Your job contains 1 sequence.
>psy18093
MLYYRVVTFVSFQHSHCCQHFHACSHQGFGSCIHTVANTSTHVLIKDSDLGTYLSVLYSS
PRKYDSVTVAKCPVALLWRVNGPGVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGIN
DWLASIYNISEYYPLVPSKPEKFNSMIAISHKIFRLLLRPLFNNNLNLEKNETSIKFPFF
AVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSKPEKFNSMIAISHKINETDVVQHLT
HIAEVAFGPQQAKESVTLFNPRYEIKASLISHDIPGHLSKENEIMINSIAVCAGSGGELL
RGKKADLYITDATHRGTTVLLLEHSDSELHIHHVLHVYHILILGFVTGEMSHHDVLDATH
RGTTVLLLEHSDSERPFLQTMHTLLQIRLWHYLDWLKIYVSKADKDPIGYV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy18093
(411 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0014092 - symbol:CG4278 species:7227 "Drosophila m... 176 1.2e-22 2
RGD|1310329 - symbol:Nif3l1 "NIF3 NGG1 interacting factor... 152 3.2e-17 2
UNIPROTKB|Q05B89 - symbol:NIF3L1 "NIF3-like protein 1" sp... 149 7.5e-17 2
MGI|MGI:1929485 - symbol:Nif3l1 "Ngg1 interacting factor ... 156 1.5e-16 2
UNIPROTKB|E2RQI7 - symbol:NIF3L1 "Uncharacterized protein... 147 3.2e-16 2
UNIPROTKB|Q9GZT8 - symbol:NIF3L1 "NIF3-like protein 1" sp... 144 3.6e-16 2
ZFIN|ZDB-GENE-050706-80 - symbol:nif3l1 "NIF3 NGG1 intera... 139 5.7e-15 2
SGD|S000003189 - symbol:NIF3 "Protein of unknown function... 122 5.8e-10 2
UNIPROTKB|F1NDR9 - symbol:NIF3L1 "Uncharacterized protein... 149 6.3e-10 1
POMBASE|SPCC126.12 - symbol:SPCC126.12 "NGG1 interacting ... 101 9.3e-08 2
UNIPROTKB|B8ZZI0 - symbol:NIF3L1 "NIF3-like protein 1" sp... 127 1.6e-07 1
UNIPROTKB|C9JN42 - symbol:NIF3L1 "NIF3-like protein 1" sp... 127 1.6e-07 1
ASPGD|ASPL0000013513 - symbol:AN10437 species:162425 "Eme... 98 2.6e-07 2
UNIPROTKB|E7EXA3 - symbol:NIF3L1 "NIF3-like protein 1" sp... 127 5.7e-06 1
UNIPROTKB|Q81LU8 - symbol:BA_4512 "Dinuclear metal center... 104 0.00070 2
TIGR_CMR|BA_4512 - symbol:BA_4512 "conserved hypothetical... 104 0.00070 2
>FB|FBgn0014092 [details] [associations]
symbol:CG4278 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF01784 EMBL:AE014134 eggNOG:COG0327
GeneTree:ENSGT00390000003590 OMA:NNWLAKG InterPro:IPR002678
PANTHER:PTHR13799 SUPFAM:SSF102705 TIGRFAMs:TIGR00486 EMBL:AY069556
RefSeq:NP_609790.1 UniGene:Dm.8784 ProteinModelPortal:Q9NK57
SMR:Q9NK57 DIP:DIP-23705N MINT:MINT-821362 STRING:Q9NK57
PaxDb:Q9NK57 PRIDE:Q9NK57 EnsemblMetazoa:FBtr0080834 GeneID:34970
KEGG:dme:Dmel_CG4278 UCSC:CG4278-RA FlyBase:FBgn0014092
InParanoid:Q9NK57 OrthoDB:EOG431ZDR PhylomeDB:Q9NK57
GenomeRNAi:34970 NextBio:791160 Bgee:Q9NK57 GermOnline:CG4278
Uniprot:Q9NK57
Length = 292
Score = 176 (67.0 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 30/53 (56%), Positives = 37/53 (69%)
Query: 85 VTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGINDWLASIYNISEYYPLVP 137
+T WKERVV+ CLA++IA+YSPHT WD GG+NDWL+ NI PL P
Sbjct: 86 ITQSHWKERVVAACLANDIALYSPHTAWDKKSGGVNDWLSKAVNIISIRPLEP 138
Score = 145 (56.1 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 31/63 (49%), Positives = 40/63 (63%)
Query: 346 VTGEMSHHDVLDATHRGTTVLLLEHSDSERPFLQTMHTLLQIRLWHYLDWLKIYVSKADK 405
+TGEMSHH+VL+ TH TTVLL HS+SER FL H I + ++VS+ DK
Sbjct: 210 ITGEMSHHEVLEFTHNNTTVLLCNHSNSERGFL---HEFCPILAKSLNEECLVFVSEVDK 266
Query: 406 DPI 408
DP+
Sbjct: 267 DPL 269
Score = 135 (52.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 49/152 (32%), Positives = 69/152 (45%)
Query: 181 AVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPS--KPEKFNSMIAISHKINETDVVQH 238
A+YSPHT WD GG+NDWL+ NI PL P P S I K+ + VV+
Sbjct: 105 ALYSPHTAWDKKSGGVNDWLSKAVNIISIRPLEPELGAPPGTGSGRYIETKMELSQVVES 164
Query: 239 LTHIAEVAFGPQQAKESVTLFNPRYEIKASLISHDIPGHLSKENEIMINSIA-VCAGSGG 297
L ++ + SV + A + H P L + I S A + G
Sbjct: 165 LQ---------KRIRNSVHV--------ALAVGHT-PKTLIQSVGICAGSGASLLKGIQA 206
Query: 298 ELL-RGKKADLYITDATHRGTTVLLLEHSDSE 328
+L+ G+ + + + TH TTVLL HS+SE
Sbjct: 207 DLIITGEMSHHEVLEFTHNNTTVLLCNHSNSE 238
>RGD|1310329 [details] [associations]
symbol:Nif3l1 "NIF3 NGG1 interacting factor 3-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] Pfam:PF01784
RGD:1310329 GO:GO:0005739 GO:GO:0045893 eggNOG:COG0327
GeneTree:ENSGT00390000003590 HOGENOM:HOG000014260
HOVERGEN:HBG029337 OMA:NNWLAKG InterPro:IPR002678
InterPro:IPR017222 PANTHER:PTHR13799 PIRSF:PIRSF037490
SUPFAM:SSF102705 TIGRFAMs:TIGR00486 EMBL:BC097992 IPI:IPI00358022
UniGene:Rn.229097 STRING:Q4V7D6 PRIDE:Q4V7D6
Ensembl:ENSRNOT00000018014 UCSC:RGD:1310329 InParanoid:Q4V7D6
ArrayExpress:Q4V7D6 Genevestigator:Q4V7D6 Uniprot:Q4V7D6
Length = 376
Score = 152 (58.6 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 345 FVTGEMSHHDVLDATHRGTTVLLLEHSDSERPFLQTMHTLLQIRLWHYLDWLKIYVSKAD 404
++TGEMSHHDVLDA +G V+L EHS++ER FL + +L + H + + I +S+ D
Sbjct: 313 YLTGEMSHHDVLDAASKGINVILCEHSNTERGFLSDLQEMLGV---HLENKINIILSETD 369
Query: 405 KDPIGYV 411
+DP+ V
Sbjct: 370 RDPLRVV 376
Score = 128 (50.1 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 85 VTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSKPEKF 143
+T WKER+V L + +A+YSPHT +DA G+N WLA P+ PSK +
Sbjct: 102 ITWKTWKERLVIRALENRVAIYSPHTAYDAAPQGVNSWLAKGLGTCTTRPIHPSKAPNY 160
Score = 111 (44.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 254 ESVTLFNPRYEIKASL-ISH-DIPGHLSKENEIMINSIAVCAGSGGELLRGKKADLYIT- 310
ESV+L IK L + H + + + E + +A+CAGSGG +L+G +ADLY+T
Sbjct: 257 ESVSLATMIERIKRHLKLPHLRLALGVGRTLESPVKVVALCAGSGGSVLQGVEADLYLTG 316
Query: 311 --------DATHRGTTVLLLEHSDSE 328
DA +G V+L EHS++E
Sbjct: 317 EMSHHDVLDAASKGINVILCEHSNTE 342
Score = 91 (37.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 181 AVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSKPEKF 220
A+YSPHT +DA G+N WLA P+ PSK +
Sbjct: 121 AIYSPHTAYDAAPQGVNSWLAKGLGTCTTRPIHPSKAPNY 160
>UNIPROTKB|Q05B89 [details] [associations]
symbol:NIF3L1 "NIF3-like protein 1" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
Pfam:PF01784 GO:GO:0005739 GO:GO:0045893 EMBL:BC122596
IPI:IPI00709030 RefSeq:NP_001073718.1 UniGene:Bt.89946
STRING:Q05B89 PRIDE:Q05B89 Ensembl:ENSBTAT00000024331 GeneID:509473
KEGG:bta:509473 CTD:60491 eggNOG:COG0327
GeneTree:ENSGT00390000003590 HOGENOM:HOG000014260
HOVERGEN:HBG029337 InParanoid:Q05B89 OMA:NNWLAKG OrthoDB:EOG4X0MSZ
NextBio:20868981 InterPro:IPR002678 InterPro:IPR017222
PANTHER:PTHR13799 PIRSF:PIRSF037490 SUPFAM:SSF102705
TIGRFAMs:TIGR00486 Uniprot:Q05B89
Length = 377
Score = 149 (57.5 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 345 FVTGEMSHHDVLDATHRGTTVLLLEHSDSERPFLQTMHTLLQIRLWHYLDWLKIYVSKAD 404
++TGEMSHHDVLDA +G +V+L EHS++ER FL + +L H + + I +S+ D
Sbjct: 314 YLTGEMSHHDVLDAASQGISVILCEHSNTERGFLSDLRDMLDA---HLENKINIILSETD 370
Query: 405 KDPI 408
+DP+
Sbjct: 371 RDPL 374
Score = 128 (50.1 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 85 VTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSK 139
+T WKER+V L + + +YSPHT +DA G+N+WLA + P+ PSK
Sbjct: 103 ITWKTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGVCTSRPIHPSK 157
Score = 114 (45.2 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 254 ESVTLFNPRYEIKASL-ISH-DIPGHLSKENEIMINSIAVCAGSGGELLRGKKADLYIT- 310
ESV+L IK+ L +SH + + K E + +A+CAGSG +L+G ADLY+T
Sbjct: 258 ESVSLETMIERIKSHLKLSHVRLALGIGKTLESPVKVVALCAGSGSSVLQGTDADLYLTG 317
Query: 311 --------DATHRGTTVLLLEHSDSE 328
DA +G +V+L EHS++E
Sbjct: 318 EMSHHDVLDAASQGISVILCEHSNTE 343
Score = 96 (38.9 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 182 VYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSK----PEKFNSMI--AISHKINETDV 235
+YSPHT +DA G+N+WLA + P+ PSK P + + +++H + V
Sbjct: 123 IYSPHTAYDAAPQGVNNWLAKGLGVCTSRPIHPSKAPDYPTEGTHRVEFSVTHTQDPDKV 182
Query: 236 VQHLTHIAEVA 246
+ L IA V+
Sbjct: 183 ISALKEIAGVS 193
>MGI|MGI:1929485 [details] [associations]
symbol:Nif3l1 "Ngg1 interacting factor 3-like 1 (S. pombe)"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] Pfam:PF01784 MGI:MGI:1929485 GO:GO:0005739
GO:GO:0045893 EMBL:CH466548 CTD:60491 eggNOG:COG0327
GeneTree:ENSGT00390000003590 HOGENOM:HOG000014260
HOVERGEN:HBG029337 OMA:NNWLAKG OrthoDB:EOG4X0MSZ InterPro:IPR002678
InterPro:IPR017222 PANTHER:PTHR13799 PIRSF:PIRSF037490
SUPFAM:SSF102705 TIGRFAMs:TIGR00486 EMBL:AF284439 EMBL:AK011670
EMBL:AK154815 EMBL:AK158616 EMBL:BC065163 IPI:IPI00875732
RefSeq:NP_075364.2 UniGene:Mm.340248 ProteinModelPortal:Q9EQ80
SMR:Q9EQ80 STRING:Q9EQ80 PhosphoSite:Q9EQ80 PaxDb:Q9EQ80
PRIDE:Q9EQ80 Ensembl:ENSMUST00000087521 Ensembl:ENSMUST00000171597
GeneID:65102 KEGG:mmu:65102 InParanoid:Q6P1B7 NextBio:320279
Bgee:Q9EQ80 CleanEx:MM_NIF3L1 Genevestigator:Q9EQ80
GermOnline:ENSMUSG00000026036 Uniprot:Q9EQ80
Length = 376
Score = 156 (60.0 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 345 FVTGEMSHHDVLDATHRGTTVLLLEHSDSERPFLQTMHTLLQIRLWHYLDWLKIYVSKAD 404
++TGEMSHHDVLDA +G V+L EHS++ER FL + +L + H+ + + I +S+ D
Sbjct: 313 YLTGEMSHHDVLDAASKGINVILCEHSNTERGFLSELQEMLGV---HFENKINIILSETD 369
Query: 405 KDPIGYV 411
+DP+ V
Sbjct: 370 RDPLRVV 376
Score = 117 (46.2 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 85 VTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSK 139
+T WKE +V L + +AVYSPHT +DA G+N WLA P+ PS+
Sbjct: 102 ITWKTWKECLVIRALENRVAVYSPHTAYDAAPQGVNSWLAKGLGTCTTRPIHPSR 156
Score = 116 (45.9 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 254 ESVTLFNPRYEIKASL-ISH-DIPGHLSKENEIMINSIAVCAGSGGELLRGKKADLYIT- 310
ESV+L IK L +SH + + + E + +A+CAGSGG +L+G +ADLY+T
Sbjct: 257 ESVSLAIMIERIKTHLKLSHLRLALGVGRTLESQVKVVALCAGSGGSVLQGVEADLYLTG 316
Query: 311 --------DATHRGTTVLLLEHSDSE 328
DA +G V+L EHS++E
Sbjct: 317 EMSHHDVLDAASKGINVILCEHSNTE 342
Score = 88 (36.0 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 181 AVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSK 216
AVYSPHT +DA G+N WLA P+ PS+
Sbjct: 121 AVYSPHTAYDAAPQGVNSWLAKGLGTCTTRPIHPSR 156
>UNIPROTKB|E2RQI7 [details] [associations]
symbol:NIF3L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] Pfam:PF01784 GO:GO:0005739
GO:GO:0045893 GeneTree:ENSGT00390000003590 OMA:NNWLAKG
InterPro:IPR002678 InterPro:IPR017222 PANTHER:PTHR13799
PIRSF:PIRSF037490 SUPFAM:SSF102705 TIGRFAMs:TIGR00486
EMBL:AAEX03018012 EMBL:AAEX03018013 Ensembl:ENSCAFT00000019068
NextBio:20893171 Uniprot:E2RQI7
Length = 397
Score = 147 (56.8 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 345 FVTGEMSHHDVLDATHRGTTVLLLEHSDSERPFLQTMHTLLQIRLWHYLDWLKIYVSKAD 404
++TGEMSHHDVLDA +G V+L EHS++ER FL + +L H + + I +S+ D
Sbjct: 334 YLTGEMSHHDVLDAASQGINVILCEHSNTERGFLSDLRDMLGA---HLENKINIILSETD 390
Query: 405 KDPIGYV 411
+DP+ V
Sbjct: 391 RDPLHVV 397
Score = 125 (49.1 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 85 VTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSKPEKF 143
+T WKER+V L + + +YSPHT +DA G+N WLA + P+ PS+ +
Sbjct: 123 ITWKTWKERLVIRALENRVGIYSPHTAYDAAPQGVNSWLAKGLGVCTSRPIHPSRAPNY 181
Score = 108 (43.1 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 254 ESVTLFNPRYEIKASL-ISH-DIPGHLSKENEIMINSIAVCAGSGGELLRGKKADLYIT- 310
ESV+L IK L +SH + + + E + +A+CAGSG +L+G +ADLY+T
Sbjct: 278 ESVSLATMIDRIKRHLKLSHVRLALGVGRTLESPVKVVALCAGSGSTVLQGAEADLYLTG 337
Query: 311 --------DATHRGTTVLLLEHSDSE 328
DA +G V+L EHS++E
Sbjct: 338 EMSHHDVLDAASQGINVILCEHSNTE 363
Score = 93 (37.8 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 182 VYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSKPEKF--NSMIAISHKINETD----V 235
+YSPHT +DA G+N WLA + P+ PS+ + + +N T+ V
Sbjct: 143 IYSPHTAYDAAPQGVNSWLAKGLGVCTSRPIHPSRAPNYPTTGTHRVEFSVNGTEDLDKV 202
Query: 236 VQHLTHIAEVA 246
+ + IA+V+
Sbjct: 203 ISAVKRIADVS 213
>UNIPROTKB|Q9GZT8 [details] [associations]
symbol:NIF3L1 "NIF3-like protein 1" species:9606 "Homo
sapiens" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] Pfam:PF01784 GO:GO:0005739 GO:GO:0005737
GO:GO:0045893 EMBL:CH471063 EMBL:AC005037 CTD:60491 eggNOG:COG0327
HOGENOM:HOG000014260 HOVERGEN:HBG029337 OMA:NNWLAKG
InterPro:IPR002678 InterPro:IPR017222 PANTHER:PTHR13799
PIRSF:PIRSF037490 SUPFAM:SSF102705 TIGRFAMs:TIGR00486 EMBL:AF283538
EMBL:AB038949 EMBL:AY251943 EMBL:AF060513 EMBL:AF182416
EMBL:AK023378 EMBL:BC007654 IPI:IPI00451430 IPI:IPI00604624
IPI:IPI00873590 RefSeq:NP_001129511.1 RefSeq:NP_001135827.1
RefSeq:NP_001135828.1 RefSeq:NP_068596.2 UniGene:Hs.145284
ProteinModelPortal:Q9GZT8 SMR:Q9GZT8 IntAct:Q9GZT8
MINT:MINT-1438019 STRING:Q9GZT8 PhosphoSite:Q9GZT8 DMDM:160112850
PaxDb:Q9GZT8 PRIDE:Q9GZT8 DNASU:60491 Ensembl:ENST00000359683
Ensembl:ENST00000409020 Ensembl:ENST00000409357
Ensembl:ENST00000409588 Ensembl:ENST00000416651 GeneID:60491
KEGG:hsa:60491 UCSC:uc002uwl.2 GeneCards:GC02P201718
HGNC:HGNC:13390 HPA:HPA036335 MIM:605778 neXtProt:NX_Q9GZT8
PharmGKB:PA31629 InParanoid:Q9GZT8 GenomeRNAi:60491 NextBio:65383
ArrayExpress:Q9GZT8 Bgee:Q9GZT8 CleanEx:HS_NIF3L1
Genevestigator:Q9GZT8 GermOnline:ENSG00000196290 Uniprot:Q9GZT8
Length = 377
Score = 144 (55.7 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 345 FVTGEMSHHDVLDATHRGTTVLLLEHSDSERPFLQTMHTLLQIRLWHYLDWLKIYVSKAD 404
++TGEMSHHD LDA +G V+L EHS++ER FL + +L H + + I +S+ D
Sbjct: 314 YLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDS---HLENKINIILSETD 370
Query: 405 KDPIGYV 411
+DP+ V
Sbjct: 371 RDPLQVV 377
Score = 127 (49.8 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 85 VTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSKPEKF 143
+T + WKER+V L + + +YSPHT +DA G+N+WLA P+ PSK +
Sbjct: 103 ITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNY 161
Score = 110 (43.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 254 ESVTLFNPRYEIKASL-ISH-DIPGHLSKENEIMINSIAVCAGSGGELLRGKKADLYIT- 310
ESV+L IK L +SH + + + E + +A+CAGSG +L+G +ADLY+T
Sbjct: 258 ESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTG 317
Query: 311 --------DATHRGTTVLLLEHSDSE 328
DA +G V+L EHS++E
Sbjct: 318 EMSHHDTLDAASQGINVILCEHSNTE 343
Score = 93 (37.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 25/82 (30%), Positives = 38/82 (46%)
Query: 182 VYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSKPEKFNSMIAISHKIN-ETDVVQHLT 240
+YSPHT +DA G+N+WLA P+ PSK + + +H++ + Q L
Sbjct: 123 IYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPT--EGNHRVEFNVNYTQDLD 180
Query: 241 HIAEVAFGPQQAKESVTLFNPR 262
+ G SVT F+ R
Sbjct: 181 KVMSAVKGIDGV--SVTSFSAR 200
>ZFIN|ZDB-GENE-050706-80 [details] [associations]
symbol:nif3l1 "NIF3 NGG1 interacting factor 3-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01784 ZFIN:ZDB-GENE-050706-80 GeneTree:ENSGT00390000003590
InterPro:IPR002678 InterPro:IPR017222 PANTHER:PTHR13799
PIRSF:PIRSF037490 SUPFAM:SSF102705 TIGRFAMs:TIGR00486 EMBL:AL929495
IPI:IPI00994396 Ensembl:ENSDART00000130693 ArrayExpress:E7FET4
Bgee:E7FET4 Uniprot:E7FET4
Length = 425
Score = 139 (54.0 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 345 FVTGEMSHHDVLDATHRGTTVLLLEHSDSERPFLQTMHTLLQIRLWH 391
++TGEMSHH+VLDA +GT+V+L EHS+SER FL L RL H
Sbjct: 373 YITGEMSHHEVLDAVSKGTSVILSEHSNSERGFLGVFRERLSARLDH 419
Score = 123 (48.4 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 16/34 (47%), Positives = 27/34 (79%)
Query: 90 WKERVVSTCLAHNIAVYSPHTTWDAIQGGINDWL 123
WK+R+ + + I ++SPHT+WD+++GG+NDWL
Sbjct: 170 WKQRLAVRAIENGIGIFSPHTSWDSVEGGVNDWL 203
Score = 119 (46.9 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 285 MINSIAVCAGSGGELLRGKKADLYIT---------DATHRGTTVLLLEHSDSE 328
M+ ++AVCAGSG +++G ADLYIT DA +GT+V+L EHS+SE
Sbjct: 350 MVKTVAVCAGSGASVIQGVTADLYITGEMSHHEVLDAVSKGTSVILSEHSNSE 402
Score = 96 (38.9 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 12/19 (63%), Positives = 19/19 (100%)
Query: 182 VYSPHTTWDAIQGGINDWL 200
++SPHT+WD+++GG+NDWL
Sbjct: 185 IFSPHTSWDSVEGGVNDWL 203
>SGD|S000003189 [details] [associations]
symbol:NIF3 "Protein of unknown function" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] SGD:S000003189 Pfam:PF01784 GO:GO:0005739
EMBL:BK006941 eggNOG:COG0327 GeneTree:ENSGT00390000003590
HOGENOM:HOG000014260 OMA:NNWLAKG InterPro:IPR002678
PANTHER:PTHR13799 SUPFAM:SSF102705 TIGRFAMs:TIGR00486
OrthoDB:EOG4CZFR8 EMBL:Z72743 EMBL:AY693216 PIR:S64243
RefSeq:NP_011294.1 ProteinModelPortal:P53081 SMR:P53081
DIP:DIP-1469N IntAct:P53081 MINT:MINT-403416 STRING:P53081
PaxDb:P53081 PeptideAtlas:P53081 EnsemblFungi:YGL221C GeneID:852651
KEGG:sce:YGL221C CYGD:YGL221c NextBio:971924 Genevestigator:P53081
GermOnline:YGL221C Uniprot:P53081
Length = 288
Score = 122 (48.0 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 49/169 (28%), Positives = 75/169 (44%)
Query: 173 TSIKFPFF--AVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSKPEKFNSMIAISHKI 230
T+IK + +VY PHT DA +GG+NDWL N E K ++ +S
Sbjct: 101 TAIKLIQYGISVYCPHTAVDAARGGVNDWLVRGLNNGE-------NVAKSYALETVS--- 150
Query: 231 NETDVVQHLTHIAEVAFGPQQAKESVTLFNPRYEIKASLISHDIPGHLSKENEIMINSIA 290
ETD + E F + E + N + ++ + S N++ I +A
Sbjct: 151 GETDDLIGYGRFVE--FNKDISLEQIVK-NVKRVLRVPYVQVASLAAPSAWNQLKIKKVA 207
Query: 291 VCAGSGGELLRGKK--ADLYIT-DATHR--------GTTVLLLEHSDSE 328
VCAGSG + + K DLY T + +H G TV++ HS++E
Sbjct: 208 VCAGSGSGVFKQLKEDVDLYYTGEMSHHEVLKWKEMGKTVIVCNHSNTE 256
Score = 116 (45.9 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 30/65 (46%), Positives = 39/65 (60%)
Query: 345 FVTGEMSHHDVLDATHRGTTVLLLEHSDSERPFLQ-TMHTLLQIRLWHYLDWLKIYVSKA 403
+ TGEMSHH+VL G TV++ HS++ER FLQ M LLQ H ++ VSK
Sbjct: 227 YYTGEMSHHEVLKWKEMGKTVIVCNHSNTERGFLQDVMKGLLQDE-GH-----EVVVSKM 280
Query: 404 DKDPI 408
D DP+
Sbjct: 281 DCDPL 285
Score = 94 (38.1 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 33/96 (34%), Positives = 44/96 (45%)
Query: 37 ANTSTHVLIKDSDLGTYLSVLYSSPRKYDSVTVAKCPVAL-LWRVNGPGVTNDKWKERVV 95
AN T VL+ DL SV + +V VA P W P TN + + +
Sbjct: 49 ANAKTKVLLT-VDLTK--SVAQEAVDANCNVIVAYHPFIFPSWNRLSPH-TNPQHETAI- 103
Query: 96 STCLAHNIAVYSPHTTWDAIQGGINDWLASIYNISE 131
+ + I+VY PHT DA +GG+NDWL N E
Sbjct: 104 -KLIQYGISVYCPHTAVDAARGGVNDWLVRGLNNGE 138
>UNIPROTKB|F1NDR9 [details] [associations]
symbol:NIF3L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] Pfam:PF01784 GO:GO:0005739 GO:GO:0045893
GeneTree:ENSGT00390000003590 InterPro:IPR002678 PANTHER:PTHR13799
SUPFAM:SSF102705 EMBL:AADN02019862 IPI:IPI00576671
Ensembl:ENSGALT00000013388 OMA:LXEMSHH Uniprot:F1NDR9
Length = 159
Score = 149 (57.5 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 345 FVTGEMSHHDVLDATHRGTTVLLLEHSDSERPFLQTMHTLLQIRLWHYLDWLKIYVSKAD 404
++TGEMSHHDVLDA G +V+L EHS++ER FL + L I H + + I +S+ D
Sbjct: 96 YLTGEMSHHDVLDAVANGISVILCEHSNTERGFLSELRDTLTI---HLQNKINIILSEKD 152
Query: 405 KDPIGYV 411
+DP+ V
Sbjct: 153 RDPLQVV 159
>POMBASE|SPCC126.12 [details] [associations]
symbol:SPCC126.12 "NGG1 interacting factor 3 family,
implicated in transcription" species:4896 "Schizosaccharomyces
pombe" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=ISM] PomBase:SPCC126.12 Pfam:PF01784 GO:GO:0005829
GO:GO:0005739 GO:GO:0005634 EMBL:CU329672 GO:GO:0006351
eggNOG:COG0327 HOGENOM:HOG000014260 InterPro:IPR002678
PANTHER:PTHR13799 SUPFAM:SSF102705 TIGRFAMs:TIGR00486 PIR:T40916
RefSeq:NP_588455.1 ProteinModelPortal:O94404 STRING:O94404
EnsemblFungi:SPCC126.12.1 GeneID:2539063 KEGG:spo:SPCC126.12
OMA:ADWQAEE OrthoDB:EOG4CZFR8 NextBio:20800236 Uniprot:O94404
Length = 278
Score = 101 (40.6 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 345 FVTGEMSHHDVLDATHRGTTVLLLEHSDSERPFLQTMHTLLQIRLWHY--LDWLKIYVSK 402
+ TGE+SHH VL A +G +V+L HS++ER +L+ + +H +D + VS
Sbjct: 211 YFTGELSHHQVLAAMAKGISVILCGHSNTERGYLKDVMCQKLASSFHKEGVD-ANVIVSS 269
Query: 403 ADKDPI 408
D DP+
Sbjct: 270 MDADPL 275
Score = 89 (36.4 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 85 VTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGINDWLA 124
+T + ++R + A I VYSPHT DA G+NDWLA
Sbjct: 82 ITMEDPQQRSLLKLAAEGIHVYSPHTAVDAAVDGVNDWLA 121
>UNIPROTKB|B8ZZI0 [details] [associations]
symbol:NIF3L1 "NIF3-like protein 1" species:9606 "Homo
sapiens" [GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF01784
GO:GO:0005739 EMBL:AC005037 HOGENOM:HOG000014260 OrthoDB:EOG4X0MSZ
InterPro:IPR002678 PANTHER:PTHR13799 SUPFAM:SSF102705
HGNC:HGNC:13390 IPI:IPI00916550 ProteinModelPortal:B8ZZI0
SMR:B8ZZI0 STRING:B8ZZI0 Ensembl:ENST00000409129
ArrayExpress:B8ZZI0 Bgee:B8ZZI0 Uniprot:B8ZZI0
Length = 162
Score = 127 (49.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 85 VTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSKPEKF 143
+T + WKER+V L + + +YSPHT +DA G+N+WLA P+ PSK +
Sbjct: 76 ITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNY 134
>UNIPROTKB|C9JN42 [details] [associations]
symbol:NIF3L1 "NIF3-like protein 1" species:9606 "Homo
sapiens" [GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF01784
GO:GO:0005739 EMBL:AC005037 HOGENOM:HOG000014260 InterPro:IPR002678
PANTHER:PTHR13799 SUPFAM:SSF102705 HGNC:HGNC:13390 IPI:IPI00451429
ProteinModelPortal:C9JN42 SMR:C9JN42 STRING:C9JN42 PRIDE:C9JN42
Ensembl:ENST00000454952 ArrayExpress:C9JN42 Bgee:C9JN42
Uniprot:C9JN42
Length = 163
Score = 127 (49.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 85 VTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSKPEKF 143
+T + WKER+V L + + +YSPHT +DA G+N+WLA P+ PSK +
Sbjct: 103 ITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNY 161
>ASPGD|ASPL0000013513 [details] [associations]
symbol:AN10437 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] Pfam:PF01784 EMBL:BN001302
HOGENOM:HOG000014260 OMA:NNWLAKG InterPro:IPR002678
PANTHER:PTHR13799 SUPFAM:SSF102705 TIGRFAMs:TIGR00486
EnsemblFungi:CADANIAT00005045 Uniprot:C8V7M5
Length = 370
Score = 98 (39.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 62 RKYDSVTVAKCPVALLWRVNGPGVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGIND 121
RK DSV VA P+ ++R ND ++ ++ A I+VYSPHT DA GG+ D
Sbjct: 82 RK-DSVVVAYHPI--IFRGLKSLTFNDPQQQSLLRLA-AEGISVYSPHTAVDATPGGMGD 137
Query: 122 WLASI 126
WL +
Sbjct: 138 WLCDV 142
Score = 92 (37.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 347 TGEMSHHDVLDATHRGTTVLLLEHSDSERPFLQTM 381
TGEMSHH+ L A G+ V+ L HS++ER +L+ +
Sbjct: 280 TGEMSHHETLFAIENGSVVVALAHSNTERGYLRAV 314
Score = 78 (32.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 181 AVYSPHTTWDAIQGGINDWLASI 203
+VYSPHT DA GG+ DWL +
Sbjct: 120 SVYSPHTAVDATPGGMGDWLCDV 142
Score = 67 (28.6 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 274 IPGHLSKENEIMINSIAVCAGSGGE-LLRGKKA--DLYIT-DATHR--------GTTVLL 321
IP S E +I I ++ VC GSG L++G K DL T + +H G+ V+
Sbjct: 242 IPQSASVE-DIKIRTVGVCPGSGSSVLMKGVKQIPDLLFTGEMSHHETLFAIENGSVVVA 300
Query: 322 LEHSDSE 328
L HS++E
Sbjct: 301 LAHSNTE 307
>UNIPROTKB|E7EXA3 [details] [associations]
symbol:NIF3L1 "NIF3-like protein 1" species:9606 "Homo
sapiens" [GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF01784
GO:GO:0005739 EMBL:AC005037 InterPro:IPR002678 PANTHER:PTHR13799
SUPFAM:SSF102705 HGNC:HGNC:13390 IPI:IPI00917949
ProteinModelPortal:E7EXA3 PRIDE:E7EXA3 Ensembl:ENST00000426253
ArrayExpress:E7EXA3 Bgee:E7EXA3 Uniprot:E7EXA3
Length = 209
Score = 127 (49.8 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 85 VTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSKPEKF 143
+T + WKER+V L + + +YSPHT +DA G+N+WLA P+ PSK +
Sbjct: 76 ITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNY 134
>UNIPROTKB|Q81LU8 [details] [associations]
symbol:BA_4512 "Dinuclear metal center protein, YbgI/SA1388
family" species:1392 "Bacillus anthracis" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01784 EMBL:AE016879 GenomeReviews:AE016879_GR GO:GO:0010038
InterPro:IPR002678 PANTHER:PTHR13799 SUPFAM:SSF102705
TIGRFAMs:TIGR00486 HOGENOM:HOG000014257 InterPro:IPR017221
PIRSF:PIRSF037489 RefSeq:NP_846736.1 ProteinModelPortal:Q81LU8
SMR:Q81LU8 DNASU:1088237 EnsemblBacteria:EBBACT00000008264
GeneID:1088237 KEGG:ban:BA_4512 PATRIC:18786614
ProtClustDB:CLSK873005 Uniprot:Q81LU8
Length = 373
Score = 104 (41.7 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 85 VTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSKPEKFN 144
+ DK +++ C+ ++IA+Y+ HT D +GG+ND LA + L P+ E+
Sbjct: 79 IHTDKAYGKIIEKCIKNDIAIYAAHTNVDVAKGGVNDLLAEALGLQNTEVLAPTYAEEMK 138
Query: 145 SMI 147
++
Sbjct: 139 KIV 141
Score = 52 (23.4 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 345 FVTGEMSHHDVLDATHRGTTVLLLEHSDSERPFLQTMHTLLQIRLWHYLDWLKIYVSKAD 404
+VTG+M +H DA G ++ H+ E+ Q + LQ ++ + I+ S+
Sbjct: 308 YVTGDMYYHVAHDAMMLGLNIVDPGHN-VEKVMKQGVQKQLQEKVDAKKLNVNIHASQLH 366
Query: 405 KDPIGYV 411
DP +V
Sbjct: 367 TDPFTFV 373
>TIGR_CMR|BA_4512 [details] [associations]
symbol:BA_4512 "conserved hypothetical protein TIGR00486"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01784 EMBL:AE016879 GenomeReviews:AE016879_GR GO:GO:0010038
InterPro:IPR002678 PANTHER:PTHR13799 SUPFAM:SSF102705
TIGRFAMs:TIGR00486 HOGENOM:HOG000014257 InterPro:IPR017221
PIRSF:PIRSF037489 RefSeq:NP_846736.1 ProteinModelPortal:Q81LU8
SMR:Q81LU8 DNASU:1088237 EnsemblBacteria:EBBACT00000008264
GeneID:1088237 KEGG:ban:BA_4512 PATRIC:18786614
ProtClustDB:CLSK873005 Uniprot:Q81LU8
Length = 373
Score = 104 (41.7 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 85 VTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQGGINDWLASIYNISEYYPLVPSKPEKFN 144
+ DK +++ C+ ++IA+Y+ HT D +GG+ND LA + L P+ E+
Sbjct: 79 IHTDKAYGKIIEKCIKNDIAIYAAHTNVDVAKGGVNDLLAEALGLQNTEVLAPTYAEEMK 138
Query: 145 SMI 147
++
Sbjct: 139 KIV 141
Score = 52 (23.4 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 345 FVTGEMSHHDVLDATHRGTTVLLLEHSDSERPFLQTMHTLLQIRLWHYLDWLKIYVSKAD 404
+VTG+M +H DA G ++ H+ E+ Q + LQ ++ + I+ S+
Sbjct: 308 YVTGDMYYHVAHDAMMLGLNIVDPGHN-VEKVMKQGVQKQLQEKVDAKKLNVNIHASQLH 366
Query: 405 KDPIGYV 411
DP +V
Sbjct: 367 TDPFTFV 373
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 411 377 0.00089 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 622 (66 KB)
Total size of DFA: 277 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 27.69u 0.10s 27.79t Elapsed: 00:00:22
Total cpu time: 27.69u 0.10s 27.79t Elapsed: 00:00:24
Start: Thu Aug 15 12:41:33 2013 End: Thu Aug 15 12:41:57 2013