BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy181
(111 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3SZI6|RPN2_BOVIN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 2 OS=Bos taurus GN=RPN2 PE=2 SV=1
Length = 631
Score = 94.7 bits (234), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/98 (53%), Positives = 66/98 (67%)
Query: 9 HMFREAERRPPVFVSNLFTALVLLPILILFILWGKLGINISNFPFRLSAIAFHLCLGGIF 68
H+FRE E+RPP VSN FTAL+L P+L+LF LW ++G N+SNF F S I FHL +
Sbjct: 528 HLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIVFHLGHAAML 587
Query: 69 VLFGFFWLQLNMFETLKYLFFLSIITFYTGNSLLSHIA 106
L +W QLNMF+TLKYL L +TF GN +L+ A
Sbjct: 588 GLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRMLAQQA 625
>sp|Q9DBG6|RPN2_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 2 OS=Mus musculus GN=Rpn2 PE=2 SV=1
Length = 631
Score = 94.4 bits (233), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/101 (50%), Positives = 67/101 (66%)
Query: 9 HMFREAERRPPVFVSNLFTALVLLPILILFILWGKLGINISNFPFRLSAIAFHLCLGGIF 68
H+FRE E+RPP VSN FTAL+L P+L+LF LW ++G N+SNF F S + FHL +
Sbjct: 528 HLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTVIFHLGHAAML 587
Query: 69 VLFGFFWLQLNMFETLKYLFFLSIITFYTGNSLLSHIASSK 109
L +W QLNMF+TLKYL L +TF GN +L+ A +
Sbjct: 588 GLMYIYWTQLNMFQTLKYLAVLGTVTFLAGNRMLAQHAVKR 628
>sp|Q5RBM1|RPN2_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 2 OS=Pongo abelii GN=RPN2 PE=2 SV=1
Length = 631
Score = 94.4 bits (233), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/101 (51%), Positives = 67/101 (66%)
Query: 9 HMFREAERRPPVFVSNLFTALVLLPILILFILWGKLGINISNFPFRLSAIAFHLCLGGIF 68
H+FRE E+RPP VSN FTAL+L P+L+LF LW ++G N+SNF F S I FHL +
Sbjct: 528 HLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFTPSTIIFHLGHAAML 587
Query: 69 VLFGFFWLQLNMFETLKYLFFLSIITFYTGNSLLSHIASSK 109
L +W QLNMF+TLKYL L +TF GN +L+ A +
Sbjct: 588 GLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRMLAQQAVKR 628
>sp|P04844|RPN2_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 2 OS=Homo sapiens GN=RPN2 PE=1 SV=3
Length = 631
Score = 94.4 bits (233), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/101 (51%), Positives = 67/101 (66%)
Query: 9 HMFREAERRPPVFVSNLFTALVLLPILILFILWGKLGINISNFPFRLSAIAFHLCLGGIF 68
H+FRE E+RPP VSN FTAL+L P+L+LF LW ++G N+SNF F S I FHL +
Sbjct: 528 HLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAAML 587
Query: 69 VLFGFFWLQLNMFETLKYLFFLSIITFYTGNSLLSHIASSK 109
L +W QLNMF+TLKYL L +TF GN +L+ A +
Sbjct: 588 GLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRMLAQQAVKR 628
>sp|P25235|RPN2_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 2 OS=Rattus norvegicus GN=Rpn2 PE=2 SV=2
Length = 631
Score = 94.4 bits (233), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/101 (50%), Positives = 67/101 (66%)
Query: 9 HMFREAERRPPVFVSNLFTALVLLPILILFILWGKLGINISNFPFRLSAIAFHLCLGGIF 68
H+FRE E+RPP VSN FTAL+L P+L+LF LW ++G N+SNF F S + FHL +
Sbjct: 528 HLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTVIFHLGHAAML 587
Query: 69 VLFGFFWLQLNMFETLKYLFFLSIITFYTGNSLLSHIASSK 109
L +W QLNMF+TLKYL L +TF GN +L+ A +
Sbjct: 588 GLMYVYWTQLNMFQTLKYLAVLGTVTFLAGNRMLAQQAVKR 628
>sp|Q5N7W3|RPN2_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 2 OS=Oryza sativa subsp. japonica GN=RPN2 PE=2
SV=1
Length = 698
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 2 GKAKKKIHMFREAERRPPVFVSNLFTALVLLPILILFILWGKLGINISNFPFRLSAIAF- 60
G K+ H+FR E+RPP +S FT L LLPI+ I +LG+N+ NFP + AF
Sbjct: 581 GPKKEISHIFRSPEKRPPKELSFAFTGLTLLPIVGFLIGLMRLGVNLKNFPSLPAPAAFA 640
Query: 61 ---HLCLGGIFVLFGFFWLQLNMFETLKYLFFLSIITFYTGNSLLSHIASS 108
H +G + +L+ FW++L++F TLKYL FL + + G+ LS+++S+
Sbjct: 641 SLFHAGIGAVLLLYVLFWIKLDLFTTLKYLSFLGVFLVFVGHRALSYLSST 691
>sp|Q9GL01|RPN2_PIG Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 2 OS=Sus scrofa GN=RPN2 PE=2 SV=1
Length = 629
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 53/104 (50%), Positives = 70/104 (67%), Gaps = 4/104 (3%)
Query: 4 AKKKI-HMFREAERRPPVFVSNLFTALVLLPILILFILWGKLGINISNFPFRLSAIAFHL 62
AK++I H+FR+ E+RPP VSN FT L+L P+L+LF LW ++G ISNF F L+ I FH
Sbjct: 523 AKQEIQHLFRDPEKRPPTVVSNTFTGLILSPLLLLFALWIRIGAKISNFTFGLT-IIFH- 580
Query: 63 CLGGIFVLFGFFWLQLNMFETLKYLFFLSIITFYTGNSLLSHIA 106
LG + +W QLNMF+TLKYL L +TF GN +L+ A
Sbjct: 581 -LGHAMLAMYVYWTQLNMFQTLKYLAILGSVTFLAGNRMLAQQA 623
>sp|Q93Z16|RPN2_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 2 OS=Arabidopsis thaliana GN=RPN2 PE=2 SV=1
Length = 691
Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Query: 9 HMFREAERRPPVFVSNLFTALVLLPILILFILWGKLGINISNFPFR----LSAIAFHLCL 64
H+FR E+ P +S +F +++LP + I +LG+NI +FP +SA+ FH +
Sbjct: 581 HIFRIPEKLPAKQLSLVFLGVIVLPFIGFLIGLTRLGVNIKSFPSSTGSAISALLFHCGI 640
Query: 65 GGIFVLFGFFWLQLNMFETLKYLFFLSIITFYTGNSLLSHIASS 108
G + +L+ FWL+L++F TLK L L + + G+ LS +AS+
Sbjct: 641 GAVLLLYVLFWLKLDLFTTLKALSLLGVFLLFVGHRTLSQLASA 684
>sp|Q54HG9|RPN2_DICDI Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit swp1 OS=Dictyostelium discoideum GN=swp1 PE=3
SV=1
Length = 685
Score = 59.3 bits (142), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 9 HMFREAERRPPVFVSNLFTALVLLPILILFILWGKLGINISNFPFRLS---AIAFHLCLG 65
H FR AE+RPP +S+LFT LVL PI I I +G N+ FP + I F C+
Sbjct: 575 HNFRVAEKRPPQSISSLFTLLVLSPIAIFVIGLLFVGTNLGRFPTGMGFIYTIGFLGCIS 634
Query: 66 GIFVLFGFFWLQLNMFETLKYLFFLSIITFYTGN 99
+L +WL M TLK L L I + G+
Sbjct: 635 ATGLLIVNYWLHSTMDVTLKNLALLMIPLVFFGH 668
>sp|P73241|ATCS_SYNY3 Cation-transporting ATPase PacS OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=pacS PE=1 SV=1
Length = 745
Score = 36.6 bits (83), Expect = 0.053, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 5 KKKIHMFREAERRPPVFVSNLFTALVLLPILILFILWGKLGINISNFP 52
K+++ ++ E R PVF + L T LV+ +L L LG+NI +FP
Sbjct: 71 KQQVLSSQQTEDRKPVFSAKLVTGLVISAVLFFGSLPMMLGVNIPHFP 118
>sp|Q93YS4|AB22G_ARATH ABC transporter G family member 22 OS=Arabidopsis thaliana
GN=ABCG22 PE=1 SV=1
Length = 751
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 31 LLPILILFILWGKLGINISNFPFRLSAIAFHLCL 64
+LP L L +++ G+ IS +PF LS + LC+
Sbjct: 607 ILPSLFLLVVYFMTGLRISPYPFFLSMLTVFLCI 640
>sp|Q02795|OSTD_YEAST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit SWP1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SWP1 PE=1 SV=1
Length = 286
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 9 HMFREAERRPPVFVSNLFTALVLLPILILFILW-GKLGINISNFPFRLSAI---AFHLCL 64
H+F +R ++ +F ++ + IL L + W +N P ++A+ F +
Sbjct: 182 HIFHAEPKRVAKPIAVIFVLIIFITILSLIVTWLNSCAAAFNNIPTGVTAVYFLGFIATI 241
Query: 65 GGIFVLFGFFWLQLNMFETL 84
G V+F ++L ++FETL
Sbjct: 242 VGFEVIFARYYLGTSIFETL 261
>sp|P25338|YGB0_YEAST Uncharacterized endoplasmic reticulum membrane protein YGL010W
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=YGL010W PE=1 SV=2
Length = 174
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 15 ERRPPVFVSNLFTALVLLPILILFILWGKLG 45
E+R P + NL +LVL P I+F KLG
Sbjct: 119 EKRRPALIDNLVQSLVLAPYFIMFEFLFKLG 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.336 0.149 0.467
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,613,758
Number of Sequences: 539616
Number of extensions: 1230189
Number of successful extensions: 5340
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 5319
Number of HSP's gapped (non-prelim): 35
length of query: 111
length of database: 191,569,459
effective HSP length: 79
effective length of query: 32
effective length of database: 148,939,795
effective search space: 4766073440
effective search space used: 4766073440
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 55 (25.8 bits)