BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18105
(333 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H0A0|NAT10_HUMAN N-acetyltransferase 10 OS=Homo sapiens GN=NAT10 PE=1 SV=2
Length = 1025
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/336 (61%), Positives = 248/336 (73%), Gaps = 54/336 (16%)
Query: 1 MKSVQRKVQAGKLNVNEDDPFELFVASTNIRYTYYSETHKILGNTYGMCVLQDFEALTPN 60
M+ +Q+K++ G LN+ +DDPFELF+A+TNIRY YY+ETHKILGNT+GMCVLQDFEALTPN
Sbjct: 73 MRQLQKKIKNGTLNIKQDDPFELFIAATNIRYCYYNETHKILGNTFGMCVLQDFEALTPN 132
Query: 61 LLARTIETVEGGGVIVLLLRTLSSLKQLYTMSMDIHERYRTEAHSDVVCRFNERFLLSLS 120
LLART+ETVEGGG++V+LLRT++SLKQLYT++MD+H RYRTEAH DVV RFNERF+LSL+
Sbjct: 133 LLARTVETVEGGGLVVILLRTMNSLKQLYTVTMDVHSRYRTEAHQDVVGRFNERFILSLA 192
Query: 121 SCNRCLVVDDQLTVLPITSQHVLN---ITPVSKTSDLSQQEQELNALKTSLKDTQPVSAL 177
SC +CLV+DDQL +LPI+S HV + P + L + EL LK SL+DTQPV L
Sbjct: 193 SCKKCLVIDDQLNILPISS-HVATMEALPPQTPDESLGPSDLELRELKESLQDTQPVGVL 251
Query: 178 IDCCKTLDQGKALLKFIDSISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFG 237
+DCCKTLDQ KA+LKFI+ ISEKTLRSTV+LTAARGRGKSAALGLA+AGAVAFGYSNIF
Sbjct: 252 VDCCKTLDQAKAVLKFIEGISEKTLRSTVALTAARGRGKSAALGLAIAGAVAFGYSNIF- 310
Query: 238 KALLKFIDGISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNT 297
VTSPSP+NL+T
Sbjct: 311 -------------------------------------------------VTSPSPDNLHT 321
Query: 298 FFQFIFKGFDALAYQEHLDYSIVQSTEPEYNKALVR 333
F+F+FKGFDAL YQEHLDY I+QS PE+NKA++R
Sbjct: 322 LFEFVFKGFDALQYQEHLDYEIIQSLNPEFNKAVIR 357
>sp|Q8K224|NAT10_MOUSE N-acetyltransferase 10 OS=Mus musculus GN=Nat10 PE=2 SV=1
Length = 1024
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/336 (62%), Positives = 251/336 (74%), Gaps = 54/336 (16%)
Query: 1 MKSVQRKVQAGKLNVNEDDPFELFVASTNIRYTYYSETHKILGNTYGMCVLQDFEALTPN 60
M+ +Q+K+++G LN+ +DDPFELFVA+TNIRY YY+ETHKILGNT+GMCVLQDFEALTPN
Sbjct: 73 MRQLQKKIKSGTLNLKQDDPFELFVAATNIRYCYYNETHKILGNTFGMCVLQDFEALTPN 132
Query: 61 LLARTIETVEGGGVIVLLLRTLSSLKQLYTMSMDIHERYRTEAHSDVVCRFNERFLLSLS 120
LLART+ETVEGGG++V+LLRT++SLKQLYTM+MD+H RYRTEAH DVV RFNERF+LSL+
Sbjct: 133 LLARTVETVEGGGLVVILLRTMNSLKQLYTMTMDVHSRYRTEAHQDVVGRFNERFILSLA 192
Query: 121 SCNRCLVVDDQLTVLPITSQHVLNI---TPVSKTSDLSQQEQELNALKTSLKDTQPVSAL 177
SC +CLV+DDQL +LPI+S HV +I P + +LS EL LK SL+DTQPV L
Sbjct: 193 SCKKCLVIDDQLDILPISS-HVASIEALPPQAPDENLSPAALELLELKESLQDTQPVGVL 251
Query: 178 IDCCKTLDQGKALLKFIDSISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFG 237
+DCCKTLDQ KA+LKFI+ ISEKTLRSTV+LTAARGRGKSAALGLA+AGAVAFGYSNIF
Sbjct: 252 VDCCKTLDQAKAVLKFIEGISEKTLRSTVALTAARGRGKSAALGLAIAGAVAFGYSNIF- 310
Query: 238 KALLKFIDGISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNT 297
VTSPSP+NL+T
Sbjct: 311 -------------------------------------------------VTSPSPDNLHT 321
Query: 298 FFQFIFKGFDALAYQEHLDYSIVQSTEPEYNKALVR 333
F+F+FKGFDAL YQEHLDY IVQS PE+NKA++R
Sbjct: 322 LFEFVFKGFDALQYQEHLDYEIVQSLNPEFNKAVIR 357
>sp|P53914|KRE33_YEAST UPF0202 protein KRE33 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=KRE33 PE=1 SV=1
Length = 1056
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/330 (54%), Positives = 226/330 (68%), Gaps = 50/330 (15%)
Query: 4 VQRKVQAGKLNVNEDDPFELFVASTNIRYTYYSETHKILGNTYGMCVLQDFEALTPNLLA 63
++++++ G VNE DPFE F+++ NIRY YY E+ KILGNTYGMC+LQDFEALTPNLLA
Sbjct: 77 IKKEIKRGTREVNEMDPFESFISNQNIRYVYYKESEKILGNTYGMCILQDFEALTPNLLA 136
Query: 64 RTIETVEGGGVIVLLLRTLSSLKQLYTMSMDIHERYRTEAHSDVVCRFNERFLLSLSSCN 123
RTIETVEGGG++V+LL+++SSLKQLYTM+MD+H RYRTEAH DVV RFNERF+LSL S
Sbjct: 137 RTIETVEGGGIVVILLKSMSSLKQLYTMTMDVHARYRTEAHGDVVARFNERFILSLGSNP 196
Query: 124 RCLVVDDQLTVLPITSQHVLNITPVSKTSDLSQQEQELNALKTSLKDTQPVSALIDCCKT 183
CLVVDD+L VLP++ + P + +L ++ EL LK SL+D QP +L+ KT
Sbjct: 197 NCLVVDDELNVLPLSGAKNVKPLPPKEDDELPPKQLELQELKESLEDVQPAGSLVSLSKT 256
Query: 184 LDQGKALLKFIDSISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFGKALLKF 243
++Q A+L FID+ISEKTL TV+LTA RGRGKSAALG+++A AV+ GYSNIF
Sbjct: 257 VNQAHAILSFIDAISEKTLNFTVALTAGRGRGKSAALGISIAAAVSHGYSNIF------- 309
Query: 244 IDGISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIF 303
VTSPSPENL T F+FIF
Sbjct: 310 -------------------------------------------VTSPSPENLKTLFEFIF 326
Query: 304 KGFDALAYQEHLDYSIVQSTEPEYNKALVR 333
KGFDAL YQEH+DY I+QST P++NKA+VR
Sbjct: 327 KGFDALGYQEHIDYDIIQSTNPDFNKAIVR 356
>sp|Q55EJ3|NAT10_DICDI N-acetyltransferase 10 homolog OS=Dictyostelium discoideum GN=nat10
PE=3 SV=1
Length = 1057
Score = 354 bits (909), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 179/321 (55%), Positives = 225/321 (70%), Gaps = 55/321 (17%)
Query: 15 VNEDDPFELFVASTNIRYTYYSETHKILGNTYGMCVLQDFEALTPNLLARTIETVEGGGV 74
VN++DPF++F+++TNIRY+YYSE+HKILGNT+GM VLQDFEA+TPNLLARTIETVEGGG+
Sbjct: 87 VNQEDPFDVFISTTNIRYSYYSESHKILGNTFGMLVLQDFEAITPNLLARTIETVEGGGL 146
Query: 75 IVLLLRTLSSLKQLYTMSMDIHERYRTE-AHSDVVCRFNERFLLSLSSCNRCLVVDDQLT 133
IVLLL+T+ SLKQLYTM+MD+H R+R+E + +VVCRFNERFLLSL +CLV+DD+L
Sbjct: 147 IVLLLKTMDSLKQLYTMTMDVHTRFRSENSKGEVVCRFNERFLLSLGKSEQCLVMDDELN 206
Query: 134 VLPITSQHVLNITPVSKTSDLSQQEQ-ELNALKTSLKDTQPVSALIDCCKTLDQGKALLK 192
+LPI+SQ + + +K L EQ EL K +KDT ALI+ KT+DQ ALL
Sbjct: 207 ILPISSQ---SRSIEAKQQILETPEQVELREFKQQVKDTDIAGALIENTKTMDQATALLT 263
Query: 193 FIDSISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFGKALLKFIDGISEKTL 252
FIDSISEKTLRSTV+LTA RGRGKSAALGLA++ AVAFGYSNIF
Sbjct: 264 FIDSISEKTLRSTVTLTAGRGRGKSAALGLAISAAVAFGYSNIF---------------- 307
Query: 253 RSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFKGFDALAYQ 312
V+SP+PENLNT FQF+FKGFD++ Y
Sbjct: 308 ----------------------------------VSSPTPENLNTLFQFVFKGFDSMEYV 333
Query: 313 EHLDYSIVQSTEPEYNKALVR 333
EH+DY +V+ST PE++ A++R
Sbjct: 334 EHVDYELVKSTNPEFHDAIIR 354
>sp|Q9W3C1|U202_DROME Polycomb protein l(1)G0020 OS=Drosophila melanogaster GN=l(1)G0020
PE=1 SV=2
Length = 1008
Score = 342 bits (878), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/333 (51%), Positives = 219/333 (65%), Gaps = 52/333 (15%)
Query: 2 KSVQRKVQAGKLNVNEDDPFELFVASTNIRYTYYSETHKILGNTYGMCVLQDFEALTPNL 61
K +K+ GK++VNE D F+ F +T I YYSETH +LG TYG+CVLQDFEALTPNL
Sbjct: 71 KKRAKKIAVGKVDVNEADLFDSFRVATTIHGRYYSETHAVLGRTYGVCVLQDFEALTPNL 130
Query: 62 LARTIETVEGGGVIVLLLRTLSSLKQLYTMSMDIHERYRTEAHSDVVCRFNERFLLSLSS 121
LART+ETVEGGG+I+LLL+TL SLKQLYTMSMD+H+R+RTEAH V CRFNER +LSL+
Sbjct: 131 LARTVETVEGGGLIILLLKTLQSLKQLYTMSMDVHKRFRTEAHQTVTCRFNERLILSLAD 190
Query: 122 CNRCLVVDDQLTVLPITSQHVLNITPVSKT-SDLSQQEQELNALKTSLKDTQPVSALIDC 180
C RCLVV+D LTVLP++S+ +N+ PV+ + S E L LK SL QP AL++
Sbjct: 191 CKRCLVVNDDLTVLPLSSK-TINVEPVNPAGAGRSPNEASLKELKESLLTVQPAGALVNL 249
Query: 181 CKTLDQGKALLKFIDSISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFGKAL 240
CKT DQ A+ +FI+++ +K L+ +SLTAARGRGKSAALGL++A AVAFGY NI
Sbjct: 250 CKTYDQANAVAQFIEALVDKQLKPPMSLTAARGRGKSAALGLSIAAAVAFGYVNI----- 304
Query: 241 LKFIDGISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQ 300
+VTSP PENL T F+
Sbjct: 305 ---------------------------------------------YVTSPHPENLITLFE 319
Query: 301 FIFKGFDALAYQEHLDYSIVQSTEPEYNKALVR 333
F+ KGFDAL YQEH DY+I++ST +Y KA++R
Sbjct: 320 FVLKGFDALEYQEHADYTIIRSTNADYKKAIIR 352
>sp|P87115|YDK9_SCHPO UPF0202 protein C20G8.09c OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPAC20G8.09c PE=3 SV=1
Length = 1033
Score = 335 bits (859), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 179/330 (54%), Positives = 218/330 (66%), Gaps = 51/330 (15%)
Query: 4 VQRKVQAGKLNVNEDDPFELFVASTNIRYTYYSETHKILGNTYGMCVLQDFEALTPNLLA 63
++++++ G + N +DPFELF + TNIRY YY E+ KILG TYGM VLQDFEALTPNLLA
Sbjct: 77 IKKEIKRGIRDPNSEDPFELFCSITNIRYCYYKESEKILGQTYGMLVLQDFEALTPNLLA 136
Query: 64 RTIETVEGGGVIVLLLRTLSSLKQLYTMSMDIHERYRTEAHSDVVCRFNERFLLSLSSCN 123
RTIETVEGGG++VLLL L+SLKQLYTMSMDIH RYRTEAHSDV RFNERF+LSL +C
Sbjct: 137 RTIETVEGGGIVVLLLHKLNSLKQLYTMSMDIHSRYRTEAHSDVTARFNERFILSLGNCE 196
Query: 124 RCLVVDDQLTVLPITSQHVLNITPVSKTSDLSQQEQELNALKTSLKDTQPVSALIDCCKT 183
CLV+DD+L VLPI+ + P + D S Q + L+ SL + P AL+ KT
Sbjct: 197 NCLVIDDELNVLPISGGKNVKALPPTLEEDNSTQ-NSIKELQESLGEDHPAGALVGVTKT 255
Query: 184 LDQGKALLKFIDSISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFGKALLKF 243
LDQ +A+L F++SI EK+L+ TVSLTA RGRGKSAALGLA+A A+A GYSNIF
Sbjct: 256 LDQARAVLTFVESIVEKSLKGTVSLTAGRGRGKSAALGLAIAAAIAHGYSNIF------- 308
Query: 244 IDGISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIF 303
+TSPSPENL T F+FIF
Sbjct: 309 -------------------------------------------ITSPSPENLKTLFEFIF 325
Query: 304 KGFDALAYQEHLDYSIVQSTEPEYNKALVR 333
KGFDAL Y+EH+DY I+QST P Y+ A+VR
Sbjct: 326 KGFDALNYEEHVDYDIIQSTNPAYHNAIVR 355
>sp|O01757|YIL8_CAEEL UPF0202 protein F55A12.8 OS=Caenorhabditis elegans GN=F55A12.8 PE=3
SV=1
Length = 1043
Score = 333 bits (853), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 163/317 (51%), Positives = 216/317 (68%), Gaps = 53/317 (16%)
Query: 19 DPFELFVASTNIRYTYYSETHKILGNTYGMCVLQDFEALTPNLLARTIETVEGGGVIVLL 78
DPF++F++ST IRY YY+ET KILGNT+G+ VLQDFEA+TPNLLARTIET+EGGG+++LL
Sbjct: 90 DPFDVFISSTQIRYCYYNETEKILGNTFGVLVLQDFEAMTPNLLARTIETIEGGGMVILL 149
Query: 79 LRTLSSLKQLYTMSMDIHERYRTEAHSDVVCRFNERFLLSLSSCNRCLVVDDQLTVLPIT 138
++++ SL+QLYT+SMD+H RYRTEAH+++ RFNERF+LSL+SC+ LV+DDQL VLPI+
Sbjct: 150 MQSVRSLRQLYTISMDVHNRYRTEAHNEITARFNERFILSLASCSSVLVLDDQLRVLPIS 209
Query: 139 SQHVLNIT--PVSKTSDLSQQEQELNALKTSLKDTQPVSALIDCCKTLDQGKALLKFIDS 196
S H+ N+ P S+ S+ + EL +LK ++K+T+P+ L+ +T Q KALL+F+D
Sbjct: 210 S-HIENVEAIPASQKKIQSESDAELASLKEAMKETKPIGPLLSRARTACQAKALLRFLDV 268
Query: 197 ISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFGKALLKFIDGISEKTLRSTV 256
I+EK T SLTA RGRGKSAA+GL++AGA+AFGY+NIF
Sbjct: 269 ITEKQSNVTCSLTAGRGRGKSAAVGLSLAGAIAFGYTNIF-------------------- 308
Query: 257 SLTAARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFKGFDALAYQEHLD 316
VTSPSPENL T F+F+ KGFDAL YQEH D
Sbjct: 309 ------------------------------VTSPSPENLKTLFEFVVKGFDALDYQEHTD 338
Query: 317 YSIVQSTEPEYNKALVR 333
Y ++QS PE+ LVR
Sbjct: 339 YELIQSANPEFKNCLVR 355
>sp|Q9XIK4|U202A_ARATH UPF0202 protein At1g10490 OS=Arabidopsis thaliana GN=At1g10490 PE=2
SV=2
Length = 1028
Score = 296 bits (757), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/335 (49%), Positives = 225/335 (67%), Gaps = 54/335 (16%)
Query: 2 KSVQRKVQAGKLNVNEDDPFELFVASTNIRYTYYSETHKILGNTYGMCVLQDFEALTPNL 61
K +++ + G+L+ + D F LF+ ++ + Y ++ +ILGNT+G+C+LQDFEALTPNL
Sbjct: 73 KQLKKMKERGQLDPEKLDAFSLFLDVVDVTHCLYKDSERILGNTFGICILQDFEALTPNL 132
Query: 62 LARTIETVEGGGVIVLLLRTLSSLKQLYTMSMDIHERYRTEAHSDVVCRFNERFLLSLSS 121
LARTIETVEGGG++VLLL++L+SL L TM MD+H+R+RTE+HS+ RFNERFLLSL+S
Sbjct: 133 LARTIETVEGGGLVVLLLQSLASLTSLCTMVMDVHDRFRTESHSEASGRFNERFLLSLAS 192
Query: 122 CNRCLVVDDQLTVLPITSQHVLNITPVSKTSD---LSQQEQELNALKTSLKDTQPVSALI 178
C C+V+DD+L +LP++S H+ +IT V D LS+ E++L +LK +L D PV LI
Sbjct: 193 CKACVVMDDELNLLPLSS-HIKSITKVPTKEDSEALSEAERDLKSLKDALNDDFPVGPLI 251
Query: 179 DCCKTLDQGKALLKFIDSISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFGK 238
+ C TLDQGKA++ F D+I +KTLRS V+L A+RGRGKSAALGLAVAGAVA GYSNI
Sbjct: 252 NKCCTLDQGKAVVTFFDAILDKTLRSIVALIASRGRGKSAALGLAVAGAVAAGYSNI--- 308
Query: 239 ALLKFIDGISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTF 298
+VT+PSP+NL T
Sbjct: 309 -----------------------------------------------YVTAPSPDNLKTV 321
Query: 299 FQFIFKGFDALAYQEHLDYSIVQSTEPEYNKALVR 333
F+F+ KGFDAL Y+EHL+Y +V+S PE+NKA+VR
Sbjct: 322 FEFVCKGFDALEYKEHLEYDVVRSVNPEFNKAIVR 356
>sp|Q9M2Q4|U202B_ARATH UPF0202 protein At3g57940 OS=Arabidopsis thaliana GN=At3g57940 PE=2
SV=2
Length = 1028
Score = 291 bits (746), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 165/335 (49%), Positives = 221/335 (65%), Gaps = 54/335 (16%)
Query: 2 KSVQRKVQAGKLNVNEDDPFELFVASTNIRYTYYSETHKILGNTYGMCVLQDFEALTPNL 61
K ++R + G+L+ + D F + + + Y ++ +ILGNT+GMC+LQDFEALTPNL
Sbjct: 73 KQLKRLRERGQLDPEKLDAFSRLLDVGRVTHCLYKDSERILGNTFGMCILQDFEALTPNL 132
Query: 62 LARTIETVEGGGVIVLLLRTLSSLKQLYTMSMDIHERYRTEAHSDVVCRFNERFLLSLSS 121
LARTIETVEGGG++VL+LR+L+SL L TM MD+H+R+RTE+HS+ RFNERFLLSL+S
Sbjct: 133 LARTIETVEGGGLVVLILRSLTSLTSLCTMVMDVHDRFRTESHSEAAGRFNERFLLSLAS 192
Query: 122 CNRCLVVDDQLTVLPITSQHVLNIT--PVSKTSD-LSQQEQELNALKTSLKDTQPVSALI 178
C C+V+DD+L +LP++S H+ +IT P K S+ LS+ E++L +LK L D PV LI
Sbjct: 193 CKACVVMDDELNILPLSS-HIRSITQVPTEKDSEGLSEAERDLKSLKEDLSDDFPVGPLI 251
Query: 179 DCCKTLDQGKALLKFIDSISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFGK 238
C TLDQGKA++ F D+I +K LRS V+L A+RGRGKSAALGLAVAGAVA GYSNI
Sbjct: 252 KKCCTLDQGKAVVTFFDAILDKALRSIVALIASRGRGKSAALGLAVAGAVAAGYSNI--- 308
Query: 239 ALLKFIDGISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTF 298
++T+PSP+NL TF
Sbjct: 309 -----------------------------------------------YITAPSPDNLKTF 321
Query: 299 FQFIFKGFDALAYQEHLDYSIVQSTEPEYNKALVR 333
F+F+ KGFDAL Y+EHLDY +V+S P++ KA+VR
Sbjct: 322 FEFVCKGFDALEYKEHLDYDVVKSANPDFKKAVVR 356
>sp|Q8TYZ5|TMCA_METKA Putative tRNA(Met) cytidine acetyltransferase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0146 PE=3 SV=1
Length = 855
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 32/220 (14%)
Query: 21 FELFVASTNIRYTY----YSETHKILGNTYGMCVLQDFEALTPNLLARTIETVEGGGVIV 76
E F N Y +S + + LG T+ + V+ L P+ + R +ETV GGG+++
Sbjct: 100 LEGFAEEANFEYELEALTFSGSKRALGTTWDLMVIDLSYDLDPDAIGRLVETVRGGGLVI 159
Query: 77 LLLRTLSSLKQLYTMSMDIHERYRTEAHS--DVVCRFNERFLLSLSSCNRCLVVD-DQLT 133
+ ++T H+ T ++ V RFN RF+ L + +VD D+ T
Sbjct: 160 FQTPPFDRWRNMWTA---FHKSLVTPPYTLDHVGKRFNRRFIRKLKEHDGVWIVDTDEWT 216
Query: 134 VLPITSQHVLNITPVSKTSDLSQQEQELNALKTSLKDTQPVS------ALIDCCKTLDQG 187
P S+ V DL E+ + D P L C T DQ
Sbjct: 217 AEPEPSEDV----------DL-----EVEVKRRERPDLDPPDDAVLPEELYRMCATEDQF 261
Query: 188 KALLKFIDSISEKTLRSTVSLTAARGRGKSAALGLAVAGA 227
+AL++F + + E ++ + LTA RGRGKSA LG+AVAGA
Sbjct: 262 RALIRF-EELLESNGKTALILTADRGRGKSALLGIAVAGA 300
>sp|Q9UZ78|TMCA_PYRAB Putative tRNA(Met) cytidine acetyltransferase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB12760 PE=3 SV=1
Length = 817
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 22/201 (10%)
Query: 28 TNIRYTYYSETHKILGNTYGMCVLQDFEALTPNLLARTIETVEGGGVIVLLLRTLSSLKQ 87
T++ + Y + ILG T+ + VL +PN L R IETV GGG+I +L K
Sbjct: 122 TSVTFKY---SRDILGRTFDILVLDLSYDYSPNDLGRIIETVRGGGLIFILTNPFEKWKD 178
Query: 88 LYTMSMDIHERYRTEAHS--DVVCRFNERFLLSLSSCNRCLVVDDQLTVLPITSQHVLNI 145
++T H+ T ++ DV RFN R + + +VD + +
Sbjct: 179 MWT---GFHKSLVTPPYTIDDVKKRFNRRLIRKFTEHKGIYIVD--------ADKKKIER 227
Query: 146 TPVSKTSDLSQQEQELNALKTSLKDTQPVSALIDCCKTLDQGKALLKFIDSISEKTLRST 205
P S E+E + +K + L + C T Q + L D I +
Sbjct: 228 RPRKNKSQAKLPEREKVEIPRDIKFPR---ELYELCLTRGQVEVLKALEDLIENPGM--- 281
Query: 206 VSLTAARGRGKSAALGLAVAG 226
V LTA RGRGKS ++G+A G
Sbjct: 282 VVLTADRGRGKSVSVGIASIG 302
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 256 VSLTAARGRGKSAALGLAVAG-AVAFGYSN--IFVTSPSPENLNTFFQFIFKGFDALAYQ 312
V LTA RGRGKS ++G+A G A+ N I VT+P EN+ + +F + L Y+
Sbjct: 282 VVLTADRGRGKSVSVGIASIGLAITSKKKNFRIVVTAPELENVQSLLKFAERSLKVLGYK 341
>sp|C3N792|TMCA_SULIY Putative tRNA(Met) cytidine acetyltransferase OS=Sulfolobus
islandicus (strain Y.G.57.14 / Yellowstone #1)
GN=YG5714_1830 PE=3 SV=1
Length = 743
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 108/284 (38%), Gaps = 95/284 (33%)
Query: 35 YSETHKILGNTYGMCVLQDFEALTPNLLARTIETVEGGGVIVL----LLRTLSSLKQLYT 90
YS + K LG + + +L PN +AR ++ +GGG+ ++ +LR +LY
Sbjct: 91 YSNSEKYLGQSVDLVILDAIGDFRPNYIARFVDMTKGGGMAIIYSDDILRG-----KLYK 145
Query: 91 MSMDIHERYRTEAHSDVVCRFNERFLLSLSSCNRCLVV--DDQLTVLPITSQHVL-NITP 147
S+ VV ER + L+ R ++ D+LT P +S +
Sbjct: 146 ESL---------TRDGVVKDLFERRFMELAKRYRGIIFLQGDRLTFTPYSSNETHKSHKK 196
Query: 148 VSKTSDLSQQEQELNALKTSLKDTQPVSALIDCCKTLDQGKALLK--FIDSISEKTLRST 205
+ K+ + Q EL C + DQ K L + FI S ++ L
Sbjct: 197 IPKSPKVPMQLHEL-------------------CLSSDQNKVLEESLFITSPGKRVL--- 234
Query: 206 VSLTAARGRGKSAALGLAVAGAVAFGYSNIFGKALLKFIDGISEKTLRSTVSLTAARGRG 265
+TAARGRGKSA++GL ++ + EK
Sbjct: 235 -VVTAARGRGKSASIGLFLSYLMT------------------EEK--------------- 260
Query: 266 KSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFKGFDAL 309
FG NI VTSP+ + F F+ KG DAL
Sbjct: 261 --------------FG--NILVTSPTYYSSQEIFNFVIKGLDAL 288
>sp|A1RY08|TMCA_THEPD Putative tRNA(Met) cytidine acetyltransferase OS=Thermofilum
pendens (strain Hrk 5) GN=Tpen_0686 PE=3 SV=1
Length = 801
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 29 NIRYTYYSETHKILGNTYGMCVLQDFEALTPNLLARTIETVEGGGVIVLLLRTLSSLKQL 88
++ Y Y + ++LG TY V L PN L R + VEGGG+ + LL + + L +
Sbjct: 85 SVDYVSYHKLDEVLGRTYAAAVADLVNNLEPNDLGRVMGVVEGGGLYIFLLPSFTRLLET 144
Query: 89 YTMSMDIHERYRTE------AHSDVVCRFNERFLLSLSSCNRCLVVDDQLTVLPITSQHV 142
T R+++ D+ F +RF+ + ++ + V D +
Sbjct: 145 VT-------RFQSNLIVPGYTDKDLKRYFEKRFIKKVME-HQGVAVYDADNRYWVKKFGK 196
Query: 143 LNITPVSKTSDLSQQEQELNALKTSLKDTQPVSALIDCCKTLDQGKALLKFIDSISEKTL 202
TP ++ + Q+ ++ PV + + T DQ + +LK + K
Sbjct: 197 TPSTPYARPKPVLPQKSKI-----------PVK-VFNLALTQDQVE-VLKIFEHFYAKAE 243
Query: 203 RSTV--SLTAARGRGKSAALGLAVA 225
+ + LTA RGRGKS+A+GL V
Sbjct: 244 KEKLVFVLTADRGRGKSSAVGLGVG 268
Score = 38.1 bits (87), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 258 LTAARGRGKSAALGLAVAGAV-----AFGYSNIFVTSPSPENLNTFFQF 301
LTA RGRGKS+A+GL V A G + VT+P+ N+ F+F
Sbjct: 251 LTADRGRGKSSAVGLGVGWLAHRLRRAKGKCKVVVTAPAVTNVQEVFRF 299
>sp|D5C1K8|TMCA_NITHN tRNA(Met) cytidine acetyltransferase TmcA OS=Nitrosococcus
halophilus (strain Nc4) GN=tmcA PE=3 SV=1
Length = 746
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 173 PVSALIDCCKTLDQGKALLKFIDSISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGY 232
P S C+T DQG+A+ + ++ + R V LT+ RGRGKSAALG+A A + G
Sbjct: 189 PPSPGDSACRTEDQGRAVEAIVKVVTGQRRRPVV-LTSDRGRGKSAALGIAAARLLQRGL 247
Query: 233 SNIF 236
+I
Sbjct: 248 KHII 251
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 238 KALLKFIDGISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNT 297
+A++K + G R V LT+ RGRGKSAALG+A A + G +I VT P + +
Sbjct: 207 EAIVKVVTG----QRRRPVVLTSDRGRGKSAALGIAAARLLQRGLKHIIVTGPRLDAVEP 262
Query: 298 FFQ 300
F+
Sbjct: 263 VFR 265
>sp|Q5V5M5|TMCA_HALMA Putative tRNA(Met) cytidine acetyltransferase OS=Haloarcula
marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 /
VKM B-1809) GN=rrnAC0101 PE=3 SV=1
Length = 775
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 77/187 (41%), Gaps = 25/187 (13%)
Query: 36 SETHKILGNTYGMCVLQDFEALTPNLLARTIETVEGGGVIVLL---LRTLSSLKQLYTMS 92
S ++LG T V E L P+ + RT+ V+GGG+ VLL L T + + S
Sbjct: 94 SRAEELLGRTRTAVVFDAHEELRPDAVGRTVGAVDGGGLYVLLAPPLETWPEERDGFDAS 153
Query: 93 MDIHERYRTEAHSDVVCRFNERFLLSLSSCNRCLVVD-DQLTVLPITSQHVLNITPVSKT 151
+ + + E DV F RF+ +L + +VD D+ TV +T +
Sbjct: 154 LAVPP-FGVE---DVSGHFRRRFVETLRAHRGIAIVDVDRGTV------EQDGLTDPPPS 203
Query: 152 SDLSQQEQELNALKTSLKDTQPVSALIDCCKTLDQGKALLKFIDSISEKTLRSTVSLTAA 211
+ +A S Q C T DQ A+ F S +T V + A
Sbjct: 204 RPVPSPTPPTDAWFRSETYAQ--------CLTDDQRDAVQAF---ESLQTAGEAVVVEAD 252
Query: 212 RGRGKSA 218
RGRGKS+
Sbjct: 253 RGRGKSS 259
>sp|Q9KKJ5|TMCA_VIBCH tRNA(Met) cytidine acetyltransferase TmcA OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=tmcA PE=3 SV=1
Length = 708
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 239 ALLKFIDGISEKTLRSTVSLTAARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTF 298
+++K + G ++ L LTA RGRGK++ALGLA A ++ +I VT+P+ +
Sbjct: 195 SIIKVVTGHRKRPL----VLTADRGRGKTSALGLAAAELMSSRSMHIVVTAPTLAAVEPL 250
Query: 299 F 299
F
Sbjct: 251 F 251
>sp|Q5FPS8|GPDA_GLUOX Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Gluconobacter
oxydans (strain 621H) GN=gpsA PE=3 SV=1
Length = 324
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 136 PITSQHVLNITPVSKTSDLSQQEQELNALKTSLKDTQPVSALIDCCKTLDQGKALLKFID 195
P T+ VL +TPV D+S + L+T L PV + CCK L+Q +LL D
Sbjct: 64 PRTANVVLLVTPVQTARDVSTR------LQTVLDPAVPV---VTCCKGLEQATSLLPL-D 113
Query: 196 SISE 199
++E
Sbjct: 114 VLAE 117
>sp|P44140|TMCA_HAEIN tRNA(Met) cytidine acetyltransferase TmcA OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=tmcA PE=5
SV=2
Length = 656
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 258 LTAARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFKGFDALAYQEHLDY 317
LTA RGRGKSA LG+ +A + + +++T+P+ +++ +F + +A E
Sbjct: 162 LTAKRGRGKSALLGM-LANQIQ---APVYLTAPNKSAVHSVIEFSEGDIEFIAPDE---L 214
Query: 318 SIVQSTEPEYNKA 330
++ TEPE++++
Sbjct: 215 ALTLQTEPEFSQS 227
>sp|Q5QY69|TMCA_IDILO tRNA(Met) cytidine acetyltransferase TmcA OS=Idiomarina loihiensis
(strain ATCC BAA-735 / DSM 15497 / L2-TR) GN=tmcA PE=3
SV=1
Length = 612
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 258 LTAARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQ 300
+TA RGRGKS LG A+A A + +I VT+P N Q
Sbjct: 156 ITAERGRGKSTLLGQALAQAKE--HRSIIVTAPRKANAKVLLQ 196
>sp|P36966|PEX6_YARLI Peroxisomal biogenesis factor 6 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=PEX6 PE=3 SV=2
Length = 1024
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Query: 134 VLPITSQHVLNITPVSKTSDLSQQEQELNALKTSLKDTQPV---------SALIDCCKTL 184
V P+T +H + P S+ L+ EQ L AL+ L +PV + C+ +
Sbjct: 89 VNPVTIEHAIVTVPASQYETLNTPEQVLKALEPQLDKDRPVIRQGDVLLNGCRVRLCEPV 148
Query: 185 DQGKAL 190
+QGK +
Sbjct: 149 NQGKVV 154
>sp|C4LGQ3|GLPK_CORK4 Glycerol kinase OS=Corynebacterium kroppenstedtii (strain DSM 44385
/ CCUG 35717) GN=glpK PE=3 SV=1
Length = 512
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 162 NALKTSLKDTQPVSALIDCCKTLDQGKALLKFI-DSISE-KTLRSTVSLTAARGRGKSAA 219
NA +TSL D + + D CK +D +++L I SI + +T+R+ SL RG
Sbjct: 193 NASRTSLMDLKTLKWDEDLCKAMDIPQSMLPEIRPSIGDFRTVRARGSLAGVPIRGVLGD 252
Query: 220 LGLAVAGAVAFGYS---NIFGKALLKFIDGISEKTLRSTVSLTAARGRGKSAALGLAVAG 276
A+ G FG N +G L ++ ++ +T + ++ A+ G
Sbjct: 253 QQAAMFGQCCFGNGDAKNTYGTGLFMLLNTGAKPKWSDNGLITTVCYQIENQKPVYALEG 312
Query: 277 AVAFGYS---------NIFVTSPSPENL 295
+VA G S + +PS EN+
Sbjct: 313 SVAMGGSLVQWLRDNLQLIPNAPSVENM 340
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,439,062
Number of Sequences: 539616
Number of extensions: 4133741
Number of successful extensions: 13339
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 13282
Number of HSP's gapped (non-prelim): 52
length of query: 333
length of database: 191,569,459
effective HSP length: 118
effective length of query: 215
effective length of database: 127,894,771
effective search space: 27497375765
effective search space used: 27497375765
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)