BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18100
(76 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383858690|ref|XP_003704832.1| PREDICTED: splicing factor 45-like [Megachile rotundata]
Length = 382
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 34/40 (85%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTA 73
NMVGPGEVD DLEPEVKDECNTKYG+V RVIIHE+ A
Sbjct: 292 RNMVGPGEVDDDLEPEVKDECNTKYGDVARVIIHEVTEAA 331
>gi|332022266|gb|EGI62581.1| Splicing factor 45 [Acromyrmex echinatior]
Length = 383
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 34/36 (94%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD+DLEPEVKDECNTKYG+V RVIIHE+
Sbjct: 293 RNMVGPGEVDNDLEPEVKDECNTKYGDVARVIIHEV 328
>gi|312382254|gb|EFR27775.1| hypothetical protein AND_05136 [Anopheles darlingi]
Length = 178
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 13 PGEVDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
P S EP + E + NMVGPG+VD +LEPEVKDECNTKYG+VV V+IHE+P
Sbjct: 67 PQRTGSATEPSITEIMKSPSKVNMVGPGDVDDELEPEVKDECNTKYGDVVTVVIHEVP 124
>gi|322800820|gb|EFZ21695.1| hypothetical protein SINV_12429 [Solenopsis invicta]
Length = 242
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 33/36 (91%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD DLEPEVKDECNTKYG+V RVIIHE+
Sbjct: 152 RNMVGPGEVDDDLEPEVKDECNTKYGDVARVIIHEV 187
>gi|66516089|ref|XP_393194.2| PREDICTED: splicing factor 45-like [Apis mellifera]
gi|380028015|ref|XP_003697707.1| PREDICTED: splicing factor 45-like [Apis florea]
Length = 381
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
Query: 21 EPEVKE--ECNTKYG--ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTA 73
EP + E +C +K NMVGPGEVD DLEPEVKDECNTKYG+V RVIIHE+ A
Sbjct: 274 EPSITEIMKCPSKVVLLRNMVGPGEVDDDLEPEVKDECNTKYGDVARVIIHEVTEAA 330
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPGEVD DLEPEVK+ECNTKYG+
Sbjct: 288 VLLRNMVGPGEVDDDLEPEVKDECNTKYGD 317
>gi|242015516|ref|XP_002428399.1| Splicing factor, putative [Pediculus humanus corporis]
gi|212513011|gb|EEB15661.1| Splicing factor, putative [Pediculus humanus corporis]
Length = 402
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/36 (83%), Positives = 34/36 (94%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGPGEVD DLEPEVKDECNTKYGEV++V+I E+P
Sbjct: 313 NMVGPGEVDDDLEPEVKDECNTKYGEVIKVLIFEMP 348
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/30 (83%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPGEVD DLEPEVK+ECNTKYGE
Sbjct: 309 VLLRNMVGPGEVDDDLEPEVKDECNTKYGE 338
>gi|340719031|ref|XP_003397961.1| PREDICTED: splicing factor 45-like [Bombus terrestris]
Length = 382
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
Query: 21 EPEVKE--ECNTKYG--ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTA 73
EP + E +C +K NMVGPGEVD DLEPEVKDECNTKYG+V RVIIHE+ A
Sbjct: 275 EPSITEIMKCPSKVVLLRNMVGPGEVDDDLEPEVKDECNTKYGDVARVIIHEVTEAA 331
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPGEVD DLEPEVK+ECNTKYG+
Sbjct: 289 VLLRNMVGPGEVDDDLEPEVKDECNTKYGD 318
>gi|350399021|ref|XP_003485388.1| PREDICTED: splicing factor 45-like [Bombus impatiens]
Length = 383
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
Query: 21 EPEVKE--ECNTKYG--ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTA 73
EP + E +C +K NMVGPGEVD DLEPEVKDECNTKYG+V RVIIHE+ A
Sbjct: 276 EPSITEIMKCPSKVVLLRNMVGPGEVDDDLEPEVKDECNTKYGDVARVIIHEVTEAA 332
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPGEVD DLEPEVK+ECNTKYG+
Sbjct: 290 VLLRNMVGPGEVDDDLEPEVKDECNTKYGD 319
>gi|307184500|gb|EFN70889.1| Splicing factor 45 [Camponotus floridanus]
Length = 380
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
Query: 21 EPEVKE--ECNTKYG--ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTA 73
EP + E +C +K NMVGPGEVD DLEPEVKDECNTKYG+V RVIIHE+ A
Sbjct: 273 EPSITEIMKCPSKVVLLRNMVGPGEVDDDLEPEVKDECNTKYGDVARVIIHEVIEAA 329
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPGEVD DLEPEVK+ECNTKYG+
Sbjct: 287 VLLRNMVGPGEVDDDLEPEVKDECNTKYGD 316
>gi|156542185|ref|XP_001599827.1| PREDICTED: splicing factor 45 [Nasonia vitripennis]
Length = 383
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD DLEPEVKDECNTKYG+V+RV+IHE+
Sbjct: 294 NMVGPGEVDDDLEPEVKDECNTKYGDVIRVVIHEV 328
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPGEVD DLEPEVK+ECNTKYG+
Sbjct: 290 VLLRNMVGPGEVDDDLEPEVKDECNTKYGD 319
>gi|193613005|ref|XP_001950928.1| PREDICTED: splicing factor 45-like [Acyrthosiphon pisum]
gi|193629687|ref|XP_001945492.1| PREDICTED: splicing factor 45-like [Acyrthosiphon pisum]
Length = 404
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 24 VKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
+KE+ NMVGPGEVD DLEPEVKDECNTKYG+V +V+I+E+P
Sbjct: 304 MKEQSKVVLLRNMVGPGEVDQDLEPEVKDECNTKYGDVNKVVIYEVP 350
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPGEVD DLEPEVK+ECNTKYG+
Sbjct: 311 VLLRNMVGPGEVDQDLEPEVKDECNTKYGD 340
>gi|158300105|ref|XP_320093.4| AGAP009296-PA [Anopheles gambiae str. PEST]
gi|157013841|gb|EAA15153.4| AGAP009296-PA [Anopheles gambiae str. PEST]
Length = 426
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/36 (80%), Positives = 34/36 (94%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGPG+VD +LEPEVKDECNTKYG+VV V+IHE+P
Sbjct: 337 NMVGPGDVDDELEPEVKDECNTKYGDVVTVVIHEVP 372
>gi|307212516|gb|EFN88247.1| Splicing factor 45 [Harpegnathos saltator]
Length = 383
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 4/51 (7%)
Query: 21 EPEVKE--ECNTKYG--ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
EP + E +C +K NMVGPGEVD DLEPEVKDECNTKYG+V RVIIH
Sbjct: 276 EPSITEIMKCPSKVVLLRNMVGPGEVDDDLEPEVKDECNTKYGDVARVIIH 326
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPGEVD DLEPEVK+ECNTKYG+
Sbjct: 290 VLLRNMVGPGEVDDDLEPEVKDECNTKYGD 319
>gi|157115517|ref|XP_001658243.1| hypothetical protein AaeL_AAEL007239 [Aedes aegypti]
gi|108876860|gb|EAT41085.1| AAEL007239-PA [Aedes aegypti]
Length = 419
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/36 (77%), Positives = 34/36 (94%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGPG+VD +LEPEVKDECNTKYG+V+ V+IHE+P
Sbjct: 330 NMVGPGDVDDELEPEVKDECNTKYGDVITVVIHEIP 365
>gi|114051960|ref|NP_001040441.1| RNA binding motif protein 17 [Bombyx mori]
gi|95102902|gb|ABF51392.1| RNA binding motif protein 17 [Bombyx mori]
Length = 392
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 40/54 (74%), Gaps = 4/54 (7%)
Query: 21 EPEVKEECNTK----YGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
EP + E T + NMVGPG+VD +LEPEVKDECNTKYGEVV+V+I E+P
Sbjct: 285 EPSITEIMKTPSKVVWLRNMVGPGDVDEELEPEVKDECNTKYGEVVKVLIFEMP 338
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/26 (84%), Positives = 25/26 (96%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYGE 34
NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 303 NMVGPGDVDEELEPEVKDECNTKYGE 328
>gi|194877371|ref|XP_001973867.1| GG21408 [Drosophila erecta]
gi|190657054|gb|EDV54267.1| GG21408 [Drosophila erecta]
Length = 406
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 37/55 (67%)
Query: 14 GEVDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
GE S + +K NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 297 GETGSSITEIMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 351
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 314 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 343
>gi|109706823|gb|ABG42998.1| splicing factor 45 [Bombyx mori]
Length = 392
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/36 (80%), Positives = 34/36 (94%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGPG+VD +LEPEVKDECNTKYGEVV+V+I E+P
Sbjct: 303 NMVGPGDVDEELEPEVKDECNTKYGEVVKVLIFEMP 338
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 299 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 328
>gi|389612784|dbj|BAM19802.1| conserved hypothetical protein, partial [Papilio xuthus]
Length = 396
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 35/40 (87%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGPG+VD +LEPEVKDECNTKYG+V++V+I E+P N
Sbjct: 309 NMVGPGDVDEELEPEVKDECNTKYGDVIKVVIFEMPNAPN 348
>gi|91083973|ref|XP_975149.1| PREDICTED: similar to splicing factor 45 [Tribolium castaneum]
gi|270006716|gb|EFA03164.1| hypothetical protein TcasGA2_TC013083 [Tribolium castaneum]
Length = 387
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/35 (88%), Positives = 32/35 (91%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
+NMVGPGEVD DLEPEVKDECNTKYGEV VIIHE
Sbjct: 297 KNMVGPGEVDDDLEPEVKDECNTKYGEVTSVIIHE 331
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/30 (83%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPGEVD DLEPEVK+ECNTKYGE
Sbjct: 294 VLLKNMVGPGEVDDDLEPEVKDECNTKYGE 323
>gi|357623541|gb|EHJ74651.1| splicing factor 45 [Danaus plexippus]
Length = 394
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/36 (80%), Positives = 34/36 (94%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGPG+VD +LEPEVKDECNTKYGEVV+V+I E+P
Sbjct: 305 NMVGPGDVDEELEPEVKDECNTKYGEVVKVLIFEMP 340
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 301 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 330
>gi|194916573|ref|XP_001983016.1| GG11065 [Drosophila erecta]
gi|190647619|gb|EDV45013.1| GG11065 [Drosophila erecta]
Length = 200
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 37/55 (67%)
Query: 14 GEVDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
GE S + +K NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 91 GETGSSITEIMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 145
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 108 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 137
>gi|332374526|gb|AEE62404.1| unknown [Dendroctonus ponderosae]
Length = 392
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 32/37 (86%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
+NMVGPGEVD DLEPEVKDECNTKYG V IIHE+P
Sbjct: 302 KNMVGPGEVDDDLEPEVKDECNTKYGPVASCIIHEIP 338
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/29 (82%), Positives = 26/29 (89%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYG 33
+L NMVGPGEVD DLEPEVK+ECNTKYG
Sbjct: 299 VLLKNMVGPGEVDDDLEPEVKDECNTKYG 327
>gi|195116165|ref|XP_002002626.1| GI11727 [Drosophila mojavensis]
gi|193913201|gb|EDW12068.1| GI11727 [Drosophila mojavensis]
Length = 438
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 350 NMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 383
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 346 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 375
>gi|116007460|ref|NP_001036426.1| Spf45, isoform A [Drosophila melanogaster]
gi|30923530|gb|EAA46008.1| Spf45, isoform A [Drosophila melanogaster]
gi|83270221|gb|ABB99954.1| RNA binding motif protein 17 [Drosophila melanogaster]
gi|201065519|gb|ACH92169.1| FI02801p [Drosophila melanogaster]
Length = 403
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 315 NMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 348
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 311 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 340
>gi|195355939|ref|XP_002044442.1| GM11754 [Drosophila sechellia]
gi|194130810|gb|EDW52853.1| GM11754 [Drosophila sechellia]
Length = 400
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 10 MVGPGEVDSDLEPEV-KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
MVG D E+ K NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 286 MVGTASESGDSITEIMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 345
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 308 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 337
>gi|195552366|ref|XP_002076446.1| GD17712 [Drosophila simulans]
gi|194201699|gb|EDX15275.1| GD17712 [Drosophila simulans]
Length = 403
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 315 NMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 348
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 311 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 340
>gi|195355937|ref|XP_002044441.1| GM11755 [Drosophila sechellia]
gi|194130809|gb|EDW52852.1| GM11755 [Drosophila sechellia]
Length = 450
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 108 RNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 142
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 105 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 134
>gi|170054316|ref|XP_001863072.1| splicing factor 45 [Culex quinquefasciatus]
gi|167874592|gb|EDS37975.1| splicing factor 45 [Culex quinquefasciatus]
Length = 399
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/36 (75%), Positives = 34/36 (94%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGPG+VD DLEPEVKDEC+TKYG+V+ V+I+E+P
Sbjct: 311 NMVGPGDVDDDLEPEVKDECHTKYGDVITVVINEIP 346
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD DLEPEVK+EC+TKYG+
Sbjct: 307 VLLRNMVGPGDVDDDLEPEVKDECHTKYGD 336
>gi|195483222|ref|XP_002086892.1| GE10978 [Drosophila yakuba]
gi|194187173|gb|EDX00757.1| GE10978 [Drosophila yakuba]
Length = 367
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 37/55 (67%)
Query: 14 GEVDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
GE S + +K NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 258 GETGSTITEIMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 312
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 275 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 304
>gi|195051308|ref|XP_001993070.1| GH13625 [Drosophila grimshawi]
gi|193900129|gb|EDV98995.1| GH13625 [Drosophila grimshawi]
Length = 451
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 18 SDLEPEVKEECNTKYG----ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
SD EP + E NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 342 SDPEPSITEIMKAPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 396
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 359 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 388
>gi|17946228|gb|AAL49154.1| RE57542p [Drosophila melanogaster]
gi|220948600|gb|ACL86843.1| Spf45-PC [synthetic construct]
gi|220958036|gb|ACL91561.1| Spf45-PC [synthetic construct]
Length = 379
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 290 RNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 324
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 287 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 316
>gi|116007456|ref|NP_001036424.1| Spf45, isoform C [Drosophila melanogaster]
gi|51951005|gb|EAA46009.2| Spf45, isoform C [Drosophila melanogaster]
Length = 363
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 274 RNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 308
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 271 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 300
>gi|116007458|ref|NP_001036425.1| Spf45, isoform B [Drosophila melanogaster]
gi|46409150|gb|AAS93732.1| RE44883p [Drosophila melanogaster]
gi|51951006|gb|EAA46010.2| Spf45, isoform B [Drosophila melanogaster]
gi|220951092|gb|ACL88089.1| Spf45-PB [synthetic construct]
gi|220959676|gb|ACL92381.1| Spf45-PB [synthetic construct]
Length = 371
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 282 RNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 316
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 279 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 308
>gi|195385190|ref|XP_002051289.1| GJ13092 [Drosophila virilis]
gi|194147746|gb|EDW63444.1| GJ13092 [Drosophila virilis]
Length = 432
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 344 NMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 377
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 340 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 369
>gi|198473430|ref|XP_002133257.1| GA29081 [Drosophila pseudoobscura pseudoobscura]
gi|198139453|gb|EDY70659.1| GA29081 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 330 NMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 363
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 326 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 355
>gi|195164546|ref|XP_002023107.1| GL21138 [Drosophila persimilis]
gi|194105192|gb|EDW27235.1| GL21138 [Drosophila persimilis]
Length = 418
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 330 NMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 363
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 326 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 355
>gi|46409234|gb|AAS93774.1| AT25717p [Drosophila melanogaster]
Length = 363
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 275 NMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 308
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 271 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 300
>gi|194767538|ref|XP_001965872.1| GF15900 [Drosophila ananassae]
gi|190619348|gb|EDV34872.1| GF15900 [Drosophila ananassae]
Length = 401
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/39 (76%), Positives = 33/39 (84%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTA 73
NMVGPG+VD +LEPEVKDEC+TKYGEV VIIHE TA
Sbjct: 313 NMVGPGDVDEELEPEVKDECHTKYGEVNSVIIHEAFGTA 351
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+EC+TKYGE
Sbjct: 309 VLLRNMVGPGDVDEELEPEVKDECHTKYGE 338
>gi|195433330|ref|XP_002064668.1| GK23713 [Drosophila willistoni]
gi|194160753|gb|EDW75654.1| GK23713 [Drosophila willistoni]
Length = 443
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGPG+VD +LEPEVKDECNTKYGEV VIIHE
Sbjct: 355 NMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE 388
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPG+VD +LEPEVK+ECNTKYGE
Sbjct: 351 VLLRNMVGPGDVDEELEPEVKDECNTKYGE 380
>gi|321465609|gb|EFX76609.1| hypothetical protein DAPPUDRAFT_306107 [Daphnia pulex]
Length = 381
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 24 VKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
+K Y NMVGPGEVDSDLEPEV++EC TKYG+V +V+I E+P
Sbjct: 281 MKNPSKVIYLRNMVGPGEVDSDLEPEVREECQTKYGDVNKVVIFEVP 327
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/26 (88%), Positives = 25/26 (96%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYGE 34
NMVGPGEVDSDLEPEV+EEC TKYG+
Sbjct: 292 NMVGPGEVDSDLEPEVREECQTKYGD 317
>gi|427784315|gb|JAA57609.1| Putative mrna splicing factor [Rhipicephalus pulchellus]
Length = 386
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGPGEVD DLEPE K+EC +KYGEVVR +I+E+P A+
Sbjct: 298 NMVGPGEVDDDLEPETKEEC-SKYGEVVRCLIYEMPGVAD 336
>gi|427784313|gb|JAA57608.1| Putative spf45 [Rhipicephalus pulchellus]
Length = 386
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGPGEVD DLEPE K+EC +KYGEVVR +I+E+P A+
Sbjct: 298 NMVGPGEVDDDLEPETKEEC-SKYGEVVRCLIYEMPGVAD 336
>gi|241999926|ref|XP_002434606.1| DNA-damage-repair/toleration protein DRT111, putative [Ixodes
scapularis]
gi|215497936|gb|EEC07430.1| DNA-damage-repair/toleration protein DRT111, putative [Ixodes
scapularis]
Length = 379
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
+NMVGPGEVD DLEPE K+EC +KYGEVVR +I E+P ++
Sbjct: 290 KNMVGPGEVDEDLEPETKEEC-SKYGEVVRCLIFEIPGVSD 329
>gi|225710884|gb|ACO11288.1| Splicing factor 45 [Caligus rogercresseyi]
Length = 417
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTA 73
+NMVGPGEVD LEPEVK+ECN KYG+V++V+I+E ++
Sbjct: 326 KNMVGPGEVDEFLEPEVKEECNEKYGDVIKVVIYEFSNSS 365
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 25/30 (83%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPGEVD LEPEVKEECN KYG+
Sbjct: 323 VLCKNMVGPGEVDEFLEPEVKEECNEKYGD 352
>gi|391345056|ref|XP_003746809.1| PREDICTED: splicing factor 45-like [Metaseiulus occidentalis]
Length = 354
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/36 (72%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGPGEVD DLEPE K+EC +YGEVV+ +I+ELP
Sbjct: 265 NMVGPGEVDEDLEPETKEECG-RYGEVVKCVIYELP 299
>gi|449672593|ref|XP_004207745.1| PREDICTED: splicing factor 45-like [Hydra magnipapillata]
Length = 340
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 40/55 (72%)
Query: 16 VDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
++S++ ++K NMVGPGEVD +L+PE+++EC +KYGE+ +V+I E+P
Sbjct: 232 IESNITDKMKNPSKVVLLMNMVGPGEVDDELQPEIEEECGSKYGEINKVLIFEIP 286
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE-NMVGPGEVDSDLEPE 49
+L +NMVGPGEVD +L+PE++EEC +KYGE N V E+ +E E
Sbjct: 247 VLLMNMVGPGEVDDELQPEIEEECGSKYGEINKVLIFEIPDAVEEE 292
>gi|390337510|ref|XP_797513.2| PREDICTED: splicing factor 45-like isoform 2 [Strongylocentrotus
purpuratus]
gi|390337512|ref|XP_003724580.1| PREDICTED: splicing factor 45-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 418
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/36 (69%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGPGEVD DL+PE +EC +KYGEVV+V+I+E P
Sbjct: 330 NMVGPGEVDDDLQPETAEEC-SKYGEVVKVLIYEDP 364
>gi|291236494|ref|XP_002738177.1| PREDICTED: RNA binding motif protein 17-like [Saccoglossus
kowalevskii]
Length = 519
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/39 (69%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTA 73
NMVGPGEVD DLEPE +EC TKYG+V RV+I E+P A
Sbjct: 430 NMVGPGEVDDDLEPETAEEC-TKYGKVTRVLIFEIPGGA 467
>gi|405961750|gb|EKC27501.1| Xanthine dehydrogenase [Crassostrea gigas]
Length = 1588
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGPGEVD DLEPE +EC TKYG+V++ +I E+P
Sbjct: 1494 RNMVGPGEVDKDLEPETAEEC-TKYGKVIKCVIFEIP 1529
>gi|443690684|gb|ELT92746.1| hypothetical protein CAPTEDRAFT_28435, partial [Capitella teleta]
Length = 194
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGPGEVD DLEPE +EC KYG+V++ +I E+P
Sbjct: 90 RNMVGPGEVDDDLEPETAEEC-AKYGKVIKCVIFEIP 125
>gi|443689872|gb|ELT92163.1| hypothetical protein CAPTEDRAFT_67241, partial [Capitella teleta]
Length = 185
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGPGEVD DLEPE +EC KYG+V++ +I E+P
Sbjct: 78 RNMVGPGEVDDDLEPETAEEC-AKYGKVIKCVIFEIP 113
>gi|256084520|ref|XP_002578476.1| hypothetical protein [Schistosoma mansoni]
gi|353229232|emb|CCD75403.1| hypothetical protein Smp_161750 [Schistosoma mansoni]
Length = 472
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NM GPGEVD DLEPE +EC KYG+VV +I+ELP
Sbjct: 379 NMCGPGEVDDDLEPETAEEC-AKYGKVVMCMIYELP 413
>gi|340372917|ref|XP_003384990.1| PREDICTED: splicing factor 45-like [Amphimedon queenslandica]
Length = 425
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
ENMVG GEVD++L+PEV +EC TKYGEV +I+E+P A+
Sbjct: 334 ENMVGAGEVDNELQPEVIEEC-TKYGEVTNCLIYEIPEGAS 373
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
IL NMVG GEVD++L+PEV EEC TKYGE
Sbjct: 331 ILLENMVGAGEVDNELQPEVIEEC-TKYGE 359
>gi|260809958|ref|XP_002599771.1| hypothetical protein BRAFLDRAFT_205776 [Branchiostoma floridae]
gi|229285053|gb|EEN55783.1| hypothetical protein BRAFLDRAFT_205776 [Branchiostoma floridae]
Length = 382
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGPGEVD DLEPE +EC KYG+V +V+I E+P
Sbjct: 292 NMVGPGEVDDDLEPETAEEC-AKYGKVNKVVIFEMP 326
>gi|60600259|gb|AAX26673.1| unknown [Schistosoma japonicum]
Length = 182
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NM GPGEVD DLEPE +EC KYG+VV +I+ELP
Sbjct: 88 RNMCGPGEVDDDLEPETAEEC-AKYGKVVMCMIYELP 123
>gi|339252298|ref|XP_003371372.1| splicing factor 45 [Trichinella spiralis]
gi|316968403|gb|EFV52683.1| splicing factor 45 [Trichinella spiralis]
Length = 417
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTANV 75
NMVG GEVDS+L+PEV+DE KYGEV R ++ E+P ++V
Sbjct: 330 NMVGAGEVDSELQPEVQDEM-LKYGEVRRCMVVEVPNASDV 369
>gi|156302100|ref|XP_001617446.1| hypothetical protein NEMVEDRAFT_v1g231688 [Nematostella vectensis]
gi|156193855|gb|EDO25346.1| predicted protein [Nematostella vectensis]
Length = 158
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 34/69 (49%), Gaps = 27/69 (39%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRV 64
+L NMVGPGEVD DL+PE EEC KYGEVV+V
Sbjct: 63 VLLRNMVGPGEVDDDLQPETAEEC---------------------------AKYGEVVKV 95
Query: 65 IIHELPTTA 73
II+E+P A
Sbjct: 96 IIYEIPVGA 104
>gi|76162067|gb|AAX30164.2| SJCHGC01278 protein [Schistosoma japonicum]
Length = 73
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NM GPGEVD DLEPE +EC KYG+VV +I+ELP
Sbjct: 5 NMCGPGEVDDDLEPETAEEC-AKYGKVVMCMIYELP 39
>gi|156380987|ref|XP_001632048.1| predicted protein [Nematostella vectensis]
gi|156219098|gb|EDO39985.1| predicted protein [Nematostella vectensis]
Length = 396
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 34/69 (49%), Gaps = 27/69 (39%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRV 64
+L NMVGPGEVD DL+PE EEC KYGEVV+V
Sbjct: 301 VLLRNMVGPGEVDDDLQPETAEEC---------------------------AKYGEVVKV 333
Query: 65 IIHELPTTA 73
II+E+P A
Sbjct: 334 IIYEIPVGA 342
>gi|428166464|gb|EKX35439.1| hypothetical protein GUITHDRAFT_155487 [Guillardia theta
CCMP2712]
Length = 150
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTA 73
NMVG GEVD LE E K EC +KYG + R +IHELP A
Sbjct: 54 NMVGAGEVDERLEEETKQEC-SKYGFISRCVIHELPPGA 91
>gi|348684008|gb|EGZ23823.1| hypothetical protein PHYSODRAFT_255134 [Phytophthora sojae]
Length = 534
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
+NMVGPGEVD +L+ EVK EC+ KYG V + I+E+
Sbjct: 444 QNMVGPGEVDDELQDEVKGECSEKYGPVAKCTIYEV 479
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 19/29 (65%), Positives = 23/29 (79%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYG 33
+L NMVGPGEVD +L+ EVK EC+ KYG
Sbjct: 441 VLLQNMVGPGEVDDELQDEVKGECSEKYG 469
>gi|168057021|ref|XP_001780515.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667993|gb|EDQ54609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 382
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVDS+LE E+ EC +KYG V RV+I E+
Sbjct: 280 NMVGPGEVDSELEDEISSEC-SKYGTVTRVLIFEI 313
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 19/29 (65%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYG 33
+L NMVGPGEVDS+LE E+ EC +KYG
Sbjct: 276 VLLRNMVGPGEVDSELEDEISSEC-SKYG 303
>gi|358337076|dbj|GAA29745.2| splicing factor 45 [Clonorchis sinensis]
Length = 445
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTT 72
NM GPGEVD DL+PE +EC KYG+VV +I EL T
Sbjct: 351 RNMCGPGEVDDDLQPETAEEC-AKYGKVVSCMIFELADT 388
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
IL NM GPGEVD DL+PE EEC KYG+
Sbjct: 348 ILLRNMCGPGEVDDDLQPETAEEC-AKYGK 376
>gi|167536803|ref|XP_001750072.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771401|gb|EDQ85068.1| predicted protein [Monosiga brevicollis MX1]
Length = 475
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
+NMVGPGEVD DL+PE +EC +++G+V + + E P
Sbjct: 379 QNMVGPGEVDGDLQPETANEC-SRFGQVTKCTVFECP 414
Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVGPGEVD DL+PE EC +++G+
Sbjct: 376 VLLQNMVGPGEVDGDLQPETANEC-SRFGQ 404
>gi|55742338|ref|NP_001006732.1| RNA binding motif protein 17 [Xenopus (Silurana) tropicalis]
gi|49523277|gb|AAH75485.1| RNA binding motif protein 17 [Xenopus (Silurana) tropicalis]
gi|89268723|emb|CAJ82819.1| RNA binding motif protein 17 [Xenopus (Silurana) tropicalis]
Length = 399
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTT 72
+NMVG GEVD DLE E K+EC KYG+V + +I E+P T
Sbjct: 310 QNMVGAGEVDEDLEAETKEECE-KYGKVGKCVIFEIPGT 347
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLQNMVGAGEVDEDLEAETKEECE-KYGK 335
>gi|326514938|dbj|BAJ99830.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 638
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
+NMVGP EVD DL+ +V DEC +KYGEVV+V+I+
Sbjct: 546 KNMVGPDEVDDDLQQDVTDEC-SKYGEVVKVVIY 578
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYGE 34
NMVGP EVD DL+ +V +EC +KYGE
Sbjct: 547 NMVGPDEVDDDLQQDVTDEC-SKYGE 571
>gi|255564401|ref|XP_002523197.1| DNA-damage repair protein drt111, putative [Ricinus communis]
gi|223537604|gb|EEF39228.1| DNA-damage repair protein drt111, putative [Ricinus communis]
Length = 387
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 288 RNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI 322
>gi|224114585|ref|XP_002316803.1| predicted protein [Populus trichocarpa]
gi|222859868|gb|EEE97415.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 263 RNMVGPGEVDDELEDEVASEC-AKYGTVTRVLIFEI 297
>gi|440803557|gb|ELR24448.1| Gpatch domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 345
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGPGEVD DLE E +EC TKYG VVR I+E
Sbjct: 250 NMVGPGEVDEDLESETAEEC-TKYGPVVRCKIYE 282
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 22/29 (75%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYG 33
IL NMVGPGEVD DLE E EEC TKYG
Sbjct: 246 ILLRNMVGPGEVDEDLESETAEEC-TKYG 273
>gi|224061272|ref|XP_002300401.1| predicted protein [Populus trichocarpa]
gi|222847659|gb|EEE85206.1| predicted protein [Populus trichocarpa]
Length = 366
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 267 RNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI 301
>gi|357475093|ref|XP_003607832.1| DNA-damage-repair/toleration protein DRT111 [Medicago truncatula]
gi|355508887|gb|AES90029.1| DNA-damage-repair/toleration protein DRT111 [Medicago truncatula]
Length = 390
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 290 RNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI 324
>gi|297740820|emb|CBI31002.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 70 RNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI 104
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYG 33
+L NMVGPGEVD +LE EV EC KYG
Sbjct: 67 LLLRNMVGPGEVDDELEDEVGSEC-AKYG 94
>gi|357113978|ref|XP_003558778.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Brachypodium distachyon]
Length = 380
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 31/40 (77%), Gaps = 2/40 (5%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NM+GPGEVD +LE EV EC +K+G VVRV+I E+ T AN
Sbjct: 281 NMIGPGEVDDELEDEVAMEC-SKFGTVVRVLIFEI-TQAN 318
>gi|198437801|ref|XP_002129262.1| PREDICTED: similar to RNA binding motif protein 17 [Ciona
intestinalis]
Length = 378
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD DLE E K+EC +KYG V + +I E+
Sbjct: 287 NMVGPGEVDDDLEAETKEEC-SKYGSVNKCLIFEM 320
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 20/25 (80%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGPGEVD DLE E KEEC +KYG
Sbjct: 287 NMVGPGEVDDDLEAETKEEC-SKYG 310
>gi|194697730|gb|ACF82949.1| unknown [Zea mays]
gi|414885813|tpg|DAA61827.1| TPA: splicing factor 45 [Zea mays]
Length = 382
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 282 NMVGPGEVDDELEDEVASEC-AKYGTVSRVLIFEI 315
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGPGEVD +LE EV EC KYG
Sbjct: 282 NMVGPGEVDDELEDEVASEC-AKYG 305
>gi|195998107|ref|XP_002108922.1| hypothetical protein TRIADDRAFT_19511 [Trichoplax adhaerens]
gi|190589698|gb|EDV29720.1| hypothetical protein TRIADDRAFT_19511, partial [Trichoplax
adhaerens]
Length = 88
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 27/62 (43%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
N+VG GEVD DLEPE+ EECN+ YG V RV+IHE
Sbjct: 1 NIVGKGEVDDDLEPEIAEECNS---------------------------YGAVERVLIHE 33
Query: 69 LP 70
LP
Sbjct: 34 LP 35
>gi|226497132|ref|NP_001149789.1| LOC100283416 [Zea mays]
gi|195634671|gb|ACG36804.1| splicing factor 45 [Zea mays]
Length = 382
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 282 NMVGPGEVDDELEDEVASEC-AKYGTVSRVLIFEI 315
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGPGEVD +LE EV EC KYG
Sbjct: 282 NMVGPGEVDDELEDEVASEC-AKYG 305
>gi|432911999|ref|XP_004078817.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oryzias
latipes]
Length = 523
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K E NMVGP ++D DLE EV +EC KYG+V RVII++
Sbjct: 422 KRESTVMVLRNMVGPEDIDDDLEGEVTEECG-KYGQVKRVIIYQ 464
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYGE 34
NMVGP ++D DLE EV EEC KYG+
Sbjct: 432 NMVGPEDIDDDLEGEVTEECG-KYGQ 456
>gi|326503228|dbj|BAJ99239.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 383
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 31/40 (77%), Gaps = 2/40 (5%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NM+GPGEVD +LE E+ EC +K+G V+RV+I E+ T AN
Sbjct: 284 NMIGPGEVDDELEDEIASEC-SKFGAVLRVLIFEI-TQAN 321
>gi|326488349|dbj|BAJ93843.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512194|dbj|BAJ96078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 383
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 31/40 (77%), Gaps = 2/40 (5%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NM+GPGEVD +LE E+ EC +K+G V+RV+I E+ T AN
Sbjct: 284 NMIGPGEVDDELEDEIASEC-SKFGAVLRVLIFEI-TQAN 321
>gi|147807935|emb|CAN77677.1| hypothetical protein VITISV_023439 [Vitis vinifera]
Length = 366
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 267 NMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI 300
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGPGEVD +LE EV EC KYG
Sbjct: 267 NMVGPGEVDDELEDEVGSEC-AKYG 290
>gi|242092048|ref|XP_002436514.1| hypothetical protein SORBIDRAFT_10g003990 [Sorghum bicolor]
gi|241914737|gb|EER87881.1| hypothetical protein SORBIDRAFT_10g003990 [Sorghum bicolor]
Length = 384
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 284 NMVGPGEVDDELEDEVASEC-AKYGTVSRVLIFEI 317
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGPGEVD +LE EV EC KYG
Sbjct: 284 NMVGPGEVDDELEDEVASEC-AKYG 307
>gi|41055474|ref|NP_957209.1| splicing factor 45 [Danio rerio]
gi|28278930|gb|AAH45473.1| RNA binding motif protein 17 [Danio rerio]
gi|182890562|gb|AAI64722.1| Rbm17 protein [Danio rerio]
Length = 418
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVG GEVD DLE E K+EC KYG+VVR +I E+
Sbjct: 328 NMVGRGEVDEDLEAETKEECE-KYGKVVRCVIFEI 361
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 324 VLLRNMVGRGEVDEDLEAETKEECE-KYGK 352
>gi|413953116|gb|AFW85765.1| splicing factor 45 [Zea mays]
Length = 384
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC +YG V RV+I E+
Sbjct: 284 NMVGPGEVDDELEDEVASEC-ARYGTVSRVLIFEI 317
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 17/25 (68%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGPGEVD +LE EV EC +YG
Sbjct: 284 NMVGPGEVDDELEDEVASEC-ARYG 307
>gi|297845986|ref|XP_002890874.1| hypothetical protein ARALYDRAFT_473276 [Arabidopsis lyrata subsp.
lyrata]
gi|297336716|gb|EFH67133.1| hypothetical protein ARALYDRAFT_473276 [Arabidopsis lyrata subsp.
lyrata]
Length = 385
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 286 RNMVGPGEVDDELEDEVGGECG-KYGTVTRVLIFEI 320
>gi|226500638|ref|NP_001149001.1| splicing factor 45 [Zea mays]
gi|195623866|gb|ACG33763.1| splicing factor 45 [Zea mays]
Length = 384
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC +YG V RV+I E+
Sbjct: 284 NMVGPGEVDDELEDEVASEC-ARYGTVSRVLIFEI 317
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 17/25 (68%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGPGEVD +LE EV EC +YG
Sbjct: 284 NMVGPGEVDDELEDEVASEC-ARYG 307
>gi|225444029|ref|XP_002281743.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic [Vitis vinifera]
Length = 383
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 284 NMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI 317
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGPGEVD +LE EV EC KYG
Sbjct: 284 NMVGPGEVDDELEDEVGSEC-AKYG 307
>gi|432942100|ref|XP_004082959.1| PREDICTED: splicing factor 45-like [Oryzias latipes]
Length = 164
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+VV+ +I E+
Sbjct: 73 RNMVGRGEVDEDLEGETKEECE-KYGKVVKCVIFEIA 108
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 70 VLLRNMVGRGEVDEDLEGETKEECE-KYGK 98
>gi|410925539|ref|XP_003976238.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Takifugu
rubripes]
Length = 506
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMVGP ++D DLE EV +EC K+G+V RVII++
Sbjct: 405 KQESTVMVLRNMVGPDDIDDDLEGEVTEECG-KFGQVKRVIIYQ 447
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 16/26 (61%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYGE 34
NMVGP ++D DLE EV EEC K+G+
Sbjct: 415 NMVGPDDIDDDLEGEVTEECG-KFGQ 439
>gi|356521610|ref|XP_003529447.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Glycine max]
Length = 384
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 284 RNMVGPGEVDDELEDEVGSEC-AKYGIVTRVLIFEI 318
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYG 33
+L NMVGPGEVD +LE EV EC KYG
Sbjct: 281 LLLRNMVGPGEVDDELEDEVGSEC-AKYG 308
>gi|325191168|emb|CCA25956.1| Poly(U)bindingsplicing factor PUF60 putative [Albugo laibachii
Nc14]
Length = 454
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 16 VDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTANV 75
++ LE E KEE N++ PG+VD +L EV EC +KYG++ +V+IHEL + +
Sbjct: 350 IEPILELEEKEEQICLCLLNLIKPGDVDENLRGEVASEC-SKYGDIAQVVIHELSSHVRI 408
>gi|348541381|ref|XP_003458165.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oreochromis
niloticus]
Length = 513
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMVGP ++D DLE EV +EC K+G+V RVII++
Sbjct: 412 KQESTVMVLRNMVGPDDIDDDLEGEVTEECG-KFGQVKRVIIYQ 454
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 16/26 (61%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYGE 34
NMVGP ++D DLE EV EEC K+G+
Sbjct: 422 NMVGPDDIDDDLEGEVTEECG-KFGQ 446
>gi|73949102|ref|XP_849339.1| PREDICTED: splicing factor 45 isoform 2 [Canis lupus familiaris]
gi|301769963|ref|XP_002920393.1| PREDICTED: splicing factor 45-like [Ailuropoda melanoleuca]
gi|410963149|ref|XP_003988128.1| PREDICTED: splicing factor 45 [Felis catus]
gi|281347515|gb|EFB23099.1| hypothetical protein PANDA_009135 [Ailuropoda melanoleuca]
Length = 401
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 310 RNMVGAGEVDEDLEAETKEECE-KYGKVGKCVIFEIP 345
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEAETKEECE-KYGK 335
>gi|47212475|emb|CAF90271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 579
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMVGPG++D LE EV +EC K+G V RVI+++
Sbjct: 478 KQESTVMVLRNMVGPGDIDDALEGEVTEECG-KFGRVKRVIVYQ 520
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGPG++D LE EV EEC K+G
Sbjct: 488 NMVGPGDIDDALEGEVTEECG-KFG 511
>gi|356576849|ref|XP_003556542.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Glycine max]
Length = 392
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 293 NMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI 326
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGPGEVD +LE EV EC KYG
Sbjct: 293 NMVGPGEVDDELEDEVGSEC-AKYG 316
>gi|119606812|gb|EAW86406.1| RNA binding motif protein 17, isoform CRA_b [Homo sapiens]
Length = 127
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 36 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 71
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 33 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 61
>gi|90086107|dbj|BAE91606.1| unnamed protein product [Macaca fascicularis]
Length = 124
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 33 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 68
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 4 TILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 29 VVLLRNMVGAGEVDEDLEVETKEECE-KYGK 58
>gi|15220757|ref|NP_174336.1| DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana]
gi|20141383|sp|P42698.2|DR111_ARATH RecName: Full=DNA-damage-repair/toleration protein DRT111,
chloroplastic; Flags: Precursor
gi|6634771|gb|AAF19751.1|AC009917_10 Strong similarity to gi|1169200 DNA-Damage-Repair/Toleration
protein (DRT111) precurser, and contains a G-patch
PF|01585 domain and RNA recognition PF|00076 motif. EST
gb|AA395591 comes from this gene [Arabidopsis thaliana]
gi|15028005|gb|AAK76533.1| putative DNA damage repair protein [Arabidopsis thaliana]
gi|20259641|gb|AAM14338.1| putative DNA damage repair protein [Arabidopsis thaliana]
gi|332193110|gb|AEE31231.1| DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana]
Length = 387
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPG+VD +LE EV EC KYG V RV+I E+
Sbjct: 288 RNMVGPGQVDDELEDEVGGECG-KYGTVTRVLIFEI 322
>gi|149436980|ref|XP_001510396.1| PREDICTED: splicing factor 45 isoform 2 [Ornithorhynchus anatinus]
Length = 401
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 310 RNMVGAGEVDEDLEGETKEECE-KYGKVGKCVIFEIP 345
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEGETKEECE-KYGK 335
>gi|151567827|pdb|2PE8|A Chain A, Crystal Structure Of The Uhm Domain Of Human Spf45 (free
Form)
gi|151567828|pdb|2PEH|A Chain A, Crystal Structure Of The Uhm Domain Of Human Spf45 In
Complex With Sf3b155-Ulm5
gi|151567830|pdb|2PEH|B Chain B, Crystal Structure Of The Uhm Domain Of Human Spf45 In
Complex With Sf3b155-Ulm5
Length = 105
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 14 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 49
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 4 TILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 10 VVLLRNMVGAGEVDEDLEVETKEECE-KYGK 39
>gi|166694|gb|AAA73382.1| unnamed protein product [Arabidopsis thaliana]
Length = 383
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPG+VD +LE EV EC KYG V RV+I E+
Sbjct: 284 RNMVGPGQVDDELEDEVGGEC-AKYGTVTRVLIFEI 318
>gi|432089731|gb|ELK23548.1| Splicing factor 45 [Myotis davidii]
Length = 440
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 350 NMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 384
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 346 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 374
>gi|22779924|ref|NP_690037.1| splicing factor 45 [Mus musculus]
gi|34925312|sp|Q8JZX4.1|SPF45_MOUSE RecName: Full=Splicing factor 45; AltName: Full=45 kDa-splicing
factor; AltName: Full=RNA-binding motif protein 17
gi|3746840|gb|AAC64085.1| 45kDa splicing factor [Mus musculus]
gi|22028328|gb|AAH34896.1| RNA binding motif protein 17 [Mus musculus]
Length = 405
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 314 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 349
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 311 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 339
>gi|350589637|ref|XP_003130870.3| PREDICTED: splicing factor 45 [Sus scrofa]
Length = 401
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 310 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|50729326|ref|XP_416473.1| PREDICTED: splicing factor 45 [Gallus gallus]
Length = 402
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 311 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 346
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 308 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 336
>gi|155371897|ref|NP_001094553.1| splicing factor 45 [Bos taurus]
gi|426240678|ref|XP_004014221.1| PREDICTED: splicing factor 45 [Ovis aries]
gi|154426050|gb|AAI51378.1| RBM17 protein [Bos taurus]
gi|296481516|tpg|DAA23631.1| TPA: RNA binding motif protein 17 [Bos taurus]
gi|440906277|gb|ELR56559.1| Splicing factor 45 [Bos grunniens mutus]
Length = 401
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 310 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|14249678|ref|NP_116294.1| splicing factor 45 [Homo sapiens]
gi|224549005|ref|NP_001139019.1| splicing factor 45 [Homo sapiens]
gi|383873015|ref|NP_001244661.1| splicing factor 45 [Macaca mulatta]
gi|114629220|ref|XP_001147496.1| PREDICTED: splicing factor 45 isoform 5 [Pan troglodytes]
gi|114629223|ref|XP_001147721.1| PREDICTED: splicing factor 45 isoform 7 [Pan troglodytes]
gi|297685979|ref|XP_002820545.1| PREDICTED: splicing factor 45 isoform 1 [Pongo abelii]
gi|297685981|ref|XP_002820546.1| PREDICTED: splicing factor 45 isoform 2 [Pongo abelii]
gi|332217040|ref|XP_003257661.1| PREDICTED: splicing factor 45 [Nomascus leucogenys]
gi|397515197|ref|XP_003827843.1| PREDICTED: splicing factor 45 [Pan paniscus]
gi|402879580|ref|XP_003903412.1| PREDICTED: splicing factor 45 isoform 1 [Papio anubis]
gi|402879582|ref|XP_003903413.1| PREDICTED: splicing factor 45 isoform 2 [Papio anubis]
gi|34925383|sp|Q96I25.1|SPF45_HUMAN RecName: Full=Splicing factor 45; AltName: Full=45 kDa-splicing
factor; AltName: Full=RNA-binding motif protein 17
gi|14043850|gb|AAH07871.1| RNA binding motif protein 17 [Homo sapiens]
gi|25058249|gb|AAH39322.1| RBM17 protein [Homo sapiens]
gi|33328180|gb|AAQ09533.1| unknown [Homo sapiens]
gi|119606811|gb|EAW86405.1| RNA binding motif protein 17, isoform CRA_a [Homo sapiens]
gi|119606816|gb|EAW86410.1| RNA binding motif protein 17, isoform CRA_a [Homo sapiens]
gi|189067475|dbj|BAG37457.1| unnamed protein product [Homo sapiens]
gi|261861104|dbj|BAI47074.1| RNA binding motif protein 17 [synthetic construct]
gi|312152378|gb|ADQ32701.1| RNA binding motif protein 17 [synthetic construct]
gi|355562276|gb|EHH18870.1| 45 kDa-splicing factor [Macaca mulatta]
gi|380784085|gb|AFE63918.1| splicing factor 45 [Macaca mulatta]
gi|383414113|gb|AFH30270.1| splicing factor 45 [Macaca mulatta]
gi|410227696|gb|JAA11067.1| RNA binding motif protein 17 [Pan troglodytes]
gi|410251468|gb|JAA13701.1| RNA binding motif protein 17 [Pan troglodytes]
gi|410303376|gb|JAA30288.1| RNA binding motif protein 17 [Pan troglodytes]
gi|410336885|gb|JAA37389.1| RNA binding motif protein 17 [Pan troglodytes]
Length = 401
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 310 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|395827373|ref|XP_003786879.1| PREDICTED: splicing factor 45 [Otolemur garnettii]
Length = 401
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 310 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|296206115|ref|XP_002750072.1| PREDICTED: splicing factor 45 [Callithrix jacchus]
Length = 401
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 310 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|61556823|ref|NP_001013076.1| splicing factor 45 [Rattus norvegicus]
gi|354465034|ref|XP_003494985.1| PREDICTED: splicing factor 45 [Cricetulus griseus]
gi|50927039|gb|AAH79248.1| RNA binding motif protein 17 [Rattus norvegicus]
gi|344238978|gb|EGV95081.1| Splicing factor 45 [Cricetulus griseus]
Length = 405
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 314 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 349
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 311 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 339
>gi|326911058|ref|XP_003201879.1| PREDICTED: splicing factor 45-like [Meleagris gallopavo]
Length = 402
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 311 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 346
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 308 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 336
>gi|224092741|ref|XP_002189506.1| PREDICTED: splicing factor 45 [Taeniopygia guttata]
Length = 401
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 310 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|431917634|gb|ELK16899.1| Splicing factor 45 [Pteropus alecto]
Length = 401
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 310 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|449266291|gb|EMC77359.1| Splicing factor 45 [Columba livia]
Length = 401
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 310 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|417400279|gb|JAA47094.1| Putative mrna splicing factor [Desmodus rotundus]
Length = 401
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 310 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|349604885|gb|AEQ00311.1| Splicing factor 45-like protein, partial [Equus caballus]
Length = 269
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 178 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 213
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 175 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 203
>gi|355782616|gb|EHH64537.1| 45 kDa-splicing factor [Macaca fascicularis]
Length = 401
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 310 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|303281406|ref|XP_003059995.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458650|gb|EEH55947.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 206
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NM+GPGEVD DLE EV +EC K+G V RV+I E+
Sbjct: 106 RNMIGPGEVDEDLEDEVAEECE-KHGAVHRVMIFEV 140
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYG 33
+L NM+GPGEVD DLE EV EEC K+G
Sbjct: 103 LLLRNMIGPGEVDEDLEDEVAEECE-KHG 130
>gi|126340342|ref|XP_001362735.1| PREDICTED: splicing factor 45 isoform 2 [Monodelphis domestica]
gi|395538974|ref|XP_003771449.1| PREDICTED: splicing factor 45 [Sarcophilus harrisii]
Length = 401
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 311 NMVGAGEVDEDLEGETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEGETKEECE-KYGK 335
>gi|403296380|ref|XP_003939089.1| PREDICTED: splicing factor 45 [Saimiri boliviensis boliviensis]
Length = 401
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 311 NMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|149743592|ref|XP_001500189.1| PREDICTED: splicing factor 45 isoform 1 [Equus caballus]
Length = 401
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 311 NMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|391343712|ref|XP_003746150.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Metaseiulus
occidentalis]
Length = 562
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 20 LEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
+ + +E+C NMVG EVD DLEPE+ +EC K+G+V +V+IH
Sbjct: 456 MRTKTREQC-VMILRNMVGADEVDEDLEPEISEECG-KFGKVQKVLIH 501
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYGE 34
NMVG EVD DLEPE+ EEC K+G+
Sbjct: 470 NMVGADEVDEDLEPEISEECG-KFGK 494
>gi|344277716|ref|XP_003410644.1| PREDICTED: splicing factor 45 [Loxodonta africana]
Length = 401
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 311 NMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 345
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|348575588|ref|XP_003473570.1| PREDICTED: splicing factor 45 [Cavia porcellus]
Length = 386
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 296 NMVGAGEVDEDLEIETKEECE-KYGKVGKCVIFEIP 330
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 292 VLLRNMVGAGEVDEDLEIETKEECE-KYGK 320
>gi|14290573|gb|AAH09064.1| RBM17 protein, partial [Homo sapiens]
Length = 369
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 278 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 313
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 275 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 303
>gi|348536528|ref|XP_003455748.1| PREDICTED: splicing factor 45-like [Oreochromis niloticus]
Length = 403
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVG GEVD DLE E K+EC KYG+VV+ +I E+
Sbjct: 313 NMVGRGEVDEDLEGETKEECE-KYGKVVKCVIFEI 346
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 309 VLLRNMVGRGEVDEDLEGETKEECE-KYGK 337
>gi|327272018|ref|XP_003220783.1| PREDICTED: splicing factor 45-like [Anolis carolinensis]
Length = 379
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 288 RNMVGAGEVDEDLEGETKEECE-KYGKVGKCVIFEIP 323
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 285 VLLRNMVGAGEVDEDLEGETKEECE-KYGK 313
>gi|351708186|gb|EHB11105.1| Splicing factor 45 [Heterocephalus glaber]
Length = 405
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 315 NMVGAGEVDEDLEIETKEECE-KYGKVGKCVIFEIP 349
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 311 VLLRNMVGAGEVDEDLEIETKEECE-KYGK 339
>gi|302825086|ref|XP_002994178.1| hypothetical protein SELMODRAFT_163366 [Selaginella moellendorffii]
gi|300137979|gb|EFJ04768.1| hypothetical protein SELMODRAFT_163366 [Selaginella moellendorffii]
Length = 399
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD++LE EV EC +K+G V V+I E+
Sbjct: 304 NMVGPGEVDAELEEEVASEC-SKFGVVTSVLIFEI 337
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYG 33
+L NMVGPGEVD++LE EV EC +K+G
Sbjct: 300 VLLRNMVGPGEVDAELEEEVASEC-SKFG 327
>gi|302764030|ref|XP_002965436.1| hypothetical protein SELMODRAFT_84505 [Selaginella moellendorffii]
gi|300166250|gb|EFJ32856.1| hypothetical protein SELMODRAFT_84505 [Selaginella moellendorffii]
Length = 393
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD++LE EV EC +K+G V V+I E+
Sbjct: 298 NMVGPGEVDAELEEEVASEC-SKFGVVTSVLIFEI 331
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYG 33
+L NMVGPGEVD++LE EV EC +K+G
Sbjct: 294 VLLRNMVGPGEVDAELEEEVASEC-SKFG 321
>gi|148666907|gb|EDK99323.1| mCG1036453 [Mus musculus]
Length = 358
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 268 NMVGAGEVDKDLEVETKEECE-KYGKVGKCVIFEIP 302
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 264 VLLRNMVGAGEVDKDLEVETKEECE-KYGK 292
>gi|320164853|gb|EFW41752.1| Rbm17 protein [Capsaspora owczarzaki ATCC 30864]
Length = 614
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
ENMVGPGEVD DL+ EV +E + K+G+V + ++ E+P
Sbjct: 522 ENMVGPGEVDDDLQAEVTEE-SEKFGKVKQCLVFEVP 557
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYGE 34
NMVGPGEVD DL+ EV EE + K+G+
Sbjct: 523 NMVGPGEVDDDLQAEVTEE-SEKFGK 547
>gi|384493179|gb|EIE83670.1| hypothetical protein RO3G_08375 [Rhizopus delemar RA 99-880]
Length = 475
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGPGEVD L+ E +EC +KYG+V R +I E+P
Sbjct: 377 NMVGPGEVDDMLQEETAEEC-SKYGKVERCLIFEVP 411
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 4 TILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
TIL NMVGPGEVD L+ E EEC +KYG+
Sbjct: 372 TILLTNMVGPGEVDDMLQEETAEEC-SKYGK 401
>gi|157743332|ref|NP_001099058.1| poly(U)-binding-splicing factor PUF60 [Danio rerio]
gi|157423233|gb|AAI53302.1| LOC562370 protein [Danio rerio]
Length = 518
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMVGP ++D DLE EV +EC K+G V RVII++
Sbjct: 417 KQESTVMVLRNMVGPEDIDDDLEGEVTEECG-KFGAVNRVIIYQ 459
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGP ++D DLE EV EEC K+G
Sbjct: 427 NMVGPEDIDDDLEGEVTEECG-KFG 450
>gi|444724401|gb|ELW65006.1| Splicing factor 45 [Tupaia chinensis]
Length = 510
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E P
Sbjct: 370 NMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFESP 404
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 366 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 394
>gi|343958878|dbj|BAK63294.1| splicing factor 45 [Pan troglodytes]
Length = 401
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC KYG+V + +I E P
Sbjct: 310 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFETP 345
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|296473885|tpg|DAA16000.1| TPA: RNA binding motif protein 17-like [Bos taurus]
Length = 401
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DL+ E K+EC KYG+V + +I E+P
Sbjct: 310 RNMVGAGEVDEDLKVETKEECE-KYGKVGKCVIFEIP 345
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DL+ E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLKVETKEECE-KYGK 335
>gi|358334696|dbj|GAA40294.2| poly(U)-binding-splicing factor PUF60, partial [Clonorchis
sinensis]
Length = 519
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVGP + D +LE EV EC ++YG V RVI+H+ P
Sbjct: 430 NMVGPEDCDDELEGEVTAEC-SRYGSVQRVIVHQEP 464
>gi|160332383|sp|Q6IQE0.2|PU60B_DANRE RecName: Full=Poly(U)-binding-splicing factor PUF60-B
Length = 516
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGP ++D DLE EV +EC KYG V RVII++
Sbjct: 425 NMVGPEDIDDDLEGEVMEECG-KYGAVNRVIIYQ 457
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 17/25 (68%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGP ++D DLE EV EEC KYG
Sbjct: 425 NMVGPEDIDDDLEGEVMEECG-KYG 448
>gi|324513162|gb|ADY45418.1| Splicing factor 45 [Ascaris suum]
Length = 418
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
+NMV P E+D LEPEVKDE KYG+V +V+I+ L
Sbjct: 302 QNMVSPEEIDDQLEPEVKDEMK-KYGQVNKVLIYRL 336
>gi|317420076|emb|CBN82112.1| Poly(U)-binding-splicing factor PUF60 [Dicentrarchus labrax]
Length = 513
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K E NMVGP ++D DLE EV +EC K+G V RVII++
Sbjct: 412 KSESTVMVLRNMVGPEDIDDDLEGEVTEECG-KFGSVNRVIIYQ 454
Score = 34.7 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGP ++D DLE EV EEC K+G
Sbjct: 422 NMVGPEDIDDDLEGEVTEECG-KFG 445
>gi|348503274|ref|XP_003439190.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oreochromis
niloticus]
Length = 526
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K E NMVGP ++D DLE EV +EC K+G V RVII++
Sbjct: 425 KSESTVMVLRNMVGPEDIDDDLEGEVTEECG-KFGSVNRVIIYQ 467
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGP ++D DLE EV EEC K+G
Sbjct: 435 NMVGPEDIDDDLEGEVTEECG-KFG 458
>gi|312071759|ref|XP_003138756.1| G-patch domain-containing protein [Loa loa]
gi|307766078|gb|EFO25312.1| G-patch domain-containing protein [Loa loa]
Length = 373
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMV P E+D LEPEVKDE KYG+V +V+I L
Sbjct: 285 NMVSPAEIDDQLEPEVKDEMK-KYGQVNKVVIFRL 318
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 16/26 (61%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYGE 34
NMV P E+D LEPEVK+E KYG+
Sbjct: 285 NMVSPAEIDDQLEPEVKDEMK-KYGQ 309
>gi|432929636|ref|XP_004081203.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oryzias
latipes]
Length = 526
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K E NMVGP ++D DLE EV +EC K+G V RVII++
Sbjct: 425 KSESTVMVLRNMVGPEDIDDDLEGEVTEECG-KFGTVNRVIIYQ 467
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGP ++D DLE EV EEC K+G
Sbjct: 435 NMVGPEDIDDDLEGEVTEECG-KFG 458
>gi|47221195|emb|CAG05516.1| unnamed protein product [Tetraodon nigroviridis]
Length = 520
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K E NMVGP ++D DLE EV +EC K+G V RVII++
Sbjct: 419 KSESTVMVLRNMVGPEDIDDDLEGEVTEECG-KFGTVNRVIIYQ 461
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGP ++D DLE EV EEC K+G
Sbjct: 429 NMVGPEDIDDDLEGEVTEECG-KFG 452
>gi|50344898|ref|NP_001002121.1| poly(U)-binding-splicing factor PUF60-B [Danio rerio]
gi|47940403|gb|AAH71467.1| Poly-U binding splicing factor b [Danio rerio]
Length = 502
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGP ++D DLE EV +EC KYG V RVII++
Sbjct: 411 NMVGPEDIDDDLEGEVMEECG-KYGAVNRVIIYQ 443
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 17/25 (68%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGP ++D DLE EV EEC KYG
Sbjct: 411 NMVGPEDIDDDLEGEVMEECG-KYG 434
>gi|410909355|ref|XP_003968156.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Takifugu
rubripes]
Length = 526
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K E NMVGP ++D DLE EV +EC K+G V RVII++
Sbjct: 425 KSESTVMVLRNMVGPEDIDDDLEGEVTEECG-KFGTVNRVIIYQ 467
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYG 33
NMVGP ++D DLE EV EEC K+G
Sbjct: 435 NMVGPEDIDDDLEGEVTEECG-KFG 458
>gi|353239145|emb|CCA71067.1| hypothetical protein PIIN_05002 [Piriformospora indica DSM 11827]
Length = 626
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 11/68 (16%)
Query: 16 VDSDLEPEVKEECNTKYGE--------NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
V++ E ++K + +YGE NMVGP +VD DL+ E+ DEC +K+G V RV++H
Sbjct: 508 VNAQAEEKIKADL-LRYGESSRIVVLTNMVGPEDVDDDLQGEIGDEC-SKHGTVERVVVH 565
Query: 68 -ELPTTAN 74
PT N
Sbjct: 566 LPYPTPDN 573
>gi|118785284|ref|XP_314526.3| AGAP010553-PA [Anopheles gambiae str. PEST]
gi|116128011|gb|EAA09944.4| AGAP010553-PA [Anopheles gambiae str. PEST]
Length = 643
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGP +VD L+ E++DEC +KYG V RVII++
Sbjct: 547 NMVGPEDVDETLQEEIQDEC-SKYGAVDRVIIYK 579
>gi|401406015|ref|XP_003882457.1| GA11385, related [Neospora caninum Liverpool]
gi|325116872|emb|CBZ52425.1| GA11385, related [Neospora caninum Liverpool]
Length = 564
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTANV 75
NMV P EVD +L+ EV+DEC +K+G + RV +H L T +
Sbjct: 481 NMVTPSEVDGELKDEVRDEC-SKFGGIKRVEVHTLKDTVRI 520
>gi|260828249|ref|XP_002609076.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
gi|229294430|gb|EEN65086.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
Length = 495
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K E N NMVG ++D +LE EV DEC KYG+V RVII++
Sbjct: 394 KSESNVMILRNMVGIEDLDDELEGEVTDECG-KYGQVNRVIIYQ 436
>gi|84996941|ref|XP_953192.1| RNA binding protein [Theileria annulata strain Ankara]
gi|65304188|emb|CAI76567.1| RNA binding protein, putative [Theileria annulata]
Length = 479
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTANVA 76
NMV P VD +L+ EVKDECN KYG V V +H P +++
Sbjct: 394 NMVDPKLVDENLQNEVKDECN-KYGTVTSVYLHFSPNNDSLS 434
>gi|289724641|gb|ADD18299.1| poly-U binding splicing factor [Glossina morsitans morsitans]
Length = 611
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGP +VD L+ E+++EC TK+G V RVII T N
Sbjct: 517 NMVGPEDVDETLQEEIQEEC-TKFGTVSRVIIFNEKQTEN 555
>gi|119606815|gb|EAW86409.1| RNA binding motif protein 17, isoform CRA_e [Homo sapiens]
Length = 57
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 36 MVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
MVG GEVD DLE E K+EC KYG+V + +I E+P
Sbjct: 1 MVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIP 34
>gi|339522017|gb|AEJ84173.1| RNA-binding motif protein 17 [Capra hircus]
Length = 401
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+ C KYG+V + +I E+P
Sbjct: 311 NMVGAGEVDGDLEVETKEGCE-KYGKVGKCVIFEIP 345
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KE C KYG+
Sbjct: 307 VLLRNMVGAGEVDGDLEVETKEGCE-KYGK 335
>gi|170588083|ref|XP_001898803.1| G-patch domain containing protein [Brugia malayi]
gi|158593016|gb|EDP31611.1| G-patch domain containing protein [Brugia malayi]
Length = 373
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMV P E+D LEPEVKDE KYG+V +V+I L
Sbjct: 285 NMVSPDEIDDQLEPEVKDEMK-KYGQVNKVVIFRL 318
>gi|402594800|gb|EJW88726.1| G-patch domain-containing protein [Wuchereria bancrofti]
Length = 373
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMV P E+D LEPEVKDE KYG+V +V+I L
Sbjct: 285 NMVSPDEIDDQLEPEVKDEMK-KYGQVNKVVIFRL 318
>gi|149731824|ref|XP_001494792.1| PREDICTED: splicing factor 45-like [Equus caballus]
Length = 401
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVG GEVD DLE E K+EC KYG+V + +I E+
Sbjct: 310 RNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEI 344
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG GEVD DLE E KEEC KYG+
Sbjct: 307 VLLRNMVGAGEVDEDLEVETKEECE-KYGK 335
>gi|237836525|ref|XP_002367560.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211965224|gb|EEB00420.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221484014|gb|EEE22318.1| hypothetical protein TGGT1_018190 [Toxoplasma gondii GT1]
gi|221505287|gb|EEE30941.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 532
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTANV 75
NMV P EVD +L+ EV++EC +K+G + RV +H L T +
Sbjct: 449 NMVTPSEVDGELKDEVREEC-SKFGSIKRVEVHTLKETVRI 488
>gi|449279837|gb|EMC87291.1| Poly(U)-binding-splicing factor PUF60, partial [Columba livia]
Length = 513
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 412 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 454
>gi|345315810|ref|XP_001511498.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like
[Ornithorhynchus anatinus]
Length = 499
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 398 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 440
>gi|256073105|ref|XP_002572873.1| fuse-binding protein-interacting repressor siahbp1 [Schistosoma
mansoni]
Length = 534
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
ENMVG EVD +L+ EV +EC YG V+RV+IH
Sbjct: 449 ENMVGVNEVDDELQEEVMEECGN-YGSVLRVLIH 481
>gi|224113627|ref|XP_002332520.1| predicted protein [Populus trichocarpa]
gi|222832632|gb|EEE71109.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 37 VGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
VGPGEVD +LE EV EC KYG V RV+I E+
Sbjct: 1 VGPGEVDDELEDEVASEC-AKYGTVTRVLIFEI 32
>gi|355780002|gb|EHH64478.1| 60 kDa poly(U)-binding-splicing factor [Macaca fascicularis]
Length = 521
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 420 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 462
>gi|432098308|gb|ELK28110.1| Splicing factor 45 [Myotis davidii]
Length = 127
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC K G+V + +I E+P
Sbjct: 53 RNMVGAGEVDEDLEVETKEECE-KCGKVGKCVIFEIP 88
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 18/24 (75%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEEC 28
+L NMVG GEVD DLE E KEEC
Sbjct: 50 VLLRNMVGAGEVDEDLEVETKEEC 73
>gi|350646433|emb|CCD58930.1| fuse-binding protein-interacting repressor siahbp1, putative
[Schistosoma mansoni]
Length = 522
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
ENMVG EVD +L+ EV +EC YG V+RV+IH
Sbjct: 437 ENMVGVNEVDDELQEEVMEECGN-YGSVLRVLIH 469
>gi|344236629|gb|EGV92732.1| Poly(U)-binding-splicing factor PUF60 [Cricetulus griseus]
Length = 253
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 152 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 194
>gi|76155513|gb|AAX26804.2| SJCHGC01849 protein [Schistosoma japonicum]
Length = 239
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
ENMVG EVD +L+ EV +EC YG V+RV+IH
Sbjct: 154 ENMVGVNEVDDELQEEVMEECG-NYGSVLRVLIH 186
>gi|126323028|ref|XP_001370705.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Monodelphis
domestica]
Length = 637
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 536 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 578
>gi|432095092|gb|ELK26479.1| Splicing factor 45 [Myotis davidii]
Length = 96
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG GEVD DLE E K+EC K G+V + +I E+P
Sbjct: 54 NMVGAGEVDEDLEVETKEECE-KCGKVGKCVIFEIP 88
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 18/24 (75%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEEC 28
+L NMVG GEVD DLE E KEEC
Sbjct: 50 VLLRNMVGAGEVDEDLEVETKEEC 73
>gi|449495396|ref|XP_002188522.2| PREDICTED: poly(U)-binding-splicing factor PUF60 [Taeniopygia
guttata]
Length = 514
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 413 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 455
>gi|355698276|gb|EHH28824.1| 60 kDa poly(U)-binding-splicing factor [Macaca mulatta]
Length = 568
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 467 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 509
>gi|301773444|ref|XP_002922145.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60-like [Ailuropoda melanoleuca]
Length = 577
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 476 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 518
>gi|281341440|gb|EFB17024.1| hypothetical protein PANDA_011097 [Ailuropoda melanoleuca]
Length = 512
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 411 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 453
>gi|444722723|gb|ELW63400.1| Poly(U)-binding-splicing factor PUF60 [Tupaia chinensis]
Length = 577
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 476 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 518
>gi|388579958|gb|EIM20277.1| hypothetical protein WALSEDRAFT_61086 [Wallemia sebi CBS 633.66]
Length = 432
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 3 ATILDLNMVGPGEVDSDLEPEVKEECNTKYGE--------NMVGPGEVDSDLEPEVKDEC 54
A L+ + G GE+ S E + E YGE NMV EVD++L E+ +EC
Sbjct: 303 ALTLERSESGAGEIISKEEARLDREARDLYGEPSKTIILRNMVSIDEVDNELSQEIAEEC 362
Query: 55 NTKYGEVVRVIIH 67
N K G V RV+IH
Sbjct: 363 N-KNGIVERVVIH 374
>gi|332022211|gb|EGI62526.1| Poly(U)-binding-splicing factor half pint [Acromyrmex echinatior]
Length = 609
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMV P +VD L+ E++DEC +K+G VVRVII++
Sbjct: 517 NMVAPEDVDETLQEEIQDEC-SKFGVVVRVIIYK 549
>gi|157105905|ref|XP_001649078.1| fuse-binding protein-interacting repressor siahbp1 [Aedes aegypti]
gi|108879987|gb|EAT44212.1| AAEL004415-PA [Aedes aegypti]
Length = 672
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGP +VD L+ E++DEC KYG V RVII++
Sbjct: 576 NMVGPEDVDETLQDEIQDECG-KYGIVERVIIYK 608
>gi|426235336|ref|XP_004011640.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60 [Ovis aries]
Length = 506
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 405 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 447
>gi|402794180|ref|NP_001258028.1| poly(U)-binding-splicing factor PUF60 isoform g [Homo sapiens]
gi|426360971|ref|XP_004047701.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Gorilla
gorilla gorilla]
gi|441648312|ref|XP_003280819.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Nomascus leucogenys]
Length = 530
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 429 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 471
>gi|338728499|ref|XP_003365686.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 2
[Equus caballus]
Length = 516
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 415 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 457
>gi|296480748|tpg|DAA22863.1| TPA: poly(U)-binding-splicing factor PUF60 [Bos taurus]
Length = 530
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 429 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 471
>gi|403302944|ref|XP_003942108.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 509
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 408 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 450
>gi|359321052|ref|XP_848710.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Canis
lupus familiaris]
Length = 560
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 459 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 501
>gi|354491098|ref|XP_003507693.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Cricetulus
griseus]
Length = 582
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 481 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 523
>gi|326918217|ref|XP_003205387.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Meleagris
gallopavo]
Length = 516
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 415 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 457
>gi|403302946|ref|XP_003942109.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 492
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 391 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 433
>gi|440911935|gb|ELR61552.1| Poly(U)-binding-splicing factor PUF60, partial [Bos grunniens
mutus]
Length = 561
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 460 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 502
>gi|431908112|gb|ELK11715.1| Poly(U)-binding-splicing factor PUF60 [Pteropus alecto]
Length = 501
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 400 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 442
>gi|5524727|gb|AAD44358.1|AF165892_1 RNA-binding protein SiahBP [Rattus norvegicus]
Length = 565
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 464 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 506
>gi|410042304|ref|XP_003951412.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 530
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 429 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 471
>gi|395512680|ref|XP_003760563.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Sarcophilus
harrisii]
Length = 553
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 452 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 494
>gi|338728501|ref|XP_001496155.3| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 1
[Equus caballus]
Length = 499
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 398 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 440
>gi|324503561|gb|ADY41546.1| Poly(U)-binding-splicing factor half pint [Ascaris suum]
Length = 832
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTANV 75
+NMV E D +LE E++DEC TKYG+V V+I + PT +V
Sbjct: 746 KNMVTIEECDDELEGEIRDEC-TKYGQVEEVVIAQDPTNGSV 786
>gi|197100546|ref|NP_001127017.1| poly(U)-binding-splicing factor PUF60 [Pongo abelii]
gi|75040908|sp|Q5R469.1|PUF60_PONAB RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|55733539|emb|CAH93447.1| hypothetical protein [Pongo abelii]
Length = 558
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 457 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 499
>gi|207079925|ref|NP_001128734.1| DKFZP468L0227 protein [Pongo abelii]
gi|402794126|ref|NP_001258026.1| poly(U)-binding-splicing factor PUF60 isoform e [Homo sapiens]
gi|426360969|ref|XP_004047700.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Gorilla
gorilla gorilla]
gi|441648309|ref|XP_003280820.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2
[Nomascus leucogenys]
gi|55725023|emb|CAH89379.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 412 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 454
>gi|209862867|ref|NP_001129505.1| poly(U)-binding-splicing factor PUF60 isoform c [Homo sapiens]
gi|109087696|ref|XP_001087604.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 3 [Macaca
mulatta]
gi|441648305|ref|XP_004090875.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|15030041|gb|AAH11265.1| PUF60 protein [Homo sapiens]
gi|15080471|gb|AAH11979.1| PUF60 protein [Homo sapiens]
gi|119602595|gb|EAW82189.1| fuse-binding protein-interacting repressor, isoform CRA_f [Homo
sapiens]
Length = 516
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 415 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 457
>gi|114051121|ref|NP_001039598.1| poly(U)-binding-splicing factor PUF60 [Bos taurus]
gi|122144872|sp|Q2HJG2.1|PUF60_BOVIN RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|88682957|gb|AAI05448.1| Poly-U binding splicing factor 60KDa [Bos taurus]
Length = 530
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 429 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 471
>gi|410042302|ref|XP_003951411.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 513
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 412 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 454
>gi|298706682|emb|CBJ29611.1| DNA-damage repair protein drt111, putative [Ectocarpus siliculosus]
Length = 482
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
+NMVGPGEVD +LE E EC ++G V R +I+E+
Sbjct: 370 KNMVGPGEVDDELEGETSGECE-RFGPVRRCLIYEI 404
>gi|410042300|ref|XP_003951410.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 516
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 415 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 457
>gi|410987958|ref|XP_004000259.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Felis catus]
Length = 502
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 401 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 443
>gi|395860112|ref|XP_003802359.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Otolemur garnettii]
Length = 558
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 457 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 499
>gi|390475872|ref|XP_002759200.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Callithrix jacchus]
Length = 563
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 462 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 504
>gi|402794208|ref|NP_001258029.1| poly(U)-binding-splicing factor PUF60 isoform h [Homo sapiens]
gi|109087698|ref|XP_001087484.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Macaca
mulatta]
gi|332263566|ref|XP_003280822.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 4
[Nomascus leucogenys]
gi|16307289|gb|AAH09734.1| PUF60 protein [Homo sapiens]
gi|119602596|gb|EAW82190.1| fuse-binding protein-interacting repressor, isoform CRA_g [Homo
sapiens]
gi|261859062|dbj|BAI46053.1| poly-U binding splicing factor 60KDa [synthetic construct]
Length = 499
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 398 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 440
>gi|74203983|dbj|BAE28998.1| unnamed protein product [Mus musculus]
Length = 564
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 463 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 505
>gi|332831342|ref|XP_528257.3| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Pan
troglodytes]
Length = 559
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 458 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 500
>gi|327290985|ref|XP_003230202.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Anolis
carolinensis]
Length = 541
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 440 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 482
>gi|297300233|ref|XP_001087975.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 6 [Macaca
mulatta]
Length = 559
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 458 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 500
>gi|402794155|ref|NP_001258027.1| poly(U)-binding-splicing factor PUF60 isoform f [Homo sapiens]
gi|119602601|gb|EAW82195.1| fuse-binding protein-interacting repressor, isoform CRA_l [Homo
sapiens]
Length = 558
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 457 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 499
>gi|257196186|ref|NP_001158072.1| poly(U)-binding-splicing factor PUF60 isoform c [Mus musculus]
gi|14714891|gb|AAH10601.1| Puf60 protein [Mus musculus]
Length = 499
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 398 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 440
>gi|73974710|ref|XP_857040.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 6 [Canis
lupus familiaris]
Length = 543
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 442 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 484
>gi|417402731|gb|JAA48201.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Desmodus rotundus]
Length = 558
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 457 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 499
>gi|410042306|ref|XP_003951413.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 499
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 398 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 440
>gi|395860114|ref|XP_003802360.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2
[Otolemur garnettii]
Length = 542
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 441 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 483
>gi|380810662|gb|AFE77206.1| poly(U)-binding-splicing factor PUF60 isoform a [Macaca mulatta]
gi|383416607|gb|AFH31517.1| poly(U)-binding-splicing factor PUF60 isoform a [Macaca mulatta]
Length = 560
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 459 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 501
>gi|6176532|gb|AAF05605.1|AF190744_1 poly-U binding splicing factor PUF60 [Homo sapiens]
Length = 556
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 455 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 497
>gi|17978512|ref|NP_510965.1| poly(U)-binding-splicing factor PUF60 isoform a [Homo sapiens]
gi|397497388|ref|XP_003819493.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Pan
paniscus]
gi|402879352|ref|XP_003903307.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Papio
anubis]
gi|441648299|ref|XP_004090873.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|74761960|sp|Q9UHX1.1|PUF60_HUMAN RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor; AltName:
Full=FUSE-binding protein-interacting repressor;
Short=FBP-interacting repressor; AltName:
Full=Ro-binding protein 1; Short=RoBP1; AltName:
Full=Siah-binding protein 1; Short=Siah-BP1
gi|6684440|gb|AAF23589.1|AF114818_1 Ro ribonucleoprotein-binding protein 1 [Homo sapiens]
gi|48146403|emb|CAG33424.1| SIAHBP1 [Homo sapiens]
gi|119602593|gb|EAW82187.1| fuse-binding protein-interacting repressor, isoform CRA_d [Homo
sapiens]
gi|158258178|dbj|BAF85062.1| unnamed protein product [Homo sapiens]
gi|410220384|gb|JAA07411.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
gi|410303418|gb|JAA30309.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
Length = 559
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 458 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 500
>gi|1809248|gb|AAB41656.1| siah binding protein 1 [Homo sapiens]
Length = 541
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 440 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 482
>gi|417402525|gb|JAA48108.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Desmodus rotundus]
Length = 541
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 440 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 482
>gi|351698432|gb|EHB01351.1| Poly(U)-binding-splicing factor PUF60, partial [Heterocephalus
glaber]
Length = 556
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 455 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 497
>gi|322785180|gb|EFZ11893.1| hypothetical protein SINV_08068 [Solenopsis invicta]
Length = 545
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMV P +VD L+ E++DEC +K+G VVRVII++
Sbjct: 453 NMVAPEDVDETLQEEIQDEC-SKFGVVVRVIIYK 485
>gi|380810660|gb|AFE77205.1| poly(U)-binding-splicing factor PUF60 isoform b [Macaca mulatta]
gi|383416605|gb|AFH31516.1| poly(U)-binding-splicing factor PUF60 isoform b [Macaca mulatta]
Length = 543
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 442 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 484
>gi|17298690|ref|NP_055096.2| poly(U)-binding-splicing factor PUF60 isoform b [Homo sapiens]
gi|397497390|ref|XP_003819494.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Pan
paniscus]
gi|402879354|ref|XP_003903308.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Papio
anubis]
gi|441648302|ref|XP_004090874.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|17152040|gb|AAF27522.2|AF217197_1 FBP-interacting repressor [Homo sapiens]
gi|14250810|gb|AAH08875.1| Poly-U binding splicing factor 60KDa [Homo sapiens]
gi|119602594|gb|EAW82188.1| fuse-binding protein-interacting repressor, isoform CRA_e [Homo
sapiens]
gi|410220382|gb|JAA07410.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
gi|410303416|gb|JAA30308.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
Length = 542
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 441 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 483
>gi|257196183|ref|NP_082640.2| poly(U)-binding-splicing factor PUF60 isoform a [Mus musculus]
gi|158563798|sp|Q3UEB3.2|PUF60_MOUSE RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|158563997|sp|Q9WV25.2|PUF60_RAT RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor; AltName:
Full=RNA-binding protein Siah-BP; AltName:
Full=Siah-binding protein 1
gi|148697573|gb|EDL29520.1| RIKEN cDNA 2410104I19, isoform CRA_a [Mus musculus]
gi|149066142|gb|EDM16015.1| siah binding protein 1; FBP interacting repressor; pyrimidine tract
binding splicing factor; Ro ribonucleoprotein-binding
protein 1, isoform CRA_a [Rattus norvegicus]
Length = 564
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 463 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 505
>gi|297300235|ref|XP_001087851.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 5 [Macaca
mulatta]
Length = 542
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 441 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 483
>gi|402794118|ref|NP_001258025.1| poly(U)-binding-splicing factor PUF60 isoform d [Homo sapiens]
gi|119602600|gb|EAW82194.1| fuse-binding protein-interacting repressor, isoform CRA_k [Homo
sapiens]
Length = 541
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 440 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 482
>gi|332831344|ref|XP_003312009.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Pan
troglodytes]
Length = 542
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 441 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 483
>gi|300798352|ref|NP_001178809.1| poly(U)-binding-splicing factor PUF60 [Rattus norvegicus]
Length = 563
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 462 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 504
>gi|148697575|gb|EDL29522.1| RIKEN cDNA 2410104I19, isoform CRA_c [Mus musculus]
Length = 546
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 445 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 487
>gi|76677895|ref|NP_598452.2| poly(U)-binding-splicing factor PUF60 isoform b [Mus musculus]
gi|74195824|dbj|BAE30474.1| unnamed protein product [Mus musculus]
gi|74221976|dbj|BAE40622.1| unnamed protein product [Mus musculus]
gi|148697574|gb|EDL29521.1| RIKEN cDNA 2410104I19, isoform CRA_b [Mus musculus]
gi|149066143|gb|EDM16016.1| siah binding protein 1; FBP interacting repressor; pyrimidine tract
binding splicing factor; Ro ribonucleoprotein-binding
protein 1, isoform CRA_b [Rattus norvegicus]
Length = 547
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 446 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 488
>gi|19224321|gb|AAL86452.1|AF479079_1 half pint [Drosophila melanogaster]
Length = 637
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTANVA 76
NMVGP +VD L+ E+++EC +K+G V RVII T N A
Sbjct: 543 NMVGPEDVDETLQEEIQEEC-SKFGTVSRVIIFNEKQTENEA 583
>gi|242021379|ref|XP_002431122.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
gi|212516371|gb|EEB18384.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
Length = 571
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMV P EVD L+ E++DEC +KYG V RVII+ + N
Sbjct: 480 NMVEPQEVDETLQEEIQDEC-SKYGVVERVIIYNEKQSDN 518
>gi|195135155|ref|XP_002012000.1| GI16722 [Drosophila mojavensis]
gi|193918264|gb|EDW17131.1| GI16722 [Drosophila mojavensis]
Length = 616
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGP +VD L+ E+++EC +K+G V RVII T N
Sbjct: 522 NMVGPDDVDETLQEEIQEEC-SKFGTVSRVIIFNEKQTEN 560
>gi|148697576|gb|EDL29523.1| RIKEN cDNA 2410104I19, isoform CRA_d [Mus musculus]
Length = 553
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 452 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 494
>gi|187607191|ref|NP_001120082.1| poly-U binding splicing factor 60KDa [Xenopus (Silurana)
tropicalis]
gi|165971204|gb|AAI58522.1| LOC100145091 protein [Xenopus (Silurana) tropicalis]
Length = 507
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 406 KQESTVMVLRNMVDPRDIDDDLEGEVTEECG-KFGAVNRVIIYQ 448
>gi|195375406|ref|XP_002046492.1| GJ12466 [Drosophila virilis]
gi|194153650|gb|EDW68834.1| GJ12466 [Drosophila virilis]
Length = 645
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGP +VD L+ E+++EC +K+G V RVII T N
Sbjct: 551 NMVGPDDVDETLQEEIQEEC-SKFGTVSRVIIFNEKQTEN 589
>gi|358339509|dbj|GAA27913.2| poly(U)-binding-splicing factor PUF60-B [Clonorchis sinensis]
Length = 512
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
ENMV EVD+DLE EV +EC + +G V+RV +H
Sbjct: 429 ENMVSAEEVDADLEGEVAEEC-SNFGHVLRVFVH 461
>gi|67772135|gb|AAY79320.1| RNA-binding protein SiahBP [Siniperca chuatsi]
Length = 118
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K E NMVGP ++D DLE EV +EC K+G V RVII++
Sbjct: 30 KSESTVMVLRNMVGPEDIDDDLEGEVAEECG-KFGCVNRVIIYQ 72
>gi|321479211|gb|EFX90167.1| hypothetical protein DAPPUDRAFT_300177 [Daphnia pulex]
Length = 612
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGP +VD L+ E+ DEC +K+G V RVII++
Sbjct: 521 NMVGPEDVDETLQEEITDEC-SKFGNVERVIIYK 553
>gi|194747299|ref|XP_001956090.1| GF25032 [Drosophila ananassae]
gi|190623372|gb|EDV38896.1| GF25032 [Drosophila ananassae]
Length = 643
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGP +VD L+ E+++EC +K+G V RVII T N
Sbjct: 549 NMVGPEDVDETLQEEIQEEC-SKFGTVSRVIIFNEKQTEN 587
>gi|384249327|gb|EIE22809.1| splicing factor [Coccomyxa subellipsoidea C-169]
Length = 281
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
NMVGPGEVD +LE E+ EC +K+G V V+I E+
Sbjct: 182 NMVGPGEVDEELEDEIGLEC-SKFGNVQSVMIFEV 215
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYG 33
+L NMVGPGEVD +LE E+ EC +K+G
Sbjct: 178 VLLRNMVGPGEVDEELEDEIGLEC-SKFG 205
>gi|194864858|ref|XP_001971142.1| GG14596 [Drosophila erecta]
gi|190652925|gb|EDV50168.1| GG14596 [Drosophila erecta]
Length = 731
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGP +VD L+ E+++EC +K+G V RVII T N
Sbjct: 637 NMVGPEDVDETLQEEIQEEC-SKFGTVSRVIIFNEKQTEN 675
>gi|195427509|ref|XP_002061819.1| GK17204 [Drosophila willistoni]
gi|194157904|gb|EDW72805.1| GK17204 [Drosophila willistoni]
Length = 631
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGP +VD L+ E+++EC +K+G V RVII T N
Sbjct: 537 NMVGPEDVDETLQEEIQEEC-SKFGTVSRVIIFNEKQTEN 575
>gi|195490418|ref|XP_002093131.1| GE20955 [Drosophila yakuba]
gi|194179232|gb|EDW92843.1| GE20955 [Drosophila yakuba]
Length = 637
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGP +VD L+ E+++EC +K+G V RVII T N
Sbjct: 543 NMVGPEDVDETLQEEIQEEC-SKFGTVSRVIIFNEKQTEN 581
>gi|195336594|ref|XP_002034920.1| GM14211 [Drosophila sechellia]
gi|194128013|gb|EDW50056.1| GM14211 [Drosophila sechellia]
Length = 616
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGP +VD L+ E+++EC +K+G V RVII T N
Sbjct: 522 NMVGPEDVDETLQEEIQEEC-SKFGTVSRVIIFNEKQTEN 560
>gi|6118522|gb|AAF04132.1|AF190745_1 poly-U binding splicing factor [Drosophila melanogaster]
Length = 637
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGP +VD L+ E+++EC +K+G V RVII T N
Sbjct: 543 NMVGPEDVDETLQEEIQEEC-SKFGTVSRVIIFNEKQTEN 581
>gi|24655228|ref|NP_525123.2| poly U binding factor 68kD, isoform A [Drosophila melanogaster]
gi|41688713|sp|Q8T6B9.2|PUF68_DROME RecName: Full=Poly(U)-binding-splicing factor half pint;
Short=Protein half pint; AltName: Full=68 kDa
poly(U)-binding-splicing factor; AltName: Full=PUF60
homolog
gi|7292088|gb|AAF47501.1| poly U binding factor 68kD, isoform A [Drosophila melanogaster]
Length = 637
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGP +VD L+ E+++EC +K+G V RVII T N
Sbjct: 543 NMVGPEDVDETLQEEIQEEC-SKFGTVSRVIIFNEKQTEN 581
>gi|195167652|ref|XP_002024647.1| GL22585 [Drosophila persimilis]
gi|198467049|ref|XP_001354234.2| GA11385 [Drosophila pseudoobscura pseudoobscura]
gi|194108052|gb|EDW30095.1| GL22585 [Drosophila persimilis]
gi|198149485|gb|EAL31287.2| GA11385 [Drosophila pseudoobscura pseudoobscura]
Length = 653
Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGP +VD L+ E+++EC +K+G V RVII T N
Sbjct: 559 NMVGPEDVDETLQEEIQEEC-SKFGTVSRVIIFNEKQTEN 597
>gi|159164265|pdb|2DNY|A Chain A, Solution Structure Of The Third Rna Binding Domain Of
Fbp- Interacting Repressor, Siahbp1
Length = 119
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 12 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 54
>gi|24655233|ref|NP_728610.1| poly U binding factor 68kD, isoform B [Drosophila melanogaster]
gi|24655237|ref|NP_728611.1| poly U binding factor 68kD, isoform C [Drosophila melanogaster]
gi|24655242|ref|NP_728612.1| poly U binding factor 68kD, isoform D [Drosophila melanogaster]
gi|281365434|ref|NP_001163315.1| poly U binding factor 68kD, isoform E [Drosophila melanogaster]
gi|281365436|ref|NP_001163316.1| poly U binding factor 68kD, isoform F [Drosophila melanogaster]
gi|281365438|ref|NP_001163317.1| poly U binding factor 68kD, isoform G [Drosophila melanogaster]
gi|281365440|ref|NP_001163318.1| poly U binding factor 68kD, isoform H [Drosophila melanogaster]
gi|281365442|ref|NP_001163319.1| poly U binding factor 68kD, isoform I [Drosophila melanogaster]
gi|281365444|ref|NP_001163320.1| poly U binding factor 68kD, isoform J [Drosophila melanogaster]
gi|7292089|gb|AAF47502.1| poly U binding factor 68kD, isoform C [Drosophila melanogaster]
gi|10727221|gb|AAG22221.1| poly U binding factor 68kD, isoform B [Drosophila melanogaster]
gi|16768670|gb|AAL28554.1| HL02140p [Drosophila melanogaster]
gi|23092776|gb|AAG22222.2| poly U binding factor 68kD, isoform D [Drosophila melanogaster]
gi|27820105|gb|AAO25077.1| GH01086p [Drosophila melanogaster]
gi|220953270|gb|ACL89178.1| pUf68-PB [synthetic construct]
gi|272454997|gb|ACZ94587.1| poly U binding factor 68kD, isoform E [Drosophila melanogaster]
gi|272454998|gb|ACZ94588.1| poly U binding factor 68kD, isoform F [Drosophila melanogaster]
gi|272454999|gb|ACZ94589.1| poly U binding factor 68kD, isoform G [Drosophila melanogaster]
gi|272455000|gb|ACZ94590.1| poly U binding factor 68kD, isoform H [Drosophila melanogaster]
gi|272455001|gb|ACZ94591.1| poly U binding factor 68kD, isoform I [Drosophila melanogaster]
gi|272455002|gb|ACZ94592.1| poly U binding factor 68kD, isoform J [Drosophila melanogaster]
Length = 545
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGP +VD L+ E+++EC +K+G V RVII T N
Sbjct: 451 NMVGPEDVDETLQEEIQEEC-SKFGTVSRVIIFNEKQTEN 489
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGP +VD L+ E+++EC KYG V RVII++
Sbjct: 565 NMVGPEDVDETLQDEIQEECG-KYGLVERVIIYK 597
>gi|195014784|ref|XP_001984080.1| GH15204 [Drosophila grimshawi]
gi|193897562|gb|EDV96428.1| GH15204 [Drosophila grimshawi]
Length = 643
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTAN 74
NMVGP +VD L+ E+++EC +K+G V RVII T N
Sbjct: 549 NMVGPDDVDETLQEEIQEEC-SKFGIVSRVIIFNEKQTEN 587
>gi|355714557|gb|AES05043.1| poly-U binding splicing factor 60KDa [Mustela putorius furo]
Length = 230
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 130 KQESTVMVLRNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 172
>gi|156398787|ref|XP_001638369.1| predicted protein [Nematostella vectensis]
gi|156225489|gb|EDO46306.1| predicted protein [Nematostella vectensis]
Length = 504
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K E NMVG ++D DLE EV DEC +K+G V RV+I++
Sbjct: 403 KSESKVMVLRNMVGVEDLDEDLEHEVTDEC-SKFGTVSRVVIYK 445
>gi|325188176|emb|CCA22716.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 401
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
+NMV P EVD L EVK+EC+ KYG V II+++
Sbjct: 313 QNMVTPDEVDDHLGSEVKEECSQKYGPVRNCIIYKV 348
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 19/29 (65%), Positives = 20/29 (68%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYG 33
IL NMV P EVD L EVKEEC+ KYG
Sbjct: 310 ILLQNMVTPDEVDDHLGSEVKEECSQKYG 338
>gi|198416925|ref|XP_002124386.1| PREDICTED: similar to poly-U binding splicing factor 60 [Ciona
intestinalis]
Length = 511
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
KEE NMV ++D DLE EV +EC K+G V RV+I++
Sbjct: 410 KEESQVMVMRNMVTVEDLDEDLEAEVTEECG-KFGSVERVVIYQ 452
>gi|210060966|pdb|3DXB|A Chain A, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060967|pdb|3DXB|B Chain B, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060968|pdb|3DXB|C Chain C, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060969|pdb|3DXB|D Chain D, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060970|pdb|3DXB|E Chain E, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060971|pdb|3DXB|F Chain F, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060972|pdb|3DXB|G Chain G, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060973|pdb|3DXB|H Chain H, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
Length = 222
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMV P ++D DLE EV +EC K+G V RVII++
Sbjct: 130 RNMVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 163
>gi|270001539|gb|EEZ97986.1| hypothetical protein TcasGA2_TC000381 [Tribolium castaneum]
Length = 591
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
NMVGP +VD L+ E+++EC +K+G V RVII+
Sbjct: 499 NMVGPEDVDETLQEEIQEEC-SKFGTVERVIIY 530
>gi|312086552|ref|XP_003145121.1| Poly(U)-binding-splicing factor half pint [Loa loa]
gi|393909311|gb|EJD75402.1| Poly(U)-binding-splicing factor half pint, variant [Loa loa]
Length = 765
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTANV 75
NMV E D +LE E++DECN KYG+V V+I + P +V
Sbjct: 680 NMVTIEECDDELEGEIRDECN-KYGKVQEVVIAQDPANGSV 719
>gi|393909310|gb|EFO18950.2| Poly(U)-binding-splicing factor half pint [Loa loa]
Length = 769
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTANV 75
NMV E D +LE E++DECN KYG+V V+I + P +V
Sbjct: 684 NMVTIEECDDELEGEIRDECN-KYGKVQEVVIAQDPANGSV 723
>gi|353229125|emb|CCD75296.1| putative fuse-binding protein-interacting repressor siahbp1
[Schistosoma mansoni]
Length = 520
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGP + D +LE EV EC +KYG V +V+IH+
Sbjct: 431 NMVGPEDCDDELEGEVAGEC-SKYGLVEKVLIHQ 463
>gi|256072869|ref|XP_002572756.1| fuse-binding protein-interacting repressor siahbp1 [Schistosoma
mansoni]
Length = 520
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGP + D +LE EV EC +KYG V +V+IH+
Sbjct: 431 NMVGPEDCDDELEGEVAGEC-SKYGLVEKVLIHQ 463
>gi|170581558|ref|XP_001895732.1| RNA binding protein [Brugia malayi]
gi|158597207|gb|EDP35417.1| RNA binding protein, putative [Brugia malayi]
Length = 275
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTANV 75
+NMV E D +LE E++DECN KYG+V V+I + P +V
Sbjct: 189 KNMVTIEECDDELEGEIRDECN-KYGKVQEVVIAQDPANGSV 229
>gi|429243189|ref|NP_594422.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|380865416|sp|O13845.2|RSD1_SCHPO RecName: Full=RNA-binding protein rsd1
gi|347834186|emb|CAB10118.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe]
Length = 603
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
Query: 18 SDLEPEVKEECNTKYGENMVGPGEVDS-----DLEPEVKDECNTKYGEVVRVII 66
S+ EP ++ C ENM P E S +LE +VK+EC+ KYG+VV + +
Sbjct: 497 SEPEPPIRSRCALL--ENMFNPAEETSPNWVQELEQDVKEECDEKYGKVVHIAV 548
>gi|301101828|ref|XP_002900002.1| Poly(U)-binding-splicing factor PUF60, putative [Phytophthora
infestans T30-4]
gi|262102577|gb|EEY60629.1| Poly(U)-binding-splicing factor PUF60, putative [Phytophthora
infestans T30-4]
Length = 444
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHEL 69
N+V GEVD +LE EV+ EC K+G V +V IHEL
Sbjct: 358 NLVNCGEVDDELEDEVRGECG-KFGSVNKVDIHEL 391
>gi|449667931|ref|XP_002156035.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Hydra
magnipapillata]
Length = 597
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
+NMV EVD +L+ EV +EC +++G+VVRV+I++
Sbjct: 505 KNMVTSDEVDEELQTEVTEEC-SRFGDVVRVVIYQ 538
>gi|307195017|gb|EFN77085.1| Poly(U)-binding-splicing factor half pint [Harpegnathos saltator]
Length = 561
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
NMV P +VD L+ E++DEC +K+G V RVII+
Sbjct: 469 NMVAPEDVDESLQEEIQDEC-SKFGVVERVIIY 500
>gi|402587582|gb|EJW81517.1| hypothetical protein WUBG_07571 [Wuchereria bancrofti]
Length = 493
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTANV 75
NMV E D +LE E++DECN KYG+V V+I + P +V
Sbjct: 408 NMVTIEECDDELEGEIRDECN-KYGKVQEVVIAQDPANGSV 447
>gi|307177474|gb|EFN66601.1| Poly(U)-binding-splicing factor half pint [Camponotus floridanus]
Length = 510
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMV P +VD L+ E++DEC +K+G V RVII++
Sbjct: 418 NMVAPEDVDETLQEEIQDEC-SKFGVVERVIIYK 450
>gi|440793928|gb|ELR15099.1| hypothetical protein ACA1_215710 [Acanthamoeba castellanii str.
Neff]
Length = 98
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 36 MVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
MVGPG++D L+ EV+ E KYG V RV+IH+
Sbjct: 1 MVGPGDLDDYLKAEVETEA-AKYGHVERVVIHQ 32
>gi|313245661|emb|CBY40324.1| unnamed protein product [Oikopleura dioica]
Length = 445
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
ENMV P E+D +L E+ EC KYG V V I E+P
Sbjct: 353 ENMVDPEEIDGELSGEISGEC-AKYGTVANVKIAEVP 388
>gi|328783360|ref|XP_001121000.2| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
mellifera]
Length = 592
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
NMV P +VD L+ E++DEC +K+G V RVII+
Sbjct: 500 NMVAPEDVDESLQEEIQDEC-SKFGVVERVIIY 531
>gi|380016392|ref|XP_003692169.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
florea]
Length = 592
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
NMV P +VD L+ E++DEC +K+G V RVII+
Sbjct: 500 NMVAPEDVDESLQEEIQDEC-SKFGVVERVIIY 531
>gi|383861059|ref|XP_003706004.1| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Megachile rotundata]
Length = 592
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
NMV P +VD L+ E++DEC +K+G V RVII+
Sbjct: 500 NMVAPEDVDESLQEEIQDEC-SKFGVVERVIIY 531
>gi|340725363|ref|XP_003401040.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
terrestris]
gi|350403872|ref|XP_003486932.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
impatiens]
Length = 592
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
NMV P +VD L+ E++DEC +K+G V RVII+
Sbjct: 500 NMVAPEDVDESLQEEIQDEC-SKFGVVERVIIY 531
>gi|189234753|ref|XP_974490.2| PREDICTED: similar to STE20-like kinase (yeast) [Tribolium
castaneum]
Length = 1819
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
NMVGP +VD L+ E+++EC +K+G V RVII+
Sbjct: 456 NMVGPEDVDETLQEEIQEEC-SKFGTVERVIIY 487
>gi|440789699|gb|ELR11001.1| hypothetical protein ACA1_354490 [Acanthamoeba castellanii str.
Neff]
Length = 88
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 36 MVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
MVGPG++D L+ EV+ E KYG V RV+IH+
Sbjct: 1 MVGPGDLDDYLKAEVETEA-AKYGHVERVVIHQ 32
>gi|345484300|ref|XP_003424998.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
half pint-like [Nasonia vitripennis]
Length = 605
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
NMV P +VD L+ E++DEC +K+G V RVII+
Sbjct: 513 NMVAPEDVDQTLQEEIQDEC-SKFGVVERVIIY 544
>gi|358439934|pdb|3UE2|A Chain A, Crystal Structure Of A Rna Binding Domain Of Poly-U
Binding Splicing Factor 60kda (Puf60) From Homo Sapiens
At 1.23 A Resolution
gi|371927677|pdb|3US5|A Chain A, Crystal Structure Of A Rna-Binding Domain Of A Poly-U
Binding Splicing Factor 60kda (Puf60) From Homo Sapiens
At 1.38 A Resolution
Length = 118
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K+E N V P ++D DLE EV +EC K+G V RVII++
Sbjct: 17 KQESTVXVLRNXVDPKDIDDDLEGEVTEECG-KFGAVNRVIIYQ 59
>gi|196009954|ref|XP_002114842.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
gi|190582904|gb|EDV22976.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
Length = 620
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
+NMV ++D DLE EV +EC +KYG V RVII++
Sbjct: 528 KNMVSVEDIDEDLETEVTEEC-SKYGTVKRVIIYQ 561
>gi|328696967|ref|XP_001951881.2| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Acyrthosiphon pisum]
Length = 603
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVG +VD L+ E++DEC +K+G V RVII++
Sbjct: 510 NMVGVEDVDDSLQEEIQDEC-SKFGVVERVIIYK 542
>gi|67624203|ref|XP_668384.1| RNA-binding protein SiahBP [Cryptosporidium hominis TU502]
gi|54659576|gb|EAL38146.1| RNA-binding protein SiahBP [Cryptosporidium hominis]
Length = 615
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRV 64
IL NMVGP E+D +L+ EVK EC +KYG+ D+ V + + V
Sbjct: 522 ILLTNMVGPDEIDDELKEEVKIEC-SKYGKVY--------DVRIHVSNNISKPSDRVRIF 572
Query: 65 IIHELPTTANVA 76
++ E P+ A +A
Sbjct: 573 VVFESPSMAQIA 584
>gi|429329604|gb|AFZ81363.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 494
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 11 VGPGEVDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
+ +V + P E N NMV P VD +L EVK+EC +KYG V V +H
Sbjct: 386 IAGAKVQVTMAPSSLEPSNVIVLCNMVDPKLVDEELPNEVKEEC-SKYGTVTSVYLH 441
>gi|402225414|gb|EJU05475.1| hypothetical protein DACRYDRAFT_113580 [Dacryopinax sp. DJM-731
SS1]
Length = 649
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
NMVG +VD+DL+ E+ +EC +K+G V RV IH P
Sbjct: 557 NMVGKEDVDADLQGEIAEEC-SKHGVVERVYIHVAP 591
>gi|297741295|emb|CBI32426.3| unnamed protein product [Vitis vinifera]
Length = 2003
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 11 VGPGEVDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKY 58
+GP V + L+PE K+E KY +GP V + L+PE K E KY
Sbjct: 1928 MGPAGVRNSLDPEHKKESMEKY----LGPAGVRNSLDPERKKESMEKY 1971
>gi|66362264|ref|XP_628096.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|46227417|gb|EAK88352.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|323508937|dbj|BAJ77361.1| cgd1_2730 [Cryptosporidium parvum]
gi|323510323|dbj|BAJ78055.1| cgd1_2730 [Cryptosporidium parvum]
Length = 693
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRV 64
IL NMVGP E+D +L+ EVK EC +KYG+ D+ V + + V
Sbjct: 600 ILLTNMVGPDEIDDELKEEVKIEC-SKYGKVY--------DVRIHVSNNISKPSDRVRIF 650
Query: 65 IIHELPTTANVA 76
++ E P+ A +A
Sbjct: 651 VVFESPSMAQIA 662
>gi|346468399|gb|AEO34044.1| hypothetical protein [Amblyomma maculatum]
Length = 577
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVG ++D +LE EV DEC ++G V RVII++
Sbjct: 486 NMVGVEDLDDELESEVTDECG-RFGTVKRVIIYQ 518
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
++M GP +VD +LE E+ DE TKYG V RV+I++
Sbjct: 604 KDMAGPEDVDDELEGEITDEA-TKYGIVERVVIYQ 637
>gi|427776743|gb|JAA53823.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Rhipicephalus pulchellus]
Length = 579
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVG ++D +LE EV DEC ++G V RVII++
Sbjct: 488 NMVGVEDLDDELESEVTDECG-RFGTVKRVIIYQ 520
>gi|241315296|ref|XP_002408027.1| RNA-binding protein, putative [Ixodes scapularis]
gi|215497243|gb|EEC06737.1| RNA-binding protein, putative [Ixodes scapularis]
Length = 509
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVG ++D +LE EV DEC ++G V RVII++
Sbjct: 418 NMVGVEDLDDELESEVTDECG-RFGMVKRVIIYQ 450
>gi|198424504|ref|XP_002131946.1| PREDICTED: similar to poly-U binding splicing factor 60KDa [Ciona
intestinalis]
Length = 491
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMV E+D DLE EV +EC K+G V RV+I++
Sbjct: 399 HNMVDVEEIDDDLESEVTEECG-KFGSVSRVVIYQ 432
>gi|328704296|ref|XP_001948399.2| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Acyrthosiphon pisum]
Length = 572
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 25 KEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
K E +NM+G +VD +L+ E++DEC K+G V R+II++
Sbjct: 469 KTESKVVILKNMLGVEDVDDNLQEEIQDEC-CKFGVVKRIIIYK 511
>gi|340504188|gb|EGR30658.1| splicing factor 45, putative [Ichthyophthirius multifiliis]
Length = 191
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIH 67
NMV P E+D+DLE E+ +EC +G+V+ + I+
Sbjct: 99 NMVSPYEIDADLEQEITEEC-FNFGKVINLKIY 130
>gi|255087508|ref|XP_002505677.1| predicted protein [Micromonas sp. RCC299]
gi|226520947|gb|ACO66935.1| predicted protein [Micromonas sp. RCC299]
Length = 471
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 15/20 (75%), Positives = 16/20 (80%)
Query: 9 NMVGPGEVDSDLEPEVKEEC 28
N+ GPGEVD DLE EV EEC
Sbjct: 372 NLTGPGEVDGDLEDEVAEEC 391
>gi|344240816|gb|EGV96919.1| Splicing factor 45 [Cricetulus griseus]
Length = 104
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
+L NMVG G+VD DLE E KEEC KYG+
Sbjct: 69 VLLRNMVGVGKVDEDLEVETKEECE-KYGK 97
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEV 61
NMVG G+VD DLE E K+EC KYG+V
Sbjct: 73 NMVGVGKVDEDLEVETKEECE-KYGKV 98
>gi|224011335|ref|XP_002295442.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583473|gb|ACI64159.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 512
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVII 66
NMV PG++D +L EVK+EC + G+V+ V +
Sbjct: 434 NMVAPGDIDDELATEVKEECEEQCGKVLNVHV 465
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 4 TILDLNMVGPGEVDSDLEPEVKEECNTKYGE 34
T+ NMV PG++D +L EVKEEC + G+
Sbjct: 429 TVALFNMVAPGDIDDELATEVKEECEEQCGK 459
>gi|313244755|emb|CBY15469.1| unnamed protein product [Oikopleura dioica]
Length = 2588
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 34 ENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
+NM+ ++D ++E EV EC ++YG V+RV+I++
Sbjct: 2496 KNMLSADDLDEEVESEVTQEC-SQYGNVLRVVIYQ 2529
>gi|17510025|ref|NP_491176.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
gi|373220165|emb|CCD72565.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
Length = 749
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELPTTANV 75
NMV P ++D LE E+++EC KYG V+ V+I ++ V
Sbjct: 664 NMVTPQDIDEFLEGEIREECG-KYGNVIDVVIANFASSGLV 703
>gi|209881578|ref|XP_002142227.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557833|gb|EEA07878.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 533
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 5 ILDLNMVGPGEVDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRV 64
IL NM+GP EVD +L+ EVK EC +KYG+ D+ + D + V
Sbjct: 440 ILLTNMIGPEEVDDELKEEVKIEC-SKYGKVY--------DVRIHISDHVSKPSDRVRIF 490
Query: 65 IIHELPTTANVA 76
++ E T A +A
Sbjct: 491 VVFETNTMAQIA 502
>gi|328769065|gb|EGF79110.1| hypothetical protein BATDEDRAFT_90160 [Batrachochytrium
dendrobatidis JAM81]
Length = 330
Score = 34.7 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHELP 70
N+VG EVD +L E +EC K+G+V+ ++E+P
Sbjct: 240 NLVGKSEVDDELRRETTEEC-AKFGKVIECSVYEVP 274
>gi|443896055|dbj|GAC73399.1| transcriptional coactivator CAPER [Pseudozyma antarctica T-34]
Length = 662
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 34 ENMVGPGEV-----DSDLEPEVKDECNTKYGEVVRV 64
+NM P E D DL +VKDEC KYG V R+
Sbjct: 575 KNMFDPAEETEADWDKDLAEDVKDECQAKYGPVTRI 610
>gi|390345175|ref|XP_785572.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 2
[Strongylocentrotus purpuratus]
Length = 574
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 35 NMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVG ++D +LE EV +EC K+G V RV+I++
Sbjct: 483 NMVGVEDLDDELEGEVTEECG-KFGTVNRVVIYQ 515
>gi|358335955|dbj|GAA54545.1| poly(U)-binding-splicing factor PUF60 [Clonorchis sinensis]
Length = 511
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 27/60 (45%)
Query: 9 NMVGPGEVDSDLEPEVKEECNTKYGENMVGPGEVDSDLEPEVKDECNTKYGEVVRVIIHE 68
NMVGP + D +LE EVKEEC CN YG V RVII++
Sbjct: 423 NMVGPDDCDDELENEVKEEC-------------------------CN--YGSVDRVIIYQ 455
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,330,340,375
Number of Sequences: 23463169
Number of extensions: 52041150
Number of successful extensions: 86362
Number of sequences better than 100.0: 336
Number of HSP's better than 100.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 85836
Number of HSP's gapped (non-prelim): 662
length of query: 76
length of database: 8,064,228,071
effective HSP length: 47
effective length of query: 29
effective length of database: 6,961,459,128
effective search space: 201882314712
effective search space used: 201882314712
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 69 (31.2 bits)