RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy181
         (111 letters)



>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase,
           catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 453

 Score = 23.8 bits (51), Expect = 7.3
 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 4/17 (23%)

Query: 74  FWLQLNMFETLKYLFFL 90
           F+L     ETLKYLF L
Sbjct: 415 FFLG----ETLKYLFLL 427


>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic
           domain {Trichoderma reesei [TaxId: 51453]}
          Length = 488

 Score = 23.5 bits (50), Expect = 7.7
 Identities = 6/17 (35%), Positives = 8/17 (47%), Gaps = 4/17 (23%)

Query: 74  FWLQLNMFETLKYLFFL 90
           FW      E LKY + +
Sbjct: 446 FWFA----EALKYAYLI 458


>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic
           domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
           4932]}
          Length = 511

 Score = 23.5 bits (50), Expect = 7.9
 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 4/17 (23%)

Query: 74  FWLQLNMFETLKYLFFL 90
           FWL     ETLKYL+ L
Sbjct: 461 FWLA----ETLKYLYIL 473


>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase,
           catalytic domain {Fungus (Penicillium citrinum) [TaxId:
           5077]}
          Length = 475

 Score = 23.5 bits (50), Expect = 8.4
 Identities = 4/17 (23%), Positives = 6/17 (35%), Gaps = 4/17 (23%)

Query: 74  FWLQLNMFETLKYLFFL 90
           F       E +KY +  
Sbjct: 433 FLFA----EVMKYSYLA 445


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.336    0.149    0.467 

Gapped
Lambda     K      H
   0.267   0.0621    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 408,244
Number of extensions: 16560
Number of successful extensions: 71
Number of sequences better than 10.0: 1
Number of HSP's gapped: 71
Number of HSP's successfully gapped: 21
Length of query: 111
Length of database: 2,407,596
Length adjustment: 70
Effective length of query: 41
Effective length of database: 1,446,496
Effective search space: 59306336
Effective search space used: 59306336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 47 (22.1 bits)