Query psy18101
Match_columns 126
No_of_seqs 187 out of 1431
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 22:36:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18101.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18101hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2awg_A 38 kDa FK-506 binding p 99.9 5.8E-26 2E-30 152.5 11.4 95 28-122 3-98 (118)
2 2jwx_A FKBP38NTD, FK506-bindin 99.9 4.9E-25 1.7E-29 155.1 11.6 97 26-122 31-129 (157)
3 2d9f_A FK506-binding protein 8 99.9 2.4E-25 8.3E-30 152.9 7.9 97 24-120 3-100 (135)
4 1r9h_A FKB-6, FK506 binding pr 99.9 2E-24 6.8E-29 148.3 11.5 94 29-122 3-102 (135)
5 3kz7_A FK506-binding protein 3 99.9 2.7E-24 9.2E-29 144.2 10.7 86 37-122 3-99 (119)
6 3o5e_A Peptidyl-prolyl CIS-tra 99.9 3.5E-24 1.2E-28 148.5 11.3 96 28-123 23-124 (144)
7 3o5q_A Peptidyl-prolyl CIS-tra 99.9 1.3E-23 4.3E-28 143.0 11.7 93 31-123 10-108 (128)
8 2vn1_A 70 kDa peptidylprolyl i 99.9 2.5E-23 8.7E-28 141.5 11.9 97 27-123 5-108 (129)
9 2ppn_A FK506-binding protein 1 99.9 4.8E-23 1.6E-27 135.7 11.0 85 39-123 1-89 (107)
10 3b7x_A FK506-binding protein 6 99.9 6.8E-24 2.3E-28 145.5 7.1 99 24-123 12-115 (134)
11 2lkn_A AH receptor-interacting 99.9 3.4E-24 1.2E-28 151.9 4.0 83 35-117 7-96 (165)
12 1yat_A FK506 binding protein; 99.9 9.3E-23 3.2E-27 135.6 10.1 86 38-123 6-95 (113)
13 4dip_A Peptidyl-prolyl CIS-tra 99.9 3E-22 1E-26 135.4 10.5 88 35-122 9-104 (125)
14 2y78_A Peptidyl-prolyl CIS-tra 99.9 4.9E-22 1.7E-26 136.2 10.7 87 36-123 26-116 (133)
15 2lgo_A FKBP; infectious diseas 99.9 5.8E-22 2E-26 135.3 9.7 87 37-123 21-113 (130)
16 1q1c_A FK506-binding protein 4 99.9 1.2E-21 4.2E-26 148.8 12.2 95 29-123 40-140 (280)
17 3uf8_A Ubiquitin-like protein 99.9 3.2E-21 1.1E-25 141.2 11.0 87 36-123 102-192 (209)
18 2f4e_A ATFKBP42; FKBP-like, al 99.9 1.1E-20 3.7E-25 135.4 12.5 89 31-121 43-137 (180)
19 1jvw_A Macrophage infectivity 99.8 3.3E-21 1.1E-25 136.8 9.4 85 36-122 35-123 (167)
20 3oe2_A Peptidyl-prolyl CIS-tra 99.8 3.4E-21 1.2E-25 141.9 9.6 84 37-123 116-200 (219)
21 1u79_A FKBP-type peptidyl-prol 99.8 5.2E-21 1.8E-25 130.2 9.2 84 37-121 11-104 (129)
22 1fd9_A Protein (macrophage inf 99.8 1.9E-20 6.4E-25 137.5 10.9 84 36-122 104-191 (213)
23 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 4.2E-21 1.4E-25 152.8 7.3 96 28-123 19-120 (457)
24 3jxv_A 70 kDa peptidyl-prolyl 99.8 1.9E-20 6.6E-25 146.1 10.6 97 25-121 228-332 (356)
25 1q6h_A FKBP-type peptidyl-prol 99.8 5.7E-20 1.9E-24 135.8 10.1 83 37-122 120-206 (224)
26 3jxv_A 70 kDa peptidyl-prolyl 99.8 7.6E-20 2.6E-24 142.7 11.3 92 32-123 121-212 (356)
27 1q1c_A FK506-binding protein 4 99.8 5.8E-19 2E-23 134.1 10.6 85 36-122 166-253 (280)
28 2pbc_A FK506-binding protein 2 99.8 3.9E-19 1.3E-23 116.0 8.3 71 52-122 4-78 (102)
29 2if4_A ATFKBP42; FKBP-like, al 99.8 4.1E-19 1.4E-23 136.3 9.1 84 37-121 48-137 (338)
30 3pr9_A FKBP-type peptidyl-prol 99.7 2.5E-18 8.5E-23 120.8 7.6 67 54-121 2-85 (157)
31 1p5q_A FKBP52, FK506-binding p 99.7 9.4E-18 3.2E-22 128.5 11.5 91 30-122 17-110 (336)
32 4dt4_A FKBP-type 16 kDa peptid 99.7 6.8E-18 2.3E-22 119.9 8.4 68 53-120 24-95 (169)
33 1ix5_A FKBP; ppiase, isomerase 99.7 4.2E-18 1.4E-22 118.9 5.2 68 54-121 2-86 (151)
34 2kr7_A FKBP-type peptidyl-prol 99.7 3.5E-17 1.2E-21 114.2 8.8 70 52-121 5-78 (151)
35 3prb_A FKBP-type peptidyl-prol 99.7 3.2E-17 1.1E-21 121.5 8.3 66 54-120 2-84 (231)
36 2kfw_A FKBP-type peptidyl-prol 99.7 7.8E-17 2.7E-21 116.8 8.8 68 53-120 2-72 (196)
37 2k8i_A SLYD, peptidyl-prolyl C 99.7 8.3E-17 2.8E-21 114.5 8.7 67 54-120 3-72 (171)
38 1hxv_A Trigger factor; FKBP fo 99.7 6.9E-17 2.4E-21 107.7 6.2 70 52-123 28-100 (113)
39 3cgm_A SLYD, peptidyl-prolyl C 99.6 3E-16 1E-20 110.3 7.1 65 54-120 3-67 (158)
40 1kt0_A FKBP51, 51 kDa FK506-bi 99.5 3.9E-14 1.3E-18 112.5 10.3 88 33-122 141-231 (457)
41 1w26_A Trigger factor, TF; cha 99.3 2.4E-12 8.2E-17 102.8 7.8 71 52-123 156-228 (432)
42 1t11_A Trigger factor, TF; hel 99.2 1.6E-11 5.4E-16 97.0 5.0 71 52-123 159-231 (392)
43 3gty_X Trigger factor, TF; cha 97.9 1.7E-05 5.9E-10 63.2 5.9 55 53-111 154-210 (433)
44 3htx_A HEN1; HEN1, small RNA m 80.9 6.1 0.00021 34.4 7.8 59 52-110 559-649 (950)
45 2lj4_A Peptidyl-prolyl CIS-tra 47.2 6.7 0.00023 25.0 1.1 31 85-116 78-108 (115)
46 2pv1_A Chaperone SURA; surviVa 37.5 21 0.00071 21.8 2.3 24 85-108 64-87 (103)
47 3bmb_A Regulator of nucleoside 34.0 33 0.0011 22.3 2.9 25 89-113 90-114 (136)
48 2rqs_A Parvulin-like peptidyl- 33.4 20 0.00068 21.7 1.7 24 84-107 59-82 (97)
49 3gpk_A PPIC-type peptidyl-prol 31.6 18 0.00063 22.8 1.3 24 85-108 65-88 (112)
50 2f23_A Anti-cleavage anti-GREA 31.4 40 0.0014 22.5 3.1 64 43-113 73-145 (156)
51 1jns_A Peptidyl-prolyl CIS-tra 30.5 17 0.00059 21.8 1.0 22 86-107 54-75 (92)
52 2lkt_A Retinoic acid receptor 29.4 71 0.0024 20.1 3.9 23 52-74 6-34 (125)
53 2p4v_A Transcription elongatio 25.9 45 0.0015 22.4 2.6 25 89-113 120-144 (158)
54 2pn0_A Prokaryotic transcripti 25.9 34 0.0012 22.5 1.9 56 52-113 55-117 (141)
55 2p5d_A UPF0310 protein mjecl36 22.6 66 0.0023 21.3 2.8 24 93-118 31-54 (147)
56 3fm3_A Methionine aminopeptida 20.7 2E+02 0.0068 21.7 5.5 50 52-104 119-174 (358)
No 1
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.93 E-value=5.8e-26 Score=152.46 Aligned_cols=95 Identities=32% Similarity=0.673 Sum_probs=90.1
Q ss_pred ccceeeecCCCCEEEEEEEcCCCC-CCCCCCCEEEEEEEEEecCCcEEeccccEEEEeCCCCcHHHHHHHhcCcCCCcEE
Q psy18101 28 EDEWVDILGSGHIKKKITKHGEPD-TRPQRGDLCVISGFGKLEDDTLVETFDNLEICVGDLELVHGMDYVLPLMEMGEEC 106 (126)
Q Consensus 28 ~~~~~~~~~~g~v~k~il~~G~g~-~~p~~gd~V~v~y~~~~~dG~v~d~~~p~~f~lG~~~li~gle~al~~M~~Ge~~ 106 (126)
.++|++++.+|+++++++++|+|. ..|+.||.|++||++++.||++|++++|+.|.+|.+++++||+++|.+|++|+++
T Consensus 3 ~~~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~ 82 (118)
T 2awg_A 3 PEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETA 82 (118)
T ss_dssp TTCEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEEEEEEEETTSSCSCHHHHHHGGGSCTTCEE
T ss_pred cccceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECCCCEEEEECCCChhHHHHHHHhCCCCCCEE
Confidence 678999999999999999999985 3799999999999999899999999899999999999999999999999999999
Q ss_pred EEEEcCCCCcCCCCCC
Q psy18101 107 QIEITARFGYGDKGEP 122 (126)
Q Consensus 107 ~~~ip~~~ayG~~G~~ 122 (126)
+|.|||++|||..+++
T Consensus 83 ~~~ip~~~ayG~~~~~ 98 (118)
T 2awg_A 83 MVTADSKYCYGPQGRS 98 (118)
T ss_dssp EEEECGGGTTTTTCBT
T ss_pred EEEEChHHccCCCCCC
Confidence 9999999999999864
No 2
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.92 E-value=4.9e-25 Score=155.14 Aligned_cols=97 Identities=31% Similarity=0.658 Sum_probs=90.4
Q ss_pred ccccceeeecCCCCEEEEEEEcCCCC-CCCCCCCEEEEEEEEEecCCcEEeccccEEEEeCCCCcHHHHHHHhcCcCCCc
Q psy18101 26 EVEDEWVDILGSGHIKKKITKHGEPD-TRPQRGDLCVISGFGKLEDDTLVETFDNLEICVGDLELVHGMDYVLPLMEMGE 104 (126)
Q Consensus 26 ~~~~~~~~~~~~g~v~k~il~~G~g~-~~p~~gd~V~v~y~~~~~dG~v~d~~~p~~f~lG~~~li~gle~al~~M~~Ge 104 (126)
...++|.+++.+|.++|+++++|+|. ..|+.||.|+|||++++.||++|++++|+.|.+|.+++++||+++|.+|++|+
T Consensus 31 ~~~~~~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~~p~~f~lG~g~vi~G~eeaL~gMk~Ge 110 (157)
T 2jwx_A 31 PAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGE 110 (157)
T ss_dssp CCCCSCEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEEEEEEEETTTTSSCHHHHHHTTTSCTTC
T ss_pred ccccccceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecCCCEEEEeCCCChhHHHHHHHcCCCCCC
Confidence 35678999999988899999999994 48999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEcCCCCcCCCC-CC
Q psy18101 105 ECQIEITARFGYGDKG-EP 122 (126)
Q Consensus 105 ~~~~~ip~~~ayG~~G-~~ 122 (126)
+++|.||+++|||.+| .+
T Consensus 111 ~~~v~IP~~~aYG~~g~~~ 129 (157)
T 2jwx_A 111 TAMVTADSKYCYGPQGSRS 129 (157)
T ss_dssp EEEEEECGGGTTTTTCCSS
T ss_pred EEEEEECchhcCCcccccC
Confidence 9999999999999998 43
No 3
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=2.4e-25 Score=152.87 Aligned_cols=97 Identities=31% Similarity=0.651 Sum_probs=91.1
Q ss_pred CcccccceeeecCCCCEEEEEEEcCCCC-CCCCCCCEEEEEEEEEecCCcEEeccccEEEEeCCCCcHHHHHHHhcCcCC
Q psy18101 24 EEEVEDEWVDILGSGHIKKKITKHGEPD-TRPQRGDLCVISGFGKLEDDTLVETFDNLEICVGDLELVHGMDYVLPLMEM 102 (126)
Q Consensus 24 ~~~~~~~~~~~~~~g~v~k~il~~G~g~-~~p~~gd~V~v~y~~~~~dG~v~d~~~p~~f~lG~~~li~gle~al~~M~~ 102 (126)
.+.+.++|++++.+|+++++++++|+|. ..|+.||.|+|||++++.||++|++++|+.|.+|.+++++||+++|.+|++
T Consensus 3 ~~~~~~~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~~p~~f~lG~g~~i~G~e~~L~gm~~ 82 (135)
T 2d9f_A 3 SGSSGEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDV 82 (135)
T ss_dssp CSCCCSSCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEEEEEEEETTSCCSCTTTTTTGGGSCT
T ss_pred CCCCcccCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecCCCEEEEeCCCChhHHHHHHHhCCCC
Confidence 3456789999999999999999999984 489999999999999999999999989999999999999999999999999
Q ss_pred CcEEEEEEcCCCCcCCCC
Q psy18101 103 GEECQIEITARFGYGDKG 120 (126)
Q Consensus 103 Ge~~~~~ip~~~ayG~~G 120 (126)
|++++|.|||++|||..+
T Consensus 83 Ge~~~v~ip~~~aYG~~~ 100 (135)
T 2d9f_A 83 GETAMVTADSKYCYGPQG 100 (135)
T ss_dssp TCEEEEEECHHHHTCTTC
T ss_pred CCEEEEEEChhHccCcCC
Confidence 999999999999999988
No 4
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.92 E-value=2e-24 Score=148.28 Aligned_cols=94 Identities=30% Similarity=0.527 Sum_probs=86.1
Q ss_pred cceeeec--CCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcCcCC
Q psy18101 29 DEWVDIL--GSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPLMEM 102 (126)
Q Consensus 29 ~~~~~~~--~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~M~~ 102 (126)
.+|+|++ .+++++|+++++|+|...|+.||.|+|||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++
T Consensus 3 ~~~~dv~~~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~ 82 (135)
T 1r9h_A 3 GEKIDITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTK 82 (135)
T ss_dssp --CEECSTTCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCB
T ss_pred ccceecccCCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCC
Confidence 3578888 899999999999999657999999999999999999999863 7999999999999999999999999
Q ss_pred CcEEEEEEcCCCCcCCCCCC
Q psy18101 103 GEECQIEITARFGYGDKGEP 122 (126)
Q Consensus 103 Ge~~~~~ip~~~ayG~~G~~ 122 (126)
||+++|.|||++|||+.|.+
T Consensus 83 Ge~~~v~ip~~~aYG~~g~~ 102 (135)
T 1r9h_A 83 GEVAEFTIRSDYGYGDAGSP 102 (135)
T ss_dssp TCEEEEEECGGGTTTTTCBT
T ss_pred CCEEEEEEChHHcCCCCCCC
Confidence 99999999999999998874
No 5
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.91 E-value=2.7e-24 Score=144.21 Aligned_cols=86 Identities=33% Similarity=0.518 Sum_probs=80.5
Q ss_pred CCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc-----------ccEEEEeCCCCcHHHHHHHhcCcCCCcE
Q psy18101 37 SGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF-----------DNLEICVGDLELVHGMDYVLPLMEMGEE 105 (126)
Q Consensus 37 ~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~-----------~p~~f~lG~~~li~gle~al~~M~~Ge~ 105 (126)
+.+++|+++++|+|...|+.||.|+|||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++||+
T Consensus 3 p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~ 82 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEK 82 (119)
T ss_dssp SCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTCE
T ss_pred CCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCCE
Confidence 45799999999999667999999999999999999999863 7999999999999999999999999999
Q ss_pred EEEEEcCCCCcCCCCCC
Q psy18101 106 CQIEITARFGYGDKGEP 122 (126)
Q Consensus 106 ~~~~ip~~~ayG~~G~~ 122 (126)
++|.|||++|||++|.+
T Consensus 83 ~~v~ip~~~aYG~~g~~ 99 (119)
T 3kz7_A 83 ARLEIEPEWAYGKKGQP 99 (119)
T ss_dssp EEEEECGGGTTCTTCBG
T ss_pred EEEEECcHHhcCCCCCC
Confidence 99999999999999875
No 6
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.91 E-value=3.5e-24 Score=148.55 Aligned_cols=96 Identities=20% Similarity=0.358 Sum_probs=87.8
Q ss_pred ccceeeec--CCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcCcC
Q psy18101 28 EDEWVDIL--GSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPLME 101 (126)
Q Consensus 28 ~~~~~~~~--~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~M~ 101 (126)
..+++|++ .+++++|+++++|+|...|+.||.|+|||++++.||++|+++ +|+.|.+|.+++++||+++|.+|+
T Consensus 23 ~~~~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~ 102 (144)
T 3o5e_A 23 AEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMK 102 (144)
T ss_dssp HHHCEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCC
T ss_pred ccccccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCC
Confidence 44567777 899999999999999668999999999999999999999863 689999999999999999999999
Q ss_pred CCcEEEEEEcCCCCcCCCCCCC
Q psy18101 102 MGEECQIEITARFGYGDKGEPI 123 (126)
Q Consensus 102 ~Ge~~~~~ip~~~ayG~~G~~~ 123 (126)
+||+++|.|||++|||.+|+++
T Consensus 103 ~Ge~~~v~ipp~~aYG~~g~~~ 124 (144)
T 3o5e_A 103 KGEICHLLCKPEYAYGSAGSLP 124 (144)
T ss_dssp BTCEEEEEECGGGTTTTTCBTT
T ss_pred CCCEEEEEEChHHCcCCCCCCC
Confidence 9999999999999999998753
No 7
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.91 E-value=1.3e-23 Score=142.96 Aligned_cols=93 Identities=20% Similarity=0.352 Sum_probs=84.8
Q ss_pred eeeec--CCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEec----cccEEEEeCCCCcHHHHHHHhcCcCCCc
Q psy18101 31 WVDIL--GSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVET----FDNLEICVGDLELVHGMDYVLPLMEMGE 104 (126)
Q Consensus 31 ~~~~~--~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~----~~p~~f~lG~~~li~gle~al~~M~~Ge 104 (126)
.+|++ .+++++|+++++|+|...|+.||.|+|||++++.||++|++ .+|+.|.+|.+++++||+++|.+|++|+
T Consensus 10 ~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge 89 (128)
T 3o5q_A 10 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGE 89 (128)
T ss_dssp CEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred cceecccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCC
Confidence 34444 88899999999999965799999999999999999999986 3799999999999999999999999999
Q ss_pred EEEEEEcCCCCcCCCCCCC
Q psy18101 105 ECQIEITARFGYGDKGEPI 123 (126)
Q Consensus 105 ~~~~~ip~~~ayG~~G~~~ 123 (126)
+++|.|||++|||++|.++
T Consensus 90 ~~~v~ip~~~aYG~~g~~~ 108 (128)
T 3o5q_A 90 ICHLLCKPEYAYGSAGSLP 108 (128)
T ss_dssp EEEEEECGGGTTTTTCBTT
T ss_pred EEEEEEChHHcCCCCCCCC
Confidence 9999999999999998753
No 8
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.90 E-value=2.5e-23 Score=141.47 Aligned_cols=97 Identities=27% Similarity=0.475 Sum_probs=85.8
Q ss_pred cccceeeecCCCCEEEEEEEcC-CCC-CCCCCCCEEEEEEEEEe-cCCcEEecc----ccEEEEeCCCCcHHHHHHHhcC
Q psy18101 27 VEDEWVDILGSGHIKKKITKHG-EPD-TRPQRGDLCVISGFGKL-EDDTLVETF----DNLEICVGDLELVHGMDYVLPL 99 (126)
Q Consensus 27 ~~~~~~~~~~~g~v~k~il~~G-~g~-~~p~~gd~V~v~y~~~~-~dG~v~d~~----~p~~f~lG~~~li~gle~al~~ 99 (126)
...++++++.+|.++++++++| .|. ..|+.||.|+|||++++ .||++|+++ +|+.|.+|.+++++||+++|.+
T Consensus 5 ~~~~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~g 84 (129)
T 2vn1_A 5 QEFEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSS 84 (129)
T ss_dssp --CEEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTT
T ss_pred cccCCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhC
Confidence 3456788889999999999977 442 68999999999999998 799999863 6999999999999999999999
Q ss_pred cCCCcEEEEEEcCCCCcCCCCCCC
Q psy18101 100 MEMGEECQIEITARFGYGDKGEPI 123 (126)
Q Consensus 100 M~~Ge~~~~~ip~~~ayG~~G~~~ 123 (126)
|++||+++|.|||++|||..|+++
T Consensus 85 m~~Ge~~~v~ip~~~aYG~~~~~~ 108 (129)
T 2vn1_A 85 MRKNEKCLVRIESMYGYGDEGCGE 108 (129)
T ss_dssp CCTTCEEEEEECGGGTTTTTCBTT
T ss_pred CCCCCEEEEEEChHHcCCCCCCCC
Confidence 999999999999999999988743
No 9
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.90 E-value=4.8e-23 Score=135.65 Aligned_cols=85 Identities=25% Similarity=0.522 Sum_probs=78.8
Q ss_pred CEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCCC
Q psy18101 39 HIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPLMEMGEECQIEITARF 114 (126)
Q Consensus 39 ~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~~ 114 (126)
+++++++++|+|...|+.||.|++||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++||+++|.|||++
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ 80 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY 80 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHHH
Confidence 589999999999644999999999999999999999864 6999999999999999999999999999999999999
Q ss_pred CcCCCCCCC
Q psy18101 115 GYGDKGEPI 123 (126)
Q Consensus 115 ayG~~G~~~ 123 (126)
|||+.++++
T Consensus 81 ayG~~~~~~ 89 (107)
T 2ppn_A 81 AYGATGHPG 89 (107)
T ss_dssp TTTTTCBTT
T ss_pred ccCCCCCCC
Confidence 999998743
No 10
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.90 E-value=6.8e-24 Score=145.47 Aligned_cols=99 Identities=21% Similarity=0.277 Sum_probs=86.0
Q ss_pred CcccccceeeecCCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEec-CCcEEecc----ccEEEEeCCCCcHHHHHHHhc
Q psy18101 24 EEEVEDEWVDILGSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLE-DDTLVETF----DNLEICVGDLELVHGMDYVLP 98 (126)
Q Consensus 24 ~~~~~~~~~~~~~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~-dG~v~d~~----~p~~f~lG~~~li~gle~al~ 98 (126)
.+.-..+|.+++.+++++|+++++|+| ..+..||.|+|||++++. ||++|+++ +|+.|.+|.+++++||+++|.
T Consensus 12 ~~~~~~~~~~v~~~~gl~~~vl~~G~g-~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~ 90 (134)
T 3b7x_A 12 YERLSQRMLDISGDRGVLKDVIREGAG-DLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLL 90 (134)
T ss_dssp HHHHTTTCEESSSSSSEEEEEEECCEE-EECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHH
T ss_pred hHHhccccceeeCCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHh
Confidence 344567788999999999999999999 478899999999999987 69999853 699999999999999999999
Q ss_pred CcCCCcEEEEEEcCCCCcCCCCCCC
Q psy18101 99 LMEMGEECQIEITARFGYGDKGEPI 123 (126)
Q Consensus 99 ~M~~Ge~~~~~ip~~~ayG~~G~~~ 123 (126)
+|++||+++|.|||++|||..+.++
T Consensus 91 gm~~Ge~~~v~ip~~~aYG~~~~~~ 115 (134)
T 3b7x_A 91 SMRRGELARFLFKPNYAYGTLGCPP 115 (134)
T ss_dssp TCEETCEEEEEECGGGTTTTTCBTT
T ss_pred CCCCCCEEEEEECHHHCcCCCCCCC
Confidence 9999999999999999999998754
No 11
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.89 E-value=3.4e-24 Score=151.86 Aligned_cols=83 Identities=17% Similarity=0.156 Sum_probs=74.8
Q ss_pred cCCCCEEEEEEEcCCCCC-CCCCCCEEEEEEEEEecC--CcEEecc----ccEEEEeCCCCcHHHHHHHhcCcCCCcEEE
Q psy18101 35 LGSGHIKKKITKHGEPDT-RPQRGDLCVISGFGKLED--DTLVETF----DNLEICVGDLELVHGMDYVLPLMEMGEECQ 107 (126)
Q Consensus 35 ~~~g~v~k~il~~G~g~~-~p~~gd~V~v~y~~~~~d--G~v~d~~----~p~~f~lG~~~li~gle~al~~M~~Ge~~~ 107 (126)
+.+.|++|+++++|+|.. .+..|++|+|||++++.| |++||++ +|+.|.+|.+++|+||+++|.+|++||+++
T Consensus 7 ~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~~ 86 (165)
T 2lkn_A 7 LREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIAQ 86 (165)
T ss_dssp HHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCEEE
T ss_pred ccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCceEE
Confidence 456679999999999952 346799999999999854 9999863 799999999999999999999999999999
Q ss_pred EEEcCCCCcC
Q psy18101 108 IEITARFGYG 117 (126)
Q Consensus 108 ~~ip~~~ayG 117 (126)
|+|||++|||
T Consensus 87 ~~ipp~laYG 96 (165)
T 2lkn_A 87 FLCDIKHVVL 96 (165)
T ss_dssp EECCHHHHSS
T ss_pred EEECHHHhcC
Confidence 9999999999
No 12
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.89 E-value=9.3e-23 Score=135.64 Aligned_cols=86 Identities=27% Similarity=0.502 Sum_probs=79.1
Q ss_pred CCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCC
Q psy18101 38 GHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPLMEMGEECQIEITAR 113 (126)
Q Consensus 38 g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~ 113 (126)
.+++++++++|+|...|+.||.|++||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++||+++|.|||+
T Consensus 6 ~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~ip~~ 85 (113)
T 1yat_A 6 GNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPGP 85 (113)
T ss_dssp GGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEECGG
T ss_pred CCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHH
Confidence 3699999999999534999999999999999999999864 699999999999999999999999999999999999
Q ss_pred CCcCCCCCCC
Q psy18101 114 FGYGDKGEPI 123 (126)
Q Consensus 114 ~ayG~~G~~~ 123 (126)
+|||+.+.++
T Consensus 86 ~ayG~~~~~~ 95 (113)
T 1yat_A 86 YAYGPRGFPG 95 (113)
T ss_dssp GTTTTTCBTT
T ss_pred HCcCCCCCCC
Confidence 9999988743
No 13
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.88 E-value=3e-22 Score=135.41 Aligned_cols=88 Identities=26% Similarity=0.379 Sum_probs=80.3
Q ss_pred cCCCCEEEEEEEcCCCC-CCCCCCCEEEEEEEEEec-CCcEEecc------ccEEEEeCCCCcHHHHHHHhcCcCCCcEE
Q psy18101 35 LGSGHIKKKITKHGEPD-TRPQRGDLCVISGFGKLE-DDTLVETF------DNLEICVGDLELVHGMDYVLPLMEMGEEC 106 (126)
Q Consensus 35 ~~~g~v~k~il~~G~g~-~~p~~gd~V~v~y~~~~~-dG~v~d~~------~p~~f~lG~~~li~gle~al~~M~~Ge~~ 106 (126)
+.+.+++++++++|+++ ..|+.||.|+|||++++. ||++|+++ +|+.|.+|.+++++||+++|.+|++||++
T Consensus 9 ~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~ 88 (125)
T 4dip_A 9 IPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKR 88 (125)
T ss_dssp CCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTCEE
T ss_pred ECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCCEE
Confidence 35668999999999832 689999999999999998 99999853 79999999999999999999999999999
Q ss_pred EEEEcCCCCcCCCCCC
Q psy18101 107 QIEITARFGYGDKGEP 122 (126)
Q Consensus 107 ~~~ip~~~ayG~~G~~ 122 (126)
+|.|||++|||+.|++
T Consensus 89 ~~~ip~~~aYG~~g~~ 104 (125)
T 4dip_A 89 KLIIPPALGYGKEGKG 104 (125)
T ss_dssp EEEECGGGTTTTTCBT
T ss_pred EEEEChHHhcCCCCCC
Confidence 9999999999999864
No 14
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.87 E-value=4.9e-22 Score=136.16 Aligned_cols=87 Identities=20% Similarity=0.307 Sum_probs=80.7
Q ss_pred CCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEc
Q psy18101 36 GSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPLMEMGEECQIEIT 111 (126)
Q Consensus 36 ~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip 111 (126)
.+.+++++++++|+| ..|+.||.|+|||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++||+++|.||
T Consensus 26 ~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~ip 104 (133)
T 2y78_A 26 TESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIP 104 (133)
T ss_dssp CTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEEEEC
T ss_pred CCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEEEEC
Confidence 455799999999999 68999999999999999999999863 6999999999999999999999999999999999
Q ss_pred CCCCcCCCCCCC
Q psy18101 112 ARFGYGDKGEPI 123 (126)
Q Consensus 112 ~~~ayG~~G~~~ 123 (126)
|++|||+.+.++
T Consensus 105 ~~~aYG~~~~~~ 116 (133)
T 2y78_A 105 PQLGYGARGAGG 116 (133)
T ss_dssp GGGTTTTTCBTT
T ss_pred cHHhCCCCCCCC
Confidence 999999988764
No 15
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.87 E-value=5.8e-22 Score=135.29 Aligned_cols=87 Identities=23% Similarity=0.420 Sum_probs=78.2
Q ss_pred CCCEEEE--EEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEE
Q psy18101 37 SGHIKKK--ITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPLMEMGEECQIEI 110 (126)
Q Consensus 37 ~g~v~k~--il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~i 110 (126)
+.+++++ ++++|+|...|+.||.|+|||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++||+++|.|
T Consensus 21 ~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~i 100 (130)
T 2lgo_A 21 SMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFTI 100 (130)
T ss_dssp SSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEEEEEEE
T ss_pred CCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEE
Confidence 3456655 9999999544999999999999998899999864 699999999999999999999999999999999
Q ss_pred cCCCCcCCCCCCC
Q psy18101 111 TARFGYGDKGEPI 123 (126)
Q Consensus 111 p~~~ayG~~G~~~ 123 (126)
||.+|||+.+.++
T Consensus 101 p~~~aYG~~~~~~ 113 (130)
T 2lgo_A 101 PYQLAYGERGYPP 113 (130)
T ss_dssp CTTTSTTTTCCST
T ss_pred CcHHHCCCCCCCC
Confidence 9999999998754
No 16
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.87 E-value=1.2e-21 Score=148.85 Aligned_cols=95 Identities=28% Similarity=0.443 Sum_probs=86.7
Q ss_pred cceeeec--CCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcCcCC
Q psy18101 29 DEWVDIL--GSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPLMEM 102 (126)
Q Consensus 29 ~~~~~~~--~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~M~~ 102 (126)
.+++|++ .+++++|+++++|+|..+|+.||.|+|||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++
T Consensus 40 ~~~~di~~~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~ 119 (280)
T 1q1c_A 40 MEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKV 119 (280)
T ss_dssp -CCEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCT
T ss_pred ccccccccCCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCC
Confidence 3567888 789999999999999655999999999999999999999863 6999999999999999999999999
Q ss_pred CcEEEEEEcCCCCcCCCCCCC
Q psy18101 103 GEECQIEITARFGYGDKGEPI 123 (126)
Q Consensus 103 Ge~~~~~ip~~~ayG~~G~~~ 123 (126)
||+++|.|||++|||..|+++
T Consensus 120 Ge~~~v~ipp~~aYG~~g~~~ 140 (280)
T 1q1c_A 120 GEVCHITCKPEYAYGSAGSPP 140 (280)
T ss_dssp TCEEEEEECGGGTTTTTCBTT
T ss_pred CCEEEEEECcHHhCCCcCccC
Confidence 999999999999999988643
No 17
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.86 E-value=3.2e-21 Score=141.16 Aligned_cols=87 Identities=20% Similarity=0.315 Sum_probs=80.9
Q ss_pred CCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEc
Q psy18101 36 GSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPLMEMGEECQIEIT 111 (126)
Q Consensus 36 ~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip 111 (126)
.+.+++++++++|+| ..|+.||.|++||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 102 ~~sGl~~~vl~~G~G-~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v~Ip 180 (209)
T 3uf8_A 102 TESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIP 180 (209)
T ss_dssp CTTSCEEEEEECCCS-CBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEEEEEC
T ss_pred CCCceEEEEEEcCCC-CcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCEEEEEEC
Confidence 456899999999999 57999999999999999999999853 6999999999999999999999999999999999
Q ss_pred CCCCcCCCCCCC
Q psy18101 112 ARFGYGDKGEPI 123 (126)
Q Consensus 112 ~~~ayG~~G~~~ 123 (126)
|++|||++|.++
T Consensus 181 p~~aYG~~g~~~ 192 (209)
T 3uf8_A 181 PQLGYGARGAAG 192 (209)
T ss_dssp GGGTTTTTCBTT
T ss_pred cHHhCCCCCCCC
Confidence 999999998754
No 18
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.85 E-value=1.1e-20 Score=135.45 Aligned_cols=89 Identities=19% Similarity=0.387 Sum_probs=80.0
Q ss_pred eeeecCCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEec-CCcEEecc----ccEEEEeCCC-CcHHHHHHHhcCcCCCc
Q psy18101 31 WVDILGSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLE-DDTLVETF----DNLEICVGDL-ELVHGMDYVLPLMEMGE 104 (126)
Q Consensus 31 ~~~~~~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~-dG~v~d~~----~p~~f~lG~~-~li~gle~al~~M~~Ge 104 (126)
++..+.+ +++|+++++|+| ..|+.||.|+|||++++. ||++|+++ .|+.|.+|.+ ++++||+++|.+|++|+
T Consensus 43 ~~~~~~~-gl~~~vl~~G~G-~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge 120 (180)
T 2f4e_A 43 EAEVLDE-KVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGE 120 (180)
T ss_dssp CCEEEET-TEEEEEEECCBS-CCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCCBTC
T ss_pred CcEECCC-ceEEEEEeCCCC-CCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhCCCCCC
Confidence 3444444 699999999999 599999999999999987 59999853 6999999999 99999999999999999
Q ss_pred EEEEEEcCCCCcCCCCC
Q psy18101 105 ECQIEITARFGYGDKGE 121 (126)
Q Consensus 105 ~~~~~ip~~~ayG~~G~ 121 (126)
+++|.|||++|||..|+
T Consensus 121 ~~~v~iPp~~aYG~~g~ 137 (180)
T 2f4e_A 121 RALVHVGWELAYGKEGN 137 (180)
T ss_dssp EEEEEECGGGTTTTTCB
T ss_pred EEEEEECchHhCCcCCc
Confidence 99999999999999886
No 19
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.85 E-value=3.3e-21 Score=136.78 Aligned_cols=85 Identities=21% Similarity=0.309 Sum_probs=76.9
Q ss_pred CCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEc
Q psy18101 36 GSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPLMEMGEECQIEIT 111 (126)
Q Consensus 36 ~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip 111 (126)
-+.+++|+++++|+|...|+.||.|+|||++++.||++|+++ .|+.|.+ +++|+||+++|.+|++|++++|.||
T Consensus 35 ~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~~Ip 112 (167)
T 1jvw_A 35 LPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRP--NEVIKGWTEALQLMREGDRWRLFIP 112 (167)
T ss_dssp CTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECG--GGSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEe--CchhHHHHHHHcCCCCCCEEEEEEC
Confidence 345799999999999533999999999999999999999864 7999998 5899999999999999999999999
Q ss_pred CCCCcCCCCCC
Q psy18101 112 ARFGYGDKGEP 122 (126)
Q Consensus 112 ~~~ayG~~G~~ 122 (126)
|.+|||..|.+
T Consensus 113 ~~laYG~~g~~ 123 (167)
T 1jvw_A 113 YDLAYGVTGGG 123 (167)
T ss_dssp GGGTTTTTCSS
T ss_pred chhhCCCCCCC
Confidence 99999999864
No 20
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.85 E-value=3.4e-21 Score=141.89 Aligned_cols=84 Identities=17% Similarity=0.254 Sum_probs=78.5
Q ss_pred CCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEec-cccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCCCC
Q psy18101 37 SGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVET-FDNLEICVGDLELVHGMDYVLPLMEMGEECQIEITARFG 115 (126)
Q Consensus 37 ~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~-~~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~~a 115 (126)
+.|++++++++|+| ..|..||.|+|||++++.||++|++ +.|+.|.+| ++|+||+++|.+|++|++++|.|||++|
T Consensus 116 ~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~IPp~lA 192 (219)
T 3oe2_A 116 ADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQSTQPQWFRLD--SVISGWTSALQNMPTGAKWRLVIPSDQA 192 (219)
T ss_dssp GGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEECSSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEEECGGGT
T ss_pred CCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeeccCCcEEEEec--chhHHHHHHHhCCCCCCEEEEEECchhc
Confidence 45799999999999 5899999999999999999999987 579999997 7999999999999999999999999999
Q ss_pred cCCCCCCC
Q psy18101 116 YGDKGEPI 123 (126)
Q Consensus 116 yG~~G~~~ 123 (126)
||++|.++
T Consensus 193 YG~~g~~~ 200 (219)
T 3oe2_A 193 YGAEGAGD 200 (219)
T ss_dssp TTTTCBTT
T ss_pred CCCCCCCC
Confidence 99998765
No 21
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.84 E-value=5.2e-21 Score=130.16 Aligned_cols=84 Identities=23% Similarity=0.316 Sum_probs=78.3
Q ss_pred CCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcC------cCCCcEE
Q psy18101 37 SGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPL------MEMGEEC 106 (126)
Q Consensus 37 ~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~------M~~Ge~~ 106 (126)
+.+++++++++|+| ..|+.||.|+|||++++.||++|+++ +|+.|.+|.+++++||+++|.+ |++|+++
T Consensus 11 ~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~Ge~~ 89 (129)
T 1u79_A 11 PSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKR 89 (129)
T ss_dssp TTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBTTCEE
T ss_pred CCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCCCCEE
Confidence 45799999999999 58999999999999999999999863 7999999999999999999998 9999999
Q ss_pred EEEEcCCCCcCCCCC
Q psy18101 107 QIEITARFGYGDKGE 121 (126)
Q Consensus 107 ~~~ip~~~ayG~~G~ 121 (126)
+|.|||++|||+++.
T Consensus 90 ~v~ip~~~aYG~~~~ 104 (129)
T 1u79_A 90 TLRIPPELAYGDRGA 104 (129)
T ss_dssp EEEECGGGTTGGGCE
T ss_pred EEEEChHHccCCCCC
Confidence 999999999999875
No 22
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.84 E-value=1.9e-20 Score=137.50 Aligned_cols=84 Identities=20% Similarity=0.357 Sum_probs=77.3
Q ss_pred CCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEc
Q psy18101 36 GSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPLMEMGEECQIEIT 111 (126)
Q Consensus 36 ~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip 111 (126)
-+.+++++++++|+| ..|+.||.|+|||++++.||++|+++ .|+.|.+ +++|+||+++|.+|++|++++|.||
T Consensus 104 ~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~IP 180 (213)
T 1fd9_A 104 LPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQV--SQVIPGWTEALQLMPAGSTWEIYVP 180 (213)
T ss_dssp CTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEG--GGSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEc--CchhhHHHHHHcCCCCCCEEEEEEC
Confidence 345799999999999 69999999999999999999999863 7999999 4799999999999999999999999
Q ss_pred CCCCcCCCCCC
Q psy18101 112 ARFGYGDKGEP 122 (126)
Q Consensus 112 ~~~ayG~~G~~ 122 (126)
|+++||..|.+
T Consensus 181 ~~laYG~~g~~ 191 (213)
T 1fd9_A 181 SGLAYGPRSVG 191 (213)
T ss_dssp GGGTTTTCCCS
T ss_pred chhccCccCCC
Confidence 99999999864
No 23
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.83 E-value=4.2e-21 Score=152.75 Aligned_cols=96 Identities=20% Similarity=0.357 Sum_probs=65.8
Q ss_pred ccceeeec--CCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcCcC
Q psy18101 28 EDEWVDIL--GSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPLME 101 (126)
Q Consensus 28 ~~~~~~~~--~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~M~ 101 (126)
...++|++ .+++++|+++++|+|...|+.||.|+|||++++.||++|+++ .|+.|.+|.+++|+||+++|.+|+
T Consensus 19 ~~~~~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~ 98 (457)
T 1kt0_A 19 AEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMK 98 (457)
T ss_dssp --------------CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCC
T ss_pred CCCcccccCCCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCC
Confidence 34567777 889999999999999655999999999999998899999863 699999999999999999999999
Q ss_pred CCcEEEEEEcCCCCcCCCCCCC
Q psy18101 102 MGEECQIEITARFGYGDKGEPI 123 (126)
Q Consensus 102 ~Ge~~~~~ip~~~ayG~~G~~~ 123 (126)
+||++.|.|||.++||..|+++
T Consensus 99 ~Ge~~~~~i~~~~~yg~~g~~~ 120 (457)
T 1kt0_A 99 RGEICHLLCKPEYAYGSAGSLP 120 (457)
T ss_dssp TTCEEEEEECGGGTTTTTCBTT
T ss_pred CCCEEEEEEChHHhccccCCCC
Confidence 9999999999999999998754
No 24
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.83 E-value=1.9e-20 Score=146.06 Aligned_cols=97 Identities=25% Similarity=0.405 Sum_probs=87.4
Q ss_pred cccccce---eeecCCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEec-----cccEEEEeCCCCcHHHHHHH
Q psy18101 25 EEVEDEW---VDILGSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVET-----FDNLEICVGDLELVHGMDYV 96 (126)
Q Consensus 25 ~~~~~~~---~~~~~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~-----~~p~~f~lG~~~li~gle~a 96 (126)
+++.-+| .+++.+++++++++++|+|..+|+.||.|+|||++++.||++|++ .+|+.|.+|.+++|+||+++
T Consensus 228 ~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~ 307 (356)
T 3jxv_A 228 DLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRA 307 (356)
T ss_dssp EEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCTTSCCCEEETTTTSSCHHHHHH
T ss_pred EEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccccCCcCEEEEECCCccchHHHHH
Confidence 4555555 357788999999999999977999999999999999999999974 36999999999999999999
Q ss_pred hcCcCCCcEEEEEEcCCCCcCCCCC
Q psy18101 97 LPLMEMGEECQIEITARFGYGDKGE 121 (126)
Q Consensus 97 l~~M~~Ge~~~~~ip~~~ayG~~G~ 121 (126)
|.+|++||+++|.|||++|||+++.
T Consensus 308 l~gm~~Ge~~~v~ip~~~aYG~~~~ 332 (356)
T 3jxv_A 308 VLNMKKGEVALVTIPPEYAYGSTES 332 (356)
T ss_dssp HTTCCBTCEEEEEECGGGTTTTSCE
T ss_pred HhCCCCCCEEEEEEChHHccCCCCc
Confidence 9999999999999999999998874
No 25
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.82 E-value=5.7e-20 Score=135.83 Aligned_cols=83 Identities=20% Similarity=0.334 Sum_probs=76.9
Q ss_pred CCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcC
Q psy18101 37 SGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPLMEMGEECQIEITA 112 (126)
Q Consensus 37 ~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~ 112 (126)
+.+++++++++|+| ..|+.||.|+|||++++.||++|+++ .|+.|.+ +++|+||+++|.+|++|++++|.|||
T Consensus 120 ~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~IP~ 196 (224)
T 1q6h_A 120 STGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLVIPP 196 (224)
T ss_dssp TTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEG--GGSCHHHHHHGGGSCTTCEEEEEECG
T ss_pred CCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEc--CCcchhHHHHHcCCCCCCEEEEEECc
Confidence 55799999999999 58999999999999999999999864 6999999 47999999999999999999999999
Q ss_pred CCCcCCCCCC
Q psy18101 113 RFGYGDKGEP 122 (126)
Q Consensus 113 ~~ayG~~G~~ 122 (126)
+++||..+.+
T Consensus 197 ~laYG~~g~~ 206 (224)
T 1q6h_A 197 ELAYGKAGVP 206 (224)
T ss_dssp GGTTTTTCBT
T ss_pred hhhcCcCCCC
Confidence 9999999874
No 26
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.82 E-value=7.6e-20 Score=142.69 Aligned_cols=92 Identities=29% Similarity=0.467 Sum_probs=87.5
Q ss_pred eeecCCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEeccccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEc
Q psy18101 32 VDILGSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETFDNLEICVGDLELVHGMDYVLPLMEMGEECQIEIT 111 (126)
Q Consensus 32 ~~~~~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip 111 (126)
.|+..++++.++++++|.|+.+|..||.|+|||++++.||++|+++.++.|.+|++++++||+++|.+|++||+++++||
T Consensus 121 ~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt~~~~~~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~ 200 (356)
T 3jxv_A 121 RDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVK 200 (356)
T ss_dssp EETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEEEEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEEC
T ss_pred cccccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCCEEeccCCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEC
Confidence 46678899999999999998899999999999999999999999888999999999999999999999999999999999
Q ss_pred CCCCcCCCCCCC
Q psy18101 112 ARFGYGDKGEPI 123 (126)
Q Consensus 112 ~~~ayG~~G~~~ 123 (126)
|+++||+.|++.
T Consensus 201 p~~~yg~~G~~~ 212 (356)
T 3jxv_A 201 PQYGFGEMGRPA 212 (356)
T ss_dssp GGGTTTTTCBCC
T ss_pred hHhhcCCCCCCc
Confidence 999999999875
No 27
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.79 E-value=5.8e-19 Score=134.08 Aligned_cols=85 Identities=25% Similarity=0.479 Sum_probs=79.2
Q ss_pred CCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEeccccEEEEeCCCC---cHHHHHHHhcCcCCCcEEEEEEcC
Q psy18101 36 GSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETFDNLEICVGDLE---LVHGMDYVLPLMEMGEECQIEITA 112 (126)
Q Consensus 36 ~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~~p~~f~lG~~~---li~gle~al~~M~~Ge~~~~~ip~ 112 (126)
.+++++++++++|+|...|+.||.|+|||++++ ||++|++ +++.|.+|.++ +++||+++|.+|++||+++|.|||
T Consensus 166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~~fd~-~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~ 243 (280)
T 1q1c_A 166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQ-RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKP 243 (280)
T ss_dssp CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTEEEEE-EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECG
T ss_pred cccceeEEeeecccccccccCCceEEEEEEEEe-CCEEEec-CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEECh
Confidence 789999999999999767999999999999987 9999997 69999999987 599999999999999999999999
Q ss_pred CCCcCCCCCC
Q psy18101 113 RFGYGDKGEP 122 (126)
Q Consensus 113 ~~ayG~~G~~ 122 (126)
+++||..|++
T Consensus 244 ~~~yG~~~~~ 253 (280)
T 1q1c_A 244 SYAFGSVGKE 253 (280)
T ss_dssp GGTTTTTCBG
T ss_pred hHcCCcCCCc
Confidence 9999998754
No 28
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.79 E-value=3.9e-19 Score=115.98 Aligned_cols=71 Identities=30% Similarity=0.515 Sum_probs=66.5
Q ss_pred CCCCCCCEEEEEEEEEecCCcEEec----cccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCCCCcCCCCCC
Q psy18101 52 TRPQRGDLCVISGFGKLEDDTLVET----FDNLEICVGDLELVHGMDYVLPLMEMGEECQIEITARFGYGDKGEP 122 (126)
Q Consensus 52 ~~p~~gd~V~v~y~~~~~dG~v~d~----~~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~~ayG~~G~~ 122 (126)
..++.||.|+|||++++.||++|++ .+|+.|.+|.+++++||+++|.+|++|++++|.|||++|||..+.+
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~ 78 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAP 78 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBT
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCC
Confidence 4789999999999999889999986 3799999999999999999999999999999999999999998864
No 29
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.78 E-value=4.1e-19 Score=136.28 Aligned_cols=84 Identities=19% Similarity=0.390 Sum_probs=78.0
Q ss_pred CCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecC-CcEEec----cccEEEEeCCC-CcHHHHHHHhcCcCCCcEEEEEE
Q psy18101 37 SGHIKKKITKHGEPDTRPQRGDLCVISGFGKLED-DTLVET----FDNLEICVGDL-ELVHGMDYVLPLMEMGEECQIEI 110 (126)
Q Consensus 37 ~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~d-G~v~d~----~~p~~f~lG~~-~li~gle~al~~M~~Ge~~~~~i 110 (126)
+.++.|+++++|+| ..|..||.|+|||++++.+ |++|++ ++|+.|.+|.+ ++|+||+++|.+|++||++.|.|
T Consensus 48 ~~~~~~~~~~~g~g-~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~i 126 (338)
T 2if4_A 48 DEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHV 126 (338)
T ss_dssp ETTEEEEEEECCBS-CCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEEEEE
T ss_pred CCCeEEEEEeCCCC-CCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEEEEE
Confidence 45799999999999 4899999999999999875 999985 37999999998 89999999999999999999999
Q ss_pred cCCCCcCCCCC
Q psy18101 111 TARFGYGDKGE 121 (126)
Q Consensus 111 p~~~ayG~~G~ 121 (126)
||.++||..|.
T Consensus 127 ~~~~~yg~~~~ 137 (338)
T 2if4_A 127 GWELAYGKEGN 137 (338)
T ss_dssp CGGGSSCSSCC
T ss_pred CHHHhcCCCCC
Confidence 99999999886
No 30
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.75 E-value=2.5e-18 Score=120.85 Aligned_cols=67 Identities=24% Similarity=0.438 Sum_probs=62.7
Q ss_pred CCCCCEEEEEEEEEecCCcEEecc-----------------ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCCCCc
Q psy18101 54 PQRGDLCVISGFGKLEDDTLVETF-----------------DNLEICVGDLELVHGMDYVLPLMEMGEECQIEITARFGY 116 (126)
Q Consensus 54 p~~gd~V~v~y~~~~~dG~v~d~~-----------------~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~~ay 116 (126)
++.||.|+|||++++ ||++|+++ +|+.|.+|.+++|+||++||.+|++||+++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 578999999999999 99999853 599999999999999999999999999999999999999
Q ss_pred CCCCC
Q psy18101 117 GDKGE 121 (126)
Q Consensus 117 G~~G~ 121 (126)
|+++.
T Consensus 81 G~~~~ 85 (157)
T 3pr9_A 81 GKRDP 85 (157)
T ss_dssp CCCCG
T ss_pred CCCCh
Confidence 98763
No 31
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.75 E-value=9.4e-18 Score=128.45 Aligned_cols=91 Identities=23% Similarity=0.421 Sum_probs=80.7
Q ss_pred ceeeecCCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEeccccEEEEeCCCC---cHHHHHHHhcCcCCCcEE
Q psy18101 30 EWVDILGSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETFDNLEICVGDLE---LVHGMDYVLPLMEMGEEC 106 (126)
Q Consensus 30 ~~~~~~~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~~p~~f~lG~~~---li~gle~al~~M~~Ge~~ 106 (126)
.+++++.+++++|+|+++|.|..+|..|+.|+|||++++ +|++||++ |+.|.+|.+. ++++|++||..|++||++
T Consensus 17 ~~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~ 94 (336)
T 1p5q_A 17 RGSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-ELRFEIGEGENLDLPYGLERAIQRMEKGEHS 94 (336)
T ss_dssp -----CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-EEEEETTCGGGGTCCHHHHHHHTTCCTTCEE
T ss_pred cceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-CeEEEeCCCCccccchHHHHHHhcCCCCCeE
Confidence 567888999999999999999668999999999999998 99999976 9999999886 589999999999999999
Q ss_pred EEEEcCCCCcCCCCCC
Q psy18101 107 QIEITARFGYGDKGEP 122 (126)
Q Consensus 107 ~~~ip~~~ayG~~G~~ 122 (126)
.+.|+|.++||..|.+
T Consensus 95 ~l~i~p~~ayg~~g~~ 110 (336)
T 1p5q_A 95 IVYLKPSYAFGSVGKE 110 (336)
T ss_dssp EEEECTTTTTTTTCBG
T ss_pred EEEECCccccCcCCCC
Confidence 9999999999999865
No 32
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.74 E-value=6.8e-18 Score=119.87 Aligned_cols=68 Identities=19% Similarity=0.266 Sum_probs=64.4
Q ss_pred CCCCCCEEEEEEEEEecCCcEEecc----ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCCCCcCCCC
Q psy18101 53 RPQRGDLCVISGFGKLEDDTLVETF----DNLEICVGDLELVHGMDYVLPLMEMGEECQIEITARFGYGDKG 120 (126)
Q Consensus 53 ~p~~gd~V~v~y~~~~~dG~v~d~~----~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~~ayG~~G 120 (126)
.++.||.|+|||++++.||++|+++ +|+.|.+|.+++|+||+++|.+|++||++.|.|||++|||++.
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 5789999999999999999999864 7999999999999999999999999999999999999999864
No 33
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.72 E-value=4.2e-18 Score=118.90 Aligned_cols=68 Identities=31% Similarity=0.527 Sum_probs=63.5
Q ss_pred CCCCCEEEEEEEEEecCCcEEecc-----------------ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCCCCc
Q psy18101 54 PQRGDLCVISGFGKLEDDTLVETF-----------------DNLEICVGDLELVHGMDYVLPLMEMGEECQIEITARFGY 116 (126)
Q Consensus 54 p~~gd~V~v~y~~~~~dG~v~d~~-----------------~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~~ay 116 (126)
++.||.|++||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|++++|.|||++||
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aY 81 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAY 81 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSS
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHC
Confidence 678999999999998899999864 599999999999999999999999999999999999999
Q ss_pred CCCCC
Q psy18101 117 GDKGE 121 (126)
Q Consensus 117 G~~G~ 121 (126)
|+++.
T Consensus 82 G~~~~ 86 (151)
T 1ix5_A 82 GNRNE 86 (151)
T ss_dssp CSCCS
T ss_pred CCCCc
Confidence 98763
No 34
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.71 E-value=3.5e-17 Score=114.23 Aligned_cols=70 Identities=14% Similarity=0.221 Sum_probs=64.9
Q ss_pred CCCCCCCEEEEEEEEEec-CCcEEecc---ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCCCCcCCCCC
Q psy18101 52 TRPQRGDLCVISGFGKLE-DDTLVETF---DNLEICVGDLELVHGMDYVLPLMEMGEECQIEITARFGYGDKGE 121 (126)
Q Consensus 52 ~~p~~gd~V~v~y~~~~~-dG~v~d~~---~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~~ayG~~G~ 121 (126)
..++.||.|++||++++. ||++|+++ +|+.|.+|.+++++||+++|.+|++|+++.|.|||++|||+++.
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISKEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTTCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCCcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 357899999999999987 99999864 69999999999999999999999999999999999999998763
No 35
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.70 E-value=3.2e-17 Score=121.49 Aligned_cols=66 Identities=24% Similarity=0.447 Sum_probs=62.3
Q ss_pred CCCCCEEEEEEEEEecCCcEEecc-----------------ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCCCCc
Q psy18101 54 PQRGDLCVISGFGKLEDDTLVETF-----------------DNLEICVGDLELVHGMDYVLPLMEMGEECQIEITARFGY 116 (126)
Q Consensus 54 p~~gd~V~v~y~~~~~dG~v~d~~-----------------~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~~ay 116 (126)
++.||.|++||++++ ||++|+++ +|+.|.+|.+++++||+++|.+|++|+++.|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 578999999999999 99999853 599999999999999999999999999999999999999
Q ss_pred CCCC
Q psy18101 117 GDKG 120 (126)
Q Consensus 117 G~~G 120 (126)
|+++
T Consensus 81 Ge~~ 84 (231)
T 3prb_A 81 GKRD 84 (231)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9876
No 36
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.69 E-value=7.8e-17 Score=116.84 Aligned_cols=68 Identities=21% Similarity=0.312 Sum_probs=63.8
Q ss_pred CCCCCCEEEEEEEEEecCCcEEecc---ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCCCCcCCCC
Q psy18101 53 RPQRGDLCVISGFGKLEDDTLVETF---DNLEICVGDLELVHGMDYVLPLMEMGEECQIEITARFGYGDKG 120 (126)
Q Consensus 53 ~p~~gd~V~v~y~~~~~dG~v~d~~---~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~~ayG~~G 120 (126)
.++.||+|+|||++++.||++|+++ +|+.|.+|.+++|+||+++|.+|++|++++|.|||++|||+++
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~ 72 (196)
T 2kfw_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (196)
T ss_dssp CCCSSCEEEEEEEEEETTTEEEEECCTTSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecCCCCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 3678999999999998899999864 6999999999999999999999999999999999999999875
No 37
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.69 E-value=8.3e-17 Score=114.47 Aligned_cols=67 Identities=21% Similarity=0.303 Sum_probs=63.2
Q ss_pred CCCCCEEEEEEEEEecCCcEEecc---ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCCCCcCCCC
Q psy18101 54 PQRGDLCVISGFGKLEDDTLVETF---DNLEICVGDLELVHGMDYVLPLMEMGEECQIEITARFGYGDKG 120 (126)
Q Consensus 54 p~~gd~V~v~y~~~~~dG~v~d~~---~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~~ayG~~G 120 (126)
++.||.|+++|++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|++++|.|||++|||+++
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSSSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCCcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 678999999999998899999864 6999999999999999999999999999999999999999875
No 38
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.67 E-value=6.9e-17 Score=107.73 Aligned_cols=70 Identities=20% Similarity=0.333 Sum_probs=62.2
Q ss_pred CCCCCCCEEEEEEEEEecCCcEEecc--ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEc-CCCCcCCCCCCC
Q psy18101 52 TRPQRGDLCVISGFGKLEDDTLVETF--DNLEICVGDLELVHGMDYVLPLMEMGEECQIEIT-ARFGYGDKGEPI 123 (126)
Q Consensus 52 ~~p~~gd~V~v~y~~~~~dG~v~d~~--~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip-~~~ayG~~G~~~ 123 (126)
..++.||.|+|||++++ ||++|+++ +|+.|.+|.+++|+||+++|.+|++|++++|.|+ |.. ||..+.++
T Consensus 28 ~~~~~gD~V~v~Y~g~~-dG~~fdss~~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~~~g 100 (113)
T 1hxv_A 28 KKLANGDIAIIDFTGIV-DNKKLASASAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSD-YHVKELQS 100 (113)
T ss_dssp -CCCSSEEEEEEEEEEE-TTEECSTTCCSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTT-SSSSGGGS
T ss_pred CCCCCCCEEEEEEEEEE-CCEEcccCCccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchh-hCcCCCCC
Confidence 46889999999999998 99999874 7999999999999999999999999999999996 444 99876554
No 39
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.64 E-value=3e-16 Score=110.31 Aligned_cols=65 Identities=20% Similarity=0.258 Sum_probs=61.7
Q ss_pred CCCCCEEEEEEEEEecCCcEEeccccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCCCCcCCCC
Q psy18101 54 PQRGDLCVISGFGKLEDDTLVETFDNLEICVGDLELVHGMDYVLPLMEMGEECQIEITARFGYGDKG 120 (126)
Q Consensus 54 p~~gd~V~v~y~~~~~dG~v~d~~~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~~ayG~~G 120 (126)
++.||.|++||+++ .||++|+++. +.|.+|.+++++||+++|.+|++|+++.|.|||++|||+++
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~ 67 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD 67 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC
Confidence 67899999999999 8999999876 99999999999999999999999999999999999999875
No 40
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.53 E-value=3.9e-14 Score=112.54 Aligned_cols=88 Identities=25% Similarity=0.553 Sum_probs=80.2
Q ss_pred eecCCCCEEEEEEEcCCCCCCCCCCCEEEEEEEEEecCCcEEeccccEEEEeCCC---CcHHHHHHHhcCcCCCcEEEEE
Q psy18101 33 DILGSGHIKKKITKHGEPDTRPQRGDLCVISGFGKLEDDTLVETFDNLEICVGDL---ELVHGMDYVLPLMEMGEECQIE 109 (126)
Q Consensus 33 ~~~~~g~v~k~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~d~~~p~~f~lG~~---~li~gle~al~~M~~Ge~~~~~ 109 (126)
+++.++++.++++++|.|..+|..|+.|++||++++ +|++|++ +++.|.+|.+ .++++|+.||..|+.||++.+.
T Consensus 141 ~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g~~f~~-~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~ 218 (457)
T 1kt0_A 141 DLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GGRMFDC-RDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILY 218 (457)
T ss_dssp ETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TTEEEEE-EEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEE
T ss_pred cccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CCeEEec-CceEEEeCCCccccCChHHHHHHHhCCCCCEEEEE
Confidence 456789999999999999888999999999999998 9999986 4799999976 4899999999999999999999
Q ss_pred EcCCCCcCCCCCC
Q psy18101 110 ITARFGYGDKGEP 122 (126)
Q Consensus 110 ip~~~ayG~~G~~ 122 (126)
++|.++|+..|.+
T Consensus 219 i~P~~ay~~~g~~ 231 (457)
T 1kt0_A 219 LGPRYGFGEAGKP 231 (457)
T ss_dssp ECGGGTTCSSCBG
T ss_pred ECcccccCCCCCc
Confidence 9999999998854
No 41
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.33 E-value=2.4e-12 Score=102.79 Aligned_cols=71 Identities=18% Similarity=0.169 Sum_probs=65.0
Q ss_pred CCCCCCCEEEEEEEEEecCCcEEecc--ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCCCCcCCCCCCC
Q psy18101 52 TRPQRGDLCVISGFGKLEDDTLVETF--DNLEICVGDLELVHGMDYVLPLMEMGEECQIEITARFGYGDKGEPI 123 (126)
Q Consensus 52 ~~p~~gd~V~v~y~~~~~dG~v~d~~--~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~~ayG~~G~~~ 123 (126)
..++.||.|++||+++ .||+.|+++ .|+.|.+|.+++++||+++|.||++|+++.|.+++..+||..+.++
T Consensus 156 ~~~~~gD~V~i~y~g~-~dG~~fd~~~~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~lag 228 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGS-VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKG 228 (432)
T ss_dssp SCCCTTCEEEECEEEE-SSSCBCSSCCCSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTTSS
T ss_pred CCCCCCCEEEEEEEEe-eCCeEccCCCccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCCCC
Confidence 4688999999999998 599999864 7999999999999999999999999999999999999999877655
No 42
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.18 E-value=1.6e-11 Score=96.98 Aligned_cols=71 Identities=18% Similarity=0.163 Sum_probs=62.7
Q ss_pred CCCCCCCEEEEEEEEEecCCcEEecc--ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCCCCcCCCCCCC
Q psy18101 52 TRPQRGDLCVISGFGKLEDDTLVETF--DNLEICVGDLELVHGMDYVLPLMEMGEECQIEITARFGYGDKGEPI 123 (126)
Q Consensus 52 ~~p~~gd~V~v~y~~~~~dG~v~d~~--~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~~ayG~~G~~~ 123 (126)
..++.||.|++||+++ .||+.|+++ .++.|.+|.+++|+||+++|.||++|+++.|.|+....||..+.++
T Consensus 159 ~~~~~gD~V~i~y~g~-~dG~~fd~~~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~laG 231 (392)
T 1t11_A 159 EAAENGKRVSIDFVGS-IDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKG 231 (392)
T ss_dssp CCCCTTCEEEEEEEEE-SSSSCCTTCEEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTTSS
T ss_pred CCCCCCCEEEEEEEEE-ECCEEccCCCccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCCCC
Confidence 3588999999999998 599999864 6999999999999999999999999999999998556788766555
No 43
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.89 E-value=1.7e-05 Score=63.16 Aligned_cols=55 Identities=16% Similarity=0.026 Sum_probs=47.2
Q ss_pred CCCCCCEEEEEEEEEecCCcEEecc--ccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEc
Q psy18101 53 RPQRGDLCVISGFGKLEDDTLVETF--DNLEICVGDLELVHGMDYVLPLMEMGEECQIEIT 111 (126)
Q Consensus 53 ~p~~gd~V~v~y~~~~~dG~v~d~~--~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip 111 (126)
.++.||.|+++|+++ .||+.|+.+ .++.+.+|.+. + |+.+|.||++||...|.+.
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~~~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vt 210 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTSREYEYVISEDEDR--P-FVKDLVGKKKGDVVEIERE 210 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEEEEEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEE
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCCCCCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEe
Confidence 467899999999986 699999853 57788888877 3 9999999999999999884
No 44
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=80.87 E-value=6.1 Score=34.38 Aligned_cols=59 Identities=19% Similarity=0.236 Sum_probs=48.2
Q ss_pred CCCCCCCEEEEEEEEEec-CC-------------------------------cEEeccccEEEEeCCCCcHHHHHHHhcC
Q psy18101 52 TRPQRGDLCVISGFGKLE-DD-------------------------------TLVETFDNLEICVGDLELVHGMDYVLPL 99 (126)
Q Consensus 52 ~~p~~gd~V~v~y~~~~~-dG-------------------------------~v~d~~~p~~f~lG~~~li~gle~al~~ 99 (126)
..+..|+.|.|.|+..+. +| +.+++...+.|.+|.+.+.+-++..|..
T Consensus 559 ~~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~q 638 (950)
T 3htx_A 559 QSITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQ 638 (950)
T ss_dssp -CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTT
T ss_pred eccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeee
Confidence 456889999999999762 22 1445557899999999999999999999
Q ss_pred cCCCcEEEEEE
Q psy18101 100 MEMGEECQIEI 110 (126)
Q Consensus 100 M~~Ge~~~~~i 110 (126)
|..|+...|..
T Consensus 639 ms~gqT~~F~~ 649 (950)
T 3htx_A 639 MTVGEYASFKM 649 (950)
T ss_dssp CCTTCEEEEEE
T ss_pred ccccceeEEec
Confidence 99999998884
No 45
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=47.18 E-value=6.7 Score=25.04 Aligned_cols=31 Identities=13% Similarity=0.313 Sum_probs=23.0
Q ss_pred CCCCcHHHHHHHhcCcCCCcEEEEEEcCCCCc
Q psy18101 85 GDLELVHGMDYVLPLMEMGEECQIEITARFGY 116 (126)
Q Consensus 85 G~~~li~gle~al~~M~~Ge~~~~~ip~~~ay 116 (126)
..+++.+.|+.++..|++|+.... |...++|
T Consensus 78 ~~~~~~~~f~~a~~~l~~GeiS~p-v~t~~G~ 108 (115)
T 2lj4_A 78 SSGEMMKPFEDAVRALKIGDISPI-VQTDSGL 108 (115)
T ss_dssp ETTSSCHHHHHHHTTSCBTCBCCC-EECSSSE
T ss_pred cCCCCCchHHHHHhcCCCCCCCCc-EEeCCeE
Confidence 346799999999999999997652 3344444
No 46
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=37.47 E-value=21 Score=21.80 Aligned_cols=24 Identities=17% Similarity=-0.020 Sum_probs=20.1
Q ss_pred CCCCcHHHHHHHhcCcCCCcEEEE
Q psy18101 85 GDLELVHGMDYVLPLMEMGEECQI 108 (126)
Q Consensus 85 G~~~li~gle~al~~M~~Ge~~~~ 108 (126)
..+.+.+.|+.++..|++|+....
T Consensus 64 ~~~~l~~~f~~a~~~l~~G~is~p 87 (103)
T 2pv1_A 64 RIQELPGIFAQALSTAKKGDIVGP 87 (103)
T ss_dssp CGGGSCHHHHHHTTTCCTTCEEEE
T ss_pred chhhcCHHHHHHHHcCCCCCeecc
Confidence 346788999999999999998653
No 47
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=33.97 E-value=33 Score=22.34 Aligned_cols=25 Identities=12% Similarity=0.222 Sum_probs=21.0
Q ss_pred cHHHHHHHhcCcCCCcEEEEEEcCC
Q psy18101 89 LVHGMDYVLPLMEMGEECQIEITAR 113 (126)
Q Consensus 89 li~gle~al~~M~~Ge~~~~~ip~~ 113 (126)
+..-+-.||.|.++|+.+.+..|..
T Consensus 90 ~~SPlG~ALlGk~~GD~v~v~~p~G 114 (136)
T 3bmb_A 90 VMAPVGAALLGLRVGDSIHWELPGG 114 (136)
T ss_dssp TTSHHHHHHTTCBTTCEEEEEETTT
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 3456889999999999999998764
No 48
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=33.45 E-value=20 Score=21.74 Aligned_cols=24 Identities=17% Similarity=0.266 Sum_probs=20.1
Q ss_pred eCCCCcHHHHHHHhcCcCCCcEEE
Q psy18101 84 VGDLELVHGMDYVLPLMEMGEECQ 107 (126)
Q Consensus 84 lG~~~li~gle~al~~M~~Ge~~~ 107 (126)
+..+++.+.|+.++..|++|+...
T Consensus 59 ~~~~~l~~~f~~a~~~l~~G~is~ 82 (97)
T 2rqs_A 59 FGRGKMVKPFEDAAFRLQVGEVSE 82 (97)
T ss_dssp ECTTSSCHHHHHHHTTCTTSCBCC
T ss_pred EcCCCCCHHHHHHHHcCCCCCccc
Confidence 345678999999999999999754
No 49
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=31.60 E-value=18 Score=22.84 Aligned_cols=24 Identities=13% Similarity=-0.029 Sum_probs=20.4
Q ss_pred CCCCcHHHHHHHhcCcCCCcEEEE
Q psy18101 85 GDLELVHGMDYVLPLMEMGEECQI 108 (126)
Q Consensus 85 G~~~li~gle~al~~M~~Ge~~~~ 108 (126)
..+++.+.|+.++..|++|+....
T Consensus 65 ~~~~l~~~f~~a~~~l~~GeiS~p 88 (112)
T 3gpk_A 65 RLAQLPTELATTAASMGPGQLAGP 88 (112)
T ss_dssp CGGGSCHHHHHHHHHCCTTCEEEE
T ss_pred cccccCHHHHHHHHhCCCCCccce
Confidence 446789999999999999998753
No 50
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=31.42 E-value=40 Score=22.47 Aligned_cols=64 Identities=11% Similarity=0.073 Sum_probs=37.7
Q ss_pred EEEEcCCCCCCCCCCCEEEEEEEEEecCCcEE-------eccccE--EEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCC
Q psy18101 43 KITKHGEPDTRPQRGDLCVISGFGKLEDDTLV-------ETFDNL--EICVGDLELVHGMDYVLPLMEMGEECQIEITAR 113 (126)
Q Consensus 43 ~il~~G~g~~~p~~gd~V~v~y~~~~~dG~v~-------d~~~p~--~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~ 113 (126)
+++..... ..+..|+.|++.. ..+|+.. +...+. .+.+ .+..-+-.||.|.++|+.+.+..|..
T Consensus 73 ~vi~~~~~-~~V~~Gs~V~l~~---~~~~~~~~~~iVg~~ead~~~~~~~I---S~~SPlG~ALlGk~~GD~v~~~~p~G 145 (156)
T 2f23_A 73 VILEEGSG-EVIGLGSVVELED---PLSGERLSVQVVSPAEANVLDTPMKI---SDASPMGKALLGHRVGDVLSLDTPKG 145 (156)
T ss_dssp EECCTTCS-CCCCTTCEEEEEC---TTTCCEEEEEEECGGGCBTTSSSEEE---ETTSHHHHHHTTCCTTCEEEEEETTE
T ss_pred cccCCCCC-CEEEeCcEEEEEE---cCCCCEEEEEEEChhHcCcCCCCEEE---CCCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 44544433 4688899998754 1234211 011110 0122 23346889999999999999998853
No 51
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=30.50 E-value=17 Score=21.76 Aligned_cols=22 Identities=18% Similarity=0.073 Sum_probs=19.1
Q ss_pred CCCcHHHHHHHhcCcCCCcEEE
Q psy18101 86 DLELVHGMDYVLPLMEMGEECQ 107 (126)
Q Consensus 86 ~~~li~gle~al~~M~~Ge~~~ 107 (126)
.+++.+.|+.++..|++|+...
T Consensus 54 ~~~l~~~f~~a~~~l~~G~is~ 75 (92)
T 1jns_A 54 QGQMVPAFDKVVFSCPVLEPTG 75 (92)
T ss_dssp TTSSCHHHHHHHHHSCTTCCEE
T ss_pred CcccCHHHHHHHHhCCCCCcCC
Confidence 3578999999999999999865
No 52
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=29.36 E-value=71 Score=20.12 Aligned_cols=23 Identities=26% Similarity=0.316 Sum_probs=17.0
Q ss_pred CCCCCCCEEEE------EEEEEecCCcEE
Q psy18101 52 TRPQRGDLCVI------SGFGKLEDDTLV 74 (126)
Q Consensus 52 ~~p~~gd~V~v------~y~~~~~dG~v~ 74 (126)
..|++||.+.+ ||-++.-||.++
T Consensus 6 ~ep~pGDlI~~~r~~Y~H~gIYvGdg~Vi 34 (125)
T 2lkt_A 6 QEPKPGDLIEIFRLGYEHWALYIGDGYVI 34 (125)
T ss_dssp CCCCTTCEEEEECSSSCEEEEEEETTEEE
T ss_pred CCCCCCCEEEEeCCCccEEEEEeCCCeEE
Confidence 46788888876 666677788776
No 53
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=25.93 E-value=45 Score=22.37 Aligned_cols=25 Identities=20% Similarity=0.191 Sum_probs=21.3
Q ss_pred cHHHHHHHhcCcCCCcEEEEEEcCC
Q psy18101 89 LVHGMDYVLPLMEMGEECQIEITAR 113 (126)
Q Consensus 89 li~gle~al~~M~~Ge~~~~~ip~~ 113 (126)
+..-+-.||.|.++|+.+.+..|..
T Consensus 120 ~~SPlg~ALlGk~vGD~v~v~~P~G 144 (158)
T 2p4v_A 120 IDSPMARALLKKEVGDLAVVNTPAG 144 (158)
T ss_dssp TTSHHHHHSTTCCTTCEEEEECSSC
T ss_pred CCCHHHHHhcCCCCCCEEEEEcCCC
Confidence 4566889999999999999998754
No 54
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=25.92 E-value=34 Score=22.51 Aligned_cols=56 Identities=9% Similarity=-0.008 Sum_probs=34.0
Q ss_pred CCCCCCCEEEEEEEEEecCCcEE-------eccccEEEEeCCCCcHHHHHHHhcCcCCCcEEEEEEcCC
Q psy18101 52 TRPQRGDLCVISGFGKLEDDTLV-------ETFDNLEICVGDLELVHGMDYVLPLMEMGEECQIEITAR 113 (126)
Q Consensus 52 ~~p~~gd~V~v~y~~~~~dG~v~-------d~~~p~~f~lG~~~li~gle~al~~M~~Ge~~~~~ip~~ 113 (126)
..+..|+.|++.. ..+|+.. +...+....+ .+..-+-.||.|.++|+.+.+..|..
T Consensus 55 ~~V~~Gs~V~l~d---~~~g~~~~~~iVg~~ead~~~~~I---S~~SPlG~ALlGk~vGD~v~v~~P~G 117 (141)
T 2pn0_A 55 TVVTMNSTVRFRV---ESSAEEFCLTLVYPKDVDTSGEKI---SILAPVGSALLGLAQGDEIEWPKPGG 117 (141)
T ss_dssp TBCCTTCEEEEEE---TTTCCEEEEEEECGGGCCSSSCEE---ETTSTTHHHHTTCBTTCEEEEECTTS
T ss_pred CEEEeCcEEEEEE---CCCCCEEEEEEECHhHcCccCCEE---cCCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 4678899998754 1244211 1111111111 23445778999999999999988754
No 55
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=22.55 E-value=66 Score=21.26 Aligned_cols=24 Identities=13% Similarity=0.149 Sum_probs=17.5
Q ss_pred HHHHhcCcCCCcEEEEEEcCCCCcCC
Q psy18101 93 MDYVLPLMEMGEECQIEITARFGYGD 118 (126)
Q Consensus 93 le~al~~M~~Ge~~~~~ip~~~ayG~ 118 (126)
-..-|..|++||.+.|+ + ...|++
T Consensus 31 arn~lr~Mk~GD~~~fY-~-~~~~hs 54 (147)
T 2p5d_A 31 YKNTINKVKVGDKLIIY-E-IQRSGK 54 (147)
T ss_dssp GHHHHTTCCTTCEEEEE-E-CCBCST
T ss_pred HHHHHHhCCCCCEEEEE-E-ecccCC
Confidence 34567799999999999 4 444543
No 56
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=20.71 E-value=2e+02 Score=21.66 Aligned_cols=50 Identities=10% Similarity=0.098 Sum_probs=32.2
Q ss_pred CCCCCCCEEEEEEEEEecCCcEEeccccEEEEeCCC--Cc----HHHHHHHhcCcCCCc
Q psy18101 52 TRPQRGDLCVISGFGKLEDDTLVETFDNLEICVGDL--EL----VHGMDYVLPLMEMGE 104 (126)
Q Consensus 52 ~~p~~gd~V~v~y~~~~~dG~v~d~~~p~~f~lG~~--~l----i~gle~al~~M~~Ge 104 (126)
...+.||.|.|.+-+.. ||-.-|.. .+|.+|.. .+ ..+++.++..+++|-
T Consensus 119 ~~L~~GDiV~ID~G~~~-dGY~sD~a--rT~~vg~~~~~l~~~~~~al~aai~~~~pG~ 174 (358)
T 3fm3_A 119 IVLKEDDVLKIDFGTHS-DGRIMDSA--FTVAFKENLEPLLVAAREGTETGIKSLGVDV 174 (358)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE--EEEECCGGGHHHHHHHHHHHHHHHHHCCTTC
T ss_pred eEecCCCEEEEEeeEEE-CCEEEEEE--EeccccccchhHHHHHHHHHHHHHHhhhcCC
Confidence 56889999999998854 77655533 55667643 12 244556666666553
Done!