct: 301 SDVN 304
Score = 84 (34.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI----LASASYDDTVKLFKEDK 217
D + +W+ E+ +++ + AH V+ V + P + +AS S D V ++ D
Sbjct: 188 DNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDD 247
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
A + + L VW +++ + LA D V +WKE G
Sbjct: 248 ASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDG 295
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 226 (84.6 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 57/221 (25%), Positives = 106/221 (47%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC 108
H+ V ++S+ SC +D +++W F +++ GH ++ W P
Sbjct: 48 HRESVRDLSFCRTDLKFCSCSDDTTVKVW---DFARCQEERSLT--GHGWDVKSVDWHPT 102
Query: 109 GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168
+ + S D +WD +SG+ E + GH+N V+ V W++NG ++ T S+D+ + ++
Sbjct: 103 KSLLVSGGKDYLVKLWDAKSGR-ELRS-FHGHKNIVQCVKWNQNGNWVLTASKDQIIKLY 160
Query: 169 EVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVK--LFKEDKAEADWINF 225
++ E E H +DV + +HPF + S SYD + L + + + IN
Sbjct: 161 DIRSMKELES---FRGHNKDVTALAWHPFHEEYFVSGSYDGAIFHWLVGHETPQIE-INN 216
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
A H ++VW LA+ +G L + +D + W +PG+
Sbjct: 217 A----HDNSVWDLAWHPVGYLLCSGGNDHATRFWCRNRPGD 253
Score = 181 (68.8 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 47/179 (26%), Positives = 89/179 (49%)
Query: 36 SRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG 95
+RC+ ++L GH V +V W+P +++ S G+D ++LW +S G + + G
Sbjct: 79 ARCQ--EERSLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDAKS-GRELRS----FHG 131
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQ 154
H+ ++ W+ GN++ +AS D ++D RS + E + GH +V ++ W + +
Sbjct: 132 HKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMK-ELES-FRGHNKDVTALAWHPFHEE 189
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
+ + S D +++ W VG E + NAH V + +HP +L S D + +
Sbjct: 190 YFVSGSYDGAIFHWLVGHETPQ--IEINNAHDNSVWDLAWHPVGYLLCSGGNDHATRFW 246
Score = 145 (56.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 39/169 (23%), Positives = 74/169 (43%)
Query: 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150
++ H + +R WS N++ + W + N T H V+ +++
Sbjct: 1 MILQAHDQAVRSMIWSNNENWMVTGDDGGAIKYWQSNMNNVKVNKT--AHRESVRDLSFC 58
Query: 151 KNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210
+ +CS D +V VW+ E + H DVK V +HP ++L S D V
Sbjct: 59 RTDLKFCSCSDDTTVKVWDFARCQEERS---LTGHGWDVKSVDWHPTKSLLVSGGKDYLV 115
Query: 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
KL+ + K+ + +F H + V + +++ G+ + T S D +K++
Sbjct: 116 KLW-DAKSGRELRSF---HGHKNIVQCVKWNQNGNWVLTASKDQIIKLY 160
Score = 48 (22.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 338 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
+ AH+ V +AW+PV +L S +D + W
Sbjct: 215 NNAHDNSVWDLAWHPV-GYLLCSGGNDHATRFW 246
Score = 48 (22.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 285 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 325
++ H +++D++W + L+ + D A R + N GD
Sbjct: 214 INNAHDNSVWDLAWHPVGYLLCSGGNDHATRFWCRN-RPGD 253
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 229 (85.7 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 63/233 (27%), Positives = 110/233 (47%)
Query: 40 MINSQTLKGHQGR-VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
M N+ H+ + +++ P ++ +D R+W F ++T + +L GH
Sbjct: 206 MNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVW---DFA-RYTEERVLR-GHGA 260
Query: 99 TIRETAWSPCGNFIASASFDATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+R W P IA+ S D V WD +SG C ATL+ H++ V +V ++KNG +L
Sbjct: 261 EVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGS--CLATLQEHKSSVMAVEFNKNGNWL 318
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKE 215
T RD V ++++ E AH ++V + +HP + + S D ++ +
Sbjct: 319 LTGGRDHLVKMYDIRMMKEMR---TYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMV 375
Query: 216 D-KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 267
D + E + A H +WS+ + +G LAT S+D K W +PG++
Sbjct: 376 DGEKEIGLLEHA----HDQAIWSMKWHPLGHILATGSNDNNTKFWARNRPGDT 424
Score = 165 (63.1 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 54/212 (25%), Positives = 94/212 (44%)
Query: 53 VWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
V++V W+P+G +I+ C + LW G F + IL H IR W+ +
Sbjct: 136 VYSVCWSPEGKRLITGC-QTGEFTLWN----GTAFNFETILQ-AHDSAIRALKWASNEQW 189
Query: 112 IASASFDATTAVWDKRSGQFECNATL-EGHENE-VKSVTWSKNGQFLATCSRDKSVWVWE 169
+ SA W NA + H++E ++ + ++ AT S D + VW+
Sbjct: 190 LLSADQGGYVKYWQPNMN----NAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWD 245
Query: 170 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD--DTVKLFKEDKAEADWINFAT 227
E V+ H +V+ + +HP ++A+ S D VK++ AT
Sbjct: 246 FARYTEER---VLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSC----LAT 298
Query: 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
L+ H S+V ++ F++ G+ L T D VK++
Sbjct: 299 LQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMY 330
Score = 139 (54.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 69/296 (23%), Positives = 126/296 (42%)
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
+ WSP G + + +W+ + FE L+ H++ ++++ W+ N Q+L +
Sbjct: 136 VYSVCWSPEGKRLITGCQTGEFTLWNGTAFNFE--TILQAHDSAIRALKWASNEQWLLSA 193
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQD-VKKVRFHPFDNILASASYDDTVKLFKEDKA 218
+ V W+ + A + +AH + ++ + F P D A+AS D T +++ D A
Sbjct: 194 DQGGYVKYWQPNMNN----AHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVW--DFA 247
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT--VKIWKEYKPGNSAGIPTPDND 276
+ L+ H + V + + +AT S D VKIW + K G+
Sbjct: 248 R--YTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIW-DPKSGSCLATLQEHKS 304
Query: 277 SVWKCVCTLSGHH----GRT----IYDISW--------CHLTDLIATACGDDAIRIFKEN 320
SV +G+ GR +YDI H ++I+ A +F
Sbjct: 305 SVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSG 364
Query: 321 PEAGDSDMVSF------DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
GD +V + ++ EH AH+Q + + W+P+ +LA+ S+D + K W
Sbjct: 365 --GGDGSIVYWMVDGEKEIGLLEH-AHDQAIWSMKWHPL-GHILATGSNDNNTKFW 416
Score = 55 (24.4 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 289 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 341
H + I+ + W L ++AT D+ + + N GD+ F L +T H
Sbjct: 388 HDQAIWSMKWHPLGHILATGSNDNNTKFWARN-RPGDTVEDIFGLSNTNMIGH 439
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 197 (74.4 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 57/190 (30%), Positives = 95/190 (50%)
Query: 39 EMINSQTLKG--------HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA 90
E IN ++LK H+ V++ ++ I+SCG DK ++++ ES G +
Sbjct: 595 EWINKKSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAES-GERLLE-- 651
Query: 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150
+S H I +S ++A+ S D +W+ R+G+ C E H +V ++
Sbjct: 652 -IS-AHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGK--CLYVYEEHTEQVNCCQFN 707
Query: 151 -KNGQFL-ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208
+ GQ+L ATCS D + +W++ +D+Y C + H+ V RF P D+ +AS S D
Sbjct: 708 NRRGQYLLATCSDDTYIKLWDL--KDKY-CRNTMFGHVNAVSHCRFSPNDDYIASCSTDG 764
Query: 209 TVKLFKEDKA 218
TVKL+ A
Sbjct: 765 TVKLWNVHSA 774
Score = 132 (51.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 54/211 (25%), Positives = 93/211 (44%)
Query: 60 PQGTMISSC--GEDKNIRLWGKESFGNK----FTAKAILS-DGHQRTIRETAWSP-CGNF 111
PQ ++I C ED +G+E+ K + + S + ++ +++ ++ C
Sbjct: 961 PQESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTL 1020
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV- 170
I+SA DA VW+ + EC L+GH+ +K + +N + L+ S D +V VW +
Sbjct: 1021 ISSAH-DAVIQVWNWQLN--EC-VFLKGHKEAIKDFAFLENSKLLSW-SFDGTVKVWNIT 1075
Query: 171 -GE-EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL 228
G+ E ++ C H V P + +S S D T K++ + + L
Sbjct: 1076 TGKTEKDFAC------HRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSV----LHEL 1125
Query: 229 KSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
K H + V AF LAT D ++IW
Sbjct: 1126 KGHEACVRCSAFSPSNKLLATGDDKGDIRIW 1156
Score = 125 (49.1 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 59/293 (20%), Positives = 116/293 (39%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI-LSDGHQRTIRETA 104
+ H + +++ +++C DK +++W N T K + + + H +
Sbjct: 652 ISAHDDEILCCTFSADDKYVATCSADKKVKIW------NSRTGKCLYVYEEHTEQVNCCQ 705
Query: 105 WSPC-GNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
++ G ++ A+ S D +WD + C T+ GH N V +S N ++A+CS D
Sbjct: 706 FNNRRGQYLLATCSDDTYIKLWDLKDKY--CRNTMFGHVNAVSHCRFSPNDDYIASCSTD 763
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQ-DVKKVRFHPFDNILASASYDDTVKLFKEDKA--- 218
+V +W V +E + + D ++ + + DT+ + ++K
Sbjct: 764 GTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLF 823
Query: 219 EADWINFAT--LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276
+ N T + SH ST+ F +A ++++W N +
Sbjct: 824 DVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELW------NIKSL-----S 872
Query: 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 329
V C GH ++ +++ L T+ D IRI++ N SD V
Sbjct: 873 KVADC----RGHTS-WVHCVTFSSDGSLFLTSSEDQTIRIWETNKVCKSSDAV 920
Score = 83 (34.3 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD---LVHTEHRAHNQDVN 346
G+T D + CH +++ A D R F + + SF+ ++H E + H V
Sbjct: 1077 GKTEKDFA-CHRGAVLSCAVSPDGSR-FSSTSADKTAKIWSFESSSVLH-ELKGHEACVR 1133
Query: 347 CVAWNPVVPGMLASCSDDGDVKLWQI 372
C A++P +LA+ D GD+++W I
Sbjct: 1134 CSAFSPSNK-LLATGDDKGDIRIWDI 1158
Score = 62 (26.9 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 358 LASCSDDGDVKLWQIKLEN 376
+ASCS DG VKLW + N
Sbjct: 757 IASCSTDGTVKLWNVHSAN 775
Score = 42 (19.8 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 358 LASCSDDGDVKLWQI 372
L S S DG VK+W I
Sbjct: 1060 LLSWSFDGTVKVWNI 1074
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 197 (74.4 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 57/190 (30%), Positives = 95/190 (50%)
Query: 39 EMINSQTLKG--------HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA 90
E IN ++LK H+ V++ ++ I+SCG DK ++++ ES G +
Sbjct: 596 EWINKKSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAES-GERLLE-- 652
Query: 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150
+S H I +S ++A+ S D +W+ R+G+ C E H +V ++
Sbjct: 653 -IS-AHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGK--CLYVYEEHTEQVNCCQFN 708
Query: 151 -KNGQFL-ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208
+ GQ+L ATCS D + +W++ +D+Y C + H+ V RF P D+ +AS S D
Sbjct: 709 NRRGQYLLATCSDDTYIKLWDL--KDKY-CRNTMFGHVNAVSHCRFSPNDDYIASCSTDG 765
Query: 209 TVKLFKEDKA 218
TVKL+ A
Sbjct: 766 TVKLWNVHSA 775
Score = 132 (51.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 54/211 (25%), Positives = 93/211 (44%)
Query: 60 PQGTMISSC--GEDKNIRLWGKESFGNK----FTAKAILS-DGHQRTIRETAWSP-CGNF 111
PQ ++I C ED +G+E+ K + + S + ++ +++ ++ C
Sbjct: 962 PQESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTL 1021
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV- 170
I+SA DA VW+ + EC L+GH+ +K + +N + L+ S D +V VW +
Sbjct: 1022 ISSAH-DAVIQVWNWQLN--EC-VFLKGHKEAIKDFAFLENSKLLSW-SFDGTVKVWNIT 1076
Query: 171 -GE-EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL 228
G+ E ++ C H V P + +S S D T K++ + + L
Sbjct: 1077 TGKTEKDFAC------HRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSV----LHEL 1126
Query: 229 KSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
K H + V AF LAT D ++IW
Sbjct: 1127 KGHEACVRCSAFSPSNKLLATGDDKGDIRIW 1157
Score = 125 (49.1 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 59/293 (20%), Positives = 116/293 (39%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI-LSDGHQRTIRETA 104
+ H + +++ +++C DK +++W N T K + + + H +
Sbjct: 653 ISAHDDEILCCTFSADDKYVATCSADKKVKIW------NSRTGKCLYVYEEHTEQVNCCQ 706
Query: 105 WSPC-GNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
++ G ++ A+ S D +WD + C T+ GH N V +S N ++A+CS D
Sbjct: 707 FNNRRGQYLLATCSDDTYIKLWDLKDKY--CRNTMFGHVNAVSHCRFSPNDDYIASCSTD 764
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQ-DVKKVRFHPFDNILASASYDDTVKLFKEDKA--- 218
+V +W V +E + + D ++ + + DT+ + ++K
Sbjct: 765 GTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLF 824
Query: 219 EADWINFAT--LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276
+ N T + SH ST+ F +A ++++W N +
Sbjct: 825 DVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELW------NIKSL-----S 873
Query: 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 329
V C GH ++ +++ L T+ D IRI++ N SD V
Sbjct: 874 KVADC----RGHTS-WVHCVTFSSDGSLFLTSSEDQTIRIWETNKVCKSSDAV 921
Score = 83 (34.3 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD---LVHTEHRAHNQDVN 346
G+T D + CH +++ A D R F + + SF+ ++H E + H V
Sbjct: 1078 GKTEKDFA-CHRGAVLSCAVSPDGSR-FSSTSADKTAKIWSFESSSVLH-ELKGHEACVR 1134
Query: 347 CVAWNPVVPGMLASCSDDGDVKLWQI 372
C A++P +LA+ D GD+++W I
Sbjct: 1135 CSAFSPSNK-LLATGDDKGDIRIWDI 1159
Score = 62 (26.9 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 358 LASCSDDGDVKLWQIKLEN 376
+ASCS DG VKLW + N
Sbjct: 758 IASCSTDGTVKLWNVHSAN 776
Score = 42 (19.8 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 358 LASCSDDGDVKLWQI 372
L S S DG VK+W I
Sbjct: 1061 LLSWSFDGTVKVWNI 1075
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 226 (84.6 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 66/215 (30%), Positives = 98/215 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L+GH G V++ + + + SC ED +IR W SF N +L GH + +
Sbjct: 356 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTN-----TVLYQGHAYPVWDLDI 410
Query: 106 SPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
SP + AS S D T +W R+ A GH +V V + N +LAT S DK+
Sbjct: 411 SPYSLYFASGSHDRTARLWSFDRTYPLRIYA---GHLADVDCVKFHPNSNYLATGSTDKT 467
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W + + + H V + F P LASA D +KL+ D A
Sbjct: 468 VRLWSAQQGNSVR---LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW--DLASGTL-- 520
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ L+ HT + SL F S +A+ S D +V++W
Sbjct: 521 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVW 555
Score = 194 (73.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 45/172 (26%), Positives = 85/172 (49%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N+ +GH VW++ +P +S D+ RLW SF + + + GH +
Sbjct: 394 NTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLW---SFDRTYPLR--IYAGHLADVD 448
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ P N++A+ S D T +W + G T GH V S+ +S NG++LA+
Sbjct: 449 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT--GHRGPVLSLAFSPNGKYLASAGE 506
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
D+ + +W++ Y+ + H ++ + F P +++ASAS D++V+++
Sbjct: 507 DQRLKLWDLASGTLYK---ELRGHTDNITSLTFSPDSSLIASASMDNSVRVW 555
Score = 173 (66.0 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH V V ++P +++ DK +RLW + GN L GH+ + A+SP
Sbjct: 442 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GNSVR----LFTGHRGPVLSLAFSP 496
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G ++ASA D +WD SG L GH + + S+T+S + +A+ S D SV V
Sbjct: 497 NGKYLASAGEDQRLKLWDLASGTLY--KELRGHTDNITSLTFSPDSSLIASASMDNSVRV 554
Query: 168 WEV 170
W++
Sbjct: 555 WDI 557
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 51/176 (28%), Positives = 76/176 (43%)
Query: 84 NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE 143
N T IL GH + T + + + S S D + WD G F +GH
Sbjct: 348 NAGTEMKILR-GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYP 404
Query: 144 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203
V + S + A+ S D++ +W D + H+ DV V+FHP N LA+
Sbjct: 405 VWDLDISPYSLYFASGSHDRTARLWSF---DRTYPLRIYAGHLADVDCVKFHPNSNYLAT 461
Query: 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
S D TV+L+ + + + T H V SLAF G LA+ +D +K+W
Sbjct: 462 GSTDKTVRLWSAQQGNS--VRLFT--GHRGPVLSLAFSPNGKYLASAGEDQRLKLW 513
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 42 NSQTL-KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
NS L GH+G V +++++P G ++S GED+ ++LW S G + K + GH I
Sbjct: 477 NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS-GTLY--KELR--GHTDNI 531
Query: 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV 147
+SP + IASAS D + VWD R+ C+ +G E+ V
Sbjct: 532 TSLTFSPDSSLIASASMDNSVRVWDIRNTY--CSTPADGSSGELVGV 576
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 222 (83.2 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 64/211 (30%), Positives = 103/211 (48%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH+ V V+++P G +++S DK +R+W G +A H T+R +
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRA-----HTATVRSVHFCS 113
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G + +AS D T VW +F + L H N V+ +S +G+ + + S DK+V +
Sbjct: 114 DGQSLVTASDDKTVKVWSTHRQKFLFS--LSQHINWVRCARFSPDGRLIVSASDDKTVKL 171
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 227
W+ + EC H V V FHP +A+AS D+TVK++ D +
Sbjct: 172 WD---KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVW--DVRTHRLLQHYQ 226
Query: 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
L H++ V +L+F G+ L T S D+T+KI
Sbjct: 227 L--HSAAVNALSFHPSGNYLLTASSDSTLKI 255
Score = 216 (81.1 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 66/218 (30%), Positives = 94/218 (43%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S + H V +V + G + + +DK +++W KF LS H +R
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR--QKFLFS--LSQ-HINWVRC 150
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G I SAS D T +WDK S EC + H V V + +G +A S D
Sbjct: 151 ARFSPDGRLIVSASDDKTVKLWDKTSR--ECVHSYCEHGGFVTYVDFHPSGTCIAAASMD 208
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+V VW+V + H V + FHP N L +AS D T+K+ D E
Sbjct: 209 NTVKVWDVRT---HRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKIL--DLMEGRL 263
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
+ TL H ++AF R G A+ D V +WK
Sbjct: 264 LY--TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 207 (77.9 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 62/214 (28%), Positives = 101/214 (47%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH+ + +V ++ ++S D + +W K ++A GH+ + +S
Sbjct: 16 KGHRDAITSVDFSLNTKQLASGSMDSCLMVWHM-----KPQSRAYRFAGHKDAVTCVNFS 70
Query: 107 PCGNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
P G+ +AS S D T +W G+ + H V+SV + +GQ L T S DK+V
Sbjct: 71 PSGHLLASGSRDKTVRIWIPNVKGE---STVFRAHTATVRSVHFCSDGQSLVTASDDKTV 127
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
VW + + ++ HI V+ RF P ++ SAS D TVKL+ DK + ++
Sbjct: 128 KVWSTHRQ---KFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLW--DKTSRECVH- 181
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ H V + F G+ +A S D TVK+W
Sbjct: 182 -SYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVW 214
Score = 162 (62.1 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 44/128 (34%), Positives = 67/128 (52%)
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE-YECAAVINAHIQDVKKVRFHP 196
+GH + + SV +S N + LA+ S D + VW + + Y A H V V F P
Sbjct: 16 KGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAG----HKDAVTCVNFSP 71
Query: 197 FDNILASASYDDTVKLFKED-KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255
++LAS S D TV+++ + K E+ ++HT+TV S+ F G L T SDD T
Sbjct: 72 SGHLLASGSRDKTVRIWIPNVKGES-----TVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 256 VKIWKEYK 263
VK+W ++
Sbjct: 127 VKVWSTHR 134
Score = 153 (58.9 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 37/137 (27%), Positives = 66/137 (48%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC 108
H G V V ++P GT I++ D +++W + ++ L H + ++ P
Sbjct: 186 HGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRT--HRLLQHYQL---HSAAVNALSFHPS 240
Query: 109 GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168
GN++ +AS D+T + D G+ TL GH+ +V +S+ G++ A+ D+ V VW
Sbjct: 241 GNYLLTASSDSTLKILDLMEGRLLY--TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Query: 169 EVGEEDEYECAAVINAH 185
+ D + VI H
Sbjct: 299 K-SNFDVVDYREVIKVH 314
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 226 (84.6 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 54/155 (34%), Positives = 83/155 (53%)
Query: 28 TGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG-KESFGNKF 86
T + + LC E ++T GHQG V V W+P G++++SC +D ++W K+S
Sbjct: 426 TDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQS----- 480
Query: 87 TAKAILSDGHQRTIRETAWSPCG---N------FIASASFDATTAVWDKRSGQFECNATL 137
T L + H + I WSP G N +ASASFD+T +WD G+ C+
Sbjct: 481 TFVHDLRE-HTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCS--F 537
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172
GH V S+ +S NG+++A+ S DKS+ +W + E
Sbjct: 538 NGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKE 572
Score = 202 (76.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 73/293 (24%), Positives = 135/293 (46%)
Query: 41 INSQTLKGHQGR-------VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS 93
IN+ LK +G+ V + WN +GT++++ D R+W G + LS
Sbjct: 308 INALILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLN--GELIST---LS 362
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 153
H+ I W+ G+++ + S D T VWD ++ +++ E H V W N
Sbjct: 363 K-HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWK--QQFEFHSGPTLDVDWRNNV 419
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
F AT S D +++ ++GE A H +V V++ P ++LAS S D T K++
Sbjct: 420 SF-ATSSTDSMIYLCKIGETRP---AKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIW 475
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGS---------RLATCSDDATVKIWKEYKP 264
+ ++ +++ L+ HT ++++ + G LA+ S D+TVK+W
Sbjct: 476 --NIKQSTFVH--DLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLW----- 526
Query: 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 317
D + + K +C+ +GH +Y +++ + IA+ D +I I+
Sbjct: 527 ---------DAE-LGKMLCSFNGHR-EPVYSLAFSPNGEYIASGSLDKSIHIW 568
Score = 199 (75.1 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 62/227 (27%), Positives = 101/227 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG--KESFGNKFTAK---AIL-------S 93
L+GH V +W+P ++++S D R+W + SF T + A++ S
Sbjct: 261 LEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKS 320
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 153
+ + + W+ G +A+ S D +W E +TL H+ + S+ W+K G
Sbjct: 321 NEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNG---ELISTLSKHKGPIFSLKWNKKG 377
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI-LASASYDDTVKL 212
+L T S D++ VW+V E E H V + +N+ A++S D + L
Sbjct: 378 DYLLTGSVDRTAVVWDVKAE---EWKQQFEFHSGPTLDVDWR--NNVSFATSSTDSMIYL 432
Query: 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
K + T H V + +D GS LA+CSDD+T KIW
Sbjct: 433 CKIGETRPA----KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIW 475
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 59/226 (26%), Positives = 100/226 (44%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q + H G +V W + +S D I L G AK GHQ +
Sbjct: 401 QQFEFHSGPTLDVDWRNNVSFATS-STDSMIYLC---KIGETRPAKTFT--GHQGEVNCV 454
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG--------QF 155
W P G+ +AS S D+T +W+ + F + L H E+ ++ WS G Q
Sbjct: 455 KWDPTGSLLASCSDDSTAKIWNIKQSTFVHD--LREHTKEIYTIRWSPTGPGTNNPNKQL 512
Query: 156 -LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF- 213
LA+ S D +V +W+ E + C+ N H + V + F P +AS S D ++ ++
Sbjct: 513 TLASASFDSTVKLWDA-ELGKMLCS--FNGHREPVYSLAFSPNGEYIASGSLDKSIHIWS 569
Query: 214 -KEDKAEADWINFATLKSHTST--VWSLAFDRIGSRLATCSDDATV 256
KE K +K++T ++ + +++ G+++A C D +V
Sbjct: 570 IKEGKI---------VKTYTGNGGIFEVCWNKEGNKIAACFADNSV 606
Score = 138 (53.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 37/132 (28%), Positives = 59/132 (44%)
Query: 46 LKGHQGRVWNVSWNPQGT---------MISSCGEDKNIRLWGKESFGNKFTAKAILS-DG 95
L+ H ++ + W+P G ++S D ++LW E K + S +G
Sbjct: 486 LREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAE------LGKMLCSFNG 539
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
H+ + A+SP G +IAS S D + +W + G+ T G + V W+K G
Sbjct: 540 HREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGG---IFEVCWNKEGNK 596
Query: 156 LATCSRDKSVWV 167
+A C D SV V
Sbjct: 597 IAACFADNSVCV 608
>DICTYBASE|DDB_G0277257 [details] [associations]
symbol:DDB_G0277257 "Nucleoporin SEH1" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277257 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000019 KO:K14299 RefSeq:XP_642765.1
ProteinModelPortal:Q86K39 STRING:Q86K39 EnsemblProtists:DDB0169145
GeneID:8620954 KEGG:ddi:DDB_G0277257 InParanoid:Q86K39 OMA:TELEDHI
Uniprot:Q86K39
Length = 467
Score = 172 (65.6 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 51/187 (27%), Positives = 95/187 (50%)
Query: 92 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWS 150
LS H I + ++ G +A+ S D VWD+ Q +E +A + H V + W+
Sbjct: 7 LSTAHDDLIHDVSYDFYGKRLATCSSDQKIKVWDQNDNQKWELSAEWKAHSGSVWKLAWA 66
Query: 151 --KNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD----VKKVRFHP--FDNILA 202
+ GQ +A+CS D++V +WE E+++ + + AH+ D V ++F P F LA
Sbjct: 67 HPEYGQVIASCSFDRTVCIWEESEDEKGQKKWQLKAHLVDSRDSVTDIKFAPKSFGLRLA 126
Query: 203 SASYDDTVKLFKE-DKAE-ADWI---NFATLKSHTSTV-WS-LAFDRIGSRLATCSDDAT 255
+ S D +++++ D + W F + K ++ + W+ ++D+ +A S++
Sbjct: 127 TCSSDGYIRIYEAMDIMNLSQWTIVEEFESQKGTSNCISWNPSSYDK--PMIAVGSNEPY 184
Query: 256 VKIWKEY 262
+KIW EY
Sbjct: 185 IKIW-EY 190
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 53/194 (27%), Positives = 90/194 (46%)
Query: 184 AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF--D 241
AH + V + + LA+ S D +K++ ++ + W A K+H+ +VW LA+
Sbjct: 10 AHDDLIHDVSYDFYGKRLATCSSDQKIKVWDQNDNQK-WELSAEWKAHSGSVWKLAWAHP 68
Query: 242 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 301
G +A+CS D TV IW+E + + G W+ L ++ DI +
Sbjct: 69 EYGQVIASCSFDRTVCIWEESE--DEKG------QKKWQLKAHLVDSRD-SVTDIKFAPK 119
Query: 302 T-DL-IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV--PGM 357
+ L +AT D IRI+ EA D +S + E + NC++WNP M
Sbjct: 120 SFGLRLATCSSDGYIRIY----EAMDIMNLSQWTIVEEFESQKGTSNCISWNPSSYDKPM 175
Query: 358 LASCSDDGDVKLWQ 371
+A S++ +K+W+
Sbjct: 176 IAVGSNEPYIKIWE 189
Score = 139 (54.0 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 47/206 (22%), Positives = 95/206 (46%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H + +VS++ G +++C D+ I++W + K+ A H ++ + AW+ P
Sbjct: 11 HDDLIHDVSYDFYGKRLATCSSDQKIKVWDQND-NQKWELSAEWK-AHSGSVWKLAWAHP 68
Query: 108 -CGNFIASASFDATTAVWDK---RSGQ--FECNATLEGHENEVKSVTWSKN--GQFLATC 159
G IAS SFD T +W++ GQ ++ A L + V + ++ G LATC
Sbjct: 69 EYGQVIASCSFDRTVCIWEESEDEKGQKKWQLKAHLVDSRDSVTDIKFAPKSFGLRLATC 128
Query: 160 SRDKSVWVWE---VGEEDEYECAAVINAHIQDVKKVRFHP--FDN-ILASASYDDTVKLF 213
S D + ++E + ++ + + ++P +D ++A S + +K++
Sbjct: 129 SSDGYIRIYEAMDIMNLSQWTIVEEFESQKGTSNCISWNPSSYDKPMIAVGSNEPYIKIW 188
Query: 214 KEDKAEADWINFATLKSHT--STVWS 237
+ + W+ TL ++ ST+ S
Sbjct: 189 EYSETARKWLQIDTLTAYPIGSTISS 214
Score = 125 (49.1 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 39/153 (25%), Positives = 75/153 (49%)
Query: 230 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289
+H + +++D G RLATCS D +K+W + N DN W+ H
Sbjct: 10 AHDDLIHDVSYDFYGKRLATCSSDQKIKVWDQ----N-------DNQK-WELSAEWKAHS 57
Query: 290 GRTIYDISWCH--LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD-VN 346
G +++ ++W H +IA+ D + I++E+ + + + L H ++D V
Sbjct: 58 G-SVWKLAWAHPEYGQVIASCSFDRTVCIWEESED--EKGQKKWQL--KAHLVDSRDSVT 112
Query: 347 CVAWNPVVPGM-LASCSDDGDVKLWQ-IKLENL 377
+ + P G+ LA+CS DG +++++ + + NL
Sbjct: 113 DIKFAPKSFGLRLATCSSDGYIRIYEAMDIMNL 145
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 42/149 (28%), Positives = 70/149 (46%)
Query: 48 GHQGRVWNVSWNPQGTMISSC--GEDKNIRLW-GKESF--GNKFTAKAILSDGHQRTIRE 102
G+ G + N+S N G +S G + +I + G S N F + SDG R I +
Sbjct: 311 GNIGSLNNISGNSGGLNSNSLMSGANSSINVSSGNNSIYSNNNFDSS---SDGGSRAIHD 367
Query: 103 TAWSP-CG---NFIASASFDATTAVWDKRS--GQFECNATL--EGHENEVKSVTWSKNGQ 154
W+P G + IA+AS D +W S + E + + H++EV V W+ G
Sbjct: 368 VCWAPNMGRSYHLIATASKDHKVRIWKLSSDKSKMELKEVMRKDDHKSEVWRVEWNITGT 427
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVIN 183
LA+ D +V +W+ E++ ++I+
Sbjct: 428 ILASSGDDGNVCLWKCNMNGEWKLFSLIS 456
Score = 107 (42.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 32/140 (22%), Positives = 63/140 (45%)
Query: 47 KGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLWGK---ESFGNKFTAKAILSDGHQRTIR 101
K H G VW ++W +P+ G +I+SC D+ + +W + E K+ KA L D ++
Sbjct: 54 KAHSGSVWKLAWAHPEYGQVIASCSFDRTVCIWEESEDEKGQKKWQLKAHLVDSRD-SVT 112
Query: 102 ETAWSP--CGNFIASASFDATTAVWDKRS----GQFECNATLEGHENEVKSVTWSKNGQ- 154
+ ++P G +A+ S D +++ Q+ E + ++W+ +
Sbjct: 113 DIKFAPKSFGLRLATCSSDGYIRIYEAMDIMNLSQWTIVEEFESQKGTSNCISWNPSSYD 172
Query: 155 --FLATCSRDKSVWVWEVGE 172
+A S + + +WE E
Sbjct: 173 KPMIAVGSNEPYIKIWEYSE 192
Score = 97 (39.2 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 291 RTIYDISWC----HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN 346
R I+D+ W LIATA D +RI+K + + S M +++ + H +V
Sbjct: 363 RAIHDVCWAPNMGRSYHLIATASKDHKVRIWKLSSDK--SKMELKEVMRKDD--HKSEVW 418
Query: 347 CVAWNPVVPGMLASCSDDGDVKLWQIKL 374
V WN + +LAS DDG+V LW+ +
Sbjct: 419 RVEWN-ITGTILASSGDDGNVCLWKCNM 445
Score = 91 (37.1 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 199 NILASASYDDTVKLFK--EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
+++A+AS D V+++K DK++ + H S VW + ++ G+ LA+ DD V
Sbjct: 379 HLIATASKDHKVRIWKLSSDKSKMELKEVMRKDDHKSEVWRVEWNITGTILASSGDDGNV 438
Query: 257 KIWK 260
+WK
Sbjct: 439 CLWK 442
Score = 50 (22.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 21/86 (24%), Positives = 36/86 (41%)
Query: 236 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD 295
W+ R +AT S D V+IWK + + + K V H ++
Sbjct: 370 WAPNMGRSYHLIATASKDHKVRIWK---------LSSDKSKMELKEVMRKDDHKSE-VWR 419
Query: 296 ISWCHLTDLIATACGDDA-IRIFKEN 320
+ W ++T I + GDD + ++K N
Sbjct: 420 VEW-NITGTILASSGDDGNVCLWKCN 444
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 227 (85.0 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 66/255 (25%), Positives = 116/255 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L+GH V + + G +++ +D +RLW N + + + GH ++ A
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFT-GHTASVTAVAL 418
Query: 106 SPCG-----NFIASASFDATTAVWDKRS----GQFECNA--TLEGHENEVKSVTWSKNGQ 154
P F+AS+S D T ++ S F A T++ H+ +V ++ SK+G+
Sbjct: 419 GPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGR 478
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
+A+ S+DK++ +W+ E V+ H + V F+PF LAS S D T++++
Sbjct: 479 IIASASQDKTIKLWD---SSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWN 535
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274
D + TL+ HT + L + G+++ + + D VK+W G + T D
Sbjct: 536 VDTQQC----VQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWS-LSSGEC--VATLD 588
Query: 275 N--DSVWKCVCTLSG 287
N D VW G
Sbjct: 589 NHEDRVWALASRFDG 603
Score = 214 (80.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 65/222 (29%), Positives = 104/222 (46%)
Query: 48 GHQGRVWNVSWNP---QG--TMISSCGEDKNIRLWGKESFGNK--FTAKAILS-DGHQRT 99
GH V V+ P G T ++S +D+ ++ + S NK F+ +A+ + H R
Sbjct: 408 GHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRD 467
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
+ S G IASAS D T +WD +G E L GH V + +++ + LA+
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLWDSSTG--EVVGVLRGHRRGVWACSFNPFSRQLASG 525
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
S D+++ +W V D +C + H + K+ + + SA+ D VK++ E
Sbjct: 526 SGDRTIRIWNV---DTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGE 582
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261
ATL +H VW+LA GS L + DA V +WK+
Sbjct: 583 C----VATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKD 620
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 49/172 (28%), Positives = 81/172 (47%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T+K H V + + G +I+S +DK I+LW S G +L GH+R + +
Sbjct: 460 TIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDS-STGE---VVGVLR-GHRRGVWACS 514
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
++P +AS S D T +W+ + Q C TLEGH + + + G + + + D
Sbjct: 515 FNPFSRQLASGSGDRTIRIWNVDTQQ--CVQTLEGHTGAILKLIYISQGTQVVSAAADGL 572
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKE 215
V VW + EC A ++ H V + FD ++L S D V ++K+
Sbjct: 573 VKVWSLSSG---ECVATLDNHEDRVWALASR-FDGSLLVSGGADAVVSVWKD 620
Score = 142 (55.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 38/163 (23%), Positives = 77/163 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+++K H+ V ++ +P T++++ G + +++W + + GH I
Sbjct: 97 KSMKAHETPVITMTIDPTNTLLATGGAEGLVKVW---DIAGAYVTHSFR--GHGGVISAL 151
Query: 104 AWSPCGN--FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ N +AS + D+ +WD S + A EGH + ++ +T+ G FL + SR
Sbjct: 152 CFGKHQNTWVLASGADDSRVRLWDLNSSR--SMAVFEGHSSVIRGLTFEPTGSFLLSGSR 209
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204
DK+V VW + + V ++ ++ + V P + IL +A
Sbjct: 210 DKTVQVWNIKKRSAVRTIPVFHS-VEAIGWVNGQPEEKILYTA 251
Score = 140 (54.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 76/335 (22%), Positives = 140/335 (41%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW- 105
+GH + +++ P G+ + S DK +++W + K +A + H ++ W
Sbjct: 186 EGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIK----KRSAVRTIPVFH--SVEAIGWV 239
Query: 106 --SPCGNFIASASFDATTAVWDKRSG-QFECNA-TLEGHENEV-KSVTWSKNGQFLATCS 160
P + +A WD +SG + + T N + + V +S+N L +
Sbjct: 240 NGQPEEKILYTAGEGNLILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFSENT--LLSVH 297
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 220
D S+ + + + + +N +V + D+ LA S + + + D +
Sbjct: 298 SDLSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDH-LAVCSNTEFIDVISTDGTQV 356
Query: 221 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280
F L+ HT V +L G LAT + D TV++W + I D+V+K
Sbjct: 357 ----FGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLW-------NLNI----EDNVYK 401
Query: 281 CVCTLSGHHGR-TIYDISWCHLTD---LIATACGDDAIRIFKENPEAGDSDMVSFDLVHT 336
C+ +GH T + + +A++ D ++ F + SD S V T
Sbjct: 402 CIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDF-SNRAVWT 460
Query: 337 EHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLW 370
+AH++DVN + + G ++AS S D +KLW
Sbjct: 461 I-KAHDRDVNAIQVSK--DGRIIASASQDKTIKLW 492
Score = 65 (27.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 22/96 (22%), Positives = 43/96 (44%)
Query: 227 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 286
TL+ HT + L + G+++ + + D VK+W S+G +CV TL
Sbjct: 544 TLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSL-----SSG----------ECVATLD 588
Query: 287 GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322
H R ++ ++ L+ + D + ++K+ E
Sbjct: 589 NHEDR-VWALASRFDGSLLVSGGADAVVSVWKDVTE 623
Score = 42 (19.8 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 358 LASCSDDGDVKLWQIKLEN 376
LA+ + D V+LW + +E+
Sbjct: 379 LATGAKDNTVRLWNLNIED 397
Score = 39 (18.8 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 23/99 (23%), Positives = 42/99 (42%)
Query: 275 NDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 334
+ S + V L GH R ++ S+ + +A+ GD IRI+ + + V
Sbjct: 493 DSSTGEVVGVLRGHR-RGVWACSFNPFSRQLASGSGDRTIRIWNVDTQ---------QCV 542
Query: 335 HTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQI 372
T H + + + + G + S + DG VK+W +
Sbjct: 543 QTLE-GHTGAILKLIY--ISQGTQVVSAAADGLVKVWSL 578
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 212 (79.7 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 65/223 (29%), Positives = 111/223 (49%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+ LKGH V G I S +D +++W S N + ++ GH + +
Sbjct: 988 KVLKGHDDHVITCL-QFSGNRIVSGSDDNTLKVW---SAVNGKCLRTLV--GHTGGVWSS 1041
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
S GN I S S D T VWD SG C TL+GH + V+ + +G + + SRD
Sbjct: 1042 QMS--GNIIISGSTDRTLKVWDMDSGA--CVHTLQGHTSTVRCM--HLHGSKVVSGSRDA 1095
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
++ VW++ ++ C V+ H+ V+ V++ ++ S +YD VK++ ++ E
Sbjct: 1096 TLRVWDI---EQGSCLHVLVGHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPERQEC--- 1147
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
TL+ HT+ V+SL FD G + + S D ++++W + + GN
Sbjct: 1148 -LHTLQGHTNRVYSLQFD--GLHVVSGSLDTSIRVW-DVETGN 1186
Score = 150 (57.9 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 51/173 (29%), Positives = 78/173 (45%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH +R + G I S ++D +W + EC TL+GH N V S+ + +G
Sbjct: 1113 GHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPE--RQECLHTLQGHTNRVYSLQF--DGL 1166
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
+ + S D S+ VW+V + C + H + NIL S + D TVK++
Sbjct: 1167 HVVSGSLDTSIRVWDV---ETGNCKHTLMGHQSLTSGMELR--QNILVSGNADSTVKVWD 1221
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKEYKPGN 266
+ + H S V L F+ SR + T SDD TVK+W + K G+
Sbjct: 1222 ITTGQC-LQTLSGPNKHHSAVTCLQFN---SRFVVTSSDDGTVKLW-DVKTGD 1269
Score = 140 (54.3 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 44/131 (33%), Positives = 66/131 (50%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH RV+++ ++ G + S D +IR+W E+ GN K L GHQ +
Sbjct: 1150 TLQGHTNRVYSLQFD--GLHVVSGSLDTSIRVWDVET-GN---CKHTLM-GHQSLT--SG 1200
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDK 163
N + S + D+T VWD +GQ C TL G +VT + N +F+ T S D
Sbjct: 1201 MELRQNILVSGNADSTVKVWDITTGQ--CLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDG 1258
Query: 164 SVWVWEVGEED 174
+V +W+V D
Sbjct: 1259 TVKLWDVKTGD 1269
Score = 65 (27.9 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
H+ V C+ +N + + SDDG VKLW +K
Sbjct: 1237 HHSAVTCLQFNS---RFVVTSSDDGTVKLWDVK 1266
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 180 (68.4 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 54/182 (29%), Positives = 86/182 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++ H V++ ++ G I+SCG DK ++++ E+ KA H+ + A+
Sbjct: 611 VRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKA-----HEDEVLCCAF 665
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWSKNGQFLATCSRDK 163
S FIA+ S D +W+ +G E T + H +V T S + LAT S D
Sbjct: 666 STDDRFIATCSVDKKVKIWNSMTG--ELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDC 723
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA-EADW 222
+ +W++ ++ EC + H V RF P D +LAS S D T+KL+ A E
Sbjct: 724 FLKLWDLNQK---ECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKS 780
Query: 223 IN 224
IN
Sbjct: 781 IN 782
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 50/166 (30%), Positives = 77/166 (46%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
H + +S G IAS D T V+ +G E ++ HE+EV +S + +F
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETG--EKLLEIKAHEDEVLCCAFSTDDRF 671
Query: 156 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN--ILASASYDDTVKLF 213
+ATCS DK V +W E + H + V F + +LA+ S D +KL+
Sbjct: 672 IATCSVDKKVKIWN---SMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLW 728
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
++ E N T+ HT++V F LA+CS D T+K+W
Sbjct: 729 DLNQKECR--N--TMFGHTNSVNHCRFSPDDKLLASCSADGTLKLW 770
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 67/303 (22%), Positives = 128/303 (42%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG---------QFECNAT--LEGHENE 143
GH ++ +SP +AS S D T +WD S QF N E E
Sbjct: 741 GHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQEDMEVI 800
Query: 144 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203
VK +WS +G + +++K ++++++ + H ++ F P +++
Sbjct: 801 VKCCSWSADGARIMVAAKNK-IFLFDIHTSGLL--GEIHTGHHSTIQYCDFSPQNHLAVV 857
Query: 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
A V+L+ D A + H S V + F GS T SDD T+++W+ K
Sbjct: 858 ALSQYCVELWNTDSRS----KVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKK 913
Query: 264 P-GNSAGIPTPDNDSVWKC--VCTLSGHHGRTIYDISWC-----HLTDL-IATACGDDAI 314
NSA + + D V++ V L+ H R + I+ +LT+ ++ C +
Sbjct: 914 VCKNSAVMLKQEVDVVFQENEVMVLAVDHIRRLQLINGRTGQIDYLTEAQVSCCCLSPHL 973
Query: 315 RIFKENPEAGDSDMVSF--DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
+ E G +++ + + H + V + + +++S SDD ++++W
Sbjct: 974 QYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISS-SDDAEIQVWNW 1032
Query: 373 KLE 375
+L+
Sbjct: 1033 QLD 1035
Score = 100 (40.3 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 38/167 (22%), Positives = 72/167 (43%)
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW-----------------KEYKPGNS 267
F + H TVW + F L + SDDA +++W K+++ +
Sbjct: 996 FQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIFLRGHQETVKDFRLLKN 1055
Query: 268 AGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 327
+ + + D K ++G+ + CH +++ DA + F +
Sbjct: 1056 SRLLSWSFDGTVKVWNIITGNKEKDFV----CHQGTVLSCDISHDATK-FSSTSADKTAK 1110
Query: 328 MVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
+ SFDL+ H R HN V C A++ V +LA+ D+G++++W +
Sbjct: 1111 IWSFDLLLPLHELRGHNGCVRCSAFS-VDSTLLATGDDNGEIRIWNV 1156
Score = 100 (40.3 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 32/109 (29%), Positives = 43/109 (39%)
Query: 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240
V+ H V F +AS D T+++FK + E +K+H V AF
Sbjct: 610 VVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGE----KLLEIKAHEDEVLCCAF 665
Query: 241 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289
+ATCS D VKIW G ++ V C T S HH
Sbjct: 666 STDDRFIATCSVDKKVKIWNSMT-GELVHTYDEHSEQVNCCHFTNSSHH 713
Score = 86 (35.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 39/181 (21%), Positives = 68/181 (37%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK--FTAKAI---LSDGHQRT 99
T+ GH V + ++P +++SC D ++LW S + K L D +
Sbjct: 738 TMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQEDM 797
Query: 100 ---IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
++ +WS G I A+ + SG T GH + ++ +S
Sbjct: 798 EVIVKCCSWSADGARIMVAAKNKIFLFDIHTSGLLGEIHT--GHHSTIQYCDFSPQNHLA 855
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
V +W D A H+ V V F P + ++S D T++L++
Sbjct: 856 VVALSQYCVELWNT---DSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETK 912
Query: 217 K 217
K
Sbjct: 913 K 913
Score = 68 (29.0 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 24/86 (27%), Positives = 38/86 (44%)
Query: 296 ISWCHLTD-----LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350
++ CH T+ L+AT D ++++ N + + M H VN +
Sbjct: 702 VNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFG----------HTNSVNHCRF 751
Query: 351 NPVVPGMLASCSDDGDVKLWQIKLEN 376
+P +LASCS DG +KLW N
Sbjct: 752 SPD-DKLLASCSADGTLKLWDATSAN 776
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 207 (77.9 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 56/202 (27%), Positives = 99/202 (49%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ +L+GH V +V+++P G ++S D +R W + FT K GH+ +
Sbjct: 107 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCK-----GHRHWVLS 161
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK---NGQ--FLA 157
+WSP G +AS + +WD +G+ + TL GH + ++W N + ++A
Sbjct: 162 ISWSPDGRKLASGCKNGQILLWDPSTGK-QVGRTLAGHSKWITGLSWEPLHANPECRYVA 220
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217
+ S+D SV +W+ C ++ H Q V +R+ D +L SAS D T+K+++
Sbjct: 221 SSSKDGSVRIWDTTAG---RCERILTGHTQSVTCLRWGG-DGLLYSASQDRTIKVWRAH- 275
Query: 218 AEADWINFATLKSHTSTVWSLA 239
D + TL+ H V ++A
Sbjct: 276 ---DGVLCRTLQGHGHWVNTMA 294
Score = 185 (70.2 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 83/354 (23%), Positives = 151/354 (42%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T KGH+ V ++SW+P G ++S ++ I LW + K + + GH + I +
Sbjct: 151 TCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPST--GKQVGRTLA--GHSKWITGLS 206
Query: 105 WSPC-GN----FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
W P N ++AS+S D + +WD +G+ C L GH V + W +G L +
Sbjct: 207 WEPLHANPECRYVASSSKDGSVRIWDTTAGR--CERILTGHTQSVTCLRWGGDG-LLYSA 263
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
S+D+++ VW D C + H V + D L + +++ +
Sbjct: 264 SQDRTIKVWRA--HDGVLCRT-LQGHGHWVNTMALST-DYALRTGAFEPAEASVNPQDLQ 319
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW---KEYKP-----GNSAGIP 271
+ LK + ++L + RL + SDD T+ +W ++ KP G+ A I
Sbjct: 320 G---SLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALIN 376
Query: 272 ----TPDNDSVW-----KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322
+PD+ V K + G G+ + + H+ + A D+ R+
Sbjct: 377 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRG-HVAAVYQIAWSADS-RLLVSG-- 432
Query: 323 AGDSDMVSFDL----VHTEHRAHNQDVNCVAWNPVVPGM-LASCSDDGDVKLWQ 371
+ DS + +D+ + + H +V V W+P G +AS D +++W+
Sbjct: 433 SSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSP--DGQRVASGGKDKCLRIWR 484
Score = 165 (63.1 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 45/176 (25%), Positives = 83/176 (47%)
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWD--KRSGQFECNATLEGHENEVKSVTWSK 151
+GH + A+SP G ++AS S D T WD + F C +GH + V S++WS
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----KGHRHWVLSISWSP 166
Query: 152 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-----NILASASY 206
+G+ LA+ ++ + +W+ + + H + + + + P +AS+S
Sbjct: 167 DGRKLASGCKNGQILLWDPSTGKQV--GRTLAGHSKWITGLSWEPLHANPECRYVASSSK 224
Query: 207 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262
D +V+++ + I L HT +V L + G L + S D T+K+W+ +
Sbjct: 225 DGSVRIWDTTAGRCERI----LTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAH 275
Score = 122 (48.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 46/171 (26%), Positives = 76/171 (44%)
Query: 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED-EYECAAVINAHIQDVKK 191
C ++LEGH V SV +S G++LA+ S D +V W++ E + C H V
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----KGHRHWVLS 161
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR----- 246
+ + P LAS + + L+ D + + TL H+ + L+++ + +
Sbjct: 162 ISWSPDGRKLASGCKNGQILLW--DPSTGKQVG-RTLAGHSKWITGLSWEPLHANPECRY 218
Query: 247 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 297
+A+ S D +V+IW + G I T SV C G G +Y S
Sbjct: 219 VASSSKDGSVRIW-DTTAGRCERILTGHTQSV---TCLRWGGDG-LLYSAS 264
Score = 57 (25.1 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377
R H V +AW+ +L S S D +K+W +K + L
Sbjct: 411 RGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKL 448
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 213 (80.0 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 57/206 (27%), Positives = 102/206 (49%)
Query: 54 WNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA 113
W V+++P I++ + ++G ES G K + D + I A+SP G ++A
Sbjct: 110 WTVAFSPDSKYIATGSHLGKVNIFGVES-GKKEHSL----DTRGKFILSIAYSPDGKYLA 164
Query: 114 SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 173
S + D ++D +G+ TLEGH ++S+T+S + Q L T S D + +++V
Sbjct: 165 SGAIDGIINIFDIATGKLL--HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA 222
Query: 174 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS 233
+ A ++ H V V F P D S+S D ++K++ D + +N T H
Sbjct: 223 N---LAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVW--DTSSRSCVN--TFFDHQD 275
Query: 234 TVWSLAFDRIGSRLATCSDDATVKIW 259
VWS+ ++ GS++ + DD + I+
Sbjct: 276 QVWSVKYNPTGSKIVSAGDDRAIHIY 301
Score = 183 (69.5 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 59/217 (27%), Positives = 102/217 (47%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRET 103
TL+GHQ V +V+ + G + +S D +IRLW E T K I S D
Sbjct: 59 TLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLE------TGKQIKSMDAGPVDAWTV 112
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
A+SP +IA+ S ++ SG+ E + G + S+ +S +G++LA+ + D
Sbjct: 113 AFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRG--KFILSIAYSPDGKYLASGAIDG 170
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
+ ++++ + + H ++ + F P +L +AS D +K++ A
Sbjct: 171 IINIFDIATG---KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA----- 222
Query: 224 NFA-TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
N A TL H S V S+AF + + S D ++K+W
Sbjct: 223 NLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVW 259
Score = 148 (57.2 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 57/225 (25%), Positives = 103/225 (45%)
Query: 49 HQGRVWNVSWN---PQGTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
H+ +W +W G+ G D +++W K S K + L +GHQ +
Sbjct: 15 HEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVW-KWS-DEKLELQWTL-EGHQLGVVSVN 71
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
S G AS+S DA +WD +G+ + + ++ + +V +S + +++AT S
Sbjct: 72 ISQNGAIAASSSLDAHIRLWDLETGK-QIKS-MDAGPVDAWTVAFSPDSKYIATGSHLGK 129
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V ++ V E + E + ++ + + + + P LAS + D + +F D A ++
Sbjct: 130 VNIFGV-ESGKKEHS--LDTRGKFILSIAYSPDGKYLASGAIDGIINIF--DIATGKLLH 184
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 269
TL+ H + SL F L T SDD +KI+ + + N AG
Sbjct: 185 --TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY-DVQHANLAG 226
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 30/125 (24%), Positives = 62/125 (49%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH + +++++P ++ + +D I+++ + T LS GH + A
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT----LS-GHGSWVLSVA 239
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+SP S+S D + VWD S C T H+++V SV ++ G + + D++
Sbjct: 240 FSPDDTHFVSSSSDKSIKVWDTSSRS--CVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRA 297
Query: 165 VWVWE 169
+ +++
Sbjct: 298 IHIYD 302
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 223 (83.6 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 68/226 (30%), Positives = 106/226 (46%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G + S G DK +W + G AK H +
Sbjct: 269 ASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 323
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W F AS S D V R G T +GH NEV ++ W +G LA+CS D
Sbjct: 324 VDWQNNMTF-ASCSTDMCIHVC--RLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 380
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----DN-----ILASASYDDTVKLF 213
++ +W + ++ C + AH +++ +++ P N +LASAS+D TV+L+
Sbjct: 381 MTLKIWSMKQD---ACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 437
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
++ + TL H V+S+AF G LA+ S D V IW
Sbjct: 438 DVEQG----VCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIW 479
Score = 202 (76.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 58/228 (25%), Positives = 102/228 (44%)
Query: 42 NSQT-LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL-----SDG 95
N T L+GH+ V+ +WNP +++S D R+W N + + +L G
Sbjct: 170 NKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGG 229
Query: 96 HQ----RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK 151
H + + W+ G +A S+D +W + +G +TL H+ + ++ W+K
Sbjct: 230 HDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTE-NGNLA--STLGQHKGPIFALKWNK 286
Query: 152 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVK 211
G ++ + DK+ +W+ + + +A DV F AS S D +
Sbjct: 287 KGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTF----ASCSTDMCIH 342
Query: 212 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ + D T + HT+ V ++ +D G LA+CSDD T+KIW
Sbjct: 343 VCR---LGCDH-PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 386
Score = 127 (49.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 35/134 (26%), Positives = 60/134 (44%)
Query: 46 LKGHQGRVWNVSWNPQGT---------MISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
L+ H ++ + W+P G M++S D +RLW E G ++ H
Sbjct: 397 LQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQ-G--VCTHTLMK--H 451
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
Q + A+SP G ++AS SFD +W+ +SG + +G + V W+ G +
Sbjct: 452 QEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLV--HSYQG-TGGIFEVCWNARGDKV 508
Query: 157 ATCSRDKSVWVWEV 170
+ D SV V ++
Sbjct: 509 GASASDGSVCVLDL 522
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 219 (82.2 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 54/202 (26%), Positives = 99/202 (49%)
Query: 59 NPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF 117
NP GT + + N G + G+ +GH ++I +SPCG ++ ++S
Sbjct: 48 NPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSA 107
Query: 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177
D T +W+ C TL GH+ V + WS + + + + S DK++ ++E+
Sbjct: 108 DKTVKIWNM--DHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTS---R 162
Query: 178 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS 237
+ H V F+P +++ S S+D++V+++ D I TL +H+ V +
Sbjct: 163 MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW--DVKTGMCIK--TLPAHSDPVSA 218
Query: 238 LAFDRIGSRLATCSDDATVKIW 259
++F+R GS +A+ S D V+IW
Sbjct: 219 VSFNRDGSLIASGSYDGLVRIW 240
Score = 201 (75.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 58/238 (24%), Positives = 109/238 (45%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH + + ++P G + + DK +++W + + L+ GH+ + + A
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHM----ICERTLT-GHKLGVNDIA 136
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WS + SAS D T +++ + + TL+GH N V ++ + + S D+S
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRM--TKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W+V C + AH V V F+ +++AS SYD V+++ D A I
Sbjct: 195 VRIWDVKTG---MCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW--DTANGQCIK 249
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282
+ V + F G + + D+T+K+W ++ G + T +S + C+
Sbjct: 250 -TLVDDENPPVAFVKFSPNGKYILASNLDSTLKLW-DFSKGKTLKQYTGHENSKY-CI 304
Score = 192 (72.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 53/224 (23%), Positives = 109/224 (48%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
MI +TL GH+ V +++W+ + S +DK ++++ E ++ T K + GH
Sbjct: 119 MICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIF--EIVTSRMT-KTL--KGHNNY 173
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
+ ++P + + S SFD + +WD ++G C TL H + V +V+++++G +A+
Sbjct: 174 VFCCNFNPQSSLVVSGSFDESVRIWDVKTGM--CIKTLPAHSDPVSAVSFNRDGSLIASG 231
Query: 160 SRDKSVWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
S D V +W+ +C +++ V V+F P + +++ D T+KL+ K
Sbjct: 232 SYDGLVRIWDTANG---QCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKG 288
Query: 219 EADWINFATLKSHTSTVWSLA--FDRIGSR-LATCSDDATVKIW 259
+ H ++ + + F G + + + S+D + IW
Sbjct: 289 KT----LKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIW 328
Score = 168 (64.2 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 47/178 (26%), Positives = 86/178 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL H V VS+N G++I+S D +R+W N K ++ D + +
Sbjct: 207 KTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDT---ANGQCIKTLVDDENP-PVAFV 262
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWS-KNGQFLATCS 160
+SP G +I +++ D+T +WD G+ T GHEN + +S G+++ + S
Sbjct: 263 KFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT--GHENSKYCIFANFSVTGGKWIISGS 320
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKED 216
D +++W + + +C + H Q V HP NI+AS + D+ + +++ D
Sbjct: 321 EDCKIYIWNLQTREIVQC---LEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWRSD 375
Score = 154 (59.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 41/138 (29%), Positives = 66/138 (47%)
Query: 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 187
S ++ TLEGH + S +S G++L T S DK+V +W + D C + H
Sbjct: 74 SANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM---DHMICERTLTGHKL 130
Query: 188 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247
V + + + SAS D T+K+F+ + TLK H + V+ F+ S +
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMT----KTLKGHNNYVFCCNFNPQSSLV 186
Query: 248 ATCSDDATVKIWKEYKPG 265
+ S D +V+IW + K G
Sbjct: 187 VSGSFDESVRIW-DVKTG 203
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 44/154 (28%), Positives = 68/154 (44%)
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
A++ TL+ HT ++ S F G L T S D TVKIW N
Sbjct: 75 ANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIW---------------NMDHM 119
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
C TL+GH + DI+W + + +A D ++IF ++V+ + T +
Sbjct: 120 ICERTLTGHK-LGVNDIAWSSDSRCVVSASDDKTLKIF---------EIVTSRMTKTL-K 168
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
HN V C +NP ++ S S D V++W +K
Sbjct: 169 GHNNYVFCCNFNPQ-SSLVVSGSFDESVRIWDVK 201
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 219 (82.2 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 54/202 (26%), Positives = 99/202 (49%)
Query: 59 NPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF 117
NP GT + + N G + G+ +GH ++I +SPCG ++ ++S
Sbjct: 48 NPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSA 107
Query: 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177
D T +W+ C TL GH+ V + WS + + + + S DK++ ++E+
Sbjct: 108 DKTVKIWNM--DHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTS---R 162
Query: 178 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS 237
+ H V F+P +++ S S+D++V+++ D I TL +H+ V +
Sbjct: 163 MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW--DVKTGMCIK--TLPAHSDPVSA 218
Query: 238 LAFDRIGSRLATCSDDATVKIW 259
++F+R GS +A+ S D V+IW
Sbjct: 219 VSFNRDGSLIASGSYDGLVRIW 240
Score = 201 (75.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 58/238 (24%), Positives = 109/238 (45%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH + + ++P G + + DK +++W + + L+ GH+ + + A
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHM----ICERTLT-GHKLGVNDIA 136
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WS + SAS D T +++ + + TL+GH N V ++ + + S D+S
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRM--TKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W+V C + AH V V F+ +++AS SYD V+++ D A I
Sbjct: 195 VRIWDVKTG---MCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW--DTANGQCIK 249
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282
+ V + F G + + D+T+K+W ++ G + T +S + C+
Sbjct: 250 -TLVDDENPPVAFVKFSPNGKYILASNLDSTLKLW-DFSKGKTLKQYTGHENSKY-CI 304
Score = 192 (72.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 53/224 (23%), Positives = 109/224 (48%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
MI +TL GH+ V +++W+ + S +DK ++++ E ++ T K + GH
Sbjct: 119 MICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIF--EIVTSRMT-KTL--KGHNNY 173
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
+ ++P + + S SFD + +WD ++G C TL H + V +V+++++G +A+
Sbjct: 174 VFCCNFNPQSSLVVSGSFDESVRIWDVKTGM--CIKTLPAHSDPVSAVSFNRDGSLIASG 231
Query: 160 SRDKSVWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
S D V +W+ +C +++ V V+F P + +++ D T+KL+ K
Sbjct: 232 SYDGLVRIWDTANG---QCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKG 288
Query: 219 EADWINFATLKSHTSTVWSLA--FDRIGSR-LATCSDDATVKIW 259
+ H ++ + + F G + + + S+D + IW
Sbjct: 289 KT----LKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIW 328
Score = 168 (64.2 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 47/178 (26%), Positives = 86/178 (48%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL H V VS+N G++I+S D +R+W N K ++ D + +
Sbjct: 207 KTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDT---ANGQCIKTLVDDENP-PVAFV 262
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWS-KNGQFLATCS 160
+SP G +I +++ D+T +WD G+ T GHEN + +S G+++ + S
Sbjct: 263 KFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT--GHENSKYCIFANFSVTGGKWIISGS 320
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKED 216
D +++W + + +C + H Q V HP NI+AS + D+ + +++ D
Sbjct: 321 EDCKIYIWNLQTREIVQC---LEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWRSD 375
Score = 154 (59.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 41/138 (29%), Positives = 66/138 (47%)
Query: 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 187
S ++ TLEGH + S +S G++L T S DK+V +W + D C + H
Sbjct: 74 SANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM---DHMICERTLTGHKL 130
Query: 188 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247
V + + + SAS D T+K+F+ + TLK H + V+ F+ S +
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMT----KTLKGHNNYVFCCNFNPQSSLV 186
Query: 248 ATCSDDATVKIWKEYKPG 265
+ S D +V+IW + K G
Sbjct: 187 VSGSFDESVRIW-DVKTG 203
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 44/154 (28%), Positives = 68/154 (44%)
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
A++ TL+ HT ++ S F G L T S D TVKIW N
Sbjct: 75 ANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIW---------------NMDHM 119
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
C TL+GH + DI+W + + +A D ++IF ++V+ + T +
Sbjct: 120 ICERTLTGHK-LGVNDIAWSSDSRCVVSASDDKTLKIF---------EIVTSRMTKTL-K 168
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
HN V C +NP ++ S S D V++W +K
Sbjct: 169 GHNNYVFCCNFNPQ-SSLVVSGSFDESVRIWDVK 201
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 222 (83.2 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 64/218 (29%), Positives = 98/218 (44%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S K H V +V ++ G ++ + EDK+I++W F +F H +R
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSM--FRQRFLYSLYR---HTHWVRC 149
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G I S S D T +WD + Q C V ++ NG +A+ D
Sbjct: 150 AKFSPDGRLIVSCSEDKTIKIWDTTNKQ--CVNNFSDSVGFANFVDFNPNGTCIASAGSD 207
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+V +W++ + V H V + FHP N L +AS D TVK+ D E
Sbjct: 208 HAVKIWDIRMNKLLQHYQV---HSCGVNCLSFHPLGNSLVTASSDGTVKML--DLIEGRL 262
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
I TL+ HT V++++F + G L + DA V IW+
Sbjct: 263 IY--TLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWR 298
Score = 213 (80.0 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 62/221 (28%), Positives = 104/221 (47%)
Query: 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
I ++ KGH+ + + ++P I++ D + LW + A+A GH+ +
Sbjct: 9 ILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPH-----ARAYRYVGHKDVV 63
Query: 101 RETAWSPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
+SP GN +ASAS D T +W R G+ ++ + H V+SV +S +GQ L T
Sbjct: 64 TSLQFSPQGNLLASASRDRTVRLWVLDRKGK---SSEFKAHTAPVRSVDFSADGQLLVTA 120
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
S DKS+ VW + + + H V+ +F P ++ S S D T+K++ D
Sbjct: 121 SEDKSIKVWSMFRQ---RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTN 175
Query: 220 ADWIN-FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+N F+ + V F+ G+ +A+ D VKIW
Sbjct: 176 KQCVNNFSDSVGFANFV---DFNPNGTCIASAGSDHAVKIW 213
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 66/254 (25%), Positives = 114/254 (44%)
Query: 136 TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195
+ +GH+ + S +S N + +AT S D + +W + + A H V ++F
Sbjct: 13 SFKGHKAAITSADFSPNCKQIATASWDTFLMLWSL---KPHARAYRYVGHKDVVTSLQFS 69
Query: 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255
P N+LASAS D TV+L+ D+ + K+HT+ V S+ F G L T S+D +
Sbjct: 70 PQGNLLASASRDRTVRLWVLDRKGKS----SEFKAHTAPVRSVDFSADGQLLVTASEDKS 125
Query: 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS---WCHLTDLIATACGD- 311
+K+W ++ + + + W C GR I S + D C +
Sbjct: 126 IKVWSMFR---QRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 312 --DAIRI--FKE-NPE------AGDSDMVS-FDL----VHTEHRAHNQDVNCVAWNPVVP 355
D++ F + NP AG V +D+ + ++ H+ VNC++++P+
Sbjct: 182 FSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPL-G 240
Query: 356 GMLASCSDDGDVKL 369
L + S DG VK+
Sbjct: 241 NSLVTASSDGTVKM 254
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 215 (80.7 bits), Expect = 9.6e-16, P = 9.6e-16
Identities = 68/225 (30%), Positives = 111/225 (49%)
Query: 44 QTLKGHQGRVWNVSWNP-QGTMISSCGE-DKNIRLWGKESFGNKFTAKAILS-DGHQRTI 100
Q K H V++V W+ +G + G D+ ++LW + K++ + GH+ I
Sbjct: 105 QVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLW------DPTVGKSLCTFRGHESII 158
Query: 101 RETAWSPC--GNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSK-NGQFL 156
T WSP G F ASAS D T +WD K +G + H+ E+ S W K N L
Sbjct: 159 YSTIWSPHIPGCF-ASASGDQTLRIWDVKAAG---VRIVIPAHQAEILSCDWCKYNENLL 214
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKE 215
T + D S+ W++ + + + H +++V+F PF ++LAS SYD TV+ +
Sbjct: 215 VTGAVDCSLRGWDL--RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNF 272
Query: 216 DKAEADWINFATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKIW 259
K ++ T++ HT L F + +++A CS D T+KI+
Sbjct: 273 SKPDS---LLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIY 314
Score = 181 (68.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 65/264 (24%), Positives = 116/264 (43%)
Query: 53 VWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GN 110
+++V+W+ ++ +C D +++LW K + H + + WS G
Sbjct: 70 LFDVTWSENNEHVLITCSGDGSLQLWDTA----KAAGPLQVYKEHAQEVYSVDWSQTRGE 125
Query: 111 -FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWV 167
+ S S+D T +WD G+ C T GHE+ + S WS + G F A+ S D+++ +
Sbjct: 126 QLVVSGSWDQTVKLWDPTVGKSLC--TFRGHESIIYSTIWSPHIPGCF-ASASGDQTLRI 182
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFA 226
W+V VI AH ++ + + +N+L + + D +++ + D F
Sbjct: 183 WDVKAAG---VRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGW--DLRNVRQPVFE 237
Query: 227 TLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285
L HT + + F S LA+CS D TV+ W KP + + T ++ + + C
Sbjct: 238 LL-GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDSL--LETVEHHTEFTCGLDF 294
Query: 286 SGHHGRTIYDISWCHLTDLIATAC 309
S + D SW + AC
Sbjct: 295 SLQSPTQVADCSWDETIKIYDPAC 318
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 180 (68.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 53/185 (28%), Positives = 87/185 (47%)
Query: 39 EMINSQTLKG--------HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA 90
E IN +T+K H V++ ++ G I+SCG DK ++++ E+ KA
Sbjct: 596 EWINKKTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA 655
Query: 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--T 148
H+ + A+S ++IA+ S D +WD +G+ T + H +V T
Sbjct: 656 -----HEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLV--HTYDEHSEQVNCCHFT 708
Query: 149 WSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208
N LAT S D + +W++ ++ EC + H V RF P D +LAS S D
Sbjct: 709 NKSNHLLLATGSNDFFLKLWDLNQK---ECRNTMFGHTNSVNHCRFSPDDELLASCSADG 765
Query: 209 TVKLF 213
T++L+
Sbjct: 766 TLRLW 770
Score = 156 (60.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 48/166 (28%), Positives = 77/166 (46%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
H + +S G IAS D T V+ +G E ++ HE+EV +S + +
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETG--EKLLDIKAHEDEVLCCAFSSDDSY 671
Query: 156 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN--ILASASYDDTVKLF 213
+ATCS DK V +W+ + + H + V F N +LA+ S D +KL+
Sbjct: 672 IATCSADKKVKIWDSATG---KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
++ E N T+ HT++V F LA+CS D T+++W
Sbjct: 729 DLNQKECR--N--TMFGHTNSVNHCRFSPDDELLASCSADGTLRLW 770
Score = 148 (57.2 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 50/198 (25%), Positives = 86/198 (43%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL-----------EGHENE 143
GH ++ +SP +AS S D T +WD RS + + E E
Sbjct: 741 GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVI 800
Query: 144 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203
VK +WS +G + +++K V ++++ A + H ++ F P+D++
Sbjct: 801 VKCCSWSADGDKIIVAAKNK-VLLFDIHTSGLL--AEIHTGHHSTIQYCDFSPYDHLAVI 857
Query: 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
A V+L+ D + A + H S V + F GS T SDD T+++W+ K
Sbjct: 858 ALSQYCVELWNIDSR----LKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913
Query: 264 P-GNSAGIPTPDNDSVWK 280
NSA + + D V++
Sbjct: 914 VCKNSAIVLKQEIDVVFQ 931
Score = 140 (54.3 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 35/133 (26%), Positives = 65/133 (48%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRETA 104
+K H+ V +++ + I++C DK +++W + T K + + D H +
Sbjct: 653 IKAHEDEVLCCAFSSDDSYIATCSADKKVKIW------DSATGKLVHTYDEHSEQVNCCH 706
Query: 105 WSPCGN--FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
++ N +A+ S D +WD Q EC T+ GH N V +S + + LA+CS D
Sbjct: 707 FTNKSNHLLLATGSNDFFLKLWDLN--QKECRNTMFGHTNSVNHCRFSPDDELLASCSAD 764
Query: 163 KSVWVWEVGEEDE 175
++ +W+V +E
Sbjct: 765 GTLRLWDVRSANE 777
Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
Identities = 46/170 (27%), Positives = 76/170 (44%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH++ +R ++ G + S+S D+ VW+ ++G + L+ H+ VK ++ +
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDY---VFLQAHQETVKDFRLLQDSR 1057
Query: 155 FLATCSRDKSVWVWEV--GE-EDEYEC--AAVINAHIQDVKKVRFHPFDNILASASYDDT 209
L+ S D +V VW V G E ++ C V++ I +F +S S D T
Sbjct: 1058 LLSW-SFDGTVKVWNVITGRIERDFTCHQGTVLSCAISS-DATKF-------SSTSADKT 1108
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
K++ D LK H V AF G LAT D+ ++IW
Sbjct: 1109 AKIWSFDLLSP----LHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIW 1154
Score = 98 (39.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 39/166 (23%), Positives = 73/166 (43%)
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN--------- 275
F++ H V + F G L + S+D+ +++W ++ G+ +
Sbjct: 996 FSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWN-WQTGDYVFLQAHQETVKDFRLLQ 1054
Query: 276 DS---VWKCVCTLSGHH---GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 329
DS W T+ + GR D + CH +++ A DA + F + +
Sbjct: 1055 DSRLLSWSFDGTVKVWNVITGRIERDFT-CHQGTVLSCAISSDATK-FSSTSADKTAKIW 1112
Query: 330 SFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDD-GDVKLWQI 372
SFDL+ H + HN V C A++ + G+L + DD G++++W +
Sbjct: 1113 SFDLLSPLHELKGHNGCVRCSAFS--LDGILLATGDDNGEIRIWNV 1156
Score = 97 (39.2 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 26/79 (32%), Positives = 35/79 (44%)
Query: 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240
V+ H V F +AS D T+++FK + E +K+H V AF
Sbjct: 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGE----KLLDIKAHEDEVLCCAF 665
Query: 241 DRIGSRLATCSDDATVKIW 259
S +ATCS D VKIW
Sbjct: 666 SSDDSYIATCSADKKVKIW 684
Score = 88 (36.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 39/181 (21%), Positives = 71/181 (39%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA---ILS-----DGH 96
T+ GH V + ++P +++SC D +RLW S + + LS +
Sbjct: 738 TMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDV 797
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ ++ +WS G+ I A+ + SG T GH + ++ +S
Sbjct: 798 EVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHT--GHHSTIQYCDFSPYDHLA 855
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
V +W + D A H+ V V F P + +AS D T+++++
Sbjct: 856 VIALSQYCVELWNI---DSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETK 912
Query: 217 K 217
K
Sbjct: 913 K 913
Score = 72 (30.4 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 296 ISWCHLTD-----LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350
++ CH T+ L+AT D ++++ N + + M H VN +
Sbjct: 702 VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG----------HTNSVNHCRF 751
Query: 351 NPVVPGMLASCSDDGDVKLWQIKLEN 376
+P +LASCS DG ++LW ++ N
Sbjct: 752 SPD-DELLASCSADGTLRLWDVRSAN 776
Score = 45 (20.9 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
R H V+ V ++P L + SDD +++W+ K
Sbjct: 879 RGHLSWVHGVMFSPDGSSFLTA-SDDQTIRVWETK 912
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 225 (84.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 75/298 (25%), Positives = 131/298 (43%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q L GH V + +G + +SC +D++IR+W G A GH ++
Sbjct: 370 QILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGE--VACVAQGSGHTHSVGTI 427
Query: 104 AWSPCGN-FIASASFDATTAVW-------DKRSGQ------FECNATLEGHENEVKSVTW 149
S F+ + S D T +W K +G + AT H+ ++ SV
Sbjct: 428 CCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRCHDKDINSVAV 487
Query: 150 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209
+ N + LAT S+D++ +W + + + H + + V+F P D +LA+AS D T
Sbjct: 488 APNDKLLATGSQDRTAKLWAL---PRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGT 544
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 269
+KL+ A D+ T + H ++V +AF G++L + D +K+W
Sbjct: 545 IKLW----ALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLW---------- 590
Query: 270 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 327
T N+ +CV TL H + ++ + L D T D + ++K+ EA ++
Sbjct: 591 --TIKNN---ECVRTLDAHEDK-VWGLHCSRLDDRALTGASDSRVVLWKDVTEAEQAE 642
Score = 150 (57.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 73/293 (24%), Positives = 123/293 (41%)
Query: 95 GHQRTIRETAW-SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 153
G+ + + + P + + AS V+D ++ C L GH + V ++ + G
Sbjct: 332 GYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSA--CQI-LHGHTDIVLALDVFRKG 388
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKL 212
+ A+C++D+S+ VW + + E C A + H V + + L + S D TVKL
Sbjct: 389 RLFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKL 448
Query: 213 FKEDKA--------EADWINF---ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261
+ +A E + AT + H + S+A LAT S D T K+W
Sbjct: 449 WPLPEALLSKGTGHEGGPVFLQAQATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLW-- 506
Query: 262 YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321
+P + + T SGH R ++ + + + ++ATA D I+++
Sbjct: 507 -------ALPR------CQLLGTFSGHR-RGLWCVQFSPMDQVLATASADGTIKLWA--- 549
Query: 322 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIK 373
+ F + T H+ V VA+ V G L S DG +KLW IK
Sbjct: 550 ------LQDFSCLKT-FEGHDASVLKVAF--VSRGTQLLSSGSDGLLKLWTIK 593
Score = 146 (56.5 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 42/171 (24%), Positives = 80/171 (46%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
RC+++ T GH+ +W V ++P ++++ D I+LW + F K +GH
Sbjct: 510 RCQLLG--TFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFS---CLKTF--EGH 562
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
++ + A+ G + S+ D +W ++ EC TL+ HE++V + S+
Sbjct: 563 DASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNN--ECVRTLDAHEDKVWGLHCSRLDDRA 620
Query: 157 ATCSRDKSVWVW-EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 206
T + D V +W +V E ++ E A ++ + V+ DN+L Y
Sbjct: 621 LTGASDSRVVLWKDVTEAEQAEEQAK-----REEQVVKQQELDNLLHEKRY 666
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 225 (84.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 75/298 (25%), Positives = 131/298 (43%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q L GH V + +G + +SC +D++IR+W G A GH ++
Sbjct: 370 QILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGE--VACVAQGSGHTHSVGTI 427
Query: 104 AWSPCGN-FIASASFDATTAVW-------DKRSGQ------FECNATLEGHENEVKSVTW 149
S F+ + S D T +W K +G + AT H+ ++ SV
Sbjct: 428 CCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQHCHDKDINSVAV 487
Query: 150 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209
+ N + LAT S+D++ +W + + + H + + V+F P D +LA+AS D T
Sbjct: 488 APNDKLLATGSQDRTAKLWAL---PRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGT 544
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 269
+KL+ A D+ T + H ++V +AF G++L + D +K+W
Sbjct: 545 IKLW----ALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLW---------- 590
Query: 270 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 327
T N+ +CV TL H + ++ + L D T D + ++K+ EA ++
Sbjct: 591 --TIKNN---ECVRTLDAHEDK-VWGLHCSRLDDRALTGASDSRVVLWKDVTEAEQAE 642
Score = 147 (56.8 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 73/293 (24%), Positives = 122/293 (41%)
Query: 95 GHQRTIRETAW-SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 153
G+ + + + P + + AS V+D ++ C L GH + V ++ + G
Sbjct: 332 GYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSA--CQI-LHGHTDIVLALDVFRKG 388
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKL 212
+ A+C++D+S+ VW + + E C A + H V + + L + S D TVKL
Sbjct: 389 RLFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKL 448
Query: 213 FKEDKA--------EADWINF---ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261
+ +A E + AT H + S+A LAT S D T K+W
Sbjct: 449 WPLPEALLSKGTGHEGGPVFLQAQATQHCHDKDINSVAVAPNDKLLATGSQDRTAKLW-- 506
Query: 262 YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321
+P + + T SGH R ++ + + + ++ATA D I+++
Sbjct: 507 -------ALPR------CQLLGTFSGHR-RGLWCVQFSPMDQVLATASADGTIKLWA--- 549
Query: 322 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIK 373
+ F + T H+ V VA+ V G L S DG +KLW IK
Sbjct: 550 ------LQDFSCLKT-FEGHDASVLKVAF--VSRGTQLLSSGSDGLLKLWTIK 593
Score = 146 (56.5 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 42/171 (24%), Positives = 80/171 (46%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
RC+++ T GH+ +W V ++P ++++ D I+LW + F K +GH
Sbjct: 510 RCQLLG--TFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFS---CLKTF--EGH 562
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
++ + A+ G + S+ D +W ++ EC TL+ HE++V + S+
Sbjct: 563 DASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNN--ECVRTLDAHEDKVWGLHCSRLDDRA 620
Query: 157 ATCSRDKSVWVW-EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 206
T + D V +W +V E ++ E A ++ + V+ DN+L Y
Sbjct: 621 LTGASDSRVVLWKDVTEAEQAEEQAK-----REEQVVKQQELDNLLHEKRY 666
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 197 (74.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 62/224 (27%), Positives = 103/224 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L GH+G +++ +N GT ++S G DK I LW +G + GH+ TI E W
Sbjct: 58 LIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNV--YGECINYSVL--KGHKGTILELHW 113
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKS 164
S N I +A D + VWD G E + H V S ++ G +A+ S D+S
Sbjct: 114 STDSNEIYTACTDKSIGVWDSNKG--ELIKRIREHSGVVNSCCPARRGPPLVASGSDDRS 171
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+++ + + H V V F + L + D+ ++++ + + + D +
Sbjct: 172 ARIFDTRSKGSTH----LFQHKYPVTSVCFSDASDQLITGGIDNVIRVW-DIRNQEDPLY 226
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW--KEYKPGN 266
TL SH T+ S + + G+ L + S D + KIW + Y P N
Sbjct: 227 --TLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPN 268
Score = 153 (58.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 50/171 (29%), Positives = 80/171 (46%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC 108
H+ V +V ++ + + G D IR+W N+ L+ HQ TI T+ S
Sbjct: 188 HKYPVTSVCFSDASDQLITGGIDNVIRVW---DIRNQEDPLYTLAS-HQDTITSTSVSKD 243
Query: 109 GNFIASASFDATTAVWDKRS-GQFECNA-TLEGHENE-----VKSVTWSKNGQFLATCSR 161
G ++ S S D + +WD R N T G +N +KS +WS +G+ + S
Sbjct: 244 GAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKS-SWSIDGRRIGCGSS 302
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 212
D+ V++W+ + C + H V +V FHP + I+AS S D T+ L
Sbjct: 303 DRQVYIWDTNTKQLQYC---LPGHSGTVNEVTFHPNEPIIASCSSDKTIYL 350
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG--NKFTAKAI--LSDGHQRTI 100
TL HQ + + S + G + S D + ++W + N+ K + ++ +
Sbjct: 227 TLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNR-NIKTFNGAQNNFEKNL 285
Query: 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFE-CNATLEGHENEVKSVTWSKNGQFLATC 159
+++WS G I S D +WD + Q + C L GH V VT+ N +A+C
Sbjct: 286 IKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYC---LPGHSGTVNEVTFHPNEPIIASC 342
Query: 160 SRDKSVWVWEV 170
S DK++++ E+
Sbjct: 343 SSDKTIYLGEI 353
Score = 119 (46.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 59/231 (25%), Positives = 90/231 (38%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
E IN LKGH+G + + W+ I + DK+I +W G K I H
Sbjct: 94 ECINYSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWDSNK-GELI--KRIRE--HSG 148
Query: 99 TIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 157
+ + G +AS S D + ++D RS + + L H+ V SV +S L
Sbjct: 149 VVNSCCPARRGPPLVASGSDDRSARIFDTRS---KGSTHLFQHKYPVTSVCFSDASDQLI 205
Query: 158 TCSRDKSVWVWEV-GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
T D + VW++ +ED A +H + L S S D++ K++
Sbjct: 206 TGGIDNVIRVWDIRNQEDPLYTLA---SHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIR 262
Query: 217 KAEADWINFATL--------KSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
N T K+ + WS+ D G R+ S D V IW
Sbjct: 263 PYAPPNRNIKTFNGAQNNFEKNLIKSSWSI--D--GRRIGCGSSDRQVYIW 309
Score = 59 (25.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
H+ VN V ++P P ++ASCS D + L +IK
Sbjct: 323 HSGTVNEVTFHPNEP-IIASCSSDKTIYLGEIK 354
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 208 (78.3 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 66/221 (29%), Positives = 103/221 (46%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TLKGH V VS++P G MI++ D +R+W + G A GH + I A
Sbjct: 186 TLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKK-GQALGAPL---KGHVKWITSLA 241
Query: 105 WSP-----CGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
W P G+ +ASAS D+T +WD S + + L GH+ V V W G+ + T
Sbjct: 242 WEPYHLQQSGHPRLASASKDSTVRIWDVISKR--ADIVLSGHKGSVTCVRWGGTGK-IYT 298
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
S D+++ VW ++AH V + D IL +A +D T K+ + D
Sbjct: 299 SSHDRTIKVWN---SQTGTLIQTLSAHAHRVNHLALST-DFILRTAYHDHTGKVPESD-- 352
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
AD + A + + + ++I +L + SDD T+ +W
Sbjct: 353 -ADKVAMAKKRFEKAATIN---NKIVEKLVSASDDFTMYLW 389
Score = 177 (67.4 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 51/172 (29%), Positives = 87/172 (50%)
Query: 95 GHQRTIRETAWSPCGNF-IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 153
GH I T++SP + + S S D+T +WD +G + TL+GH + V +V++S NG
Sbjct: 146 GHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGT-PLH-TLKGHTSWVLAVSYSPNG 203
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD------NILASASYD 207
+AT S D +V +W+ + A + H++ + + + P+ LASAS D
Sbjct: 204 AMIATGSMDNTVRIWDAKKGQAL--GAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKD 261
Query: 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
TV+++ AD + L H +V + + G ++ T S D T+K+W
Sbjct: 262 STVRIWDVISKRADIV----LSGHKGSVTCVRWGGTG-KIYTSSHDRTIKVW 308
Score = 174 (66.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 40/124 (32%), Positives = 69/124 (55%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW-GKESFGNKFTAKAILSDGHQRTIRETA 104
L GHQ V +V+++P I+S G D +++LW G++ KF GH + +
Sbjct: 401 LLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDG---KFITTL---RGHVGAVYQCC 454
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+S + S+S D T VW+ R+G+ + L GH++EV +V WS +GQ + + +DK+
Sbjct: 455 FSADSRLLVSSSKDTTLKVWNVRTGKL--SEDLPGHKDEVFAVDWSPDGQKVGSGGKDKA 512
Query: 165 VWVW 168
+ +W
Sbjct: 513 IRIW 516
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 41/148 (27%), Positives = 71/148 (47%)
Query: 67 SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK 126
S +D + LW ES +K A+ + GHQ+ + +SP +IASA FD +W+
Sbjct: 379 SASDDFTMYLWDPES-SSKPVARLL---GHQKEVNHVTFSPDMAYIASAGFDNHVKLWNG 434
Query: 127 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 186
R G+F TL GH V +S + + L + S+D ++ VW V + + + H
Sbjct: 435 RDGKFI--TTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTG---KLSEDLPGHK 489
Query: 187 QDVKKVRFHPFDNILASASYDDTVKLFK 214
+V V + P + S D +++++
Sbjct: 490 DEVFAVDWSPDGQKVGSGGKDKAIRIWR 517
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 40/151 (26%), Positives = 71/151 (47%)
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
+ SAS D T +WD S A L GH+ EV VT+S + ++A+ D V +W G
Sbjct: 377 LVSASDDFTMYLWDPESSSKPV-ARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWN-G 434
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF--KEDKAEADWINFATLK 229
+ ++ + H+ V + F +L S+S D T+K++ + K D L
Sbjct: 435 RDGKF--ITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSED------LP 486
Query: 230 SHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
H V+++ + G ++ + D ++IW+
Sbjct: 487 GHKDEVFAVDWSPDGQKVGSGGKDKAIRIWR 517
Score = 123 (48.4 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 37/134 (27%), Positives = 68/134 (50%)
Query: 133 CNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191
C+A++ GH + + ++S + + + S D + +W+ D + H V
Sbjct: 140 CSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDC---DTGTPLHTLKGHTSWVLA 196
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD-----RIGS- 245
V + P ++A+ S D+TV+++ K +A + A LK H + SLA++ + G
Sbjct: 197 VSYSPNGAMIATGSMDNTVRIWDAKKGQA--LG-APLKGHVKWITSLAWEPYHLQQSGHP 253
Query: 246 RLATCSDDATVKIW 259
RLA+ S D+TV+IW
Sbjct: 254 RLASASKDSTVRIW 267
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 50/200 (25%), Positives = 91/200 (45%)
Query: 62 GT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DA 119
GT I + D+ I++W ++ G T LS H + A S +FI ++ D
Sbjct: 292 GTGKIYTSSHDRTIKVWNSQT-G---TLIQTLS-AHAHRVNHLALST--DFILRTAYHDH 344
Query: 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179
T V + + + A + + ++ +K + L + S D ++++W+ E +
Sbjct: 345 TGKVPESDADKV---AMAKKRFEKAATIN-NKIVEKLVSASDDFTMYLWD--PESSSKPV 398
Query: 180 AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 239
A + H ++V V F P +ASA +D+ VKL+ + + +I TL+ H V+
Sbjct: 399 ARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLW--NGRDGKFIT--TLRGHVGAVYQCC 454
Query: 240 FDRIGSRLATCSDDATVKIW 259
F L + S D T+K+W
Sbjct: 455 FSADSRLLVSSSKDTTLKVW 474
Score = 113 (44.8 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 31/95 (32%), Positives = 48/95 (50%)
Query: 178 CAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 236
C+A I H + + F P + + S S D T +++ D TLK HTS V
Sbjct: 140 CSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTP----LHTLKGHTSWVL 195
Query: 237 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIP 271
++++ G+ +AT S D TV+IW + K G + G P
Sbjct: 196 AVSYSPNGAMIATGSMDNTVRIW-DAKKGQALGAP 229
Score = 55 (24.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
H ++VN V ++P + +AS D VKLW
Sbjct: 404 HQKEVNHVTFSPDM-AYIASAGFDNHVKLW 432
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 219 (82.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 63/211 (29%), Positives = 102/211 (48%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH+ V V+++P G +++S DK +R+W G +A H T+R +
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRA-----HTATVRSVHFCS 113
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G + +AS D T VW +F + T H N V+ +S +G+ + + S DK+V +
Sbjct: 114 DGQSLVTASDDKTVKVWSTHRQRFLFSLTQ--HINWVRCAKFSPDGRLIVSASDDKTVKL 171
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 227
W+ + EC H V V FHP +A+A D+TVK++ D +
Sbjct: 172 WD---KTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW--DARTHRLLQHYQ 226
Query: 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
L H++ V +L+F G+ L T S D+T+KI
Sbjct: 227 L--HSAAVNALSFHPSGNYLITASSDSTLKI 255
Score = 202 (76.2 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 62/218 (28%), Positives = 92/218 (42%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S + H V +V + G + + +DK +++W +F L+ H +R
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR--QRFLFS--LTQ-HINWVRC 150
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G I SAS D T +WDK S EC + H V V + +G +A D
Sbjct: 151 AKFSPDGRLIVSASDDKTVKLWDKTSR--ECIHSYCEHGGFVTYVDFHPSGTCIAAAGMD 208
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+V VW+ + H V + FHP N L +AS D T+K+ D E
Sbjct: 209 NTVKVWDART---HRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKIL--DLMEGRL 263
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
+ TL H ++AF R G A+ D V +WK
Sbjct: 264 LY--TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 199 (75.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 62/214 (28%), Positives = 97/214 (45%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH+ V V ++ ++S D + +W K ++A GH+ + +S
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHM-----KPQSRAYRFTGHKDAVTCVNFS 70
Query: 107 PCGNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
P G+ +AS S D T +W G+ + H V+SV + +GQ L T S DK+V
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGE---STVFRAHTATVRSVHFCSDGQSLVTASDDKTV 127
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
VW + + HI V+ +F P ++ SAS D TVKL+ DK + I+
Sbjct: 128 KVWSTHRQ---RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRECIH- 181
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ H V + F G+ +A D TVK+W
Sbjct: 182 -SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 163 (62.4 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 42/127 (33%), Positives = 66/127 (51%)
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
+GH + V V +S N + LA+ S D ++ +W + + A H V V F P
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSR---AYRFTGHKDAVTCVNFSPS 72
Query: 198 DNILASASYDDTVKLFKED-KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
++LAS S D TV+++ + K E+ ++HT+TV S+ F G L T SDD TV
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGES-----TVFRAHTATVRSVHFCSDGQSLVTASDDKTV 127
Query: 257 KIWKEYK 263
K+W ++
Sbjct: 128 KVWSTHR 134
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 219 (82.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 68/240 (28%), Positives = 111/240 (46%)
Query: 23 STENLTGTNLILCSRCEMINSQT----LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG 78
+T+ L ++ C + QT GH+ V V+++P G +++S DK +R+W
Sbjct: 30 NTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV 89
Query: 79 KESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE 138
G +A H T+R + G +AS D T VW +F + L
Sbjct: 90 PNVKGESTVFRA-----HTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFS--LS 142
Query: 139 GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198
H N V+ +S +G+ + + S DK+V +W+ + EC H V V FHP
Sbjct: 143 QHINWVRCAKFSPDGRLIVSASDDKTVKLWD---KTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 199 NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
+A+A D+TVK++ D + L H++ V +L+F G+ L T S D+T+KI
Sbjct: 200 TCIAAAGMDNTVKVW--DVRTHRLLQHYQL--HSAAVNALSFHPSGNYLVTASSDSTLKI 255
Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 65/218 (29%), Positives = 92/218 (42%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S + H V +V + G + +DK +++W KF LS H +R
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHR--QKFLFS--LSQ-HINWVRC 150
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G I SAS D T +WDK S EC + H V V + +G +A D
Sbjct: 151 AKFSPDGRLIVSASDDKTVKLWDKTSR--ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMD 208
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+V VW+V + H V + FHP N L +AS D T+K+ D E
Sbjct: 209 NTVKVWDVRT---HRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKIL--DLMEGRL 263
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
+ TL H ++AF R G A+ D V +WK
Sbjct: 264 LY--TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 196 (74.1 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 60/214 (28%), Positives = 98/214 (45%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH+ V +V ++ ++S D + +W K +A GH+ + +S
Sbjct: 16 KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHM-----KPQTRAYRFAGHKDAVTCVNFS 70
Query: 107 PCGNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
P G+ +AS S D T +W G+ + H V+SV + +GQ T S DK+V
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGE---STVFRAHTATVRSVHFCSDGQSFVTASDDKTV 127
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
VW + + ++ HI V+ +F P ++ SAS D TVKL+ DK + ++
Sbjct: 128 KVWSTHRQ---KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRECVH- 181
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ H V + F G+ +A D TVK+W
Sbjct: 182 -SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 159 (61.0 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 44/128 (34%), Positives = 66/128 (51%)
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE-YECAAVINAHIQDVKKVRFHP 196
+GH + V SV +S N + LA+ S D + VW + + Y A H V V F P
Sbjct: 16 KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAG----HKDAVTCVNFSP 71
Query: 197 FDNILASASYDDTVKLFKED-KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255
++LAS S D TV+++ + K E+ ++HT+TV S+ F G T SDD T
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGES-----TVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 256 VKIWKEYK 263
VK+W ++
Sbjct: 127 VKVWSTHR 134
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 221 (82.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 60/218 (27%), Positives = 104/218 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL-SDGHQRTIRETA 104
L+ H RV V+++P G +++ D R++ + T K +L +GH +++ + A
Sbjct: 292 LEQHPQRVSKVAFHPNGHHLATACFDSTWRMY------DLTTKKELLYQEGHSKSVADVA 345
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+ P G+ + D VWD R+G+ C L+GH E+ SV W NG + T S D S
Sbjct: 346 FHPDGSVALTGGHDCYGRVWDMRTGR--CIMFLDGHTKEIHSVEWMPNGYEMITGSSDNS 403
Query: 165 VWVWEVG-EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
+ VW++ + Y + AH V +VR L SAS+D T+K++ + W
Sbjct: 404 MKVWDLRMRRNTY----TMPAHTSVVTRVRADAAGQYLVSASFDCTLKMW----STTGWQ 455
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261
L+ H + + + G + + + D T K+W +
Sbjct: 456 PLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLWAQ 493
Score = 113 (44.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/173 (24%), Positives = 75/173 (43%)
Query: 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE--GHENEVKSVTWSKNGQF 155
R + +S I +A + + AVW KR +C ++ GH ++ + G F
Sbjct: 205 RPVAFCEFSADSEHIVTAGWSGSVAVW-KRE---QCAQEIKFIGHSSQAGCARFHP-GAF 259
Query: 156 ---------LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 206
+ +CS D +V +W + +E + H Q V KV FHP + LA+A +
Sbjct: 260 TQNDYSSLNVVSCSYDGTVLLWSLSQESPI---GELEQHPQRVSKVAFHPNGHHLATACF 316
Query: 207 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D T +++ D + + + H+ +V +AF GS T D ++W
Sbjct: 317 DSTWRMY--DLTTKKELLYQ--EGHSKSVADVAFHPDGSVALTGGHDCYGRVW 365
Score = 54 (24.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374
H ++++ V W P M+ SD+ +K+W +++
Sbjct: 379 HTKEIHSVEWMPNGYEMITGSSDNS-MKVWDLRM 411
>ASPGD|ASPL0000060163 [details] [associations]
symbol:AN1385 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000208901 EMBL:AACD01000019 RefSeq:XP_658989.1
ProteinModelPortal:Q5BDJ5 STRING:Q5BDJ5 GeneID:2877158
KEGG:ani:AN1385.2 OMA:TAIWENI OrthoDB:EOG4CVKH5 Uniprot:Q5BDJ5
Length = 446
Score = 214 (80.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 76/304 (25%), Positives = 131/304 (43%)
Query: 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAK----AILSDGHQRTIRETAWSPC 108
+W W+ G + +KN + +G E + A+L DGH ++ +WS
Sbjct: 99 IWR-RWDDYGEEETLAQGNKNTKNFGAEEDREEDEDDEWRFAVLLDGHDSEVKSVSWSAS 157
Query: 109 GNFIASASFDATTAVW-DKRSGQ--FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G +A+ S D + +W D G FE A ++ HE +VK V W + LA+ S D ++
Sbjct: 158 GMLLATCSRDKSIWIWEDLEDGDNNFETVAVMQEHEGDVKCVAWHPAEECLASGSYDDTI 217
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
+W + D++ A I H V + + +N+ ++ + E +W +
Sbjct: 218 RIWRE-DIDDWGQVACIKGHTGTVWGIDWEDAENVPFPSTSNGV------SGQEEEWKTW 270
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG--NSAG---IPT---PDN-D 276
L G RL +CS D +V++W+ N+AG IP+ P D
Sbjct: 271 HALS--------------GPRLVSCSHDQSVRVWRRQPKAQLNTAGASSIPSIIRPSGTD 316
Query: 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN-------PEAGDSDMV 329
W+ L H IY ++W T L+A+ D + +++E P+A ++D V
Sbjct: 317 ETWEEDVVLPHAHELPIYAVAWSRRTGLLASVGADGRLVVYEERFVSSHTKPQAMNTDEV 376
Query: 330 SFDL 333
S +L
Sbjct: 377 SPNL 380
Score = 189 (71.6 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 55/224 (24%), Positives = 98/224 (43%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGK-ESFGNKFTAKAILSDGHQRTIRETA 104
L GH V +VSW+ G ++++C DK+I +W E N F A++ + H+ ++ A
Sbjct: 142 LDGHDSEVKSVSWSASGMLLATCSRDKSIWIWEDLEDGDNNFETVAVMQE-HEGDVKCVA 200
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW--SKNGQFLATC--- 159
W P +AS S+D T +W + + A ++GH V + W ++N F +T
Sbjct: 201 WHPAEECLASGSYDDTIRIWREDIDDWGQVACIKGHTGTVWGIDWEDAENVPFPSTSNGV 260
Query: 160 SRDKSVW-VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
S + W W V +H Q V+ R P L +A + +
Sbjct: 261 SGQEEEWKTWHALSGPRL----VSCSHDQSVRVWRRQPKAQ-LNTAGASSIPSIIRPSGT 315
Query: 219 EADWINFATLK-SHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261
+ W L +H ++++A+ R LA+ D + +++E
Sbjct: 316 DETWEEDVVLPHAHELPIYAVAWSRRTGLLASVGADGRLVVYEE 359
Score = 184 (69.8 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 65/219 (29%), Positives = 105/219 (47%)
Query: 86 FTAKAILSDGHQRTIRETAWSP--CG-NFIASASFDATTAVWDKRSGQFECNATLEGHEN 142
F + +S GH+R+IR AW P G + +A+ SFDAT +W + E +G++N
Sbjct: 59 FRLLSTISGGHKRSIRTCAWKPNVSGESVLATGSFDATVGIWRRWDDYGEEETLAQGNKN 118
Query: 143 EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202
+KN F A R++ E+DE+ A +++ H +VK V + +LA
Sbjct: 119 -------TKN--FGAEEDREED-------EDDEWRFAVLLDGHDSEVKSVSWSASGMLLA 162
Query: 203 SASYDDTVKLFKEDKAEADWINFAT---LKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ S D ++ ++ ED + D NF T ++ H V +A+ LA+ S D T++IW
Sbjct: 163 TCSRDKSIWIW-EDLEDGD-NNFETVAVMQEHEGDVKCVAWHPAEECLASGSYDDTIRIW 220
Query: 260 KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 298
+E D D W V + GH G T++ I W
Sbjct: 221 RE------------DIDD-WGQVACIKGHTG-TVWGIDW 245
Score = 146 (56.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 60/205 (29%), Positives = 94/205 (45%)
Query: 195 HPFDNILASASYDDTVKLFKEDKAEADWINFATLKS----HTSTVWSLAFD-RIG--SRL 247
HP ++A+ S D TV+++ +NF L + H ++ + A+ + S L
Sbjct: 36 HPTLPLVATCSSDKTVRVYS-------LVNFRLLSTISGGHKRSIRTCAWKPNVSGESVL 88
Query: 248 ATCSDDATVKIWKEYKP---------GN----SAGIPTP---DNDSVWKCVCTLSGHHGR 291
AT S DATV IW+ + GN + G D D W+ L GH
Sbjct: 89 ATGSFDATVGIWRRWDDYGEEETLAQGNKNTKNFGAEEDREEDEDDEWRFAVLLDGHDSE 148
Query: 292 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 351
+ +SW L+AT D +I I+ E+ E GD++ F+ V H DV CVAW+
Sbjct: 149 -VKSVSWSASGMLLATCSRDKSIWIW-EDLEDGDNN---FETVAVMQE-HEGDVKCVAWH 202
Query: 352 PVVPGMLASCSDDGDVKLWQIKLEN 376
P LAS S D +++W+ +++
Sbjct: 203 PAEE-CLASGSYDDTIRIWREDIDD 226
Score = 130 (50.8 bits), Expect = 7.8e-15, Sum P(3) = 7.8e-15
Identities = 30/94 (31%), Positives = 51/94 (54%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CG 109
R W + +P ++++C DK +R++ S N F + +S GH+R+IR AW P G
Sbjct: 29 RTWLTAPHPTLPLVATCSSDKTVRVY---SLVN-FRLLSTISGGHKRSIRTCAWKPNVSG 84
Query: 110 -NFIASASFDATTAVWDKRSGQFECNATLEGHEN 142
+ +A+ SFDAT +W + E +G++N
Sbjct: 85 ESVLATGSFDATVGIWRRWDDYGEEETLAQGNKN 118
Score = 126 (49.4 bits), Expect = 7.8e-15, Sum P(3) = 7.8e-15
Identities = 46/178 (25%), Positives = 81/178 (45%)
Query: 214 KEDKAEADWINFATL-KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPT 272
+E+ + +W FA L H S V S+++ G LATCS D ++ IW++ + G
Sbjct: 128 REEDEDDEW-RFAVLLDGHDSEVKSVSWSASGMLLATCSRDKSIWIWEDLEDG------- 179
Query: 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE---------- 322
DN+ ++ V + H G + ++W + +A+ DD IRI++E+ +
Sbjct: 180 -DNN--FETVAVMQEHEG-DVKCVAWHPAEECLASGSYDDTIRIWREDIDDWGQVACIKG 235
Query: 323 -AG--------DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371
G D++ V F T + Q+ W+ + L SCS D V++W+
Sbjct: 236 HTGTVWGIDWEDAENVPFP--STSNGVSGQEEEWKTWHALSGPRLVSCSHDQSVRVWR 291
Score = 65 (27.9 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 42/175 (24%), Positives = 66/175 (37%)
Query: 137 LEGHENEVKSVTW-SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195
+ G E E K TW + +G L +CS D+SV VW + + A + I + +R
Sbjct: 260 VSGQEEEWK--TWHALSGPRLVSCSHDQSVRVWRRQPKAQLNTAGA--SSIPSI--IRPS 313
Query: 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD-RI---GSRLATCS 251
D ++++ V L A I T + S+ D R+ R +
Sbjct: 314 GTDE-----TWEEDVVL---PHAHELPIYAVAWSRRTGLLASVGADGRLVVYEERFVSSH 365
Query: 252 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS---WCHLTD 303
E P G+ P + W V ++G HG IY+I+ W D
Sbjct: 366 TKPQAMNTDEVSPNLGEGVCAPHPSTEWSIVAVVNGAHG--IYEINHVAWAKRAD 418
Score = 62 (26.9 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 19/72 (26%), Positives = 40/72 (55%)
Query: 156 LATCSRDKSVWVWEVGEEDEYECAAVINA-HIQDVKKVRFHPF---DNILASASYDDTVK 211
+ATCS DK+V V+ + + + I+ H + ++ + P +++LA+ S+D TV
Sbjct: 42 VATCSSDKTVRVYSLVN---FRLLSTISGGHKRSIRTCAWKPNVSGESVLATGSFDATVG 98
Query: 212 LFK--EDKAEAD 221
+++ +D E +
Sbjct: 99 IWRRWDDYGEEE 110
Score = 44 (20.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 357 MLASCSDDGDVKLWQI 372
+L + +DDG +K+W +
Sbjct: 429 VLITTADDGSIKVWTL 444
Score = 43 (20.2 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 247 LATCSDDATVKIW 259
L T +DD ++K+W
Sbjct: 430 LITTADDGSIKVW 442
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 222 (83.2 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 65/215 (30%), Positives = 97/215 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L+GH G V++ + + + SC ED +IR W SF N +L GH + +
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTN-----TVLYQGHAYPVWDLDI 392
Query: 106 SPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
SP + AS S D T +W R+ A GH +V V + N +LAT S DK+
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYA---GHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V +W + + + H V + F P LASA D +KL+ D A
Sbjct: 450 VRLWSAQQGNSVR---LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW--DLASGTL-- 502
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ L+ HT + SL F +A+ S D +V++W
Sbjct: 503 YKELRGHTDNITSLTFSPDSGLIASASMDNSVRVW 537
Score = 193 (73.0 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 45/172 (26%), Positives = 84/172 (48%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N+ +GH VW++ +P +S D+ RLW SF + + + GH +
Sbjct: 376 NTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLW---SFDRTYPLR--IYAGHLADVD 430
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ P N++A+ S D T +W + G T GH V S+ +S NG++LA+
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT--GHRGPVLSLAFSPNGKYLASAGE 488
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
D+ + +W++ Y+ + H ++ + F P ++ASAS D++V+++
Sbjct: 489 DQRLKLWDLASGTLYK---ELRGHTDNITSLTFSPDSGLIASASMDNSVRVW 537
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 46/155 (29%), Positives = 75/155 (48%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH V V ++P +++ DK +RLW + GN L GH+ + A+SP
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GNSVR----LFTGHRGPVLSLAFSP 478
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G ++ASA D +WD SG L GH + + S+T+S + +A+ S D SV V
Sbjct: 479 NGKYLASAGEDQRLKLWDLASGTLY--KELRGHTDNITSLTFSPDSGLIASASMDNSVRV 536
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202
W++ + Y C+A + ++ V N+L+
Sbjct: 537 WDI--RNTY-CSAPADGSSSELVGVYTGQMSNVLS 568
Score = 166 (63.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 51/176 (28%), Positives = 76/176 (43%)
Query: 84 NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE 143
N T IL GH + T + + + S S D + WD G F +GH
Sbjct: 330 NAGTEMKILR-GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYP 386
Query: 144 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203
V + S + A+ S D++ +W D + H+ DV V+FHP N LA+
Sbjct: 387 VWDLDISPYSLYFASGSHDRTARLWSF---DRTYPLRIYAGHLADVDCVKFHPNSNYLAT 443
Query: 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
S D TV+L+ + + + T H V SLAF G LA+ +D +K+W
Sbjct: 444 GSTDKTVRLWSAQQGNS--VRLFT--GHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
Score = 146 (56.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 38/107 (35%), Positives = 58/107 (54%)
Query: 42 NSQTL-KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
NS L GH+G V +++++P G ++S GED+ ++LW S G + K + GH I
Sbjct: 459 NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS-GTLY--KELR--GHTDNI 513
Query: 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV 147
+SP IASAS D + VWD R+ C+A +G +E+ V
Sbjct: 514 TSLTFSPDSGLIASASMDNSVRVWDIRNTY--CSAPADGSSSELVGV 558
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 223 (83.6 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 75/288 (26%), Positives = 128/288 (44%)
Query: 8 ETLLDNQYLLPKTIPSTENLTGTNLILCSRCEMINS--QTLKGHQGRVWNVSWNPQGTMI 65
E +LD ++L P+ + + +N E+ S Q L GH V + +G +
Sbjct: 243 EEVLDVRFLGPE---DSHVVVASNSPCLKVFELQTSACQILHGHTDIVLALDVFRKGWLF 299
Query: 66 SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR-TIRETAWSPCGNFIASASFDATTAVW 124
+SC +D+++R+W G ++ L G Q T++ W P + A TA
Sbjct: 300 ASCAKDQSVRIWRMNKAGQVMLKESFLVTGSQDCTVK--LW-P----LPKALLSKNTAP- 351
Query: 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA 184
D + T H+ ++ SV + N + LAT S+D++ +W + + + V +
Sbjct: 352 DNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWAL---PQCQLLGVFSG 408
Query: 185 HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 244
H + + V+F P D +LA+AS D T+KL+ A D+ T + H ++V +AF G
Sbjct: 409 HRRGLWCVQFSPMDQVLATASADGTIKLW----ALQDFSCLKTFEGHDASVLKVAFVSRG 464
Query: 245 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 292
++L + D VK+W K D VW C+ H T
Sbjct: 465 TQLLSSGSDGLVKLWT-IKNNECVRTLDAHEDKVWGLHCSRLDDHALT 511
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 47/173 (27%), Positives = 69/173 (39%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
H + I A +P +A+ S D T +W Q + GH + V +S Q
Sbjct: 367 HDKDINSVAIAPNDKLLATGSQDRTAKLW--ALPQCQLLGVFSGHRRGLWCVQFSPMDQV 424
Query: 156 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 215
LAT S D ++ +W + ++ C H V KV F L S+ D VKL+
Sbjct: 425 LATASADGTIKLWAL---QDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTI 481
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268
E TL +H VW L R+ T + D+ V +WK+ A
Sbjct: 482 KNNEC----VRTLDAHEDKVWGLHCSRLDDHALTGASDSRVILWKDVTEAEQA 530
Score = 147 (56.8 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 85/353 (24%), Positives = 144/353 (40%)
Query: 46 LKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
L H V +++++ G TM+SS G DK +W +S T S + E
Sbjct: 99 LTAHYSAVTSLAFSADGHTMLSS-GRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEP 157
Query: 105 WSPCGN-----FIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLAT 158
S G + +A T VW+ SGQ A G E+ T + + T
Sbjct: 158 VSQLGVKSPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLT 217
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF-HPFDNILASASYDDTVKLFKEDK 217
+ D ++ ++E + ++V VRF P D+ + AS +K+F E +
Sbjct: 218 ATADHNLLLYEARS---LRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVF-ELQ 273
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN----SAGIPTP 273
A I L HT V +L R G A+C+ D +V+IW+ K G + + T
Sbjct: 274 TSACQI----LHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMLKESFLVTG 329
Query: 274 DND---SVW---KCVCT--LSGHHGRTIYDISW---CHLTDL--IATACGDDAIRIFKEN 320
D +W K + + + +G + CH D+ +A A D + ++
Sbjct: 330 SQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQD 389
Query: 321 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
A + L+ H + + CV ++P+ +LA+ S DG +KLW ++
Sbjct: 390 RTAKLWALPQCQLLGV-FSGHRRGLWCVQFSPM-DQVLATASADGTIKLWALQ 440
>POMBASE|SPAC12G12.14c [details] [associations]
symbol:pfs2 "WD repeat protein Pfs2" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=ISO] [GO:0006379 "mRNA
cleavage" evidence=ISO] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC12G12.14c GO:GO:0005829 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006378 GO:GO:0000070 GO:GO:2000045 GO:GO:0005847
GO:GO:0006379 KO:K15542 HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD
PIR:T37587 RefSeq:NP_592884.1 ProteinModelPortal:Q9UTN4
STRING:Q9UTN4 EnsemblFungi:SPAC12G12.14c.1 GeneID:2543089
KEGG:spo:SPAC12G12.14c OMA:TALCTQW NextBio:20804117 Uniprot:Q9UTN4
Length = 509
Score = 220 (82.5 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 60/247 (24%), Positives = 116/247 (46%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N + ++ H+ V +V+++P + + +D ++++W +F + + + GH ++
Sbjct: 156 NVKIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVW---NF--HMSTEELKLTGHGWDVK 210
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATC 159
W P +AS S D WD R+G C ATL GH+N + ++ KN +LAT
Sbjct: 211 TVDWHPSKGLLASGSKDNLVKFWDPRTGT--CIATLHGHKNTIMQASFQKNFGSNYLATV 268
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDK- 217
SRD + V+++ + V+ H +DV V +HP + N+L + D +V + D+
Sbjct: 269 SRDSTCRVFDLRAMKDVR---VLRGHEKDVNCVTWHPLYPNLLTTGGSDGSVNHYSLDEP 325
Query: 218 -----------------AEADWINFATLK---SHTSTVWSLAFDRIGSRLATCSDDATVK 257
+ + ++ + T + +H +WS+ + +G L T S+D T +
Sbjct: 326 PLLSQQKYHEKHPNVTLSASSYLLYPTAEIPFAHDLGIWSMQYHPLGHLLCTGSNDKTTR 385
Query: 258 IWKEYKP 264
W +P
Sbjct: 386 FWSRSRP 392
Score = 183 (69.5 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 57/206 (27%), Positives = 88/206 (42%)
Query: 56 VSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA 115
V W P G + + LW +F + +++ H +R WS G ++ S
Sbjct: 87 VRWTPDGRRLLTGSSTGEFTLWNGLTFNFE-----LINQSHDYAVRCAEWSTDGRWLISG 141
Query: 116 SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175
++ + ++ HE EV+ V +S N T S D S+ VW E
Sbjct: 142 DGGGMVKYFEPNLNNVKI---VQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMSTE 198
Query: 176 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTV 235
+ H DVK V +HP +LAS S D+ VK + D I ATL H +T+
Sbjct: 199 ---ELKLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFW--DPRTGTCI--ATLHGHKNTI 251
Query: 236 WSLAFDR-IGSR-LATCSDDATVKIW 259
+F + GS LAT S D+T +++
Sbjct: 252 MQASFQKNFGSNYLATVSRDSTCRVF 277
Score = 107 (42.7 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 37/163 (22%), Positives = 69/163 (42%)
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ I W+P G + + S +W+ + FE + H+ V+ WS +G++L
Sbjct: 81 RHVINVVRWTPDGRRLLTGSSTGEFTLWNGLTFNFEL--INQSHDYAVRCAEWSTDGRWL 138
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+ V +E + ++ AH +V+ V F P D+ +AS D ++K++
Sbjct: 139 ISGDGGGMVKYFEPNLNN----VKIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFH 194
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ + L H V ++ + LA+ S D VK W
Sbjct: 195 MSTEE----LKLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFW 233
Score = 104 (41.7 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 29/94 (30%), Positives = 44/94 (46%)
Query: 281 CVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH TI S+ ++ +AT D R+F D+ + V
Sbjct: 240 CIATLHGHKN-TIMQASFQKNFGSNYLATVSRDSTCRVF---------DLRAMKDVRVL- 288
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
R H +DVNCV W+P+ P +L + DG V + +
Sbjct: 289 RGHEKDVNCVTWHPLYPNLLTTGGSDGSVNHYSL 322
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 216 (81.1 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 63/211 (29%), Positives = 101/211 (47%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH+ V V+++P G +++S DK +R+W G +A H T+R +
Sbjct: 90 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRA-----HTATVRSVHFCS 144
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G +AS D T VW +F + L H N V+ +S +G+ + + S DK+V +
Sbjct: 145 DGQSFVTASDDKTIKVWSTHRQKFLFS--LSQHINWVRCAKFSPDGRLIVSASDDKTVKL 202
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 227
W+ + EC H V V FHP +A+A D+TVK++ D +
Sbjct: 203 WD---KTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVW--DVRTHRLLQHYQ 257
Query: 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
L H++ V +L+F G+ L T S D+T+KI
Sbjct: 258 L--HSAAVNALSFHPSGNYLVTASSDSTLKI 286
Score = 211 (79.3 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 66/218 (30%), Positives = 92/218 (42%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S + H V +V + G + +DK I++W KF LS H +R
Sbjct: 127 STVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR--QKFLFS--LSQ-HINWVRC 181
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G I SAS D T +WDK S EC + H V V + +G +A D
Sbjct: 182 AKFSPDGRLIVSASDDKTVKLWDKTSR--ECVHSYCEHGGFVTYVDFHPSGTCVAAAGMD 239
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+V VW+V + H V + FHP N L +AS D T+K+ D E
Sbjct: 240 NTVKVWDVRT---HRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKIL--DLMEGRL 294
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
+ TL H ++AF R G A+ D V +WK
Sbjct: 295 LY--TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 330
Score = 190 (71.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 59/214 (27%), Positives = 98/214 (45%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH+ V V ++ ++S D + +W K ++A GH+ + +S
Sbjct: 47 KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHM-----KPQSRAYRFTGHKDAVTCVNFS 101
Query: 107 PCGNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
P G+ +AS S D T +W G+ + H V+SV + +GQ T S DK++
Sbjct: 102 PSGHLLASGSRDKTVRIWVPNIKGE---STVFRAHTATVRSVHFCSDGQSFVTASDDKTI 158
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
VW + + ++ HI V+ +F P ++ SAS D TVKL+ DK + ++
Sbjct: 159 KVWSTHRQ---KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRECVH- 212
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ H V + F G+ +A D TVK+W
Sbjct: 213 -SYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVW 245
Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 41/127 (32%), Positives = 64/127 (50%)
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
+GH + V V +S N + LA+ S D + VW + + A H V V F P
Sbjct: 47 KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSR---AYRFTGHKDAVTCVNFSPS 103
Query: 198 DNILASASYDDTVKLFKED-KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
++LAS S D TV+++ + K E+ ++HT+TV S+ F G T SDD T+
Sbjct: 104 GHLLASGSRDKTVRIWVPNIKGES-----TVFRAHTATVRSVHFCSDGQSFVTASDDKTI 158
Query: 257 KIWKEYK 263
K+W ++
Sbjct: 159 KVWSTHR 165
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 221 (82.9 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 65/220 (29%), Positives = 102/220 (46%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T GH+ ++++ ++ G I S DK ++W E FT G + + A
Sbjct: 364 TFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTL-GNEEVGPKNGVTSVA 422
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
SP G +A+ S D +WD ++G F EGH + V SV +S +G+ LA+ S DKS
Sbjct: 423 MSPDGRLVAAGSLDNIVRLWDAQTGYFL--ERYEGHLDSVYSVAFSPDGKSLASGSLDKS 480
Query: 165 VWVWEV-GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
+ +W++ G C A N H V V F P + L S S D +V+ + +
Sbjct: 481 LKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMM 540
Query: 224 NFATLKSHTSTVWSLAFD-RIGSR--LATCSDDATVKIWK 260
L+ H ++V S+A + S AT S D ++WK
Sbjct: 541 ----LQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWK 576
Score = 199 (75.1 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 63/209 (30%), Positives = 94/209 (44%)
Query: 55 NVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIAS 114
+V ++P G +++ EDK +++W + + T GH+ I +S G FI S
Sbjct: 332 SVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFY-----GHELDIYSLDYSSDGRFIVS 386
Query: 115 ASFDATTAVWDKRSGQFECNATLEGHE----NEVKSVTWSKNGQFLATCSRDKSVWVWEV 170
S D +WD G+ C TL E N V SV S +G+ +A S D V +W+
Sbjct: 387 GSGDKKAKIWDIEKGK--CAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDA 444
Query: 171 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS 230
+ Y H+ V V F P LAS S D ++KL+ + + AT
Sbjct: 445 --QTGYFLERY-EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNG 501
Query: 231 HTSTVWSLAFDRIGSRLATCSDDATVKIW 259
H V S+AF GS L + S D +V+ W
Sbjct: 502 HKDFVLSVAFSPDGSWLISGSKDRSVQFW 530
Score = 182 (69.1 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 51/175 (29%), Positives = 88/175 (50%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
G + V +V+ +P G ++++ D +RLW ++ F + +GH ++ A+SP
Sbjct: 413 GPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQT--GYFLERY---EGHLDSVYSVAFSP 467
Query: 108 CGNFIASASFDATTAVWD---KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
G +AS S D + +WD RS + C AT GH++ V SV +S +G +L + S+D+S
Sbjct: 468 DGKSLASGSLDKSLKLWDLSGSRS-RSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRS 526
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN---ILASASYDDTVKLFKED 216
V W+ + ++ H V V P +N + A+ S D +L+K D
Sbjct: 527 VQFWDPRNGTTH---MMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWKYD 578
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 220 (82.5 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 68/226 (30%), Positives = 105/226 (46%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ TL H+G ++ + WN +G I S G DK +W + G AK H +
Sbjct: 269 ASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT-GE---AKQQFPF-HSAPALD 323
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
W F AS D V R G T +GH NEV ++ W +G LA+CS D
Sbjct: 324 VDWQNNTTF-ASCGTDMCIHVC--RLGCDLPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 380
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----DN-----ILASASYDDTVKLF 213
++ +W + ++ C + AH +++ +++ P N +LASAS+D TV+L+
Sbjct: 381 MTLKIWSMKQD---ACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 437
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
++ + TL H V+S+AF G LA+ S D V IW
Sbjct: 438 DVEQG----VCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCVHIW 479
Score = 198 (74.8 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 57/228 (25%), Positives = 103/228 (45%)
Query: 42 NSQT-LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS----DG- 95
N T L+GH+ V+ +WNP +++S D R+W N + + +L +G
Sbjct: 170 NKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGW 229
Query: 96 HQ----RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK 151
H + + W+ G +A S+D +W + +G +TL H+ + ++ W+K
Sbjct: 230 HDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTE-NGNLA--STLGQHKGPIFALKWNK 286
Query: 152 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVK 211
G ++ + DK+ +W+ + + +A DV F AS D +
Sbjct: 287 KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF----ASCGTDMCIH 342
Query: 212 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ + D + T + HT+ V ++ +D G LA+CSDD T+KIW
Sbjct: 343 VCR---LGCD-LPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 386
Score = 126 (49.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 36/134 (26%), Positives = 60/134 (44%)
Query: 46 LKGHQGRVWNVSWNPQGT---------MISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
L+ H ++ + W+P G M++S D +RLW E G L+ H
Sbjct: 397 LQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQ-G---VCTHTLTK-H 451
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
Q + A+SP G ++AS SFD +W+ +SG + +G + V W+ G +
Sbjct: 452 QEPVYSIAFSPDGKYLASGSFDKCVHIWNTQSGSLV--HSYQG-TGGIFEVCWNARGDKV 508
Query: 157 ATCSRDKSVWVWEV 170
+ D SV V ++
Sbjct: 509 GASASDGSVCVLDL 522
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 223 (83.6 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 61/233 (26%), Positives = 109/233 (46%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRE 102
+TL GH G V++ S++P + S EDK +RLW + T A++S GH + +
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMD------THTALVSYKGHNHPVWD 572
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
++SP G++ A+AS D T +W GH N+V V++ NG ++ T S D
Sbjct: 573 VSFSPLGHYFATASHDQTARLWS--CDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSD 630
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
K+ +W+V D + H V + P L++ S D + ++ +
Sbjct: 631 KTCRMWDVSTGDSVR---LFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGK--- 684
Query: 223 INFATLKSH-TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274
++ H + ++SL++ + G+ L + D TV++W + K + PD
Sbjct: 685 -RLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVW-DLKKATTEPSAEPD 735
Score = 119 (46.9 bits), Expect = 0.00074, P = 0.00074
Identities = 32/128 (25%), Positives = 56/128 (43%)
Query: 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191
+C G ++ + WS +G L + ++ + ++++ C ++ H V
Sbjct: 477 DCRIAAAGFQDSYIKI-WSLDGSSL----NNPNIALNNNDKDEDPTCKTLVG-HSGTVYS 530
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251
F P + L S S D TV+L+ D A + K H VW ++F +G AT S
Sbjct: 531 TSFSPDNKYLLSGSEDKTVRLWSMDTHTA----LVSYKGHNHPVWDVSFSPLGHYFATAS 586
Query: 252 DDATVKIW 259
D T ++W
Sbjct: 587 HDQTARLW 594
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 179 (68.1 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 52/182 (28%), Positives = 86/182 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++ H V++ ++ G I+SCG DK ++++ E+ KA H+ + A+
Sbjct: 347 VRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKA-----HEDEVLCCAF 401
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ--FLATCSRDK 163
S FIA+ S D +W+ +G E + + H +V ++ N LAT S D
Sbjct: 402 SADDRFIATCSVDKKVKIWNSVTG--ELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDY 459
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA-EADW 222
+ +W++ ++ EC + H V RF P D +LAS S D T+KL+ A E
Sbjct: 460 FLKLWDLNQK---ECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKS 516
Query: 223 IN 224
IN
Sbjct: 517 IN 518
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 53/173 (30%), Positives = 80/173 (46%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
H + +S G IAS D T V+ +G E ++ HE+EV +S + +F
Sbjct: 350 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETG--EKLLEIKAHEDEVLCCAFSADDRF 407
Query: 156 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN--ILASASYDDTVKLF 213
+ATCS DK V +W E + H + V F N +LA+ S D +KL+
Sbjct: 408 IATCSVDKKVKIWN---SVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLW 464
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
++ E N T+ HT++V F LA+CS D T+K+W + K N
Sbjct: 465 DLNQKECR--N--TMFGHTNSVSHCRFSPDDKLLASCSADGTLKLW-DVKSAN 512
Score = 129 (50.5 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 46/167 (27%), Positives = 72/167 (43%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
H+ T+R ++ G + S+S D+ VW+ +S E +L+ H+ VK KN +
Sbjct: 747 HKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQS---EETVSLQAHQETVKDFRLLKNSRL 803
Query: 156 LATCSRDKSVWVWEV--GE-EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 212
L+ S D +V VW + G E ++ C H V P +S S D T K+
Sbjct: 804 LSW-SFDGTVKVWNIITGRIEKDFVC------HQDTVLSCDISPDATKFSSTSADKTAKI 856
Query: 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ D L+ H V AF + LAT D+ ++IW
Sbjct: 857 WSFDLLSP----LHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIW 899
Score = 94 (38.1 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 39/163 (23%), Positives = 70/163 (42%)
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK---EYKPGNSAGIPTPDNDSVWKC 281
F + H +TV + F G + + SDD+ +++W E A T + + K
Sbjct: 741 FQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETVSLQAHQETVKDFRLLKN 800
Query: 282 VCTLSGHHGRTI--YDISW--------CHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 331
LS T+ ++I CH +++ DA + F + + SF
Sbjct: 801 SRLLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATK-FSSTSADKTAKIWSF 859
Query: 332 DLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
DL+ H R H V C A++ V +LA+ D+G++++W +
Sbjct: 860 DLLSPLHELRGHKGCVRCSAFS-VDSTLLATGDDNGEIRIWNV 901
Score = 90 (36.7 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 25/79 (31%), Positives = 34/79 (43%)
Query: 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240
V+ H V F +AS D T+++FK + E +K+H V AF
Sbjct: 346 VVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGE----KLLEIKAHEDEVLCCAF 401
Query: 241 DRIGSRLATCSDDATVKIW 259
+ATCS D VKIW
Sbjct: 402 SADDRFIATCSVDKKVKIW 420
Score = 89 (36.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 32/136 (23%), Positives = 56/136 (41%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
E++ S Q + + N ++++ D ++LW K + GH
Sbjct: 426 ELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLW---DLNQKECRNTMF--GHTN 480
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSG---------QFECNA--TLEGHENEVKSV 147
++ +SP +AS S D T +WD +S QF N+ + E E VK
Sbjct: 481 SVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQEDMEVMVKCC 540
Query: 148 TWSKNGQFLATCSRDK 163
+WS +G L +++K
Sbjct: 541 SWSADGASLVVAAKNK 556
Score = 77 (32.2 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 26/86 (30%), Positives = 42/86 (48%)
Query: 296 ISWCHLTD-----LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350
++ CH T+ L+AT D ++++ N + + M HT +H C +
Sbjct: 438 VNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFG----HTNSVSH-----C-RF 487
Query: 351 NPVVPGMLASCSDDGDVKLWQIKLEN 376
+P +LASCS DG +KLW +K N
Sbjct: 488 SPD-DKLLASCSADGTLKLWDVKSAN 512
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 217 (81.4 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 73/286 (25%), Positives = 125/286 (43%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD--GHQRTIRE 102
T +GH + +SW+P G I+S +DK IRLW N T KA + GH +
Sbjct: 213 TFEGHLAGISTISWSPDGATIASGSDDKTIRLW------NVLTGKAHPTPFIGHHNYVYA 266
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
A+SP GN + S S+D +WD RS + +L H + V + +G +A+C+ D
Sbjct: 267 IAFSPKGNMLVSGSYDEAVFLWDVRSARVM--KSLPAHSDPVSGIDVVWDGTLIASCATD 324
Query: 163 KSVWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 221
V +W+ +C +++ V V+F P + + + DD V+L+ D E
Sbjct: 325 GLVRIWDTSTG---QCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLW--DYVEGR 379
Query: 222 WINFATLKSHTSTVWSL--AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
+ T + H++ +SL AF G + + + G+ G +
Sbjct: 380 CLK--TYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAV-----SGSEDGAILCWDVVTK 432
Query: 280 KCVCTLSGHHGRTIYDISWCHLTD-LIATACG-DDAIRIFKE-NPE 322
K + + H G + + C + +CG D +R+++E PE
Sbjct: 433 KVLQRIEAHDG-VVLGVDTCSTGEGRFMVSCGLDGTVRVWEEVGPE 477
Score = 185 (70.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 59/221 (26%), Positives = 102/221 (46%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRETA 104
L+GH V V ++P +MI+S G D +++W T K I + +GH I +
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAAS------TGKLIYTFEGHLAGISTIS 225
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WSP G IAS S D T +W+ +G+ + GH N V ++ +S G L + S D++
Sbjct: 226 WSPDGATIASGSDDKTIRLWNVLTGKAHPTPFI-GHHNYVYAIAFSPKGNMLVSGSYDEA 284
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V++W+V + + AH V + ++AS + D V+++ D + +
Sbjct: 285 VFLWDVRSARVMKS---LPAHSDPVSGIDVVWDGTLIASCATDGLVRIW--DTSTGQCLR 339
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
+ V S+ F G + + D V++W +Y G
Sbjct: 340 -TLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLW-DYVEG 378
Score = 42 (19.8 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 358 LASCSDDGDVKLWQ 371
+ SC DG V++W+
Sbjct: 459 MVSCGLDGTVRVWE 472
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 201 (75.8 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 55/202 (27%), Positives = 98/202 (48%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ +L+GH V +V+++P G ++S D +R W + FT + GH+ +
Sbjct: 58 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQ-----GHRHWVLS 112
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK---NGQ--FLA 157
+WSP G +AS + +WD +G+ + L GH + ++W N + ++A
Sbjct: 113 ISWSPDGKTLASGCKNGQILLWDPSTGK-QVGRVLAGHSKWITGLSWEPLHANPECRYMA 171
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217
+ S+D SV VW+ C ++ H Q V +R+ D +L SAS D T+K+++
Sbjct: 172 SSSKDGSVRVWDTTAG---RCERILTGHTQSVTCLRWGG-DGLLYSASQDRTIKVWRAH- 226
Query: 218 AEADWINFATLKSHTSTVWSLA 239
D + TL+ H V ++A
Sbjct: 227 ---DGVLCRTLQGHGHWVNTMA 245
Score = 182 (69.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 88/355 (24%), Positives = 153/355 (43%)
Query: 45 TLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
T +GH+ V ++SW+P G T+ S C ++ I LW S G + +L+ GH + I
Sbjct: 102 TCQGHRHWVLSISWSPDGKTLASGC-KNGQILLWDP-STGKQ--VGRVLA-GHSKWITGL 156
Query: 104 AWSPC-GN----FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
+W P N ++AS+S D + VWD +G+ C L GH V + W +G L +
Sbjct: 157 SWEPLHANPECRYMASSSKDGSVRVWDTTAGR--CERILTGHTQSVTCLRWGGDG-LLYS 213
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
S+D+++ VW D C + H V + D L + +++
Sbjct: 214 ASQDRTIKVWRA--HDGVLCRT-LQGHGHWVNTMALST-DYALRTGAFEPAEASINAQDL 269
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW---KEYKP-----GNSAGI 270
+ + LK ++L + RL + SDD T+ +W ++ KP G+ A I
Sbjct: 270 QG---SLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALI 326
Query: 271 P----TPDND-----SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321
+PD+ S K + G G+ + + H+ + A D+ R+
Sbjct: 327 NQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRG-HVAAVYQIAWSADS-RLLVSG- 383
Query: 322 EAGDSDMVSFDLVHTEHRA----HNQDVNCVAWNPVVPGM-LASCSDDGDVKLWQ 371
+ DS + +D+ + A H +V V W+P G +AS D +++W+
Sbjct: 384 -SSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP--DGQRVASGGKDKCLRIWR 435
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 74/304 (24%), Positives = 130/304 (42%)
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWD--KRSGQFECNATLEGHENEVKSVTWSK 151
+GH + A+SP G ++AS S D T WD + F C +GH + V S++WS
Sbjct: 62 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----QGHRHWVLSISWSP 117
Query: 152 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-----NILASASY 206
+G+ LA+ ++ + +W+ + V+ H + + + + P +AS+S
Sbjct: 118 DGKTLASGCKNGQILLWDPSTGKQV--GRVLAGHSKWITGLSWEPLHANPECRYMASSSK 175
Query: 207 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
D +V+++ + I L HT +V L + G L + S D T+K+W+ + +
Sbjct: 176 DGSVRVWDTTAGRCERI----LTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAH---D 227
Query: 267 SAGIPTPDNDSVWKCVCTLSGHHG-RT-IYDISWCHLT--DLIATA--CGDDAIRIFK-- 318
T W LS + RT ++ + + DL + D A+R +
Sbjct: 228 GVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLV 287
Query: 319 --ENPE---AGDSDMVSFDLVHTEHR-------AHNQDVNCVAWNPVVPGMLASCSDDGD 366
+ PE +G D F E + H +N V ++P ++AS S D
Sbjct: 288 RGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPD-SRIIASASFDKS 346
Query: 367 VKLW 370
+KLW
Sbjct: 347 IKLW 350
Score = 174 (66.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 49/171 (28%), Positives = 82/171 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q LK R +N+ + S +D + +W K A+ GHQ I +
Sbjct: 274 QELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAE-DKKPLARMT---GHQALINQV 329
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+SP IASASFD + +WD R+G++ A+L GH V + WS + + L + S D
Sbjct: 330 LFSPDSRIIASASFDKSIKLWDGRTGKYL--ASLRGHVAAVYQIAWSADSRLLVSGSSDS 387
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
++ VW+V + + AA + H +V V + P +AS D +++++
Sbjct: 388 TLKVWDVKAQ---KLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 435
Score = 119 (46.9 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 44/171 (25%), Positives = 75/171 (43%)
Query: 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED-EYECAAVINAHIQDVKK 191
C ++LEGH V SV +S G++LA+ S D +V W++ E + C H V
Sbjct: 57 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----QGHRHWVLS 112
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR----- 246
+ + P LAS + + L+ D + + L H+ + L+++ + +
Sbjct: 113 ISWSPDGKTLASGCKNGQILLW--DPSTGKQVG-RVLAGHSKWITGLSWEPLHANPECRY 169
Query: 247 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 297
+A+ S D +V++W + G I T SV C G G +Y S
Sbjct: 170 MASSSKDGSVRVW-DTTAGRCERILTGHTQSV---TCLRWGGDG-LLYSAS 215
Score = 57 (25.1 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377
R H V +AW+ +L S S D +K+W +K + L
Sbjct: 362 RGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKL 399
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 225 (84.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 63/231 (27%), Positives = 111/231 (48%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
M N + + H+ + S++P ++C +D +R+W F + + IL GH
Sbjct: 192 MNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW---DF-LRCHEERILR-GHGAD 246
Query: 100 IRETAWSPCGNFIASASFDATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 157
++ W P + S S D+ + WD ++GQ ATL H+N V V + NG +L
Sbjct: 247 VKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ--SLATLHAHKNTVMEVKLNLNGNWLL 304
Query: 158 TCSRDKSVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKE 215
T SRD ++++ ++E + V H ++ V +HP + + AS D ++ LF
Sbjct: 305 TASRDHLCKLFDIRNLKEELQ---VFRGHKKEATAVAWHPVHEGLFASGGSDGSL-LFWH 360
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
E + + + +H +WSLA+ +G L + S+D T K W +PG+
Sbjct: 361 VGVEKE-VGGMEM-AHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 409
Score = 165 (63.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 51/208 (24%), Positives = 85/208 (40%)
Query: 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI 112
V+ V W P+G + + LW G F + IL H +R WS ++
Sbjct: 122 VFVVRWTPEGRRLVTGASSGEFTLWN----GLTFNFETILQ-AHDSPVRAMTWSHNDMWM 176
Query: 113 ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172
+A W + + H+ ++ ++S ATCS D +V +W+
Sbjct: 177 LTADHGGYVKYWQSNMNNVKM---FQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR 233
Query: 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL-FKEDKAEADWINFATLKSH 231
E ++ H DVK V +HP ++ S S D + F + K + ATL +H
Sbjct: 234 CHEER---ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ---SLATLHAH 287
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIW 259
+TV + + G+ L T S D K++
Sbjct: 288 KNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Score = 140 (54.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 45/202 (22%), Positives = 88/202 (43%)
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
W+P G + + + +W+ + FE L+ H++ V+++TWS N ++ T
Sbjct: 127 WTPEGRRLVTGASSGEFTLWNGLTFNFE--TILQAHDSPVRAMTWSHNDMWMLTADHGGY 184
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V W+ + + AH + +++ F P DN A+ S D TV+++ + + I
Sbjct: 185 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERI- 239
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDAT--VKIWKEYKPGNSAGIPTPDNDSVWKCV 282
L+ H + V + + + + S D+ +K W + K G S ++V +
Sbjct: 240 ---LRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-DPKTGQSLATLHAHKNTVMEVK 295
Query: 283 CTLSGHHGRTIYDISWCHLTDL 304
L+G+ T C L D+
Sbjct: 296 LNLNGNWLLTASRDHLCKLFDI 317
Score = 85 (35.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
R H ++ VAW+PV G+ AS DG + W + +E
Sbjct: 328 RGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVE 364
Score = 43 (20.2 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS--DMVSFDLVH--TEHRAHNQ 343
H G I+ ++W L ++ + D + + N GD D + +L+ +E
Sbjct: 374 HEGM-IWSLAWHPLGHILCSGSNDHTSKFWTRN-RPGDKMRDRYNLNLLPGMSEDGVEYD 431
Query: 344 DV--NCVAWNPVVPGM 357
D+ N +A V+PGM
Sbjct: 432 DLEPNSLA---VIPGM 444
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 225 (84.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 63/231 (27%), Positives = 111/231 (48%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
M N + + H+ + S++P ++C +D +R+W F + + IL GH
Sbjct: 188 MNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW---DF-LRCHEERILR-GHGAD 242
Query: 100 IRETAWSPCGNFIASASFDATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 157
++ W P + S S D+ + WD ++GQ ATL H+N V V + NG +L
Sbjct: 243 VKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ--SLATLHAHKNTVMEVKLNLNGNWLL 300
Query: 158 TCSRDKSVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKE 215
T SRD ++++ ++E + V H ++ V +HP + + AS D ++ LF
Sbjct: 301 TASRDHLCKLFDIRNLKEELQ---VFRGHKKEATAVAWHPVHEGLFASGGSDGSL-LFWH 356
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
E + + + +H +WSLA+ +G L + S+D T K W +PG+
Sbjct: 357 VGVEKE-VGGMEM-AHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 405
Score = 165 (63.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 51/208 (24%), Positives = 85/208 (40%)
Query: 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI 112
V+ V W P+G + + LW G F + IL H +R WS ++
Sbjct: 118 VFVVRWTPEGRRLVTGASSGEFTLWN----GLTFNFETILQ-AHDSPVRAMTWSHNDMWM 172
Query: 113 ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172
+A W + + H+ ++ ++S ATCS D +V +W+
Sbjct: 173 LTADHGGYVKYWQSNMNNVKM---FQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR 229
Query: 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL-FKEDKAEADWINFATLKSH 231
E ++ H DVK V +HP ++ S S D + F + K + ATL +H
Sbjct: 230 CHEER---ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ---SLATLHAH 283
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIW 259
+TV + + G+ L T S D K++
Sbjct: 284 KNTVMEVKLNLNGNWLLTASRDHLCKLF 311
Score = 140 (54.3 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 45/202 (22%), Positives = 88/202 (43%)
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
W+P G + + + +W+ + FE L+ H++ V+++TWS N ++ T
Sbjct: 123 WTPEGRRLVTGASSGEFTLWNGLTFNFE--TILQAHDSPVRAMTWSHNDMWMLTADHGGY 180
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V W+ + + AH + +++ F P DN A+ S D TV+++ + + I
Sbjct: 181 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERI- 235
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDAT--VKIWKEYKPGNSAGIPTPDNDSVWKCV 282
L+ H + V + + + + S D+ +K W + K G S ++V +
Sbjct: 236 ---LRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-DPKTGQSLATLHAHKNTVMEVK 291
Query: 283 CTLSGHHGRTIYDISWCHLTDL 304
L+G+ T C L D+
Sbjct: 292 LNLNGNWLLTASRDHLCKLFDI 313
Score = 85 (35.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
R H ++ VAW+PV G+ AS DG + W + +E
Sbjct: 324 RGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVE 360
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS--DMVSFDLVH--TEHRAHNQ 343
H G I+ ++W L ++ + D + + N GD D + +L+ +E
Sbjct: 370 HEGM-IWSLAWHPLGHILCSGSNDHTSKFWTRN-RPGDKMRDRYNLNLLPGMSEDGVEYD 427
Query: 344 DV--NCVAWNPVVPGM 357
D+ N +A V+PGM
Sbjct: 428 DLEPNSLA---VIPGM 440
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 225 (84.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 63/231 (27%), Positives = 111/231 (48%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
M N + + H+ + S++P ++C +D +R+W F + + IL GH
Sbjct: 192 MNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW---DF-LRCHEERILR-GHGAD 246
Query: 100 IRETAWSPCGNFIASASFDATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 157
++ W P + S S D+ + WD ++GQ ATL H+N V V + NG +L
Sbjct: 247 VKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ--SLATLHAHKNTVMEVKLNLNGNWLL 304
Query: 158 TCSRDKSVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKE 215
T SRD ++++ ++E + V H ++ V +HP + + AS D ++ LF
Sbjct: 305 TASRDHLCKLFDIRNLKEELQ---VFRGHKKEATAVAWHPVHEGLFASGGSDGSL-LFWH 360
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
E + + + +H +WSLA+ +G L + S+D T K W +PG+
Sbjct: 361 VGVEKE-VGGMEM-AHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 409
Score = 165 (63.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 51/208 (24%), Positives = 85/208 (40%)
Query: 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI 112
V+ V W P+G + + LW G F + IL H +R WS ++
Sbjct: 122 VFVVRWTPEGRRLVTGASSGEFTLWN----GLTFNFETILQ-AHDSPVRAMTWSHNDMWM 176
Query: 113 ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172
+A W + + H+ ++ ++S ATCS D +V +W+
Sbjct: 177 LTADHGGYVKYWQSNMNNVKM---FQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR 233
Query: 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL-FKEDKAEADWINFATLKSH 231
E ++ H DVK V +HP ++ S S D + F + K + ATL +H
Sbjct: 234 CHEER---ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ---SLATLHAH 287
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIW 259
+TV + + G+ L T S D K++
Sbjct: 288 KNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Score = 140 (54.3 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 45/202 (22%), Positives = 88/202 (43%)
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
W+P G + + + +W+ + FE L+ H++ V+++TWS N ++ T
Sbjct: 127 WTPEGRRLVTGASSGEFTLWNGLTFNFE--TILQAHDSPVRAMTWSHNDMWMLTADHGGY 184
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V W+ + + AH + +++ F P DN A+ S D TV+++ + + I
Sbjct: 185 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERI- 239
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDAT--VKIWKEYKPGNSAGIPTPDNDSVWKCV 282
L+ H + V + + + + S D+ +K W + K G S ++V +
Sbjct: 240 ---LRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-DPKTGQSLATLHAHKNTVMEVK 295
Query: 283 CTLSGHHGRTIYDISWCHLTDL 304
L+G+ T C L D+
Sbjct: 296 LNLNGNWLLTASRDHLCKLFDI 317
Score = 85 (35.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
R H ++ VAW+PV G+ AS DG + W + +E
Sbjct: 328 RGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVE 364
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS--DMVSFDLVH--TEHRAHNQ 343
H G I+ ++W L ++ + D + + N GD D + +L+ +E
Sbjct: 374 HEGM-IWSLAWHPLGHILCSGSNDHTSKFWTRN-RPGDKMRDRYNLNLLPGMSEDGVEYD 431
Query: 344 DV--NCVAWNPVVPGM 357
D+ N +A V+PGM
Sbjct: 432 DLEPNSLA---VIPGM 444
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 225 (84.3 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 63/231 (27%), Positives = 111/231 (48%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
M N + + H+ + S++P ++C +D +R+W F + + IL GH
Sbjct: 192 MNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW---DF-LRCHEERILR-GHGAD 246
Query: 100 IRETAWSPCGNFIASASFDATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 157
++ W P + S S D+ + WD ++GQ ATL H+N V V + NG +L
Sbjct: 247 VKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ--SLATLHAHKNTVMEVKLNLNGNWLL 304
Query: 158 TCSRDKSVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKE 215
T SRD ++++ ++E + V H ++ V +HP + + AS D ++ LF
Sbjct: 305 TASRDHLCKLFDIRNLKEELQ---VFRGHKKEATAVAWHPVHEGLFASGGSDGSL-LFWH 360
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
E + + + +H +WSLA+ +G L + S+D T K W +PG+
Sbjct: 361 VGVEKE-VGGMEM-AHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 409
Score = 165 (63.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 51/208 (24%), Positives = 85/208 (40%)
Query: 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI 112
V+ V W P+G + + LW G F + IL H +R WS ++
Sbjct: 122 VFVVRWTPEGRRLVTGASSGEFTLWN----GLTFNFETILQ-AHDSPVRAMTWSHNDMWM 176
Query: 113 ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172
+A W + + H+ ++ ++S ATCS D +V +W+
Sbjct: 177 LTADHGGYVKYWQSNMNNVKM---FQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR 233
Query: 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL-FKEDKAEADWINFATLKSH 231
E ++ H DVK V +HP ++ S S D + F + K + ATL +H
Sbjct: 234 CHEER---ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ---SLATLHAH 287
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIW 259
+TV + + G+ L T S D K++
Sbjct: 288 KNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Score = 140 (54.3 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 45/202 (22%), Positives = 88/202 (43%)
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
W+P G + + + +W+ + FE L+ H++ V+++TWS N ++ T
Sbjct: 127 WTPEGRRLVTGASSGEFTLWNGLTFNFE--TILQAHDSPVRAMTWSHNDMWMLTADHGGY 184
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V W+ + + AH + +++ F P DN A+ S D TV+++ + + I
Sbjct: 185 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERI- 239
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDAT--VKIWKEYKPGNSAGIPTPDNDSVWKCV 282
L+ H + V + + + + S D+ +K W + K G S ++V +
Sbjct: 240 ---LRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-DPKTGQSLATLHAHKNTVMEVK 295
Query: 283 CTLSGHHGRTIYDISWCHLTDL 304
L+G+ T C L D+
Sbjct: 296 LNLNGNWLLTASRDHLCKLFDI 317
Score = 85 (35.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
R H ++ VAW+PV G+ AS DG + W + +E
Sbjct: 328 RGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVE 364
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS--DMVSFDLVH--TEHRAHNQ 343
H G I+ ++W L ++ + D + + N GD D + +L+ +E
Sbjct: 374 HEGM-IWSLAWHPLGHILCSGSNDHTSKFWTRN-RPGDKMRDRYNLNLLPGMSEDGVEYD 431
Query: 344 DV--NCVAWNPVVPGM 357
D+ N +A V+PGM
Sbjct: 432 DLEPNSLA---VIPGM 444
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 225 (84.3 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 63/231 (27%), Positives = 111/231 (48%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
M N + + H+ + S++P ++C +D +R+W F + + IL GH
Sbjct: 192 MNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW---DF-LRCHEERILR-GHGAD 246
Query: 100 IRETAWSPCGNFIASASFDATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 157
++ W P + S S D+ + WD ++GQ ATL H+N V V + NG +L
Sbjct: 247 VKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ--SLATLHAHKNTVMEVKLNLNGNWLL 304
Query: 158 TCSRDKSVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKE 215
T SRD ++++ ++E + V H ++ V +HP + + AS D ++ LF
Sbjct: 305 TASRDHLCKLFDIRNLKEELQ---VFRGHKKEATAVAWHPVHEGLFASGGSDGSL-LFWH 360
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
E + + + +H +WSLA+ +G L + S+D T K W +PG+
Sbjct: 361 VGVEKE-VGGMEM-AHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 409
Score = 165 (63.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 51/208 (24%), Positives = 85/208 (40%)
Query: 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI 112
V+ V W P+G + + LW G F + IL H +R WS ++
Sbjct: 122 VFVVRWTPEGRRLVTGASSGEFTLWN----GLTFNFETILQ-AHDSPVRAMTWSHNDMWM 176
Query: 113 ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172
+A W + + H+ ++ ++S ATCS D +V +W+
Sbjct: 177 LTADHGGYVKYWQSNMNNVKM---FQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR 233
Query: 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL-FKEDKAEADWINFATLKSH 231
E ++ H DVK V +HP ++ S S D + F + K + ATL +H
Sbjct: 234 CHEER---ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ---SLATLHAH 287
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIW 259
+TV + + G+ L T S D K++
Sbjct: 288 KNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Score = 140 (54.3 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 45/202 (22%), Positives = 88/202 (43%)
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
W+P G + + + +W+ + FE L+ H++ V+++TWS N ++ T
Sbjct: 127 WTPEGRRLVTGASSGEFTLWNGLTFNFE--TILQAHDSPVRAMTWSHNDMWMLTADHGGY 184
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V W+ + + AH + +++ F P DN A+ S D TV+++ + + I
Sbjct: 185 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERI- 239
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDAT--VKIWKEYKPGNSAGIPTPDNDSVWKCV 282
L+ H + V + + + + S D+ +K W + K G S ++V +
Sbjct: 240 ---LRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-DPKTGQSLATLHAHKNTVMEVK 295
Query: 283 CTLSGHHGRTIYDISWCHLTDL 304
L+G+ T C L D+
Sbjct: 296 LNLNGNWLLTASRDHLCKLFDI 317
Score = 85 (35.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
R H ++ VAW+PV G+ AS DG + W + +E
Sbjct: 328 RGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVE 364
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS--DMVSFDLVH--TEHRAHNQ 343
H G I+ ++W L ++ + D + + N GD D + +L+ +E
Sbjct: 374 HEGM-IWSLAWHPLGHILCSGSNDHTSKFWTRN-RPGDKMRDRYNLNLLPGMSEDGVEYD 431
Query: 344 DV--NCVAWNPVVPGM 357
D+ N +A V+PGM
Sbjct: 432 DLEPNSLA---VIPGM 444
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 225 (84.3 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 63/231 (27%), Positives = 111/231 (48%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
M N + + H+ + S++P ++C +D +R+W F + + IL GH
Sbjct: 192 MNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW---DF-LRCHEERILR-GHGAD 246
Query: 100 IRETAWSPCGNFIASASFDATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 157
++ W P + S S D+ + WD ++GQ ATL H+N V V + NG +L
Sbjct: 247 VKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ--SLATLHAHKNTVMEVKLNLNGNWLL 304
Query: 158 TCSRDKSVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKE 215
T SRD ++++ ++E + V H ++ V +HP + + AS D ++ LF
Sbjct: 305 TASRDHLCKLFDIRNLKEELQ---VFRGHKKEATAVAWHPVHEGLFASGGSDGSL-LFWH 360
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
E + + + +H +WSLA+ +G L + S+D T K W +PG+
Sbjct: 361 VGVEKE-VGGMEM-AHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 409
Score = 165 (63.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 51/208 (24%), Positives = 85/208 (40%)
Query: 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI 112
V+ V W P+G + + LW G F + IL H +R WS ++
Sbjct: 122 VFVVRWTPEGRRLVTGASSGEFTLWN----GLTFNFETILQ-AHDSPVRAMTWSHNDMWM 176
Query: 113 ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172
+A W + + H+ ++ ++S ATCS D +V +W+
Sbjct: 177 LTADHGGYVKYWQSNMNNVKM---FQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR 233
Query: 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL-FKEDKAEADWINFATLKSH 231
E ++ H DVK V +HP ++ S S D + F + K + ATL +H
Sbjct: 234 CHEER---ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ---SLATLHAH 287
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIW 259
+TV + + G+ L T S D K++
Sbjct: 288 KNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Score = 140 (54.3 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 45/202 (22%), Positives = 88/202 (43%)
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
W+P G + + + +W+ + FE L+ H++ V+++TWS N ++ T
Sbjct: 127 WTPEGRRLVTGASSGEFTLWNGLTFNFE--TILQAHDSPVRAMTWSHNDMWMLTADHGGY 184
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V W+ + + AH + +++ F P DN A+ S D TV+++ + + I
Sbjct: 185 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERI- 239
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDAT--VKIWKEYKPGNSAGIPTPDNDSVWKCV 282
L+ H + V + + + + S D+ +K W + K G S ++V +
Sbjct: 240 ---LRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-DPKTGQSLATLHAHKNTVMEVK 295
Query: 283 CTLSGHHGRTIYDISWCHLTDL 304
L+G+ T C L D+
Sbjct: 296 LNLNGNWLLTASRDHLCKLFDI 317
Score = 85 (35.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
R H ++ VAW+PV G+ AS DG + W + +E
Sbjct: 328 RGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVE 364
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS--DMVSFDLVH--TEHRAHNQ 343
H G I+ ++W L ++ + D + + N GD D + +L+ +E
Sbjct: 374 HEGM-IWSLAWHPLGHILCSGSNDHTSKFWTRN-RPGDKMRDRYNLNLLPGMSEDGVEYD 431
Query: 344 DV--NCVAWNPVVPGM 357
D+ N +A V+PGM
Sbjct: 432 DLEPNSLA---VIPGM 444
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 215 (80.7 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 63/211 (29%), Positives = 100/211 (47%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH+ V V+++P G +++S DK +R+W G +A H T+R +
Sbjct: 21 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRA-----HTATVRSVHFCS 75
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G +AS D T VW +F + L H N V+ +S +G+ + + S DK+V +
Sbjct: 76 DGQSFVTASDDKTVKVWATHRQKFLFS--LSQHINWVRCAKFSPDGRLIVSASDDKTVKL 133
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 227
W+ + EC H V V FHP +A+A D+TVK++ D +
Sbjct: 134 WD---KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW--DVRTHRLLQHYQ 188
Query: 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
L H++ V L+F G+ L T S D+T+KI
Sbjct: 189 L--HSAAVNGLSFHPSGNYLITASSDSTLKI 217
Score = 209 (78.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 65/218 (29%), Positives = 92/218 (42%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S + H V +V + G + +DK +++W KF LS H +R
Sbjct: 58 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHR--QKFLFS--LSQ-HINWVRC 112
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G I SAS D T +WDK S EC + H V V + +G +A D
Sbjct: 113 AKFSPDGRLIVSASDDKTVKLWDKSSR--ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMD 170
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+V VW+V + H V + FHP N L +AS D T+K+ D E
Sbjct: 171 NTVKVWDVRT---HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKIL--DLMEGRL 225
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
+ TL H ++AF R G A+ D V +WK
Sbjct: 226 LY--TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 261
Score = 179 (68.1 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 51/173 (29%), Positives = 83/173 (47%)
Query: 88 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKS 146
++A GH+ + +SP G+ +AS S D T +W G+ + H V+S
Sbjct: 14 SRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE---STVFRAHTATVRS 70
Query: 147 VTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 206
V + +GQ T S DK+V VW + + ++ HI V+ +F P ++ SAS
Sbjct: 71 VHFCSDGQSFVTASDDKTVKVWATHRQ---KFLFSLSQHINWVRCAKFSPDGRLIVSASD 127
Query: 207 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D TVKL+ DK+ + ++ + H V + F G+ +A D TVK+W
Sbjct: 128 DKTVKLW--DKSSRECVH--SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 176
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 43/142 (30%), Positives = 65/142 (45%)
Query: 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177
D+ VW + T GH++ V V +S +G LA+ SRDK+V +W + E
Sbjct: 2 DSCLMVWHMKPQSRAYRFT--GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE-- 57
Query: 178 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS 237
+ V AH V+ V F +AS D TVK++ + + +L H + V
Sbjct: 58 -STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKF----LFSLSQHINWVRC 112
Query: 238 LAFDRIGSRLATCSDDATVKIW 259
F G + + SDD TVK+W
Sbjct: 113 AKFSPDGRLIVSASDDKTVKLW 134
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED-KAEA 220
D + VW + + A H V V F P ++LAS S D TV+++ + K E+
Sbjct: 2 DSCLMVWHMKPQSR---AYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGES 58
Query: 221 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
++HT+TV S+ F G T SDD TVK+W ++
Sbjct: 59 -----TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHR 96
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 222 (83.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 73/301 (24%), Positives = 130/301 (43%)
Query: 8 ETLLDNQYLLPKTIPSTENLTGTN--LILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMI 65
E +LD ++L P + + +N + + + Q L GH V + +G +
Sbjct: 335 EEVLDVRFLGPN---DSHIIVASNSPCLKVFELQTLACQILHGHTDIVLALDVFRKGWLF 391
Query: 66 SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVW 124
+SC +D++IR+W G A GH ++ S +F+ + S D T +W
Sbjct: 392 ASCAKDQSIRIWRMNKAGQ--VACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLW 449
Query: 125 -------DKRSGQ------FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
K + + +T H+ ++ S+ S N + LAT S+D++ +W +
Sbjct: 450 PLPEALPSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSPNDKLLATGSQDRTAKLWAL- 508
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 231
+ + V + H + + V+F P D +LA+AS D T+KL+ A D+ T + H
Sbjct: 509 --PQCQLLGVFSGHRRGLWNVQFSPTDQVLATASADGTIKLW----ALQDFSCLKTFEGH 562
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 291
++V +AF G++L + D +K+W K D VW C+ H
Sbjct: 563 DASVLKVAFVSRGAQLLSSGSDGLLKLWT-IKSNECVRTLDAHEDKVWGLHCSRLDDHAI 621
Query: 292 T 292
T
Sbjct: 622 T 622
Score = 179 (68.1 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 88/345 (25%), Positives = 143/345 (41%)
Query: 46 LKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRET 103
L H V ++S++ G TM+SS G DK +W S+ T S + E
Sbjct: 191 LTAHYSAVTSLSFSEDGHTMLSS-GRDKICIVWDLRSYETSRTVPVFESVEASVLLPEEP 249
Query: 104 AWS----PCGNFIASASFDATTAVWDKRSGQFECNAT---LEGHENEVKSVTWSKNGQFL 156
A + G +A VW+ SGQ C T + G E+ T ++ L
Sbjct: 250 ALALGVKNSGLHFLTAGDQGILRVWEAASGQ--CVYTQPQMSGLRQELTHCTLARAAGLL 307
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF-HPFDNILASASYDDTVKLFKE 215
T + D ++ ++E + + ++V VRF P D+ + AS +K+F
Sbjct: 308 LTVTADHNLLLYEARS---LQLQKQFAGYSEEVLDVRFLGPNDSHIIVASNSPCLKVF-- 362
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275
E + L HT V +L R G A+C+ D +++IW+ K G A
Sbjct: 363 ---ELQTLACQILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQVA------- 412
Query: 276 DSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEA-------GDSD 327
CV SGH ++ I L + + T D ++++ PEA D D
Sbjct: 413 -----CVAQGSGHT-HSVGTICCSRLKESFLVTGSQDCTVKLWPL-PEALPSKNTASDGD 465
Query: 328 MVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
++ T+ R H++D+N +A +P +LA+ S D KLW +
Sbjct: 466 LIPLQAQSTQ-RCHDKDINSLAVSPN-DKLLATGSQDRTAKLWAL 508
Score = 159 (61.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 46/173 (26%), Positives = 69/173 (39%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
H + I A SP +A+ S D T +W Q + GH + +V +S Q
Sbjct: 478 HDKDINSLAVSPNDKLLATGSQDRTAKLW--ALPQCQLLGVFSGHRRGLWNVQFSPTDQV 535
Query: 156 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 215
LAT S D ++ +W + ++ C H V KV F L S+ D +KL+
Sbjct: 536 LATASADGTIKLWAL---QDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTI 592
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268
E TL +H VW L R+ T D+ + +WK+ A
Sbjct: 593 KSNEC----VRTLDAHEDKVWGLHCSRLDDHAITGGSDSRIILWKDVTEAEQA 641
Score = 150 (57.9 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 64/250 (25%), Positives = 107/250 (42%)
Query: 137 LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196
L GH + V ++ + G A+C++D+S+ +W + + + C A + H V +
Sbjct: 372 LHGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQVACVAQGSGHTHSVGTICCSR 431
Query: 197 F-DNILASASYDDTVKLF--------KEDKAEADWINF---ATLKSHTSTVWSLAFDRIG 244
++ L + S D TVKL+ K ++ D I +T + H + SLA
Sbjct: 432 LKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSPND 491
Query: 245 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 304
LAT S D T K+W +P + + SGH R ++++ + +
Sbjct: 492 KLLATGSQDRTAKLW---------ALPQ------CQLLGVFSGHR-RGLWNVQFSPTDQV 535
Query: 305 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSD 363
+ATA D I+++ + F + T H+ V VA+ V G L S
Sbjct: 536 LATASADGTIKLWA---------LQDFSCLKT-FEGHDASVLKVAF--VSRGAQLLSSGS 583
Query: 364 DGDVKLWQIK 373
DG +KLW IK
Sbjct: 584 DGLLKLWTIK 593
Score = 145 (56.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 40/171 (23%), Positives = 79/171 (46%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
+C+++ GH+ +WNV ++P ++++ D I+LW + F K +GH
Sbjct: 510 QCQLLG--VFSGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFS---CLKTF--EGH 562
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
++ + A+ G + S+ D +W +S EC TL+ HE++V + S+
Sbjct: 563 DASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSN--ECVRTLDAHEDKVWGLHCSRLDDHA 620
Query: 157 ATCSRDKSVWVW-EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 206
T D + +W +V E ++ E A ++ + ++ DN+L Y
Sbjct: 621 ITGGSDSRIILWKDVTEAEQAEEQAK-----REEQVIKQQELDNLLHEKRY 666
Score = 91 (37.1 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 28/125 (22%), Positives = 58/125 (46%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWG-KESFGNKFTAKAILSDGHQRTIRETAWSP 107
H V +++++ T++++ G D +R+W + +G G + A+ P
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFR------GSPGVVHLVAFHP 161
Query: 108 CGN--FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
+ S++ D + VW + C A L H + V S+++S++G + + RDK
Sbjct: 162 DPTRLLLFSSAVDTSIRVWSLQDRS--CLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKIC 219
Query: 166 WVWEV 170
VW++
Sbjct: 220 IVWDL 224
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 222 (83.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 77/303 (25%), Positives = 134/303 (44%)
Query: 8 ETLLDNQYLLPKTIPSTENLTGTNLILCSRCEMINS--QTLKGHQGRVWNVSWNPQGTMI 65
E +LD ++L P+ + + +N E+ S Q L GH V + +G +
Sbjct: 335 EEVLDVRFLGPE---DSHVVVASNSPCLKVFELQTSACQILHGHTDIVLALDVFRKGWLF 391
Query: 66 SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVW 124
+SC +D+++R+W G GH ++ S +F+ + S D T +W
Sbjct: 392 ASCAKDQSVRIWRMNKAGQVMCVAQ--GSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLW 449
Query: 125 -------DKRSGQ------FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
K + + T H+ ++ SV + N + LAT S+D++ +W +
Sbjct: 450 PLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWAL- 508
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 231
+ + V + H + + V+F P D +LA+AS D T+KL+ A D+ T + H
Sbjct: 509 --PQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLW----ALQDFSCLKTFEGH 562
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD--NDSVWKCVCTLSGHH 289
++V +AF G++L + D VK+W K N+ + T D D VW C+ H
Sbjct: 563 DASVLKVAFVSRGTQLLSSGSDGLVKLWT-IK--NNECVRTLDAHEDKVWGLHCSRLDDH 619
Query: 290 GRT 292
T
Sbjct: 620 ALT 622
Score = 160 (61.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 47/173 (27%), Positives = 69/173 (39%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
H + I A +P +A+ S D T +W Q + GH + V +S Q
Sbjct: 478 HDKDINSVAIAPNDKLLATGSQDRTAKLW--ALPQCQLLGVFSGHRRGLWCVQFSPMDQV 535
Query: 156 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 215
LAT S D ++ +W + ++ C H V KV F L S+ D VKL+
Sbjct: 536 LATASADGTIKLWAL---QDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTI 592
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268
E TL +H VW L R+ T + D+ V +WK+ A
Sbjct: 593 KNNEC----VRTLDAHEDKVWGLHCSRLDDHALTGASDSRVILWKDVTEAEQA 641
Score = 155 (59.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 85/342 (24%), Positives = 136/342 (39%)
Query: 46 LKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
L H V +++++ G TM+SS G DK +W +S T S + E
Sbjct: 191 LTAHYSAVTSLAFSADGHTMLSS-GRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEP 249
Query: 105 WSPCGN-----FIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLAT 158
S G + +A T VW+ SGQ A G E+ T + + T
Sbjct: 250 VSQLGVKSPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLT 309
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF-HPFDNILASASYDDTVKLFKEDK 217
+ D ++ ++E + ++V VRF P D+ + AS +K+F E +
Sbjct: 310 ATADHNLLLYEARS---LRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVF-ELQ 365
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 277
A I L HT V +L R G A+C+ D +V+IW+ K G
Sbjct: 366 TSACQI----LHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVM--------- 412
Query: 278 VWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK------ENPEAGDSDMVS 330
CV SGH ++ + L + + T D ++++ A D+ +
Sbjct: 413 ---CVAQGSGHT-HSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPIL 468
Query: 331 FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
T R H++D+N VA P +LA+ S D KLW +
Sbjct: 469 LQ-AQTTQRCHDKDINSVAIAPN-DKLLATGSQDRTAKLWAL 508
Score = 146 (56.5 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 42/171 (24%), Positives = 79/171 (46%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
+C+++ GH+ +W V ++P ++++ D I+LW + F K +GH
Sbjct: 510 QCQLLG--VFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFS---CLKTF--EGH 562
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
++ + A+ G + S+ D +W ++ EC TL+ HE++V + S+
Sbjct: 563 DASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNN--ECVRTLDAHEDKVWGLHCSRLDDHA 620
Query: 157 ATCSRDKSVWVW-EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 206
T + D V +W +V E ++ E A Q+ + VR DN+L Y
Sbjct: 621 LTGASDSRVILWKDVTEAEQAEEQAR-----QEEQVVRQQELDNLLHEKRY 666
Score = 137 (53.3 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 67/251 (26%), Positives = 105/251 (41%)
Query: 137 LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196
L GH + V ++ + G A+C++D+SV +W + + + C A + H V V
Sbjct: 372 LHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMCVAQGSGHTHSVGTVCCSR 431
Query: 197 F-DNILASASYDDTVKLFKEDKAEADWINFA------------TLKSHTSTVWSLAFDRI 243
++ L + S D TVKL+ KA N A T + H + S+A
Sbjct: 432 LKESFLVTGSQDCTVKLWPLPKALLSK-NTAPDNGPILLQAQTTQRCHDKDINSVAIAPN 490
Query: 244 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 303
LAT S D T K+W +P + + SGH R ++ + + +
Sbjct: 491 DKLLATGSQDRTAKLW---------ALPQ------CQLLGVFSGHR-RGLWCVQFSPMDQ 534
Query: 304 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCS 362
++ATA D I+++ + F + T H+ V VA+ V G L S
Sbjct: 535 VLATASADGTIKLWA---------LQDFSCLKT-FEGHDASVLKVAF--VSRGTQLLSSG 582
Query: 363 DDGDVKLWQIK 373
DG VKLW IK
Sbjct: 583 SDGLVKLWTIK 593
Score = 94 (38.1 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 29/125 (23%), Positives = 55/125 (44%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWG-KESFGNKFTAKAILSDGHQRTIRETAWSP 107
H V ++++P T++++ G D +R+W +G G + A+ P
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFR------GSPGVVHLVAFHP 161
Query: 108 CGN--FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
+ S++ DA VW + C A L H + V S+ +S +G + + RDK
Sbjct: 162 DPTRLLLFSSATDAAIRVWSLQDRS--CLAVLTAHYSAVTSLAFSADGHTMLSSGRDKIC 219
Query: 166 WVWEV 170
+W++
Sbjct: 220 IIWDL 224
Score = 77 (32.2 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 34/133 (25%), Positives = 58/133 (43%)
Query: 47 KGHQGRVWNVSWNPQGT--MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
+G G V V+++P T ++ S D IR+W S ++ + A+L+ H + A
Sbjct: 148 RGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVW---SLQDR-SCLAVLT-AHYSAVTSLA 202
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQ-------FEC-NATLEGHENEVKSVTWSKNGQFL 156
+S G+ + S+ D +WD +S Q FE A + E V + G +
Sbjct: 203 FSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYF 262
Query: 157 ATCSRDKSVWVWE 169
T ++ VWE
Sbjct: 263 LTAGDQGTLRVWE 275
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 225 (84.3 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 63/231 (27%), Positives = 111/231 (48%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
M N + + H+ + S++P ++C +D +R+W F + + IL GH
Sbjct: 193 MNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW---DF-LRCHEERILR-GHGAD 247
Query: 100 IRETAWSPCGNFIASASFDATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 157
++ W P + S S D+ + WD ++GQ ATL H+N V V + NG +L
Sbjct: 248 VKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ--SLATLHAHKNTVMEVKLNLNGNWLL 305
Query: 158 TCSRDKSVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKE 215
T SRD ++++ ++E + V H ++ V +HP + + AS D ++ LF
Sbjct: 306 TASRDHLCKLFDIRNLKEELQ---VFRGHKKEATAVAWHPVHEGLFASGGSDGSL-LFWH 361
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
E + + + +H +WSLA+ +G L + S+D T K W +PG+
Sbjct: 362 VGVEKE-VGGMEM-AHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 410
Score = 160 (61.4 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 49/203 (24%), Positives = 82/203 (40%)
Query: 58 WNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF 117
W P+G + + LW G F + IL H +R WS ++ +A
Sbjct: 128 WTPEGRRLVTGASSGEFTLWN----GLTFNFETILQ-AHDSPVRAMTWSHNDMWMLTADH 182
Query: 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177
W + + H+ ++ ++S ATCS D +V +W+ E
Sbjct: 183 GGYVKYWQSNMNNVKM---FQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEER 239
Query: 178 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL-FKEDKAEADWINFATLKSHTSTVW 236
++ H DVK V +HP ++ S S D + F + K + ATL +H +TV
Sbjct: 240 ---ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQ---SLATLHAHKNTVM 293
Query: 237 SLAFDRIGSRLATCSDDATVKIW 259
+ + G+ L T S D K++
Sbjct: 294 EVKLNLNGNWLLTASRDHLCKLF 316
Score = 140 (54.3 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 45/202 (22%), Positives = 88/202 (43%)
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
W+P G + + + +W+ + FE L+ H++ V+++TWS N ++ T
Sbjct: 128 WTPEGRRLVTGASSGEFTLWNGLTFNFE--TILQAHDSPVRAMTWSHNDMWMLTADHGGY 185
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
V W+ + + AH + +++ F P DN A+ S D TV+++ + + I
Sbjct: 186 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERI- 240
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDAT--VKIWKEYKPGNSAGIPTPDNDSVWKCV 282
L+ H + V + + + + S D+ +K W + K G S ++V +
Sbjct: 241 ---LRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-DPKTGQSLATLHAHKNTVMEVK 296
Query: 283 CTLSGHHGRTIYDISWCHLTDL 304
L+G+ T C L D+
Sbjct: 297 LNLNGNWLLTASRDHLCKLFDI 318
Score = 85 (35.0 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
R H ++ VAW+PV G+ AS DG + W + +E
Sbjct: 329 RGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVE 365
Score = 43 (20.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS--DMVSFDLVH--TEHRAHNQ 343
H G I+ ++W L ++ + D + + N GD D + +L+ +E
Sbjct: 375 HEGM-IWSLAWHPLGHILCSGSNDHTSKFWTRN-RPGDKMRDRYNLNLLPGMSEDGVEYD 432
Query: 344 DV--NCVAWNPVVPGM 357
D+ N +A V+PGM
Sbjct: 433 DLEPNSLA---VIPGM 445
>UNIPROTKB|A7YY75 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9913 "Bos taurus"
[GO:0000776 "kinetochore" evidence=ISS] [GO:0007080 "mitotic
metaphase plate congression" evidence=ISS] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISS] [GO:0031080 "nuclear pore
outer ring" evidence=ISS] [GO:0006999 "nuclear pore organization"
evidence=ISS] [GO:0000777 "condensed chromosome kinetochore"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051028
"mRNA transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299 EMBL:BC151606
IPI:IPI00839665 RefSeq:NP_001096559.1 UniGene:Bt.103393
ProteinModelPortal:A7YY75 STRING:A7YY75 Ensembl:ENSBTAT00000049050
GeneID:506509 KEGG:bta:506509 eggNOG:NOG257251
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
NextBio:20867635 ArrayExpress:A7YY75 Uniprot:A7YY75
Length = 360
Score = 181 (68.8 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 46/142 (32%), Positives = 75/142 (52%)
Query: 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190
F + H++ + V++ +G+ +ATCS D+SV VW+ E E+ C A H V
Sbjct: 2 FVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKTHSGSVW 61
Query: 191 KVRF-HP-FDNILASASYDDTVKLFKE------DK--AEADWINFATLKSHTSTVWSLAF 240
+V + HP F +LAS S+D T +++E DK ++ W+ TL ++V + F
Sbjct: 62 RVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKF 121
Query: 241 --DRIGSRLATCSDDATVKIWK 260
+G LATCS D V+I++
Sbjct: 122 APKHMGLMLATCSADGIVRIYE 143
Score = 142 (55.0 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 54/189 (28%), Positives = 91/189 (48%)
Query: 186 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-DWINFATLKSHTSTVWSL--AFDR 242
I DV FH +A+ S D +VK++ DK+E+ +W A+ K+H+ +VW + A
Sbjct: 15 IHDVS-FDFH--GRRMATCSSDQSVKVW--DKSESGEWHCTASWKTHSGSVWRVTWAHPE 69
Query: 243 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC--H 300
G LA+CS D T +W+E ++ + S W TL ++ D+ + H
Sbjct: 70 FGQVLASCSFDRTAAVWEEIVGESNDKLR---GQSHWVKRTTLVDSR-TSVTDVKFAPKH 125
Query: 301 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV-----VP 355
+ ++AT D +RI+ E P+ ++ + L H + +C++WNP P
Sbjct: 126 MGLMLATCSADGIVRIY-EAPDV--MNLSQWSLQH--EISCKLSCSCISWNPSSSRAHAP 180
Query: 356 GMLASCSDD 364
M+A SDD
Sbjct: 181 -MIAVGSDD 188
Score = 130 (50.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 42/137 (30%), Positives = 66/137 (48%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + +VS++ G +++C D+++++W K G + + H ++ W+ P
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKT--HSGSVWRVTWAHP 68
Query: 108 -CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK---------SVTWSK-----N 152
G +AS SFD T AVW++ G E N L G + VK SVT K
Sbjct: 69 EFGQVLASCSFDRTAAVWEEIVG--ESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHM 126
Query: 153 GQFLATCSRDKSVWVWE 169
G LATCS D V ++E
Sbjct: 127 GLMLATCSADGIVRIYE 143
Score = 123 (48.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 40/148 (27%), Positives = 68/148 (45%)
Query: 231 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290
H + ++FD G R+ATCS D +VK+W + + G W C + H G
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGE------------WHCTASWKTHSG 58
Query: 291 RTIYDISWCH--LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD---- 344
+++ ++W H ++A+ D +++E G+S+ H R D
Sbjct: 59 -SVWRVTWAHPEFGQVLASCSFDRTAAVWEEI--VGESNDKLRGQSHWVKRTTLVDSRTS 115
Query: 345 VNCVAWNPVVPG-MLASCSDDGDVKLWQ 371
V V + P G MLA+CS DG V++++
Sbjct: 116 VTDVKFAPKHMGLMLATCSADGIVRIYE 143
Score = 77 (32.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285
A +H S VW ++++ G+ LA+ DD V++WK N DN WKC L
Sbjct: 272 AQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWK----ANYM-----DN---WKCTGIL 319
Query: 286 SGH 288
G+
Sbjct: 320 KGN 322
Score = 75 (31.5 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 304 LIATACGDDAIRIFKENP---EAGDSD-MVSFDL-VHTEHRAHNQDVNCVAWNPVVPGML 358
++A A D +RIF P E S F++ + + HN V V+WN + +L
Sbjct: 237 ILAIATKD--VRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWN-ITGTVL 293
Query: 359 ASCSDDGDVKLWQ 371
AS DDG V+LW+
Sbjct: 294 ASSGDDGCVRLWK 306
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 185 (70.2 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 53/182 (29%), Positives = 85/182 (46%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++ H V++ ++ G I+SCG DK ++++ E+ KA H+ + A+
Sbjct: 613 VRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKA-----HEDEVLCCAF 667
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ--FLATCSRDK 163
S FIA+ S D +W+ +G E + H +V ++ N LAT S D
Sbjct: 668 SADDKFIATCSVDKKVKIWNSMTG--ELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDY 725
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA-EADW 222
+ +W++ +E EC + H V RF P D +LAS S D T+KL+ A E
Sbjct: 726 FLKLWDLNQE---ECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKS 782
Query: 223 IN 224
IN
Sbjct: 783 IN 784
Score = 166 (63.5 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 53/173 (30%), Positives = 81/173 (46%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
H + +S G IAS D T V+ +G E ++ HE+EV +S + +F
Sbjct: 616 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETG--EKLLEIKAHEDEVLCCAFSADDKF 673
Query: 156 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN--ILASASYDDTVKLF 213
+ATCS DK V +W E + + H + V F N +LA+ S D +KL+
Sbjct: 674 IATCSVDKKVKIWN---SMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLW 730
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
++ E N T+ HT++V F LA+CS D T+K+W + K N
Sbjct: 731 DLNQEECR--N--TMFGHTNSVSHCRFSPDDQVLASCSADGTLKLW-DVKSAN 778
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 69/304 (22%), Positives = 129/304 (42%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG---------QFECNATLEGHENEV- 144
GH ++ +SP +AS S D T +WD +S QF N+ + EV
Sbjct: 743 GHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDLEVI 802
Query: 145 -KSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203
K +WS +G + +++K V+++++ A + H V+ F P +++
Sbjct: 803 VKCCSWSADGAKIMVAAKNK-VFLFDIHSSGLL--AEMHMGHHSAVQYCDFSPHNHLAVV 859
Query: 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
A V+L+ D + A + H S V + F GS T SDD T+++W+ K
Sbjct: 860 ALSQYCVELWSMDSG----LKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKK 915
Query: 264 P-GNSAGIPTPDNDSVWKC--VCTLSGHHGRTIYDISWC-----HLTDL-IATACGDDAI 314
NSA + + D V++ V L+ + R + I+ +LT+ ++ C +
Sbjct: 916 VCKNSATVLKQEIDVVFQENEVTVLAVDNIRRLQLINGNTGQIDYLTEAQVSCCCLSPHL 975
Query: 315 RIFKENPEAGDSDMVSF--DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
+ E G ++ + + H V + + +++S SDD V++W
Sbjct: 976 QYLAFGGEDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLISS-SDDSAVQIWNW 1034
Query: 373 KLEN 376
+ E+
Sbjct: 1035 QSED 1038
Score = 90 (36.7 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 39/181 (21%), Positives = 73/181 (40%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK--FTAKAIL--SDGHQRT- 99
T+ GH V + ++P +++SC D ++LW +S + K S+ Q
Sbjct: 740 TMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDL 799
Query: 100 ---IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
++ +WS G I A+ + ++D S + GH + V+ +S +
Sbjct: 800 EVIVKCCSWSADGAKIMVAAKNKVF-LFDIHSSGLLAEMHM-GHHSAVQYCDFSPHNHLA 857
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
V +W + D A H+ V V F P + ++S D T++L++
Sbjct: 858 VVALSQYCVELWSM---DSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETK 914
Query: 217 K 217
K
Sbjct: 915 K 915
Score = 88 (36.0 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 39/163 (23%), Positives = 69/163 (42%)
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN---SAGIPTPDNDSVWKC 281
F + H +TV + F G L + SDD+ V+IW A T + + K
Sbjct: 998 FQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWNWQSEDPFFLQAHQETVKDFRLLKN 1057
Query: 282 VCTLSGHHGRTI--YDISW--------CHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 331
LS T+ ++I CH +++ DA + F + + SF
Sbjct: 1058 SRLLSWSFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISSDATK-FSSTSADKTAKIWSF 1116
Query: 332 DLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
+L+ H R H V C +++ V +LA+ D+G++++W +
Sbjct: 1117 ELLSPLHELRGHKGCVRCSSFS-VNNTLLATGDDNGEIRIWNV 1158
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 221 (82.9 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 70/263 (26%), Positives = 114/263 (43%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q L GH V + +G + +SC +D++IR+W G A GH ++
Sbjct: 370 QILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQ--VACVAQGSGHTHSVGTI 427
Query: 104 AWSPCG-NFIASASFDATTAVWD-------KR----SGQ--FECNATLEGHENEVKSVTW 149
S +F+ + S D T +W K SG + T H+ ++ S+
Sbjct: 428 CCSRLKESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCHDKDINSLAV 487
Query: 150 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209
S N + LAT S+D++ +W + + + V H + + V+F P D +LA+AS D T
Sbjct: 488 SPNDKLLATGSQDRTAKLWAL---PQCQLLGVFTGHRRGLWNVQFSPTDQVLATASADGT 544
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 269
+KL+ A D+ T + H ++V +AF GS+L + D +K+W K
Sbjct: 545 IKLW----ALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWT-IKSNECVR 599
Query: 270 IPTPDNDSVWKCVCTLSGHHGRT 292
D VW C+ H T
Sbjct: 600 TLDAHEDKVWGLHCSQLDDHAIT 622
Score = 178 (67.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 91/347 (26%), Positives = 143/347 (41%)
Query: 46 LKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
L H V ++S++ G TM+SS G DK +W +S+ T S + E
Sbjct: 191 LTAHYSAVTSLSFSEGGHTMLSS-GRDKICIVWDLQSYQTTRTVPVFESVEASVLLPEQP 249
Query: 105 WSPCGNFIASASFDATTA-------VWDKRSGQFECNAT---LEGHENEVKSVTWSKNGQ 154
G + S+ TA VW+ SGQ C T + G E+ T ++
Sbjct: 250 APALG--VKSSGLHFLTAGDQGILRVWEAASGQ--CVYTQPQMPGLRQELTHCTLARAAD 305
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF-HPFDNILASASYDDTVKLF 213
L T + D ++ ++E + + ++V VRF P D+ + AS +K+F
Sbjct: 306 LLLTVTADHNLLLYEA---HSLQLQKQFAGYSEEVLDVRFLGPSDSHIVVASNSPCLKVF 362
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTP 273
E + L HT V +L R G A+C+ D +++IWK K G A
Sbjct: 363 -----ELQTLACQILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQVA----- 412
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEA-------GD 325
CV SGH ++ I L + + T D ++++ PEA D
Sbjct: 413 -------CVAQGSGHT-HSVGTICCSRLKESFLVTGSQDCTVKLWPL-PEALLAKSTAAD 463
Query: 326 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
S V T R H++D+N +A +P +LA+ S D KLW +
Sbjct: 464 SGPVLLQ-AQTTRRCHDKDINSLAVSPN-DKLLATGSQDRTAKLWAL 508
Score = 157 (60.3 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 45/173 (26%), Positives = 70/173 (40%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
H + I A SP +A+ S D T +W Q + GH + +V +S Q
Sbjct: 478 HDKDINSLAVSPNDKLLATGSQDRTAKLW--ALPQCQLLGVFTGHRRGLWNVQFSPTDQV 535
Query: 156 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 215
LAT S D ++ +W + ++ C H V KV F + L S+ D +KL+
Sbjct: 536 LATASADGTIKLWAL---QDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTI 592
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268
E TL +H VW L ++ T D+ + +WK+ A
Sbjct: 593 KSNEC----VRTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILWKDVTEAEQA 641
Score = 147 (56.8 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 41/171 (23%), Positives = 81/171 (47%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
+C+++ T GH+ +WNV ++P ++++ D I+LW + F K +GH
Sbjct: 510 QCQLLGVFT--GHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFS---CLKTF--EGH 562
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
++ + A+ G+ + S+ D +W +S EC TL+ HE++V + S+
Sbjct: 563 DASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSN--ECVRTLDAHEDKVWGLHCSQLDDHA 620
Query: 157 ATCSRDKSVWVW-EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 206
T D + +W +V E ++ E A ++ + ++ DN+L Y
Sbjct: 621 ITGGSDSRIILWKDVTEAEQAEEQAK-----REEQVIKQQELDNLLHEKRY 666
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 69/293 (23%), Positives = 123/293 (41%)
Query: 95 GHQRTIRETAW-SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 153
G+ + + + P + I AS V++ ++ C L GH + V ++ + G
Sbjct: 332 GYSEEVLDVRFLGPSDSHIVVASNSPCLKVFELQT--LACQI-LHGHTDIVLALDVFRKG 388
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKL 212
A+C++D+S+ +W++ + + C A + H V + ++ L + S D TVKL
Sbjct: 389 WLFASCAKDQSIRIWKMNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKL 448
Query: 213 F--------KEDKAEADWINF---ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261
+ K A++ + T + H + SLA LAT S D T K+W
Sbjct: 449 WPLPEALLAKSTAADSGPVLLQAQTTRRCHDKDINSLAVSPNDKLLATGSQDRTAKLW-- 506
Query: 262 YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321
+P + + +GH R ++++ + ++ATA D I+++
Sbjct: 507 -------ALPQ------CQLLGVFTGHR-RGLWNVQFSPTDQVLATASADGTIKLWA--- 549
Query: 322 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIK 373
+ F + T H+ V VA+ V G L S DG +KLW IK
Sbjct: 550 ------LQDFSCLKT-FEGHDASVLKVAF--VSRGSQLLSSGSDGLLKLWTIK 593
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 216 (81.1 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 61/212 (28%), Positives = 105/212 (49%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTA-KAILSDGHQRTIRETAWS 106
GH+ V +V ++P G +++S D+ +RLW + G KF+ KA H +R +S
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRG-KFSEFKA-----HTAPVRSVDFS 69
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
G F+A+AS D + VW +F + L H + V+ +S +G+ + +CS DK++
Sbjct: 70 ADGQFLATASEDKSIKVWSMYRQRFLYS--LYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 127
Query: 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA 226
+W+ + +C + + V F+P +ASA D TVK++ D +
Sbjct: 128 IWDTTNK---QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW--DVRVNKLLQHY 182
Query: 227 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
+ H+ V ++F G+ L T S D T+KI
Sbjct: 183 QV--HSGGVNCISFHPSGNYLITASSDGTLKI 212
Score = 209 (78.6 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 58/175 (33%), Positives = 89/175 (50%)
Query: 88 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW--DKRSGQFECNATLEGHENEVK 145
A+A GH+ + +SP GN +ASAS D T +W DKR G+F + + H V+
Sbjct: 9 ARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKR-GKF---SEFKAHTAPVR 64
Query: 146 SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205
SV +S +GQFLAT S DKS+ VW + + + H V+ +F P ++ S S
Sbjct: 65 SVDFSADGQFLATASEDKSIKVWSMYRQ---RFLYSLYRHTHWVRCAKFSPDGRLIVSCS 121
Query: 206 YDDTVKLFKEDKAEADWIN-FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D T+K++ D +N F+ + V F+ G+ +A+ D TVK+W
Sbjct: 122 EDKTIKIW--DTTNKQCVNNFSDSVGFANFV---DFNPSGTCIASAGSDQTVKVW 171
Score = 207 (77.9 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 60/214 (28%), Positives = 97/214 (45%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
K H V +V ++ G +++ EDK+I++W + +F H +R +S
Sbjct: 57 KAHTAPVRSVDFSADGQFLATASEDKSIKVWSM--YRQRFLYSLYR---HTHWVRCAKFS 111
Query: 107 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166
P G I S S D T +WD + Q C V ++ +G +A+ D++V
Sbjct: 112 PDGRLIVSCSEDKTIKIWDTTNKQ--CVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVK 169
Query: 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA 226
VW+V + V H V + FHP N L +AS D T+K+ D E I
Sbjct: 170 VWDVRVNKLLQHYQV---HSGGVNCISFHPSGNYLITASSDGTLKIL--DLLEGRLIY-- 222
Query: 227 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
TL+ HT V++++F + G A+ D V +W+
Sbjct: 223 TLQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 256
Score = 157 (60.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 56 VSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA 115
V +NP GT I+S G D+ +++W NK + G I ++ P GN++ +A
Sbjct: 150 VDFNPSGTCIASAGSDQTVKVWDVRV--NKLLQHYQVHSGGVNCI---SFHPSGNYLITA 204
Query: 116 SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175
S D T + D G+ TL+GH V +V++SK G+ A+ D V +W DE
Sbjct: 205 SSDGTLKILDLLEGRLIY--TLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNF-DE 261
Query: 176 YECAAVINAHIQDVKKVRF 194
C + +++K++ F
Sbjct: 262 LHCKGLTK---RNLKRLHF 277
Score = 147 (56.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 61/205 (29%), Positives = 95/205 (46%)
Query: 185 HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 244
H V V+F P N+LASAS D TV+L+ DK F+ K+HT+ V S+ F G
Sbjct: 17 HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRG----KFSEFKAHTAPVRSVDFSADG 72
Query: 245 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS---WCHL 301
LAT S+D ++K+W Y+ + + + W C GR I S +
Sbjct: 73 QFLATASEDKSIKVWSMYR---QRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKI 128
Query: 302 TDLIATACGD---DAIRI--FKE-NPE------AGDSDMVS-FDL-VHT--EH-RAHNQD 344
D C + D++ F + NP AG V +D+ V+ +H + H+
Sbjct: 129 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 188
Query: 345 VNCVAWNPVVPGMLASCSDDGDVKL 369
VNC++++P L + S DG +K+
Sbjct: 189 VNCISFHPS-GNYLITASSDGTLKI 212
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 46/172 (26%), Positives = 74/172 (43%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG--KESFGNKFTAKAILSDGHQRTIRE 102
+L H V ++P G +I SC EDK I++W + N F+ S G +
Sbjct: 97 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD----SVGFANFVD- 151
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
++P G IASA D T VWD R + + + H V +++ +G +L T S D
Sbjct: 152 --FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV--HSGGVNCISFHPSGNYLITASSD 207
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
++ + ++ E + H V V F + AS D V L++
Sbjct: 208 GTLKILDLLEG---RLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 256
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 214 (80.4 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 46/165 (27%), Positives = 83/165 (50%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH++++ + SP +IA++S D T +W + + EC TL GH + V W+ +
Sbjct: 52 GHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLEC--TLFGHYRGISQVKWATGSK 109
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
+LA+ S DK++ +W+ + C + H V + F+P +L S S+D+TV+++
Sbjct: 110 YLASASDDKTIRIWDFEKRCSVRC---LKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWN 166
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
D L +H+ + S++ G+ AT S D +IW
Sbjct: 167 LQ----DGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIW 207
Score = 188 (71.2 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 49/170 (28%), Positives = 83/170 (48%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH+ V VS +P I++ D I++W +F + T GH R I +
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLF-----GHYRGISQVK 103
Query: 105 WSPCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
W+ ++ASAS D T +WD ++ C L+GH N V S+ ++ G L + S D+
Sbjct: 104 WATGSKYLASASDDKTIRIWDFEKRCSVRC---LKGHTNYVSSIDFNPLGTLLVSGSWDE 160
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
+V +W + + C ++ AH + + V + A+ASYD +++
Sbjct: 161 TVRIWNL---QDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIW 207
Score = 162 (62.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 48/203 (23%), Positives = 88/203 (43%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL GH + V W ++S +DK IR+W F + + + + GH +
Sbjct: 91 TLFGHYRGISQVKWATGSKYLASASDDKTIRIW---DFEKRCSVRCL--KGHTNYVSSID 145
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
++P G + S S+D T +W+ + G C L H + SV+ S +G AT S D
Sbjct: 146 FNPLGTLLVSGSWDETVRIWNLQDGT--CLRMLPAHSEPIISVSISADGTLCATASYDGM 203
Query: 165 VWVWEVGEEDEYECAAVINAHIQ-DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
+W+V +C + I + ++F L ++ + ++L+ + I
Sbjct: 204 ARIWDVLSG---QCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRI 260
Query: 224 NFATLKSHTSTVWSLAFDRIGSR 246
SH +T +S+++D S+
Sbjct: 261 ----FDSHVNTRYSMSWDCYSSK 279
Score = 161 (61.7 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 44/136 (32%), Positives = 72/136 (52%)
Query: 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN 183
++ SG F TL GHE V V+ S N +++AT S D ++ +W EC +
Sbjct: 38 YESHSG-FSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSA-LTFRLECT--LF 93
Query: 184 AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 243
H + + +V++ LASAS D T++++ +K + LK HT+ V S+ F+ +
Sbjct: 94 GHYRGISQVKWATGSKYLASASDDKTIRIWDFEKR----CSVRCLKGHTNYVSSIDFNPL 149
Query: 244 GSRLATCSDDATVKIW 259
G+ L + S D TV+IW
Sbjct: 150 GTLLVSGSWDETVRIW 165
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/134 (28%), Positives = 67/134 (50%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
RC + + LKGH V ++ +NP GT++ S D+ +R+W + G T +L H
Sbjct: 128 RCSV---RCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQD-G---TCLRMLP-AH 179
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN-EVKSVTWSKNGQF 155
I + S G A+AS+D +WD SGQ C TL N + ++ +++N ++
Sbjct: 180 SEPIISVSISADGTLCATASYDGMARIWDVLSGQ--CLKTLVEPINVPLSNLQFTENRKY 237
Query: 156 LATCSRDKSVWVWE 169
L + + + +W+
Sbjct: 238 LLVSNLNSQIRLWD 251
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 215 (80.7 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 63/211 (29%), Positives = 100/211 (47%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GH+ V V+++P G +++S DK +R+W G +A H T+R +
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRA-----HTATVRSVHFCS 113
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G +AS D T VW +F + L H N V+ +S +G+ + + S DK+V +
Sbjct: 114 DGQSFVTASDDKTVKVWATHRQKFLFS--LSQHINWVRCAKFSPDGRLIVSASDDKTVKL 171
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 227
W+ + EC H V V FHP +A+A D+TVK++ D +
Sbjct: 172 WD---KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW--DVRTHRLLQHYQ 226
Query: 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258
L H++ V L+F G+ L T S D+T+KI
Sbjct: 227 L--HSAAVNGLSFHPSGNYLITASSDSTLKI 255
Score = 209 (78.6 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 65/218 (29%), Positives = 92/218 (42%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S + H V +V + G + +DK +++W KF LS H +R
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHR--QKFLFS--LSQ-HINWVRC 150
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G I SAS D T +WDK S EC + H V V + +G +A D
Sbjct: 151 AKFSPDGRLIVSASDDKTVKLWDKSSR--ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMD 208
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+V VW+V + H V + FHP N L +AS D T+K+ D E
Sbjct: 209 NTVKVWDVRT---HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKIL--DLMEGRL 263
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
+ TL H ++AF R G A+ D V +WK
Sbjct: 264 LY--TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 194 (73.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 60/214 (28%), Positives = 99/214 (46%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH+ V V ++ ++S D + +W K ++A GH+ + +S
Sbjct: 16 KGHRDAVTCVDFSINTKQLASGSMDSCLMVWHM-----KPQSRAYRFTGHKDAVTCVNFS 70
Query: 107 PCGNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
P G+ +AS S D T +W G+ + H V+SV + +GQ T S DK+V
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGE---STVFRAHTATVRSVHFCSDGQSFVTASDDKTV 127
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225
VW + + ++ HI V+ +F P ++ SAS D TVKL+ DK+ + ++
Sbjct: 128 KVWATHRQ---KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW--DKSSRECVH- 181
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ H V + F G+ +A D TVK+W
Sbjct: 182 -SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 154 (59.3 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 42/127 (33%), Positives = 64/127 (50%)
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
+GH + V V +S N + LA+ S D + VW + + A H V V F P
Sbjct: 16 KGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSR---AYRFTGHKDAVTCVNFSPS 72
Query: 198 DNILASASYDDTVKLFKED-KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256
++LAS S D TV+++ + K E+ ++HT+TV S+ F G T SDD TV
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGES-----TVFRAHTATVRSVHFCSDGQSFVTASDDKTV 127
Query: 257 KIWKEYK 263
K+W ++
Sbjct: 128 KVWATHR 134
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 179 (68.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 52/182 (28%), Positives = 86/182 (47%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++ H V++ ++ G I+SCG DK ++++ E+ KA H+ + A+
Sbjct: 611 VRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKA-----HEDEVLCCAF 665
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ--FLATCSRDK 163
S FIA+ S D +W+ +G E + + H +V ++ N LAT S D
Sbjct: 666 SADDRFIATCSVDKKVKIWNSVTG--ELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDY 723
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA-EADW 222
+ +W++ ++ EC + H V RF P D +LAS S D T+KL+ A E
Sbjct: 724 FLKLWDLNQK---ECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKS 780
Query: 223 IN 224
IN
Sbjct: 781 IN 782
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 60/254 (23%), Positives = 104/254 (40%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
E++ S Q + + N ++++ D ++LW K + GH
Sbjct: 690 ELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLW---DLNQKECRNTMF--GHTN 744
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSG---------QFECNA--TLEGHENEVKSV 147
++ +SP +AS S D T +WD +S QF N+ + E E VK
Sbjct: 745 SVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQEDMEVMVKCC 804
Query: 148 TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207
+WS +G L +++K V ++ + A + H ++ F P +++ A
Sbjct: 805 SWSADGASLVVAAKNK-VLLFNIHTGGLL--AEIHTGHHSTIQYCDFSPSNHLAVVALSQ 861
Query: 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP-GN 266
V+L+ D + A + H S V F GS T SDD T+++W+ K N
Sbjct: 862 YCVELWNMDSC----LKVADCRGHLSWVHCAMFSPDGSSFLTSSDDETIRLWETKKVCKN 917
Query: 267 SAGIPTPDNDSVWK 280
SA + D V++
Sbjct: 918 SAIVLNKKIDVVFQ 931
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 46/167 (27%), Positives = 72/167 (43%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
H+ T+R ++ G + S+S D+ VW+ +S E +L+ H+ VK KN +
Sbjct: 1002 HKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQS---EETVSLQAHQETVKDFRLLKNSRL 1058
Query: 156 LATCSRDKSVWVWEV--GE-EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 212
L+ S D +V VW + G E ++ C H V P +S S D T K+
Sbjct: 1059 LSW-SFDGTVKVWNIITGRIEKDFVC------HQDTVLSCDISPDATKFSSTSADKTAKI 1111
Query: 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ D L+ H V AF + LAT D+ ++IW
Sbjct: 1112 WSFDLLSP----LHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIW 1154
Score = 94 (38.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 39/163 (23%), Positives = 70/163 (42%)
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK---EYKPGNSAGIPTPDNDSVWKC 281
F + H +TV + F G + + SDD+ +++W E A T + + K
Sbjct: 996 FQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETVSLQAHQETVKDFRLLKN 1055
Query: 282 VCTLSGHHGRTI--YDISW--------CHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 331
LS T+ ++I CH +++ DA + F + + SF
Sbjct: 1056 SRLLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATK-FSSTSADKTAKIWSF 1114
Query: 332 DLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
DL+ H R H V C A++ V +LA+ D+G++++W +
Sbjct: 1115 DLLSPLHELRGHKGCVRCSAFS-VDSTLLATGDDNGEIRIWNV 1156
Score = 59 (25.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
R H V+C ++P L S SDD ++LW+ K
Sbjct: 879 RGHLSWVHCAMFSPDGSSFLTS-SDDETIRLWETK 912
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 218 (81.8 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 61/216 (28%), Positives = 101/216 (46%)
Query: 46 LKGHQG-RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
+ GH RV V+++P G +++ D + RLW E + + +GH + + +
Sbjct: 348 ITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQ-----KTEVLHQEGHAKPVHCLS 402
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+ G+ + + DA VWD R+G+ C LEGH V V +S NG +AT S+D +
Sbjct: 403 YHSDGSVLVTGGLDAFGRVWDLRTGR--CIMFLEGHLGAVFGVDFSPNGFHIATGSQDNT 460
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWI 223
+W++ I AH + V++ + L + SYD T K++ +K W
Sbjct: 461 CKIWDLRRRQP---VYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWS-NKT---WQ 513
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
TL+ H + V S+ +AT S D T K+W
Sbjct: 514 PLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 215 (80.7 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 67/238 (28%), Positives = 114/238 (47%)
Query: 38 CEMINSQTLKGHQGRVWNVSWNP-----QGTMIS--SCGEDKNIRLWGKESFGNKFTAKA 90
CE+ QTL+GH V V+ P + +++ S G D ++LWG F N+ +
Sbjct: 293 CEL--KQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWG---FNNEESIAD 347
Query: 91 ILSDGHQ-RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 149
I GH + + A+ P G F+A+A +D++ +WD + EGH V +++
Sbjct: 348 IT--GHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQ--EGHAKPVHCLSY 403
Query: 150 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209
+G L T D VW++ C + H+ V V F P +A+ S D+T
Sbjct: 404 HSDGSVLVTGGLDAFGRVWDLRTG---RCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNT 460
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGSRLATCSDDATVKIW--KEYKP 264
K++ + + + T+ +HT+ + + + + GS L TCS D+T KIW K ++P
Sbjct: 461 CKIWDLRRRQPVY----TIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQP 514
Score = 181 (68.8 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 42/133 (31%), Positives = 71/133 (53%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
RC M L+GH G V+ V ++P G I++ +D ++W +T A H
Sbjct: 428 RCIMF----LEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPA-----H 478
Query: 97 QRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
I + + CG+F+ + S+D+TT +W ++ Q TL+GH+N+V SV + N Q+
Sbjct: 479 TNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQ--PLKTLQGHDNKVISVDIAPNSQY 536
Query: 156 LATCSRDKSVWVW 168
+AT S D++ +W
Sbjct: 537 IATTSFDRTFKLW 549
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 48/172 (27%), Positives = 77/172 (44%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRETAW 105
+GH V +S++ G+++ + G D R+W T + I+ +GH + +
Sbjct: 392 EGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLR------TGRCIMFLEGHLGAVFGVDF 445
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKS 164
SP G IA+ S D T +WD R Q T+ H N + V + + G FL TCS D +
Sbjct: 446 SPNGFHIATGSQDNTCKIWDLRRRQPVY--TIPAHTNLISDVKYQQECGSFLVTCSYDST 503
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
+W ++ + H V V P +A+ S+D T KL+ D
Sbjct: 504 TKIWS---NKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWSPD 552
Score = 126 (49.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 56/219 (25%), Positives = 88/219 (40%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW----- 149
G R + A+S + + ++S+ +W E TL GH + V V
Sbjct: 259 GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPD--CELKQTLRGHASYVGGVALRPGVK 316
Query: 150 --SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD-VKKVRFHPFDNILASASY 206
+N +A+ D +V +W E E A I H+ V KV FHP LA+A Y
Sbjct: 317 ADEENVVAMASGGHDGAVKLWGFNNE---ESIADITGHMPHRVSKVAFHPSGRFLATACY 373
Query: 207 DDTVKLFK-EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265
D + +L+ E K E + H V L++ GS L T DA ++W + + G
Sbjct: 374 DSSWRLWDLEQKTEV-----LHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVW-DLRTG 427
Query: 266 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 304
+V+ + +G H T + C + DL
Sbjct: 428 RCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDL 466
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 220 (82.5 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 81/294 (27%), Positives = 131/294 (44%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q L GH + + +G M SC +DK+IR+W G L GH +
Sbjct: 380 QILYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGL--GHAHGVGAV 437
Query: 104 AWSPCG-NFIASASFDATTAVWD-------KR-----SGQFECNA--TLEGHENEVKSVT 148
+ S +F+ ++S D T VW+ K SG +A T GH+ ++ SV
Sbjct: 438 SCSRLKESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVA 497
Query: 149 WSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208
S N + +AT S+D+ +W + V H + + V+F P D ILA++S D
Sbjct: 498 VSPNDKLIATGSQDRLAKLWSC---PDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADG 554
Query: 209 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268
T+KL+ D+ T + H ++V + F G++L + D +K+W
Sbjct: 555 TLKLW----GLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWT-------- 602
Query: 269 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322
I T N+ CV TL GH + I+ + D++ TA D +I ++K+ E
Sbjct: 603 -IKT--NE----CVKTLDGHEDK-IWGLHTNKQDDMVVTASSDSSITLWKDVTE 648
Score = 159 (61.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 35 CSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
C C ++ T GH+ +W V ++P ++++ D ++LWG + F K +
Sbjct: 519 CPDCSLLGVFT--GHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFS---CLKTF--E 571
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH ++ + + G + S D +W ++ EC TL+GHE+++ + +K
Sbjct: 572 GHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTN--ECVKTLDGHEDKIWGLHTNKQDD 629
Query: 155 FLATCSRDKSVWVW-EVGEEDEYECAA 180
+ T S D S+ +W +V E ++ E A
Sbjct: 630 MVVTASSDSSITLWKDVTEIEQEEAQA 656
Score = 115 (45.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 59/246 (23%), Positives = 104/246 (42%)
Query: 137 LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196
L GH + ++ + G +C++DKS+ VW + ++ C A H V V
Sbjct: 382 LYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSR 441
Query: 197 F-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255
++ + ++S D T+K++ ++ A L S T+ + +R + D +
Sbjct: 442 LKESFVVTSSQDCTIKVWNIPESLTSKAK-AALISGPETLHAQMTERGHDK-----DINS 495
Query: 256 VKIWKEYKPGNSAGIPTPDND---SVWKCV-CTLSG---HHGRTIYDISWCHLTDLIATA 308
V + P N I T D +W C C+L G H R I+ + + + ++AT+
Sbjct: 496 VAV----SP-NDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATS 550
Query: 309 CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDV 367
D ++++ G D F + T H+ V + + V G L S DG +
Sbjct: 551 SADGTLKLW------GLQD---FSCLKT-FEGHDASVLKIIF--VSRGTQLLSGGSDGLL 598
Query: 368 KLWQIK 373
KLW IK
Sbjct: 599 KLWTIK 604
Score = 97 (39.2 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 37/156 (23%), Positives = 69/156 (44%)
Query: 22 PSTENL-TGTNLILCSRCEMINSQ---TLKG-HQGRVWNVSWNPQGTMISSCGEDKNIRL 76
P E L TG+ +L + ++ T K H V + ++ T++++ G D I++
Sbjct: 77 PDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKI 136
Query: 77 WGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA--SASFDATTAVWDKRSGQFECN 134
W ++ + G + + P + + S+S D +WD S + C
Sbjct: 137 W---DMIKQYCTHNL--KGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSK--CV 189
Query: 135 ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 170
A L+GH + V S+ ++ +G L + RDK VW +
Sbjct: 190 AVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNL 225
>UNIPROTKB|E1BYP7 [details] [associations]
symbol:SEH1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0006999
"nuclear pore organization" evidence=IEA] [GO:0007080 "mitotic
metaphase plate congression" evidence=IEA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051315
GO:GO:0007080 GO:GO:0006999 CTD:81929 KO:K14299
GeneTree:ENSGT00550000074999 OMA:YEAPDIM EMBL:AADN02058864
IPI:IPI00575685 RefSeq:XP_003640847.1 Ensembl:ENSGALT00000022497
GeneID:100859886 KEGG:gga:100859886 Uniprot:E1BYP7
Length = 419
Score = 178 (67.7 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 45/142 (31%), Positives = 74/142 (52%)
Query: 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190
F + H + + V++ +G+ +ATCS D+SV VW+ E ++ C A H V
Sbjct: 2 FVARSIAADHRDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGDWHCTASWKTHSGSVW 61
Query: 191 KVRF-HP-FDNILASASYDDTVKLFKE------DK--AEADWINFATLKSHTSTVWSLAF 240
+V + HP F +LAS S+D T +++E DK ++ W+ TL ++V + F
Sbjct: 62 RVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKF 121
Query: 241 --DRIGSRLATCSDDATVKIWK 260
+G LATCS D V+I++
Sbjct: 122 APKHMGLMLATCSADGVVRIYE 143
Score = 146 (56.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 54/188 (28%), Positives = 89/188 (47%)
Query: 186 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE-ADWINFATLKSHTSTVWSL--AFDR 242
I DV FH +A+ S D +VK++ DK+E DW A+ K+H+ +VW + A
Sbjct: 15 IHDVS-FDFH--GRRMATCSSDQSVKVW--DKSENGDWHCTASWKTHSGSVWRVTWAHPE 69
Query: 243 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC--H 300
G LA+CS D T +W+E ++ + S W TL ++ D+ + H
Sbjct: 70 FGQVLASCSFDRTAAVWEEIVGESNDKLR---GQSHWVKRTTLVDSR-TSVTDVKFAPKH 125
Query: 301 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP----VVPG 356
+ ++AT D +RI+ E P+ ++ + L H + +C++WNP
Sbjct: 126 MGLMLATCSADGVVRIY-EAPDV--MNLSQWSLQH--EISCKLSCSCISWNPSSSRAHSP 180
Query: 357 MLASCSDD 364
M+A SDD
Sbjct: 181 MIAVGSDD 188
Score = 130 (50.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 42/137 (30%), Positives = 67/137 (48%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + +VS++ G +++C D+++++W K G+ + + H ++ W+ P
Sbjct: 11 HRDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGDWHCTASWKT--HSGSVWRVTWAHP 68
Query: 108 -CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK---------SVTWSK-----N 152
G +AS SFD T AVW++ G E N L G + VK SVT K
Sbjct: 69 EFGQVLASCSFDRTAAVWEEIVG--ESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHM 126
Query: 153 GQFLATCSRDKSVWVWE 169
G LATCS D V ++E
Sbjct: 127 GLMLATCSADGVVRIYE 143
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 231 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290
H + ++FD G R+ATCS D +VK+W + + G+ W C + H G
Sbjct: 11 HRDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGD------------WHCTASWKTHSG 58
Query: 291 RTIYDISWCH--LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD---- 344
+++ ++W H ++A+ D +++E G+S+ H R D
Sbjct: 59 -SVWRVTWAHPEFGQVLASCSFDRTAAVWEEI--VGESNDKLRGQSHWVKRTTLVDSRTS 115
Query: 345 VNCVAWNPVVPG-MLASCSDDGDVKLWQ 371
V V + P G MLA+CS DG V++++
Sbjct: 116 VTDVKFAPKHMGLMLATCSADGVVRIYE 143
Score = 80 (33.2 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 304 LIATACGDDAIRIFKENP---EAGDSD-MVSFDL-VHTEHRAHNQDVNCVAWNPVVPGML 358
++A A D +RIF P E S + F++ + + HN V V+WN + +L
Sbjct: 237 ILAVATKD--VRIFTLKPLRKELTSSGGLTKFEIHIVAQFDNHNSQVWRVSWN-ITGTVL 293
Query: 359 ASCSDDGDVKLWQ 371
AS DDG V+LW+
Sbjct: 294 ASSGDDGCVRLWK 306
Score = 78 (32.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 41/139 (29%), Positives = 60/139 (43%)
Query: 165 VWVWEVGEED-EYECAAVINAHIQDVKKVRFHP-----FDNILASASYDD---TVK-LFK 214
V ++E E +Y A + V + F P F +ILA A+ D T+K L K
Sbjct: 197 VQIYEYNENTRKYAKAEALMTVTDPVHDIAFAPNLGRSF-HILAVATKDVRIFTLKPLRK 255
Query: 215 EDKAEADWINF-----ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 269
E + F A +H S VW ++++ G+ LA+ DD V++WK N
Sbjct: 256 ELTSSGGLTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWK----ANYM- 310
Query: 270 IPTPDNDSVWKCVCTLSGH 288
DN WKC L G+
Sbjct: 311 ----DN---WKCTGILKGN 322
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 216 (81.1 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 63/218 (28%), Positives = 96/218 (44%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S K H V +V ++ G + + EDK+I++W + +F H +R
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM--YRQRFLYSLYR---HTHWVRC 149
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G I S S D T +WD S Q C V +S NG +A+ D
Sbjct: 150 AKFSPDGRLIVSCSEDKTIKIWDTTSKQ--CVNNFSDSVGFANFVDFSPNGTCIASAGSD 207
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+V +W++ + V H V + FHP N L +AS D TVK+ D E
Sbjct: 208 HAVRIWDIRMNRLLQHYQV---HSCGVNCLSFHPSGNSLVTASSDGTVKIL--DLVEGRL 262
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
I TL+ HT V++++F + G + DA V +W+
Sbjct: 263 IY--TLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWR 298
Score = 212 (79.7 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 61/215 (28%), Positives = 101/215 (46%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
KGH+ + + ++P I++ D + LW + A+A GH+ + +S
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPH-----ARAYRYVGHKDVVTSLQFS 69
Query: 107 PCGNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
P GN +ASAS D T +W R G+ ++ + H V+SV +S +GQFL T S DKS+
Sbjct: 70 PQGNLLASASRDKTVRLWVLDRKGK---SSEFKAHTAPVRSVDFSADGQFLVTASEDKSI 126
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN- 224
VW + + + H V+ +F P ++ S S D T+K++ D +N
Sbjct: 127 KVWSMYRQ---RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTSKQCVNN 181
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
F+ + V F G+ +A+ D V+IW
Sbjct: 182 FSDSVGFANFV---DFSPNGTCIASAGSDHAVRIW 213
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 66/252 (26%), Positives = 111/252 (44%)
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
+GH+ + S +S N + +AT S D + +W + + A H V ++F P
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLWSL---KPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257
N+LASAS D TV+L+ D+ + K+HT+ V S+ F G L T S+D ++K
Sbjct: 72 GNLLASASRDKTVRLWVLDRKGKS----SEFKAHTAPVRSVDFSADGQFLVTASEDKSIK 127
Query: 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS---WCHLTDLIATACGD--- 311
+W Y+ + + + W C GR I S + D + C +
Sbjct: 128 VWSMYR---QRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFS 183
Query: 312 DAIRI-----FKEN----PEAGDSDMVS-FDL----VHTEHRAHNQDVNCVAWNPVVPGM 357
D++ F N AG V +D+ + ++ H+ VNC++++P
Sbjct: 184 DSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPS-GNS 242
Query: 358 LASCSDDGDVKL 369
L + S DG VK+
Sbjct: 243 LVTASSDGTVKI 254
Score = 43 (20.2 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 358 LASCSDDGDVKLWQIKLENL 377
+AS D V++W I++ L
Sbjct: 201 IASAGSDHAVRIWDIRMNRL 220
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 212 (79.7 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 65/232 (28%), Positives = 115/232 (49%)
Query: 37 RCEMINS--QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
RC + + L GH+G V+ ++P G+ ++S G D+ I LW + + A L
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY---ATLK- 107
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG- 153
GH + E ++ G+ + SAS D T AVWD +G E L+GH + V S ++ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGP 165
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASYDDTVKL 212
Q + T S D +V +W++ ++ AAV + V V F+ + + S D+ +K+
Sbjct: 166 QLVCTGSDDGTVKLWDIRKK-----AAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
+ + + + T++ H +V L+ GS L + + D TV++W + +P
Sbjct: 221 WDLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW-DVRP 267
Score = 150 (57.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 45/162 (27%), Positives = 74/162 (45%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
+V V++N I S G D +I++W NK T GH ++ + S G++
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQ--NKLT---YTMRGHADSVTGLSLSSEGSY 250
Query: 112 IASASFDATTAVWDKR--SGQFECNATLEGH----ENEVKSVTWSKNGQFLATCSRDKSV 165
+ S + D T VWD R + + C +G+ E + +WS +G +A S D+ V
Sbjct: 251 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 310
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207
+VW+ + H + +V FHP + I+ SAS D
Sbjct: 311 YVWDTTSR---RVLYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 144 (55.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 56/243 (23%), Positives = 102/243 (41%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N TLKGH G V + +N G+M+ S DK + +W E+ G + K + GH +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GER--VKRL--KGHTSFVN 156
Query: 102 ETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHEN--EVKSVTWSKNGQFLAT 158
+ G + + S D T +WD R A ++ +N +V +VT++ + +
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRK-----KAAVQTFQNTYQVLAVTFNDTSDQIIS 211
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK---- 214
D + VW++ + + + H V + + L S + D+TV+++
Sbjct: 212 GGIDNDIKVWDLRQN---KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE------YK-PGNS 267
K I + + + ++ GS++A S D V +W YK PG++
Sbjct: 269 APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHA 328
Query: 268 AGI 270
I
Sbjct: 329 GSI 331
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 34/129 (26%), Positives = 59/129 (45%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG-H--QRTIR 101
T++GH V +S + +G+ + S D +R+W F K I H ++ +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+WSP G+ IA+ S D VWD S + L GH + V + + + + S
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYK--LPGHAGSINEVAFHPDEPIILSASS 348
Query: 162 DKSVWVWEV 170
DK +++ E+
Sbjct: 349 DKRLYMGEI 357
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 188 (71.2 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 58/194 (29%), Positives = 96/194 (49%)
Query: 39 EMINSQTLKG--------HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA 90
E IN ++LK H+ V++ ++ I+SCG DK ++++ ES G +
Sbjct: 595 EWINKKSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAES-GERLLE-- 651
Query: 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150
+S H I +S ++A+ S D +W+ R+G+ C E H +V ++
Sbjct: 652 -IS-AHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGK--CLYVYEEHTEQVNCCQFN 707
Query: 151 -KNGQFL-ATCSRD----KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204
+ GQ+L ATCS D +V +W++ +D+Y C + H+ V RF P D+ +AS
Sbjct: 708 NRRGQYLLATCSDDTYIKNTVQLWDL--KDKY-CRNTMFGHVNAVSHCRFSPNDDYIASC 764
Query: 205 SYDDTVKLFKEDKA 218
S D TVKL+ A
Sbjct: 765 STDGTVKLWNVHSA 778
Score = 132 (51.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 54/211 (25%), Positives = 93/211 (44%)
Query: 60 PQGTMISSC--GEDKNIRLWGKESFGNK----FTAKAILS-DGHQRTIRETAWSP-CGNF 111
PQ ++I C ED +G+E+ K + + S + ++ +++ ++ C
Sbjct: 965 PQESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTL 1024
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV- 170
I+SA DA VW+ + EC L+GH+ +K + +N + L+ S D +V VW +
Sbjct: 1025 ISSAH-DAVIQVWNWQLN--EC-VFLKGHKEAIKDFAFLENSKLLSW-SFDGTVKVWNIT 1079
Query: 171 -GE-EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL 228
G+ E ++ C H V P + +S S D T K++ + + L
Sbjct: 1080 TGKTEKDFAC------HRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSV----LHEL 1129
Query: 229 KSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
K H + V AF LAT D ++IW
Sbjct: 1130 KGHEACVRCSAFSPSNKLLATGDDKGDIRIW 1160
Score = 83 (34.3 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD---LVHTEHRAHNQDVN 346
G+T D + CH +++ A D R F + + SF+ ++H E + H V
Sbjct: 1081 GKTEKDFA-CHRGAVLSCAVSPDGSR-FSSTSADKTAKIWSFESSSVLH-ELKGHEACVR 1137
Query: 347 CVAWNPVVPGMLASCSDDGDVKLWQI 372
C A++P +LA+ D GD+++W I
Sbjct: 1138 CSAFSPSNK-LLATGDDKGDIRIWDI 1162
Score = 62 (26.9 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 358 LASCSDDGDVKLWQIKLEN 376
+ASCS DG VKLW + N
Sbjct: 761 IASCSTDGTVKLWNVHSAN 779
Score = 42 (19.8 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 358 LASCSDDGDVKLWQI 372
L S S DG VK+W I
Sbjct: 1064 LLSWSFDGTVKVWNI 1078
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 200 (75.5 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 55/202 (27%), Positives = 99/202 (49%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ +L+GH V +V+++P G ++S D +R W + FT + GH+ +
Sbjct: 107 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQ-----GHRHWVLS 161
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK---NGQ--FLA 157
+WSP G +AS + +WD +G+ + L GH + +++W N + ++A
Sbjct: 162 ISWSPDGKKLASGCKNGQILLWDPSTGK-QVGRALAGHSKWITALSWEPLHANPECRYVA 220
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217
+ S+D SV VW+ C ++ H Q V +R+ D +L SAS D T+K+++
Sbjct: 221 SSSKDGSVRVWDTTAG---RCERILTGHTQSVTCLRWGG-DGLLYSASQDRTIKVWRAH- 275
Query: 218 AEADWINFATLKSHTSTVWSLA 239
D + TL+ H V ++A
Sbjct: 276 ---DGVLCRTLQGHGHWVNTMA 294
Score = 188 (71.2 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 86/354 (24%), Positives = 151/354 (42%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T +GH+ V ++SW+P G ++S ++ I LW + K +A+ GH + I +
Sbjct: 151 TCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPST--GKQVGRALA--GHSKWITALS 206
Query: 105 WSPC-GN----FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
W P N ++AS+S D + VWD +G+ C L GH V + W +G L +
Sbjct: 207 WEPLHANPECRYVASSSKDGSVRVWDTTAGR--CERILTGHTQSVTCLRWGGDG-LLYSA 263
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
S+D+++ VW D C + H V + D L + +++
Sbjct: 264 SQDRTIKVWRA--HDGVLCRT-LQGHGHWVNTMALST-DYALRTGAFEPAEASVNAQDLR 319
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW---KEYKP-----GNSAGIP 271
+ LK + ++L R RL + SDD T+ +W ++ KP G+ A I
Sbjct: 320 G---SLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALIN 376
Query: 272 ----TPDND-----SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322
+PD+ S K + G G+ + + H+ + A D+ R+
Sbjct: 377 QVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRG-HVAAVYQIAWSADS-RLLVSG-- 432
Query: 323 AGDSDMVSFDLVHTEHRA----HNQDVNCVAWNPVVPGM-LASCSDDGDVKLWQ 371
+ DS + +D+ + A H +V V W+P G +AS D +++W+
Sbjct: 433 SSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP--DGQRVASGGKDKCLRIWR 484
Score = 166 (63.5 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 46/176 (26%), Positives = 84/176 (47%)
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWD--KRSGQFECNATLEGHENEVKSVTWSK 151
+GH + A+SP G ++AS S D T WD + F C +GH + V S++WS
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----QGHRHWVLSISWSP 166
Query: 152 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-----NILASASY 206
+G+ LA+ ++ + +W+ + A + H + + + + P +AS+S
Sbjct: 167 DGKKLASGCKNGQILLWDPSTGKQVGRA--LAGHSKWITALSWEPLHANPECRYVASSSK 224
Query: 207 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262
D +V+++ + I L HT +V L + G L + S D T+K+W+ +
Sbjct: 225 DGSVRVWDTTAGRCERI----LTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAH 275
Score = 119 (46.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 45/171 (26%), Positives = 77/171 (45%)
Query: 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED-EYECAAVINAHIQDVKK 191
C ++LEGH V SV +S G++LA+ S D +V W++ E + C H V
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----QGHRHWVLS 161
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR----- 246
+ + P LAS + + L+ D + + A L H+ + +L+++ + +
Sbjct: 162 ISWSPDGKKLASGCKNGQILLW--DPSTGKQVGRA-LAGHSKWITALSWEPLHANPECRY 218
Query: 247 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 297
+A+ S D +V++W + G I T SV C G G +Y S
Sbjct: 219 VASSSKDGSVRVW-DTTAGRCERILTGHTQSV---TCLRWGGDG-LLYSAS 264
Score = 57 (25.1 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377
R H V +AW+ +L S S D +K+W +K + L
Sbjct: 411 RGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKL 448
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 209 (78.6 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 66/224 (29%), Positives = 107/224 (47%)
Query: 44 QTLKGHQGRVWNVSWNP-QGTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
Q K H V++V W+ +G + G D+ +++W + GN GH+ I
Sbjct: 100 QVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDP-TVGNSLCTFR----GHESVIY 154
Query: 102 ETAWSPC--GNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSK-NGQFLA 157
T WSP G F ASAS D T +WD K +G + H+ E+ S W K N +
Sbjct: 155 STIWSPHIPGCF-ASASGDQTLRIWDVKTTG---VRIVIPAHQTEILSCDWCKYNENLVV 210
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKED 216
T + D S+ W++ + + + H +++V+F PF ++LAS SYD TV+ +
Sbjct: 211 TGAVDCSLRGWDL--RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS 268
Query: 217 KAEADWINFATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKIW 259
K + T++ HT L + +++A CS D T+KI+
Sbjct: 269 KPDP---LLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIY 309
Score = 183 (69.5 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 66/264 (25%), Positives = 115/264 (43%)
Query: 53 VWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GN 110
+++V+W+ ++ +C D +++LW K T + H + + WS G
Sbjct: 65 LFDVTWSENNEHVLVTCSGDGSLQLWDTA----KATGPLQVYKEHTQEVYSVDWSQTRGE 120
Query: 111 -FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWV 167
+ S S+D T VWD G C T GHE+ + S WS + G F A+ S D+++ +
Sbjct: 121 QLVVSGSWDQTVKVWDPTVGNSLC--TFRGHESVIYSTIWSPHIPGCF-ASASGDQTLRI 177
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFA 226
W+V VI AH ++ + + +N++ + + D +++ + D F
Sbjct: 178 WDVKTTG---VRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGW--DLRNVRQPVFE 232
Query: 227 TLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285
L HT + + F S LA+CS D TV+ W KP + T ++ + + C L
Sbjct: 233 LL-GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDPL--LETVEHHTEFTCGLDL 289
Query: 286 SGHHGRTIYDISWCHLTDLIATAC 309
S + D SW + C
Sbjct: 290 SLQSPTQVADCSWDETIKIYDPVC 313
>UNIPROTKB|Q5RAN6 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9601 "Pongo abelii"
[GO:0006999 "nuclear pore organization" evidence=ISS] [GO:0007080
"mitotic metaphase plate congression" evidence=ISS] [GO:0031080
"nuclear pore outer ring" evidence=ISS] [GO:0051315 "attachment of
spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISS] [GO:0000776 "kinetochore"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
HOGENOM:HOG000216896 EMBL:CR858979 RefSeq:NP_001125688.1
UniGene:Pab.10091 ProteinModelPortal:Q5RAN6 PRIDE:Q5RAN6
GeneID:100172610 KEGG:pon:100172610 InParanoid:Q5RAN6
Uniprot:Q5RAN6
Length = 360
Score = 178 (67.7 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 45/142 (31%), Positives = 75/142 (52%)
Query: 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190
F + H++ + V++ +G+ +ATCS D+SV VW+ E ++ C A H V
Sbjct: 2 FVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVW 61
Query: 191 KVRF-HP-FDNILASASYDDTVKLFKE------DK--AEADWINFATLKSHTSTVWSLAF 240
+V + HP F +LAS S+D T +++E DK ++ W+ TL ++V + F
Sbjct: 62 RVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKF 121
Query: 241 --DRIGSRLATCSDDATVKIWK 260
+G LATCS D V+I++
Sbjct: 122 APKHMGLMLATCSADGIVRIYE 143
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 54/188 (28%), Positives = 90/188 (47%)
Query: 186 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-DWINFATLKSHTSTVWSL--AFDR 242
I DV FH +A+ S D +VK++ DK+E+ DW A+ K+H+ +VW + A
Sbjct: 15 IHDVS-FDFH--GRRMATCSSDQSVKVW--DKSESGDWHCTASWKTHSGSVWRVTWAHPE 69
Query: 243 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC--H 300
G LA+CS D T +W+E ++ + S W TL ++ D+ + H
Sbjct: 70 FGQVLASCSFDRTAAVWEEIVGESNDKLR---GQSHWVKRTTLVDSR-TSVTDVKFAPKH 125
Query: 301 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP----VVPG 356
+ ++AT D +RI+ E P+ ++ + L H + +C++WNP
Sbjct: 126 MGLMLATCSADGIVRIY-EAPDV--MNLSQWSLQH--EISCKLSCSCISWNPSSSRAHSP 180
Query: 357 MLASCSDD 364
M+A SDD
Sbjct: 181 MIAVGSDD 188
Score = 131 (51.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 42/137 (30%), Positives = 67/137 (48%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + +VS++ G +++C D+++++W K G+ + + H ++ W+ P
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKT--HSGSVWRVTWAHP 68
Query: 108 -CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK---------SVTWSK-----N 152
G +AS SFD T AVW++ G E N L G + VK SVT K
Sbjct: 69 EFGQVLASCSFDRTAAVWEEIVG--ESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHM 126
Query: 153 GQFLATCSRDKSVWVWE 169
G LATCS D V ++E
Sbjct: 127 GLMLATCSADGIVRIYE 143
Score = 124 (48.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 231 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290
H + ++FD G R+ATCS D +VK+W + + G+ W C + H G
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGD------------WHCTASWKTHSG 58
Query: 291 RTIYDISWCH--LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD---- 344
+++ ++W H ++A+ D +++E G+S+ H R D
Sbjct: 59 -SVWRVTWAHPEFGQVLASCSFDRTAAVWEEI--VGESNDKLRGQSHWVKRTTLVDSRTS 115
Query: 345 VNCVAWNPVVPG-MLASCSDDGDVKLWQ 371
V V + P G MLA+CS DG V++++
Sbjct: 116 VTDVKFAPKHMGLMLATCSADGIVRIYE 143
Score = 81 (33.6 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 49/208 (23%), Positives = 85/208 (40%)
Query: 136 TLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGE---------EDEYECAAVINA 184
TL V V ++ G LATCS D V ++E + + E C +
Sbjct: 108 TLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSC 167
Query: 185 HIQDVKKVRFHPFDNILASASYDDT------VKLFKEDKAEADWINFATLKSHTSTVWSL 238
+ R H ++A S D + V++F+ ++ + TL + T V +
Sbjct: 168 ISWNPSSSRAH--SPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDI 225
Query: 239 AF-DRIGSR---LATCSDDATVKIWKEY-KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 293
AF +G LA + D + K K S+G PT + V H+ + +
Sbjct: 226 AFAPNLGRSFHILAIATKDVRIFTLKPVRKELTSSGGPTKFEIHI---VAHFDNHNSQ-V 281
Query: 294 YDISWCHLTDLIATACGDDA-IRIFKEN 320
+ +SW ++T + + GDD +R++K N
Sbjct: 282 WRVSW-NITGTVLASSGDDGCVRLWKAN 308
Score = 76 (31.8 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 304 LIATACGDDAIRIF------KENPEAGDSDMVSFDLV-HTEHRAHNQDVNCVAWNPVVPG 356
++A A D +RIF KE +G +V H ++ HN V V+WN +
Sbjct: 237 ILAIATKD--VRIFTLKPVRKELTSSGGPTKFEIHIVAHFDN--HNSQVWRVSWN-ITGT 291
Query: 357 MLASCSDDGDVKLWQ 371
+LAS DDG V+LW+
Sbjct: 292 VLASSGDDGCVRLWK 306
Score = 76 (31.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285
A +H S VW ++++ G+ LA+ DD V++WK N DN WKC L
Sbjct: 272 AHFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWK----ANYM-----DN---WKCTGIL 319
Query: 286 SGH 288
G+
Sbjct: 320 KGN 322
Score = 76 (31.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 47 KGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLW 77
K H G VW V+W +P+ G +++SC D+ +W
Sbjct: 54 KTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVW 86
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 206 (77.6 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 68/232 (29%), Positives = 101/232 (43%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD--GHQRTIRE 102
TLKGH G V VSW+P GT +++C DK +R+W E T K + S+ GH + ++
Sbjct: 190 TLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPE------TGKQVGSELKGHAKWVQG 243
Query: 103 TAWSPCGNF------IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQF 155
AW P + + SAS D T +W +G+ E L GH+ V V W NG
Sbjct: 244 IAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTE--HVLSGHKGSVSCVRWGAGNGTG 301
Query: 156 LA-TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
+ T S DK+V VW+ AV + D+K H +++ S + F
Sbjct: 302 VVYTASHDKTVKVWD----------AVKGTLLHDLKS-HAHWVNHLALSTDFVCRTGFFD 350
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKIWKEYKPG 265
K T K+ + +I RL + SDD T+ ++ G
Sbjct: 351 HTKTVPATAEEKTAKAKERYEKAARVGGKIVERLVSASDDFTMYLFDPLNDG 402
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 43/121 (35%), Positives = 67/121 (55%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
GHQ +V +V+++P G+MI+S G D +LW KF GH + + ++S
Sbjct: 411 GHQKQVNHVTFSPDGSMIASAGWDNATKLWNARD--GKFINTL---RGHVAPVYQCSFSA 465
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
+ +AS D T VW+ R+G+ + L GHE+EV V WS +GQ + + RDK+V +
Sbjct: 466 DSRLLVTASKDTTLKVWNVRTGKLATD--LPGHEDEVYGVDWSPDGQRVGSGGRDKAVRL 523
Query: 168 W 168
W
Sbjct: 524 W 524
Score = 173 (66.0 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 55/177 (31%), Positives = 85/177 (48%)
Query: 95 GHQRTIRETAWSPCGNF-IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 153
GH I +SP + +A+ S D T +WD +G + TL+GH V V+WS +G
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPK--HTLKGHAGWVLGVSWSPDG 207
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----DNI--LASASYD 207
LATCS DK+V +W+ E + + + H + V+ + + P D L SAS D
Sbjct: 208 TRLATCSMDKTVRIWD--PETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKD 265
Query: 208 DTVKLFKEDKAEADWINFATLKSHTSTV-WSLAFDRIGSRLATCSDDATVKIWKEYK 263
T +++ + + + + K S V W A + G + T S D TVK+W K
Sbjct: 266 FTARIWTVNTGRTEHV-LSGHKGSVSCVRWG-AGNGTGV-VYTASHDKTVKVWDAVK 319
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 46/148 (31%), Positives = 74/148 (50%)
Query: 67 SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK 126
S +D + L+ + G K A+ I GHQ+ + +SP G+ IASA +D T +W+
Sbjct: 386 SASDDFTMYLFDPLNDGTKPIARMI---GHQKQVNHVTFSPDGSMIASAGWDNATKLWNA 442
Query: 127 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 186
R G+F N TL GH V ++S + + L T S+D ++ VW V + A + H
Sbjct: 443 RDGKF-IN-TLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTG---KLATDLPGHE 497
Query: 187 QDVKKVRFHPFDNILASASYDDTVKLFK 214
+V V + P + S D V+L++
Sbjct: 498 DEVYGVDWSPDGQRVGSGGRDKAVRLWR 525
Score = 125 (49.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 36/150 (24%), Positives = 70/150 (46%)
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
+ SAS D T ++D + + A + GH+ +V VT+S +G +A+ D + +W
Sbjct: 384 LVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNA- 442
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT-LKS 230
+ ++ + H+ V + F +L +AS D T+K++ + AT L
Sbjct: 443 RDGKF--INTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGK-----LATDLPG 495
Query: 231 HTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
H V+ + + G R+ + D V++W+
Sbjct: 496 HEDEVYGVDWSPDGQRVGSGGRDKAVRLWR 525
Score = 51 (23.0 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
H + VN V ++P M+AS D KLW +
Sbjct: 412 HQKQVNHVTFSPD-GSMIASAGWDNATKLWNAR 443
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 215 (80.7 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 87/358 (24%), Positives = 155/358 (43%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
SQT+ GH V VS++P G ++S D +RLW + FT K GH+ +
Sbjct: 102 SQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCK-----GHKNWVLT 156
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW-----SKNGQFLA 157
AWSP G + S S W+ + G+ E + L GH+ + ++W S +
Sbjct: 157 VAWSPDGKHLVSGSKSGEICCWNPKKGELE-GSPLTGHKKWITGISWEPVHLSSPCRRFV 215
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVK------ 211
T S+D +W++ + C ++ H V V++ D I+ + S D T+K
Sbjct: 216 TSSKDGDARIWDITLKKSIIC---LSGHTLAVTCVKWGG-DGIIYTGSQDCTIKMWETTQ 271
Query: 212 --LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD-DATVKIWKEYKPGNSA 268
L +E K WIN L + + + AFD G + + ++ + + K +
Sbjct: 272 GKLIRELKGHGHWINSLALSTEY-VLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSPE 330
Query: 269 GIPTPDNDS---VWKCVCT------LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319
+ + +D +W+ + L+GH + + + + IA+A D ++R++
Sbjct: 331 RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQ-QLVNHVYFSPDGKWIASASFDKSVRLWN- 388
Query: 320 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377
G ++ V T R H V V+W+ +L S S D +K+W+I+ + L
Sbjct: 389 ----G----ITGQFV-TVFRGHVGPVYQVSWS-ADSRLLLSGSKDSTLKIWEIRTKKL 436
Score = 164 (62.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 44/148 (29%), Positives = 73/148 (49%)
Query: 67 SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK 126
S +D + LW E +K K + GHQ+ + +SP G +IASASFD + +W+
Sbjct: 334 SGSDDFTMFLW--EPSVSKQPKKRLT--GHQQLVNHVYFSPDGKWIASASFDKSVRLWNG 389
Query: 127 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 186
+GQF GH V V+WS + + L + S+D ++ +WE+ + + + H
Sbjct: 390 ITGQFV--TVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTK---KLKQDLPGHA 444
Query: 187 QDVKKVRFHPFDNILASASYDDTVKLFK 214
+V V + P + S D +KL+K
Sbjct: 445 DEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/151 (26%), Positives = 73/151 (48%)
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
+ S S D T +W+ + + L GH+ V V +S +G+++A+ S DKSV +W G
Sbjct: 332 LVSGSDDFTMFLWEPSVSK-QPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN-G 389
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF--KEDKAEADWINFATLK 229
++ V H+ V +V + +L S S D T+K++ + K + D L
Sbjct: 390 ITGQF--VTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQD------LP 441
Query: 230 SHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
H V+++ + G ++ + D +K+WK
Sbjct: 442 GHADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 211 (79.3 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 63/231 (27%), Positives = 114/231 (49%)
Query: 37 RCEMINS--QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
RC + + L GH+G V+ ++P G+ ++S G D+ I LW + + A L
Sbjct: 51 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY---ATLK- 106
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG- 153
GH + E ++ G+ + SAS D T AVWD +G E L+GH + V S ++ G
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGP 164
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
Q + T S D +V +W++ ++ + N + V V F+ + + S D+ +K++
Sbjct: 165 QLVCTGSDDGTVKLWDIRKKAAIQTFQ--NTY--QVLAVTFNDTSDQIISGGIDNDIKVW 220
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
+ + + T++ H +V L+ GS L + + D TV++W + +P
Sbjct: 221 DLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW-DVRP 266
Score = 150 (57.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 45/162 (27%), Positives = 74/162 (45%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
+V V++N I S G D +I++W NK T GH ++ + S G++
Sbjct: 195 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQ--NKLT---YTMRGHADSVTGLSLSSEGSY 249
Query: 112 IASASFDATTAVWDKR--SGQFECNATLEGH----ENEVKSVTWSKNGQFLATCSRDKSV 165
+ S + D T VWD R + + C +G+ E + +WS +G +A S D+ V
Sbjct: 250 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 309
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207
+VW+ + H + +V FHP + I+ SAS D
Sbjct: 310 YVWDTTSR---RILYKLPGHAGSINEVAFHPDEPIIISASSD 348
Score = 145 (56.1 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 56/243 (23%), Positives = 102/243 (41%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N TLKGH G V + +N G+M+ S DK + +W E+ G + K + GH +
Sbjct: 101 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GER--VKRL--KGHTSFVN 155
Query: 102 ETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHEN--EVKSVTWSKNGQFLAT 158
+ G + + S D T +WD R A ++ +N +V +VT++ + +
Sbjct: 156 SCYPARRGPQLVCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 210
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK---- 214
D + VW++ + + + H V + + L S + D+TV+++
Sbjct: 211 GGIDNDIKVWDLRQN---KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 267
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE------YK-PGNS 267
K I + + + ++ GS++A S D V +W YK PG++
Sbjct: 268 APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 327
Query: 268 AGI 270
I
Sbjct: 328 GSI 330
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 34/129 (26%), Positives = 59/129 (45%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG-H--QRTIR 101
T++GH V +S + +G+ + S D +R+W F K I H ++ +
Sbjct: 230 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 289
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+WSP G+ IA+ S D VWD S + L GH + V + + + + S
Sbjct: 290 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK--LPGHAGSINEVAFHPDEPIIISASS 347
Query: 162 DKSVWVWEV 170
DK +++ E+
Sbjct: 348 DKRLYMGEI 356
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 211 (79.3 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 63/231 (27%), Positives = 114/231 (49%)
Query: 37 RCEMINS--QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
RC + + L GH+G V+ ++P G+ ++S G D+ I LW + + A L
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY---ATLK- 107
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG- 153
GH + E ++ G+ + SAS D T AVWD +G E L+GH + V S ++ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGP 165
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
Q + T S D +V +W++ ++ + N + V V F+ + + S D+ +K++
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQ--NTY--QVLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
+ + + T++ H +V L+ GS L + + D TV++W + +P
Sbjct: 222 DLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW-DVRP 267
Score = 150 (57.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 45/162 (27%), Positives = 74/162 (45%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
+V V++N I S G D +I++W NK T GH ++ + S G++
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQ--NKLT---YTMRGHADSVTGLSLSSEGSY 250
Query: 112 IASASFDATTAVWDKR--SGQFECNATLEGH----ENEVKSVTWSKNGQFLATCSRDKSV 165
+ S + D T VWD R + + C +G+ E + +WS +G +A S D+ V
Sbjct: 251 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 310
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207
+VW+ + H + +V FHP + I+ SAS D
Sbjct: 311 YVWDTTSR---RILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 145 (56.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 56/243 (23%), Positives = 102/243 (41%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N TLKGH G V + +N G+M+ S DK + +W E+ G + K + GH +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GER--VKRL--KGHTSFVN 156
Query: 102 ETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHEN--EVKSVTWSKNGQFLAT 158
+ G + + S D T +WD R A ++ +N +V +VT++ + +
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 211
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK---- 214
D + VW++ + + + H V + + L S + D+TV+++
Sbjct: 212 GGIDNDIKVWDLRQN---KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE------YK-PGNS 267
K I + + + ++ GS++A S D V +W YK PG++
Sbjct: 269 APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 328
Query: 268 AGI 270
I
Sbjct: 329 GSI 331
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 34/129 (26%), Positives = 59/129 (45%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG-H--QRTIR 101
T++GH V +S + +G+ + S D +R+W F K I H ++ +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+WSP G+ IA+ S D VWD S + L GH + V + + + + S
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK--LPGHAGSINEVAFHPDEPIILSASS 348
Query: 162 DKSVWVWEV 170
DK +++ E+
Sbjct: 349 DKRLYMGEI 357
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 211 (79.3 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 63/231 (27%), Positives = 114/231 (49%)
Query: 37 RCEMINS--QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
RC + + L GH+G V+ ++P G+ ++S G D+ I LW + + A L
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY---ATLK- 107
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG- 153
GH + E ++ G+ + SAS D T AVWD +G E L+GH + V S ++ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGP 165
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
Q + T S D +V +W++ ++ + N + V V F+ + + S D+ +K++
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQ--NTY--QVLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
+ + + T++ H +V L+ GS L + + D TV++W + +P
Sbjct: 222 DLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW-DVRP 267
Score = 150 (57.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 45/162 (27%), Positives = 74/162 (45%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
+V V++N I S G D +I++W NK T GH ++ + S G++
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQ--NKLT---YTMRGHADSVTGLSLSSEGSY 250
Query: 112 IASASFDATTAVWDKR--SGQFECNATLEGH----ENEVKSVTWSKNGQFLATCSRDKSV 165
+ S + D T VWD R + + C +G+ E + +WS +G +A S D+ V
Sbjct: 251 LLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 310
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207
+VW+ + H + +V FHP + I+ SAS D
Sbjct: 311 YVWDTTSR---RILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 145 (56.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 56/243 (23%), Positives = 102/243 (41%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N TLKGH G V + +N G+M+ S DK + +W E+ G + K + GH +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GER--VKRL--KGHTSFVN 156
Query: 102 ETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHEN--EVKSVTWSKNGQFLAT 158
+ G + + S D T +WD R A ++ +N +V +VT++ + +
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 211
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK---- 214
D + VW++ + + + H V + + L S + D+TV+++
Sbjct: 212 GGIDNDIKVWDLRQN---KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE------YK-PGNS 267
K I + + + ++ GS++A S D V +W YK PG++
Sbjct: 269 APKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 328
Query: 268 AGI 270
I
Sbjct: 329 GSI 331
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 34/129 (26%), Positives = 59/129 (45%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG-H--QRTIR 101
T++GH V +S + +G+ + S D +R+W F K I H ++ +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLL 290
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+WSP G+ IA+ S D VWD S + L GH + V + + + + S
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK--LPGHAGSINEVAFHPDEPIILSASS 348
Query: 162 DKSVWVWEV 170
DK +++ E+
Sbjct: 349 DKRLYMGEI 357
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 211 (79.3 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 63/231 (27%), Positives = 114/231 (49%)
Query: 37 RCEMINS--QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
RC + + L GH+G V+ ++P G+ ++S G D+ I LW + + A L
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY---ATLK- 107
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG- 153
GH + E ++ G+ + SAS D T AVWD +G E L+GH + V S ++ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGP 165
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
Q + T S D +V +W++ ++ + N + V V F+ + + S D+ +K++
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQ--NTY--QVLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
+ + + T++ H +V L+ GS L + + D TV++W + +P
Sbjct: 222 DLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW-DVRP 267
Score = 150 (57.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 45/162 (27%), Positives = 74/162 (45%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
+V V++N I S G D +I++W NK T GH ++ + S G++
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQ--NKLT---YTMRGHADSVTGLSLSSEGSY 250
Query: 112 IASASFDATTAVWDKR--SGQFECNATLEGH----ENEVKSVTWSKNGQFLATCSRDKSV 165
+ S + D T VWD R + + C +G+ E + +WS +G +A S D+ V
Sbjct: 251 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 310
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207
+VW+ + H + +V FHP + I+ SAS D
Sbjct: 311 YVWDTTSR---RILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 145 (56.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 56/243 (23%), Positives = 102/243 (41%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N TLKGH G V + +N G+M+ S DK + +W E+ G + K + GH +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GER--VKRL--KGHTSFVN 156
Query: 102 ETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHEN--EVKSVTWSKNGQFLAT 158
+ G + + S D T +WD R A ++ +N +V +VT++ + +
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 211
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK---- 214
D + VW++ + + + H V + + L S + D+TV+++
Sbjct: 212 GGIDNDIKVWDLRQN---KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE------YK-PGNS 267
K I + + + ++ GS++A S D V +W YK PG++
Sbjct: 269 APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 328
Query: 268 AGI 270
I
Sbjct: 329 GSI 331
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 34/129 (26%), Positives = 59/129 (45%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG-H--QRTIR 101
T++GH V +S + +G+ + S D +R+W F K I H ++ +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+WSP G+ IA+ S D VWD S + L GH + V + + + + S
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK--LPGHAGSINEVAFHPDEPIILSASS 348
Query: 162 DKSVWVWEV 170
DK +++ E+
Sbjct: 349 DKRLYMGEI 357
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 211 (79.3 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 63/231 (27%), Positives = 114/231 (49%)
Query: 37 RCEMINS--QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
RC + + L GH+G V+ ++P G+ ++S G D+ I LW + + A L
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNY---ATLK- 107
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG- 153
GH + E ++ G+ + SAS D T AVWD +G E L+GH + V S ++ G
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGP 165
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
Q + T S D +V +W++ ++ + N + V V F+ + + S D+ +K++
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQ--NTY--QVLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
+ + + T++ H +V L+ GS L + + D TV++W + +P
Sbjct: 222 DLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW-DVRP 267
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 52/237 (21%), Positives = 98/237 (41%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N TLKGH G V + +N G+M+ S DK + +W E+ G + K + GH +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GER--VKRL--KGHTSFVN 156
Query: 102 ETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHEN--EVKSVTWSKNGQFLAT 158
+ G + + S D T +WD R A ++ +N +V +VT++ + +
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 211
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK---- 214
D + VW++ + + + H V + + L S + D+TV+++
Sbjct: 212 GGIDNDIKVWDLRQN---KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIP 271
K I + + + ++ GS++A S D+ + W + IP
Sbjct: 269 APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRSLGQIP 325
>UNIPROTKB|Q96EE3 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9606 "Homo sapiens"
[GO:0015031 "protein transport" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0006999 "nuclear pore organization" evidence=IMP] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=IMP] [GO:0007080 "mitotic metaphase
plate congression" evidence=IMP] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005635 "nuclear
envelope" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0008645 "hexose transport" evidence=TAS] [GO:0010827
"regulation of glucose transport" evidence=TAS] [GO:0015758
"glucose transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0044281 GO:GO:0015031
GO:GO:0005975 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0019221 GO:GO:0015758 GO:GO:0010827 GO:GO:0055085
GO:GO:0051028 GO:GO:0051315 GO:GO:0000236 GO:GO:0000777
GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
HOGENOM:HOG000216896 OMA:YEAPDIM EMBL:AF255625 EMBL:AF431970
EMBL:AF514996 EMBL:AF136976 EMBL:AK056940 EMBL:AK291226
EMBL:BC012430 IPI:IPI00185533 IPI:IPI00220609 RefSeq:NP_001013455.1
RefSeq:NP_112493.2 UniGene:Hs.301048 ProteinModelPortal:Q96EE3
SMR:Q96EE3 IntAct:Q96EE3 STRING:Q96EE3 DMDM:257051064 PaxDb:Q96EE3
PRIDE:Q96EE3 DNASU:81929 Ensembl:ENST00000262124
Ensembl:ENST00000399892 GeneID:81929 KEGG:hsa:81929 UCSC:uc002krq.3
UCSC:uc002krr.3 GeneCards:GC18P012947 HGNC:HGNC:30379 HPA:HPA039964
MIM:609263 neXtProt:NX_Q96EE3 PharmGKB:PA134912135
InParanoid:Q96EE3 OrthoDB:EOG4DJJWR PhylomeDB:Q96EE3 ChiTaRS:SEH1L
GenomeRNAi:81929 NextBio:72265 Bgee:Q96EE3 CleanEx:HS_SEH1L
Genevestigator:Q96EE3 GermOnline:ENSG00000085415 Uniprot:Q96EE3
Length = 360
Score = 178 (67.7 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 45/142 (31%), Positives = 75/142 (52%)
Query: 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190
F + H++ + V++ +G+ +ATCS D+SV VW+ E ++ C A H V
Sbjct: 2 FVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVW 61
Query: 191 KVRF-HP-FDNILASASYDDTVKLFKE------DK--AEADWINFATLKSHTSTVWSLAF 240
+V + HP F +LAS S+D T +++E DK ++ W+ TL ++V + F
Sbjct: 62 RVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKF 121
Query: 241 --DRIGSRLATCSDDATVKIWK 260
+G LATCS D V+I++
Sbjct: 122 APKHMGLMLATCSADGIVRIYE 143
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 54/188 (28%), Positives = 90/188 (47%)
Query: 186 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-DWINFATLKSHTSTVWSL--AFDR 242
I DV FH +A+ S D +VK++ DK+E+ DW A+ K+H+ +VW + A
Sbjct: 15 IHDVS-FDFH--GRRMATCSSDQSVKVW--DKSESGDWHCTASWKTHSGSVWRVTWAHPE 69
Query: 243 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC--H 300
G LA+CS D T +W+E ++ + S W TL ++ D+ + H
Sbjct: 70 FGQVLASCSFDRTAAVWEEIVGESNDKLR---GQSHWVKRTTLVDSR-TSVTDVKFAPKH 125
Query: 301 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP----VVPG 356
+ ++AT D +RI+ E P+ ++ + L H + +C++WNP
Sbjct: 126 MGLMLATCSADGIVRIY-EAPDV--MNLSQWSLQH--EISCKLSCSCISWNPSSSRAHSP 180
Query: 357 MLASCSDD 364
M+A SDD
Sbjct: 181 MIAVGSDD 188
Score = 131 (51.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 42/137 (30%), Positives = 67/137 (48%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + +VS++ G +++C D+++++W K G+ + + H ++ W+ P
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKT--HSGSVWRVTWAHP 68
Query: 108 -CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK---------SVTWSK-----N 152
G +AS SFD T AVW++ G E N L G + VK SVT K
Sbjct: 69 EFGQVLASCSFDRTAAVWEEIVG--ESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHM 126
Query: 153 GQFLATCSRDKSVWVWE 169
G LATCS D V ++E
Sbjct: 127 GLMLATCSADGIVRIYE 143
Score = 124 (48.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 231 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290
H + ++FD G R+ATCS D +VK+W + + G+ W C + H G
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGD------------WHCTASWKTHSG 58
Query: 291 RTIYDISWCH--LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD---- 344
+++ ++W H ++A+ D +++E G+S+ H R D
Sbjct: 59 -SVWRVTWAHPEFGQVLASCSFDRTAAVWEEI--VGESNDKLRGQSHWVKRTTLVDSRTS 115
Query: 345 VNCVAWNPVVPG-MLASCSDDGDVKLWQ 371
V V + P G MLA+CS DG V++++
Sbjct: 116 VTDVKFAPKHMGLMLATCSADGIVRIYE 143
Score = 82 (33.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 49/208 (23%), Positives = 85/208 (40%)
Query: 136 TLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGE---------EDEYECAAVINA 184
TL V V ++ G LATCS D V ++E + + E C +
Sbjct: 108 TLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSC 167
Query: 185 HIQDVKKVRFHPFDNILASASYDDT------VKLFKEDKAEADWINFATLKSHTSTVWSL 238
+ R H ++A S D + V++F+ ++ + TL + T V +
Sbjct: 168 ISWNPSSSRAH--SPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDI 225
Query: 239 AF-DRIGSR---LATCSDDATVKIWKEY-KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 293
AF +G LA + D + K K S+G PT + V H+ + +
Sbjct: 226 AFAPNLGRSFHILAIATKDVRIFTLKPVRKELTSSGGPTKFEIHI---VAQFDNHNSQ-V 281
Query: 294 YDISWCHLTDLIATACGDDA-IRIFKEN 320
+ +SW ++T + + GDD +R++K N
Sbjct: 282 WRVSW-NITGTVLASSGDDGCVRLWKAN 308
Score = 77 (32.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285
A +H S VW ++++ G+ LA+ DD V++WK N DN WKC L
Sbjct: 272 AQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWK----ANYM-----DN---WKCTGIL 319
Query: 286 SGH 288
G+
Sbjct: 320 KGN 322
Score = 76 (31.8 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 47 KGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLW 77
K H G VW V+W +P+ G +++SC D+ +W
Sbjct: 54 KTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVW 86
Score = 75 (31.5 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 304 LIATACGDDAIRIFKENP---EAGDSD-MVSFDL-VHTEHRAHNQDVNCVAWNPVVPGML 358
++A A D +RIF P E S F++ + + HN V V+WN + +L
Sbjct: 237 ILAIATKD--VRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWN-ITGTVL 293
Query: 359 ASCSDDGDVKLWQ 371
AS DDG V+LW+
Sbjct: 294 ASSGDDGCVRLWK 306
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 213 (80.0 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 86/337 (25%), Positives = 148/337 (43%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+ KGH+ + ++ ++P G I+S D ++ +W K ++A GH+ +
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNM-----KPQSRAYRFTGHKDAVTCV 66
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+SP + +AS+S D T +W S + E + H V+SV +S +GQ L T S D+
Sbjct: 67 QFSPSAHLLASSSRDKTVRLWVP-SVKGE-SVLFRAHTGSVRSVCFSADGQSLLTASDDQ 124
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
S+ +W V + + + H V+ RF P ++ S S D TVKL+ D + I
Sbjct: 125 SIKLWSVHRQ---KIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLW--DASSRQLI 179
Query: 224 N-FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK-------EYKPGNSAGI----- 270
+ F ++S V F + +AT S D TV++W ++ +SA +
Sbjct: 180 HTFCEPGGYSSYV---DFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSF 236
Query: 271 -P------TPDNDSVWKCV--------CTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 315
P T +DS K + TL GH G +S+ D A+A D +
Sbjct: 237 HPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASC-VSFSRSGDQFASAGSDQQVM 295
Query: 316 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 352
+++ N ++ D V +HR + + A +P
Sbjct: 296 VWRTNFDSVDYSRVLQQ--KRDHRTPSAQASGAAGDP 330
Score = 207 (77.9 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 80/304 (26%), Positives = 129/304 (42%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH+ I +SP G IAS S DA+ VW+ + T GH++ V V +S +
Sbjct: 16 GHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFT--GHKDAVTCVQFSPSAH 73
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
LA+ SRDK+V +W + E + + AH V+ V F L +AS D ++KL+
Sbjct: 74 LLASSSRDKTVRLWVPSVKGE---SVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWS 130
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY---------KPG 265
+ + TL+ H + V F G + + SDD TVK+W +PG
Sbjct: 131 VHRQKI----ICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPG 186
Query: 266 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE--- 322
+ S C+ T S + ++DI H T L A+ +P
Sbjct: 187 GYSSYVDFHPSST--CIATASSDNTVRVWDIR-TH-TLLQHYQVHSAAVNALSFHPSGNH 242
Query: 323 ----AGDS-----DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
+ DS D++ L++T H H +CV+++ AS D V +W+
Sbjct: 243 LLTASSDSTLKILDLLEGRLLYTLH-GHQGSASCVSFSRS-GDQFASAGSDQQVMVWRTN 300
Query: 374 LENL 377
+++
Sbjct: 301 FDSV 304
Score = 188 (71.2 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 59/218 (27%), Positives = 94/218 (43%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
S + H G V +V ++ G + + +D++I+LW K L + H +R
Sbjct: 95 SVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHR--QKIICT--LRE-HNNWVRC 149
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+SP G + S S D T +WD S Q G + V + + +AT S D
Sbjct: 150 ARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSY--VDFHPSSTCIATASSD 207
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
+V VW++ + V H V + FHP N L +AS D T+K+ D E
Sbjct: 208 NTVRVWDIRTHTLLQHYQV---HSAAVNALSFHPSGNHLLTASSDSTLKIL--DLLEGRL 262
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
+ TL H + ++F R G + A+ D V +W+
Sbjct: 263 LY--TLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWR 298
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 63/246 (25%), Positives = 114/246 (46%)
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
+GH + + S+ +S +G+ +A+ S D SV VW + + A H V V+F P
Sbjct: 15 KGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSR---AYRFTGHKDAVTCVQFSPS 71
Query: 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257
++LAS+S D TV+L+ + + + F ++HT +V S+ F G L T SDD ++K
Sbjct: 72 AHLLASSSRDKTVRLWVPS-VKGESVLF---RAHTGSVRSVCFSADGQSLLTASDDQSIK 127
Query: 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS-------W-CHLTDLIATAC 309
+W ++ + +N W C G+ + +S W LI T C
Sbjct: 128 LWSVHRQKIICTLREHNN---W-VRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFC 183
Query: 310 GDDAIRIFKE-NPEA-------GDSDMVSFDL-VHT--EH-RAHNQDVNCVAWNPVVPGM 357
+ + +P + D+ + +D+ HT +H + H+ VN ++++P +
Sbjct: 184 EPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHL 243
Query: 358 LASCSD 363
L + SD
Sbjct: 244 LTASSD 249
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 208 (78.3 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 57/219 (26%), Positives = 99/219 (45%)
Query: 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
++SQTL H V +V ++ G +++S DK IR + + + GH+ I
Sbjct: 15 VHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGI 74
Query: 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS 160
+ A+S FI SAS D T +WD +G TL GH N V ++ + + S
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDVETGSLI--KTLIGHTNYAFCVNFNPQSNMIVSGS 132
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 220
D++V +W+V +C V+ AH V V F+ +++ S+SYD +++ D
Sbjct: 133 FDETVRIWDVTTG---KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW--DSGTG 187
Query: 221 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ + V + F G + + D T+++W
Sbjct: 188 HCVK-TLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLW 225
Score = 181 (68.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 59/223 (26%), Positives = 102/223 (45%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI-LSDGHQRTIRE 102
+TL GH + V++NPQ MI S D+ +R+W + T K + + H +
Sbjct: 107 KTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIW------DVTTGKCLKVLPAHSDPVTA 160
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSR 161
++ G+ I S+S+D +WD SG C TL EN V V +S NG+F+ +
Sbjct: 161 VDFNRDGSLIVSSSYDGLCRIWD--SGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTL 218
Query: 162 DKSVWVWEVGEEDEYEC-AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 220
D ++ +W + + +NA + + S S D+ V +++ + +
Sbjct: 219 DNTLRLWNISSAKFLKTYTGHVNAQYC-ISSAFSVTNGKRIVSGSEDNCVHMWELNSKKL 277
Query: 221 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
L+ HT TV ++A + +A+ S D TV+IW + K
Sbjct: 278 ----LQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316
Score = 142 (55.0 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 74/309 (23%), Positives = 130/309 (42%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE---GHENEVKSVTWSKN 152
H R + +S G +ASAS D T + + ++ GHEN + V +S +
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82
Query: 153 GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 212
+F+ + S DK++ +W+V + + H V F+P N++ S S+D+TV++
Sbjct: 83 ARFIVSASDDKTLKLWDV---ETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRI 139
Query: 213 F--------KEDKAEADWINFATLKSHTSTVWSLAFD---RI-----GSRLATCSDDATV 256
+ K A +D + S + S ++D RI G + T DD
Sbjct: 140 WDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENP 199
Query: 257 KI-WKEYKP-GNSAGIPTPDND-SVW-----KCVCTLSGHHGRTIYDISWCHLTD--LIA 306
+ + + P G + T DN +W K + T +GH S +T+ I
Sbjct: 200 PVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIV 259
Query: 307 TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 366
+ D+ + +++ N S L+ + H + V VA +P ++AS S D
Sbjct: 260 SGSEDNCVHMWELN---------SKKLLQ-KLEGHTETVMNVACHPT-ENLIASGSLDKT 308
Query: 367 VKLWQIKLE 375
V++W K E
Sbjct: 309 VRIWTQKKE 317
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 208 (78.3 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 66/224 (29%), Positives = 106/224 (47%)
Query: 44 QTLKGHQGRVWNVSWNP-QGTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
Q K H V++V W+ +G + G D+ +++W + GN GH+ I
Sbjct: 100 QVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDP-TVGNSLCTFR----GHESVIY 154
Query: 102 ETAWSPC--GNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSK-NGQFLA 157
T WSP G F ASAS D T +WD K +G + H+ E+ S W K N +
Sbjct: 155 STIWSPHIPGCF-ASASGDQTLRIWDVKTAG---VRIVIPAHQTEILSCDWCKYNENLVV 210
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKED 216
T + D S+ W++ + + + H +++V+F PF ++LAS SYD TV+ +
Sbjct: 211 TGAVDCSLRGWDL--RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS 268
Query: 217 KAEADWINFATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKIW 259
K + T++ HT L + + +A CS D T+KI+
Sbjct: 269 KPDP---LLETVEHHTEFTCGLDLSLQSPTEVADCSWDETIKIY 309
Score = 183 (69.5 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 66/264 (25%), Positives = 115/264 (43%)
Query: 53 VWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GN 110
+++V+W+ ++ +C D +++LW K T + H + + WS G
Sbjct: 65 LFDVTWSEDNEHVLVTCSGDGSLQLWDTA----KATGPLQVYKEHTQEVYSVDWSQTRGE 120
Query: 111 -FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWV 167
+ S S+D T VWD G C T GHE+ + S WS + G F A+ S D+++ +
Sbjct: 121 QLVVSGSWDQTVKVWDPTVGNSLC--TFRGHESVIYSTIWSPHIPGCF-ASASGDQTLRI 177
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFA 226
W+V VI AH ++ + + +N++ + + D +++ + D F
Sbjct: 178 WDVKTAG---VRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGW--DLRNVRQPVFE 232
Query: 227 TLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285
L HT + + F S LA+CS D TV+ W KP + T ++ + + C L
Sbjct: 233 LL-GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDPL--LETVEHHTEFTCGLDL 289
Query: 286 SGHHGRTIYDISWCHLTDLIATAC 309
S + D SW + C
Sbjct: 290 SLQSPTEVADCSWDETIKIYDPVC 313
>MGI|MGI:1919374 [details] [associations]
symbol:Seh1l "SEH1-like (S. cerevisiae" species:10090 "Mus
musculus" [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006999 "nuclear pore organization" evidence=ISO] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007080
"mitotic metaphase plate congression" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0031080 "nuclear pore outer
ring" evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1919374 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CH466528
GO:GO:0015031 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
OrthoDB:EOG4DJJWR ChiTaRS:SEH1L EMBL:AK011330 EMBL:AK088835
EMBL:AK143727 EMBL:AK166573 EMBL:AK169231 EMBL:AK169388
EMBL:AK170591 EMBL:BC027244 IPI:IPI00315517 IPI:IPI00406514
RefSeq:NP_001034177.1 RefSeq:NP_082388.1 UniGene:Mm.307315
ProteinModelPortal:Q8R2U0 SMR:Q8R2U0 STRING:Q8R2U0
PhosphoSite:Q8R2U0 PaxDb:Q8R2U0 PRIDE:Q8R2U0
Ensembl:ENSMUST00000025421 GeneID:72124 KEGG:mmu:72124
UCSC:uc008fmx.1 UCSC:uc008fmy.1 InParanoid:Q3UP79 NextBio:335500
Bgee:Q8R2U0 Genevestigator:Q8R2U0 Uniprot:Q8R2U0
Length = 360
Score = 177 (67.4 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 44/142 (30%), Positives = 75/142 (52%)
Query: 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190
F + H++ + V++ +G+ +ATCS D+SV VW+ E ++ C A H V
Sbjct: 2 FVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVW 61
Query: 191 KVRF-HP-FDNILASASYDDTVKLFKE------DK--AEADWINFATLKSHTSTVWSLAF 240
+V + HP F +LAS S+D T +++E DK ++ W+ TL ++V + F
Sbjct: 62 RVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKF 121
Query: 241 --DRIGSRLATCSDDATVKIWK 260
+G LATCS D V++++
Sbjct: 122 APKHMGLMLATCSADGIVRVYE 143
Score = 150 (57.9 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 54/188 (28%), Positives = 91/188 (48%)
Query: 186 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-DWINFATLKSHTSTVWSL--AFDR 242
I DV FH +A+ S D +VK++ DK+E+ DW A+ K+H+ +VW + A
Sbjct: 15 IHDVS-FDFH--GRRMATCSSDQSVKVW--DKSESGDWHCTASWKTHSGSVWRVTWAHPE 69
Query: 243 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC--H 300
G LA+CS D T +W+E ++ + S W TL ++ D+ + H
Sbjct: 70 FGQVLASCSFDRTAAVWEEIVGESNDKLR---GQSHWVKRTTLVDSR-TSVTDVKFAPKH 125
Query: 301 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP----VVPG 356
+ ++AT D +R++ E P+ ++ + L H + +C++WNP P
Sbjct: 126 MGLMLATCSADGIVRVY-EAPDV--MNLSQWSLQHEV--SCKLCCSCISWNPSSSRAHPP 180
Query: 357 MLASCSDD 364
M+A SDD
Sbjct: 181 MIAVGSDD 188
Score = 132 (51.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + +VS++ G +++C D+++++W K G+ + + H ++ W+ P
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKT--HSGSVWRVTWAHP 68
Query: 108 -CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK---------SVTWSK-----N 152
G +AS SFD T AVW++ G E N L G + VK SVT K
Sbjct: 69 EFGQVLASCSFDRTAAVWEEIVG--ESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHM 126
Query: 153 GQFLATCSRDKSVWVWE 169
G LATCS D V V+E
Sbjct: 127 GLMLATCSADGIVRVYE 143
Score = 123 (48.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 231 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290
H + ++FD G R+ATCS D +VK+W + + G+ W C + H G
Sbjct: 11 HKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGD------------WHCTASWKTHSG 58
Query: 291 RTIYDISWCH--LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD---- 344
+++ ++W H ++A+ D +++E G+S+ H R D
Sbjct: 59 -SVWRVTWAHPEFGQVLASCSFDRTAAVWEEI--VGESNDKLRGQSHWVKRTTLVDSRTS 115
Query: 345 VNCVAWNPVVPG-MLASCSDDGDVKLWQ 371
V V + P G MLA+CS DG V++++
Sbjct: 116 VTDVKFAPKHMGLMLATCSADGIVRVYE 143
Score = 92 (37.4 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 51/208 (24%), Positives = 86/208 (41%)
Query: 136 TLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGE---------EDEYECAAVINA 184
TL V V ++ G LATCS D V V+E + + E C +
Sbjct: 108 TLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRVYEAPDVMNLSQWSLQHEVSCKLCCSC 167
Query: 185 HIQDVKKVRFHPFDNILASASYDDT------VKLFKEDKAEADWINFATLKSHTSTVWSL 238
+ R HP ++A S D + V++F+ ++ + TL + T V +
Sbjct: 168 ISWNPSSSRAHP--PMIAVGSDDSSPNSMAKVQIFEYNENTRKYAKAETLMTVTDPVHDI 225
Query: 239 AF-DRIGSR---LATCSDDATVKIWKEY-KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 293
AF +G LA + D + K K S+G PT + V H+ + +
Sbjct: 226 AFAPNLGRSFHILAVATKDVRIFTLKPLRKELTSSGGPTKFEIHI---VAQFDNHNSQ-V 281
Query: 294 YDISWCHLTDLIATACGDDA-IRIFKEN 320
+ +SW ++T + + GDD +R++K N
Sbjct: 282 WRVSW-NITGTVLASSGDDGCVRLWKAN 308
Score = 77 (32.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285
A +H S VW ++++ G+ LA+ DD V++WK N DN WKC L
Sbjct: 272 AQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWK----ANYM-----DN---WKCTGIL 319
Query: 286 SGH 288
G+
Sbjct: 320 KGN 322
Score = 76 (31.8 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 304 LIATACGDDAIRIFKENP---EAGDSD-MVSFDL-VHTEHRAHNQDVNCVAWNPVVPGML 358
++A A D +RIF P E S F++ + + HN V V+WN + +L
Sbjct: 237 ILAVATKD--VRIFTLKPLRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWN-ITGTVL 293
Query: 359 ASCSDDGDVKLWQ 371
AS DDG V+LW+
Sbjct: 294 ASSGDDGCVRLWK 306
Score = 76 (31.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 47 KGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLW 77
K H G VW V+W +P+ G +++SC D+ +W
Sbjct: 54 KTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVW 86
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 216 (81.1 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 68/242 (28%), Positives = 110/242 (45%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH V ++ G+++ + D +R+W ES G A L GH +R
Sbjct: 333 TLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVES-GRHL---ATLH-GHHAAVRCVQ 385
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+ G + S +D T +W+ +G+ C TL GH N V S+ + + + S D S
Sbjct: 386 FD--GTTVVSGGYDFTVKIWNAHTGR--CIRTLTGHNNRVYSLLFESERSIVCSGSLDTS 441
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+ VW+ + EC A++ H ++ NIL S + D V+++ D E ++
Sbjct: 442 IRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVW--DIHEGTCVH 497
Query: 225 FATLKSHTSTVWSLA-FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
L H S + SL F R + +AT SDD TVK+W + + T D+ C+
Sbjct: 498 M--LSGHRSAITSLQWFGR--NMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCIW 553
Query: 284 TL 285
L
Sbjct: 554 RL 555
Score = 198 (74.8 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 81/321 (25%), Positives = 138/321 (42%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
++ S L+GH+ V +++ +D +++W + +T GH
Sbjct: 245 IMGSAVLRGHEDHVITCMQIHDDVLVTG-SDDNTLKVWCIDKGEVMYTLV-----GHTGG 298
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
+ + S CG +I S S D T VW G TL+GH + V+ + + G L T
Sbjct: 299 VWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLL--HTLQGHTSTVRCMAMA--GSILVTG 354
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRD ++ VW+V E + A ++ H V+ V+F + S YD TVK++
Sbjct: 355 SRDTTLRVWDV-ESGRH--LATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGR 409
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP----------GNSA- 268
TL H + V+SL F+ S + + S D ++++W +P G+++
Sbjct: 410 C----IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSL 465
Query: 269 --GIPTPDN-------DS---VWK-----CVCTLSGHHGRTIYDISWCHLTDLIATACGD 311
G+ N DS VW CV LSGH I + W +++AT+ D
Sbjct: 466 TSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRS-AITSLQWFG-RNMVATSSDD 523
Query: 312 DAIRIFKENPEAGDSDMVSFD 332
++++ A D+V+ D
Sbjct: 524 GTVKLWDIERGALIRDLVTLD 544
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 75/309 (24%), Positives = 126/309 (40%)
Query: 84 NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE 143
N A+L GH+ + T + + + S D T VW G E TL GH
Sbjct: 243 NPIMGSAVLR-GHEDHVI-TCMQIHDDVLVTGSDDNTLKVWCIDKG--EVMYTLVGHTGG 298
Query: 144 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203
V + S+ G+++ + S D++V VW + + H V+ + +IL +
Sbjct: 299 VWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLH---TLQGHTSTVRCMAMA--GSILVT 353
Query: 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
S D T++++ + + ATL H + V + FD G+ + + D TVKIW +
Sbjct: 354 GSRDTTLRVWDVESGR----HLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHT 407
Query: 264 PGNSAGIPTPDNDSVWKC--------VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 315
G T N+ V+ VC+ S ++D + + +A G ++
Sbjct: 408 -GRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLT 466
Query: 316 I---FKENPEAG---DSDMVSFDL-----VHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 364
+ N DS + +D+ VH H + + W M+A+ SDD
Sbjct: 467 SGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLS-GHRSAITSLQW--FGRNMVATSSDD 523
Query: 365 GDVKLWQIK 373
G VKLW I+
Sbjct: 524 GTVKLWDIE 532
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 216 (81.1 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 68/242 (28%), Positives = 110/242 (45%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH V ++ G+++ + D +R+W ES G A L GH +R
Sbjct: 333 TLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVES-GRHL---ATLH-GHHAAVRCVQ 385
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
+ G + S +D T +W+ +G+ C TL GH N V S+ + + + S D S
Sbjct: 386 FD--GTTVVSGGYDFTVKIWNAHTGR--CIRTLTGHNNRVYSLLFESERSIVCSGSLDTS 441
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+ VW+ + EC A++ H ++ NIL S + D V+++ D E ++
Sbjct: 442 IRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVW--DIHEGTCVH 497
Query: 225 FATLKSHTSTVWSLA-FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
L H S + SL F R + +AT SDD TVK+W + + T D+ C+
Sbjct: 498 M--LSGHRSAITSLQWFGR--NMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCIW 553
Query: 284 TL 285
L
Sbjct: 554 RL 555
Score = 198 (74.8 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 81/321 (25%), Positives = 138/321 (42%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
++ S L+GH+ V +++ +D +++W + +T GH
Sbjct: 245 IMGSAVLRGHEDHVITCMQIHDDVLVTG-SDDNTLKVWCIDKGEVMYTLV-----GHTGG 298
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
+ + S CG +I S S D T VW G TL+GH + V+ + + G L T
Sbjct: 299 VWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLL--HTLQGHTSTVRCMAMA--GSILVTG 354
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRD ++ VW+V E + A ++ H V+ V+F + S YD TVK++
Sbjct: 355 SRDTTLRVWDV-ESGRH--LATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGR 409
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP----------GNSA- 268
TL H + V+SL F+ S + + S D ++++W +P G+++
Sbjct: 410 C----IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSL 465
Query: 269 --GIPTPDN-------DS---VWK-----CVCTLSGHHGRTIYDISWCHLTDLIATACGD 311
G+ N DS VW CV LSGH I + W +++AT+ D
Sbjct: 466 TSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRS-AITSLQWFG-RNMVATSSDD 523
Query: 312 DAIRIFKENPEAGDSDMVSFD 332
++++ A D+V+ D
Sbjct: 524 GTVKLWDIERGALIRDLVTLD 544
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 75/309 (24%), Positives = 126/309 (40%)
Query: 84 NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE 143
N A+L GH+ + T + + + S D T VW G E TL GH
Sbjct: 243 NPIMGSAVLR-GHEDHVI-TCMQIHDDVLVTGSDDNTLKVWCIDKG--EVMYTLVGHTGG 298
Query: 144 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203
V + S+ G+++ + S D++V VW + + H V+ + +IL +
Sbjct: 299 VWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLH---TLQGHTSTVRCMAMA--GSILVT 353
Query: 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
S D T++++ + + ATL H + V + FD G+ + + D TVKIW +
Sbjct: 354 GSRDTTLRVWDVESGR----HLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHT 407
Query: 264 PGNSAGIPTPDNDSVWKC--------VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 315
G T N+ V+ VC+ S ++D + + +A G ++
Sbjct: 408 -GRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLT 466
Query: 316 I---FKENPEAG---DSDMVSFDL-----VHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 364
+ N DS + +D+ VH H + + W M+A+ SDD
Sbjct: 467 SGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLS-GHRSAITSLQW--FGRNMVATSSDD 523
Query: 365 GDVKLWQIK 373
G VKLW I+
Sbjct: 524 GTVKLWDIE 532
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 207 (77.9 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 66/225 (29%), Positives = 106/225 (47%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGE-DKNIRLWGK-ESFGNKFTAKAILSDGH 96
+++ TL+GH G V ++S P+ I G DK+I LW N A+ L+ GH
Sbjct: 4 QLVLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLT-GH 62
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
+ + A S ++ SAS+D T +WD G EC GH ++V SV+ S + + +
Sbjct: 63 SHFVSDCALSFDSHYALSASWDKTIRLWDLEKG--ECTHQFVGHTSDVLSVSISPDNRQV 120
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNI-LASASYDDTVKLFK 214
+ SRDK++ +W + +Y H V VRF P DN+ SA +D VK++
Sbjct: 121 VSGSRDKTIKIWNIIGNCKYTITD--GGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWD 178
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ ++ HT V ++ GS A+ D T+ +W
Sbjct: 179 LETFSLRTSHYG----HTGYVSAVTISPDGSLCASGGRDGTLMLW 219
Score = 160 (61.4 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 58/226 (25%), Positives = 97/226 (42%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGN-KFTAKAILSDGHQRTIRETAWS 106
GH V +VS +P + S DK I++W GN K+T I GH + +S
Sbjct: 103 GHTSDVLSVSISPDNRQVVSGSRDKTIKIWN--IIGNCKYT---ITDGGHSDWVSCVRFS 157
Query: 107 PCGNFIA--SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
P + + SA +D VWD + F + GH V +VT S +G A+ RD +
Sbjct: 158 PNPDNLTFVSAGWDKAVKVWDLET--FSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGT 215
Query: 165 VWVWEVGEEDE-YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF------KEDK 217
+ +W++ E Y A N + + F P L +A+ ++++F K D+
Sbjct: 216 LMLWDLNESTHLYSLEAKAN-----INALVFSPNRYWLCAAT-GSSIRIFDLETQEKVDE 269
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263
D++ S + SL + G L + D +++W+ K
Sbjct: 270 LTVDFVGVGKKSSEPECI-SLTWSPDGQTLFSGWTDNLIRVWQVTK 314
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 214 (80.4 bits), Expect = 8.3e-15, P = 8.3e-15
Identities = 93/366 (25%), Positives = 162/366 (44%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ +L+GH V +V+++P G ++S D +R W + +FTAK GH+ +
Sbjct: 120 TSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAK-----GHRHWVLS 174
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK---NGQ--FLA 157
AWSP G +AS ++ +WD +G + L GH + + W N + +LA
Sbjct: 175 IAWSPDGKKLASGCKNSQIFLWDPATGN-QIGRVLTGHSKWITCLCWEPLHINPECRYLA 233
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK-ED 216
+ S+D S+ +W+ C ++ H Q V V++ D +L S+S D T+K+++ +D
Sbjct: 234 SASKDGSIRIWDTLMG---RCDKILTGHTQSVTCVKWGG-DGLLYSSSQDRTIKVWRSQD 289
Query: 217 -------KAEADWINFATLKSHTSTVWSLAF----------DRIGSRLATCSDDATVKIW 259
+ A W+N L S + + AF D GS LA D A +
Sbjct: 290 GILCRTLQGHAHWVNTMAL-STDYVLRTGAFEPAEATINPQDMSGS-LAELKDKAQQRYD 347
Query: 260 KEYKPGNSAGIPTPDNDSV--W------KCVCTLSGHHGRTIYDISWCHLTDLIATACGD 311
K G + D+ ++ W K + ++GH I + + T +IA+A D
Sbjct: 348 KVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQA-LINQVLFSPDTRIIASASFD 406
Query: 312 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371
+I++++ G + L R H V +AW+ +L S S D +K+W
Sbjct: 407 KSIKLWE-----GRTGKYLTSL-----RGHVSAVYQIAWS-ADSRLLVSGSSDSTLKVWD 455
Query: 372 IKLENL 377
+ + L
Sbjct: 456 AETKKL 461
Score = 173 (66.0 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 39/125 (31%), Positives = 65/125 (52%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+ + GHQ + V ++P +I+S DK+I+LW + G T+ GH + +
Sbjct: 379 ERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRT-GKYLTSLR----GHVSAVYQI 433
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWS + S S D+T VWD + + + L GH +EV + WS +GQ +A+ +DK
Sbjct: 434 AWSADSRLLVSGSSDSTLKVWDAETKKLAID--LPGHADEVFATDWSPDGQRVASGGKDK 491
Query: 164 SVWVW 168
+ +W
Sbjct: 492 CLRIW 496
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 34/120 (28%), Positives = 62/120 (51%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GHQ I + +SP IASASFD + +W+ R+G++ +L GH + V + WS + +
Sbjct: 383 GHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYL--TSLRGHVSAVYQIAWSADSR 440
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
L + S D ++ VW+ + + A + H +V + P +AS D +++++
Sbjct: 441 LLVSGSSDSTLKVWDA---ETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIWR 497
Score = 127 (49.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 37/149 (24%), Positives = 70/149 (46%)
Query: 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171
+ S S D T +W + + GH+ + V +S + + +A+ S DKS+ +WE G
Sbjct: 357 LVSGSDDFTLFLWRPAEDKKPLER-MTGHQALINQVLFSPDTRIIASASFDKSIKLWE-G 414
Query: 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 231
+Y + + H+ V ++ + +L S S D T+K++ AE + L H
Sbjct: 415 RTGKYLTS--LRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWD---AETKKLAI-DLPGH 468
Query: 232 TSTVWSLAFDRIGSRLATCSDDATVKIWK 260
V++ + G R+A+ D ++IW+
Sbjct: 469 ADEVFATDWSPDGQRVASGGKDKCLRIWR 497
Score = 117 (46.2 bits), Expect = 0.00065, P = 0.00065
Identities = 44/155 (28%), Positives = 68/155 (43%)
Query: 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKV 192
C ++LEGH V SV +S G++LA+ S D +V W++ E A H V +
Sbjct: 119 CTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTA---KGHRHWVLSI 175
Query: 193 RFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR-----L 247
+ P LAS + + L+ D A + I L H+ + L ++ + L
Sbjct: 176 AWSPDGKKLASGCKNSQIFLW--DPATGNQIG-RVLTGHSKWITCLCWEPLHINPECRYL 232
Query: 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282
A+ S D +++IW G I T SV CV
Sbjct: 233 ASASKDGSIRIWDTLM-GRCDKILTGHTQSV-TCV 265
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 211 (79.3 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 63/231 (27%), Positives = 114/231 (49%)
Query: 37 RCEMINS--QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
RC + + L GH+G V+ ++P G+ ++S G D+ I LW + + A L
Sbjct: 51 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY---ATLK- 106
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG- 153
GH + E ++ G+ + SAS D T AVWD +G E L+GH + V S ++ G
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGP 164
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
Q + T S D +V +W++ ++ + N + V V F+ + + S D+ +K++
Sbjct: 165 QLVCTGSDDGTVKLWDIRKKAAIQTFQ--NTY--QVLAVTFNDTSDQIISGGIDNDIKVW 220
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
+ + + T++ H +V L+ GS L + + D TV++W + +P
Sbjct: 221 DLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW-DVRP 266
Score = 145 (56.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 56/243 (23%), Positives = 102/243 (41%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N TLKGH G V + +N G+M+ S DK + +W E+ G + K + GH +
Sbjct: 101 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GER--VKRL--KGHTSFVN 155
Query: 102 ETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHEN--EVKSVTWSKNGQFLAT 158
+ G + + S D T +WD R A ++ +N +V +VT++ + +
Sbjct: 156 SCYPARRGPQLVCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 210
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK---- 214
D + VW++ + + + H V + + L S + D+TV+++
Sbjct: 211 GGIDNDIKVWDLRQN---KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 267
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE------YK-PGNS 267
K I + + + ++ GS++A S D V +W YK PG++
Sbjct: 268 APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 327
Query: 268 AGI 270
I
Sbjct: 328 GSI 330
Score = 135 (52.6 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 41/156 (26%), Positives = 70/156 (44%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
+V V++N I S G D +I++W NK T GH ++ + S G++
Sbjct: 195 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQ--NKLT---YTMRGHADSVTGLSLSSEGSY 249
Query: 112 IASASFDATTAVWDKR--SGQFECNATLEGH----ENEVKSVTWSKNGQFLATCSRDKSV 165
+ S + D T VWD R + + C +G+ E + +WS +G +A S D+ V
Sbjct: 250 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 309
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201
+VW+ + H + +V FHP + I+
Sbjct: 310 YVWDTTSR---RILYKLPGHAGSINEVAFHPDEPII 342
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 210 (79.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 66/232 (28%), Positives = 114/232 (49%)
Query: 37 RCEMINS--QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
RC + + L GH+G V+ ++P G ++S G D+ I LW + + A L
Sbjct: 78 RCSSLQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNY---ATLK- 133
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG- 153
GH + E ++ G+ + SAS D T AVWD +G E L+GH + V S ++ G
Sbjct: 134 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRGP 191
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASYDDTVKL 212
Q + T S D +V +W++ ++ AAV + V V F+ + + S D+ +K+
Sbjct: 192 QLVCTGSDDGTVKLWDIRKK-----AAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 246
Query: 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
+ + + + T++ H +V L+ GS L + + D TV+IW + +P
Sbjct: 247 WDLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIW-DVRP 293
Score = 145 (56.1 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 44/162 (27%), Positives = 74/162 (45%)
Query: 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111
+V V++N I S G D +I++W NK T GH ++ + S G++
Sbjct: 222 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQ--NKLT---YTMRGHADSVTGLSLSSEGSY 276
Query: 112 IASASFDATTAVWDKR--SGQFECNATLEGH----ENEVKSVTWSKNGQFLATCSRDKSV 165
+ S + D T +WD R + + C +G+ E + +WS +G +A S D+ V
Sbjct: 277 LLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFV 336
Query: 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207
+VW+ + H V ++ FHP + I+ SAS D
Sbjct: 337 YVWDTTSR---RILYKLPGHAGSVNELAFHPEEPIILSASSD 375
Score = 142 (55.0 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 51/225 (22%), Positives = 95/225 (42%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
N TLKGH G V + +N G+M+ S DK + +W E+ G + K + GH +
Sbjct: 128 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GER--VKRL--KGHTSFVN 182
Query: 102 ETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHEN--EVKSVTWSKNGQFLAT 158
+ G + + S D T +WD R A ++ +N +V +VT++ + +
Sbjct: 183 SCYPARRGPQLVCTGSDDGTVKLWDIRK-----KAAVQTFQNTYQVLAVTFNDTSDQIIS 237
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK---- 214
D + VW++ + + + H V + + L S + D+TV+++
Sbjct: 238 GGIDNDIKVWDLRQN---KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPF 294
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
K I + + + ++ GS++A S D V +W
Sbjct: 295 APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVW 339
Score = 134 (52.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 34/129 (26%), Positives = 57/129 (44%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG-H--QRTIR 101
T++GH V +S + +G+ + S D +R+W F K I H ++ +
Sbjct: 257 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLL 316
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+WSP G+ IA S D VWD S + L GH V + + + + S
Sbjct: 317 RCSWSPDGSKIAGGSADRFVYVWDTTSRRILYK--LPGHAGSVNELAFHPEEPIILSASS 374
Query: 162 DKSVWVWEV 170
DK +++ E+
Sbjct: 375 DKRLYMGEI 383
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 198 (74.8 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 86/354 (24%), Positives = 153/354 (43%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T +GH+ V ++SW+P G ++S ++ I LW + K +A+ GH + I +
Sbjct: 152 TCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPST--GKQVGRALT--GHSKWITALS 207
Query: 105 WSPC-GN----FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
W P N ++AS+S D + VWD +G+ C TL GH V + W +G L +
Sbjct: 208 WEPLHANPECRYVASSSKDGSVRVWDTTAGR--CERTLTGHAQSVTCLRWGGDG-LLYSA 264
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
S+D+++ VW D C + H V + D L + +++
Sbjct: 265 SQDRTIKVWRA--HDGVLCRT-LQGHGHWVNTMALST-DYALRTGAFEPAEASVNAQDLR 320
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW---KEYKP-----GNSAGIP 271
+ LK + ++L + RL + SDD T+ +W ++ KP G+ A I
Sbjct: 321 G---SLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALIN 377
Query: 272 ----TPDND-----SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322
+PD+ S K + G G+ + + H+ + A D+ R+
Sbjct: 378 QVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRG-HVAAVYQIAWSADS-RLLVSG-- 433
Query: 323 AGDSDMVSFDL----VHTEHRAHNQDVNCVAWNPVVPGM-LASCSDDGDVKLWQ 371
+ DS + +D+ + T+ H +V V W+P G +AS D +++W+
Sbjct: 434 SSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSP--DGQRVASGGKDKCLRIWR 485
Score = 197 (74.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 55/202 (27%), Positives = 98/202 (48%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ +L+GH V +V+++P G ++S D +R W + FT + GH+ +
Sbjct: 108 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQ-----GHRHWVLS 162
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK---NGQ--FLA 157
+WSP G +AS + +WD +G+ + L GH + +++W N + ++A
Sbjct: 163 ISWSPDGKKLASGCKNGQILLWDPSTGK-QVGRALTGHSKWITALSWEPLHANPECRYVA 221
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217
+ S+D SV VW+ C + H Q V +R+ D +L SAS D T+K+++
Sbjct: 222 SSSKDGSVRVWDTTAG---RCERTLTGHAQSVTCLRWGG-DGLLYSASQDRTIKVWRAH- 276
Query: 218 AEADWINFATLKSHTSTVWSLA 239
D + TL+ H V ++A
Sbjct: 277 ---DGVLCRTLQGHGHWVNTMA 295
Score = 166 (63.5 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 45/176 (25%), Positives = 83/176 (47%)
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWD--KRSGQFECNATLEGHENEVKSVTWSK 151
+GH + A+SP G ++AS S D T WD + F C +GH + V S++WS
Sbjct: 112 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----QGHRHWVLSISWSP 167
Query: 152 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-----NILASASY 206
+G+ LA+ ++ + +W+ + A + H + + + + P +AS+S
Sbjct: 168 DGKKLASGCKNGQILLWDPSTGKQVGRA--LTGHSKWITALSWEPLHANPECRYVASSSK 225
Query: 207 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262
D +V+++ + TL H +V L + G L + S D T+K+W+ +
Sbjct: 226 DGSVRVWDTTAGRCE----RTLTGHAQSVTCLRWGGDGL-LYSASQDRTIKVWRAH 276
Score = 116 (45.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 35/133 (26%), Positives = 65/133 (48%)
Query: 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED-EYECAAVINAHIQDVKK 191
C ++LEGH V SV +S G++LA+ S D +V W++ E + C H V
Sbjct: 107 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----QGHRHWVLS 162
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR----- 246
+ + P LAS + + L+ D + + A L H+ + +L+++ + +
Sbjct: 163 ISWSPDGKKLASGCKNGQILLW--DPSTGKQVGRA-LTGHSKWITALSWEPLHANPECRY 219
Query: 247 LATCSDDATVKIW 259
+A+ S D +V++W
Sbjct: 220 VASSSKDGSVRVW 232
Score = 57 (25.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377
R H V +AW+ +L S S D +K+W +K + L
Sbjct: 412 RGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKL 449
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 60/246 (24%), Positives = 110/246 (44%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI-LSDGHQRTIRETA 104
+K H+ V +++ I++C DK +++W N T + + D H +
Sbjct: 661 IKAHEDEVLCCAFSTDDRFIATCSVDKKVKIW------NSMTGGLVHVYDEHSEQVNCCH 714
Query: 105 WSPCGNFI--ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
++ +++ A+AS D +WD Q EC T+ GH N V +S + + LA+CS D
Sbjct: 715 FTNNSHYLLLATASSDCFLKLWDLN--QKECRNTMFGHTNSVNHCRFSPDDKLLASCSAD 772
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD-DTVKLFKEDKAEAD 221
++ +W+V +E + V + + + I+ S+ D ++ K +
Sbjct: 773 GTLKLWDVKSANERKSINVKQFFLNSEEPQE--DMEVIVKCCSWSADGTRIMVAAKNKIF 830
Query: 222 -W-----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP-GNSAGIPTPD 274
W + A + H S V + F GS T SDD T+++W+ K NSA + +
Sbjct: 831 LWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLKQE 890
Query: 275 NDSVWK 280
D V++
Sbjct: 891 IDVVFQ 896
Score = 178 (67.7 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 51/182 (28%), Positives = 85/182 (46%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++ H V++ ++ G I+SCG DK ++++ E+ KA H+ + A+
Sbjct: 619 VRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKA-----HEDEVLCCAF 673
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL--ATCSRDK 163
S FIA+ S D +W+ +G + H +V ++ N +L AT S D
Sbjct: 674 STDDRFIATCSVDKKVKIWNSMTGGLV--HVYDEHSEQVNCCHFTNNSHYLLLATASSDC 731
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA-EADW 222
+ +W++ ++ EC + H V RF P D +LAS S D T+KL+ A E
Sbjct: 732 FLKLWDLNQK---ECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKS 788
Query: 223 IN 224
IN
Sbjct: 789 IN 790
Score = 125 (49.1 bits), Expect = 0.00027, P = 0.00027
Identities = 51/205 (24%), Positives = 85/205 (41%)
Query: 59 NPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 118
+P I+ GED + + E N+ I GH++T+R ++ G + S+S D
Sbjct: 935 SPHLQYIAFGGEDGAVEIL--ELLNNRIFQSRI---GHKKTVRHIQFTDDGKTLISSSDD 989
Query: 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD---KSVWVWEVGE-ED 174
++ VW+ +S ++ L+ H+ VK KN + L+ S D K +W G E
Sbjct: 990 SSIQVWNWQSEEY---VFLQAHQETVKDFKLLKNSKLLSW-SFDGTVKKIWSIITGRIEK 1045
Query: 175 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 234
++ C H V P +S S D T K++ + L+ H
Sbjct: 1046 DFVC------HQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSP----LHELRGHKGC 1095
Query: 235 VWSLAFDRIGSRLATCSDDATVKIW 259
V F + LAT D+ ++IW
Sbjct: 1096 VRCSVFSVDSTLLATGDDNGEIRIW 1120
Score = 96 (38.9 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 30/109 (27%), Positives = 44/109 (40%)
Query: 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240
V+ H V F +AS D T+++FK + E +K+H V AF
Sbjct: 618 VVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGE----KLLEIKAHEDEVLCCAF 673
Query: 241 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289
+ATCS D VKIW G + ++ V C T + H+
Sbjct: 674 STDDRFIATCSVDKKVKIWNSMT-GGLVHVYDEHSEQVNCCHFTNNSHY 721
Score = 92 (37.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 34/135 (25%), Positives = 60/135 (44%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK--FTAKAIL--SDGHQRT- 99
T+ GH V + ++P +++SC D ++LW +S + K S+ Q
Sbjct: 746 TMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDM 805
Query: 100 ---IRETAWSPCGNFIASASFDATTAVWDKRSGQFECN--ATLEGHENEVKSVTWSKNGQ 154
++ +WS G I A+ + +W+ S C A GH + V V +S +G
Sbjct: 806 EVIVKCCSWSADGTRIMVAAKNKIF-LWNMDS----CLKVADCRGHLSWVHCVMFSPDGS 860
Query: 155 FLATCSRDKSVWVWE 169
T S D+++ +WE
Sbjct: 861 SFLTSSDDQTIRLWE 875
Score = 90 (36.7 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 42/165 (25%), Positives = 71/165 (43%)
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW----KEYKPGNSAGIPTPDNDSVWK 280
F + H TV + F G L + SDD+++++W +EY A T + + K
Sbjct: 961 FQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYV-FLQAHQETVKDFKLLK 1019
Query: 281 CVCTLSGHHGRTIYDISWCHLTDLIAT--ACGDDAIRIFKENPEAG-----DSDMV---- 329
LS T+ I W +T I C D + +P+A +D
Sbjct: 1020 NSKLLSWSFDGTVKKI-WSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1078
Query: 330 SFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
SF+L+ H R H V C ++ V +LA+ D+G++++W +
Sbjct: 1079 SFELLSPLHELRGHKGCVRCSVFS-VDSTLLATGDDNGEIRIWNV 1122
Score = 82 (33.9 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 296 ISWCHLTD-----LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350
++ CH T+ L+ATA D ++++ N + + M H VN +
Sbjct: 710 VNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFG----------HTNSVNHCRF 759
Query: 351 NPVVPGMLASCSDDGDVKLWQIKLEN 376
+P +LASCS DG +KLW +K N
Sbjct: 760 SPD-DKLLASCSADGTLKLWDVKSAN 784
Score = 63 (27.2 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
R H V+CV ++P L S SDD ++LW+ K
Sbjct: 844 RGHLSWVHCVMFSPDGSSFLTS-SDDQTIRLWETK 877
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 206 (77.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 67/224 (29%), Positives = 105/224 (46%)
Query: 44 QTLKGHQGRVWNVSWNP--QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
Q K H V++V W+ ++ S D+ +++W + GN GH+ I
Sbjct: 100 QVYKEHTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWDP-TVGNSLCTFR----GHESVIY 154
Query: 102 ETAWSPC--GNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWSK-NGQFLA 157
T WSP G F ASAS D T +WD K +G + H+ E+ S W K N L
Sbjct: 155 STIWSPHIPGCF-ASASGDQTLRIWDVKTTG---VRIVIPAHQAEILSCDWCKYNENLLV 210
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKED 216
T + D S+ W++ + + + H +++V+F PF ++LAS SYD TV+ +
Sbjct: 211 TGAVDCSLRGWDL--RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS 268
Query: 217 KAEADWINFATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKIW 259
K + T++ HT L + + +A CS D TVKI+
Sbjct: 269 KPDP---LLETVEHHTEFTCGLDLSLQSPTEVADCSWDETVKIY 309
Score = 187 (70.9 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 66/264 (25%), Positives = 115/264 (43%)
Query: 53 VWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN- 110
+++V+W+ ++ +C D +++LW K T + H + + WS +
Sbjct: 65 LFDVTWSENNEHVLVTCSGDGSLQLWDTA----KATGPLQVYKEHTQEVYSVDWSQTRDE 120
Query: 111 -FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWV 167
+ S S+D T VWD G C T GHE+ + S WS + G F A+ S D+++ +
Sbjct: 121 QLVVSGSWDQTVKVWDPTVGNSLC--TFRGHESVIYSTIWSPHIPGCF-ASASGDQTLRI 177
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFA 226
W+V VI AH ++ + + +N+L + + D +++ + D F
Sbjct: 178 WDVKTTG---VRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGW--DLRNVRQPVFE 232
Query: 227 TLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285
L HT + + F S LA+CS D TV+ W KP + T ++ + + C L
Sbjct: 233 LL-GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDPL--LETVEHHTEFTCGLDL 289
Query: 286 SGHHGRTIYDISWCHLTDLIATAC 309
S + D SW + C
Sbjct: 290 SLQSPTEVADCSWDETVKIYNPVC 313
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 178 (67.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 51/182 (28%), Positives = 85/182 (46%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++ H V++ ++ G I+SCG DK ++++ E+ KA H+ + A+
Sbjct: 619 VRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKA-----HEDEVLCCAF 673
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL--ATCSRDK 163
S FIA+ S D +W+ +G + H +V ++ N +L AT S D
Sbjct: 674 STDDRFIATCSVDKKVKIWNSMTGGLV--HVYDEHSEQVNCCHFTNNSHYLLLATASSDC 731
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA-EADW 222
+ +W++ ++ EC + H V RF P D +LAS S D T+KL+ A E
Sbjct: 732 FLKLWDLNQK---ECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKS 788
Query: 223 IN 224
IN
Sbjct: 789 IN 790
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 54/234 (23%), Positives = 100/234 (42%)
Query: 59 NPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 118
N ++++ D ++LW K + GH ++ +SP +AS S D
Sbjct: 718 NSHYLLLATASSDCFLKLW---DLNQKECRNTMF--GHTNSVNHCRFSPDDKLLASCSAD 772
Query: 119 ATTAVWDKRSG---------QFECNATLEGHENEV--KSVTWSKNGQFLATCSRDKSVWV 167
T +WD +S QF N+ + EV K +WS +G + +++K +++
Sbjct: 773 GTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNK-IFL 831
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 227
+++ A + H ++ F P +++ A V+L+ D + A
Sbjct: 832 FDIHTGGLL--AEIHTGHHSTIQYCDFSPQNHLAVVALSQCCVELWNMDSC----LKVAD 885
Query: 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP-GNSAGIPTPDNDSVWK 280
+ H S V + F GS T SDD T+++W+ K NSA + + D V++
Sbjct: 886 CRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLKQEIDVVFQ 939
Score = 125 (49.1 bits), Expect = 0.00028, P = 0.00028
Identities = 51/205 (24%), Positives = 85/205 (41%)
Query: 59 NPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 118
+P I+ GED + + E N+ I GH++T+R ++ G + S+S D
Sbjct: 978 SPHLQYIAFGGEDGAVEIL--ELLNNRIFQSRI---GHKKTVRHIQFTDDGKTLISSSDD 1032
Query: 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD---KSVWVWEVGE-ED 174
++ VW+ +S ++ L+ H+ VK KN + L+ S D K +W G E
Sbjct: 1033 SSIQVWNWQSEEY---VFLQAHQETVKDFKLLKNSKLLSW-SFDGTVKKIWSIITGRIEK 1088
Query: 175 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 234
++ C H V P +S S D T K++ + L+ H
Sbjct: 1089 DFVC------HQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSP----LHELRGHKGC 1138
Query: 235 VWSLAFDRIGSRLATCSDDATVKIW 259
V F + LAT D+ ++IW
Sbjct: 1139 VRCSVFSVDSTLLATGDDNGEIRIW 1163
Score = 96 (38.9 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 30/109 (27%), Positives = 44/109 (40%)
Query: 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240
V+ H V F +AS D T+++FK + E +K+H V AF
Sbjct: 618 VVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGE----KLLEIKAHEDEVLCCAF 673
Query: 241 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289
+ATCS D VKIW G + ++ V C T + H+
Sbjct: 674 STDDRFIATCSVDKKVKIWNSMT-GGLVHVYDEHSEQVNCCHFTNNSHY 721
Score = 90 (36.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 42/165 (25%), Positives = 71/165 (43%)
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW----KEYKPGNSAGIPTPDNDSVWK 280
F + H TV + F G L + SDD+++++W +EY A T + + K
Sbjct: 1004 FQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYV-FLQAHQETVKDFKLLK 1062
Query: 281 CVCTLSGHHGRTIYDISWCHLTDLIAT--ACGDDAIRIFKENPEAG-----DSDMV---- 329
LS T+ I W +T I C D + +P+A +D
Sbjct: 1063 NSKLLSWSFDGTVKKI-WSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1121
Query: 330 SFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
SF+L+ H R H V C ++ V +LA+ D+G++++W +
Sbjct: 1122 SFELLSPLHELRGHKGCVRCSVFS-VDSTLLATGDDNGEIRIWNV 1165
Score = 89 (36.4 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 38/181 (20%), Positives = 72/181 (39%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK--FTAKAIL--SDGHQRT- 99
T+ GH V + ++P +++SC D ++LW +S + K S+ Q
Sbjct: 746 TMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDM 805
Query: 100 ---IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
++ +WS G I A+ + ++D +G GH + ++ +S
Sbjct: 806 EVIVKCCSWSADGTRIMVAAKNKIF-LFDIHTGGLLAEIHT-GHHSTIQYCDFSPQNHLA 863
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
V +W + D A H+ V V F P + ++S D T++L++
Sbjct: 864 VVALSQCCVELWNM---DSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETK 920
Query: 217 K 217
K
Sbjct: 921 K 921
Score = 82 (33.9 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 296 ISWCHLTD-----LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350
++ CH T+ L+ATA D ++++ N + + M H VN +
Sbjct: 710 VNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFG----------HTNSVNHCRF 759
Query: 351 NPVVPGMLASCSDDGDVKLWQIKLEN 376
+P +LASCS DG +KLW +K N
Sbjct: 760 SPD-DKLLASCSADGTLKLWDVKSAN 784
Score = 63 (27.2 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
R H V+CV ++P L S SDD ++LW+ K
Sbjct: 887 RGHLSWVHCVMFSPDGSSFLTS-SDDQTIRLWETK 920
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 206 (77.6 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 73/279 (26%), Positives = 129/279 (46%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
LKGH V +V+ + G I+S D + LW S G+K K +LS G + +
Sbjct: 81 LKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARS-GDK---KHLLSFGPV-DLWTVQF 135
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK-SVTWSKNGQFLATCSRDKS 164
SPC ++ S D +++ +G+ E TL+ + S+ +S +G+++A+ + D
Sbjct: 136 SPCNKYVISGLNDGKISMYSVETGKAE--QTLDAQNGKYTLSIAYSPDGKYIASGAIDGI 193
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
+ +++V + + H V+ + F P +L +AS D +KL+ D +D +
Sbjct: 194 ITIFDVAAG---KVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLY--DVTHSDVVG 248
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 284
TL H S V +AF G A+ S D +VKIW + S KC+ T
Sbjct: 249 --TLSGHASWVLCVAFSEDGKHFASSSSDNSVKIW---------------DTSERKCLHT 291
Query: 285 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 323
+ H + ++ + + D +A+A D ++ I+ P A
Sbjct: 292 FAEHTDQ-VWGVRYSPGNDKVASASEDKSLNIYYCPPNA 329
Score = 160 (61.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 46/172 (26%), Positives = 83/172 (48%)
Query: 44 QTLKGHQGR-VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIR 101
QTL G+ +++++P G I+S D I ++ + K + + +GH +R
Sbjct: 163 QTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAA------GKVVQTLEGHAMPVR 216
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+SP + +AS D ++D + TL GH + V V +S++G+ A+ S
Sbjct: 217 SLCFSPNSQLLLTASDDGHMKLYDVTHS--DVVGTLSGHASWVLCVAFSEDGKHFASSSS 274
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
D SV +W+ E +C H V VR+ P ++ +ASAS D ++ ++
Sbjct: 275 DNSVKIWDTSER---KCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 56/232 (24%), Positives = 96/232 (41%)
Query: 60 PQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 119
P+ +++ G D +++W + N + L GH + A S G IAS+S D+
Sbjct: 51 PKDFLVTG-GLDDLVKVWDLQE-DNTLKLRHKLK-GHALGVVSVAVSSDGQTIASSSLDS 107
Query: 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179
T +WD RSG + L ++ +V +S +++ + D + ++ V +
Sbjct: 108 TMCLWDARSG--DKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTL 165
Query: 180 AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 239
N + + P +AS + D + +F D A + TL+ H V SL
Sbjct: 166 DAQNGKY--TLSIAYSPDGKYIASGAIDGIITIF--DVAAGKVVQ--TLEGHAMPVRSLC 219
Query: 240 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK-CVC-TLSGHH 289
F L T SDD +K+ Y +S + T + W CV + G H
Sbjct: 220 FSPNSQLLLTASDDGHMKL---YDVTHSDVVGTLSGHASWVLCVAFSEDGKH 268
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 211 (79.3 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 87/365 (23%), Positives = 160/365 (43%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ +L+GH V +V+++P G ++S D +R W + FT K GH+ +
Sbjct: 107 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCK-----GHRHWVLS 161
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK---NGQ--FLA 157
+WSP G +AS + +WD +G + TL GH + ++W N + ++A
Sbjct: 162 ISWSPDGKKLASGCKNGQVLLWDPSTG-LQVGRTLTGHSKWITGLSWEPLHMNPECRYVA 220
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK-ED 216
+ S+D SV VW+ C ++ H Q V +R+ D +L SAS D T+K+++ D
Sbjct: 221 SSSKDGSVRVWDTTAG---RCERILTGHTQSVTCLRWGG-DGLLYSASQDRTIKVWRAHD 276
Query: 217 -------KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE-----YKP 264
+ W+N L + + + + AF+ + + ++K KE Y
Sbjct: 277 GVLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEATVNAQDLQGSLKELKERASSRYNL 335
Query: 265 GNSAG---IPTPDNDS---VW------KCVCTLSGHHGRTIYDISWCHLTDLIATACGDD 312
G + + +D +W K + ++GH I + + + ++A+A D
Sbjct: 336 VRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQA-LINQVLFSPDSRIVASASFDK 394
Query: 313 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
+I+++ G + L R H V +AW+ +L S S D +K+W +
Sbjct: 395 SIKLWD-----GRTGKYLASL-----RGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDV 443
Query: 373 KLENL 377
K + L
Sbjct: 444 KAQKL 448
Score = 194 (73.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 86/355 (24%), Positives = 154/355 (43%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T KGH+ V ++SW+P G ++S ++ + LW S G + + + GH + I +
Sbjct: 151 TCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDP-STGLQ-VGRTLT--GHSKWITGLS 206
Query: 105 WSP------CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
W P C ++AS+S D + VWD +G+ C L GH V + W +G L +
Sbjct: 207 WEPLHMNPEC-RYVASSSKDGSVRVWDTTAGR--CERILTGHTQSVTCLRWGGDG-LLYS 262
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
S+D+++ VW D C + H V + D L + +++
Sbjct: 263 ASQDRTIKVWRA--HDGVLCRT-LQGHGHWVNTMALST-DYALRTGAFEPAEATVNAQDL 318
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW---KEYKP-----GNSAGI 270
+ + LK S+ ++L + RL + SDD T+ +W ++ KP G+ A I
Sbjct: 319 QG---SLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALI 375
Query: 271 P----TPDNDSVW-----KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321
+PD+ V K + G G+ + + H+ + A D+ R+
Sbjct: 376 NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRG-HVAAVYQIAWSADS-RLLVSG- 432
Query: 322 EAGDSDMVSFDL----VHTEHRAHNQDVNCVAWNPVVPGM-LASCSDDGDVKLWQ 371
+ DS + +D+ + T+ H +V V W+P G +AS D +++W+
Sbjct: 433 -SSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSP--DGQRVASGGKDKCLRIWR 484
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00063
Identities = 46/171 (26%), Positives = 75/171 (43%)
Query: 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED-EYECAAVINAHIQDVKK 191
C ++LEGH V SV +S G++LA+ S D +V W++ E + C H V
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----KGHRHWVLS 161
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR----- 246
+ + P LAS + V L+ D + + TL H+ + L+++ +
Sbjct: 162 ISWSPDGKKLASGCKNGQVLLW--DPSTGLQVG-RTLTGHSKWITGLSWEPLHMNPECRY 218
Query: 247 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 297
+A+ S D +V++W + G I T SV C G G +Y S
Sbjct: 219 VASSSKDGSVRVW-DTTAGRCERILTGHTQSV---TCLRWGGDG-LLYSAS 264
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 178 (67.7 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 51/182 (28%), Positives = 85/182 (46%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
++ H V++ ++ G I+SCG DK ++++ E+ KA H+ + A+
Sbjct: 612 VRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKA-----HEDEVLCCAF 666
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL--ATCSRDK 163
S FIA+ S D +W+ +G + H +V ++ N +L AT S D
Sbjct: 667 STDDRFIATCSVDKKVKIWNSMTGGLV--HVYDEHSEQVNCCHFTNNSHYLLLATASSDC 724
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA-EADW 222
+ +W++ ++ EC + H V RF P D +LAS S D T+KL+ A E
Sbjct: 725 FLKLWDLNQK---ECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKS 781
Query: 223 IN 224
IN
Sbjct: 782 IN 783
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 54/234 (23%), Positives = 100/234 (42%)
Query: 59 NPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 118
N ++++ D ++LW K + GH ++ +SP +AS S D
Sbjct: 711 NSHYLLLATASSDCFLKLW---DLNQKECRNTMF--GHTNSVNHCRFSPDDKLLASCSAD 765
Query: 119 ATTAVWDKRSG---------QFECNATLEGHENEV--KSVTWSKNGQFLATCSRDKSVWV 167
T +WD +S QF N+ + EV K +WS +G + +++K +++
Sbjct: 766 GTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNK-IFL 824
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 227
+++ A + H ++ F P +++ A V+L+ D + A
Sbjct: 825 FDIHTGGLL--AEIHTGHHSTIQYCDFSPQNHLAVVALSQCCVELWNMDSC----LKVAD 878
Query: 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP-GNSAGIPTPDNDSVWK 280
+ H S V + F GS T SDD T+++W+ K NSA + + D V++
Sbjct: 879 CRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLKQEIDVVFQ 932
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 51/204 (25%), Positives = 87/204 (42%)
Query: 59 NPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 118
+P I+ GED + + E N+ I GH++T+R ++ G + S+S D
Sbjct: 971 SPHLQYIAFGGEDGAVEIL--ELLNNRIFQSRI---GHKKTVRHIQFTDDGKTLISSSDD 1025
Query: 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV--GE-EDE 175
++ VW+ +S ++ L+ H+ VK KN + L+ S D +V +W + G E +
Sbjct: 1026 SSIQVWNWQSEEY---VFLQAHQETVKDFKLLKNSKLLSW-SFDGTVKIWSIITGRIEKD 1081
Query: 176 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTV 235
+ C H V P +S S D T K++ + L+ H V
Sbjct: 1082 FVC------HQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSP----LHELRGHKGCV 1131
Query: 236 WSLAFDRIGSRLATCSDDATVKIW 259
F + LAT D+ ++IW
Sbjct: 1132 RCSVFSVDSTLLATGDDNGEIRIW 1155
Score = 96 (38.9 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 30/109 (27%), Positives = 44/109 (40%)
Query: 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240
V+ H V F +AS D T+++FK + E +K+H V AF
Sbjct: 611 VVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGE----KLLEIKAHEDEVLCCAF 666
Query: 241 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289
+ATCS D VKIW G + ++ V C T + H+
Sbjct: 667 STDDRFIATCSVDKKVKIWNSMT-GGLVHVYDEHSEQVNCCHFTNNSHY 714
Score = 89 (36.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 38/181 (20%), Positives = 72/181 (39%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK--FTAKAIL--SDGHQRT- 99
T+ GH V + ++P +++SC D ++LW +S + K S+ Q
Sbjct: 739 TMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDM 798
Query: 100 ---IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
++ +WS G I A+ + ++D +G GH + ++ +S
Sbjct: 799 EVIVKCCSWSADGTRIMVAAKNKIF-LFDIHTGGLLAEIHT-GHHSTIQYCDFSPQNHLA 856
Query: 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216
V +W + D A H+ V V F P + ++S D T++L++
Sbjct: 857 VVALSQCCVELWNM---DSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETK 913
Query: 217 K 217
K
Sbjct: 914 K 914
Score = 88 (36.0 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 40/164 (24%), Positives = 70/164 (42%)
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW----KEYKPGNSAGIPTPD-----N 275
F + H TV + F G L + SDD+++++W +EY + D N
Sbjct: 997 FQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVFLQAHQETVKDFKLLKN 1056
Query: 276 DSV--WKCVCTL---SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 330
+ W T+ S GR D CH +++ DA + F + + S
Sbjct: 1057 SKLLSWSFDGTVKIWSIITGRIEKDFV-CHQDTVLSCDISPDATK-FSSTSADKTAKIWS 1114
Query: 331 FDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
F+L+ H R H V C ++ V +LA+ D+G++++W +
Sbjct: 1115 FELLSPLHELRGHKGCVRCSVFS-VDSTLLATGDDNGEIRIWNV 1157
Score = 82 (33.9 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 296 ISWCHLTD-----LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350
++ CH T+ L+ATA D ++++ N + + M H VN +
Sbjct: 703 VNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFG----------HTNSVNHCRF 752
Query: 351 NPVVPGMLASCSDDGDVKLWQIKLEN 376
+P +LASCS DG +KLW +K N
Sbjct: 753 SPD-DKLLASCSADGTLKLWDVKSAN 777
Score = 63 (27.2 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
R H V+CV ++P L S SDD ++LW+ K
Sbjct: 880 RGHLSWVHCVMFSPDGSSFLTS-SDDQTIRLWETK 913
>ZFIN|ZDB-GENE-040426-2649 [details] [associations]
symbol:sec13 "SEC13 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0070971 "endoplasmic reticulum exit site" evidence=IDA]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0070278
"extracellular matrix constituent secretion" evidence=IMP]
[GO:0005622 "intracellular" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-2649
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0001889 GO:GO:0051216
GO:GO:0006888 GO:GO:0007029 GO:GO:0055123 GO:GO:0070278
GO:GO:0070971 CTD:6396 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 HOVERGEN:HBG057343 KO:K14004 EMBL:BX537350
EMBL:BC054585 EMBL:BC153483 EMBL:CT027575 IPI:IPI00513236
RefSeq:NP_998500.1 UniGene:Dr.5496 STRING:Q7T2E1
Ensembl:ENSDART00000077063 GeneID:798071 KEGG:dre:798071
InParanoid:Q7T2E1 OMA:ISWAPAT NextBio:20933269 Uniprot:Q7T2E1
Length = 320
Score = 204 (76.9 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 73/300 (24%), Positives = 132/300 (44%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + + + GT +++C D++++++ ++ G A GH+ + + AW+ P
Sbjct: 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADL---RGHEGPVWQVAWAHP 68
Query: 108 C-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKS 164
GN +AS S+D +W + + ++ GH++ V SV W G LA S D +
Sbjct: 69 MYGNILASCSYDRKVIIWKEENSTWDKMYEYTGHDSSVNSVCWGPYDFGLILACGSSDGA 128
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF--------------DNIL---ASASYD 207
+ V + ++ + NAH V + P N + S D
Sbjct: 129 ISVLTCSGDGHWDIKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPNYIKRFVSGGCD 188
Query: 208 DTVKLFKEDKAEADWINFATLKSHTSTV----WSLAFDRIGSRLATCSDDATVKIWKEYK 263
+ VKL+KE+ + W L++H+ V W+ + S +A+CS D V IW
Sbjct: 189 NLVKLWKEE--DGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVFIWTCDD 246
Query: 264 P-GNS--AGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320
P GN+ A + ND VW H +SW +++A + GD+ + ++KE+
Sbjct: 247 PAGNTWTAKLLHKFNDVVW--------H-------VSWSITGNILAVSGGDNKVTLWKES 291
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 67/252 (26%), Positives = 103/252 (40%)
Query: 134 NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193
N HE+ + G LATCS D+SV +++V + A + H V +V
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQI-LVADLRGHEGPVWQVA 64
Query: 194 F-HP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR--IGSRLAT 249
+ HP + NILAS SYD V ++KE+ + W H S+V S+ + G LA
Sbjct: 65 WAHPMYGNILASCSYDRKVIIWKEENST--WDKMYEYTGHDSSVNSVCWGPYDFGLILAC 122
Query: 250 CSDDATVKI--------WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 301
S D + + W K N+ I N W + G ++
Sbjct: 123 GSSDGAISVLTCSGDGHWDIKKINNAHTIGC--NAVSW-APAVVPGSLIEQPTGQKPNYI 179
Query: 302 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV--P-GML 358
++ C D+ ++++KE D + AH+ V V W P + P +
Sbjct: 180 KRFVSGGC-DNLVKLWKEEDGQWKEDQ--------KLEAHSDWVRDVGWAPSIGLPTSTI 230
Query: 359 ASCSDDGDVKLW 370
ASCS DG V +W
Sbjct: 231 ASCSQDGRVFIW 242
Score = 127 (49.8 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 30/110 (27%), Positives = 50/110 (45%)
Query: 46 LKGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
L+GH+G VW V+W +P G +++SC D+ + +W +E N K GH ++
Sbjct: 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEE---NSTWDKMYEYTGHDSSVNSV 109
Query: 104 AWSPC--GNFIASASFDATTAVWD-KRSGQFECNATLEGHENEVKSVTWS 150
W P G +A S D +V G ++ H +V+W+
Sbjct: 110 CWGPYDFGLILACGSSDGAISVLTCSGDGHWDIKKINNAHTIGCNAVSWA 159
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 33/117 (28%), Positives = 55/117 (47%)
Query: 44 QTLKGHQGRVWNVSWNPQ-G---TMISSCGEDKNIRLWG-KESFGNKFTAKAILSDGHQR 98
Q L+ H V +V W P G + I+SC +D + +W + GN +TAK L
Sbjct: 205 QKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVFIWTCDDPAGNTWTAK--LLHKFND 262
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQ 154
+ +WS GN +A + D +W + GQ+ C + + + V S+T S+ +
Sbjct: 263 VVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACISDVNKGQGAVSSITDSQQSE 319
Score = 85 (35.0 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 33/115 (28%), Positives = 51/115 (44%)
Query: 162 DKSVWVWEVGEED-EYECAAVINAHIQDVKKVRFHPFDNI----LASASYDDTVKLFK-E 215
D V +W+ EED +++ + AH V+ V + P + +AS S D V ++ +
Sbjct: 188 DNLVKLWK--EEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVFIWTCD 245
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGI 270
D A W L VW +++ G+ LA D V +WKE G A I
Sbjct: 246 DPAGNTW-TAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACI 299
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 204 (76.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 65/224 (29%), Positives = 108/224 (48%)
Query: 44 QTLKGHQGRVWNVSWNP-QGTMISSCGE-DKNIRLWGKESFGNKFTAKAILS-DGHQRTI 100
Q K H V++V W+ +G + G D+ ++LW + K++ + GH+ I
Sbjct: 105 QVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLW------DPTVGKSLCTFRGHESVI 158
Query: 101 RETAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLA 157
T WSP G F ASAS D T +WD +S + H+ E+ S W K N L
Sbjct: 159 YSTIWSPHIPGCF-ASASGDQTLRIWDVKSTGVRI--VVPAHQAEILSCDWCKYNENLLV 215
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKED 216
T + D S+ W++ + + + H +++V+F PF ++LAS SYD TV+ +
Sbjct: 216 TGAVDCSLRGWDL--RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS 273
Query: 217 KAEADWINFATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKIW 259
K + T++ HT L + +++A C+ D T+KI+
Sbjct: 274 KPDP---LLETVEHHTEFTCGLDLSLQSPTQVADCAWDETIKIY 314
Score = 181 (68.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 64/264 (24%), Positives = 116/264 (43%)
Query: 53 VWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GN 110
+++V+W+ ++ +C D +++LW K T + H + + WS G
Sbjct: 70 LFDVTWSENNEHILVTCSGDGSLQLWDTA----KATGPLQVYKEHTQEVYSVDWSQTRGE 125
Query: 111 -FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWV 167
+ S S+D T +WD G+ C T GHE+ + S WS + G F A+ S D+++ +
Sbjct: 126 QLVVSGSWDQTVKLWDPTVGKSLC--TFRGHESVIYSTIWSPHIPGCF-ASASGDQTLRI 182
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFA 226
W+V V+ AH ++ + + +N+L + + D +++ + D F
Sbjct: 183 WDVKSTG---VRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGW--DLRNVRQPVFE 237
Query: 227 TLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285
L HT + + F S LA+CS D TV+ W KP + T ++ + + C L
Sbjct: 238 LL-GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDPL--LETVEHHTEFTCGLDL 294
Query: 286 SGHHGRTIYDISWCHLTDLIATAC 309
S + D +W + C
Sbjct: 295 SLQSPTQVADCAWDETIKIYDPVC 318
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 209 (78.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 87/365 (23%), Positives = 160/365 (43%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
+ +L+GH V +V+++P G ++S D +R W + FT K GH+ +
Sbjct: 109 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCK-----GHRHWVLS 163
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK---NGQ--FLA 157
+WSP G +AS + +WD +G + TL GH + ++W N + ++A
Sbjct: 164 ISWSPDGKKLASGCKNGQILLWDPSTGT-QVGRTLTGHSKWITGLSWEPLHMNPECRYVA 222
Query: 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK-ED 216
+ S+D SV VW+ C ++ H Q V +R+ D +L SAS D T+K+++ D
Sbjct: 223 SSSKDGSVRVWDTTAG---RCERILTGHTQSVTCLRWGG-DGLLYSASQDRTIKVWRAHD 278
Query: 217 -------KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE-----YKP 264
+ W+N L + + + + AF+ + + ++K KE Y
Sbjct: 279 GVLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEATVNAQDLQGSLKELKERASSRYNL 337
Query: 265 GNSAG---IPTPDNDS---VW------KCVCTLSGHHGRTIYDISWCHLTDLIATACGDD 312
G + + +D +W K + ++GH I + + + ++A+A D
Sbjct: 338 VRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQA-LINQVLFSPDSRIVASASFDK 396
Query: 313 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
+I+++ G + L R H V +AW+ +L S S D +K+W +
Sbjct: 397 SIKLWD-----GRTGKYLASL-----RGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDV 445
Query: 373 KLENL 377
K + L
Sbjct: 446 KAQKL 450
Score = 198 (74.8 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 87/355 (24%), Positives = 154/355 (43%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
T KGH+ V ++SW+P G ++S ++ I LW S G + + + GH + I +
Sbjct: 153 TCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDP-STGTQ-VGRTLT--GHSKWITGLS 208
Query: 105 WSP------CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
W P C ++AS+S D + VWD +G+ C L GH V + W +G L +
Sbjct: 209 WEPLHMNPEC-RYVASSSKDGSVRVWDTTAGR--CERILTGHTQSVTCLRWGGDG-LLYS 264
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
S+D+++ VW D C + H V + D L + +++
Sbjct: 265 ASQDRTIKVWRA--HDGVLCRT-LQGHGHWVNTMALST-DYALRTGAFEPAEATVNAQDL 320
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW---KEYKP-----GNSAGI 270
+ + LK S+ ++L + RL + SDD T+ +W ++ KP G+ A I
Sbjct: 321 QG---SLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALI 377
Query: 271 P----TPDNDSVW-----KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321
+PD+ V K + G G+ + + H+ + A D+ R+
Sbjct: 378 NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRG-HVAAVYQIAWSADS-RLLVSG- 434
Query: 322 EAGDSDMVSFDL----VHTEHRAHNQDVNCVAWNPVVPGM-LASCSDDGDVKLWQ 371
+ DS + +D+ + T+ H +V V W+P G +AS D +++W+
Sbjct: 435 -SSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSP--DGQRVASGGKDKCLRIWR 486
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 45/171 (26%), Positives = 75/171 (43%)
Query: 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED-EYECAAVINAHIQDVKK 191
C ++LEGH V SV +S G++LA+ S D +V W++ E + C H V
Sbjct: 108 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----KGHRHWVLS 163
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR----- 246
+ + P LAS + + L+ D + + TL H+ + L+++ +
Sbjct: 164 ISWSPDGKKLASGCKNGQILLW--DPSTGTQVG-RTLTGHSKWITGLSWEPLHMNPECRY 220
Query: 247 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 297
+A+ S D +V++W + G I T SV C G G +Y S
Sbjct: 221 VASSSKDGSVRVW-DTTAGRCERILTGHTQSV---TCLRWGGDG-LLYSAS 266
>UNIPROTKB|E3NCB9 [details] [associations]
symbol:Cre-npp-20 "CRE-NPP-20 protein" species:31234
"Caenorhabditis remanei" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005643 GO:GO:0000910 OMA:IKLWKEE EMBL:DS268594
RefSeq:XP_003093969.1 ProteinModelPortal:E3NCB9
EnsemblMetazoa:CRE15709 GeneID:9811680 CTD:9811680 Uniprot:E3NCB9
Length = 311
Score = 201 (75.8 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 60/247 (24%), Positives = 111/247 (44%)
Query: 46 LKGHQGRVWNVSW-NPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
L GH G VW VSW +P+ G +++S DK + +W +E G K+ H+ +
Sbjct: 54 LSGHNGPVWKVSWAHPKYGGLLASAAYDKKVIIW-QEINGR--WQKSYEWACHEASTTSV 110
Query: 104 AWSP--CGNFIASASFDATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKNG------ 153
A++P G ++AS+S D + +D +GQ++ + + HE V SV+W+
Sbjct: 111 AFAPHQYGLWLASSSADGDIGILRYDSVTGQWQSSKIQKCHEQGVNSVSWAPGSADPTAK 170
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN----ILASASYDDT 209
+ L + DK +W + + + ++N H V++ + P N + S +
Sbjct: 171 KRLVSAGNDKCAKIWVFQQTNGF-WRKLLNGHTDFVREAAWCPVTNKGQHSIVSCGLEGN 229
Query: 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 269
+ L++ E D L+ ++ +F GS L+ DD + IW+E G
Sbjct: 230 LVLYRNSNIETDEWKSKLLEKSPCPLYHASFSPCGSFLSVSGDDNMITIWRENLQGQWIK 289
Query: 270 IPTPDND 276
+P + +
Sbjct: 290 VPRENKE 296
Score = 141 (54.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 59/287 (20%), Positives = 121/287 (42%)
Query: 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-P 107
H+ + + N G +++CG D+ ++++ G + I GH + + +W+ P
Sbjct: 12 HRDAIHDAQLNIYGNRLATCGSDRLVKIFEVRPNGQSYPL--IELSGHNGPVWKVSWAHP 69
Query: 108 -CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKS 164
G +ASA++D +W + +G+++ + HE SV ++ + G +LA+ S D
Sbjct: 70 KYGGLLASAAYDKKVIIWQEINGRWQKSYEWACHEASTTSVAFAPHQYGLWLASSSADGD 129
Query: 165 VWVWEVGE-EDEYECAAVINAHIQDVKKVRFHPFD------NILASASYDDTVKLFKEDK 217
+ + +++ + + H Q V V + P L SA D K++ +
Sbjct: 130 IGILRYDSVTGQWQSSKIQKCHEQGVNSVSWAPGSADPTAKKRLVSAGNDKCAKIWVFQQ 189
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSR----LATCSDDATVKIWKEYKPGNSAGIPTP 273
W L HT V A+ + ++ + +C + + +++ NS I T
Sbjct: 190 TNGFWRKL--LNGHTDFVREAAWCPVTNKGQHSIVSCGLEGNLVLYR-----NS-NIETD 241
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320
+ WK L +Y S+ ++ + D+ I I++EN
Sbjct: 242 E----WKS--KLLEKSPCPLYHASFSPCGSFLSVSGDDNMITIWREN 282
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 207 (77.9 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 66/226 (29%), Positives = 109/226 (48%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L+GH+ ++++ + P G + S D+++R+W + T + DG + A
Sbjct: 293 LRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLS--IEDG----VTTVAV 346
Query: 106 SPCGNFIASASFDATTAVWDKRSG----QFEC-NATLEGHENEVKSVTWSKNGQFLATCS 160
SP G IA+ S D T VWD +G + + N GHE+ V SV +S NG+ +A+ S
Sbjct: 347 SPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGS 406
Query: 161 RDKSVWVWEV-GEEDEYE-CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
D++V +W + G+ D+ C H V V P + + S S D V + D+A
Sbjct: 407 LDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFW--DQA 464
Query: 219 EADWINFATLKSHTSTVWSLA--FDRIGSR--LATCSDDATVKIWK 260
+ + L+ H ++V S+A + G+ AT S D +IWK
Sbjct: 465 SGNPL--LMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWK 508
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 66/217 (30%), Positives = 100/217 (46%)
Query: 55 NVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIAS 114
+V ++P G ++++ EDK IR+W K K IL GH++ I + P G+ + S
Sbjct: 260 SVCFSPDGKLLATGAEDKLIRIW---DLSTKRIIK-ILR-GHEQDIYSLDFFPDGDRLVS 314
Query: 115 ASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE--VGE 172
S D + +WD R+ Q C+ TL E+ V +V S +G+ +A S D++V VW+ G
Sbjct: 315 GSGDRSVRIWDLRTSQ--CSLTLS-IEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGF 371
Query: 173 EDEYECAAVINA--HIQDVKKVRFHPFDNILASASYDDTVKLFK-EDKAEADWINFATLK 229
E + N H V V F +AS S D TVKL+ E K++ T
Sbjct: 372 LVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYI 431
Query: 230 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
H V S+ + + S D V W + GN
Sbjct: 432 GHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQAS-GN 467
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 46/158 (29%), Positives = 73/158 (46%)
Query: 17 LPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRL 76
L +T+ ++ TG L R + N GH+ V++V+++ G I+S D+ ++L
Sbjct: 358 LDRTVRVWDSTTG---FLVERLDSGNENG-NGHEDSVYSVAFSNNGEQIASGSLDRTVKL 413
Query: 77 WGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT 136
W E +K + + GH+ + +P +I S S D WD+ SG
Sbjct: 414 WHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGN--PLLM 471
Query: 137 LEGHENEVKSVTWSKNGQ----FLATCSRD-KS-VWVW 168
L+GH N V SV S N + AT S D K+ +W W
Sbjct: 472 LQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWKW 509
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 47/191 (24%), Positives = 86/191 (45%)
Query: 81 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG- 139
+F + S H + +S G FIA+ + TT V++ +G+ E
Sbjct: 184 AFSKDLDIDMVHSLDHSSVVCCVRFSRDGKFIATGC-NKTTQVFNVTTGELVAKLIDESS 242
Query: 140 HENE-----------VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
+EN+ ++SV +S +G+ LAT + DK + +W++ + ++ H QD
Sbjct: 243 NENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTK---RIIKILRGHEQD 299
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
+ + F P + L S S D +V+++ ++ TL S V ++A G +A
Sbjct: 300 IYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCS----LTL-SIEDGVTTVAVSPDGKLIA 354
Query: 249 TCSDDATVKIW 259
S D TV++W
Sbjct: 355 AGSLDRTVRVW 365
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 207 (77.9 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 66/226 (29%), Positives = 109/226 (48%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
L+GH+ ++++ + P G + S D+++R+W + T + DG + A
Sbjct: 293 LRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLS--IEDG----VTTVAV 346
Query: 106 SPCGNFIASASFDATTAVWDKRSG----QFEC-NATLEGHENEVKSVTWSKNGQFLATCS 160
SP G IA+ S D T VWD +G + + N GHE+ V SV +S NG+ +A+ S
Sbjct: 347 SPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGS 406
Query: 161 RDKSVWVWEV-GEEDEYE-CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
D++V +W + G+ D+ C H V V P + + S S D V + D+A
Sbjct: 407 LDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFW--DQA 464
Query: 219 EADWINFATLKSHTSTVWSLA--FDRIGSR--LATCSDDATVKIWK 260
+ + L+ H ++V S+A + G+ AT S D +IWK
Sbjct: 465 SGNPL--LMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWK 508
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 66/217 (30%), Positives = 100/217 (46%)
Query: 55 NVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIAS 114
+V ++P G ++++ EDK IR+W K K IL GH++ I + P G+ + S
Sbjct: 260 SVCFSPDGKLLATGAEDKLIRIW---DLSTKRIIK-ILR-GHEQDIYSLDFFPDGDRLVS 314
Query: 115 ASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE--VGE 172
S D + +WD R+ Q C+ TL E+ V +V S +G+ +A S D++V VW+ G
Sbjct: 315 GSGDRSVRIWDLRTSQ--CSLTLS-IEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGF 371
Query: 173 EDEYECAAVINA--HIQDVKKVRFHPFDNILASASYDDTVKLFK-EDKAEADWINFATLK 229
E + N H V V F +AS S D TVKL+ E K++ T
Sbjct: 372 LVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYI 431
Query: 230 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
H V S+ + + S D V W + GN
Sbjct: 432 GHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQAS-GN 467
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 46/158 (29%), Positives = 73/158 (46%)
Query: 17 LPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRL 76
L +T+ ++ TG L R + N GH+ V++V+++ G I+S D+ ++L
Sbjct: 358 LDRTVRVWDSTTG---FLVERLDSGNENG-NGHEDSVYSVAFSNNGEQIASGSLDRTVKL 413
Query: 77 WGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT 136
W E +K + + GH+ + +P +I S S D WD+ SG
Sbjct: 414 WHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGN--PLLM 471
Query: 137 LEGHENEVKSVTWSKNGQ----FLATCSRD-KS-VWVW 168
L+GH N V SV S N + AT S D K+ +W W
Sbjct: 472 LQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWKW 509
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 47/191 (24%), Positives = 86/191 (45%)
Query: 81 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG- 139
+F + S H + +S G FIA+ + TT V++ +G+ E
Sbjct: 184 AFSKDLDIDMVHSLDHSSVVCCVRFSRDGKFIATGC-NKTTQVFNVTTGELVAKLIDESS 242
Query: 140 HENE-----------VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
+EN+ ++SV +S +G+ LAT + DK + +W++ + ++ H QD
Sbjct: 243 NENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTK---RIIKILRGHEQD 299
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
+ + F P + L S S D +V+++ ++ TL S V ++A G +A
Sbjct: 300 IYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCS----LTL-SIEDGVTTVAVSPDGKLIA 354
Query: 249 TCSDDATVKIW 259
S D TV++W
Sbjct: 355 AGSLDRTVRVW 365
>UNIPROTKB|Q9Y4P3 [details] [associations]
symbol:TBL2 "Transducin beta-like protein 2" species:9606
"Homo sapiens" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Orphanet:904 EMBL:AF097484
EMBL:AF097485 EMBL:AL080162 EMBL:AY358518 EMBL:AF056183
IPI:IPI00000948 PIR:T12544 RefSeq:NP_036585.1 UniGene:Hs.647044
ProteinModelPortal:Q9Y4P3 SMR:Q9Y4P3 IntAct:Q9Y4P3 STRING:Q9Y4P3
PhosphoSite:Q9Y4P3 DMDM:12643953 PaxDb:Q9Y4P3 PeptideAtlas:Q9Y4P3
PRIDE:Q9Y4P3 DNASU:26608 Ensembl:ENST00000305632
Ensembl:ENST00000575973 GeneID:26608 KEGG:hsa:26608 UCSC:uc003tyh.3
CTD:26608 GeneCards:GC07M072983 HGNC:HGNC:11586 HPA:HPA007477
MIM:605842 neXtProt:NX_Q9Y4P3 PharmGKB:PA36350 HOGENOM:HOG000007065
HOVERGEN:HBG009735 InParanoid:Q9Y4P3 OMA:VRLFHNT PhylomeDB:Q9Y4P3
GenomeRNAi:26608 NextBio:48976 ArrayExpress:Q9Y4P3 Bgee:Q9Y4P3
CleanEx:HS_TBL2 Genevestigator:Q9Y4P3 GermOnline:ENSG00000106638
Uniprot:Q9Y4P3
Length = 447
Score = 181 (68.8 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 62/235 (26%), Positives = 107/235 (45%)
Query: 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKF--TAKAILSDGHQRTIRET 103
LK H G + + ++ G +++C +D+ IR+W + F + + +A + H +R
Sbjct: 86 LKSHSGNISCMDFSSNGKYLATCADDRTIRIWSTKDFLQREHRSMRANVELDHATLVR-- 143
Query: 104 AWSP-CGNFIASASFDATTAVWD--KRS-GQFECNATLEG----HENEVKSVTWSKNGQF 155
+SP C FI + T V+ KR G + AT E H+ V + + G+F
Sbjct: 144 -FSPDCRAFIVWLANGDTLRVFKMTKREDGGYTFTATPEDFPKKHKAPVIDIGIANTGKF 202
Query: 156 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 215
+ T S D +V +W + + + + IN + + P +AS + VK+++
Sbjct: 203 IMTASSDTTVLIWSL----KGQVLSTINTNQMNNTHAAVSPCGRFVASCGFTPDVKVWEV 258
Query: 216 ---DKAE-ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK---EYK 263
K E + + LK H++ V S AF R+A+ S D T K+W EYK
Sbjct: 259 CFGKKGEFQEVVRAFELKGHSAAVHSFAFSNDSRRMASVSKDGTWKLWDTDVEYK 313
Score = 143 (55.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 36/132 (27%), Positives = 60/132 (45%)
Query: 135 ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV-INAHIQDVKKVR 193
A L+ H + + +S NG++LATC+ D+++ +W + + E ++ N + VR
Sbjct: 84 AALKSHSGNISCMDFSSNGKYLATCADDRTIRIWSTKDFLQREHRSMRANVELDHATLVR 143
Query: 194 FHPFDN-ILASASYDDTVKLFKEDKAEADWINFATL-----KSHTSTVWSLAFDRIGSRL 247
F P + + DT+++FK K E F K H + V + G +
Sbjct: 144 FSPDCRAFIVWLANGDTLRVFKMTKREDGGYTFTATPEDFPKKHKAPVIDIGIANTGKFI 203
Query: 248 ATCSDDATVKIW 259
T S D TV IW
Sbjct: 204 MTASSDTTVLIW 215
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 59/235 (25%), Positives = 102/235 (43%)
Query: 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106
K H+ V ++ G I + D + +W + G + + +Q A S
Sbjct: 185 KKHKAPVIDIGIANTGKFIMTASSDTTVLIWSLK--GQVLST----INTNQMNNTHAAVS 238
Query: 107 PCGNFIASASFDATTAVWDK---RSGQFE--CNA-TLEGHENEVKSVTWSKNGQFLATCS 160
PCG F+AS F VW+ + G+F+ A L+GH V S +S + + +A+ S
Sbjct: 239 PCGRFVASCGFTPDVKVWEVCFGKKGEFQEVVRAFELKGHSAAVHSFAFSNDSRRMASVS 298
Query: 161 RDKSVWVWEVGEE-----DEY--ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
+D + +W+ E D Y + A ++ P +LA AS ++ L+
Sbjct: 299 KDGTWKLWDTDVEYKKKQDPYLLKTGRFEEAAGAAPCRLALSPNAQVLALAS-GSSIHLY 357
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268
+ E + F + H + +L+FD G LA+C D A V+++ PG+ A
Sbjct: 358 NTRRGEKEEC-FERV--HGECIANLSFDITGRFLASCGDRA-VRLFHN-TPGHRA 407
Score = 66 (28.3 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 289 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
HG I ++S+ +T +CGD A+R+F P G MV H + RA N+
Sbjct: 372 HGECIANLSF-DITGRFLASCGDRAVRLFHNTP--GHRAMVEEMQGHLK-RASNE 422
Score = 46 (21.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 337 EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
E + H+ V+ A++ M AS S DG KLW +E
Sbjct: 274 ELKGHSAAVHSFAFSNDSRRM-ASVSKDGTWKLWDTDVE 311
Score = 44 (20.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 358 LASCSDDGDVKLWQI 372
+ASC DVK+W++
Sbjct: 244 VASCGFTPDVKVWEV 258
WARNING: HSPs involving 1102 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 377 377 0.00089 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1352
No. of states in DFA: 626 (67 KB)
Total size of DFA: 313 KB (2156 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.14u 0.13s 33.27t Elapsed: 00:00:02
Total cpu time: 33.33u 0.13s 33.46t Elapsed: 00:00:02
Start: Thu Aug 15 12:28:57 2013 End: Thu Aug 15 12:28:59 2013
WARNINGS ISSUED: 2