Query psy18096
Match_columns 131
No_of_seqs 179 out of 1901
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 22:28:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18096.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18096hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2if4_A ATFKBP42; FKBP-like, al 99.9 1.6E-23 5.5E-28 153.1 13.0 130 1-130 109-276 (338)
2 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 7.4E-23 2.5E-27 154.9 13.2 130 1-130 202-363 (457)
3 1p5q_A FKBP52, FK506-binding p 99.9 1.6E-22 5.6E-27 147.6 13.9 130 1-130 81-242 (336)
4 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 3.3E-16 1.1E-20 118.4 6.4 129 1-130 90-329 (457)
5 3rkv_A Putative peptidylprolyl 99.5 2E-13 7E-18 88.9 9.3 63 68-130 27-109 (162)
6 4gco_A Protein STI-1; structur 99.5 2.7E-13 9.4E-18 85.7 9.5 63 68-130 29-93 (126)
7 2hr2_A Hypothetical protein; a 99.5 5E-13 1.7E-17 88.2 9.1 63 68-130 27-114 (159)
8 2f4e_A ATFKBP42; FKBP-like, al 99.4 2.6E-13 8.7E-18 91.4 4.3 67 1-67 109-179 (180)
9 2fbn_A 70 kDa peptidylprolyl i 99.4 4.6E-12 1.6E-16 84.9 9.6 91 40-130 11-134 (198)
10 3upv_A Heat shock protein STI1 99.3 9.7E-12 3.3E-16 77.5 9.2 63 68-130 20-84 (126)
11 3gyz_A Chaperone protein IPGC; 99.3 6.9E-12 2.4E-16 81.9 8.7 63 68-130 52-116 (151)
12 4gcn_A Protein STI-1; structur 99.3 5.3E-12 1.8E-16 79.7 6.5 62 68-129 24-94 (127)
13 2l6j_A TPR repeat-containing p 99.2 6.6E-11 2.2E-15 71.5 8.4 62 68-129 20-89 (111)
14 3kz7_A FK506-binding protein 3 99.2 4.6E-12 1.6E-16 79.7 3.2 50 1-50 70-119 (119)
15 4gco_A Protein STI-1; structur 99.2 2.8E-11 9.4E-16 76.4 6.6 61 68-128 63-125 (126)
16 3sz7_A HSC70 cochaperone (SGT) 99.2 1.7E-10 5.7E-15 75.1 10.0 63 68-130 27-91 (164)
17 4ga2_A E3 SUMO-protein ligase 99.2 1.1E-10 3.8E-15 75.5 8.5 62 68-129 47-110 (150)
18 2d9f_A FK506-binding protein 8 99.2 2.4E-11 8.3E-16 78.1 4.6 60 1-60 73-132 (135)
19 2xcb_A PCRH, regulatory protei 99.1 3.3E-10 1.1E-14 72.2 9.1 63 68-130 34-98 (142)
20 3o5e_A Peptidyl-prolyl CIS-tra 99.1 2.5E-11 8.6E-16 78.9 3.8 49 1-50 94-142 (144)
21 2vgx_A Chaperone SYCD; alterna 99.1 2.1E-10 7.2E-15 74.1 8.2 63 68-130 37-101 (148)
22 4dip_A Peptidyl-prolyl CIS-tra 99.1 3E-11 1E-15 76.6 4.0 50 1-52 75-124 (125)
23 1ihg_A Cyclophilin 40; ppiase 99.1 4.8E-10 1.6E-14 82.8 11.0 63 68-130 239-319 (370)
24 3q49_B STIP1 homology and U bo 99.1 8E-10 2.7E-14 69.1 9.7 63 68-130 25-89 (137)
25 1jvw_A Macrophage infectivity 99.1 9.6E-11 3.3E-15 77.9 5.5 59 1-62 94-152 (167)
26 2pbc_A FK506-binding protein 2 99.1 6.1E-11 2.1E-15 72.6 4.1 51 1-52 49-99 (102)
27 3o5q_A Peptidyl-prolyl CIS-tra 99.1 5.4E-11 1.9E-15 75.8 3.8 49 1-50 78-126 (128)
28 3b7x_A FK506-binding protein 6 99.1 4.3E-11 1.5E-15 76.8 3.1 49 1-50 85-133 (134)
29 2ppn_A FK506-binding protein 1 99.1 7.8E-11 2.7E-15 72.7 4.0 48 1-49 59-106 (107)
30 2vn1_A 70 kDa peptidylprolyl i 99.1 8.2E-11 2.8E-15 75.0 4.2 50 1-51 78-127 (129)
31 2jwx_A FKBP38NTD, FK506-bindin 99.1 8.8E-11 3E-15 77.3 4.3 53 1-53 99-151 (157)
32 2awg_A 38 kDa FK-506 binding p 99.1 8.5E-11 2.9E-15 73.8 4.1 49 1-50 69-117 (118)
33 1hxi_A PEX5, peroxisome target 99.1 8.5E-10 2.9E-14 68.9 8.6 62 68-129 33-96 (121)
34 1q1c_A FK506-binding protein 4 99.1 5.9E-11 2E-15 84.9 3.5 57 1-57 224-280 (280)
35 1zu2_A Mitochondrial import re 99.1 3.8E-10 1.3E-14 74.3 6.7 62 68-129 18-91 (158)
36 1yat_A FK506 binding protein; 99.1 1.2E-10 4.1E-15 72.6 4.1 48 1-49 65-112 (113)
37 3k9i_A BH0479 protein; putativ 99.1 3.9E-10 1.3E-14 69.6 6.2 62 68-129 6-72 (117)
38 4ga2_A E3 SUMO-protein ligase 99.0 7.2E-10 2.5E-14 71.6 7.6 63 68-130 13-77 (150)
39 3urz_A Uncharacterized protein 99.0 1E-09 3.5E-14 74.3 8.5 62 68-129 70-133 (208)
40 2lgo_A FKBP; infectious diseas 99.0 1.7E-10 5.8E-15 73.7 4.3 48 1-49 83-130 (130)
41 2y78_A Peptidyl-prolyl CIS-tra 99.0 1.4E-10 4.7E-15 74.5 3.8 48 1-49 86-133 (133)
42 1na3_A Designed protein CTPR2; 99.0 2E-09 6.7E-14 62.6 8.5 63 68-130 25-89 (91)
43 3oe2_A Peptidyl-prolyl CIS-tra 99.0 1.5E-10 5.2E-15 79.9 3.9 49 1-50 170-218 (219)
44 1r9h_A FKB-6, FK506 binding pr 99.0 1.8E-10 6.1E-15 74.0 3.9 51 1-52 73-123 (135)
45 2c2l_A CHIP, carboxy terminus 99.0 1.7E-09 5.7E-14 76.7 9.1 63 68-130 20-84 (281)
46 3urz_A Uncharacterized protein 99.0 3.1E-09 1.1E-13 71.9 10.0 63 68-130 20-100 (208)
47 3jxv_A 70 kDa peptidyl-prolyl 99.0 3.6E-10 1.2E-14 83.3 4.1 51 1-51 182-236 (356)
48 1fd9_A Protein (macrophage inf 99.0 5.6E-10 1.9E-14 76.9 4.5 50 1-51 162-211 (213)
49 3uf8_A Ubiquitin-like protein 98.9 4.8E-10 1.6E-14 77.0 3.8 48 1-49 162-209 (209)
50 2kc7_A BFR218_protein; tetratr 98.9 6.6E-09 2.3E-13 61.7 8.0 56 68-123 16-74 (99)
51 2dba_A Smooth muscle cell asso 98.9 1.4E-08 4.9E-13 63.7 10.0 62 68-129 44-110 (148)
52 2kck_A TPR repeat; tetratricop 98.9 9.3E-09 3.2E-13 61.4 8.4 63 68-130 22-88 (112)
53 2h6f_A Protein farnesyltransfe 98.9 3.2E-09 1.1E-13 78.7 7.4 62 68-129 113-177 (382)
54 1elw_A TPR1-domain of HOP; HOP 98.9 1.1E-08 3.8E-13 61.5 8.5 62 68-129 20-83 (118)
55 3sz7_A HSC70 cochaperone (SGT) 98.9 3.8E-09 1.3E-13 68.5 6.5 62 68-129 61-124 (164)
56 3vtx_A MAMA; tetratricopeptide 98.9 1.2E-08 4.1E-13 66.9 8.5 63 68-130 89-153 (184)
57 1q6h_A FKBP-type peptidyl-prol 98.9 1.5E-09 5.2E-14 75.2 4.0 47 1-49 177-223 (224)
58 2h6f_A Protein farnesyltransfe 98.9 7E-09 2.4E-13 76.9 7.8 62 68-129 148-211 (382)
59 4i17_A Hypothetical protein; T 98.9 1.8E-08 6.3E-13 68.2 9.3 63 68-130 23-88 (228)
60 2pl2_A Hypothetical conserved 98.9 1.2E-08 3.9E-13 69.5 8.1 62 68-129 21-84 (217)
61 2lni_A Stress-induced-phosphop 98.8 2.1E-08 7.1E-13 61.7 8.5 62 68-129 66-129 (133)
62 4gyw_A UDP-N-acetylglucosamine 98.8 1.4E-08 4.8E-13 80.9 8.9 62 68-129 59-122 (723)
63 3ma5_A Tetratricopeptide repea 98.8 9.3E-09 3.2E-13 61.9 6.2 48 68-115 23-72 (100)
64 2kat_A Uncharacterized protein 98.8 1.8E-08 6.1E-13 61.6 7.6 59 71-129 4-64 (115)
65 1a17_A Serine/threonine protei 98.8 2.5E-08 8.6E-13 63.7 8.6 62 68-129 29-92 (166)
66 2xev_A YBGF; tetratricopeptide 98.8 2.2E-08 7.5E-13 61.8 7.8 62 68-129 18-87 (129)
67 2vyi_A SGTA protein; chaperone 98.8 3.8E-08 1.3E-12 60.0 8.5 61 68-128 62-124 (131)
68 1p5q_A FKBP52, FK506-binding p 98.8 2.2E-08 7.4E-13 72.7 8.5 62 68-129 212-275 (336)
69 1wao_1 Serine/threonine protei 98.8 2.1E-08 7.2E-13 76.2 8.5 62 68-129 22-85 (477)
70 3mkr_A Coatomer subunit epsilo 98.8 2.3E-08 8E-13 71.2 8.2 62 68-129 182-245 (291)
71 4gyw_A UDP-N-acetylglucosamine 98.8 1E-08 3.5E-13 81.7 6.9 62 68-129 93-156 (723)
72 2pl2_A Hypothetical conserved 98.8 1.5E-08 5.3E-13 68.8 6.7 62 68-129 55-129 (217)
73 1q1c_A FK506-binding protein 4 98.8 4.3E-09 1.5E-13 75.3 3.9 50 1-51 110-159 (280)
74 2lni_A Stress-induced-phosphop 98.8 4E-08 1.4E-12 60.4 7.6 63 68-130 32-96 (133)
75 1u79_A FKBP-type peptidyl-prol 98.8 1.4E-09 4.8E-14 69.3 0.8 45 5-49 80-128 (129)
76 3rkv_A Putative peptidylprolyl 98.7 4.4E-08 1.5E-12 63.3 7.9 53 68-120 79-133 (162)
77 4gcn_A Protein STI-1; structur 98.7 3.5E-08 1.2E-12 61.9 7.2 50 81-130 5-54 (127)
78 1zu2_A Mitochondrial import re 98.7 3.3E-08 1.1E-12 65.0 6.9 57 68-126 62-131 (158)
79 1elr_A TPR2A-domain of HOP; HO 98.7 3.3E-08 1.1E-12 60.4 6.5 63 68-130 20-91 (131)
80 4i17_A Hypothetical protein; T 98.7 7.9E-08 2.7E-12 65.1 8.5 62 68-129 58-128 (228)
81 2vyi_A SGTA protein; chaperone 98.7 1.1E-07 3.9E-12 57.9 8.5 63 68-130 28-92 (131)
82 2v5f_A Prolyl 4-hydroxylase su 98.7 1.4E-07 4.8E-12 57.3 8.8 68 58-125 3-87 (104)
83 3upv_A Heat shock protein STI1 98.7 6.2E-08 2.1E-12 59.9 7.3 62 68-129 54-123 (126)
84 3fp2_A TPR repeat-containing p 98.7 3.9E-08 1.3E-12 73.8 7.2 63 68-130 41-105 (537)
85 2hr2_A Hypothetical protein; a 98.7 2E-08 7E-13 66.1 4.9 50 68-117 73-135 (159)
86 3gyz_A Chaperone protein IPGC; 98.7 5.2E-08 1.8E-12 63.3 6.8 53 78-130 30-82 (151)
87 3vtx_A MAMA; tetratricopeptide 98.7 1.2E-07 4E-12 62.1 8.6 62 68-129 21-84 (184)
88 1hh8_A P67PHOX, NCF-2, neutrop 98.7 8.7E-08 3E-12 63.9 8.1 62 68-129 53-132 (213)
89 3jxv_A 70 kDa peptidyl-prolyl 98.7 7.7E-09 2.6E-13 76.2 3.0 51 1-51 304-355 (356)
90 1hh8_A P67PHOX, NCF-2, neutrop 98.7 7E-08 2.4E-12 64.4 7.6 62 68-130 22-83 (213)
91 2fbn_A 70 kDa peptidylprolyl i 98.7 1.1E-07 3.8E-12 63.3 8.5 62 68-129 104-167 (198)
92 1elw_A TPR1-domain of HOP; HOP 98.7 1.6E-07 5.5E-12 56.2 8.5 61 68-128 54-116 (118)
93 3uq3_A Heat shock protein STI1 98.7 1.1E-07 3.8E-12 64.5 8.5 63 68-130 155-219 (258)
94 2lkn_A AH receptor-interacting 98.7 5E-09 1.7E-13 69.3 1.1 54 1-54 72-161 (165)
95 1pc2_A Mitochondria fission pr 98.6 1.4E-07 5E-12 61.5 7.9 57 68-124 51-111 (152)
96 2pzi_A Probable serine/threoni 98.6 1.4E-07 4.9E-12 74.4 9.1 62 68-129 449-512 (681)
97 2yhc_A BAMD, UPF0169 lipoprote 98.6 2E-07 7E-12 63.4 8.7 62 68-129 20-89 (225)
98 1na0_A Designed protein CTPR3; 98.6 3.3E-07 1.1E-11 55.3 8.5 62 68-129 59-122 (125)
99 1na0_A Designed protein CTPR3; 98.6 3.3E-07 1.1E-11 55.2 8.5 63 68-130 25-89 (125)
100 2gw1_A Mitochondrial precursor 98.6 1.5E-07 5.2E-12 70.0 8.3 62 68-130 22-85 (514)
101 2vsy_A XCC0866; transferase, g 98.6 2.9E-07 9.8E-12 70.7 9.4 62 68-129 39-102 (568)
102 1xnf_A Lipoprotein NLPI; TPR, 98.6 2.1E-07 7.1E-12 63.9 7.9 63 68-130 59-123 (275)
103 2e2e_A Formate-dependent nitri 98.6 2.7E-07 9.2E-12 60.1 8.0 63 68-130 60-127 (177)
104 2xcb_A PCRH, regulatory protei 98.6 8.8E-08 3E-12 60.7 5.5 59 68-126 68-128 (142)
105 2y4t_A DNAJ homolog subfamily 98.6 7.7E-08 2.6E-12 70.8 5.8 63 68-130 42-106 (450)
106 4eqf_A PEX5-related protein; a 98.6 5.7E-07 2E-11 64.6 10.2 63 68-130 81-145 (365)
107 2vgx_A Chaperone SYCD; alterna 98.6 1.3E-07 4.6E-12 60.7 6.2 53 68-120 71-125 (148)
108 3k9i_A BH0479 protein; putativ 98.6 2.7E-07 9.1E-12 56.6 7.3 55 68-122 43-99 (117)
109 2dba_A Smooth muscle cell asso 98.6 4.3E-07 1.5E-11 56.8 8.3 61 68-128 81-143 (148)
110 1ihg_A Cyclophilin 40; ppiase 98.6 2.6E-07 9E-12 68.0 8.2 62 68-129 289-352 (370)
111 3qky_A Outer membrane assembly 98.5 5.1E-07 1.7E-11 62.4 9.1 63 68-130 31-101 (261)
112 4abn_A Tetratricopeptide repea 98.5 3.6E-07 1.2E-11 69.1 8.8 62 68-129 237-303 (474)
113 3ieg_A DNAJ homolog subfamily 98.5 5.8E-07 2E-11 63.5 9.3 62 68-129 19-82 (359)
114 1a17_A Serine/threonine protei 98.5 5.9E-07 2E-11 57.2 8.5 60 68-127 63-124 (166)
115 4eqf_A PEX5-related protein; a 98.5 4.2E-07 1.4E-11 65.3 8.5 62 68-129 229-292 (365)
116 2l6j_A TPR repeat-containing p 98.5 3.5E-07 1.2E-11 54.6 6.5 48 83-130 3-50 (111)
117 3ma5_A Tetratricopeptide repea 98.5 1E-07 3.5E-12 57.2 3.7 51 80-130 3-53 (100)
118 1fch_A Peroxisomal targeting s 98.5 6.1E-07 2.1E-11 64.2 8.4 63 68-130 80-144 (368)
119 3u4t_A TPR repeat-containing p 98.5 3.1E-07 1.1E-11 63.1 6.4 61 68-128 90-153 (272)
120 1xnf_A Lipoprotein NLPI; TPR, 98.5 9.9E-07 3.4E-11 60.5 8.9 63 68-130 21-89 (275)
121 1fch_A Peroxisomal targeting s 98.5 8.1E-07 2.8E-11 63.5 8.5 62 68-129 233-296 (368)
122 2pzi_A Probable serine/threoni 98.5 1.6E-07 5.3E-12 74.2 5.1 61 68-129 483-545 (681)
123 3uq3_A Heat shock protein STI1 98.4 1.2E-06 4.2E-11 59.2 8.9 52 79-130 134-185 (258)
124 1w3b_A UDP-N-acetylglucosamine 98.4 5.4E-07 1.9E-11 65.3 7.4 62 68-129 321-384 (388)
125 2e2e_A Formate-dependent nitri 98.4 1.8E-07 6E-12 61.0 4.3 60 68-127 26-87 (177)
126 1hxi_A PEX5, peroxisome target 98.4 2.4E-07 8.2E-12 57.5 4.6 52 68-119 67-120 (121)
127 1na3_A Designed protein CTPR2; 98.4 9E-07 3.1E-11 51.0 6.8 49 82-130 7-55 (91)
128 2fo7_A Synthetic consensus TPR 98.4 1.5E-06 5.1E-11 52.7 8.2 63 68-130 51-115 (136)
129 2if4_A ATFKBP42; FKBP-like, al 98.4 1.7E-07 5.6E-12 68.1 4.3 60 68-127 246-307 (338)
130 3hym_B Cell division cycle pro 98.4 5.5E-07 1.9E-11 63.2 6.7 61 68-128 252-314 (330)
131 2q7f_A YRRB protein; TPR, prot 98.4 1.6E-06 5.5E-11 58.3 8.6 62 68-129 73-136 (243)
132 3as5_A MAMA; tetratricopeptide 98.4 1.9E-06 6.4E-11 55.3 8.5 61 68-128 92-154 (186)
133 2vq2_A PILW, putative fimbrial 98.4 1.9E-06 6.6E-11 57.1 8.7 62 68-129 24-87 (225)
134 3as5_A MAMA; tetratricopeptide 98.4 2.1E-06 7E-11 55.1 8.5 63 68-130 58-122 (186)
135 2fo7_A Synthetic consensus TPR 98.4 3E-06 1E-10 51.4 8.7 63 68-130 17-81 (136)
136 4abn_A Tetratricopeptide repea 98.4 6.3E-07 2.1E-11 67.8 6.6 63 68-130 195-270 (474)
137 1wao_1 Serine/threonine protei 98.4 9.3E-07 3.2E-11 67.1 7.5 60 68-127 56-117 (477)
138 2xev_A YBGF; tetratricopeptide 98.4 2.8E-06 9.6E-11 52.0 8.4 58 68-125 55-117 (129)
139 3cv0_A Peroxisome targeting si 98.4 3.7E-06 1.3E-10 58.8 10.0 62 68-129 37-100 (327)
140 1elr_A TPR2A-domain of HOP; HO 98.4 4.3E-06 1.5E-10 50.7 8.8 60 68-128 54-122 (131)
141 1w3b_A UDP-N-acetylglucosamine 98.3 1.8E-06 6.2E-11 62.5 8.2 62 68-129 151-214 (388)
142 2vsy_A XCC0866; transferase, g 98.3 1.9E-06 6.4E-11 66.1 8.5 63 68-130 73-137 (568)
143 2q7f_A YRRB protein; TPR, prot 98.3 2.7E-06 9.1E-11 57.3 8.2 62 68-129 107-170 (243)
144 3ieg_A DNAJ homolog subfamily 98.3 2.9E-06 1E-10 59.9 8.5 62 68-129 136-199 (359)
145 3cv0_A Peroxisome targeting si 98.3 3.7E-06 1.3E-10 58.8 8.5 63 68-130 188-252 (327)
146 2r5s_A Uncharacterized protein 98.3 3.8E-06 1.3E-10 54.9 7.9 60 70-129 92-155 (176)
147 2vq2_A PILW, putative fimbrial 98.3 4.4E-06 1.5E-10 55.3 8.2 42 85-126 114-155 (225)
148 2xpi_A Anaphase-promoting comp 98.3 2.9E-06 9.7E-11 64.6 8.0 63 68-130 532-596 (597)
149 3qky_A Outer membrane assembly 98.3 2.6E-06 8.9E-11 58.8 7.0 62 68-129 113-196 (261)
150 2kat_A Uncharacterized protein 98.3 4E-06 1.4E-10 50.8 7.0 50 68-117 35-86 (115)
151 2ho1_A Type 4 fimbrial biogene 98.3 5.8E-06 2E-10 56.1 8.5 61 68-128 87-151 (252)
152 3u3w_A Transcriptional activat 98.2 2.3E-06 7.8E-11 60.3 6.6 63 68-130 171-248 (293)
153 3u4t_A TPR repeat-containing p 98.2 4.3E-06 1.5E-10 57.3 7.7 63 68-130 53-120 (272)
154 3q49_B STIP1 homology and U bo 98.2 3.2E-06 1.1E-10 52.3 6.4 51 80-130 5-55 (137)
155 2ho1_A Type 4 fimbrial biogene 98.2 3E-06 1E-10 57.6 6.8 63 68-130 53-117 (252)
156 1nzn_A CGI-135 protein, fissio 98.2 6.2E-06 2.1E-10 52.1 7.5 57 68-124 54-114 (126)
157 1dce_A Protein (RAB geranylger 98.2 3.6E-06 1.2E-10 65.3 7.8 62 68-129 89-154 (567)
158 1qqe_A Vesicular transport pro 98.2 5.7E-06 1.9E-10 58.4 8.2 63 68-130 134-211 (292)
159 3hym_B Cell division cycle pro 98.2 6.1E-06 2.1E-10 57.8 8.0 62 68-129 141-204 (330)
160 2r5s_A Uncharacterized protein 98.2 5.2E-06 1.8E-10 54.2 7.1 54 68-122 22-77 (176)
161 2y4t_A DNAJ homolog subfamily 98.2 6.7E-06 2.3E-10 60.3 8.4 58 68-125 311-370 (450)
162 4g1t_A Interferon-induced prot 98.2 4.4E-06 1.5E-10 61.9 7.2 62 68-129 229-292 (472)
163 2kc7_A BFR218_protein; tetratr 98.2 5E-06 1.7E-10 48.9 6.1 44 87-130 3-47 (99)
164 2kck_A TPR repeat; tetratricop 98.2 9.4E-07 3.2E-11 52.4 2.9 51 80-130 2-52 (112)
165 1dce_A Protein (RAB geranylger 98.1 6.3E-06 2.1E-10 64.0 7.6 62 68-129 45-118 (567)
166 3qou_A Protein YBBN; thioredox 98.1 1E-05 3.4E-10 57.2 7.9 52 78-129 213-266 (287)
167 3o48_A Mitochondria fission 1 98.1 1.7E-05 5.8E-10 50.4 7.8 56 68-123 59-117 (134)
168 3fp2_A TPR repeat-containing p 98.1 7.7E-06 2.6E-10 61.2 7.3 62 68-129 292-355 (537)
169 3dra_A Protein farnesyltransfe 98.1 1E-05 3.6E-10 58.3 7.2 61 68-128 49-113 (306)
170 2yhc_A BAMD, UPF0169 lipoprote 98.1 1.3E-05 4.3E-10 54.4 7.2 63 68-130 112-196 (225)
171 3edt_B KLC 2, kinesin light ch 98.0 1.3E-05 4.5E-10 54.6 6.7 62 68-129 101-180 (283)
172 1y8m_A FIS1; mitochondria, unk 98.0 1.9E-05 6.4E-10 50.8 6.7 56 68-123 58-116 (144)
173 3dra_A Protein farnesyltransfe 98.0 2.1E-05 7.3E-10 56.7 7.8 62 68-129 126-191 (306)
174 3dss_A Geranylgeranyl transfer 98.0 2.7E-05 9.4E-10 56.8 8.4 61 68-128 90-154 (331)
175 3ulq_A Response regulator aspa 98.0 2.4E-05 8.3E-10 56.8 7.9 63 68-130 200-276 (383)
176 2qfc_A PLCR protein; TPR, HTH, 98.0 1.7E-05 5.7E-10 55.8 6.6 63 68-130 171-248 (293)
177 2ond_A Cleavage stimulation fa 98.0 3.2E-05 1.1E-09 54.8 8.0 61 69-129 81-145 (308)
178 4g1t_A Interferon-induced prot 98.0 3.8E-05 1.3E-09 56.8 8.6 62 68-129 67-147 (472)
179 3q7a_A Farnesyltransferase alp 98.0 3.6E-05 1.2E-09 56.5 8.3 62 68-129 70-134 (349)
180 1qqe_A Vesicular transport pro 98.0 2.5E-05 8.4E-10 55.1 7.1 63 68-130 93-170 (292)
181 3q15_A PSP28, response regulat 98.0 2.6E-05 9.1E-10 56.6 7.4 63 68-130 198-273 (378)
182 3edt_B KLC 2, kinesin light ch 98.0 2.6E-05 9.1E-10 53.1 7.0 63 68-130 59-139 (283)
183 3dss_A Geranylgeranyl transfer 97.9 4.5E-05 1.5E-09 55.6 8.4 62 68-129 126-190 (331)
184 2ifu_A Gamma-SNAP; membrane fu 97.9 3E-05 1E-09 55.0 7.0 62 68-129 131-206 (307)
185 2c2l_A CHIP, carboxy terminus 97.9 3.1E-05 1E-09 54.5 6.4 49 82-130 2-50 (281)
186 2gw1_A Mitochondrial precursor 97.9 2.5E-05 8.7E-10 57.9 6.2 63 68-130 388-461 (514)
187 3q7a_A Farnesyltransferase alp 97.9 4.9E-05 1.7E-09 55.8 7.6 62 68-129 105-170 (349)
188 2xpi_A Anaphase-promoting comp 97.9 5.1E-05 1.7E-09 57.7 8.0 61 68-128 389-451 (597)
189 3qou_A Protein YBBN; thioredox 97.8 3.1E-05 1.1E-09 54.6 6.1 45 68-112 133-179 (287)
190 3ro3_A PINS homolog, G-protein 97.8 8.1E-05 2.8E-09 46.3 6.8 30 85-114 50-79 (164)
191 1ouv_A Conserved hypothetical 97.8 0.00014 4.6E-09 50.2 8.4 59 68-128 22-84 (273)
192 3nf1_A KLC 1, kinesin light ch 97.8 8E-05 2.7E-09 51.5 6.9 62 68-129 127-206 (311)
193 3nf1_A KLC 1, kinesin light ch 97.7 0.0001 3.6E-09 50.9 7.2 46 68-113 169-224 (311)
194 2ond_A Cleavage stimulation fa 97.7 0.00017 5.9E-09 51.0 8.3 61 69-129 33-110 (308)
195 3rjv_A Putative SEL1 repeat pr 97.7 0.00019 6.5E-09 48.3 7.9 61 68-129 105-173 (212)
196 3gw4_A Uncharacterized protein 97.7 0.00014 4.6E-09 47.5 6.9 62 68-129 42-118 (203)
197 3rjv_A Putative SEL1 repeat pr 97.7 8.6E-05 2.9E-09 50.0 5.9 62 68-129 69-136 (212)
198 1hxv_A Trigger factor; FKBP fo 97.7 1.7E-05 5.7E-10 49.2 2.0 42 1-49 70-112 (113)
199 4a1s_A PINS, partner of inscut 97.6 8.4E-05 2.9E-09 53.9 5.7 62 68-129 64-137 (411)
200 1ouv_A Conserved hypothetical 97.6 0.00032 1.1E-08 48.3 8.4 60 68-129 166-229 (273)
201 3ulq_A Response regulator aspa 97.6 0.00014 4.8E-09 52.7 6.8 63 68-130 159-236 (383)
202 3bee_A Putative YFRE protein; 97.6 0.00017 5.7E-09 42.9 5.9 50 68-117 25-76 (93)
203 3ro3_A PINS homolog, G-protein 97.6 0.00021 7.3E-09 44.3 6.8 62 68-129 65-140 (164)
204 3bee_A Putative YFRE protein; 97.6 0.00022 7.6E-09 42.3 6.4 51 80-130 2-55 (93)
205 4a1s_A PINS, partner of inscut 97.6 0.00015 5.1E-09 52.5 6.6 62 68-129 102-177 (411)
206 2qfc_A PLCR protein; TPR, HTH, 97.6 0.00037 1.3E-08 48.8 8.4 63 68-130 131-208 (293)
207 3mkr_A Coatomer subunit epsilo 97.6 0.00024 8.2E-09 50.2 7.1 54 68-121 216-272 (291)
208 3u3w_A Transcriptional activat 97.6 0.00014 4.9E-09 51.0 5.8 63 68-130 131-208 (293)
209 3ro2_A PINS homolog, G-protein 97.5 0.00016 5.4E-09 50.2 5.8 62 68-129 59-134 (338)
210 3qww_A SET and MYND domain-con 97.5 0.00026 8.8E-09 53.3 7.0 62 68-129 314-393 (433)
211 3sf4_A G-protein-signaling mod 97.5 0.00026 8.8E-09 50.8 6.8 62 68-129 203-278 (406)
212 3sf4_A G-protein-signaling mod 97.5 0.0002 6.9E-09 51.3 5.8 62 68-129 63-138 (406)
213 1klx_A Cysteine rich protein B 97.5 0.001 3.4E-08 41.9 8.4 60 68-129 41-104 (138)
214 2ifu_A Gamma-SNAP; membrane fu 97.4 0.0002 6.8E-09 50.8 5.4 46 83-129 115-166 (307)
215 3ro2_A PINS homolog, G-protein 97.4 0.0005 1.7E-08 47.6 6.8 62 68-129 199-274 (338)
216 3pr9_A FKBP-type peptidyl-prol 97.4 4.5E-05 1.5E-09 49.9 1.2 29 1-29 57-85 (157)
217 3cgm_A SLYD, peptidyl-prolyl C 97.3 0.00014 4.9E-09 47.6 2.8 28 1-28 40-67 (158)
218 1ix5_A FKBP; ppiase, isomerase 97.2 9.3E-05 3.2E-09 48.1 1.5 29 1-29 58-86 (151)
219 3n71_A Histone lysine methyltr 97.2 0.00064 2.2E-08 52.0 6.3 62 68-129 325-404 (490)
220 4f3v_A ESX-1 secretion system 97.2 0.0011 3.8E-08 47.2 7.1 62 68-129 151-219 (282)
221 4dt4_A FKBP-type 16 kDa peptid 97.2 0.0002 6.8E-09 47.4 3.0 28 1-28 68-95 (169)
222 3qwp_A SET and MYND domain-con 97.2 0.0007 2.4E-08 50.8 6.3 62 68-129 303-382 (429)
223 2kr7_A FKBP-type peptidyl-prol 97.2 0.00025 8.7E-09 46.0 3.3 29 1-29 50-78 (151)
224 3gw4_A Uncharacterized protein 97.1 0.0011 3.8E-08 43.0 6.0 63 68-130 8-78 (203)
225 2k8i_A SLYD, peptidyl-prolyl C 97.1 0.00053 1.8E-08 45.4 4.2 28 1-28 45-72 (171)
226 3q15_A PSP28, response regulat 97.1 0.0033 1.1E-07 45.4 8.7 48 68-115 238-292 (378)
227 3prb_A FKBP-type peptidyl-prol 97.1 0.00017 5.7E-09 50.1 1.6 28 1-28 57-84 (231)
228 3qww_A SET and MYND domain-con 97.1 0.0011 3.8E-08 49.9 6.2 46 68-113 356-411 (433)
229 4f3v_A ESX-1 secretion system 97.0 0.0025 8.4E-08 45.4 7.4 54 68-122 187-245 (282)
230 2ooe_A Cleavage stimulation fa 97.0 0.0025 8.6E-08 48.2 7.9 59 70-128 304-366 (530)
231 2kfw_A FKBP-type peptidyl-prol 97.0 0.00036 1.2E-08 47.2 2.8 29 1-29 45-73 (196)
232 2ooe_A Cleavage stimulation fa 97.0 0.0034 1.2E-07 47.5 8.1 60 70-129 256-332 (530)
233 3n71_A Histone lysine methyltr 96.9 0.0021 7E-08 49.2 6.5 46 68-113 367-422 (490)
234 3e4b_A ALGK; tetratricopeptide 96.8 0.0039 1.3E-07 46.7 7.2 58 68-128 233-293 (452)
235 3qwp_A SET and MYND domain-con 96.8 0.0027 9.1E-08 47.7 6.2 46 68-113 345-400 (429)
236 1klx_A Cysteine rich protein B 96.8 0.006 2E-07 38.2 7.0 56 68-125 77-136 (138)
237 2xm6_A Protein corresponding t 96.8 0.0027 9.4E-08 47.5 6.1 59 68-128 347-409 (490)
238 2xm6_A Protein corresponding t 96.7 0.0075 2.6E-07 45.1 8.4 60 68-129 312-374 (490)
239 3u64_A Protein TP_0956; tetrat 96.7 0.01 3.5E-07 42.6 8.0 62 68-129 179-250 (301)
240 1hz4_A MALT regulatory protein 96.6 0.014 4.8E-07 41.7 8.8 62 68-129 109-185 (373)
241 1w26_A Trigger factor, TF; cha 96.5 0.0031 1.1E-07 47.5 4.7 44 2-51 199-242 (432)
242 3e4b_A ALGK; tetratricopeptide 96.3 0.014 5E-07 43.5 7.5 57 68-127 195-257 (452)
243 1hz4_A MALT regulatory protein 96.3 0.014 4.7E-07 41.7 7.0 62 68-129 69-146 (373)
244 4b4t_Q 26S proteasome regulato 96.1 0.02 6.7E-07 41.6 7.2 53 68-120 20-91 (434)
245 3mv2_B Coatomer subunit epsilo 96.0 0.012 3.9E-07 42.5 5.4 57 68-127 194-264 (310)
246 1pc2_A Mitochondria fission pr 96.0 0.013 4.3E-07 38.0 5.0 51 80-130 28-83 (152)
247 4b4t_Q 26S proteasome regulato 95.9 0.026 9E-07 40.9 6.9 46 83-128 134-185 (434)
248 1xi4_A Clathrin heavy chain; a 95.7 0.029 9.9E-07 48.2 7.2 44 81-129 1102-1145(1630)
249 2v5f_A Prolyl 4-hydroxylase su 95.4 0.05 1.7E-06 32.2 5.9 48 83-130 4-58 (104)
250 1b89_A Protein (clathrin heavy 95.3 0.099 3.4E-06 39.6 8.2 42 89-130 212-253 (449)
251 1xi4_A Clathrin heavy chain; a 95.0 0.069 2.3E-06 46.0 7.3 50 68-128 1211-1260(1630)
252 1b89_A Protein (clathrin heavy 94.8 0.028 9.7E-07 42.5 4.1 49 68-127 138-186 (449)
253 3mv2_B Coatomer subunit epsilo 94.8 0.055 1.9E-06 39.0 5.4 48 68-115 116-167 (310)
254 3ly7_A Transcriptional activat 94.5 0.13 4.6E-06 37.9 7.0 49 68-117 293-343 (372)
255 1t11_A Trigger factor, TF; hel 94.0 0.038 1.3E-06 41.1 3.1 45 1-51 201-245 (392)
256 3ly7_A Transcriptional activat 93.3 0.31 1E-05 36.0 7.0 48 81-129 274-321 (372)
257 4gns_B Protein CSD3, chitin bi 92.8 0.68 2.3E-05 37.3 8.8 45 86-130 339-383 (754)
258 3ffl_A Anaphase-promoting comp 91.2 0.57 1.9E-05 30.7 5.5 25 85-109 123-147 (167)
259 2ff4_A Probable regulatory pro 90.3 1.3 4.5E-05 32.5 7.5 51 79-129 166-216 (388)
260 4gns_B Protein CSD3, chitin bi 89.6 0.59 2E-05 37.7 5.4 42 68-109 353-396 (754)
261 3ffl_A Anaphase-promoting comp 87.9 1.5 5.2E-05 28.6 5.6 47 68-114 36-93 (167)
262 2crb_A Nuclear receptor bindin 87.4 1.4 5E-05 25.9 4.8 29 83-111 14-42 (97)
263 3u64_A Protein TP_0956; tetrat 85.2 0.85 2.9E-05 32.7 3.6 49 68-116 220-272 (301)
264 2br9_A 14-3-3E, 14-3-3 protein 81.6 8.5 0.00029 26.5 7.4 45 68-112 153-201 (234)
265 1zbp_A Hypothetical protein VP 81.2 8.4 0.00029 27.2 7.3 57 68-124 13-73 (273)
266 2uy1_A Cleavage stimulation fa 79.8 9.5 0.00032 28.7 7.8 52 68-125 202-253 (493)
267 3ubw_A 14-3-3E, 14-3-3 protein 79.3 11 0.00038 26.4 7.4 45 68-112 179-227 (261)
268 3uzd_A 14-3-3 protein gamma; s 79.1 11 0.00039 26.1 7.4 45 68-112 154-202 (248)
269 2w2u_A Hypothetical P60 katani 77.5 6 0.0002 22.6 4.8 27 86-112 21-47 (83)
270 1o9d_A 14-3-3-like protein C; 77.3 13 0.00044 26.0 7.3 45 68-112 158-206 (260)
271 4a5x_A MITD1, MIT domain-conta 75.6 7.8 0.00027 22.2 5.0 29 84-112 16-44 (86)
272 2npm_A 14-3-3 domain containin 75.5 13 0.00045 26.0 6.9 44 68-112 179-226 (260)
273 3iqu_A 14-3-3 protein sigma; s 75.2 12 0.00042 25.7 6.6 45 68-112 156-204 (236)
274 2v6y_A AAA family ATPase, P60 74.2 8.1 0.00028 21.9 4.8 28 85-112 12-39 (83)
275 3kae_A CDC27, possible protein 73.3 12 0.00042 25.0 5.9 42 68-112 49-90 (242)
276 4e6h_A MRNA 3'-END-processing 71.8 17 0.00057 28.9 7.5 55 68-127 332-387 (679)
277 1nzn_A CGI-135 protein, fissio 70.7 11 0.00036 23.4 5.0 51 80-130 31-86 (126)
278 2cfu_A SDSA1; SDS-hydrolase, l 69.5 15 0.00052 29.0 6.8 44 86-129 451-494 (658)
279 1wfd_A Hypothetical protein 15 69.3 12 0.0004 21.7 4.8 26 87-112 18-43 (93)
280 3t5x_A PCI domain-containing p 69.2 21 0.00071 23.7 6.6 41 81-121 11-51 (203)
281 2cpt_A SKD1 protein, vacuolar 68.3 12 0.00039 22.8 4.8 25 88-112 22-46 (117)
282 2v6x_A Vacuolar protein sortin 66.9 14 0.00049 20.8 4.8 26 87-112 16-41 (85)
283 3efz_A 14-3-3 protein; 14-3-3, 65.7 32 0.0011 24.1 7.2 46 68-113 175-226 (268)
284 2o8p_A 14-3-3 domain containin 64.0 28 0.00095 23.8 6.4 46 67-112 147-196 (227)
285 4e6h_A MRNA 3'-END-processing 63.7 37 0.0013 26.9 8.0 47 78-124 94-145 (679)
286 1ya0_A SMG-7 transcript varian 63.2 20 0.00068 27.4 6.2 32 96-127 164-195 (497)
287 4b4t_S RPN3, 26S proteasome re 63.1 7.6 0.00026 30.0 3.8 51 68-118 247-304 (523)
288 3gty_X Trigger factor, TF; cha 61.9 8.4 0.00029 28.8 3.8 36 1-51 192-227 (433)
289 3myv_A SUSD superfamily protei 60.6 22 0.00074 26.5 5.9 32 81-112 187-218 (454)
290 2ff4_A Probable regulatory pro 58.4 24 0.00082 25.7 5.8 57 68-124 187-253 (388)
291 3kez_A Putative sugar binding 57.8 25 0.00087 26.2 5.9 32 81-112 193-224 (461)
292 2rpa_A Katanin P60 ATPase-cont 57.7 16 0.00055 20.6 3.7 26 87-112 15-40 (78)
293 3mcx_A SUSD superfamily protei 55.1 30 0.001 25.9 5.9 33 81-113 199-231 (477)
294 3ebb_A Phospholipase A2-activa 54.9 36 0.0012 24.1 6.0 47 82-128 210-258 (304)
295 2dl1_A Spartin; SPG20, MIT, st 54.7 6.6 0.00022 24.0 1.8 44 64-115 15-60 (116)
296 3lew_A SUSD-like carbohydrate 54.3 31 0.0011 26.0 5.9 33 81-113 200-232 (495)
297 3eab_A Spastin; spastin, MIT, 50.7 8.1 0.00028 22.4 1.7 6 68-73 13-18 (89)
298 4gq4_A Menin; tumor suppressor 46.1 42 0.0014 25.4 5.2 44 68-111 287-330 (489)
299 3txn_A 26S proteasome regulato 45.7 66 0.0022 23.7 6.3 47 68-114 115-169 (394)
300 1ya0_A SMG-7 transcript varian 44.1 1E+02 0.0036 23.4 7.4 54 68-121 168-223 (497)
301 3snx_A SUSD homolog, putative 42.0 34 0.0012 25.5 4.4 33 81-113 188-220 (460)
302 3kae_A CDC27, possible protein 41.3 78 0.0027 21.2 6.2 48 68-115 78-145 (242)
303 3hdx_A SUSD homolog, SUSD supe 40.6 40 0.0014 25.2 4.6 32 82-113 195-226 (478)
304 3ax2_A Mitochondrial import re 40.0 48 0.0016 18.3 4.0 28 89-116 22-49 (73)
305 2ca5_A MXIH; transport protein 39.6 19 0.00065 20.6 2.0 25 99-123 25-49 (85)
306 4h7y_A Dual specificity protei 39.2 76 0.0026 20.4 6.0 47 68-119 83-129 (161)
307 4h7y_A Dual specificity protei 38.2 67 0.0023 20.7 4.7 60 64-124 38-100 (161)
308 3qnk_A Putative lipoprotein; a 35.4 54 0.0018 24.8 4.6 32 81-112 179-210 (517)
309 3bu8_A Telomeric repeat-bindin 35.2 1.1E+02 0.0036 21.0 6.5 28 92-119 122-149 (235)
310 3s6n_M SurviVal motor neuron p 33.3 34 0.0012 16.1 2.0 17 98-114 16-32 (37)
311 3l22_A SUSD superfamily protei 33.2 34 0.0012 25.3 3.2 30 82-111 199-228 (441)
312 4b4t_R RPN7, 26S proteasome re 32.2 52 0.0018 24.2 4.0 46 68-113 147-197 (429)
313 4g26_A Pentatricopeptide repea 31.8 1.6E+02 0.0056 22.0 8.0 30 83-112 104-133 (501)
314 2yhe_A SEC-alkyl sulfatase; hy 36.8 11 0.00036 30.0 0.0 44 86-129 463-506 (668)
315 3re2_A Predicted protein; meni 30.0 1.1E+02 0.0038 22.8 5.2 43 68-110 280-322 (472)
316 3kez_A Putative sugar binding 29.2 81 0.0028 23.4 4.6 30 83-112 337-366 (461)
317 3mkq_A Coatomer beta'-subunit; 29.1 86 0.0029 24.3 5.0 28 83-110 680-707 (814)
318 4gq2_M Nucleoporin NUP120; bet 29.0 2.4E+02 0.0083 23.2 7.9 60 68-127 856-945 (950)
319 1qsa_A Protein (soluble lytic 29.0 64 0.0022 25.3 4.2 39 91-129 292-330 (618)
320 3l32_A Phosphoprotein; antipar 28.7 10 0.00035 18.9 -0.2 10 4-13 16-25 (45)
321 2g0u_A Type III secretion syst 28.6 35 0.0012 19.9 2.0 24 99-122 31-54 (92)
322 1om2_A Protein (mitochondrial 28.1 66 0.0023 18.8 3.2 27 90-116 26-52 (95)
323 3jq1_A SUSD superfamily protei 27.9 54 0.0019 24.6 3.5 31 82-112 178-208 (481)
324 3i4g_A SUSD-like carbohydrate 27.7 87 0.003 23.8 4.6 31 82-112 196-226 (528)
325 3lvj_C Sulfurtransferase TUSA; 27.3 37 0.0013 18.9 2.0 19 3-21 29-47 (82)
326 3u84_A Menin; MLL, JUND, ledgf 27.1 1.3E+02 0.0044 22.9 5.2 43 68-110 302-344 (550)
327 3bqo_A Telomeric repeat-bindin 26.6 38 0.0013 22.8 2.1 52 68-119 94-152 (211)
328 4gq2_M Nucleoporin NUP120; bet 26.5 34 0.0012 28.2 2.3 24 88-111 844-867 (950)
329 1je3_A EC005, hypothetical 8.6 26.5 44 0.0015 19.4 2.2 18 3-20 46-63 (97)
330 2fb7_A SM-like protein, LSM-14 25.9 43 0.0015 19.6 2.0 29 12-40 42-71 (95)
331 1jdq_A TM006 protein, hypothet 24.9 42 0.0014 19.5 1.9 19 3-21 45-63 (98)
332 2p5d_A UPF0310 protein mjecl36 24.7 61 0.0021 20.3 2.8 21 5-27 35-55 (147)
333 3mkq_A Coatomer beta'-subunit; 24.5 1.1E+02 0.0036 23.8 4.7 18 93-110 745-762 (814)
334 3jq1_A SUSD superfamily protei 24.2 1.1E+02 0.0038 22.8 4.6 31 83-113 360-390 (481)
335 3hdx_A SUSD homolog, SUSD supe 23.3 1.2E+02 0.0041 22.6 4.6 31 83-113 363-393 (478)
336 3mcx_A SUSD superfamily protei 23.0 1E+02 0.0036 22.9 4.3 30 83-112 356-386 (477)
337 3myv_A SUSD superfamily protei 22.6 94 0.0032 23.0 3.9 30 83-112 334-365 (454)
338 3gae_A Protein DOA1; UFD3, CDC 22.3 1E+02 0.0035 21.1 3.8 47 82-128 159-212 (253)
339 3t5v_B Nuclear mRNA export pro 22.2 2.1E+02 0.0072 21.5 5.7 37 81-117 217-254 (455)
340 4abx_A DNA repair protein RECN 21.8 1E+02 0.0034 19.7 3.5 40 78-117 84-123 (175)
341 1zbp_A Hypothetical protein VP 21.3 1.6E+02 0.0056 20.6 4.6 29 93-121 6-34 (273)
342 3snx_A SUSD homolog, putative 20.9 1.2E+02 0.004 22.6 4.1 30 83-112 320-350 (460)
343 1wy6_A Hypothetical protein ST 20.6 1.6E+02 0.0056 18.8 4.1 31 82-112 123-153 (172)
No 1
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.91 E-value=1.6e-23 Score=153.10 Aligned_cols=130 Identities=24% Similarity=0.309 Sum_probs=111.6
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCC-CCCCCCCceEEEEEeeccccCCc---cCcCcchhhhHHHH---------
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEP-SKSIPPGAKLYYSLTLHSVLPDF---DLAELPVEKRLDFG--------- 67 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~-~~~ip~~~~~~~~v~l~~~~~~~---~~~~~~~~e~~~~~--------- 67 (131)
+|.+|.+|++||++.|+|+|.++||..|.+ .+.||+++++.|.++|.++.... ..|.+...++...+
T Consensus 109 ~e~~l~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~a~~~~~~g~~ 188 (338)
T 2if4_A 109 LAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNS 188 (338)
T ss_dssp HHHHHHHCCBTCEEEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHHHHHHHHHHHH
Confidence 367999999999999999999999999963 26799999999999999987654 36777776665543
Q ss_pred ------HHHHHHHHHH--HhhhhhH-----------------HHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHH
Q psy18096 68 ------GILASQELLD--SLIKERI-----------------NCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQ 122 (131)
Q Consensus 68 ------y~~Ai~~~~~--~~~~~~~-----------------~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~ 122 (131)
|.+|+..|.+ .+.+... .+|+|+|.||+++++|++|+.+|+++|+++|++.++||
T Consensus 189 ~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~ 268 (338)
T 2if4_A 189 LFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALF 268 (338)
T ss_dssp TCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 8889988888 4444443 48999999999999999999999999999999999999
Q ss_pred HHHHhhhc
Q psy18096 123 RKAKCLIL 130 (131)
Q Consensus 123 rrg~a~~~ 130 (131)
++|.+|..
T Consensus 269 ~lg~a~~~ 276 (338)
T 2if4_A 269 RRGKAKAE 276 (338)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99999874
No 2
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.89 E-value=7.4e-23 Score=154.89 Aligned_cols=130 Identities=28% Similarity=0.460 Sum_probs=115.9
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccCCccCcCcchhhhHH-------HH------
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLPDFDLAELPVEKRLD-------FG------ 67 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~~~~~~~~~~~e~~~-------~~------ 67 (131)
+|.|+..|+.||++.|.++|.|+||..|.+...|||++.+.|.+++.++.+....|.+....+.. .|
T Consensus 202 ~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~ 281 (457)
T 1kt0_A 202 IDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKG 281 (457)
T ss_dssp HHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999998666899999999999999999999888877655433 22
Q ss_pred --HHHHHHHHHH--Hhhhhh---------------HHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 --GILASQELLD--SLIKER---------------INCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 --y~~Ai~~~~~--~~~~~~---------------~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
|.+|+..|++ ++.|.. ..+|+|+|.||+++++|++|+.+|++||+++|++.++||++|.+|
T Consensus 282 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~ 361 (457)
T 1kt0_A 282 GKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQ 361 (457)
T ss_dssp TCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 8999999988 545554 799999999999999999999999999999999999999999998
Q ss_pred hc
Q psy18096 129 IL 130 (131)
Q Consensus 129 ~~ 130 (131)
..
T Consensus 362 ~~ 363 (457)
T 1kt0_A 362 LL 363 (457)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 3
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.89 E-value=1.6e-22 Score=147.55 Aligned_cols=130 Identities=28% Similarity=0.405 Sum_probs=114.2
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccCCccCcCcchhhhHH-------HH------
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLPDFDLAELPVEKRLD-------FG------ 67 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~~~~~~~~~~~e~~~-------~~------ 67 (131)
+|.||..|++||++.|.++|.++||..|.+...||+++.+.|+++|.++.+....+......... .|
T Consensus 81 ~e~al~~~~~Ge~~~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~ 160 (336)
T 1p5q_A 81 LERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKE 160 (336)
T ss_dssp HHHHHTTCCTTCEEEEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEEECCccccCcCCCCccCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHC
Confidence 36899999999999999999999999997655799999999999999999988877776544332 22
Q ss_pred --HHHHHHHHHH--Hhhhhh---------------HHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 --GILASQELLD--SLIKER---------------INCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 --y~~Ai~~~~~--~~~~~~---------------~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
|.+|+..|++ ++.|.. ..+++|+|.||+++|+|++|+.+|+++|+++|++.++|+++|.++
T Consensus 161 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 240 (336)
T 1p5q_A 161 GKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAH 240 (336)
T ss_dssp TCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 8999999988 555555 799999999999999999999999999999999999999999998
Q ss_pred hc
Q psy18096 129 IL 130 (131)
Q Consensus 129 ~~ 130 (131)
..
T Consensus 241 ~~ 242 (336)
T 1p5q_A 241 LA 242 (336)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 4
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.63 E-value=3.3e-16 Score=118.44 Aligned_cols=129 Identities=17% Similarity=0.224 Sum_probs=99.7
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccCCcc---------------CcC--cc----
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLPDFD---------------LAE--LP---- 59 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~~~~---------------~~~--~~---- 59 (131)
+|.+|.+|++||++.|+|+|.++||..|.| +.|||++++.|+|+|.++..... .+. ..
T Consensus 90 ~~~~l~~m~~Ge~~~~~i~~~~~yg~~g~~-~~i~~~~~l~~~v~l~~~~~~~~~~dg~~~k~i~~~g~~~~~p~~g~~V 168 (457)
T 1kt0_A 90 WDIGVATMKRGEICHLLCKPEYAYGSAGSL-PKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATV 168 (457)
T ss_dssp HHHHHTTCCTTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEEECEETTSSSSEEEEEEECCBCSCCCCTTCEE
T ss_pred HHHHHhhCCCCCEEEEEEChHHhccccCCC-CCCCCCCcEEEEEeeceeecccccCCcceEEEEEecCCCCCCCCCCCEE
Confidence 478999999999999999999999999975 68999999999999998754200 000 00
Q ss_pred ----------------------h---hhhHHHHHHHHHHHHH--------------------------------------
Q psy18096 60 ----------------------V---EKRLDFGGILASQELL-------------------------------------- 76 (131)
Q Consensus 60 ----------------------~---~e~~~~~y~~Ai~~~~-------------------------------------- 76 (131)
+ ...+-.++..|+..++
T Consensus 169 ~v~y~g~~~g~~f~~~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~ 248 (457)
T 1kt0_A 169 EIHLEGRCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLK 248 (457)
T ss_dssp EEEEEEEETTEEEEEEEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEE
T ss_pred EEEEEEEeCCeEEecCceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhh
Confidence 0 0001112444444332
Q ss_pred ----------H--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC---------------HHHHHHHHHhhh
Q psy18096 77 ----------D--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN---------------IKALQRKAKCLI 129 (131)
Q Consensus 77 ----------~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~---------------~ka~~rrg~a~~ 129 (131)
. +..+..+..+.|+|.++.++|+|++|+..+++||+++|++ ..+|+++|.++.
T Consensus 249 ~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~ 328 (457)
T 1kt0_A 249 SFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYL 328 (457)
T ss_dssp EEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 3456778899999999999999999999999999999999 799999999986
Q ss_pred c
Q psy18096 130 L 130 (131)
Q Consensus 130 ~ 130 (131)
.
T Consensus 329 ~ 329 (457)
T 1kt0_A 329 K 329 (457)
T ss_dssp H
T ss_pred H
Confidence 4
No 5
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.49 E-value=2e-13 Score=88.92 Aligned_cols=63 Identities=30% Similarity=0.316 Sum_probs=57.8
Q ss_pred HHHHHHHHHH--Hh------------------hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHh
Q psy18096 68 GILASQELLD--SL------------------IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKC 127 (131)
Q Consensus 68 y~~Ai~~~~~--~~------------------~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a 127 (131)
|.+|+..|++ ++ .|....+|+|+|.||+++|+|++|+.+|+++|+++|+++++||++|.+
T Consensus 27 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 106 (162)
T 3rkv_A 27 YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKA 106 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHH
Confidence 7888888877 44 788889999999999999999999999999999999999999999999
Q ss_pred hhc
Q psy18096 128 LIL 130 (131)
Q Consensus 128 ~~~ 130 (131)
+..
T Consensus 107 ~~~ 109 (162)
T 3rkv_A 107 RIA 109 (162)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
No 6
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.48 E-value=2.7e-13 Score=85.69 Aligned_cols=63 Identities=29% Similarity=0.283 Sum_probs=60.5
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ +++|..+.+|.|+|.||.++|+|++|+.+|+++|++||++.++|+++|.++..
T Consensus 29 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~ 93 (126)
T 4gco_A 29 YPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA 93 (126)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence 9999999999 88999999999999999999999999999999999999999999999999864
No 7
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.45 E-value=5e-13 Score=88.22 Aligned_cols=63 Identities=22% Similarity=0.145 Sum_probs=57.2
Q ss_pred HHHHHHHHHH--Hhhhh------------hHHHHHHHHHHHHHhCChHHHHHHHHHHHhh-------CCCCHHHH----H
Q psy18096 68 GILASQELLD--SLIKE------------RINCYNNLAQAQIKLGSLEPALMSLENVLNL-------DPNNIKAL----Q 122 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~------------~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~-------dp~~~ka~----~ 122 (131)
|.+|+..|++ +++|. ...+|+|+|.|+.++|+|++|+.+|++||++ +|++.++| |
T Consensus 27 ~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~ 106 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVY 106 (159)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHH
Confidence 9999999998 66665 3449999999999999999999999999999 99999999 9
Q ss_pred HHHHhhhc
Q psy18096 123 RKAKCLIL 130 (131)
Q Consensus 123 rrg~a~~~ 130 (131)
|||.|+..
T Consensus 107 ~rG~aL~~ 114 (159)
T 2hr2_A 107 SRALALDG 114 (159)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 99999864
No 8
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.38 E-value=2.6e-13 Score=91.42 Aligned_cols=67 Identities=21% Similarity=0.409 Sum_probs=49.0
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCC-CCCCCCCceEEEEEeeccccCCcc---CcCcchhhhHHHH
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEP-SKSIPPGAKLYYSLTLHSVLPDFD---LAELPVEKRLDFG 67 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~-~~~ip~~~~~~~~v~l~~~~~~~~---~~~~~~~e~~~~~ 67 (131)
+|.+|..|++||++.|+|+|.++||..|.+ .+.|||++++.|+|+|+++....+ .|.|+.++|++.+
T Consensus 109 ~eeaL~gMk~Ge~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~~A 179 (180)
T 2f4e_A 109 LAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAA 179 (180)
T ss_dssp HHHHHTTCCBTCEEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCCC---------------
T ss_pred HHHHHhCCCCCCEEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHhhc
Confidence 467999999999999999999999999963 257999999999999999988887 8999999998754
No 9
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.36 E-value=4.6e-12 Score=84.94 Aligned_cols=91 Identities=20% Similarity=0.123 Sum_probs=69.4
Q ss_pred EEEEEeeccccCCccCcCcchhhhHHHH---------------HHHHHHHHHH--Hhhhhh----------------HHH
Q psy18096 40 LYYSLTLHSVLPDFDLAELPVEKRLDFG---------------GILASQELLD--SLIKER----------------INC 86 (131)
Q Consensus 40 ~~~~v~l~~~~~~~~~~~~~~~e~~~~~---------------y~~Ai~~~~~--~~~~~~----------------~~~ 86 (131)
......+.++++.++.|.++..++...+ |.+|+..|.+ ++.|.. ..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (198)
T 2fbn_A 11 SSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISC 90 (198)
T ss_dssp -----------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHH
Confidence 3445667889999999999887765543 8999999988 443433 389
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 87 YNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 87 ~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
+.|+|.|+.++|+|++|+.+|+++++++|++.++++++|.++..
T Consensus 91 ~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 134 (198)
T 2fbn_A 91 NLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMY 134 (198)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998863
No 10
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.34 E-value=9.7e-12 Score=77.48 Aligned_cols=63 Identities=29% Similarity=0.265 Sum_probs=60.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ ++.|....++.|+|.|+.++|+|++|+.+++++++++|++.++|+++|.++..
T Consensus 20 ~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 84 (126)
T 3upv_A 20 WPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA 84 (126)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 9999999999 78899999999999999999999999999999999999999999999999864
No 11
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.33 E-value=6.9e-12 Score=81.93 Aligned_cols=63 Identities=11% Similarity=-0.043 Sum_probs=60.9
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ .++|.++.+|.|+|.|+.++|+|++|+..++++++++|+++.+|+++|.++..
T Consensus 52 ~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~ 116 (151)
T 3gyz_A 52 IEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLR 116 (151)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHH
Confidence 9999999999 88999999999999999999999999999999999999999999999999864
No 12
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.30 E-value=5.3e-12 Score=79.68 Aligned_cols=62 Identities=18% Similarity=0.133 Sum_probs=57.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCH-------HHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNI-------KALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~-------ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|..+.+|+|+|.||.++|+|++|+.+|+++|+++|++. ++|+++|.++.
T Consensus 24 ~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~ 94 (127)
T 4gcn_A 24 FEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQ 94 (127)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHH
Confidence 9999999999 88999999999999999999999999999999999998774 67888887765
No 13
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.23 E-value=6.6e-11 Score=71.49 Aligned_cols=62 Identities=21% Similarity=0.044 Sum_probs=59.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC------HHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN------IKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~------~ka~~rrg~a~~ 129 (131)
|.+|+..|++ ++.|....++.|+|.|+.++|+|++|+.+++++++++|++ .++++++|.++.
T Consensus 20 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~ 89 (111)
T 2l6j_A 20 YREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQG 89 (111)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence 9999999999 7889999999999999999999999999999999999999 999999999875
No 14
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.22 E-value=4.6e-12 Score=79.72 Aligned_cols=50 Identities=36% Similarity=0.694 Sum_probs=45.9
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeecccc
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVL 50 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~ 50 (131)
+|.+|..|++||++.|+|+|.+|||+.|.+...|||++++.|+++|++++
T Consensus 70 ~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 70 WDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp HHHHHTTCCTTCEEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEEC
T ss_pred HHHHHhCCCCCCEEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEeC
Confidence 47899999999999999999999999998656899999999999999863
No 15
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.22 E-value=2.8e-11 Score=76.36 Aligned_cols=61 Identities=23% Similarity=0.225 Sum_probs=58.3
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
|.+|+..|++ +++|....+|.|+|.|+..+|+|++|+.+++++|++||+|..++...+.++
T Consensus 63 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 63 FQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 9999999999 889999999999999999999999999999999999999999999888775
No 16
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.20 E-value=1.7e-10 Score=75.08 Aligned_cols=63 Identities=22% Similarity=0.035 Sum_probs=58.9
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+.+|++ ++.|....++.|+|.||.++|+|++|+.+++++++++|++..+|+++|.++..
T Consensus 27 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 91 (164)
T 3sz7_A 27 YSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFD 91 (164)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 9999999999 78888999999999999999999999999999999999999999999998864
No 17
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.19 E-value=1.1e-10 Score=75.47 Aligned_cols=62 Identities=13% Similarity=0.059 Sum_probs=59.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|..+.+|.|+|.+|.++|++++|+..+.++++++|+++.+|++.|.++.
T Consensus 47 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 110 (150)
T 4ga2_A 47 YDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLC 110 (150)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 9999999999 8899999999999999999999999999999999999999999999998875
No 18
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=2.4e-11 Score=78.14 Aligned_cols=60 Identities=32% Similarity=0.548 Sum_probs=52.5
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccCCccCcCcch
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLPDFDLAELPV 60 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~~~~~~~~~~ 60 (131)
+|.+|..|++||++.|+++|.++||+.|...+.|||++++.|+++|.++.+..+.+.++.
T Consensus 73 ~e~~L~gm~~Ge~~~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~~~e~~s~ 132 (135)
T 2d9f_A 73 LDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRPDLEMSGP 132 (135)
T ss_dssp TTTTGGGSCTTCEEEEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSCSSSSCCC
T ss_pred HHHHHhCCCCCCEEEEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCCchhhcCc
Confidence 578999999999999999999999999933468999999999999999988776665543
No 19
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.14 E-value=3.3e-10 Score=72.19 Aligned_cols=63 Identities=21% Similarity=0.108 Sum_probs=60.1
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|.+ .++|....++.++|.|+.++|+|++|+..+++++.++|+++.+++.+|.++..
T Consensus 34 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 98 (142)
T 2xcb_A 34 WDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ 98 (142)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 9999999998 78899999999999999999999999999999999999999999999998864
No 20
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.14 E-value=2.5e-11 Score=78.88 Aligned_cols=49 Identities=27% Similarity=0.563 Sum_probs=45.8
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeecccc
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVL 50 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~ 50 (131)
+|.+|..|++||++.|+|+|.+|||+.|.+ +.|||++++.|+|+|.++.
T Consensus 94 ~e~~l~gm~~Ge~~~v~ipp~~aYG~~g~~-~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 94 WDIGVATMKKGEICHLLCKPEYAYGSAGSL-PKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp HHHHHTTCCBTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEEE
T ss_pred HHHHHhCCCCCCEEEEEEChHHCcCCCCCC-CCcCCCCeEEEEEEEEEec
Confidence 478999999999999999999999999975 7999999999999999885
No 21
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.14 E-value=2.1e-10 Score=74.09 Aligned_cols=63 Identities=16% Similarity=0.096 Sum_probs=60.1
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ .++|....++.|+|.|+..+|+|++|+..+++++.++|+++.+++.+|.++..
T Consensus 37 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~ 101 (148)
T 2vgx_A 37 YEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ 101 (148)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 9999999999 78899999999999999999999999999999999999999999999999864
No 22
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.14 E-value=3e-11 Score=76.63 Aligned_cols=50 Identities=30% Similarity=0.529 Sum_probs=46.0
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccCC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLPD 52 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~~ 52 (131)
+|.+|..|++||++.|+|+|.+|||+.|. +.|||++++.|+++|.++.+.
T Consensus 75 ~e~~l~gm~~Ge~~~~~ip~~~aYG~~g~--~~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 75 WDQGLKGMCVGEKRKLIIPPALGYGKEGK--GKIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp HHHHSTTCCTTCEEEEEECGGGTTTTTCB--TTBCTTCCEEEEEEEEEEECC
T ss_pred HHHHHhCCCCCCEEEEEEChHHhcCCCCC--CCCCCCCeEEEEEEEEEEEcC
Confidence 47899999999999999999999999995 489999999999999998764
No 23
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.14 E-value=4.8e-10 Score=82.76 Aligned_cols=63 Identities=25% Similarity=0.324 Sum_probs=58.0
Q ss_pred HHHHHHHHHH--H----------------hhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--S----------------LIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~----------------~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ + +.+....+|+|+|.||+++++|++|+.+|++||+++|++.++|+++|.++.
T Consensus 239 ~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~ 318 (370)
T 1ihg_A 239 WEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQ 318 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH
Confidence 7888888877 3 678889999999999999999999999999999999999999999999986
Q ss_pred c
Q psy18096 130 L 130 (131)
Q Consensus 130 ~ 130 (131)
.
T Consensus 319 ~ 319 (370)
T 1ihg_A 319 G 319 (370)
T ss_dssp H
T ss_pred H
Confidence 4
No 24
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.11 E-value=8e-10 Score=69.11 Aligned_cols=63 Identities=22% Similarity=0.120 Sum_probs=60.0
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|.+ .+.|....++.|+|.|+..+|+|++|+..+.++++++|++..+|+..|.++..
T Consensus 25 ~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 89 (137)
T 3q49_B 25 YPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE 89 (137)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH
Confidence 9999999998 77889999999999999999999999999999999999999999999998864
No 25
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.11 E-value=9.6e-11 Score=77.89 Aligned_cols=59 Identities=25% Similarity=0.343 Sum_probs=50.3
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccCCccCcCcchhh
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLPDFDLAELPVEK 62 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~~~~~~~~~~~e 62 (131)
++.+|..|++||++.|+|+|.+|||+.|.+ +.|||++++.|+|+|.++.+.. +.++..+
T Consensus 94 ~eeaL~gMk~Ge~~~~~Ip~~laYG~~g~~-~~Ipp~s~LiF~VeL~~i~~~~--~~~~~~e 152 (167)
T 1jvw_A 94 WTEALQLMREGDRWRLFIPYDLAYGVTGGG-GMIPPYSPLEFDVELISIKDGG--KGRTAEE 152 (167)
T ss_dssp HHHHHTTCCTTCEEEEEECGGGTTTTTCSS-SSSCTTCCEEEEEEEEEEGGGC--CSCBHHH
T ss_pred HHHHHcCCCCCCEEEEEECchhhCCCCCCC-CCcCCCCeEEEEEEEEEEEcCC--CCCCHHH
Confidence 367999999999999999999999999963 6899999999999999998643 4454444
No 26
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.10 E-value=6.1e-11 Score=72.59 Aligned_cols=51 Identities=33% Similarity=0.568 Sum_probs=46.4
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccCC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLPD 52 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~~ 52 (131)
+|.+|..|++||++.|+++|.++||+.|.+ +.|||++++.|+++|.++.+.
T Consensus 49 ~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~-~~Ip~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 49 WDQGLLGMCEGEKRKLVIPSELGYGERGAP-PKIPGGATLVFEVELLKIERR 99 (102)
T ss_dssp HHTTSTTCCTTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEEGGG
T ss_pred HHHHHhCCCCCCEEEEEECHHHCcCCCCCC-CCcCcCCeEEEEEEEEEeccc
Confidence 478999999999999999999999999964 589999999999999998754
No 27
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.10 E-value=5.4e-11 Score=75.80 Aligned_cols=49 Identities=27% Similarity=0.563 Sum_probs=45.6
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeecccc
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVL 50 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~ 50 (131)
+|.+|..|++||++.|+|+|.+|||+.|.+ +.|||++++.|+++|.++.
T Consensus 78 ~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~-~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 78 WDIGVATMKKGEICHLLCKPEYAYGSAGSL-PKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp HHHHHTTCCTTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEEE
T ss_pred HHHHHhcCCCCCEEEEEEChHHcCCCCCCC-CCcCCCCEEEEEEEEEEec
Confidence 478999999999999999999999999975 7899999999999999875
No 28
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.09 E-value=4.3e-11 Score=76.85 Aligned_cols=49 Identities=29% Similarity=0.547 Sum_probs=44.9
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeecccc
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVL 50 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~ 50 (131)
+|.+|..|++||++.|+|+|.+|||+.|.+ +.|||++++.|+|+|+++.
T Consensus 85 ~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~-~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 85 MELGLLSMRRGELARFLFKPNYAYGTLGCP-PLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp HHHHHHTCEETCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEEC
T ss_pred HHHHHhCCCCCCEEEEEECHHHCcCCCCCC-CCcCcCCeEEEEEEEEEEe
Confidence 468999999999999999999999999974 5699999999999999874
No 29
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.08 E-value=7.8e-11 Score=72.68 Aligned_cols=48 Identities=27% Similarity=0.595 Sum_probs=44.2
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccc
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSV 49 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~ 49 (131)
+|.+|..|++||++.|+++|.++||+.|.+ +.|||++++.|+++|.++
T Consensus 59 ~~~~l~gm~~Ge~~~~~ip~~~ayG~~~~~-~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 59 WEEGVAQMSVGQRAKLTISPDYAYGATGHP-GIIPPHATLVFDVELLKL 106 (107)
T ss_dssp HHHHHTTCCTTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEE
T ss_pred HHHHHhCCCCCCEEEEEECHHHccCCCCCC-CCcCCCCeEEEEEEEEEe
Confidence 468999999999999999999999999974 579999999999999876
No 30
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.08 E-value=8.2e-11 Score=75.01 Aligned_cols=50 Identities=32% Similarity=0.605 Sum_probs=45.8
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLP 51 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~ 51 (131)
+|.+|..|++||++.|+|+|.++||+.|.+ +.|||++++.|+|+|.++.+
T Consensus 78 ~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~-~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 78 WDICVSSMRKNEKCLVRIESMYGYGDEGCG-ESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp HHHHHTTCCTTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEEEC
T ss_pred HHHHHhCCCCCCEEEEEEChHHcCCCCCCC-CCcCCCCeEEEEEEEEEEec
Confidence 468999999999999999999999999974 57999999999999999865
No 31
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.08 E-value=8.8e-11 Score=77.34 Aligned_cols=53 Identities=32% Similarity=0.589 Sum_probs=46.7
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccCCc
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLPDF 53 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~~~ 53 (131)
+|.+|..|++||+++|+|+|.++||+.|...+.|||++++.|+|+|.++.+..
T Consensus 99 ~eeaL~gMk~Ge~~~v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 99 LDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp HHHHTTTSCTTCEEEEEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEECS
T ss_pred HHHHHcCCCCCCEEEEEECchhcCCcccccCCCcCCCCeEEEEEEEEEEEccc
Confidence 46899999999999999999999999993246899999999999999986543
No 32
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.08 E-value=8.5e-11 Score=73.84 Aligned_cols=49 Identities=33% Similarity=0.691 Sum_probs=44.9
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeecccc
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVL 50 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~ 50 (131)
+|.+|..|++||++.|+++|.++||..|.+ +.|||++++.|+++|.++.
T Consensus 69 ~e~~l~gm~~Ge~~~~~ip~~~ayG~~~~~-~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 69 LDLSVPLMDVGETAMVTADSKYCYGPQGRS-PYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp HHHHGGGSCTTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEEE
T ss_pred HHHHHhCCCCCCEEEEEEChHHccCCCCCC-CccCCCCeEEEEEEEEEec
Confidence 468999999999999999999999999974 6899999999999998874
No 33
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.07 E-value=8.5e-10 Score=68.89 Aligned_cols=62 Identities=19% Similarity=0.125 Sum_probs=59.6
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|.+ +++|....++.++|.++..+|++++|+..++++++++|++..+++..|.++.
T Consensus 33 ~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 33 LAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 9999999999 7889999999999999999999999999999999999999999999999875
No 34
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.07 E-value=5.9e-11 Score=84.90 Aligned_cols=57 Identities=28% Similarity=0.481 Sum_probs=50.1
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccCCccCcC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLPDFDLAE 57 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~~~~~~~ 57 (131)
+|.+|..|++||++.|+++|.|+||..|.+...||+++++.|+|+|+++.+.++.|+
T Consensus 224 ~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~~~~~W~ 280 (280)
T 1q1c_A 224 LERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWE 280 (280)
T ss_dssp HHHHHTTCCTTCEEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEECCCC---
T ss_pred HHHHHhCCCCCcEEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeCCCCCCC
Confidence 478999999999999999999999999976557999999999999999999888874
No 35
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.06 E-value=3.8e-10 Score=74.31 Aligned_cols=62 Identities=13% Similarity=0.104 Sum_probs=58.9
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCCh----------HHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSL----------EPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~----------~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|++|+..+.. +++|..+.+|.|++.+++.++++ ++|+..+++||++||++..|||..|.||.
T Consensus 18 feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 18 FEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 9999999999 88999999999999999999876 59999999999999999999999999986
No 36
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.06 E-value=1.2e-10 Score=72.57 Aligned_cols=48 Identities=31% Similarity=0.668 Sum_probs=44.1
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccc
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSV 49 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~ 49 (131)
+|.+|..|++||++.|+++|.++||+.|.+ +.|||++++.|+++|.++
T Consensus 65 ~e~~l~gm~~Ge~~~v~ip~~~ayG~~~~~-~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 65 WDVGIPKLSVGEKARLTIPGPYAYGPRGFP-GLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp HHHHGGGCCTTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEE
T ss_pred HHHHHhCCCCCCEEEEEECHHHCcCCCCCC-CCcCCCCeEEEEEEEEEe
Confidence 468999999999999999999999999964 579999999999999876
No 37
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.05 E-value=3.9e-10 Score=69.61 Aligned_cols=62 Identities=23% Similarity=0.122 Sum_probs=35.4
Q ss_pred HHHHHHHHHH--Hh---hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SL---IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~---~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ ++ +|....++.|+|.+|.++|+|++|+..++++++++|++..+++..|.++.
T Consensus 6 ~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 72 (117)
T 3k9i_A 6 EAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLY 72 (117)
T ss_dssp -CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 3445555555 33 45555666666666666666666666666666666666666666665553
No 38
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.05 E-value=7.2e-10 Score=71.58 Aligned_cols=63 Identities=10% Similarity=-0.104 Sum_probs=59.1
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
+.+||..+.. ...|.....+.++|.+|.++|+|++|+..++++|+++|+++.+|+.+|.++..
T Consensus 13 ~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~ 77 (150)
T 4ga2_A 13 VERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYEL 77 (150)
T ss_dssp HHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 7899999988 77888999999999999999999999999999999999999999999999864
No 39
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.04 E-value=1e-09 Score=74.31 Aligned_cols=62 Identities=19% Similarity=0.171 Sum_probs=59.6
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|..+.++.|+|.++..+|++++|+..++++++++|++..+|+.+|.++.
T Consensus 70 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~ 133 (208)
T 3urz_A 70 YDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYY 133 (208)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 9999999999 8899999999999999999999999999999999999999999999998874
No 40
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.04 E-value=1.7e-10 Score=73.71 Aligned_cols=48 Identities=33% Similarity=0.600 Sum_probs=43.8
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccc
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSV 49 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~ 49 (131)
+|.+|..|++||++.|+|+|.++||+.|.+ +.|||++++.|+++|.++
T Consensus 83 ~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~-~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 83 WDQGVATMTLGEKALFTIPYQLAYGERGYP-PVIPPKATLVFEVELLAV 130 (130)
T ss_dssp HHHHHHHSCTTEEEEEEECTTTSTTTTCCS-TTSCSSCCEEEEEEEEEC
T ss_pred HHHHHhCCCCCCEEEEEECcHHHCCCCCCC-CCcCCCCeEEEEEEEEEC
Confidence 468999999999999999999999999974 579999999999999864
No 41
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.04 E-value=1.4e-10 Score=74.45 Aligned_cols=48 Identities=31% Similarity=0.546 Sum_probs=43.9
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccc
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSV 49 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~ 49 (131)
+|.+|..|++||+++|+|+|.++||+.|.+ +.|||++++.|+++|.++
T Consensus 86 ~eeaL~gmk~Ge~~~v~ip~~~aYG~~~~~-~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 86 WDEGVQGMKVGGVRRLTIPPQLGYGARGAG-GVIPPNATLVFEVELLDV 133 (133)
T ss_dssp HHHHSTTCBTTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEC
T ss_pred HHHHHcCCCCCCEEEEEECcHHhCCCCCCC-CCCCCCCeEEEEEEEEEC
Confidence 478999999999999999999999999964 679999999999999864
No 42
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.03 E-value=2e-09 Score=62.65 Aligned_cols=63 Identities=25% Similarity=0.225 Sum_probs=59.1
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|.+ ++.|....++.++|.++.++|++++|+..+.++++++|++..+++..|.++..
T Consensus 25 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 89 (91)
T 1na3_A 25 YDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 89 (91)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 8999999998 77788899999999999999999999999999999999999999999998753
No 43
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.03 E-value=1.5e-10 Score=79.88 Aligned_cols=49 Identities=27% Similarity=0.381 Sum_probs=44.9
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeecccc
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVL 50 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~ 50 (131)
++.+|..|++||+++|+|+|.+|||+.|.+ +.|||++++.|+|+|.++.
T Consensus 170 ~eeaL~gMk~Gek~~v~IPp~lAYG~~g~~-~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 170 WTSALQNMPTGAKWRLVIPSDQAYGAEGAG-DLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp HHHHHTTCCTTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEEE
T ss_pred HHHHHhCCCCCCEEEEEECchhcCCCCCCC-CCCCCCCeEEEEEEEEEEe
Confidence 367999999999999999999999999964 5799999999999999875
No 44
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.02 E-value=1.8e-10 Score=74.03 Aligned_cols=51 Identities=33% Similarity=0.638 Sum_probs=46.4
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccCC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLPD 52 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~~ 52 (131)
+|.+|..|++||++.|+|+|.+|||+.|.+ +.||+++++.|+++|.++...
T Consensus 73 ~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~-~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 73 WDLGVATMTKGEVAEFTIRSDYGYGDAGSP-PKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp HHHHHTTCCBTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEEEC-
T ss_pred HHHHHhcCCCCCEEEEEEChHHcCCCCCCC-CCcCcCCcEEEEEEEEEeecC
Confidence 478999999999999999999999999974 789999999999999999753
No 45
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.02 E-value=1.7e-09 Score=76.66 Aligned_cols=63 Identities=22% Similarity=0.120 Sum_probs=60.1
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ .+.|....++.|+|.||.++|+|++|+.+++++++++|++.++++++|.++..
T Consensus 20 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 84 (281)
T 2c2l_A 20 YPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE 84 (281)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 9999999999 77899999999999999999999999999999999999999999999999864
No 46
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.01 E-value=3.1e-09 Score=71.87 Aligned_cols=63 Identities=24% Similarity=0.225 Sum_probs=59.6
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHH----------------HHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNN----------------LAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N----------------~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|.+..++.+ +|.+|.++|++++|+..++++|+++|+++.+|+.+|.++.
T Consensus 20 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 99 (208)
T 3urz_A 20 NGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQV 99 (208)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 9999999999 788999999999 9999999999999999999999999999999999999886
Q ss_pred c
Q psy18096 130 L 130 (131)
Q Consensus 130 ~ 130 (131)
.
T Consensus 100 ~ 100 (208)
T 3urz_A 100 C 100 (208)
T ss_dssp H
T ss_pred H
Confidence 3
No 47
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=98.96 E-value=3.6e-10 Score=83.27 Aligned_cols=51 Identities=27% Similarity=0.602 Sum_probs=46.6
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCC----CCCCCceEEEEEeeccccC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSK----SIPPGAKLYYSLTLHSVLP 51 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~----~ip~~~~~~~~v~l~~~~~ 51 (131)
||.+|.+|++||++.|+|+|+|+||+.|.+.. .|||++.+.|+++|.++..
T Consensus 182 l~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~ 236 (356)
T 3jxv_A 182 LAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKT 236 (356)
T ss_dssp HHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEEC
T ss_pred HHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEec
Confidence 47899999999999999999999999998653 5999999999999999865
No 48
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=98.96 E-value=5.6e-10 Score=76.87 Aligned_cols=50 Identities=26% Similarity=0.414 Sum_probs=45.7
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLP 51 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~ 51 (131)
++.+|..|++||+++|+|+|.++||+.|.+ +.|||++++.|+|+|.++.+
T Consensus 162 ~eeaL~gMk~Gek~~v~IP~~laYG~~g~~-~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 162 WTEALQLMPAGSTWEIYVPSGLAYGPRSVG-GPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp HHHHHTTCCTTCEEEEEECGGGTTTTCCCS-SSCCTTCCEEEEEEEEEEEC
T ss_pred HHHHHcCCCCCCEEEEEECchhccCccCCC-CCCCCCCeEEEEEEEEEEEc
Confidence 367899999999999999999999999963 68999999999999999865
No 49
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=98.94 E-value=4.8e-10 Score=77.05 Aligned_cols=48 Identities=31% Similarity=0.559 Sum_probs=43.9
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccc
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSV 49 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~ 49 (131)
+|.+|..|++||++.|+|+|.+|||+.|.+ +.|||++++.|+++|.++
T Consensus 162 ~eeaL~gM~~Ge~~~v~Ipp~~aYG~~g~~-~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 162 WDEGVQGMKVGGVRRLTIPPQLGYGARGAA-GVIPPNATLVFEVELLDV 209 (209)
T ss_dssp HHHHHTTCBTTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEC
T ss_pred HHHHHhCCCCCCEEEEEECcHHhCCCCCCC-CCcCCCCeEEEEEEEEEC
Confidence 478999999999999999999999999964 669999999999999864
No 50
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.93 E-value=6.6e-09 Score=61.70 Aligned_cols=56 Identities=23% Similarity=0.225 Sum_probs=52.4
Q ss_pred HHHHHHHHHH--HhhhhhHH-HHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHH
Q psy18096 68 GILASQELLD--SLIKERIN-CYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQR 123 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~-~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~r 123 (131)
|.+|+..|++ +..|.... ++.++|.+|.++|+|++|+..++++++++|++..++++
T Consensus 16 ~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 74 (99)
T 2kc7_A 16 IENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR 74 (99)
T ss_dssp HHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH
T ss_pred HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 9999999998 77888888 99999999999999999999999999999999999844
No 51
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=1.4e-08 Score=63.68 Aligned_cols=62 Identities=21% Similarity=0.142 Sum_probs=55.7
Q ss_pred HHHHHHHHHH--Hhhhhh---HHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKER---INCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~---~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.+|++ ++.|.. ..++.|+|.++.++++|++|+..++++++++|++..+++.+|.++.
T Consensus 44 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 110 (148)
T 2dba_A 44 YGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALE 110 (148)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHH
Confidence 9999999998 555554 8899999999999999999999999999999999999999998875
No 52
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.91 E-value=9.3e-09 Score=61.39 Aligned_cols=63 Identities=19% Similarity=0.094 Sum_probs=58.9
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCC--CHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPN--NIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~--~~ka~~rrg~a~~~ 130 (131)
|.+|+..+++ ++.|....++.++|.++..+|+|++|+..++++++++|+ +..+++..|.++..
T Consensus 22 ~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~ 88 (112)
T 2kck_A 22 YTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRY 88 (112)
T ss_dssp HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH
Confidence 8899999998 677888899999999999999999999999999999999 99999999998864
No 53
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.91 E-value=3.2e-09 Score=78.75 Aligned_cols=62 Identities=11% Similarity=0.080 Sum_probs=45.3
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCC-hHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGS-LEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~-~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|.+..+|+|++.++.++|+ +++|+.+++++|+++|++..+|+.+|.++.
T Consensus 113 ~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~ 177 (382)
T 2h6f_A 113 SERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVE 177 (382)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 7777777777 6667777777777777777775 777777777777777777777777777664
No 54
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.90 E-value=1.1e-08 Score=61.51 Aligned_cols=62 Identities=26% Similarity=0.127 Sum_probs=34.9
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ ...|....++.++|.++.++|+|++|+..++++++++|++..+++..|.++.
T Consensus 20 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 20 IDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 5555555555 4445555555555555555555555555555555555555555555555543
No 55
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.89 E-value=3.8e-09 Score=68.55 Aligned_cols=62 Identities=10% Similarity=0.036 Sum_probs=58.7
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|....+|.|+|.+|.++|+|++|+.++.++++++|++..+|++++.+.+
T Consensus 61 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~ 124 (164)
T 3sz7_A 61 HEKAAEDAELATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETT 124 (164)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 9999999999 8889999999999999999999999999999999999999999999987754
No 56
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.87 E-value=1.2e-08 Score=66.90 Aligned_cols=63 Identities=19% Similarity=0.195 Sum_probs=49.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|..|+..+.+ .+.|....++.++|.+|.++|+|++|+..++++++++|++..+|+.+|.++..
T Consensus 89 ~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~ 153 (184)
T 3vtx_A 89 KQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG 153 (184)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH
Confidence 6666666666 66677778888888888888888888888888888888888888888887753
No 57
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=98.86 E-value=1.5e-09 Score=75.20 Aligned_cols=47 Identities=28% Similarity=0.547 Sum_probs=43.2
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccc
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSV 49 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~ 49 (131)
++.+|..|++||++.|+|+|.++||+.|.+ .|||++++.|+|+|.++
T Consensus 177 ~eeaL~gMk~Gek~~v~IP~~laYG~~g~~--~IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 177 WTEGLKNIKKGGKIKLVIPPELAYGKAGVP--GIPPNSTLVFDVELLDV 223 (224)
T ss_dssp HHHHGGGSCTTCEEEEEECGGGTTTTTCBT--TBCTTCCEEEEEEEEEE
T ss_pred HHHHHcCCCCCCEEEEEECchhhcCcCCCC--CCCCCCEEEEEEEEEEe
Confidence 367999999999999999999999999964 39999999999999876
No 58
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.86 E-value=7e-09 Score=76.94 Aligned_cols=62 Identities=13% Similarity=0.041 Sum_probs=59.5
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|.+..+|+|++.++.++|+|++|+.+|+++|++||+|..+|+.+|.++.
T Consensus 148 ~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~ 211 (382)
T 2h6f_A 148 LHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQ 211 (382)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHH
Confidence 8899999988 8899999999999999999999999999999999999999999999999885
No 59
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.86 E-value=1.8e-08 Score=68.24 Aligned_cols=63 Identities=11% Similarity=-0.019 Sum_probs=55.1
Q ss_pred HHHHHHHHHH--Hhhh-hhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIK-ERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~-~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ ++.| ....++.|+|.|+.++|+|++|+..++++++++|++..+|+.+|.++..
T Consensus 23 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 88 (228)
T 4i17_A 23 YAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRD 88 (228)
T ss_dssp HHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH
Confidence 8899999988 6666 6778888899999999999999999999999999999999999988754
No 60
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.85 E-value=1.2e-08 Score=69.47 Aligned_cols=62 Identities=18% Similarity=0.140 Sum_probs=59.7
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|..+.++.|+|.++.++|++++|+..++++++++|++..+++.+|.++.
T Consensus 21 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~ 84 (217)
T 2pl2_A 21 YDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYV 84 (217)
T ss_dssp HHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 9999999999 8889999999999999999999999999999999999999999999999875
No 61
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.84 E-value=2.1e-08 Score=61.72 Aligned_cols=62 Identities=21% Similarity=0.237 Sum_probs=35.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.++++ ++.|....++.++|.++.++|++++|+..++++++++|++..+++..+.++.
T Consensus 66 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 129 (133)
T 2lni_A 66 FQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMM 129 (133)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 5555555555 4445555555556666666666666666666666555555555555555543
No 62
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.83 E-value=1.4e-08 Score=80.95 Aligned_cols=62 Identities=13% Similarity=0.127 Sum_probs=41.8
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|....+|+|+|.++.++|++++|+..+++||+++|++..+|+.+|.++.
T Consensus 59 ~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~ 122 (723)
T 4gyw_A 59 LQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHK 122 (723)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 6666666666 5666666666666666666666666666666666666666666666666654
No 63
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.83 E-value=9.3e-09 Score=61.86 Aligned_cols=48 Identities=10% Similarity=0.105 Sum_probs=28.1
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCC
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDP 115 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp 115 (131)
|.+|+..|++ +++|....+|.++|.||.++|++++|+..++++++++|
T Consensus 23 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 23 ASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp HHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 5555555555 55555555566666666666666666666666665554
No 64
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.83 E-value=1.8e-08 Score=61.57 Aligned_cols=59 Identities=19% Similarity=0.183 Sum_probs=36.9
Q ss_pred HHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 71 ASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 71 Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|+..|.+ +..|....++.++|.++..+|+|++|+..+.+++.++|++..+|+..|.++.
T Consensus 4 a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 64 (115)
T 2kat_A 4 ITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQ 64 (115)
T ss_dssp HHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH
Confidence 4445554 4455566666666666666666666666666666666666666666666553
No 65
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.82 E-value=2.5e-08 Score=63.71 Aligned_cols=62 Identities=21% Similarity=0.125 Sum_probs=47.0
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|.+ .+.|....++.++|.++..+|+|++|+..+.+++.++|++..+|+..|.++.
T Consensus 29 ~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 29 YENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 7777777777 5566677777777777777777777777777777777777777777777664
No 66
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.81 E-value=2.2e-08 Score=61.77 Aligned_cols=62 Identities=16% Similarity=0.105 Sum_probs=44.3
Q ss_pred HHHHHHHHHH--HhhhhhH---HHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC---HHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERI---NCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN---IKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~---~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~---~ka~~rrg~a~~ 129 (131)
|.+|+..|+. ...|... .++.++|.++.++|+|++|+..+++++..+|++ ..+++..|.++.
T Consensus 18 ~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~ 87 (129)
T 2xev_A 18 YDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQY 87 (129)
T ss_dssp HHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH
Confidence 7777777776 3344444 677777777777777777777777777777777 777777777764
No 67
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.80 E-value=3.8e-08 Score=60.04 Aligned_cols=61 Identities=18% Similarity=0.091 Sum_probs=30.1
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
|.+|+.++.+ ++.|....++.++|.++.++|++++|+..+.++++++|++..+++..|.++
T Consensus 62 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 124 (131)
T 2vyi_A 62 YAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAE 124 (131)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHH
Confidence 4444444444 334444445555555555555555555555555555555555555544443
No 68
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.80 E-value=2.2e-08 Score=72.69 Aligned_cols=62 Identities=23% Similarity=0.197 Sum_probs=59.4
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|.+..+++|+|.+|..+|+|++|+.+++++++++|++..+++.+|.++.
T Consensus 212 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~ 275 (336)
T 1p5q_A 212 FSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQ 275 (336)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 9999999999 8889999999999999999999999999999999999999999999998875
No 69
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.79 E-value=2.1e-08 Score=76.18 Aligned_cols=62 Identities=21% Similarity=0.125 Sum_probs=44.6
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ ++.|....++.|+|.+|.++|+|++|+.+++++++++|++..+|+++|.++.
T Consensus 22 ~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 85 (477)
T 1wao_1 22 YENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 85 (477)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 6667776666 5566677777777777777777777777777777777777777777777664
No 70
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.79 E-value=2.3e-08 Score=71.16 Aligned_cols=62 Identities=16% Similarity=0.032 Sum_probs=58.0
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.+|++ +..|..+.+++|+|.++.++|+|++|+..++++|+++|+++.+|+++|.++.
T Consensus 182 ~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~ 245 (291)
T 3mkr_A 182 LQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQ 245 (291)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 8889988888 6678899999999999999999999999999999999999999999998765
No 71
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.79 E-value=1e-08 Score=81.73 Aligned_cols=62 Identities=24% Similarity=0.209 Sum_probs=38.6
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|....+|+|+|.+|.++|++++|+..+++||+++|++..+|+.+|.++.
T Consensus 93 ~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~ 156 (723)
T 4gyw_A 93 VQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQ 156 (723)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHH
Confidence 5666666655 5556666666666666666666666666666666666666666666665553
No 72
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.77 E-value=1.5e-08 Score=68.83 Aligned_cols=62 Identities=19% Similarity=0.165 Sum_probs=51.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHh-----------CChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKL-----------GSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl-----------~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|....++.|+|.++.++ |++++|+..++++++++|++..+|+.+|.++.
T Consensus 55 ~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~ 129 (217)
T 2pl2_A 55 VNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYA 129 (217)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 7888888877 77788888888888888888 88888888888888888888888888887765
No 73
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=98.77 E-value=4.3e-09 Score=75.26 Aligned_cols=50 Identities=32% Similarity=0.677 Sum_probs=46.2
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLP 51 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~ 51 (131)
+|.+|..|++||++.|+|+|.+|||+.|.+ +.||+++++.|+++|.++..
T Consensus 110 ~e~aL~gm~~Ge~~~v~ipp~~aYG~~g~~-~~Ip~~~~lvf~Vel~~i~~ 159 (280)
T 1q1c_A 110 WDIAIATMKVGEVCHITCKPEYAYGSAGSP-PKIPPNATLVFEVELFEFKG 159 (280)
T ss_dssp HHHHHTTCCTTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEEEC
T ss_pred HHHHHhcCCCCCEEEEEECcHHhCCCcCcc-CCCCCCCcEEEEEEeeeecc
Confidence 478999999999999999999999999974 68999999999999999865
No 74
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.75 E-value=4e-08 Score=60.39 Aligned_cols=63 Identities=27% Similarity=0.250 Sum_probs=59.3
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ +..|....++.++|.++..+|++++|+..++++++++|++..+++..|.++..
T Consensus 32 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 96 (133)
T 2lni_A 32 YPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEA 96 (133)
T ss_dssp SHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 9999999999 67788899999999999999999999999999999999999999999998763
No 75
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=98.75 E-value=1.4e-09 Score=69.27 Aligned_cols=45 Identities=31% Similarity=0.589 Sum_probs=39.6
Q ss_pred hcccCCCcEEEEEEcCCCCCCCCCCC----CCCCCCCceEEEEEeeccc
Q psy18096 5 LPLMETGEECQIEITARFGYGDKGEP----SKSIPPGAKLYYSLTLHSV 49 (131)
Q Consensus 5 l~~M~~gE~~~v~i~~~~ayG~~G~~----~~~ip~~~~~~~~v~l~~~ 49 (131)
|+.|++||++.|+|+|.++||+.|.+ .+.|||++++.|+++|.++
T Consensus 80 ~~~m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 80 IPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp BCCCBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred ccccCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 45599999999999999999999853 2579999999999999875
No 76
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.75 E-value=4.4e-08 Score=63.29 Aligned_cols=53 Identities=17% Similarity=0.041 Sum_probs=50.5
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHH
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKA 120 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka 120 (131)
|.+|+..+++ +++|..+.+|.++|.||..+|+|++|+.++.++++++|+|..+
T Consensus 79 ~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 133 (162)
T 3rkv_A 79 LHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASV 133 (162)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHH
Confidence 9999999999 8899999999999999999999999999999999999999844
No 77
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.74 E-value=3.5e-08 Score=61.86 Aligned_cols=50 Identities=24% Similarity=0.325 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 81 KERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 81 ~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
+..+.++.|+|.++.+.|+|++|+..+++||+++|+++.+|+.+|.++..
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~ 54 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE 54 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH
Confidence 45678899999999999999999999999999999999999999999864
No 78
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.73 E-value=3.3e-08 Score=65.03 Aligned_cols=57 Identities=11% Similarity=0.056 Sum_probs=50.7
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhC-----------ChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLG-----------SLEPALMSLENVLNLDPNNIKALQRKAK 126 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~-----------~~~~a~~~~~~al~~dp~~~ka~~rrg~ 126 (131)
+++||..|++ +++|....+|+|++.+|.++| +|++|+.+|++||++||+|. .|+++.
T Consensus 62 ~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~--~y~~al 131 (158)
T 1zu2_A 62 IQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT--HYLKSL 131 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH--HHHHHH
T ss_pred HHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH--HHHHHH
Confidence 5699999999 899999999999999999985 89999999999999999986 445543
No 79
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.73 E-value=3.3e-08 Score=60.42 Aligned_cols=63 Identities=16% Similarity=0.082 Sum_probs=58.3
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC-------HHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN-------IKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~-------~ka~~rrg~a~~~ 130 (131)
|.+|+.+|.+ ...|....++.++|.++..+|+|++|+..+.+++.++|++ ..++++.|.++..
T Consensus 20 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 91 (131)
T 1elr_A 20 FDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFK 91 (131)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH
Confidence 8999999998 6778889999999999999999999999999999999888 9999999998763
No 80
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.71 E-value=7.9e-08 Score=65.07 Aligned_cols=62 Identities=11% Similarity=-0.015 Sum_probs=58.0
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCH-------HHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNI-------KALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~-------ka~~rrg~a~~ 129 (131)
|.+|+..|++ ++.|....++.++|.+|.++|++++|+..++++++++|++. .+|+.+|.++.
T Consensus 58 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~ 128 (228)
T 4i17_A 58 YKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQ 128 (228)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHH
Confidence 9999999999 88899999999999999999999999999999999999999 66888888765
No 81
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.70 E-value=1.1e-07 Score=57.85 Aligned_cols=63 Identities=25% Similarity=0.151 Sum_probs=59.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..+.+ ...|....++.++|.++..+|++++|+..+.+++.++|++..+++..|.++..
T Consensus 28 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (131)
T 2vyi_A 28 FEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSS 92 (131)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHH
Confidence 9999999998 67788899999999999999999999999999999999999999999998753
No 82
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.70 E-value=1.4e-07 Score=57.32 Aligned_cols=68 Identities=21% Similarity=0.298 Sum_probs=55.8
Q ss_pred cchhhhHHHH--------HHHHHHHHHH--H-------hhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHH
Q psy18096 58 LPVEKRLDFG--------GILASQELLD--S-------LIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKA 120 (131)
Q Consensus 58 ~~~~e~~~~~--------y~~Ai~~~~~--~-------~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka 120 (131)
++..+..+.| |.+|+..|.. . .......++.++|.|+.++|++++|+...++++.++|++..+
T Consensus 3 Lsa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 3 LTAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CCHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 4556666665 7888888777 1 123578899999999999999999999999999999999998
Q ss_pred HHHHH
Q psy18096 121 LQRKA 125 (131)
Q Consensus 121 ~~rrg 125 (131)
+.+++
T Consensus 83 ~~n~~ 87 (104)
T 2v5f_A 83 NGNLK 87 (104)
T ss_dssp HHHHH
T ss_pred HhhHH
Confidence 77765
No 83
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.70 E-value=6.2e-08 Score=59.87 Aligned_cols=62 Identities=19% Similarity=0.022 Sum_probs=57.6
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhC------CCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLD------PNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~d------p~~~ka~~rrg~a~~ 129 (131)
|.+|+..+++ +++|....++.++|.++..+|++++|+.++.++++++ |++..++...+.+..
T Consensus 54 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~ 123 (126)
T 3upv_A 54 FPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQ 123 (126)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHH
Confidence 9999999999 8889999999999999999999999999999999999 999988888777653
No 84
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.69 E-value=3.9e-08 Score=73.79 Aligned_cols=63 Identities=24% Similarity=0.199 Sum_probs=58.5
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ +++|..+.++.++|.||.++|+|++|+..++++++++|++..+++++|.++..
T Consensus 41 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 105 (537)
T 3fp2_A 41 FNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANES 105 (537)
T ss_dssp CC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 8889999988 77899999999999999999999999999999999999999999999998753
No 85
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.69 E-value=2e-08 Score=66.07 Aligned_cols=50 Identities=14% Similarity=-0.011 Sum_probs=45.2
Q ss_pred HHHHHHHHHH--Hh-------hhhhHHHH----HHHHHHHHHhCChHHHHHHHHHHHhhCCCC
Q psy18096 68 GILASQELLD--SL-------IKERINCY----NNLAQAQIKLGSLEPALMSLENVLNLDPNN 117 (131)
Q Consensus 68 y~~Ai~~~~~--~~-------~~~~~~~~----~N~a~~~~kl~~~~~a~~~~~~al~~dp~~ 117 (131)
|.+|+..|++ ++ +|....+| +|+|.++..+|++++|+.++++||+++|++
T Consensus 73 ~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 73 FDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 7777777776 55 99999999 999999999999999999999999999976
No 86
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.68 E-value=5.2e-08 Score=63.35 Aligned_cols=53 Identities=13% Similarity=0.075 Sum_probs=50.6
Q ss_pred HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 78 SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 78 ~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
+++|....++.++|.++.++|+|++|+..+++++.++|++..+|+.+|.++..
T Consensus 30 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~ 82 (151)
T 3gyz_A 30 AIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQI 82 (151)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999864
No 87
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.68 E-value=1.2e-07 Score=62.09 Aligned_cols=62 Identities=15% Similarity=0.079 Sum_probs=53.4
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|.++.++.++|.+|.++|++++|+..+.+++..+|++..+++..|..+.
T Consensus 21 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 21 FDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 8888888888 7788888888889999888888888888888888888888888888877654
No 88
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.68 E-value=8.7e-08 Score=63.94 Aligned_cols=62 Identities=15% Similarity=-0.013 Sum_probs=48.7
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCH----------------HHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNI----------------KALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~----------------ka~~rrg~a~~ 129 (131)
|.+|+..|++ ++.|....++.|+|.+|.++|+|++|+..++++++++|++. .+++.+|.++.
T Consensus 53 ~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 132 (213)
T 1hh8_A 53 MTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYA 132 (213)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHH
Confidence 7778877777 66677778888888888888888888888888888777666 78888887765
No 89
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=98.68 E-value=7.7e-09 Score=76.18 Aligned_cols=51 Identities=24% Similarity=0.505 Sum_probs=45.5
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCC-CCCCCCCCceEEEEEeeccccC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGE-PSKSIPPGAKLYYSLTLHSVLP 51 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~-~~~~ip~~~~~~~~v~l~~~~~ 51 (131)
+|.+|..|++||++.|+|+|.+|||+.|. ....|||++++.|+++|++|.+
T Consensus 304 ~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 304 LDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp HHHHHTTCCBTCEEEEEECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEEC
T ss_pred HHHHHhCCCCCCEEEEEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEEc
Confidence 47899999999999999999999999884 2357999999999999999864
No 90
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.68 E-value=7e-08 Score=64.40 Aligned_cols=62 Identities=11% Similarity=-0.066 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++-+.+ ...++.|+|.+|.++|+|++|+..++++++++|++..+|+.+|.++..
T Consensus 22 ~~~A~~~~~~a~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~ 83 (213)
T 1hh8_A 22 WKGALDAFSAVQDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ 83 (213)
T ss_dssp HHHHHHHHHTSSSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 89999999875433 678999999999999999999999999999999999999999998864
No 91
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.68 E-value=1.1e-07 Score=63.30 Aligned_cols=62 Identities=23% Similarity=0.253 Sum_probs=58.4
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.++++ ++.|....++.++|.+|..+|+|++|+..+.++++++|++..++...+.++.
T Consensus 104 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 167 (198)
T 2fbn_A 104 YPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVN 167 (198)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH
Confidence 9999999999 7889999999999999999999999999999999999999999998888764
No 92
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.68 E-value=1.6e-07 Score=56.22 Aligned_cols=61 Identities=20% Similarity=0.045 Sum_probs=57.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
|.+|+..+.+ ++.|....++.++|.++.++|++++|+..+.++++++|++..+++..+.+.
T Consensus 54 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 54 YQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 8999999988 777888999999999999999999999999999999999999999988765
No 93
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.67 E-value=1.1e-07 Score=64.52 Aligned_cols=63 Identities=29% Similarity=0.265 Sum_probs=55.9
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ ++.|....++.++|.++.++|++++|+..++++++++|++..+|+..|.++..
T Consensus 155 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 219 (258)
T 3uq3_A 155 WPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA 219 (258)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 8888888888 67788888999999999999999999999999999999999999999988753
No 94
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=98.65 E-value=5e-09 Score=69.34 Aligned_cols=54 Identities=11% Similarity=0.002 Sum_probs=40.6
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCC-------CCCCCC-----------------------------CCCCceEEEEE
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDK-------GEPSKS-----------------------------IPPGAKLYYSL 44 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~-------G~~~~~-----------------------------ip~~~~~~~~v 44 (131)
+|.+|.+|++||+++|+|+|++|||.. ..+... |++++++.|+|
T Consensus 72 wd~gl~~M~~Ge~~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeI 151 (165)
T 2lkn_A 72 WETIVCTMREGEIAQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHM 151 (165)
T ss_dssp HHHHHTTCCTTCEEEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEE
T ss_pred HHHHHhcCccCceEEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEE
Confidence 378999999999999999999999921 001111 23447799999
Q ss_pred eeccccCCcc
Q psy18096 45 TLHSVLPDFD 54 (131)
Q Consensus 45 ~l~~~~~~~~ 54 (131)
+|.++.+..+
T Consensus 152 ELl~Ve~P~e 161 (165)
T 2lkn_A 152 EMLKVESPGT 161 (165)
T ss_dssp EEEEEECTTT
T ss_pred EEEEEcCCcc
Confidence 9999987544
No 95
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.64 E-value=1.4e-07 Score=61.49 Aligned_cols=57 Identities=23% Similarity=0.146 Sum_probs=50.3
Q ss_pred HHHHHHHHHH--Hhh-h-hhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHH
Q psy18096 68 GILASQELLD--SLI-K-ERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRK 124 (131)
Q Consensus 68 y~~Ai~~~~~--~~~-~-~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rr 124 (131)
.+++|.+++. +.+ | ....+++|+|.+|.++++|++|++.|+++|+++|+|..|..-+
T Consensus 51 ~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk 111 (152)
T 1pc2_A 51 IRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 111 (152)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 7899999998 444 5 5789999999999999999999999999999999998876543
No 96
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.63 E-value=1.4e-07 Score=74.39 Aligned_cols=62 Identities=19% Similarity=0.097 Sum_probs=56.0
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|....+++|+|.++.++|+|++|+.++++|++++|++..+|+.+|.++.
T Consensus 449 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~ 512 (681)
T 2pzi_A 449 VAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAE 512 (681)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 8899999888 7788889999999999999999999999999999999999999999988875
No 97
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.63 E-value=2e-07 Score=63.41 Aligned_cols=62 Identities=15% Similarity=0.068 Sum_probs=54.6
Q ss_pred HHHHHHHHHH--Hhhhh---hHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHH---HHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKE---RINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIK---ALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~---~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~k---a~~rrg~a~~ 129 (131)
|.+|+..|++ +..|. ...++.++|.+|.++|+|++|+..++++++.+|++.. |+|++|.++.
T Consensus 20 ~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~ 89 (225)
T 2yhc_A 20 WRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNM 89 (225)
T ss_dssp HHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHH
Confidence 9999999998 43333 4579999999999999999999999999999999975 8999998874
No 98
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.61 E-value=3.3e-07 Score=55.28 Aligned_cols=62 Identities=26% Similarity=0.239 Sum_probs=47.5
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.++.+ +..|....++.++|.++.++|++++|+..++++++++|++..+++..|.++.
T Consensus 59 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 59 YDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 122 (125)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 7777777776 5556667777788888888888888888888888888888888877777654
No 99
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.61 E-value=3.3e-07 Score=55.25 Aligned_cols=63 Identities=24% Similarity=0.226 Sum_probs=58.0
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..+.+ ...|....++.++|.++.++|++++|+..+++++.++|++..+++..|.++..
T Consensus 25 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 89 (125)
T 1na0_A 25 YDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK 89 (125)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 8999999988 66777889999999999999999999999999999999999999999988753
No 100
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.61 E-value=1.5e-07 Score=70.02 Aligned_cols=62 Identities=23% Similarity=0.157 Sum_probs=57.7
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ ...| ...++.++|.|+.++|+|++|+..++++++++|++..+|+.+|.++..
T Consensus 22 ~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 85 (514)
T 2gw1_A 22 YDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEG 85 (514)
T ss_dssp HHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence 9999999999 5566 688999999999999999999999999999999999999999999864
No 101
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.58 E-value=2.9e-07 Score=70.66 Aligned_cols=62 Identities=10% Similarity=0.027 Sum_probs=41.4
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ ++.|....++.|+|.+|..+|++++|+..++++++++|++..+++..|.++.
T Consensus 39 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 102 (568)
T 2vsy_A 39 TTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALE 102 (568)
T ss_dssp HHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 6667766666 5556666666666666666666666666666666666666666666666654
No 102
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.58 E-value=2.1e-07 Score=63.93 Aligned_cols=63 Identities=21% Similarity=0.305 Sum_probs=55.8
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|.+ ++.|....++.++|.++..+|+|++|+..++++++++|++..+++..|.++..
T Consensus 59 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~ 123 (275)
T 1xnf_A 59 RALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY 123 (275)
T ss_dssp HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHH
Confidence 8888888888 67788888999999999999999999999999999999999999999888753
No 103
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.58 E-value=2.7e-07 Score=60.12 Aligned_cols=63 Identities=21% Similarity=0.150 Sum_probs=58.3
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHH-HHHhCCh--HHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQA-QIKLGSL--EPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~-~~kl~~~--~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+.+|.+ .+.|....++.++|.+ +...|++ ++|+..++++++++|++..+++..|.++..
T Consensus 60 ~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 127 (177)
T 2e2e_A 60 YSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFM 127 (177)
T ss_dssp HHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 9999999998 7788889999999999 8899999 999999999999999999999999998763
No 104
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.58 E-value=8.8e-08 Score=60.75 Aligned_cols=59 Identities=15% Similarity=0.000 Sum_probs=52.5
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAK 126 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~ 126 (131)
|.+|+..|++ .++|..+.++.|+|.|+..+|++++|+..++++++++|+++....-+.+
T Consensus 68 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 128 (142)
T 2xcb_A 68 YEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAAR 128 (142)
T ss_dssp HHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHH
Confidence 9999999999 8889999999999999999999999999999999999988655444433
No 105
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.58 E-value=7.7e-08 Score=70.78 Aligned_cols=63 Identities=17% Similarity=0.127 Sum_probs=58.9
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+.+|++ +..|....++.++|.++.++|++++|+..++++++++|++..+++..|.++..
T Consensus 42 ~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 106 (450)
T 2y4t_A 42 LADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLK 106 (450)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 9999999998 67788999999999999999999999999999999999999999999998763
No 106
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.57 E-value=5.7e-07 Score=64.62 Aligned_cols=63 Identities=21% Similarity=0.152 Sum_probs=59.8
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+.+|++ +..|....++.++|.+|.++|++++|+..++++++++|++..+|+..|.++..
T Consensus 81 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (365)
T 4eqf_A 81 LPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTN 145 (365)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHc
Confidence 9999999999 77899999999999999999999999999999999999999999999998753
No 107
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.57 E-value=1.3e-07 Score=60.74 Aligned_cols=53 Identities=17% Similarity=-0.039 Sum_probs=49.8
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHH
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKA 120 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka 120 (131)
|.+|+..|++ .++|..+.++.|+|.||..+|++++|+..++++++++|+++..
T Consensus 71 ~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 71 YDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEF 125 (148)
T ss_dssp HHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcc
Confidence 9999999999 8889999999999999999999999999999999999987654
No 108
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.57 E-value=2.7e-07 Score=56.57 Aligned_cols=55 Identities=13% Similarity=0.023 Sum_probs=51.4
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHH
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQ 122 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~ 122 (131)
|.+|+..+++ ++.|....++.|+|.|+.++|++++|+..+.+++..+|++.....
T Consensus 43 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 43 YRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 9999999999 888999999999999999999999999999999999999876643
No 109
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.56 E-value=4.3e-07 Score=56.77 Aligned_cols=61 Identities=21% Similarity=0.177 Sum_probs=56.3
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
|.+|+..+++ ++.|....++.++|.++..+|++++|+..+.++++++|++..++...+.+.
T Consensus 81 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 81 YDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 8999999988 777888999999999999999999999999999999999999988877664
No 110
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.55 E-value=2.6e-07 Score=68.04 Aligned_cols=62 Identities=16% Similarity=0.085 Sum_probs=58.0
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.++++ +++|....++.++|.+|.++|+|++|+.++++|++++|++..++...+.++.
T Consensus 289 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~ 352 (370)
T 1ihg_A 289 WQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQ 352 (370)
T ss_dssp HHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 8999999999 7889999999999999999999999999999999999999999988887764
No 111
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.55 E-value=5.1e-07 Score=62.39 Aligned_cols=63 Identities=14% Similarity=0.012 Sum_probs=56.1
Q ss_pred HHHHHHHHHH--Hhhhhh---HHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC---HHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKER---INCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN---IKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~---~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~---~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ +..|.. ..++.++|.||.++|+|++|+..++++++++|++ ..++|+.|.++..
T Consensus 31 ~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~ 101 (261)
T 3qky_A 31 YDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYK 101 (261)
T ss_dssp HHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHH
Confidence 9999999999 555555 8999999999999999999999999999998854 7899999999853
No 112
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.54 E-value=3.6e-07 Score=69.13 Aligned_cols=62 Identities=19% Similarity=0.078 Sum_probs=58.4
Q ss_pred HHHHHHHHHH--Hhhh---hhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIK---ERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~---~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++| ....++.|+|.+|.++|+|++|+..++++++++|++..+++.++.++.
T Consensus 237 ~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~ 303 (474)
T 4abn_A 237 SQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLE 303 (474)
T ss_dssp HHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 8889999988 7788 899999999999999999999999999999999999999999998875
No 113
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.54 E-value=5.8e-07 Score=63.55 Aligned_cols=62 Identities=18% Similarity=0.135 Sum_probs=55.6
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +..|....++.++|.++..+|+|++|+..++++++++|++..+++..|.++.
T Consensus 19 ~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 82 (359)
T 3ieg_A 19 LADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLL 82 (359)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHH
Confidence 8899999888 7778888899999999999999999999999999999999999999988875
No 114
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.53 E-value=5.9e-07 Score=57.19 Aligned_cols=60 Identities=25% Similarity=0.334 Sum_probs=54.5
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKC 127 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a 127 (131)
|.+|+..+.+ .+.|....++.++|.++.++|++++|+..+.++++++|++..++...+.+
T Consensus 63 ~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 63 YGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 124 (166)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 8999999998 77888999999999999999999999999999999999999988555444
No 115
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.53 E-value=4.2e-07 Score=65.32 Aligned_cols=62 Identities=16% Similarity=0.112 Sum_probs=55.9
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.+|++ ++.|....++.|+|.++.++|++++|+..++++++++|++..+|+..|.++.
T Consensus 229 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 292 (365)
T 4eqf_A 229 FNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCI 292 (365)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 8889988888 7778888899999999999999999999999999999999999999998875
No 116
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.50 E-value=3.5e-07 Score=54.64 Aligned_cols=48 Identities=19% Similarity=0.261 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 83 RINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 83 ~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
.+..+.++|.++.++|+|++|+..++++++++|++..+|+.+|.++..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 50 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIK 50 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999998864
No 117
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.49 E-value=1e-07 Score=57.20 Aligned_cols=51 Identities=22% Similarity=0.171 Sum_probs=46.9
Q ss_pred hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 80 IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 80 ~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
+|..+.++.++|.+|.++|+|++|+..++++++++|++..+|+.+|.++..
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~ 53 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYER 53 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 577889999999999999999999999999999999999999999999864
No 118
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.49 E-value=6.1e-07 Score=64.18 Aligned_cols=63 Identities=19% Similarity=0.101 Sum_probs=59.8
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+.+|++ +..|....++.++|.++.++|++++|+..+.++++++|++..+++..|.++..
T Consensus 80 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 144 (368)
T 1fch_A 80 LPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTN 144 (368)
T ss_dssp HHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 9999999999 77899999999999999999999999999999999999999999999998753
No 119
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.48 E-value=3.1e-07 Score=63.13 Aligned_cols=61 Identities=15% Similarity=0.174 Sum_probs=46.1
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHH-Hhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKA-KCL 128 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg-~a~ 128 (131)
|.+|+..|++ ++.|....++.++|.+|..+|+|++|+..++++++++|++..+|+.+| .++
T Consensus 90 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 153 (272)
T 3u4t_A 90 DSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYY 153 (272)
T ss_dssp HHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 7777777777 666777777777777777777777777777777777777777777777 544
No 120
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.47 E-value=9.9e-07 Score=60.49 Aligned_cols=63 Identities=13% Similarity=0.028 Sum_probs=57.3
Q ss_pred HHHHHHHHHH--Hh----hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SL----IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~----~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ +. .+....++.++|.++..+|+|++|+..++++++++|++..+|+..|.++..
T Consensus 21 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~ 89 (275)
T 1xnf_A 21 QEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQ 89 (275)
T ss_dssp HHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 8899999988 32 467899999999999999999999999999999999999999999998753
No 121
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.46 E-value=8.1e-07 Score=63.52 Aligned_cols=62 Identities=18% Similarity=0.111 Sum_probs=47.9
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ ++.|....++.++|.++.++|++++|+..++++++++|++..+++..|.++.
T Consensus 233 ~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 296 (368)
T 1fch_A 233 YDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCI 296 (368)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 7777777777 5667777778888888888888888888888888888888888877777764
No 122
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.46 E-value=1.6e-07 Score=74.16 Aligned_cols=61 Identities=13% Similarity=0.007 Sum_probs=44.6
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|++ +++|....+++|+|.++.++|+|++ +..+++|++++|++..+|+.+|.++.
T Consensus 483 ~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~ 545 (681)
T 2pzi_A 483 YDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARS 545 (681)
T ss_dssp HHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 8888888888 6666677777777777777777777 77777777777777777777776664
No 123
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.45 E-value=1.2e-06 Score=59.25 Aligned_cols=52 Identities=10% Similarity=0.127 Sum_probs=49.2
Q ss_pred hhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 79 LIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 79 ~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
..|....++.++|.++..+|+|++|+..++++++++|++..+++..|.++..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 185 (258)
T 3uq3_A 134 VNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK 185 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred cCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH
Confidence 6788999999999999999999999999999999999999999999998763
No 124
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.45 E-value=5.4e-07 Score=65.33 Aligned_cols=62 Identities=21% Similarity=0.196 Sum_probs=46.4
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..+++ ++.|....++.+++.++.++|++++|+..++++++++|++..+|++.|.++.
T Consensus 321 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~a~~~lg~~~~ 384 (388)
T 1w3b_A 321 IEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLK 384 (388)
T ss_dssp HHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHhHHHHHH
Confidence 5566666665 5567777777888888888888888888888888888888888888777764
No 125
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.44 E-value=1.8e-07 Score=61.01 Aligned_cols=60 Identities=15% Similarity=0.099 Sum_probs=54.7
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKC 127 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a 127 (131)
|.+|+..+.. +..|....++.++|.+|..+|+|++|+..+.++++++|++..+++..|.+
T Consensus 26 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 87 (177)
T 2e2e_A 26 PEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATV 87 (177)
T ss_dssp -CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 6777777777 66788899999999999999999999999999999999999999999998
No 126
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.44 E-value=2.4e-07 Score=57.53 Aligned_cols=52 Identities=25% Similarity=0.122 Sum_probs=43.7
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHH
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIK 119 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~k 119 (131)
|.+|+..|++ +++|....++.++|.++..+|++++|+..++++++++|++.+
T Consensus 67 ~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 67 DGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 8999999999 889999999999999999999999999999999999998764
No 127
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.44 E-value=9e-07 Score=51.00 Aligned_cols=49 Identities=27% Similarity=0.370 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 82 ERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 82 ~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
....++.++|.++..+++|++|+..+.+++.++|++..+++..|.++..
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 55 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK 55 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999998864
No 128
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.43 E-value=1.5e-06 Score=52.75 Aligned_cols=63 Identities=21% Similarity=0.187 Sum_probs=53.8
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..+.+ ...|....++.++|.++..+|++++|+..+++++..+|++..+++..|.++..
T Consensus 51 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 115 (136)
T 2fo7_A 51 YDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 115 (136)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 7888888887 56677788888999999999999999999999999999999999888887753
No 129
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.43 E-value=1.7e-07 Score=68.12 Aligned_cols=60 Identities=10% Similarity=0.004 Sum_probs=43.3
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKC 127 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a 127 (131)
|.+|+.+|++ +++|.+..+++|+|.+|..+|+|++|+.++.++++++|++..++...+.+
T Consensus 246 ~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l 307 (338)
T 2if4_A 246 YDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRAL 307 (338)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 8999999998 78899999999999999999999999999999999999999988877655
No 130
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.42 E-value=5.5e-07 Score=63.17 Aligned_cols=61 Identities=16% Similarity=0.230 Sum_probs=57.1
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
|.+|+.++++ ++.|....++.++|.++.++|++++|+..++++++++|++..+++..|.++
T Consensus 252 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 314 (330)
T 3hym_B 252 YAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCI 314 (330)
T ss_dssp HHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHH
Confidence 8899999988 777888999999999999999999999999999999999999999999987
No 131
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.41 E-value=1.6e-06 Score=58.34 Aligned_cols=62 Identities=13% Similarity=-0.032 Sum_probs=42.9
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..+.+ ++.|....++.++|.++..+|++++|+..++++++.+|++..+++..|.++.
T Consensus 73 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 136 (243)
T 2q7f_A 73 LERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLV 136 (243)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 7777777776 5556666667777777777777777777777777777777777766666654
No 132
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.41 E-value=1.9e-06 Score=55.30 Aligned_cols=61 Identities=26% Similarity=0.171 Sum_probs=30.6
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
|.+|+.++++ ...|....++.++|.++.++|++++|+..+.++++.+|++..+++..|.++
T Consensus 92 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 154 (186)
T 3as5_A 92 YDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSY 154 (186)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHH
Confidence 4444444444 333444455555555555555555555555555555555555555555444
No 133
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.40 E-value=1.9e-06 Score=57.09 Aligned_cols=62 Identities=15% Similarity=0.021 Sum_probs=39.5
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..+.+ +..|....++.++|.++..+|++++|+..++++++++|++..+++..|.++.
T Consensus 24 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 87 (225)
T 2vq2_A 24 YRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLC 87 (225)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 5666666665 4455556666666666666666666666666666666666666666666554
No 134
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.40 E-value=2.1e-06 Score=55.11 Aligned_cols=63 Identities=14% Similarity=0.053 Sum_probs=58.9
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+.++.+ +..|....++.++|.++..+|++++|+..+++++..+|++..+++..|.++..
T Consensus 58 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 122 (186)
T 3as5_A 58 VDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDN 122 (186)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH
Confidence 9999999998 67788899999999999999999999999999999999999999999988753
No 135
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.38 E-value=3e-06 Score=51.35 Aligned_cols=63 Identities=21% Similarity=0.187 Sum_probs=57.4
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..+.+ +..+....++.++|.++...|++++|+..+++++..+|++..+++..|.++..
T Consensus 17 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 17 YDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 8899998888 56677888999999999999999999999999999999999999999988753
No 136
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.38 E-value=6.3e-07 Score=67.79 Aligned_cols=63 Identities=13% Similarity=-0.002 Sum_probs=59.6
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHh--------CChHHHHHHHHHHHhhCC---CCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKL--------GSLEPALMSLENVLNLDP---NNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl--------~~~~~a~~~~~~al~~dp---~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ ++.|....++.|+|.+|..+ |+|++|+..++++++++| ++..+|+.+|.++..
T Consensus 195 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~ 270 (474)
T 4abn_A 195 VMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKY 270 (474)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHH
Confidence 8899999998 88899999999999999999 999999999999999999 999999999998864
No 137
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.38 E-value=9.3e-07 Score=67.11 Aligned_cols=60 Identities=25% Similarity=0.334 Sum_probs=57.4
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKC 127 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a 127 (131)
|.+|+..+++ +++|....++.|+|.+|.++|+|++|+..++++++++|++..+++..+.+
T Consensus 56 ~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~ 117 (477)
T 1wao_1 56 YGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 117 (477)
T ss_dssp HHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9999999999 88899999999999999999999999999999999999999999988877
No 138
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.37 E-value=2.8e-06 Score=52.04 Aligned_cols=58 Identities=21% Similarity=0.092 Sum_probs=51.4
Q ss_pred HHHHHHHHHH--Hhhhhh---HHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy18096 68 GILASQELLD--SLIKER---INCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKA 125 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~---~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg 125 (131)
|.+|+..|++ ...|.. ..++.++|.++.++|++++|+..+++++..+|++..+..-+.
T Consensus 55 ~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~ 117 (129)
T 2xev_A 55 FQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQE 117 (129)
T ss_dssp HHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHH
Confidence 9999999998 666766 889999999999999999999999999999999987765443
No 139
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.37 E-value=3.7e-06 Score=58.84 Aligned_cols=62 Identities=19% Similarity=0.140 Sum_probs=58.4
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.++++ +..|....++.++|.++..+|++++|+..++++++++|++..+++..|.++.
T Consensus 37 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 100 (327)
T 3cv0_A 37 LAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 100 (327)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHH
Confidence 9999999998 6778899999999999999999999999999999999999999999998875
No 140
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.35 E-value=4.3e-06 Score=50.72 Aligned_cols=60 Identities=10% Similarity=0.050 Sum_probs=52.2
Q ss_pred HHHHHHHHHH--Hhhhhh-------HHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLD--SLIKER-------INCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~-------~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
|.+|+.++.+ .+.|.. ..++.++|.++.++|++++|+..+.++++++| +...+...+.+.
T Consensus 54 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~ 122 (131)
T 1elr_A 54 YNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAE 122 (131)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHH
Confidence 8899998888 555555 88999999999999999999999999999999 688887777664
No 141
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.35 E-value=1.8e-06 Score=62.54 Aligned_cols=62 Identities=21% Similarity=0.146 Sum_probs=41.5
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..|.+ +..|....++.|++.++.++|++++|+..++++++++|++..+|+..|.++.
T Consensus 151 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 214 (388)
T 1w3b_A 151 LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLK 214 (388)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 6666666666 5556666667777777777777777777777777777776666666666553
No 142
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.35 E-value=1.9e-06 Score=66.12 Aligned_cols=63 Identities=16% Similarity=-0.027 Sum_probs=59.5
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|++ ++.|....++.|+|.+|.++|++++|+..++++++++|++..+++..|.++..
T Consensus 73 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 137 (568)
T 2vsy_A 73 HAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRR 137 (568)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 8999999998 78899999999999999999999999999999999999999999999998753
No 143
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.33 E-value=2.7e-06 Score=57.27 Aligned_cols=62 Identities=21% Similarity=0.156 Sum_probs=43.3
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..+.+ +..|....++.++|.++.++|++++|+..++++++++|++..+++..|.++.
T Consensus 107 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 170 (243)
T 2q7f_A 107 YKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLA 170 (243)
T ss_dssp HHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 7777777777 5555566667777777777777777777777777777777777776666654
No 144
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.32 E-value=2.9e-06 Score=59.89 Aligned_cols=62 Identities=18% Similarity=0.062 Sum_probs=57.4
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..+++ +..|....++.++|.++.++|++++|+..++++++++|++..+++..|.++.
T Consensus 136 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 199 (359)
T 3ieg_A 136 YTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYY 199 (359)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 8999999988 7778889999999999999999999999999999999999999999998875
No 145
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.30 E-value=3.7e-06 Score=58.79 Aligned_cols=63 Identities=16% Similarity=0.161 Sum_probs=55.0
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+.++.+ +..|....++.++|.++..+|++++|+..++++++++|++..+++..|.++..
T Consensus 188 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 252 (327)
T 3cv0_A 188 YDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSN 252 (327)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 8888888887 66778888899999999999999999999999999999999999988887753
No 146
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.29 E-value=3.8e-06 Score=54.87 Aligned_cols=60 Identities=18% Similarity=0.083 Sum_probs=52.6
Q ss_pred HHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC--HHHHHHHHHhhh
Q psy18096 70 LASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN--IKALQRKAKCLI 129 (131)
Q Consensus 70 ~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~--~ka~~rrg~a~~ 129 (131)
.|+..+++ ++.|....++.++|.++..+|++++|+..+.++++++|++ ..+++..|.++.
T Consensus 92 ~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~ 155 (176)
T 2r5s_A 92 PELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILS 155 (176)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHH
Confidence 35677766 6789999999999999999999999999999999999976 668988888764
No 147
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.28 E-value=4.4e-06 Score=55.33 Aligned_cols=42 Identities=21% Similarity=0.137 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q psy18096 85 NCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAK 126 (131)
Q Consensus 85 ~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~ 126 (131)
.++.++|.++.++|++++|+..+.++++.+|++..+++..|.
T Consensus 114 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 155 (225)
T 2vq2_A 114 IANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELAR 155 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHH
Confidence 333444444444444444444444444444444444443333
No 148
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.27 E-value=2.9e-06 Score=64.58 Aligned_cols=63 Identities=21% Similarity=0.108 Sum_probs=58.1
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|++.+++ ++.|....+|.+++.+|.++|+|++|+..++++++++|++..++...+.+|..
T Consensus 532 ~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~ 596 (597)
T 2xpi_A 532 YDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLLKRALEE 596 (597)
T ss_dssp HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhc
Confidence 8899999988 67788999999999999999999999999999999999999999999998864
No 149
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.26 E-value=2.6e-06 Score=58.77 Aligned_cols=62 Identities=16% Similarity=0.054 Sum_probs=50.3
Q ss_pred HHHHHHHHHH--HhhhhhHHH-----------------HHHHHHHHHHhCChHHHHHHHHHHHhhCCC---CHHHHHHHH
Q psy18096 68 GILASQELLD--SLIKERINC-----------------YNNLAQAQIKLGSLEPALMSLENVLNLDPN---NIKALQRKA 125 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~-----------------~~N~a~~~~kl~~~~~a~~~~~~al~~dp~---~~ka~~rrg 125 (131)
|.+|+..|++ +..|....+ +.++|.+|.++|+|++|+..++++++.+|+ ...++++.|
T Consensus 113 ~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~ 192 (261)
T 3qky_A 113 TRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAM 192 (261)
T ss_dssp HHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHH
Confidence 6777777777 333333222 389999999999999999999999999998 578999999
Q ss_pred Hhhh
Q psy18096 126 KCLI 129 (131)
Q Consensus 126 ~a~~ 129 (131)
.++.
T Consensus 193 ~~~~ 196 (261)
T 3qky_A 193 RAYI 196 (261)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9885
No 150
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.26 E-value=4e-06 Score=50.80 Aligned_cols=50 Identities=14% Similarity=-0.041 Sum_probs=46.9
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN 117 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~ 117 (131)
|.+|+..|.+ ++.|....++.++|.+|.++|++++|+..+.++++++|++
T Consensus 35 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 86 (115)
T 2kat_A 35 FDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSR 86 (115)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcccc
Confidence 9999999999 7789999999999999999999999999999999998854
No 151
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.25 E-value=5.8e-06 Score=56.15 Aligned_cols=61 Identities=16% Similarity=0.097 Sum_probs=34.3
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHh--hCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLN--LDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~--~dp~~~ka~~rrg~a~ 128 (131)
|.+|+..+.+ ++.|....++.++|.++..+|++++|+..+++++. .+|.+..+++..|.++
T Consensus 87 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~ 151 (252)
T 2ho1_A 87 PKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVS 151 (252)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHH
Confidence 6666666665 44444555555555555555555555555555555 5555555555555544
No 152
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.25 E-value=2.3e-06 Score=60.33 Aligned_cols=63 Identities=11% Similarity=0.029 Sum_probs=52.3
Q ss_pred HHHHHHHHHH---------HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC------HHHHHHHHHhhhc
Q psy18096 68 GILASQELLD---------SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN------IKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~---------~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~------~ka~~rrg~a~~~ 130 (131)
|.+|+.+|.+ ...+....+++|+|.+|.++|+|++|+..++++|++.++. ..+|+..|.++..
T Consensus 171 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~ 248 (293)
T 3u3w_A 171 LKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRK 248 (293)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 6777777766 2245667799999999999999999999999999987554 8899999998863
No 153
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.24 E-value=4.3e-06 Score=57.33 Aligned_cols=63 Identities=11% Similarity=0.123 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHh-h----hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLDSL-I----KERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~~~-~----~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..+++-+ . .....++.++|.++..+|++++|+..++++++++|++..+|+..|.++..
T Consensus 53 ~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 120 (272)
T 3u4t_A 53 YDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYN 120 (272)
T ss_dssp HHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH
Confidence 899999988821 1 22356799999999999999999999999999999999999999998764
No 154
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.24 E-value=3.2e-06 Score=52.28 Aligned_cols=51 Identities=8% Similarity=0.022 Sum_probs=46.7
Q ss_pred hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 80 IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 80 ~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
.+..+..+.++|.++.+.|+|++|+..+.+++.++|++..+|+.+|.++..
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 55 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK 55 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH
Confidence 456778999999999999999999999999999999999999999998863
No 155
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.23 E-value=3e-06 Score=57.57 Aligned_cols=63 Identities=16% Similarity=-0.003 Sum_probs=58.3
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+..|.+ +..|....++.++|.++.++|++++|+..+.++++++|++..+++..|.++..
T Consensus 53 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 117 (252)
T 2ho1_A 53 TEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYE 117 (252)
T ss_dssp TGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH
Confidence 8889998888 66788899999999999999999999999999999999999999999988753
No 156
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.23 E-value=6.2e-06 Score=52.08 Aligned_cols=57 Identities=23% Similarity=0.146 Sum_probs=47.8
Q ss_pred HHHHHHHHHH--Hhh-h-hhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHH
Q psy18096 68 GILASQELLD--SLI-K-ERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRK 124 (131)
Q Consensus 68 y~~Ai~~~~~--~~~-~-~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rr 124 (131)
=+++|.++.. ... | ....+++.+|..+.|+|+|.+|++.|+..|+.+|+|..|.--+
T Consensus 54 ~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 54 IRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4678888887 222 4 6778999999999999999999999999999999998876433
No 157
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.23 E-value=3.6e-06 Score=65.33 Aligned_cols=62 Identities=10% Similarity=-0.016 Sum_probs=51.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhC--ChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLG--SLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~--~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|++|+..++. +.+|.+..+|++|+.+..+++ +|++++..|+++|++||.|..||..|+.++.
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~ 154 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAA 154 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHH
Confidence 6677777777 777888888888888888888 6788888888888888888888888887654
No 158
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.23 E-value=5.7e-06 Score=58.43 Aligned_cols=63 Identities=13% Similarity=0.043 Sum_probs=49.8
Q ss_pred HHHHHHHHHH--Hhhhh------hHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHH-------HHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKE------RINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIK-------ALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~------~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~k-------a~~rrg~a~~~ 130 (131)
|.+|+.+|++ ++.+. ...++.|+|.++.++|+|++|+..+++++.++|++.. +|++.|.++..
T Consensus 134 ~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~ 211 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLA 211 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHH
Confidence 5667777766 33332 2678999999999999999999999999999987643 67888887753
No 159
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.20 E-value=6.1e-06 Score=57.75 Aligned_cols=62 Identities=10% Similarity=-0.041 Sum_probs=42.0
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..+.+ ++.|.....+.++|.++..+|++++|+..++++++.+|++..+++..|.++.
T Consensus 141 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 204 (330)
T 3hym_B 141 HDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAF 204 (330)
T ss_dssp HHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 6666666666 4555556666667777777777777777777777777777777777666654
No 160
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.20 E-value=5.2e-06 Score=54.20 Aligned_cols=54 Identities=11% Similarity=-0.062 Sum_probs=45.8
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHH
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQ 122 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~ 122 (131)
|.+|+..|++ +.+|.+..++.++|.++..+|++++|+..+++++..+| +...+.
T Consensus 22 ~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~ 77 (176)
T 2r5s_A 22 HAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKS 77 (176)
T ss_dssp HHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHH
T ss_pred HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHH
Confidence 8999999988 88899999999999999999999999888888877777 655443
No 161
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.20 E-value=6.7e-06 Score=60.32 Aligned_cols=58 Identities=12% Similarity=0.122 Sum_probs=27.0
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKA 125 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg 125 (131)
|.+|+..+++ ++.|....++.++|.++.++|++++|+..++++++++|++..++...+
T Consensus 311 ~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 370 (450)
T 2y4t_A 311 PVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLE 370 (450)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 4444444444 333444444444444444444444444444444444444444444444
No 162
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.18 E-value=4.4e-06 Score=61.85 Aligned_cols=62 Identities=13% Similarity=0.045 Sum_probs=56.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|++++++ ++.|....++.|+|.+|.++|++++|+..+.++++.+|++..+++..|.++.
T Consensus 229 ~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~ 292 (472)
T 4g1t_A 229 EGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYR 292 (472)
T ss_dssp -CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 6778888877 7788999999999999999999999999999999999999999999998763
No 163
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.18 E-value=5e-06 Score=48.88 Aligned_cols=44 Identities=23% Similarity=0.225 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHH-HHHHHHHhhhc
Q psy18096 87 YNNLAQAQIKLGSLEPALMSLENVLNLDPNNIK-ALQRKAKCLIL 130 (131)
Q Consensus 87 ~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~k-a~~rrg~a~~~ 130 (131)
..++|.++.+.|+|++|+..++++++.+|++.. +|+.+|.++..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~ 47 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRK 47 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999 99999998863
No 164
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.18 E-value=9.4e-07 Score=52.36 Aligned_cols=51 Identities=22% Similarity=0.246 Sum_probs=46.3
Q ss_pred hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 80 IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 80 ~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
+|....++.++|.++..+|+|++|+..++++++++|++..+++.+|.++..
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~ 52 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYN 52 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH
Confidence 355667889999999999999999999999999999999999999998763
No 165
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.14 E-value=6.3e-06 Score=64.01 Aligned_cols=62 Identities=13% Similarity=0.096 Sum_probs=57.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCC----------hHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGS----------LEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~----------~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
.++|+..+++ ++.|....+|++|+.+..++++ +++++..++++|+.+|+|..+|+.|+.++.
T Consensus 45 ~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~ 118 (567)
T 1dce_A 45 DESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118 (567)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 4677887777 8889999999999999999998 999999999999999999999999998874
No 166
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.13 E-value=1e-05 Score=57.18 Aligned_cols=52 Identities=21% Similarity=0.050 Sum_probs=46.5
Q ss_pred HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC--HHHHHHHHHhhh
Q psy18096 78 SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN--IKALQRKAKCLI 129 (131)
Q Consensus 78 ~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~--~ka~~rrg~a~~ 129 (131)
...|....++.|+|.++..+|++++|+..+.+++..+|++ ..++.+.|.++.
T Consensus 213 ~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~ 266 (287)
T 3qou_A 213 AENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILA 266 (287)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHH
T ss_pred hcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHH
Confidence 4468889999999999999999999999999999999998 888888888764
No 167
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.12 E-value=1.7e-05 Score=50.40 Aligned_cols=56 Identities=21% Similarity=0.210 Sum_probs=48.1
Q ss_pred HHHHHHHHHH--Hhhh-hhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHH
Q psy18096 68 GILASQELLD--SLIK-ERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQR 123 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~-~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~r 123 (131)
..++|.+++. ...+ ....+++-+|.++.|+|+|.+|++.|+.+|+.+|+|..|.--
T Consensus 59 ~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~L 117 (134)
T 3o48_A 59 ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 117 (134)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHH
Confidence 6788988877 3334 568899999999999999999999999999999999877543
No 168
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.11 E-value=7.7e-06 Score=61.23 Aligned_cols=62 Identities=18% Similarity=0.101 Sum_probs=34.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+..+.+ +..|....++.++|.++..+|+|++|+..++++++++|++..+++..|.++.
T Consensus 292 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 355 (537)
T 3fp2_A 292 SQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLY 355 (537)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3444444444 3445555555566666666666666666666666666665555555555543
No 169
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.08 E-value=1e-05 Score=58.32 Aligned_cols=61 Identities=10% Similarity=-0.081 Sum_probs=57.9
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhC--ChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLG--SLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~--~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
..+|+.+++. +++|...+++++|+.+...++ .+++++..++++|..+|++..+|+.|+.++
T Consensus 49 s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL 113 (306)
T 3dra_A 49 SERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLII 113 (306)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHH
Confidence 4688988888 889999999999999999999 999999999999999999999999999887
No 170
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.08 E-value=1.3e-05 Score=54.41 Aligned_cols=63 Identities=13% Similarity=0.055 Sum_probs=49.6
Q ss_pred HHHHHHHHHH--Hhhhhh-----------------HHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCH---HHHHHHH
Q psy18096 68 GILASQELLD--SLIKER-----------------INCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNI---KALQRKA 125 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~-----------------~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~---ka~~rrg 125 (131)
+.+|+..|++ +..|.. .....++|.+|.+.|+|.+|+..++++++..|++. ++++++|
T Consensus 112 ~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~ 191 (225)
T 2yhc_A 112 ARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLME 191 (225)
T ss_dssp HHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHH
Confidence 6777777777 222222 23346889999999999999999999999999886 7899999
Q ss_pred Hhhhc
Q psy18096 126 KCLIL 130 (131)
Q Consensus 126 ~a~~~ 130 (131)
.++..
T Consensus 192 ~~~~~ 196 (225)
T 2yhc_A 192 NAYRQ 196 (225)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98864
No 171
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.03 E-value=1.3e-05 Score=54.63 Aligned_cols=62 Identities=23% Similarity=0.186 Sum_probs=53.9
Q ss_pred HHHHHHHHHH--Hh--------hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh--------CCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SL--------IKERINCYNNLAQAQIKLGSLEPALMSLENVLNL--------DPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~--------~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~--------dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.++.+ ++ .+....++.|+|.++..+|++++|+..+.+++.+ +|....+++..|.++.
T Consensus 101 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 180 (283)
T 3edt_B 101 YKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYL 180 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 7777777766 22 4778899999999999999999999999999999 8888999999998875
No 172
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.02 E-value=1.9e-05 Score=50.80 Aligned_cols=56 Identities=21% Similarity=0.210 Sum_probs=47.1
Q ss_pred HHHHHHHHHH--Hhhh-hhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHH
Q psy18096 68 GILASQELLD--SLIK-ERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQR 123 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~-~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~r 123 (131)
=+++|.+++. ...| ....+++.+|.++.|+|+|.+|.+.|+..|+.+|+|..|.--
T Consensus 58 i~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~L 116 (144)
T 1y8m_A 58 ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 116 (144)
T ss_dssp HHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred HHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 4678888887 3233 577899999999999999999999999999999999777543
No 173
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.02 E-value=2.1e-05 Score=56.69 Aligned_cols=62 Identities=13% Similarity=-0.009 Sum_probs=55.8
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChH--HHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLE--PALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~--~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
+.+++.++++ +.+|.+..++++|+.+..+++.|+ +++..|+++|+.||.|..||..|+.++.
T Consensus 126 ~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~ 191 (306)
T 3dra_A 126 PYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLF 191 (306)
T ss_dssp THHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 4566666666 778999999999999999999999 9999999999999999999999998764
No 174
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.01 E-value=2.7e-05 Score=56.76 Aligned_cols=61 Identities=10% Similarity=-0.016 Sum_probs=44.8
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCC--hHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGS--LEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~--~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
|.+++.+++. ..+|.+..+|++|+.+..+++. |++++..|+++|+.||.|..||+.|+.++
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl 154 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVA 154 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 4566666666 5667777777777777777773 77777888888888888887877777664
No 175
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.00 E-value=2.4e-05 Score=56.75 Aligned_cols=63 Identities=11% Similarity=-0.085 Sum_probs=51.4
Q ss_pred HHHHHHHHHH--H------hhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHh-----hC-CCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--S------LIKERINCYNNLAQAQIKLGSLEPALMSLENVLN-----LD-PNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~------~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~-----~d-p~~~ka~~rrg~a~~~ 130 (131)
|.+|+.++.+ + -.+....++.|+|.+|..+|++++|+..+.++++ .+ |....+++..|.++..
T Consensus 200 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (383)
T 3ulq_A 200 YEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYK 276 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Confidence 6777777766 2 2345567899999999999999999999999999 57 8889999999988763
No 176
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.98 E-value=1.7e-05 Score=55.84 Aligned_cols=63 Identities=13% Similarity=0.053 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHh--------h-hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCC------CHHHHHHHHHhhhc
Q psy18096 68 GILASQELLDSL--------I-KERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPN------NIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~~~--------~-~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~------~~ka~~rrg~a~~~ 130 (131)
|.+|+.+|++-+ . ...+.+++|+|.+|.++|+|++|+..+++++.+.++ -..+|++.|.++..
T Consensus 171 ~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~ 248 (293)
T 2qfc_A 171 LKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRK 248 (293)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 777777777711 1 123379999999999999999999999999998643 27889999988753
No 177
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.97 E-value=3.2e-05 Score=54.81 Aligned_cols=61 Identities=15% Similarity=0.028 Sum_probs=51.9
Q ss_pred HHHHHHHHH--H-hhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHH-HHHHHHHhhh
Q psy18096 69 ILASQELLD--S-LIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIK-ALQRKAKCLI 129 (131)
Q Consensus 69 ~~Ai~~~~~--~-~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~k-a~~rrg~a~~ 129 (131)
.+|+..|++ + +.|....+|.+++..+.++|++++|+..++++|+++|++.. +|+..|..+.
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 145 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR 145 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHH
Confidence 678888887 5 57888889999999999999999999999999999998886 8888887653
No 178
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=97.97 E-value=3.8e-05 Score=56.76 Aligned_cols=62 Identities=11% Similarity=0.033 Sum_probs=49.7
Q ss_pred HHHHHHHHHH-----------HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhC--------CCCHHHHHHHHHhh
Q psy18096 68 GILASQELLD-----------SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLD--------PNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~-----------~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~d--------p~~~ka~~rrg~a~ 128 (131)
|++|++.|++ +.++.....|.|+|.+|..+|+|++|+.++++++++. +....++..+|.++
T Consensus 67 ~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~ 146 (472)
T 4g1t_A 67 NEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTR 146 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHH
Confidence 7777777776 2256678899999999999999999999999999873 35567777777665
Q ss_pred h
Q psy18096 129 I 129 (131)
Q Consensus 129 ~ 129 (131)
+
T Consensus 147 ~ 147 (472)
T 4g1t_A 147 L 147 (472)
T ss_dssp H
T ss_pred H
Confidence 3
No 179
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.97 E-value=3.6e-05 Score=56.49 Aligned_cols=62 Identities=11% Similarity=-0.012 Sum_probs=49.5
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhC-ChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLG-SLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~-~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
..+|+.+++. .++|.+..++++|+.+...++ .+++++..++++|..+|+|..+|+.|+.++.
T Consensus 70 se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~ 134 (349)
T 3q7a_A 70 SERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLD 134 (349)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 4677777777 777888888888888888888 4888888888888888888888888887664
No 180
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.95 E-value=2.5e-05 Score=55.10 Aligned_cols=63 Identities=14% Similarity=0.038 Sum_probs=49.6
Q ss_pred HHHHHHHHHH--Hhhh------hhHHHHHHHHHHHHHh-CChHHHHHHHHHHHhhCCCC------HHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIK------ERINCYNNLAQAQIKL-GSLEPALMSLENVLNLDPNN------IKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~------~~~~~~~N~a~~~~kl-~~~~~a~~~~~~al~~dp~~------~ka~~rrg~a~~~ 130 (131)
|.+|+.+|++ ++.+ ....++.|+|.+|..+ |++++|+..+++||++.|++ ..++.+.|.++..
T Consensus 93 ~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~ 170 (292)
T 1qqe_A 93 SVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKAL 170 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Confidence 6677777766 2222 2367899999999995 99999999999999998865 5678888887753
No 181
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.95 E-value=2.6e-05 Score=56.58 Aligned_cols=63 Identities=14% Similarity=-0.100 Sum_probs=51.5
Q ss_pred HHHHHHHHHH--H------hhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHh-----hCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--S------LIKERINCYNNLAQAQIKLGSLEPALMSLENVLN-----LDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~------~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~-----~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+.++.+ + -.+....++.|+|.+|..+|++++|+..+.+++. .+|....+++..|.++..
T Consensus 198 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~ 273 (378)
T 3q15_A 198 YDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCK 273 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHH
Confidence 6777777766 1 2235667899999999999999999999999999 788889999999988753
No 182
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.95 E-value=2.6e-05 Score=53.09 Aligned_cols=63 Identities=24% Similarity=0.098 Sum_probs=54.9
Q ss_pred HHHHHHHHHH--Hh--------hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh--------CCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SL--------IKERINCYNNLAQAQIKLGSLEPALMSLENVLNL--------DPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~--------~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~--------dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.++.+ ++ .+....++.|+|.++..+|++++|+..+.+++.+ +|....+++..|.++.
T Consensus 59 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 138 (283)
T 3edt_B 59 YKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQ 138 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 7888888877 22 3778889999999999999999999999999998 6888999999998876
Q ss_pred c
Q psy18096 130 L 130 (131)
Q Consensus 130 ~ 130 (131)
.
T Consensus 139 ~ 139 (283)
T 3edt_B 139 N 139 (283)
T ss_dssp T
T ss_pred H
Confidence 4
No 183
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=97.95 E-value=4.5e-05 Score=55.61 Aligned_cols=62 Identities=6% Similarity=0.014 Sum_probs=58.0
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCC-hHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGS-LEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~-~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+++.++++ +.+|.+..+|++|+.+..+++. +++++..++++|+.||.|.-||..|+.++.
T Consensus 126 ~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~ 190 (331)
T 3dss_A 126 WARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLP 190 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 7889998888 8899999999999999999999 699999999999999999999999998764
No 184
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.92 E-value=3e-05 Score=55.01 Aligned_cols=62 Identities=8% Similarity=0.038 Sum_probs=41.5
Q ss_pred HHHHHHHHHH--Hhh------hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC------HHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLI------KERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN------IKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~------~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~------~ka~~rrg~a~~ 129 (131)
|.+|+.+|++ ++. .....++.|+|.+|.++|+|++|+..+++++.+.|++ ..+++..|.+++
T Consensus 131 ~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~ 206 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQL 206 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHH
Confidence 5555555555 222 2235678888888888888888888888888876544 346666666654
No 185
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.87 E-value=3.1e-05 Score=54.54 Aligned_cols=49 Identities=8% Similarity=0.036 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 82 ERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 82 ~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
..+..+.++|.++.+.|+|++|+..+++++.++|++..+|+.+|.++..
T Consensus 2 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 50 (281)
T 2c2l_A 2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK 50 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999864
No 186
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.87 E-value=2.5e-05 Score=57.91 Aligned_cols=63 Identities=17% Similarity=-0.025 Sum_probs=52.5
Q ss_pred HHHHHHHHHH--HhhhhhH------HHHHHHHHHHHH---hCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERI------NCYNNLAQAQIK---LGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~------~~~~N~a~~~~k---l~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+.++.+ ++.|... .++.++|.++.+ +|++++|+..+++++.++|++..+++..|.++..
T Consensus 388 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 461 (514)
T 2gw1_A 388 FDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQ 461 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 7777777777 4455553 389999999999 9999999999999999999999999999988753
No 187
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.87 E-value=4.9e-05 Score=55.83 Aligned_cols=62 Identities=6% Similarity=-0.093 Sum_probs=57.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHh-C-ChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKL-G-SLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl-~-~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
+++++.+++. ...|.+..+|++|..+..++ + ++++++..|+++|+.||+|..||+.|+.++.
T Consensus 105 l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~ 170 (349)
T 3q7a_A 105 LEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYS 170 (349)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 7888888887 77899999999999999999 8 9999999999999999999999999998763
No 188
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.87 E-value=5.1e-05 Score=57.65 Aligned_cols=61 Identities=8% Similarity=-0.096 Sum_probs=29.8
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
|.+|+++|++ ++.|....++++++.+|.+.|++++|+..++++++.+|++..+|+..|.++
T Consensus 389 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 451 (597)
T 2xpi_A 389 ISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQH 451 (597)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 5555555554 334444444445555555555555555555555554444444444444443
No 189
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.85 E-value=3.1e-05 Score=54.62 Aligned_cols=45 Identities=24% Similarity=0.031 Sum_probs=38.3
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
+.+|+..|.+ +++|.+..++.++|.+++.+|++++|+..+++++.
T Consensus 133 ~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~ 179 (287)
T 3qou_A 133 YTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPL 179 (287)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCG
T ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCch
Confidence 8999999998 78899999999999999999999988766655533
No 190
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.79 E-value=8.1e-05 Score=46.27 Aligned_cols=30 Identities=37% Similarity=0.406 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhCChHHHHHHHHHHHhhC
Q psy18096 85 NCYNNLAQAQIKLGSLEPALMSLENVLNLD 114 (131)
Q Consensus 85 ~~~~N~a~~~~kl~~~~~a~~~~~~al~~d 114 (131)
.++.++|.++..+|++++|+..+++++.+.
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 79 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLA 79 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 355555555555555555555555555543
No 191
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.78 E-value=0.00014 Score=50.19 Aligned_cols=59 Identities=10% Similarity=-0.077 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHH----hCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIK----LGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~k----l~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
|.+|+.+|.+-+.+....++.++|.+|.. .+++++|+..+.++++++ ++.+++..|.++
T Consensus 22 ~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~ 84 (273)
T 1ouv_A 22 FTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLY 84 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHH
Confidence 44555555443334444445555555555 555555555555555443 445555544444
No 192
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.75 E-value=8e-05 Score=51.53 Aligned_cols=62 Identities=23% Similarity=0.199 Sum_probs=53.2
Q ss_pred HHHHHHHHHH--Hh--------hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh--------CCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SL--------IKERINCYNNLAQAQIKLGSLEPALMSLENVLNL--------DPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~--------~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~--------dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.++.+ ++ .+....++.++|.++..+|+|++|+..+++++.+ +|....+++..|.++.
T Consensus 127 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~ 206 (311)
T 3nf1_A 127 YKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYL 206 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 7777777776 22 2677889999999999999999999999999998 7888889999988875
No 193
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.73 E-value=0.0001 Score=50.94 Aligned_cols=46 Identities=17% Similarity=0.081 Sum_probs=40.4
Q ss_pred HHHHHHHHHH--Hh--------hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh
Q psy18096 68 GILASQELLD--SL--------IKERINCYNNLAQAQIKLGSLEPALMSLENVLNL 113 (131)
Q Consensus 68 y~~Ai~~~~~--~~--------~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~ 113 (131)
|.+|+.++.+ ++ .+....++.++|.+|.++|++++|+..+++++++
T Consensus 169 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 169 YEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 7888888877 33 6778889999999999999999999999999984
No 194
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.72 E-value=0.00017 Score=50.98 Aligned_cols=61 Identities=13% Similarity=0.019 Sum_probs=52.5
Q ss_pred HHHHHHHHH--HhhhhhHHHHHHHHHHHHH-------hCCh-------HHHHHHHHHHHh-hCCCCHHHHHHHHHhhh
Q psy18096 69 ILASQELLD--SLIKERINCYNNLAQAQIK-------LGSL-------EPALMSLENVLN-LDPNNIKALQRKAKCLI 129 (131)
Q Consensus 69 ~~Ai~~~~~--~~~~~~~~~~~N~a~~~~k-------l~~~-------~~a~~~~~~al~-~dp~~~ka~~rrg~a~~ 129 (131)
++|+..|++ ...|..+.+|.++|..+.. +|++ ++|+..+++|++ ++|++..+|+..|..+.
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~ 110 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEE 110 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 566666666 6679999999999999874 5886 999999999999 79999999999998764
No 195
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.71 E-value=0.00019 Score=48.27 Aligned_cols=61 Identities=11% Similarity=-0.141 Sum_probs=49.7
Q ss_pred HHHHHHHHHH--Hhhh--hhHHHHHHHHHHHHH----hCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIK--ERINCYNNLAQAQIK----LGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~--~~~~~~~N~a~~~~k----l~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
+.+|+.+|.+ +..+ ..+.+++|++.+|.. .+++++|+..+.+++++ |.+..+++..|.+|.
T Consensus 105 ~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~ 173 (212)
T 3rjv_A 105 VAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQ 173 (212)
T ss_dssp HHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 7888888888 3333 348889999999998 88899999999999988 677888888888774
No 196
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.69 E-value=0.00014 Score=47.52 Aligned_cols=62 Identities=10% Similarity=-0.032 Sum_probs=49.5
Q ss_pred HHHHHHHHHH--------HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh---CC----CCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--------SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNL---DP----NNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--------~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~---dp----~~~ka~~rrg~a~~ 129 (131)
|.+|+.++.+ ...+....++.|+|.++..+|++++|+..+.+++.+ .+ ....+++..|.++.
T Consensus 42 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 118 (203)
T 3gw4_A 42 FDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVAL 118 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence 6777777766 245678889999999999999999999999999998 33 33566777777664
No 197
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.68 E-value=8.6e-05 Score=49.99 Aligned_cols=62 Identities=11% Similarity=-0.061 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHH----hCChHHHHHHHHHHHhhCC--CCHHHHHHHHHhhh
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIK----LGSLEPALMSLENVLNLDP--NNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~k----l~~~~~a~~~~~~al~~dp--~~~ka~~rrg~a~~ 129 (131)
+.+|+.+|.+-.++..+.+++|++.+|.. .+++++|+..+.++++.+| +++.+++..|.+|.
T Consensus 69 ~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~ 136 (212)
T 3rjv_A 69 YPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYA 136 (212)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHH
Confidence 55666666665555666777777777776 6777777777777777776 34777777776664
No 198
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=97.67 E-value=1.7e-05 Score=49.20 Aligned_cols=42 Identities=14% Similarity=0.217 Sum_probs=34.5
Q ss_pred CcchhcccCCCcEEEEEEc-CCCCCCCCCCCCCCCCCCceEEEEEeeccc
Q psy18096 1 MDYVLPLMETGEECQIEIT-ARFGYGDKGEPSKSIPPGAKLYYSLTLHSV 49 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~-~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~ 49 (131)
+|.+|..|++||+..|+|+ |.- ||+.+. +++++.|+|+|+++
T Consensus 70 ~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~~------~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 70 FETGLIAMKVNQKKTLALTFPSD-YHVKEL------QSKPVTFEVVLKAI 112 (113)
T ss_dssp HHHHHHTSCSSEEEEECCCCCTT-SSSSGG------GSCCCEEEEEECCB
T ss_pred HHHHHCCCCCCCEEEEEEeCchh-hCcCCC------CCCEEEEEEEEEEE
Confidence 3689999999999999996 444 887663 46889999999876
No 199
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.64 E-value=8.4e-05 Score=53.86 Aligned_cols=62 Identities=18% Similarity=0.102 Sum_probs=40.1
Q ss_pred HHHHHHHHHH--Hhhhhh----HHHHHHHHHHHHHhCChHHHHHHHHHHHhh------CCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKER----INCYNNLAQAQIKLGSLEPALMSLENVLNL------DPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~----~~~~~N~a~~~~kl~~~~~a~~~~~~al~~------dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.+|++ ++.+.. ..++.++|.+|..+|+|++|+..+++++++ +|....+++..|.++.
T Consensus 64 ~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 137 (411)
T 4a1s_A 64 CRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK 137 (411)
T ss_dssp HHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH
Confidence 6777777766 333322 246667777777777777777777777766 5666666666666654
No 200
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.63 E-value=0.00032 Score=48.30 Aligned_cols=60 Identities=8% Similarity=-0.146 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHH----hCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIK----LGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~k----l~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.+|++-+....+.++.|+|.+|.. .+++++|+..++++++.+| ..+++..|.++.
T Consensus 166 ~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a~~~l~~~~~ 229 (273)
T 1ouv_A 166 LKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGGCFNLGAMQY 229 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHHHHHHHHHHH
Confidence 55666666653333455666677777777 7777777777777776654 666666666654
No 201
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.63 E-value=0.00014 Score=52.68 Aligned_cols=63 Identities=11% Similarity=0.146 Sum_probs=49.6
Q ss_pred HHHHHHHHHH--Hh-------hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC------HHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SL-------IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN------IKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~-------~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~------~ka~~rrg~a~~~ 130 (131)
|.+|+.++.+ ++ .+....+++|+|.+|..+|+|++|+..+.+++.+.+.. ..+++..|.++..
T Consensus 159 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 236 (383)
T 3ulq_A 159 TYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNS 236 (383)
T ss_dssp HHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 5666666665 11 56677899999999999999999999999999986543 3588888887753
No 202
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.62 E-value=0.00017 Score=42.88 Aligned_cols=50 Identities=14% Similarity=-0.024 Sum_probs=44.5
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN 117 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~ 117 (131)
..+|..++.+ .++|..+.++..+|..+++.|+|++|+..+.++++.+|.+
T Consensus 25 ~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 25 TDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 4677777777 7889999999999999999999999999999999999874
No 203
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.62 E-value=0.00021 Score=44.27 Aligned_cols=62 Identities=15% Similarity=-0.028 Sum_probs=46.6
Q ss_pred HHHHHHHHHH--Hh------hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCC------CCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SL------IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDP------NNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~------~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp------~~~ka~~rrg~a~~ 129 (131)
|.+|+.++.+ ++ .+....++.|+|.++..+|++++|+..+++++.+.+ ....+++..|.++.
T Consensus 65 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~ 140 (164)
T 3ro3_A 65 FETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYT 140 (164)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHH
Confidence 7777777776 21 233577899999999999999999999999998742 22566777776654
No 204
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.62 E-value=0.00022 Score=42.33 Aligned_cols=51 Identities=22% Similarity=0.140 Sum_probs=45.3
Q ss_pred hhhhHHHHHHHHHHHHHhCC---hHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 80 IKERINCYNNLAQAQIKLGS---LEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 80 ~~~~~~~~~N~a~~~~kl~~---~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
.|.++.++..+|.++...++ .++|...++++|++||++++|++-.|.+++.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~ 55 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI 55 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH
Confidence 46678899999999987766 7999999999999999999999999988764
No 205
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.60 E-value=0.00015 Score=52.52 Aligned_cols=62 Identities=19% Similarity=0.096 Sum_probs=54.0
Q ss_pred HHHHHHHHHH--Hh------hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh------CCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SL------IKERINCYNNLAQAQIKLGSLEPALMSLENVLNL------DPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~------~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~------dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.++.+ ++ .+....++.++|.+|..+|++++|+..+.+++.+ +|....+++..|.++.
T Consensus 102 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 177 (411)
T 4a1s_A 102 YNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYH 177 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Confidence 7788888777 33 5788899999999999999999999999999998 6777889999888875
No 206
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.60 E-value=0.00037 Score=48.84 Aligned_cols=63 Identities=24% Similarity=0.185 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHh-------h-hhhHHHHHHHHHHHHHhCChHHHHHHHHHHH---hhCCCC----HHHHHHHHHhhhc
Q psy18096 68 GILASQELLDSL-------I-KERINCYNNLAQAQIKLGSLEPALMSLENVL---NLDPNN----IKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~~~-------~-~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al---~~dp~~----~ka~~rrg~a~~~ 130 (131)
|.+|+..+.+-+ + .....+++|+|.+|..+|+|++|+..+++++ +..|++ +.+++..|.++..
T Consensus 131 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~ 208 (293)
T 2qfc_A 131 YEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL 208 (293)
T ss_dssp HHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHH
Confidence 667777776611 1 1236689999999999999999999999999 445653 2688999988753
No 207
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.56 E-value=0.00024 Score=50.24 Aligned_cols=54 Identities=13% Similarity=-0.057 Sum_probs=48.6
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHH-HHHHHHHHHhhCCCCHHHH
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEP-ALMSLENVLNLDPNNIKAL 121 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~-a~~~~~~al~~dp~~~ka~ 121 (131)
|.+|+..|.+ +++|.++.++.|++.++..+|++.+ +...++++++++|+++.+.
T Consensus 216 ~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~ 272 (291)
T 3mkr_A 216 WEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIK 272 (291)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHH
Confidence 8999999998 8889999999999999999999987 5678899999999997543
No 208
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.55 E-value=0.00014 Score=50.99 Aligned_cols=63 Identities=21% Similarity=0.173 Sum_probs=48.5
Q ss_pred HHHHHHHHHH--Hhh------hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHh-------hCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLI------KERINCYNNLAQAQIKLGSLEPALMSLENVLN-------LDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~------~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~-------~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|+.++.+ ++. .....+++|+|.+|..+|+|++|+..++++|+ ..+....+++..|.++..
T Consensus 131 ~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~ 208 (293)
T 3u3w_A 131 YEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL 208 (293)
T ss_dssp HHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH
Confidence 7888888887 211 12355899999999999999999999999994 234456788888888753
No 209
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.53 E-value=0.00016 Score=50.15 Aligned_cols=62 Identities=16% Similarity=0.135 Sum_probs=42.0
Q ss_pred HHHHHHHHHH--Hh------hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC------HHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SL------IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN------IKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~------~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~------~ka~~rrg~a~~ 129 (131)
|.+|+.++.+ ++ .+....++.++|.++..+|++++|+..+.+++++.|.. ..+++..|.++.
T Consensus 59 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 134 (338)
T 3ro2_A 59 YAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYH 134 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Confidence 6666666655 11 45556777788888888888888888888888876543 336666666654
No 210
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.52 E-value=0.00026 Score=53.34 Aligned_cols=62 Identities=6% Similarity=-0.113 Sum_probs=50.6
Q ss_pred HHHHHHHHHH----------HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh--------CCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD----------SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNL--------DPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~----------~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~--------dp~~~ka~~rrg~a~~ 129 (131)
|.+|+.+|.+ .-.|..+..++|+|.+|..+|+|++|+..+.++|.+ .|+=...|++.|.+|.
T Consensus 314 ~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~ 393 (433)
T 3qww_A 314 PSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYM 393 (433)
T ss_dssp HHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 7788888877 335778899999999999999999999999999975 2444667777777764
No 211
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.51 E-value=0.00026 Score=50.78 Aligned_cols=62 Identities=19% Similarity=0.073 Sum_probs=43.3
Q ss_pred HHHHHHHHHH--Hh------hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC------HHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SL------IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN------IKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~------~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~------~ka~~rrg~a~~ 129 (131)
|.+|+.++.+ ++ .+....++.|+|.+|..+|++++|+..+++++.+.|.. ..+++..|.++.
T Consensus 203 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 278 (406)
T 3sf4_A 203 FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT 278 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHH
Confidence 6666666665 11 23344578888888888888888888888888777655 667777777664
No 212
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.47 E-value=0.0002 Score=51.33 Aligned_cols=62 Identities=15% Similarity=0.093 Sum_probs=39.1
Q ss_pred HHHHHHHHHH--H------hhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC------HHHHHHHHHhhh
Q psy18096 68 GILASQELLD--S------LIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN------IKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~------~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~------~ka~~rrg~a~~ 129 (131)
|.+|+.++++ + -.+....++.++|.++..+|++++|+..+.+++.+.|.. ..+++..|.++.
T Consensus 63 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 138 (406)
T 3sf4_A 63 YAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYH 138 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHH
Confidence 5555555555 1 134556677777777777777777777777777776543 446666666554
No 213
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.46 E-value=0.001 Score=41.86 Aligned_cols=60 Identities=13% Similarity=-0.128 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHH----hCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIK----LGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~k----l~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
+.+|+++|.+-.+...+.+.+|++.+|.. .+++++|+..+.++.+. .++.|+++.|..|.
T Consensus 41 ~~~A~~~~~~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~ 104 (138)
T 1klx_A 41 KQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQY 104 (138)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHH
Confidence 55677777774445677788888888888 78888888888888766 57788888877764
No 214
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.44 E-value=0.0002 Score=50.75 Aligned_cols=46 Identities=9% Similarity=0.078 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC------HHHHHHHHHhhh
Q psy18096 83 RINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN------IKALQRKAKCLI 129 (131)
Q Consensus 83 ~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~------~ka~~rrg~a~~ 129 (131)
...++.|+|.+|.. |++++|+..+++|+.+.|.. ..++++.|.++.
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~ 166 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLV 166 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHH
Confidence 45678888888888 88888888888888877643 567777777664
No 215
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.38 E-value=0.0005 Score=47.57 Aligned_cols=62 Identities=19% Similarity=0.073 Sum_probs=42.7
Q ss_pred HHHHHHHHHH--Hh------hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC------HHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SL------IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN------IKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~------~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~------~ka~~rrg~a~~ 129 (131)
|.+|+.++++ ++ .+....++.++|.++..+|++++|+..+++++.+.+.. ..+++..|.++.
T Consensus 199 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 274 (338)
T 3ro2_A 199 FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT 274 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Confidence 6666666665 11 23344577888888888888888888888888776655 667777776664
No 216
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=97.38 E-value=4.5e-05 Score=49.93 Aligned_cols=29 Identities=21% Similarity=0.454 Sum_probs=26.9
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGE 29 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~ 29 (131)
+|.+|..|++||+..|+|+|..|||..+.
T Consensus 57 ~eeaL~gm~~Ge~~~v~Ipp~~aYG~~~~ 85 (157)
T 3pr9_A 57 LDEAILEMDVGEEREVVLPPEKAFGKRDP 85 (157)
T ss_dssp HHHHHHHCCTTCEEEEEECGGGTTCCCCG
T ss_pred HHHHHcCCCCCCEEEEEECcHHhcCCCCh
Confidence 47899999999999999999999999884
No 217
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=97.29 E-value=0.00014 Score=47.58 Aligned_cols=28 Identities=29% Similarity=0.395 Sum_probs=26.2
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKG 28 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G 28 (131)
+|.+|..|++||+..|+|+|..|||..+
T Consensus 40 ~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~ 67 (158)
T 3cgm_A 40 LEEALEGREEGEAFQAHVPAEKAYGPHD 67 (158)
T ss_dssp HHHHHTTCBTTCEEEEEECGGGTTCCCC
T ss_pred HHHHHcCCCCCCEEEEEECcHHHcCCCC
Confidence 4789999999999999999999999887
No 218
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=97.24 E-value=9.3e-05 Score=48.09 Aligned_cols=29 Identities=31% Similarity=0.540 Sum_probs=26.7
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGE 29 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~ 29 (131)
+|.+|..|++||+..|+|+|..|||..+.
T Consensus 58 ~eeaL~gm~~Ge~~~v~ipp~~aYG~~~~ 86 (151)
T 1ix5_A 58 FEEAVLDMEVGDEKTVKIPAEKAYGNRNE 86 (151)
T ss_dssp HHHHHHTCCTTCCCEEEECTTTSSCSCCS
T ss_pred HHHHHcCCCCCCEEEEEECcHHHCCCCCc
Confidence 47899999999999999999999999873
No 219
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.23 E-value=0.00064 Score=51.96 Aligned_cols=62 Identities=8% Similarity=-0.175 Sum_probs=50.3
Q ss_pred HHHHHHHHHH----------HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhC-----C---CCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD----------SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLD-----P---NNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~----------~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~d-----p---~~~ka~~rrg~a~~ 129 (131)
|.+|+.+|.+ .-.|..+..++|+|.+|..+|+|++|+..+.++|.+- | +-..++.+.|.+|.
T Consensus 325 ~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~ 404 (490)
T 3n71_A 325 YHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNW 404 (490)
T ss_dssp HHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 8888888877 3357788999999999999999999999999999853 3 33566777777664
No 220
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.22 E-value=0.0011 Score=47.25 Aligned_cols=62 Identities=10% Similarity=-0.221 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHh---hhhh-HHHHHHHHHHHHHhCChHHHHHHHHHHHhhC--CC-CHHHHHHHHHhhh
Q psy18096 68 GILASQELLDSL---IKER-INCYNNLAQAQIKLGSLEPALMSLENVLNLD--PN-NIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~~~---~~~~-~~~~~N~a~~~~kl~~~~~a~~~~~~al~~d--p~-~~ka~~rrg~a~~ 129 (131)
|.+|+..++.-. ++.. ..++.+++.++..+|++++|+..+++++.-. |. ...++|++|.++.
T Consensus 151 ~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~ 219 (282)
T 4f3v_A 151 WTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARR 219 (282)
T ss_dssp HHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHH
Confidence 555555554411 1221 3467777777777777777777777776543 54 5667777777664
No 221
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=97.22 E-value=0.0002 Score=47.40 Aligned_cols=28 Identities=11% Similarity=0.285 Sum_probs=26.2
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKG 28 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G 28 (131)
+|.+|..|++||+..|+|+|..|||+.+
T Consensus 68 ~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 68 LEQHLLGLKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp HHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred HHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 4789999999999999999999999877
No 222
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.21 E-value=0.0007 Score=50.84 Aligned_cols=62 Identities=16% Similarity=0.054 Sum_probs=51.1
Q ss_pred HHHHHHHHHH----------HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhC--------CCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD----------SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLD--------PNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~----------~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~d--------p~~~ka~~rrg~a~~ 129 (131)
|.+|+..+.+ .-.+.....++|+|.+|..+|+|++|+..+.++|.+- |.-...+++.|.+|.
T Consensus 303 ~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~ 382 (429)
T 3qwp_A 303 WEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQL 382 (429)
T ss_dssp HHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHH
Confidence 8889988887 3457788999999999999999999999999999752 334567777777764
No 223
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=97.21 E-value=0.00025 Score=45.99 Aligned_cols=29 Identities=17% Similarity=0.207 Sum_probs=26.7
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGE 29 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~ 29 (131)
+|.+|..|++||+..|+|+|..|||..+.
T Consensus 50 ~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 50 LEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp HHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred HHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 47899999999999999999999999873
No 224
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.14 E-value=0.0011 Score=43.05 Aligned_cols=63 Identities=11% Similarity=0.008 Sum_probs=50.0
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHh------hCCCCHHHHHHHHHhhhc
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLN------LDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~------~dp~~~ka~~rrg~a~~~ 130 (131)
|.+|.+.+.. ........++.++|.++..+|+|++|+..+.+++. ..|....+++..|.++..
T Consensus 8 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 78 (203)
T 3gw4_A 8 YALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERM 78 (203)
T ss_dssp HHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 7788883332 22235788999999999999999999999999999 556677888888887753
No 225
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=97.11 E-value=0.00053 Score=45.43 Aligned_cols=28 Identities=21% Similarity=0.392 Sum_probs=26.2
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKG 28 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G 28 (131)
+|.+|..|++||+..|+|+|..|||..+
T Consensus 45 ~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 45 LETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp HHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred HHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 4789999999999999999999999987
No 226
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.09 E-value=0.0033 Score=45.40 Aligned_cols=48 Identities=15% Similarity=0.070 Sum_probs=41.4
Q ss_pred HHHHHHHHHH--H-----hhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCC
Q psy18096 68 GILASQELLD--S-----LIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDP 115 (131)
Q Consensus 68 y~~Ai~~~~~--~-----~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp 115 (131)
|.+|+.++.+ + ..+....++.|+|.+|.++|++++|+..+++++++.+
T Consensus 238 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 7778777777 2 5567789999999999999999999999999999843
No 227
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=97.09 E-value=0.00017 Score=50.07 Aligned_cols=28 Identities=21% Similarity=0.476 Sum_probs=26.2
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKG 28 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G 28 (131)
+|.+|..|++||+..|+|+|..|||..+
T Consensus 57 ~eeaL~Gm~vGek~~v~Ippe~AYGe~~ 84 (231)
T 3prb_A 57 LDEAILEMDVGEEREVVLPPEKAFGKRD 84 (231)
T ss_dssp HHHHHHTCCTTCEEEEEECGGGTTCCCC
T ss_pred HHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 4789999999999999999999999877
No 228
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.08 E-value=0.0011 Score=49.88 Aligned_cols=46 Identities=9% Similarity=-0.047 Sum_probs=40.4
Q ss_pred HHHHHHHHHH----------HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh
Q psy18096 68 GILASQELLD----------SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNL 113 (131)
Q Consensus 68 y~~Ai~~~~~----------~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~ 113 (131)
|.+|+.++.+ .-.|.....++|+|..|..+|+|++|+..+.+||.+
T Consensus 356 ~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 356 WEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 7777777777 335888899999999999999999999999999985
No 229
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.04 E-value=0.0025 Score=45.45 Aligned_cols=54 Identities=20% Similarity=0.069 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHh-h---hh-hHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHH
Q psy18096 68 GILASQELLDSL-I---KE-RINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQ 122 (131)
Q Consensus 68 y~~Ai~~~~~~~-~---~~-~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~ 122 (131)
+.+|+..|++-+ . |. ...+.+++|.|+.++|+.++|...+++++..+|+ ..++.
T Consensus 187 ~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~ 245 (282)
T 4f3v_A 187 FTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAA 245 (282)
T ss_dssp HHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHH
T ss_pred HHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHH
Confidence 999999999822 1 33 6679999999999999999999999999999998 66653
No 230
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.03 E-value=0.0025 Score=48.21 Aligned_cols=59 Identities=15% Similarity=0.051 Sum_probs=51.8
Q ss_pred HHHHHHHH--H-hhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCH-HHHHHHHHhh
Q psy18096 70 LASQELLD--S-LIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNI-KALQRKAKCL 128 (131)
Q Consensus 70 ~Ai~~~~~--~-~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~-ka~~rrg~a~ 128 (131)
+|+..|++ . +.|....++.+++..+.++|++++|+..++++|+++|++. .+|...|..+
T Consensus 304 ~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 366 (530)
T 2ooe_A 304 EAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFA 366 (530)
T ss_dssp HHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHH
Confidence 68888888 3 5688999999999999999999999999999999999985 6888877654
No 231
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=97.02 E-value=0.00036 Score=47.25 Aligned_cols=29 Identities=24% Similarity=0.420 Sum_probs=26.6
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGE 29 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~ 29 (131)
+|.+|..|++||+..|+|+|..|||.++.
T Consensus 45 ~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~ 73 (196)
T 2kfw_A 45 LETALEGHEVGDKFDVAVGANDAYGQYDE 73 (196)
T ss_dssp HHHHHSSSCTTCEEEEECSTTTTSSCCCT
T ss_pred HHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 47899999999999999999999998873
No 232
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=96.97 E-value=0.0034 Score=47.48 Aligned_cols=60 Identities=13% Similarity=0.021 Sum_probs=51.4
Q ss_pred HHHHHHHH--HhhhhhHHHHHHHHHHHHH-------hCChH-------HHHHHHHHHHh-hCCCCHHHHHHHHHhhh
Q psy18096 70 LASQELLD--SLIKERINCYNNLAQAQIK-------LGSLE-------PALMSLENVLN-LDPNNIKALQRKAKCLI 129 (131)
Q Consensus 70 ~Ai~~~~~--~~~~~~~~~~~N~a~~~~k-------l~~~~-------~a~~~~~~al~-~dp~~~ka~~rrg~a~~ 129 (131)
+|+..|++ ...|....+|.++|..+.+ +|+++ +|+..+++|++ ++|++...|+..|..+.
T Consensus 256 ~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~ 332 (530)
T 2ooe_A 256 RVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEE 332 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 45556665 5568899999999999997 79987 99999999997 89999999999988764
No 233
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=96.92 E-value=0.0021 Score=49.16 Aligned_cols=46 Identities=9% Similarity=-0.154 Sum_probs=40.1
Q ss_pred HHHHHHHHHH----------HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh
Q psy18096 68 GILASQELLD----------SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNL 113 (131)
Q Consensus 68 y~~Ai~~~~~----------~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~ 113 (131)
|.+|+.++.+ .-.|.....++|+|..|..+|+|++|+..+.+||.+
T Consensus 367 ~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 367 YEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 7777777766 345888899999999999999999999999999975
No 234
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=96.82 E-value=0.0039 Score=46.68 Aligned_cols=58 Identities=21% Similarity=0.078 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHH-H--HHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQA-Q--IKLGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~-~--~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
+.+|+.+|.+-. +..+.+++|+|.+ + ...+++++|+..+.++++. +++.|++..|..|
T Consensus 233 ~~~A~~~~~~aa-~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y 293 (452)
T 3e4b_A 233 EKTAQALLEKIA-PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLY 293 (452)
T ss_dssp HHHHHHHHHHHG-GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHH
Confidence 445555444433 4444444444444 2 2344444444444444422 2444444444443
No 235
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.81 E-value=0.0027 Score=47.68 Aligned_cols=46 Identities=13% Similarity=-0.051 Sum_probs=40.2
Q ss_pred HHHHHHHHHH----------HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh
Q psy18096 68 GILASQELLD----------SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNL 113 (131)
Q Consensus 68 y~~Ai~~~~~----------~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~ 113 (131)
|.+|+.++.+ .-.|.....++|+|..|..+|+|++|+..+.+|+.+
T Consensus 345 ~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 345 LEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 7777777776 446888999999999999999999999999999975
No 236
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.80 E-value=0.006 Score=38.20 Aligned_cols=56 Identities=14% Similarity=-0.057 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHH----hCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIK----LGSLEPALMSLENVLNLDPNNIKALQRKA 125 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~k----l~~~~~a~~~~~~al~~dp~~~ka~~rrg 125 (131)
+.+|+.+|++-.....+.+..|++.+|.. .+++++|+..+.+|.+.. +..|.++.+
T Consensus 77 ~~~A~~~~~~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~~~A~~~l~ 136 (138)
T 1klx_A 77 LRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG--SEDACGILN 136 (138)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHC-
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC--CHHHHHHHh
Confidence 78899999985555788999999999999 999999999999999884 566666544
No 237
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=96.77 E-value=0.0027 Score=47.54 Aligned_cols=59 Identities=12% Similarity=-0.022 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHH----hCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIK----LGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~k----l~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
+.+|+.+|.+-.....+.+++|+|.+|.. .+++++|+..+.++++.+ +..++++.|.+|
T Consensus 347 ~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y 409 (490)
T 2xm6_A 347 HKKAVEWFRKAAAKGEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIY 409 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHH
Confidence 55555555553333445555555555555 555555555555555432 455555555544
No 238
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=96.75 E-value=0.0075 Score=45.13 Aligned_cols=60 Identities=15% Similarity=0.050 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhC---ChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIKLG---SLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~kl~---~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
+.+|+.+|.+-.......++.|++.+|...| ++++|+..+.++++. +++.+++..|.++.
T Consensus 312 ~~~A~~~~~~a~~~~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~ 374 (490)
T 2xm6_A 312 REQAISWYTKSAEQGDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALL 374 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 8888888888555566778888999988866 788899999988876 57888888888765
No 239
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=96.66 E-value=0.01 Score=42.58 Aligned_cols=62 Identities=18% Similarity=0.071 Sum_probs=51.8
Q ss_pred HHHHHHHHHH--Hhhhh--hHHHHHHHHHHHHHh-----CChHHHHHHHHHHHhhCCCC-HHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLIKE--RINCYNNLAQAQIKL-----GSLEPALMSLENVLNLDPNN-IKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~--~~~~~~N~a~~~~kl-----~~~~~a~~~~~~al~~dp~~-~ka~~rrg~a~~ 129 (131)
-.+|...+++ +++|. ...+|.-++..|.++ |+.++|..++++||+++|+. ..+++..|..+.
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~ 250 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALC 250 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHH
Confidence 4555666666 78888 567999999999996 99999999999999999975 888888887654
No 240
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=96.64 E-value=0.014 Score=41.70 Aligned_cols=62 Identities=16% Similarity=0.042 Sum_probs=47.0
Q ss_pred HHHHHHHHHH--Hhh--------hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCC-----CHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SLI--------KERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPN-----NIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~~--------~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~-----~~ka~~rrg~a~~ 129 (131)
|.+|+..+.+ ++. +....++.|+|.++..+|++++|+..+.+++.+.+. ...+++..|.++.
T Consensus 109 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~ 185 (373)
T 1hz4_A 109 LQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSL 185 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHH
Confidence 6777777766 211 456778899999999999999999999999998775 2456666666553
No 241
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=96.49 E-value=0.0031 Score=47.51 Aligned_cols=44 Identities=20% Similarity=0.255 Sum_probs=38.6
Q ss_pred cchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccC
Q psy18096 2 DYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLP 51 (131)
Q Consensus 2 d~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~ 51 (131)
+.+|..|++||+..|.+++..+||..+. ++.++.|.++++++..
T Consensus 199 ee~L~G~k~Ge~~~v~v~~~~~yg~~~l------ag~~~~F~V~v~~v~~ 242 (432)
T 1w26_A 199 EDGIKGHKAGEEFTIDVTFPEEYHAENL------KGKAAKFAINLKKVEE 242 (432)
T ss_dssp HHHSSSCCSSCEEEEEEECCTTCSCTTT------SSCEEEEEEECCEECC
T ss_pred HHHhCCCCCCCEEEEEECCchhhCCCCC------CCceEEEEEEEEEEec
Confidence 5789999999999999999999998663 5678999999998864
No 242
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=96.32 E-value=0.014 Score=43.53 Aligned_cols=57 Identities=12% Similarity=-0.024 Sum_probs=26.3
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHh----CChHHHHHHHHHHHhhCCCCHHHHHHHHHh
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKL----GSLEPALMSLENVLNLDPNNIKALQRKAKC 127 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl----~~~~~a~~~~~~al~~dp~~~ka~~rrg~a 127 (131)
+.+|+..|.+ +..+.....++|++.+|... +++++|+..+.++. |+++.++++.|.+
T Consensus 195 ~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~ 257 (452)
T 3e4b_A 195 QAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQL 257 (452)
T ss_dssp HHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHH
Confidence 4444444444 33333344444444444433 44445555554444 4444444444444
No 243
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=96.29 E-value=0.014 Score=41.71 Aligned_cols=62 Identities=13% Similarity=0.049 Sum_probs=46.5
Q ss_pred HHHHHHHHHH--Hh------hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhC--------CCCHHHHHHHHHhhh
Q psy18096 68 GILASQELLD--SL------IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLD--------PNNIKALQRKAKCLI 129 (131)
Q Consensus 68 y~~Ai~~~~~--~~------~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~d--------p~~~ka~~rrg~a~~ 129 (131)
|.+|+..+.+ .+ ......++.|+|.++..+|+|++|+..+.+++.+. |....++...|.++.
T Consensus 69 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 146 (373)
T 1hz4_A 69 LTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLW 146 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHH
Confidence 7777777766 11 12335668899999999999999999999999875 344567777777654
No 244
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.12 E-value=0.02 Score=41.58 Aligned_cols=53 Identities=15% Similarity=0.018 Sum_probs=43.6
Q ss_pred HHHHHHHHHH-------------------HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHH
Q psy18096 68 GILASQELLD-------------------SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKA 120 (131)
Q Consensus 68 y~~Ai~~~~~-------------------~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka 120 (131)
|.+|++.|.. ...+....++.+++..|.++|+|++|+..+.+++.+.+...++
T Consensus 20 y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~ 91 (434)
T 4b4t_Q 20 YNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKS 91 (434)
T ss_dssp HHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHH
T ss_pred HHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccch
Confidence 9999999987 1124456789999999999999999999999999887665444
No 245
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.03 E-value=0.012 Score=42.54 Aligned_cols=57 Identities=9% Similarity=-0.106 Sum_probs=44.6
Q ss_pred HHHHHHHHHH--Hhhhh--hHHHHHHHHHHHHHhCChHHHHHHHHHHHhh----------CCCCHHHHHHHHHh
Q psy18096 68 GILASQELLD--SLIKE--RINCYNNLAQAQIKLGSLEPALMSLENVLNL----------DPNNIKALQRKAKC 127 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~--~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~----------dp~~~ka~~rrg~a 127 (131)
|++|+.+|++ +..|. ...++.| |++++|+|++|....+.++++ ||+|+.++.....+
T Consensus 194 ~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l 264 (310)
T 3mv2_B 194 ATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITL 264 (310)
T ss_dssp TTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHH
Confidence 7888888887 33333 3456667 999999999999999988887 68999999777443
No 246
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.00 E-value=0.013 Score=38.03 Aligned_cols=51 Identities=10% Similarity=-0.053 Sum_probs=45.5
Q ss_pred hhhhHHHHHHHHHHHHHhC---ChHHHHHHHHHHHhhC-C-CCHHHHHHHHHhhhc
Q psy18096 80 IKERINCYNNLAQAQIKLG---SLEPALMSLENVLNLD-P-NNIKALQRKAKCLIL 130 (131)
Q Consensus 80 ~~~~~~~~~N~a~~~~kl~---~~~~a~~~~~~al~~d-p-~~~ka~~rrg~a~~~ 130 (131)
.+....+.+|.|.|+.+.+ +..++|..+++++..+ | ++.+++|..|.++..
T Consensus 28 ~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k 83 (152)
T 1pc2_A 28 GSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR 83 (152)
T ss_dssp TCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH
Confidence 4678889999999999988 7779999999999999 7 679999999998864
No 247
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.87 E-value=0.026 Score=40.91 Aligned_cols=46 Identities=13% Similarity=0.159 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHHHhCChHHHHHHHHHHHhh------CCCCHHHHHHHHHhh
Q psy18096 83 RINCYNNLAQAQIKLGSLEPALMSLENVLNL------DPNNIKALQRKAKCL 128 (131)
Q Consensus 83 ~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~------dp~~~ka~~rrg~a~ 128 (131)
...++.|+|.+|..+|+|.+|+..+.+++.. .+..+.++...|+++
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVY 185 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 4455666666666666666666666665543 122344455555444
No 248
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.73 E-value=0.029 Score=48.22 Aligned_cols=44 Identities=16% Similarity=0.196 Sum_probs=36.4
Q ss_pred hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 81 KERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 81 ~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
.....+|.++|.++.++|+|++|+..+.++ ++..+|++.|.++.
T Consensus 1102 vn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~ 1145 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAAN 1145 (1630)
T ss_pred cCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHH
Confidence 345778899999999999999999999775 78888888887764
No 249
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=95.42 E-value=0.05 Score=32.16 Aligned_cols=48 Identities=8% Similarity=0.007 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHHhCChHHHHHHHHHHHhhC-------CCCHHHHHHHHHhhhc
Q psy18096 83 RINCYNNLAQAQIKLGSLEPALMSLENVLNLD-------PNNIKALQRKAKCLIL 130 (131)
Q Consensus 83 ~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~d-------p~~~ka~~rrg~a~~~ 130 (131)
.+.-.+.+|..+++.++|..|+..+.+|++.. +.....+...|.++..
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~ 58 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ 58 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH
Confidence 34556789999999999999999999999963 3567778888887753
No 250
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=95.27 E-value=0.099 Score=39.58 Aligned_cols=42 Identities=19% Similarity=0.169 Sum_probs=38.1
Q ss_pred HHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 89 NLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 89 N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
.+..+|.+.|+|++|+..++++|.+|+.+.-.+...|.++..
T Consensus 212 ~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~k 253 (449)
T 1b89_A 212 ELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 253 (449)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHh
Confidence 466789999999999999999999999999999999988764
No 251
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.03 E-value=0.069 Score=46.02 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCL 128 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~ 128 (131)
|.+|+.+|++ +..|..++.|+.++|+|++|++.+.+| ++.++|...+.|+
T Consensus 1211 YeeA~~~Y~k------A~ny~rLA~tLvkLge~q~AIEaarKA-----~n~~aWkev~~ac 1260 (1630)
T 1xi4_A 1211 YDAAKLLYNN------VSNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFAC 1260 (1630)
T ss_pred HHHHHHHHHh------hhHHHHHHHHHHHhCCHHHHHHHHHHh-----CCHHHHHHHHHHH
Confidence 9999999983 568999999999999999999999998 5667776554443
No 252
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=94.82 E-value=0.028 Score=42.53 Aligned_cols=49 Identities=14% Similarity=0.157 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHh
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKC 127 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a 127 (131)
|++|+.+|+ .+..|.++|.|+.++|+|++|++.+.++ ++++.|-..+.+
T Consensus 138 yeeA~~~Y~------~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~a 186 (449)
T 1b89_A 138 YDAAKLLYN------NVSNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFA 186 (449)
T ss_dssp TTTHHHHHH------HTTCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHH
T ss_pred HHHHHHHHH------HhhhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHH
Confidence 899999887 3357899999999999999999999999 466666554433
No 253
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=94.77 E-value=0.055 Score=38.98 Aligned_cols=48 Identities=6% Similarity=-0.116 Sum_probs=33.2
Q ss_pred HHHHHHHHHHH--hhh--hhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCC
Q psy18096 68 GILASQELLDS--LIK--ERINCYNNLAQAQIKLGSLEPALMSLENVLNLDP 115 (131)
Q Consensus 68 y~~Ai~~~~~~--~~~--~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp 115 (131)
+.+|++.+.+- ..+ ....++.-++.+++++|+.+.|.+.+.+..+.+|
T Consensus 116 ~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 116 LDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp HHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 77777777662 222 5667777777777777777777777777777777
No 254
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=94.52 E-value=0.13 Score=37.94 Aligned_cols=49 Identities=18% Similarity=0.035 Sum_probs=27.0
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN 117 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~ 117 (131)
+.+|+..+++ .+++ ....|.-+|.++.-.|++++|++.+++|+.++|..
T Consensus 293 ~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 293 TDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp HHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred HHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 4555555555 3433 23444555666666666666666666666666644
No 255
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=93.95 E-value=0.038 Score=41.06 Aligned_cols=45 Identities=16% Similarity=0.183 Sum_probs=35.7
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLP 51 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~ 51 (131)
+|.+|..|++||+..|+++..-.||..+. +|.++.|+++++++..
T Consensus 201 fee~L~Gmk~Ge~~~v~v~fp~dy~~~~l------aGk~~~F~V~v~~i~~ 245 (392)
T 1t11_A 201 FEDGIVGKTKGMEFVIDVTFPEDYHAENL------KGKAAKFAIKVNKVEA 245 (392)
T ss_dssp SGGGTTTCCSSCCCCEEEECCTTCSCTTT------SSCEEEECCCEEEEEE
T ss_pred HHHHhCCCCCCCEEEEEEeCccccccCCC------CCCeEEEEEEEEEEEc
Confidence 47899999999999999974445665442 5789999999998864
No 256
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=93.32 E-value=0.31 Score=36.03 Aligned_cols=48 Identities=10% Similarity=0.066 Sum_probs=38.2
Q ss_pred hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 81 KERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 81 ~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
+..+.+|.-+|..++..|++++|+..+++|+.++|+ .-+|.-.|+++.
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~ 321 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYE 321 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHH
Confidence 444555556777788889999999999999999974 678778887764
No 257
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=92.81 E-value=0.68 Score=37.29 Aligned_cols=45 Identities=20% Similarity=0.188 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhhc
Q psy18096 86 CYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLIL 130 (131)
Q Consensus 86 ~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~~ 130 (131)
++.-.|.-.+..|+|+-|+..+.+|...-|...+.|++.+++|+.
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~ 383 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIK 383 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHH
Confidence 455556667788999999999999999999999999999999975
No 258
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=91.20 E-value=0.57 Score=30.69 Aligned_cols=25 Identities=20% Similarity=0.165 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHhCChHHHHHHHHH
Q psy18096 85 NCYNNLAQAQIKLGSLEPALMSLEN 109 (131)
Q Consensus 85 ~~~~N~a~~~~kl~~~~~a~~~~~~ 109 (131)
.+.+..|.||++++++.+||...+.
T Consensus 123 Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 123 EVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 5778899999999999999997654
No 259
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=90.30 E-value=1.3 Score=32.50 Aligned_cols=51 Identities=16% Similarity=0.203 Sum_probs=43.6
Q ss_pred hhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 79 LIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 79 ~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
+......+...++.+++.+|++.+|+..+..++..||-+..+|...-.||.
T Consensus 166 l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~ 216 (388)
T 2ff4_A 166 LVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYY 216 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 345666777889999999999999999999999999999988877766664
No 260
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=89.55 E-value=0.59 Score=37.66 Aligned_cols=42 Identities=26% Similarity=0.261 Sum_probs=37.1
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHH
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLEN 109 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~ 109 (131)
|+-|+.+..+ .+.|.....|..+|.||.++|+|+.|+-..+-
T Consensus 353 ~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNS 396 (754)
T 4gns_B 353 YELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINS 396 (754)
T ss_dssp HHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhc
Confidence 8888888888 77899999999999999999999999976554
No 261
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=87.86 E-value=1.5 Score=28.64 Aligned_cols=47 Identities=6% Similarity=-0.164 Sum_probs=37.2
Q ss_pred HHHHHHHHHH-----Hh------hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhC
Q psy18096 68 GILASQELLD-----SL------IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLD 114 (131)
Q Consensus 68 y~~Ai~~~~~-----~~------~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~d 114 (131)
|+.|+-..+. +. ......++..+|.++...++|..|...+.+||++.
T Consensus 36 Y~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~ 93 (167)
T 3ffl_A 36 HSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQK 93 (167)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 8888777766 11 12345688899999999999999999999998753
No 262
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=87.44 E-value=1.4 Score=25.87 Aligned_cols=29 Identities=14% Similarity=0.085 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHHHHhCChHHHHHHHHHHH
Q psy18096 83 RINCYNNLAQAQIKLGSLEPALMSLENVL 111 (131)
Q Consensus 83 ~~~~~~N~a~~~~kl~~~~~a~~~~~~al 111 (131)
.+..+..+|-.+++-|.|++||.+-.+|.
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 45567789999999999999998776655
No 263
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=85.21 E-value=0.85 Score=32.69 Aligned_cols=49 Identities=14% Similarity=0.019 Sum_probs=42.4
Q ss_pred HHHHHHHHHH--Hhhhhh-HHHHHHHHHHHHHh-CChHHHHHHHHHHHhhCCC
Q psy18096 68 GILASQELLD--SLIKER-INCYNNLAQAQIKL-GSLEPALMSLENVLNLDPN 116 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~-~~~~~N~a~~~~kl-~~~~~a~~~~~~al~~dp~ 116 (131)
.++|-.+|++ ++.|.. +..+...|..+... ++++++.+.+++||..+|.
T Consensus 220 ~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 220 MEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 5677888887 788865 88899999999884 9999999999999998876
No 264
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=81.59 E-value=8.5 Score=26.46 Aligned_cols=45 Identities=16% Similarity=0.010 Sum_probs=36.6
Q ss_pred HHHHHHHHHH---HhhhhhHHHHHHHHHHHHH-hCChHHHHHHHHHHHh
Q psy18096 68 GILASQELLD---SLIKERINCYNNLAQAQIK-LGSLEPALMSLENVLN 112 (131)
Q Consensus 68 y~~Ai~~~~~---~~~~~~~~~~~N~a~~~~k-l~~~~~a~~~~~~al~ 112 (131)
|++|..+-.. ...|....+-+|.+..|.. +++.++|+..+.+|+.
T Consensus 153 Y~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 153 YKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999988766 4456777788899988886 7999999998887774
No 265
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=81.17 E-value=8.4 Score=27.17 Aligned_cols=57 Identities=16% Similarity=0.089 Sum_probs=46.7
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHH--HHHH
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKA--LQRK 124 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka--~~rr 124 (131)
...||..+.. .-.|.++....-+..-+.-.|+|++|...++.+.+++|+.... .||.
T Consensus 13 L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~ 73 (273)
T 1zbp_A 13 LQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRH 73 (273)
T ss_dssp HHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHH
Confidence 5677777766 5568888888888888888999999999999999999998765 4543
No 266
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=79.75 E-value=9.5 Score=28.75 Aligned_cols=52 Identities=12% Similarity=0.019 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKA 125 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg 125 (131)
|++|+.. .|....+|.+.+..+...|+.++|...+.+|+.. |.+..-|+..+
T Consensus 202 ye~al~~-----~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~ 253 (493)
T 2uy1_A 202 HNYILDS-----FYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYG 253 (493)
T ss_dssp HHHHHHH-----TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHH
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHH
Confidence 5555543 3677899999999999999999999999999999 99876666444
No 267
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=79.30 E-value=11 Score=26.37 Aligned_cols=45 Identities=16% Similarity=0.008 Sum_probs=35.9
Q ss_pred HHHHHHHHHHH---hhhhhHHHHHHHHHHHHH-hCChHHHHHHHHHHHh
Q psy18096 68 GILASQELLDS---LIKERINCYNNLAQAQIK-LGSLEPALMSLENVLN 112 (131)
Q Consensus 68 y~~Ai~~~~~~---~~~~~~~~~~N~a~~~~k-l~~~~~a~~~~~~al~ 112 (131)
|++|..+-..+ ..|....+-+|.+..|.. +++.++|+..+.+|+.
T Consensus 179 Y~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 179 YKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999877664 457777788899888876 6999999998777764
No 268
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=79.13 E-value=11 Score=26.09 Aligned_cols=45 Identities=11% Similarity=-0.082 Sum_probs=35.8
Q ss_pred HHHHHHHHHHH---hhhhhHHHHHHHHHHHHH-hCChHHHHHHHHHHHh
Q psy18096 68 GILASQELLDS---LIKERINCYNNLAQAQIK-LGSLEPALMSLENVLN 112 (131)
Q Consensus 68 y~~Ai~~~~~~---~~~~~~~~~~N~a~~~~k-l~~~~~a~~~~~~al~ 112 (131)
|++|..+...+ ..|....+-+|.+..|.. +++.++|+..+.+|+.
T Consensus 154 Y~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 154 YSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99998887764 456777788899888776 7999999998777764
No 269
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=77.47 E-value=6 Score=22.55 Aligned_cols=27 Identities=22% Similarity=0.206 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 86 CYNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 86 ~~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
-+..+|.-.-+.|+|.+|+..+..+|+
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 345567777778888888877776665
No 270
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=77.32 E-value=13 Score=26.03 Aligned_cols=45 Identities=13% Similarity=-0.033 Sum_probs=36.1
Q ss_pred HHHHHHHHHHH---hhhhhHHHHHHHHHHHHH-hCChHHHHHHHHHHHh
Q psy18096 68 GILASQELLDS---LIKERINCYNNLAQAQIK-LGSLEPALMSLENVLN 112 (131)
Q Consensus 68 y~~Ai~~~~~~---~~~~~~~~~~N~a~~~~k-l~~~~~a~~~~~~al~ 112 (131)
|++|..+-..+ ..|....+-+|.+..|.. +++.++|+..+.+|+.
T Consensus 158 Y~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 158 YKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 99999887764 456777788899988886 6999999998877763
No 271
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=75.56 E-value=7.8 Score=22.18 Aligned_cols=29 Identities=10% Similarity=-0.025 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 84 INCYNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 84 ~~~~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
+.-+..+|.-.-+.|+|++|+..+..+++
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34455677777778888888877777765
No 272
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=75.46 E-value=13 Score=25.98 Aligned_cols=44 Identities=11% Similarity=-0.020 Sum_probs=36.4
Q ss_pred HHHHHHHHHH---HhhhhhHHHHHHHHHHHHH-hCChHHHHHHHHHHHh
Q psy18096 68 GILASQELLD---SLIKERINCYNNLAQAQIK-LGSLEPALMSLENVLN 112 (131)
Q Consensus 68 y~~Ai~~~~~---~~~~~~~~~~~N~a~~~~k-l~~~~~a~~~~~~al~ 112 (131)
|++|..+. . ...|....+-+|.+..|.. +++.++|+..+.+|+.
T Consensus 179 Y~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 179 YKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999888 6 4457777888899988886 7999999998888774
No 273
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=75.24 E-value=12 Score=25.74 Aligned_cols=45 Identities=13% Similarity=-0.040 Sum_probs=35.5
Q ss_pred HHHHHHHHHHH---hhhhhHHHHHHHHHHHHH-hCChHHHHHHHHHHHh
Q psy18096 68 GILASQELLDS---LIKERINCYNNLAQAQIK-LGSLEPALMSLENVLN 112 (131)
Q Consensus 68 y~~Ai~~~~~~---~~~~~~~~~~N~a~~~~k-l~~~~~a~~~~~~al~ 112 (131)
|++|..+...+ ..|....+-+|.+..|.. +++.++|+..+.+|+.
T Consensus 156 Y~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 156 YQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999887764 457777788899888774 6999999998777763
No 274
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=74.25 E-value=8.1 Score=21.91 Aligned_cols=28 Identities=25% Similarity=0.275 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 85 NCYNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 85 ~~~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
.-+..+|.-.-+.|+|.+|+..+..+|+
T Consensus 12 i~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 12 RKYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3455677777778888888877776665
No 275
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=73.34 E-value=12 Score=24.98 Aligned_cols=42 Identities=19% Similarity=0.035 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
|.+|+-++.+ -...+...--++||.++++|..|+.+.+..|+
T Consensus 49 Y~R~Lf~L~~---lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~ 90 (242)
T 3kae_A 49 YTRALFHLHK---LNTCTSKYYESLCYKKKKDYKKAIKSLESILE 90 (242)
T ss_dssp HHHHHHHHHT---CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HhHHHHHHHh---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6666655542 22344555679999999999999999999993
No 276
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=71.78 E-value=17 Score=28.88 Aligned_cols=55 Identities=15% Similarity=-0.026 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCChHHHH-HHHHHHHhhCCCCHHHHHHHHHh
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIKLGSLEPAL-MSLENVLNLDPNNIKALQRKAKC 127 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~a~-~~~~~al~~dp~~~ka~~rrg~a 127 (131)
|++|+.. .|....+|...|.-....|+.++|+ ..+++|+...|.+..-|+..+..
T Consensus 332 Ye~aL~~-----~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ 387 (679)
T 4e6h_A 332 YMQAAQH-----VCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQ 387 (679)
T ss_dssp HHHHHHH-----TTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHH-----cCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 6666654 4778899999999999999999997 99999999999988777666543
No 277
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=70.69 E-value=11 Score=23.38 Aligned_cols=51 Identities=10% Similarity=-0.087 Sum_probs=42.9
Q ss_pred hhhhHHHHHHHHHHHHHhCChHH---HHHHHHHHHhhC-C-CCHHHHHHHHHhhhc
Q psy18096 80 IKERINCYNNLAQAQIKLGSLEP---ALMSLENVLNLD-P-NNIKALQRKAKCLIL 130 (131)
Q Consensus 80 ~~~~~~~~~N~a~~~~kl~~~~~---a~~~~~~al~~d-p-~~~ka~~rrg~a~~~ 130 (131)
.+.....-.|.|.|+.+.++..+ +|..+...+.-+ | .+...+|..|.++..
T Consensus 31 ~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yk 86 (126)
T 1nzn_A 31 GSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR 86 (126)
T ss_dssp SCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Confidence 35778889999999999887777 999999999987 5 678899998888754
No 278
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=69.52 E-value=15 Score=28.96 Aligned_cols=44 Identities=18% Similarity=0.154 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 86 CYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 86 ~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
....+|...+..|+|..|.+-++.++..||+|..|..-++.+|-
T Consensus 451 ~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~ 494 (658)
T 2cfu_A 451 RLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALE 494 (658)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 35567888888999999999999999999999999888887763
No 279
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=69.25 E-value=12 Score=21.71 Aligned_cols=26 Identities=12% Similarity=0.014 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 87 YNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 87 ~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
+.++|.-.-+.++|.+|+..+..+++
T Consensus 18 lv~~Ave~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 18 VLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 44566666667777777776666554
No 280
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=69.18 E-value=21 Score=23.70 Aligned_cols=41 Identities=7% Similarity=-0.017 Sum_probs=34.6
Q ss_pred hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHH
Q psy18096 81 KERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKAL 121 (131)
Q Consensus 81 ~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~ 121 (131)
...+.+++-+|..++-.++|.+|-.++..|+..-|......
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~ 51 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKN 51 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHH
Confidence 45677888899999999999999999999999988765443
No 281
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=68.32 E-value=12 Score=22.83 Aligned_cols=25 Identities=24% Similarity=0.266 Sum_probs=14.0
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 88 NNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 88 ~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
.++|.-.-+.++|.+|+..+..+++
T Consensus 22 v~~Ave~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 22 ASKAAQEDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3445445555666666666555554
No 282
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=66.92 E-value=14 Score=20.77 Aligned_cols=26 Identities=19% Similarity=-0.008 Sum_probs=16.6
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 87 YNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 87 ~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
+.++|.-.-+.|+|++|+..+..+++
T Consensus 16 l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 16 LVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 44555555666777777776666655
No 283
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=65.70 E-value=32 Score=24.14 Aligned_cols=46 Identities=17% Similarity=-0.024 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHh--h---hhhHHHHHHHHHHHH-HhCChHHHHHHHHHHHhh
Q psy18096 68 GILASQELLDSL--I---KERINCYNNLAQAQI-KLGSLEPALMSLENVLNL 113 (131)
Q Consensus 68 y~~Ai~~~~~~~--~---~~~~~~~~N~a~~~~-kl~~~~~a~~~~~~al~~ 113 (131)
|++|.++...++ . |....+-+|.+..|. -+++.++|+..+.+|+.-
T Consensus 175 Yq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 175 YEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 999998887655 4 556667779888888 479999999998888754
No 284
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=63.97 E-value=28 Score=23.82 Aligned_cols=46 Identities=15% Similarity=0.034 Sum_probs=38.2
Q ss_pred HHHHHHHHHHH---HhhhhhHHHHHHHHHHHHH-hCChHHHHHHHHHHHh
Q psy18096 67 GGILASQELLD---SLIKERINCYNNLAQAQIK-LGSLEPALMSLENVLN 112 (131)
Q Consensus 67 ~y~~Ai~~~~~---~~~~~~~~~~~N~a~~~~k-l~~~~~a~~~~~~al~ 112 (131)
+|++|..+... ...|....+-+|.+..|.. +++.++|+....+|+.
T Consensus 147 aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 147 IHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp HHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 39999988876 4567778888999988885 6999999999999965
No 285
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=63.72 E-value=37 Score=26.87 Aligned_cols=47 Identities=9% Similarity=-0.067 Sum_probs=28.6
Q ss_pred HhhhhhHHHHHHHHHHHHHhCC---hHHHHHHHHHHHhhCC--CCHHHHHHH
Q psy18096 78 SLIKERINCYNNLAQAQIKLGS---LEPALMSLENVLNLDP--NNIKALQRK 124 (131)
Q Consensus 78 ~~~~~~~~~~~N~a~~~~kl~~---~~~a~~~~~~al~~dp--~~~ka~~rr 124 (131)
..-|....+|...+..-++.++ ++.+...|++++..-| .+++.|...
T Consensus 94 ~~fP~~~~lW~~Yi~~E~~~~~~~~~~~v~~lfeRal~~~~~~~sv~LW~~Y 145 (679)
T 4e6h_A 94 DRFPLMANIWCMRLSLEFDKMEELDAAVIEPVLARCLSKELGNNDLSLWLSY 145 (679)
T ss_dssp HHCTTCHHHHHHHHHHHHTC--CCCHHHHHHHHHHHTCSSSCCCCHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHhhCCcchHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 3346666667666666666666 7777777777777663 566655543
No 286
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=63.19 E-value=20 Score=27.36 Aligned_cols=32 Identities=16% Similarity=0.024 Sum_probs=20.2
Q ss_pred HhCChHHHHHHHHHHHhhCCCCHHHHHHHHHh
Q psy18096 96 KLGSLEPALMSLENVLNLDPNNIKALQRKAKC 127 (131)
Q Consensus 96 kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a 127 (131)
-...+..|...+.+|+.+.|++..+|...|..
T Consensus 164 Y~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavl 195 (497)
T 1ya0_A 164 YRNQTSQAESYYRHAAQLVPSNGQPYNQLAIL 195 (497)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCchHHHHHHH
Confidence 34456667777777777777666666655543
No 287
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=63.07 E-value=7.6 Score=29.97 Aligned_cols=51 Identities=12% Similarity=-0.049 Sum_probs=42.2
Q ss_pred HHHHHHHHHH----H---hhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCH
Q psy18096 68 GILASQELLD----S---LIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNI 118 (131)
Q Consensus 68 y~~Ai~~~~~----~---~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ 118 (131)
|.+|.++.++ + .....+.+++-.|..+.-.++|.+|..++..|+..-|.+.
T Consensus 247 y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 247 VDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp STTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred HHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 7888888877 1 2345578888999999999999999999999999887654
No 288
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=61.87 E-value=8.4 Score=28.83 Aligned_cols=36 Identities=25% Similarity=0.323 Sum_probs=29.0
Q ss_pred CcchhcccCCCcEEEEEEcCCCCCCCCCCCCCCCCCCceEEEEEeeccccC
Q psy18096 1 MDYVLPLMETGEECQIEITARFGYGDKGEPSKSIPPGAKLYYSLTLHSVLP 51 (131)
Q Consensus 1 ld~~l~~M~~gE~~~v~i~~~~ayG~~G~~~~~ip~~~~~~~~v~l~~~~~ 51 (131)
++.+|..|++||...|.+. | +|.+..|.++++.+..
T Consensus 192 fe~~liG~k~Ge~~~~~vt--F-------------aGk~a~F~VtV~~Ik~ 227 (433)
T 3gty_X 192 FVKDLVGKKKGDVVEIERE--Y-------------EGKKYTYKLEVEEVYK 227 (433)
T ss_dssp THHHHTTCCTTCEEEEEEE--E-------------TTEEEEEEEEEEEEEE
T ss_pred HHHHhCCCCCCceEEEEEe--e-------------CCCeEEEEEEEEEEEE
Confidence 3568999999999999983 2 3558899999998854
No 289
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=60.59 E-value=22 Score=26.52 Aligned_cols=32 Identities=9% Similarity=0.055 Sum_probs=27.8
Q ss_pred hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 81 KERINCYNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 81 ~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
.....++.=+|.+|+-+++|++|+..|+++|.
T Consensus 187 ~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 187 MNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 34566777889999999999999999999995
No 290
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=58.43 E-value=24 Score=25.67 Aligned_cols=57 Identities=21% Similarity=0.162 Sum_probs=43.6
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHH-------hhCCCC-HHHHHHH
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVL-------NLDPNN-IKALQRK 124 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al-------~~dp~~-~ka~~rr 124 (131)
|.+|+..+.. ..+|..-.++.-+..++...|+..+|++.|.+.- .++|.- .++++++
T Consensus 187 ~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~ 253 (388)
T 2ff4_A 187 ASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNER 253 (388)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 7777777766 7788888999999999999999999999887653 345643 4555544
No 291
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=57.79 E-value=25 Score=26.18 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=27.7
Q ss_pred hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 81 KERINCYNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 81 ~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
.....++.=+|.+|+-+++|++|+..|+++|.
T Consensus 193 ~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 193 VNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 44566777789999999999999999999986
No 292
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=57.69 E-value=16 Score=20.58 Aligned_cols=26 Identities=27% Similarity=0.408 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 87 YNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 87 ~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
...+|.=|..+|+|+.|+..++-+++
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 45677888889999999999998886
No 293
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=55.09 E-value=30 Score=25.87 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=28.3
Q ss_pred hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh
Q psy18096 81 KERINCYNNLAQAQIKLGSLEPALMSLENVLNL 113 (131)
Q Consensus 81 ~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~ 113 (131)
.....++.=+|.+|+-+++|++|+..|+++|..
T Consensus 199 ~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 199 INYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 345667778899999999999999999999964
No 294
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=54.88 E-value=36 Score=24.12 Aligned_cols=47 Identities=15% Similarity=0.012 Sum_probs=34.4
Q ss_pred hhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh--CCCCHHHHHHHHHhh
Q psy18096 82 ERINCYNNLAQAQIKLGSLEPALMSLENVLNL--DPNNIKALQRKAKCL 128 (131)
Q Consensus 82 ~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~--dp~~~ka~~rrg~a~ 128 (131)
-.++++.|+|....+....+++......+.++ ..++.+++||.-.|+
T Consensus 210 A~ATl~~NlAv~~~~~~~~~~~~~ll~~l~~il~~~~d~EalyR~LvAL 258 (304)
T 3ebb_A 210 ALATLALNYSVCFHKDHNIEGKAQCLSLISTILEVVQDLEATFRLLVAL 258 (304)
T ss_dssp HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 45678999999999988777666654433322 356899999987775
No 295
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.72 E-value=6.6 Score=24.02 Aligned_cols=44 Identities=7% Similarity=-0.130 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCC
Q psy18096 64 LDFGGILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDP 115 (131)
Q Consensus 64 ~~~~y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp 115 (131)
+...|++|-.++++ .+++. +.-..-+.-|.+.|...++.|.+..
T Consensus 15 ik~~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~ 60 (116)
T 2dl1_A 15 IREAYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISS 60 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccc
Confidence 44447777776665 22220 1111122334555556666666654
No 296
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=54.34 E-value=31 Score=26.02 Aligned_cols=33 Identities=15% Similarity=0.041 Sum_probs=28.4
Q ss_pred hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh
Q psy18096 81 KERINCYNNLAQAQIKLGSLEPALMSLENVLNL 113 (131)
Q Consensus 81 ~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~ 113 (131)
.....++.=+|.+|+-+++|++|+..|+++|..
T Consensus 200 ~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 200 IDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 345667778999999999999999999999964
No 297
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=50.73 E-value=8.1 Score=22.45 Aligned_cols=6 Identities=17% Similarity=-0.208 Sum_probs=2.4
Q ss_pred HHHHHH
Q psy18096 68 GILASQ 73 (131)
Q Consensus 68 y~~Ai~ 73 (131)
|++|-.
T Consensus 13 h~~AF~ 18 (89)
T 3eab_A 13 HKQAFE 18 (89)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 298
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=46.12 E-value=42 Score=25.42 Aligned_cols=44 Identities=16% Similarity=0.022 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHH
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIKLGSLEPALMSLENVL 111 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al 111 (131)
|.+||..-........+--|.-+|-++.+-++|.+|++.+.++-
T Consensus 287 f~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa 330 (489)
T 4gq4_A 287 YHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTA 330 (489)
T ss_dssp HHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhh
Confidence 88888877664444445557888999999999999999877654
No 299
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=45.66 E-value=66 Score=23.73 Aligned_cols=47 Identities=13% Similarity=-0.097 Sum_probs=39.5
Q ss_pred HHHHHHHHHH---Hh-----hhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhC
Q psy18096 68 GILASQELLD---SL-----IKERINCYNNLAQAQIKLGSLEPALMSLENVLNLD 114 (131)
Q Consensus 68 y~~Ai~~~~~---~~-----~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~d 114 (131)
|.+|++++++ ++ ......++..-...|..++++.++...+++|....
T Consensus 115 y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~ 169 (394)
T 3txn_A 115 YTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTA 169 (394)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhh
Confidence 9999999888 32 35677889999999999999999999998887643
No 300
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=44.08 E-value=1e+02 Score=23.41 Aligned_cols=54 Identities=15% Similarity=0.014 Sum_probs=46.2
Q ss_pred HHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHH
Q psy18096 68 GILASQELLD--SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKAL 121 (131)
Q Consensus 68 y~~Ai~~~~~--~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~ 121 (131)
+..|..+|.+ .+.|.....|+-+|....-.++.-+|+=+|.++|.......-|.
T Consensus 168 ~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~ 223 (497)
T 1ya0_A 168 TSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAAS 223 (497)
T ss_dssp HHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHH
Confidence 7788888888 78899999999999999999999999999999998765444443
No 301
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=41.95 E-value=34 Score=25.54 Aligned_cols=33 Identities=15% Similarity=-0.008 Sum_probs=28.5
Q ss_pred hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh
Q psy18096 81 KERINCYNNLAQAQIKLGSLEPALMSLENVLNL 113 (131)
Q Consensus 81 ~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~ 113 (131)
.....++.=+|.+|+-+++|++|+..++++|..
T Consensus 188 ~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 188 PNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred cCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 345677888999999999999999999999963
No 302
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=41.30 E-value=78 Score=21.15 Aligned_cols=48 Identities=10% Similarity=-0.072 Sum_probs=36.4
Q ss_pred HHHHHHHHHH------H-------------hhhhhHHHH-HHHHHHHHHhCChHHHHHHHHHHHhhCC
Q psy18096 68 GILASQELLD------S-------------LIKERINCY-NNLAQAQIKLGSLEPALMSLENVLNLDP 115 (131)
Q Consensus 68 y~~Ai~~~~~------~-------------~~~~~~~~~-~N~a~~~~kl~~~~~a~~~~~~al~~dp 115 (131)
|++|+..+++ + ++|..-..+ +-+|......|.-+|||..+......+|
T Consensus 78 YkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 78 YKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSF 145 (242)
T ss_dssp HHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCcc
Confidence 9999999988 1 134444444 4567777788999999999998887775
No 303
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=40.64 E-value=40 Score=25.18 Aligned_cols=32 Identities=16% Similarity=0.188 Sum_probs=27.7
Q ss_pred hhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh
Q psy18096 82 ERINCYNNLAQAQIKLGSLEPALMSLENVLNL 113 (131)
Q Consensus 82 ~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~ 113 (131)
....++.=+|.+|+-+++|++|+..|+++|..
T Consensus 195 tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 195 NKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 35567778899999999999999999999964
No 304
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=39.96 E-value=48 Score=18.33 Aligned_cols=28 Identities=18% Similarity=0.279 Sum_probs=23.8
Q ss_pred HHHHHHHHhCChHHHHHHHHHHHhhCCC
Q psy18096 89 NLAQAQIKLGSLEPALMSLENVLNLDPN 116 (131)
Q Consensus 89 N~a~~~~kl~~~~~a~~~~~~al~~dp~ 116 (131)
.++-.++..|++++|+.++-+||..-|+
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 4677778889999999999999998765
No 305
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=39.61 E-value=19 Score=20.62 Aligned_cols=25 Identities=24% Similarity=0.287 Sum_probs=18.6
Q ss_pred ChHHHHHHHHHHHhhCCCCHHHHHH
Q psy18096 99 SLEPALMSLENVLNLDPNNIKALQR 123 (131)
Q Consensus 99 ~~~~a~~~~~~al~~dp~~~ka~~r 123 (131)
...+++....++|+.+|+|+..+-.
T Consensus 25 ~~~~~v~~Ai~~L~~~PsnPa~LAe 49 (85)
T 2ca5_A 25 TLQGELTLALDKLAKNPSNPQLLAE 49 (85)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 4567777888888889998866543
No 306
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=39.17 E-value=76 Score=20.44 Aligned_cols=47 Identities=13% Similarity=0.089 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHH
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIK 119 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~k 119 (131)
|+.|++. . ...+.+|.-.|.--+++|+...|..-..+||.+.|....
T Consensus 83 y~~a~~~-h----KkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~ 129 (161)
T 4h7y_A 83 FQMARAN-C----KKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLE 129 (161)
T ss_dssp HHHHHHH-C----TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHH
T ss_pred HHHHHHH-h----HHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHH
Confidence 7777764 2 223889999999999999999999999999999987543
No 307
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=38.18 E-value=67 Score=20.70 Aligned_cols=60 Identities=8% Similarity=-0.236 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHH---HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHH
Q psy18096 64 LDFGGILASQELLD---SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRK 124 (131)
Q Consensus 64 ~~~~y~~Ai~~~~~---~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rr 124 (131)
+...|++||.-... ..-.-++-++.+-|.- ..+++.++|.+.++.++.+..+-+|.|.-.
T Consensus 38 lrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~ 100 (161)
T 4h7y_A 38 LIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISF 100 (161)
T ss_dssp HHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHH
T ss_pred HHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 33348888875543 2234567778888855 677999999999999998865555555433
No 308
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=35.38 E-value=54 Score=24.79 Aligned_cols=32 Identities=13% Similarity=0.109 Sum_probs=27.5
Q ss_pred hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 81 KERINCYNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 81 ~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
.....++.=+|.+|+-+++|++|+..|+++|.
T Consensus 179 ~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 179 ATKGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556777889999999999999999999996
No 309
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=35.25 E-value=1.1e+02 Score=20.98 Aligned_cols=28 Identities=29% Similarity=0.246 Sum_probs=23.3
Q ss_pred HHHHHhCChHHHHHHHHHHHhhCCCCHH
Q psy18096 92 QAQIKLGSLEPALMSLENVLNLDPNNIK 119 (131)
Q Consensus 92 ~~~~kl~~~~~a~~~~~~al~~dp~~~k 119 (131)
++.++.|.|++|.+...+.++-+|.+.+
T Consensus 122 ~VCiek~~f~kA~eiLkr~~~~~~s~~k 149 (235)
T 3bu8_A 122 IICIKNKEFEKASKILKKHMSKDPTTQK 149 (235)
T ss_dssp HHHHHTTCHHHHHHHHHHHSTTCGGGHH
T ss_pred HHHHHhcchHHHHHHHHHHhcCCCCchH
Confidence 4567899999999999999998776654
No 310
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=33.31 E-value=34 Score=16.14 Aligned_cols=17 Identities=18% Similarity=0.280 Sum_probs=12.0
Q ss_pred CChHHHHHHHHHHHhhC
Q psy18096 98 GSLEPALMSLENVLNLD 114 (131)
Q Consensus 98 ~~~~~a~~~~~~al~~d 114 (131)
+-|++|+..+..+|+.+
T Consensus 16 KayDKAVaSfk~alk~~ 32 (37)
T 3s6n_M 16 KAYDKAVASFKHALKNG 32 (37)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 34778888888777654
No 311
>3l22_A SUSD superfamily protein; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.05A {Bacteroides fragilis}
Probab=33.21 E-value=34 Score=25.33 Aligned_cols=30 Identities=10% Similarity=0.027 Sum_probs=25.8
Q ss_pred hhHHHHHHHHHHHHHhCChHHHHHHHHHHH
Q psy18096 82 ERINCYNNLAQAQIKLGSLEPALMSLENVL 111 (131)
Q Consensus 82 ~~~~~~~N~a~~~~kl~~~~~a~~~~~~al 111 (131)
....++.=+|.+|+-+++|++|+..|+++|
T Consensus 199 tk~aA~allarvyL~~~~~~~A~~~a~~vi 228 (441)
T 3l22_A 199 TQAAANMLKMRVYMAMNEWDKAITAGELVT 228 (441)
T ss_dssp BHHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 344567778999999999999999999998
No 312
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=32.19 E-value=52 Score=24.23 Aligned_cols=46 Identities=15% Similarity=0.002 Sum_probs=37.9
Q ss_pred HHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh
Q psy18096 68 GILASQELLD-----SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNL 113 (131)
Q Consensus 68 y~~Ai~~~~~-----~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~ 113 (131)
|.+|++.|.+ ........++.+...+++..++|..+.....++-.+
T Consensus 147 ~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 147 KDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp CTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 7888888887 123457788999999999999999999999998764
No 313
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=31.75 E-value=1.6e+02 Score=22.05 Aligned_cols=30 Identities=13% Similarity=0.083 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 83 RINCYNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 83 ~~~~~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
+...|+.+-.+|.+.|++++|+..+++..+
T Consensus 104 d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~ 133 (501)
T 4g26_A 104 NEATFTNGARLAVAKDDPEMAFDMVKQMKA 133 (501)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 344455555566666666666665555444
No 314
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=36.83 E-value=11 Score=30.02 Aligned_cols=44 Identities=20% Similarity=0.143 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 86 CYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 86 ~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
....+|...+..|+|..|.+-++.++..||+|..|-.-++.+|-
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~ 506 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAME 506 (668)
Confidence 34567777788899999999999999999999988877777663
No 315
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=29.95 E-value=1.1e+02 Score=22.82 Aligned_cols=43 Identities=14% Similarity=-0.052 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHH
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIKLGSLEPALMSLENV 110 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~a 110 (131)
|.+||..-..-.....+-=|.-+|.++.+-+++.+|++...+|
T Consensus 280 ~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~A 322 (472)
T 3re2_A 280 FKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDA 322 (472)
T ss_dssp HHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHH
Confidence 8888876666222223333677899999999999999866544
No 316
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=29.22 E-value=81 Score=23.42 Aligned_cols=30 Identities=23% Similarity=0.337 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 83 RINCYNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 83 ~~~~~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
.+.+|+++|-|+.++|+..+|+.+.+++.+
T Consensus 337 ~aEv~Li~AEA~~~~g~~~~A~~~lN~vR~ 366 (461)
T 3kez_A 337 LSEAYLNAAEAAVQTGDNAKAVKYLNSIVQ 366 (461)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCchHHHHHHHHHHH
Confidence 467899999999999999999999888765
No 317
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=29.13 E-value=86 Score=24.28 Aligned_cols=28 Identities=14% Similarity=0.152 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHHHhCChHHHHHHHHHH
Q psy18096 83 RINCYNNLAQAQIKLGSLEPALMSLENV 110 (131)
Q Consensus 83 ~~~~~~N~a~~~~kl~~~~~a~~~~~~a 110 (131)
....|.++|..+++.++++.|++++.++
T Consensus 680 ~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 680 AEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 3578899999999999999999998875
No 318
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=29.00 E-value=2.4e+02 Score=23.20 Aligned_cols=60 Identities=10% Similarity=-0.049 Sum_probs=43.9
Q ss_pred HHHHHHHHHH-------------------------HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh-CCCCHH--
Q psy18096 68 GILASQELLD-------------------------SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNL-DPNNIK-- 119 (131)
Q Consensus 68 y~~Ai~~~~~-------------------------~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~-dp~~~k-- 119 (131)
+++|..++.+ +.......+|+..+..+-+.+-++.+++-+..||+. ++++..
T Consensus 856 ~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~ 935 (950)
T 4gq2_M 856 AVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLS 935 (950)
T ss_dssp HHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHH
T ss_pred HHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccch
Confidence 8999999987 111234458889999999999999999999999974 445543
Q ss_pred --HHHHHHHh
Q psy18096 120 --ALQRKAKC 127 (131)
Q Consensus 120 --a~~rrg~a 127 (131)
.|.|.-++
T Consensus 936 ~~l~~r~f~~ 945 (950)
T 4gq2_M 936 IAITHETLKT 945 (950)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 44444443
No 319
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=28.97 E-value=64 Score=25.30 Aligned_cols=39 Identities=10% Similarity=-0.046 Sum_probs=28.6
Q ss_pred HHHHHHhCChHHHHHHHHHHHhhCCCCHHHHHHHHHhhh
Q psy18096 91 AQAQIKLGSLEPALMSLENVLNLDPNNIKALQRKAKCLI 129 (131)
Q Consensus 91 a~~~~kl~~~~~a~~~~~~al~~dp~~~ka~~rrg~a~~ 129 (131)
+..-++.++|..|...+...-.-..+..++.|++|+++.
T Consensus 292 ~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~ 330 (618)
T 1qsa_A 292 VRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLL 330 (618)
T ss_dssp HHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHH
Confidence 334457799999999887755543466888999998864
No 320
>3l32_A Phosphoprotein; antiparallel alpha-helices, viral protein, dimerisation domain; 1.50A {Rabies virus}
Probab=28.74 E-value=10 Score=18.85 Aligned_cols=10 Identities=30% Similarity=0.640 Sum_probs=6.5
Q ss_pred hhcccCCCcE
Q psy18096 4 VLPLMETGEE 13 (131)
Q Consensus 4 ~l~~M~~gE~ 13 (131)
+++.|+.||.
T Consensus 16 iVrkmKtGe~ 25 (45)
T 3l32_A 16 IVRQMRSGER 25 (45)
T ss_dssp HHHHHTTTCC
T ss_pred HHHHHHcccc
Confidence 4667777763
No 321
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=28.61 E-value=35 Score=19.86 Aligned_cols=24 Identities=25% Similarity=0.350 Sum_probs=15.9
Q ss_pred ChHHHHHHHHHHHhhCCCCHHHHH
Q psy18096 99 SLEPALMSLENVLNLDPNNIKALQ 122 (131)
Q Consensus 99 ~~~~a~~~~~~al~~dp~~~ka~~ 122 (131)
...+++....++|+.+|+|+-.|-
T Consensus 31 ~~~~~l~~Al~~L~~~psNPa~LA 54 (92)
T 2g0u_A 31 DLNKQLQDAQANLTKNPSDPTALA 54 (92)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHH
Confidence 445566666677777888876553
No 322
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=28.11 E-value=66 Score=18.75 Aligned_cols=27 Identities=19% Similarity=0.281 Sum_probs=19.7
Q ss_pred HHHHHHHhCChHHHHHHHHHHHhhCCC
Q psy18096 90 LAQAQIKLGSLEPALMSLENVLNLDPN 116 (131)
Q Consensus 90 ~a~~~~kl~~~~~a~~~~~~al~~dp~ 116 (131)
++-.++..|+++.|+.++-+||..-|+
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 556666778888888888888876653
No 323
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=27.86 E-value=54 Score=24.57 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 82 ERINCYNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 82 ~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
....++.=+|.+|+-+++|++|+..|++++.
T Consensus 178 tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 178 TQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred cHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3455777789999999999999999999984
No 324
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=27.67 E-value=87 Score=23.83 Aligned_cols=31 Identities=3% Similarity=0.092 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 82 ERINCYNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 82 ~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
....++.=+|.+|+-+++|++|...|+++|.
T Consensus 196 tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 196 CKQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3456777788999999999999999999996
No 325
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=27.35 E-value=37 Score=18.87 Aligned_cols=19 Identities=21% Similarity=0.146 Sum_probs=16.0
Q ss_pred chhcccCCCcEEEEEEcCC
Q psy18096 3 YVLPLMETGEECQIEITAR 21 (131)
Q Consensus 3 ~~l~~M~~gE~~~v~i~~~ 21 (131)
.+|..|..||...|.++-.
T Consensus 29 kal~~l~~G~~l~V~~dd~ 47 (82)
T 3lvj_C 29 KTVRNMQPGETLLIIADDP 47 (82)
T ss_dssp HHHHTSCTTCEEEEEECCT
T ss_pred HHHHhCCCCCEEEEEECCc
Confidence 4788999999999998754
No 326
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=27.13 E-value=1.3e+02 Score=22.93 Aligned_cols=43 Identities=16% Similarity=0.032 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHH
Q psy18096 68 GILASQELLDSLIKERINCYNNLAQAQIKLGSLEPALMSLENV 110 (131)
Q Consensus 68 y~~Ai~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~a 110 (131)
|.+||..-..-.....+-=|.-+|-++.+-+++.+|++..-++
T Consensus 302 ~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~A 344 (550)
T 3u84_A 302 YHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADT 344 (550)
T ss_dssp HHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHH
Confidence 8888877666333333333777899999999999999865544
No 327
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=26.58 E-value=38 Score=22.82 Aligned_cols=52 Identities=12% Similarity=-0.067 Sum_probs=30.1
Q ss_pred HHHHHHHHHH---Hhh---hhhHH-HHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCHH
Q psy18096 68 GILASQELLD---SLI---KERIN-CYNNLAQAQIKLGSLEPALMSLENVLNLDPNNIK 119 (131)
Q Consensus 68 y~~Ai~~~~~---~~~---~~~~~-~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~~k 119 (131)
.+.|+..++. +.+ ...-. +-----++.++.|.|++|.+.+++..+-+++|.+
T Consensus 94 LESAl~v~~~I~~e~~~lheei~~Llk~qAV~VCiekg~Fk~A~eiLkr~f~~~~~~~~ 152 (211)
T 3bqo_A 94 LESALMIWGSIEKEHDKLHEEIQNLIKIQAIAVCMENGNFKEAEEVFERIFGDPNSHMP 152 (211)
T ss_dssp HHHHHHHHTTSCSCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC-----CCT
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcCCCCchH
Confidence 5677777776 111 11111 1223345678999999999999999988876654
No 328
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=26.50 E-value=34 Score=28.20 Aligned_cols=24 Identities=13% Similarity=-0.063 Sum_probs=21.4
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHH
Q psy18096 88 NNLAQAQIKLGSLEPALMSLENVL 111 (131)
Q Consensus 88 ~N~a~~~~kl~~~~~a~~~~~~al 111 (131)
+=+|.||+.+|++++|..++.+|=
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHh
Confidence 449999999999999999998765
No 329
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=26.50 E-value=44 Score=19.42 Aligned_cols=18 Identities=17% Similarity=0.333 Sum_probs=15.7
Q ss_pred chhcccCCCcEEEEEEcC
Q psy18096 3 YVLPLMETGEECQIEITA 20 (131)
Q Consensus 3 ~~l~~M~~gE~~~v~i~~ 20 (131)
.+|..|..||...|.++-
T Consensus 46 kaL~~l~~Ge~L~Vl~dd 63 (97)
T 1je3_A 46 EAMPQLKKGEILEVVSDC 63 (97)
T ss_dssp HHTTTCCSSCEEEEEEBC
T ss_pred HHHHcCCCCCEEEEEECC
Confidence 478999999999999875
No 330
>2fb7_A SM-like protein, LSM-14_N (RAP55); DR.13312, BC055387, AAH55387, stronGly BENT five-stranded antiparallel beta- sheet, structural genomics, PSI; NMR {Danio rerio} SCOP: b.38.1.5 PDB: 2vxf_A
Probab=25.90 E-value=43 Score=19.60 Aligned_cols=29 Identities=17% Similarity=0.459 Sum_probs=21.2
Q ss_pred cEEEEEEcCCCCCCCCCCCCC-CCCCCceE
Q psy18096 12 EECQIEITARFGYGDKGEPSK-SIPPGAKL 40 (131)
Q Consensus 12 E~~~v~i~~~~ayG~~G~~~~-~ip~~~~~ 40 (131)
|.+.+.+..-..||..|++.. .|||..++
T Consensus 42 ~~sTiaL~nVRsfGTEgR~~~~~ipp~~~v 71 (95)
T 2fb7_A 42 ENSTVALAKVRSFGTEDRPTDRPIAPRDET 71 (95)
T ss_dssp TTTEEEEESCCCCSCCSSSCSSCCCSCCCC
T ss_pred ccCEEEEEeeeEecccCCCCCCccCCCCcc
Confidence 556777777889999998653 47876654
No 331
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=24.86 E-value=42 Score=19.49 Aligned_cols=19 Identities=26% Similarity=0.214 Sum_probs=16.1
Q ss_pred chhcccCCCcEEEEEEcCC
Q psy18096 3 YVLPLMETGEECQIEITAR 21 (131)
Q Consensus 3 ~~l~~M~~gE~~~v~i~~~ 21 (131)
.+|..|..||..+|.++-.
T Consensus 45 kaL~~l~~Ge~L~Vl~dd~ 63 (98)
T 1jdq_A 45 RALQNMKPGEILEVWIDYP 63 (98)
T ss_dssp HHHHTCCTTCEEEEEESSC
T ss_pred HHHHhCCCCCEEEEEECCc
Confidence 4789999999999999753
No 332
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=24.65 E-value=61 Score=20.29 Aligned_cols=21 Identities=14% Similarity=0.172 Sum_probs=15.5
Q ss_pred hcccCCCcEEEEEEcCCCCCCCC
Q psy18096 5 LPLMETGEECQIEITARFGYGDK 27 (131)
Q Consensus 5 l~~M~~gE~~~v~i~~~~ayG~~ 27 (131)
++.|++|+.+.|. |.-.|++.
T Consensus 35 lr~Mk~GD~~~fY--~~~~~hs~ 55 (147)
T 2p5d_A 35 INKVKVGDKLIIY--EIQRSGKD 55 (147)
T ss_dssp HTTCCTTCEEEEE--ECCBCSTT
T ss_pred HHhCCCCCEEEEE--EecccCCC
Confidence 6789999999999 44444443
No 333
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=24.51 E-value=1.1e+02 Score=23.77 Aligned_cols=18 Identities=22% Similarity=0.038 Sum_probs=13.9
Q ss_pred HHHHhCChHHHHHHHHHH
Q psy18096 93 AQIKLGSLEPALMSLENV 110 (131)
Q Consensus 93 ~~~kl~~~~~a~~~~~~a 110 (131)
+++++|++++|++.|.+.
T Consensus 745 ~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 745 AYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHHTCHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHc
Confidence 777888888888877653
No 334
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=24.16 E-value=1.1e+02 Score=22.84 Aligned_cols=31 Identities=16% Similarity=0.225 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHHHhCChHHHHHHHHHHHhh
Q psy18096 83 RINCYNNLAQAQIKLGSLEPALMSLENVLNL 113 (131)
Q Consensus 83 ~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~ 113 (131)
.+.+|++.|-|..++|+..+|+...+++.+.
T Consensus 360 yAEvlL~~AEA~~~~g~~~~A~~~lN~VR~R 390 (481)
T 3jq1_A 360 YADVLLMLAEAYMNKGALDTSIGYINQIRRR 390 (481)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhCChHHHHHHHHHHHHh
Confidence 4779999999999999999999988887653
No 335
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.30 E-value=1.2e+02 Score=22.58 Aligned_cols=31 Identities=16% Similarity=-0.072 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHHHhCChHHHHHHHHHHHhh
Q psy18096 83 RINCYNNLAQAQIKLGSLEPALMSLENVLNL 113 (131)
Q Consensus 83 ~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~ 113 (131)
.+.+|+.+|-|..++|+..+|+...+++...
T Consensus 363 ~AEv~Li~AEA~~~~g~~~~A~~~lN~vR~R 393 (478)
T 3hdx_A 363 LEDITLLRAEALCALNRSTEAVSYLNMIRTN 393 (478)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999998887654
No 336
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=23.01 E-value=1e+02 Score=22.87 Aligned_cols=30 Identities=30% Similarity=0.337 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHHHhCCh-HHHHHHHHHHHh
Q psy18096 83 RINCYNNLAQAQIKLGSL-EPALMSLENVLN 112 (131)
Q Consensus 83 ~~~~~~N~a~~~~kl~~~-~~a~~~~~~al~ 112 (131)
.+.+|+++|-|+.++|+. .+|+.+.+++.+
T Consensus 356 ~aEvyLi~AEA~~~~g~~~~~A~~~lN~vR~ 386 (477)
T 3mcx_A 356 LSEVYLNAAEAGLKKGTDIEEAQGYLNDIIS 386 (477)
T ss_dssp HHHHHHHHHHHHHHHTSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 567899999999999998 999999998887
No 337
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=22.61 E-value=94 Score=23.01 Aligned_cols=30 Identities=27% Similarity=0.272 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHHHhC--ChHHHHHHHHHHHh
Q psy18096 83 RINCYNNLAQAQIKLG--SLEPALMSLENVLN 112 (131)
Q Consensus 83 ~~~~~~N~a~~~~kl~--~~~~a~~~~~~al~ 112 (131)
.+.+|+++|-|+.++| +..+|+.+.+++..
T Consensus 334 ~aEv~Li~AEA~~~~gg~~~~~A~~~lN~vR~ 365 (454)
T 3myv_A 334 LSEVYLIAAEAGCKLGGDAAVQGLGYLNEIVK 365 (454)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 5678999999999999 88899998887765
No 338
>3gae_A Protein DOA1; UFD3, CDC48, armadillo repeat, nucleus, phosphoprotein, UBL conjugation pathway, WD repeat, nuclear protein; 1.60A {Saccharomyces cerevisiae}
Probab=22.32 E-value=1e+02 Score=21.07 Aligned_cols=47 Identities=15% Similarity=-0.070 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh----C---CCCHHHHHHHHHhh
Q psy18096 82 ERINCYNNLAQAQIKLGSLEPALMSLENVLNL----D---PNNIKALQRKAKCL 128 (131)
Q Consensus 82 ~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~----d---p~~~ka~~rrg~a~ 128 (131)
-.++++.|.|....+...-.+......+++.. . .++..|.||--.|+
T Consensus 159 A~ATl~~N~av~~~~~~~~~e~~~~l~~~i~~~~~~~e~~~~d~Ea~yR~LvAl 212 (253)
T 3gae_A 159 AVSTLIFNYSALVTKGNSDLELLPIVADAINTKYGPLEEYQECEEAAYRLTVAY 212 (253)
T ss_dssp HHHHHHHHHHHHHHTSCSCTTHHHHHHHHHHTTTTTSHHHHHSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHH
Confidence 35678999999988743323333444444442 1 24889999987775
No 339
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=22.21 E-value=2.1e+02 Score=21.52 Aligned_cols=37 Identities=8% Similarity=0.052 Sum_probs=32.5
Q ss_pred hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhh-CCCC
Q psy18096 81 KERINCYNNLAQAQIKLGSLEPALMSLENVLNL-DPNN 117 (131)
Q Consensus 81 ~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~-dp~~ 117 (131)
...+.+++-+|..++-.++|.+|-.+...|+.. -|.+
T Consensus 217 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 217 DQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred cceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 356788889999999999999999999999998 6654
No 340
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=21.83 E-value=1e+02 Score=19.71 Aligned_cols=40 Identities=15% Similarity=0.136 Sum_probs=31.7
Q ss_pred HhhhhhHHHHHHHHHHHHHhCChHHHHHHHHHHHhhCCCC
Q psy18096 78 SLIKERINCYNNLAQAQIKLGSLEPALMSLENVLNLDPNN 117 (131)
Q Consensus 78 ~~~~~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~~dp~~ 117 (131)
..++....+...+..++..+.+....+..+..-+..||..
T Consensus 84 ~~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~le~DP~r 123 (175)
T 4abx_A 84 KYDETVMQLQNELRAALESVQAIAGELRDVAEGSAADPEA 123 (175)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHH
T ss_pred HhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 4456666777788888888888888888888888888864
No 341
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=21.26 E-value=1.6e+02 Score=20.60 Aligned_cols=29 Identities=21% Similarity=0.299 Sum_probs=25.3
Q ss_pred HHHHhCChHHHHHHHHHHHhhCCCCHHHH
Q psy18096 93 AQIKLGSLEPALMSLENVLNLDPNNIKAL 121 (131)
Q Consensus 93 ~~~kl~~~~~a~~~~~~al~~dp~~~ka~ 121 (131)
..++-+..++|+..+...++-+|.|.+.-
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R 34 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLR 34 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHH
Confidence 45678999999999999999999998653
No 342
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=20.85 E-value=1.2e+02 Score=22.64 Aligned_cols=30 Identities=23% Similarity=0.352 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHHHHhC-ChHHHHHHHHHHHh
Q psy18096 83 RINCYNNLAQAQIKLG-SLEPALMSLENVLN 112 (131)
Q Consensus 83 ~~~~~~N~a~~~~kl~-~~~~a~~~~~~al~ 112 (131)
.+..|+++|-|+.++| +..+|+.+.+++..
T Consensus 320 ~aEvyLi~AEA~~~~gg~~~~A~~~lN~vR~ 350 (460)
T 3snx_A 320 SAEMYLIEAEAKVRDGVALDQAVAPLNTLRT 350 (460)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 5678999999999999 99999999888776
No 343
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=20.63 E-value=1.6e+02 Score=18.81 Aligned_cols=31 Identities=16% Similarity=0.080 Sum_probs=26.2
Q ss_pred hhHHHHHHHHHHHHHhCChHHHHHHHHHHHh
Q psy18096 82 ERINCYNNLAQAQIKLGSLEPALMSLENVLN 112 (131)
Q Consensus 82 ~~~~~~~N~a~~~~kl~~~~~a~~~~~~al~ 112 (131)
.++.++.-+|.+|-|+|+-.+|-+-..+|.+
T Consensus 123 ~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 123 VSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 3478888999999999999999887777765
Done!