Query psy18094
Match_columns 260
No_of_seqs 90 out of 92
Neff 4.5
Searched_HMMs 46136
Date Fri Aug 16 22:25:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18094.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18094hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3944|consensus 100.0 2E-109 5E-114 746.2 14.6 248 1-248 1-264 (291)
2 PF05197 TRIC: TRIC channel; 100.0 7.9E-71 1.7E-75 484.9 14.1 182 34-218 1-197 (197)
3 PRK10578 hypothetical protein; 97.8 0.00042 9.2E-09 62.3 13.3 161 47-221 26-199 (207)
4 COG2860 Predicted membrane pro 96.7 0.057 1.2E-06 49.0 13.4 157 48-218 30-198 (209)
5 PF03458 UPF0126: UPF0126 doma 83.8 2.5 5.4E-05 32.4 4.8 41 48-88 25-65 (80)
6 PF05449 DUF754: Protein of un 79.6 2.3 4.9E-05 33.4 3.3 47 46-92 22-69 (83)
7 COG2860 Predicted membrane pro 63.9 14 0.0003 33.8 5.0 66 48-138 117-183 (209)
8 PF03458 UPF0126: UPF0126 doma 52.7 35 0.00075 26.1 4.8 62 116-184 15-76 (80)
9 PF02426 MIase: Muconolactone 46.1 9 0.00019 30.6 0.7 23 2-24 57-79 (91)
10 TIGR03221 muco_delta muconolac 44.1 9.6 0.00021 30.5 0.6 23 2-24 56-78 (90)
11 PF09622 DUF2391: Putative int 23.7 1.1E+02 0.0024 29.0 4.1 44 203-246 74-117 (267)
12 COG4829 CatC1 Muconolactone de 22.7 43 0.00094 27.1 1.0 23 2-24 57-79 (98)
No 1
>KOG3944|consensus
Probab=100.00 E-value=2.1e-109 Score=746.24 Aligned_cols=248 Identities=59% Similarity=1.030 Sum_probs=245.3
Q ss_pred CChhHHHHHHHHhhcccCchhhhhHHHHHHHHHHhhhhCCCcchhcccCchhHHHHHHHHHHhhHHhHhhhcCCcccccc
Q psy18094 1 MDPEAFLDLANQVMKLKMYPYFDVAHSVLCALHVREDLGAGAQTFSRKHPLSCWLSTMLVIFAGGMVAGGLLGEPILAPL 80 (260)
Q Consensus 1 ~d~~~~~~~a~~~~~l~mfP~FdiaHy~l~~l~lR~elg~ga~~~sr~~P~a~WlssmL~cFaG~iLs~~LLGep~l~~l 80 (260)
||+++|+|+|++|+|+|||||||+|||++++|++|+|+|+.|.+||||||+|||||+|||||||+||+|+|||||+++||
T Consensus 1 md~~s~~ela~~~srl~mfP~FDiah~lvsil~vr~dlG~~A~~fSrKhPiscWlsaML~cFag~~La~~LLgEPii~pl 80 (291)
T KOG3944|consen 1 MDSPSLDELALAFSRLKMFPFFDIAHYLVSILAVRRDLGANAAAFSRKHPISCWLSAMLHCFAGGILACLLLGEPIIAPL 80 (291)
T ss_pred CCchhHHHHHHHhhhccccchhhHHHHHHHHHHhhhccChhhHHHhhcCCHHHHHHHHHHHHhHHHHHHHHhcCccchhh
Confidence 89999999999999999999999999999999999998888999999999999999999999999999999999999999
Q ss_pred cCcchhhHHHHh---------------hccchhhhHHhhhhhHHHHHHHHHHhhhhhhhCCCchhhHhhHhhcccCcccc
Q psy18094 81 KNTQQLVIATAA---------------SKFLPVKILFSGMKEIYRCKKIHDGVTHAAKLYPSAYIIMIIIGTLKGNGAGF 145 (260)
Q Consensus 81 ~n~~~VlLAs~v---------------~~~lPvklv~~~mKEv~R~~KI~~GV~~A~~~Yp~~~~v~iliG~~kGaG~~~ 145 (260)
+||+||||||+| ++|+|||+++++||||+|+|||.+||+||+++|||+|++||++||+||||+++
T Consensus 81 knh~~ILLas~vWYlvFy~PfDlvyk~a~~lPVklv~s~MKEV~R~~KI~~GV~HA~~~Ypn~wiVmI~iG~aKGaG~gi 160 (291)
T KOG3944|consen 81 KNHTDILLASAVWYLVFYCPFDLVYKGAKFLPVKLVASAMKEVTRTWKIAGGVTHAAKLYPNGWIVMIAIGWAKGAGSGI 160 (291)
T ss_pred hcCCceehhhhhhhheeecchhhhheeeeeecHHHHHHHHHHHHHHHHhhcccchHHHhCCCceEEEEEEeeeccCCchH
Confidence 999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCCCcccccccCchhHHHHHHHHHHHHhhcCCccccccchHHHHHHHHHHHHHHHHHHhccCCCchhhh
Q psy18094 146 IKLLERLIRGVWTPTAMEFMQPSFPTKSSIVASIIFVLDKKTDLISAPHALVYFGIVIFFIYFKLSSILLGIHDPFIPFE 225 (260)
Q Consensus 146 ~~~~eqLlrG~w~p~~~E~LkpS~~TK~sl~~silftL~~~~~~l~~~~~~v~~~~~~f~v~~K~~~~~~~~~~Pf~p~E 225 (260)
++|||||+||+|+||+||+||||||||+|+++||+||||++++++++||+++|+++|+|+||||++++.+++||||+|+|
T Consensus 161 v~~~EqLvRG~W~Pt~~E~L~pSf~tKa~l~asiiftlq~~t~~l~aph~lvyf~~v~F~VyfKls~~~l~~hdpf~plE 240 (291)
T KOG3944|consen 161 VKNFEQLVRGVWKPTGNEILRPSFPTKASLLASIIFTLQKKTQWLTAPHALVYFLIVIFFVYFKLSSMTLHVHDPFAPLE 240 (291)
T ss_pred HHHHHHHhccCcCCCcCeecccccchHHHHHHhhhheeeccccEEecccceeeehhHHHHHHHHHHHHHHhcCCcchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhccchhhhhh-hhhhcCC
Q psy18094 226 NLGCALFFGGIWDSLS-RMFGRGG 248 (260)
Q Consensus 226 n~l~~~~fG~~~~~~~-~~~~~~~ 248 (260)
|.+|++||||+||+.+ |..++++
T Consensus 241 n~~cavffGgi~d~~s~k~l~~s~ 264 (291)
T KOG3944|consen 241 NLLCAVFFGGIWDASSCKNLAKSR 264 (291)
T ss_pred hHhHHHHhcccCcchhhhhhccCC
Confidence 9999999999999999 9998885
No 2
>PF05197 TRIC: TRIC channel; InterPro: IPR007866 TRIC (trimeric intracellular cation) channels are differentially expressed in intracellular stores in animal cell types. TRIC subtypes contain three proposed transmembrane segments, and form homo-trimers with a bullet-like structure. Electrophysiological measurements with purified TRIC preparations identify a monovalent cation-selective channel []. ; GO: 0005261 cation channel activity, 0015672 monovalent inorganic cation transport, 0016020 membrane
Probab=100.00 E-value=7.9e-71 Score=484.90 Aligned_cols=182 Identities=52% Similarity=0.939 Sum_probs=174.0
Q ss_pred HhhhhCCCcchhcccCchhHHHHHHHHHHhhHHhHhhhcCCcccccccCcchhhHHHHh---------------hccchh
Q psy18094 34 VREDLGAGAQTFSRKHPLSCWLSTMLVIFAGGMVAGGLLGEPILAPLKNTQQLVIATAA---------------SKFLPV 98 (260)
Q Consensus 34 lR~elg~ga~~~sr~~P~a~WlssmL~cFaG~iLs~~LLGep~l~~l~n~~~VlLAs~v---------------~~~lPv 98 (260)
|||| ||++++|||||+|||+++||+||||+||+|+|+||||++||+|+++|++||+| ++++|+
T Consensus 1 l~~~--~g~~~~srk~Pla~Wls~mL~cFgG~iL~~lLlG~p~l~~l~n~~~vllat~iWylify~P~Dl~~k~~~~~Pv 78 (197)
T PF05197_consen 1 LREQ--PGAVSFSRKHPLASWLSSMLMCFGGGILSNLLLGEPPLAPLANNTDVLLATAIWYLIFYCPFDLFYKLASFLPV 78 (197)
T ss_pred CCCC--CccchhHHhChHHHHHHHHHHHHhHHHHHHHHhCCCchhHHhCCChHHHHHHHHHHHHhCccHHHHHHHhcccH
Confidence 5887 99999999999999999999999999999999999999999999999999999 899999
Q ss_pred hhHHhhhhhHHHHHHHHHHhhhhhhhCCCchhhHhhHhhcccCcccchHHHHHHHhcCCCCCcccccccCchhHHHHHHH
Q psy18094 99 KILFSGMKEIYRCKKIHDGVTHAAKLYPSAYIIMIIIGTLKGNGAGFIKLLERLIRGVWTPTAMEFMQPSFPTKSSIVAS 178 (260)
Q Consensus 99 klv~~~mKEv~R~~KI~~GV~~A~~~Yp~~~~v~iliG~~kGaG~~~~~~~eqLlrG~w~p~~~E~LkpS~~TK~sl~~s 178 (260)
|+++++|||++|+|||.+||+||+++|||+|++||++||+||||+++|+|+||++||+|+||+||++||||+||+|+++|
T Consensus 79 kl~~~~mkev~R~~kI~~GV~~A~~~Yp~~~~~~iliG~~kG~G~~~~~~~~~llrg~w~p~~~e~l~pSf~tK~~l~~s 158 (197)
T PF05197_consen 79 KLVLAAMKEVSRAKKILSGVDHALKLYPNSWIVMILIGTVKGAGGGFMKPFEQLLRGSWKPESNELLKPSFPTKACLLAS 158 (197)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeeehhhhhccccchHHHHHHHHHhcCCCcccHHHHhccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCccccccchHHHHHHHHHHHHHHHHHHhccC
Q psy18094 179 IIFVLDKKTDLISAPHALVYFGIVIFFIYFKLSSILLGIH 218 (260)
Q Consensus 179 ilftL~~~~~~l~~~~~~v~~~~~~f~v~~K~~~~~~~~~ 218 (260)
|+|+||+++.++ +++|++++++++|+|++|++|+++++|
T Consensus 159 ilf~l~~~~~l~-~~~~~L~~~~~vf~v~~k~~~~~~~~~ 197 (197)
T PF05197_consen 159 ILFTLQHTDYLP-ISPHQLVFLYTVFLVYFKLSMMLLGSH 197 (197)
T ss_pred HHHHHHHcCccc-cCHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999986555 566666666999999999999999986
No 3
>PRK10578 hypothetical protein; Provisional
Probab=97.84 E-value=0.00042 Score=62.27 Aligned_cols=161 Identities=16% Similarity=0.257 Sum_probs=109.8
Q ss_pred ccCchhHHHHHHHHHHhhHHhHhhhcCCcccccccCcchhhHHHHh--hccchhhhHHhhhhhHHHH-HHHHH-------
Q psy18094 47 RKHPLSCWLSTMLVIFAGGMVAGGLLGEPILAPLKNTQQLVIATAA--SKFLPVKILFSGMKEIYRC-KKIHD------- 116 (260)
Q Consensus 47 r~~P~a~WlssmL~cFaG~iLs~~LLGep~l~~l~n~~~VlLAs~v--~~~lPvklv~~~mKEv~R~-~KI~~------- 116 (260)
+.+++.+.+.++....|||++=|.++|++|...++|...+.++... .-+.-.|.. +...|. -.+.|
T Consensus 26 ~~D~~Gv~vlg~vTa~GGG~iRDill~~~P~~~~~~~~y~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~DAiGLa~F 101 (207)
T PRK10578 26 RMDPFGVLVLGVVTAVGGGTIRDMALDNGPVFWVKDPTDLVVAMVTSMLTIVLVRQP----RRLPKWMLPVLDAVGLAVF 101 (207)
T ss_pred CCCchhhHHHHHHHHhhcHHHHHHHcCCCCceeecCccHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 3679999999999999999999999999998888888886555444 222222211 112222 22334
Q ss_pred ---HhhhhhhhCCCchhhHhhHhhcccCcccchHHHHHHHhcCCCCCcccccccCchhHHHHHHHHHHHHhhcCCccccc
Q psy18094 117 ---GVTHAAKLYPSAYIIMIIIGTLKGNGAGFIKLLERLIRGVWTPTAMEFMQPSFPTKSSIVASIIFVLDKKTDLISAP 193 (260)
Q Consensus 117 ---GV~~A~~~Yp~~~~v~iliG~~kGaG~~~~~~~eqLlrG~w~p~~~E~LkpS~~TK~sl~~silftL~~~~~~l~~~ 193 (260)
|...|. .+..++++.++.|++-|.|||+++- ++.|+ .-..+|..+..=+|++|+++|.+-.. ....+
T Consensus 102 ~v~Ga~~al-~~g~~~~~~i~~G~iTavgGGviRD---il~~~----iP~i~~~e~YAtaa~~G~~~y~~~~~--~~~~~ 171 (207)
T PRK10578 102 VGIGVNKAF-NAEAGPLVAVCMGVITGVGGGIIRD---VLARE----IPMILRTEIYATACIIGGIVHATAYY--TFSVP 171 (207)
T ss_pred HHHHHHHHH-HcCCCHHHHHHHHHHHhhhhHHHHH---HHhcC----CchhhcCcccHHHHHHHHHHHHHHHH--HcCCc
Confidence 344443 4557789999999999999999976 45554 23456778899999999999984321 12344
Q ss_pred cchHHHHHHHHHHHHHHHHHHhccCCCc
Q psy18094 194 HALVYFGIVIFFIYFKLSSILLGIHDPF 221 (260)
Q Consensus 194 ~~~v~~~~~~f~v~~K~~~~~~~~~~Pf 221 (260)
.+...+......+..++.++-++-+=|-
T Consensus 172 ~~~~~~~~~~~~~~lRl~ai~~~w~LP~ 199 (207)
T PRK10578 172 LETASMMGMVVTLLIRLAAIRWHLKLPT 199 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCccCCC
Confidence 4444443455666778888887777554
No 4
>COG2860 Predicted membrane protein [Function unknown]
Probab=96.66 E-value=0.057 Score=48.98 Aligned_cols=157 Identities=18% Similarity=0.297 Sum_probs=104.6
Q ss_pred cCchhHHHHHHHHHHhhHHhHhhhcCCcccccccCcchhhHHHHh--hccchhhhHHhhhhhHHHHHHHHH---------
Q psy18094 48 KHPLSCWLSTMLVIFAGGMVAGGLLGEPILAPLKNTQQLVIATAA--SKFLPVKILFSGMKEIYRCKKIHD--------- 116 (260)
Q Consensus 48 ~~P~a~WlssmL~cFaG~iLs~~LLGep~l~~l~n~~~VlLAs~v--~~~lPvklv~~~mKEv~R~~KI~~--------- 116 (260)
-++|---+-+-...+|||..=|.|+|.-|+.-++|...++++... .-+.-.+.+ ++-.++..-+.|
T Consensus 30 ~DifGv~~la~vTAiGGGtiRDlLLG~~Pv~wv~~p~yl~~~~~~a~~~~~~~~~~---~~~~~~~~~v~DAiGLaaFav 106 (209)
T COG2860 30 MDIFGVLILAVVTAIGGGTIRDLLLGHYPVFWVKHPEYLLIAAVAAVLTFFVAPLL---MRRFRKLLLVLDAIGLAAFAV 106 (209)
T ss_pred CCeeeehhHHHHHHhcchHHHHHHccCCCceeecCccHHHHHHHHHHHHHHHHHHH---HHHHHHHHhhhhHHHHHHHHH
Confidence 567888888889999999999999999999999999998777665 222222222 222222222222
Q ss_pred -HhhhhhhhCCCchhhHhhHhhcccCcccchHHHHHHHhcCCCCCcccccccCchhHHHHHHHHHHHHhhcCCccccccc
Q psy18094 117 -GVTHAAKLYPSAYIIMIIIGTLKGNGAGFIKLLERLIRGVWTPTAMEFMQPSFPTKSSIVASIIFVLDKKTDLISAPHA 195 (260)
Q Consensus 117 -GV~~A~~~Yp~~~~v~iliG~~kGaG~~~~~~~eqLlrG~w~p~~~E~LkpS~~TK~sl~~silftL~~~~~~l~~~~~ 195 (260)
|...|- .+.+++++.|+.|..-|+|||+++.+ +-| |....++..-..-+|++++.+|+.-. +...+++
T Consensus 107 ~Ga~~al-~~g~~p~~aiv~gvlTgvgGGvlRDv---la~----eiP~vlr~EiYAt~A~lg~~~~~~l~---~~~~~~~ 175 (209)
T COG2860 107 IGAQKAL-DAGHGPLIAVVAGVLTGVGGGVLRDV---LAG----EIPLVLRKEIYATAAILGAGLYIVLY---HLGLPHE 175 (209)
T ss_pred HHHHHHH-hcCCCchhhhhhhhhhcccchhHHHH---HcC----CCchhhhhhHHHHHHHHHHHHHHHHH---HhCCcHH
Confidence 333333 35678899999999999999998764 333 34556677788888999976666432 1255666
Q ss_pred hHHHHHHHHHHHHHHHHHHhccC
Q psy18094 196 LVYFGIVIFFIYFKLSSILLGIH 218 (260)
Q Consensus 196 ~v~~~~~~f~v~~K~~~~~~~~~ 218 (260)
+..+..++.-...++.+.-++-.
T Consensus 176 ~~~~~~~~~~~~lR~~air~~w~ 198 (209)
T COG2860 176 VAALIGLVVGFALRLLAIRFGWG 198 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCc
Confidence 66663333334566666666644
No 5
>PF03458 UPF0126: UPF0126 domain; InterPro: IPR005115 This domain is duplicated in bacterial membrane proteins of unknown function and each domain contains three transmembrane helices. The conserved glycines are suggestive of an ion channel.
Probab=83.76 E-value=2.5 Score=32.43 Aligned_cols=41 Identities=15% Similarity=0.215 Sum_probs=34.6
Q ss_pred cCchhHHHHHHHHHHhhHHhHhhhcCCcccccccCcchhhH
Q psy18094 48 KHPLSCWLSTMLVIFAGGMVAGGLLGEPILAPLKNTQQLVI 88 (260)
Q Consensus 48 ~~P~a~WlssmL~cFaG~iLs~~LLGep~l~~l~n~~~VlL 88 (260)
-+++.+-+..++...|||++=+.++|+.|....++...+..
T Consensus 25 ~d~~g~~~lg~iTa~GGG~lRDvll~~~P~~~~~~~~Y~~~ 65 (80)
T PF03458_consen 25 LDIFGAIVLGVITAVGGGILRDVLLGRTPVIFLRDEIYATA 65 (80)
T ss_pred CCcHHHHHHHHHHHhhcHHHHHHHcCCCChhhccCchHHHH
Confidence 57999999999999999999999999988877765555433
No 6
>PF05449 DUF754: Protein of unknown function (DUF754); InterPro: IPR008473 This entry is represented by Bacteriophage D3, Orf90. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=79.65 E-value=2.3 Score=33.38 Aligned_cols=47 Identities=23% Similarity=0.398 Sum_probs=39.7
Q ss_pred cccCchhHHHHHHHHHHhhHHhHhhhcC-CcccccccCcchhhHHHHh
Q psy18094 46 SRKHPLSCWLSTMLVIFAGGMVAGGLLG-EPILAPLKNTQQLVIATAA 92 (260)
Q Consensus 46 sr~~P~a~WlssmL~cFaG~iLs~~LLG-ep~l~~l~n~~~VlLAs~v 92 (260)
+|.+|..||+...+++..|++=-.+++| -++.++.+--.++++|.+|
T Consensus 22 arhr~~~s~lA~lli~~~~~~~i~~l~g~~~~~~~~~~~~n~~l~~~V 69 (83)
T PF05449_consen 22 ARHRPWISWLAYLLIVAYGSVPIRILFGHYPPASWAEVIINLLLCVAV 69 (83)
T ss_pred CccCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 4899999999999999999999999998 5566666666677777766
No 7
>COG2860 Predicted membrane protein [Function unknown]
Probab=63.93 E-value=14 Score=33.82 Aligned_cols=66 Identities=26% Similarity=0.324 Sum_probs=56.1
Q ss_pred cCchhHHHHHHHHHHhhHHhHhhhcCCcccccccCcchhhHHHHhhccchhhhHHhhhhhHHHHHHHHH-HhhhhhhhCC
Q psy18094 48 KHPLSCWLSTMLVIFAGGMVAGGLLGEPILAPLKNTQQLVIATAASKFLPVKILFSGMKEIYRCKKIHD-GVTHAAKLYP 126 (260)
Q Consensus 48 ~~P~a~WlssmL~cFaG~iLs~~LLGep~l~~l~n~~~VlLAs~v~~~lPvklv~~~mKEv~R~~KI~~-GV~~A~~~Yp 126 (260)
-+|+.+-++.++.--+||++-+.|.||+|+ ++- ||++=+.-+.+ |+-.+..+.+
T Consensus 117 ~~p~~aiv~gvlTgvgGGvlRDvla~eiP~-----------------------vlr--~EiYAt~A~lg~~~~~~l~~~~ 171 (209)
T COG2860 117 HGPLIAVVAGVLTGVGGGVLRDVLAGEIPL-----------------------VLR--KEIYATAAILGAGLYIVLYHLG 171 (209)
T ss_pred CCchhhhhhhhhhcccchhHHHHHcCCCch-----------------------hhh--hhHHHHHHHHHHHHHHHHHHhC
Confidence 689999999999999999999999999998 233 79999999888 7778888888
Q ss_pred CchhhHhhHhhc
Q psy18094 127 SAYIIMIIIGTL 138 (260)
Q Consensus 127 ~~~~v~iliG~~ 138 (260)
.+..+..++|.+
T Consensus 172 ~~~~~~~~~~~~ 183 (209)
T COG2860 172 LPHEVAALIGLV 183 (209)
T ss_pred CcHHHHHHHHHH
Confidence 887777777643
No 8
>PF03458 UPF0126: UPF0126 domain; InterPro: IPR005115 This domain is duplicated in bacterial membrane proteins of unknown function and each domain contains three transmembrane helices. The conserved glycines are suggestive of an ion channel.
Probab=52.66 E-value=35 Score=26.10 Aligned_cols=62 Identities=18% Similarity=0.401 Sum_probs=41.8
Q ss_pred HHhhhhhhhCCCchhhHhhHhhcccCcccchHHHHHHHhcCCCCCcccccccCchhHHHHHHHHHHHHh
Q psy18094 116 DGVTHAAKLYPSAYIIMIIIGTLKGNGAGFIKLLERLIRGVWTPTAMEFMQPSFPTKSSIVASIIFVLD 184 (260)
Q Consensus 116 ~GV~~A~~~Yp~~~~v~iliG~~kGaG~~~~~~~eqLlrG~w~p~~~E~LkpS~~TK~sl~~silftL~ 184 (260)
.|+..|.+. ...++..+++|++-|.|||++|. ++.|+ .|- -+.+-....=+++++++++.+-
T Consensus 15 ~Ga~~A~~~-~~d~~g~~~lg~iTa~GGG~lRD---vll~~-~P~--~~~~~~~Y~~~a~~g~~~~~~~ 76 (80)
T PF03458_consen 15 SGALKALRA-GLDIFGAIVLGVITAVGGGILRD---VLLGR-TPV--IFLRDEIYATAAIIGALAYFIF 76 (80)
T ss_pred HHHHHHHHc-CCCcHHHHHHHHHHHhhcHHHHH---HHcCC-CCh--hhccCchHHHHHHHHHHHHHHH
Confidence 455666554 45689999999999999999987 56666 222 2223235556777777777654
No 9
>PF02426 MIase: Muconolactone delta-isomerase; InterPro: IPR003464 This small enzyme forms a homodecameric complex, that catalyses the third step in the catabolism of catechol to succinate- and acetyl-coa in the beta-ketoadipate pathway (5.3.3.4 from EC). The protein has a ferredoxin-like fold according to SCOP.; GO: 0006725 cellular aromatic compound metabolic process
Probab=46.06 E-value=9 Score=30.56 Aligned_cols=23 Identities=30% Similarity=0.593 Sum_probs=19.0
Q ss_pred ChhHHHHHHHHhhcccCchhhhh
Q psy18094 2 DPEAFLDLANQVMKLKMYPYFDV 24 (260)
Q Consensus 2 d~~~~~~~a~~~~~l~mfP~Fdi 24 (260)
|.+.-+||-..+++||+|||-|+
T Consensus 57 dv~d~~eLh~lL~sLPL~p~m~i 79 (91)
T PF02426_consen 57 DVEDNDELHELLSSLPLFPYMDI 79 (91)
T ss_pred ECCCHHHHHHHHHhCCCccceee
Confidence 55666788888999999999876
No 10
>TIGR03221 muco_delta muconolactone delta-isomerase. Members of this protein family are muconolactone delta-isomerase (EC 5.3.3.4), the CatC protein of the ortho cleavage pathway for metabolizing aromatic compounds by way of catechol.
Probab=44.06 E-value=9.6 Score=30.54 Aligned_cols=23 Identities=30% Similarity=0.590 Sum_probs=19.0
Q ss_pred ChhHHHHHHHHhhcccCchhhhh
Q psy18094 2 DPEAFLDLANQVMKLKMYPYFDV 24 (260)
Q Consensus 2 d~~~~~~~a~~~~~l~mfP~Fdi 24 (260)
|.+.=+||-.-++.||+|||.+|
T Consensus 56 dv~s~~eLh~iL~sLPL~p~m~i 78 (90)
T TIGR03221 56 DVESNDELHTLLSGLPLFPYMDI 78 (90)
T ss_pred EcCCHHHHHHHHHhCCCCcceEe
Confidence 55666788889999999999776
No 11
>PF09622 DUF2391: Putative integral membrane protein (DUF2391); InterPro: IPR024464 Members of this protein family are found in archaea and bacteria. Their function is unknown.
Probab=23.68 E-value=1.1e+02 Score=28.95 Aligned_cols=44 Identities=16% Similarity=0.030 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhccCCCchhhhhhhhhhhccchhhhhhhhhhc
Q psy18094 203 IFFIYFKLSSILLGIHDPFIPFENLGCALFFGGIWDSLSRMFGR 246 (260)
Q Consensus 203 ~f~v~~K~~~~~~~~~~Pf~p~En~l~~~~fG~~~~~~~~~~~~ 246 (260)
+-+++.-+.+.+++.-++..|....++++.+=....++--++.|
T Consensus 74 ig~v~a~~~L~~l~~l~~~~~~~e~lgkiiv~~vP~siGa~la~ 117 (267)
T PF09622_consen 74 IGAVVAAAVLTLLGKLTLDTPPREALGKIIVQSVPASIGAALAR 117 (267)
T ss_pred HHHHHHHHHHHHHhhCCCCCCHHHHhHhheeeEecHHHHHHHHH
Confidence 33445566677888778999999999999994444444444444
No 12
>COG4829 CatC1 Muconolactone delta-isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.73 E-value=43 Score=27.10 Aligned_cols=23 Identities=13% Similarity=0.261 Sum_probs=19.0
Q ss_pred ChhHHHHHHHHhhcccCchhhhh
Q psy18094 2 DPEAFLDLANQVMKLKMYPYFDV 24 (260)
Q Consensus 2 d~~~~~~~a~~~~~l~mfP~Fdi 24 (260)
|...-+|+-+.++++|+|||-++
T Consensus 57 d~dd~~eLh~~L~~~P~f~ym~~ 79 (98)
T COG4829 57 DADDNGELHQLLASMPPFSYMTD 79 (98)
T ss_pred cCCchHHHHHHHhcCCCcccccc
Confidence 44556788899999999999876
Done!