RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy18105
(333 letters)
>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 329
Score = 30.6 bits (67), Expect = 0.28
Identities = 9/76 (11%), Positives = 17/76 (22%), Gaps = 4/76 (5%)
Query: 210 AARGRGKSAALGLAVAGA-VAFGYSNIFGKALLKFIDGISEKTLRSTVSLTAARGRGKSA 268
G G A L+ + FG F+ + + + +
Sbjct: 12 DTNGYGWGIAKELSKRNVKIIFGIWP---PVYNIFMKNYKNGKFDNDMIIDKDKKMNILD 68
Query: 269 ALGLAVAGAVAFGYSN 284
L + A
Sbjct: 69 MLPFDASFDTANDIDE 84
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase
{Streptomyces coelicolor [TaxId: 1902]}
Length = 257
Score = 28.1 bits (62), Expect = 1.5
Identities = 13/54 (24%), Positives = 19/54 (35%), Gaps = 7/54 (12%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFK-GFDALAYQ 312
A G G A L G +FV + E L T + + + G +A
Sbjct: 10 ATSGIGLEIARRLGKEGL------RVFVCARGEEGLRTTLKELREAGVEADGRT 57
>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase
{Lactobacillus brevis [TaxId: 1580]}
Length = 251
Score = 27.7 bits (61), Expect = 1.7
Identities = 7/53 (13%), Positives = 14/53 (26%), Gaps = 6/53 (11%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFKGFDALAYQ 312
G G + A GA + +T + + + +Q
Sbjct: 14 GTLGIGLAIATKFVEEGA------KVMITGRHSDVGEKAAKSVGTPDQIQFFQ 60
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter
oxydans [TaxId: 442]}
Length = 260
Score = 27.8 bits (61), Expect = 1.7
Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 7/54 (12%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIF-KGFDALAYQ 312
A G + AL LA G I + + E L + KG +A +Y
Sbjct: 13 AGGNIGLATALRLAEEGT------AIALLDMNREALEKAEASVREKGVEARSYV 60
>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Leishmania major [TaxId: 5664]}
Length = 284
Score = 27.7 bits (60), Expect = 1.7
Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 210 AARGRGKSAALGLAVAGA-VAFGYSN 234
AA+ G+S A GL G V Y
Sbjct: 10 AAKRLGRSIAEGLHAEGYAVCLHYHR 35
Score = 27.7 bits (60), Expect = 1.7
Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 260 AARGRGKSAALGLAVAGA-VAFGYSN 284
AA+ G+S A GL G V Y
Sbjct: 10 AAKRLGRSIAEGLHAEGYAVCLHYHR 35
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase
{Escherichia coli [TaxId: 562]}
Length = 255
Score = 27.7 bits (61), Expect = 1.8
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 7/54 (12%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFK-GFDALAYQ 312
A G GK A+ A AGA ++ V+ + + N I + G A A +
Sbjct: 19 AGAGIGKEIAITFATAGA------SVVVSDINADAANHVVDEIQQLGGQAFACR 66
Score = 25.8 bits (56), Expect = 8.5
Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 210 AARGRGKSAALGLAVAGA-VAFGYSN 234
A G GK A+ A AGA V N
Sbjct: 19 AGAGIGKEIAITFATAGASVVVSDIN 44
>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase
{Chlorobium tepidum [TaxId: 1097]}
Length = 240
Score = 27.4 bits (60), Expect = 2.0
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 260 AARGRGKSAALGLAVAGA-VAFGYSNIFVTSPSPENLN 296
A +G G++ AL A A + ++S + +L
Sbjct: 9 AGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLE 46
Score = 26.2 bits (57), Expect = 5.0
Identities = 10/55 (18%), Positives = 17/55 (30%), Gaps = 6/55 (10%)
Query: 210 AARGRGKSAALGLAVAGAVAFGYSNIFGKALLKFIDGISEKTLRSTVSLTAARGR 264
A +G G++ AL A A + + + + L A G
Sbjct: 9 AGKGIGRAIALEFARAAR------HHPDFEPVLVLSSRTAADLEKISLECRAEGA 57
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase
{Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 251
Score = 27.3 bits (60), Expect = 2.4
Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFK-GFDALAYQ 312
A RG G+ A LA + + ++ S + ++ ++ I G+++ Y
Sbjct: 18 AGRGIGREIAKMLAKSVS------HVICISRTQKSCDSVVDEIKSFGYESSGYA 65
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella
pneumoniae [TaxId: 573]}
Length = 255
Score = 27.5 bits (60), Expect = 2.5
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 7/54 (12%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFK-GFDALAYQ 312
A +G GK+ AL L G + + + I + G A+A +
Sbjct: 9 AGQGIGKAIALRLVKDGF------AVAIADYNDATAKAVASEINQAGGHAVAVK 56
>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 252
Score = 26.9 bits (59), Expect = 3.0
Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 7/44 (15%)
Query: 254 STVSLT-AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLN 296
ST +T G +AL L+ AG + S + +
Sbjct: 1 STAIVTNVKHFGGMGSALRLSEAGH------TVACHDESFKQKD 38
Score = 26.9 bits (59), Expect = 3.7
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 204 STVSLT-AARGRGKSAALGLAVAGA-VAFGYSN 234
ST +T G +AL L+ AG VA +
Sbjct: 1 STAIVTNVKHFGGMGSALRLSEAGHTVACHDES 33
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Escherichia coli [TaxId: 562]}
Length = 243
Score = 27.0 bits (59), Expect = 3.1
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFKGFDALAY 311
A+RG G++ A LA GA + T+ S ++ L
Sbjct: 12 ASRGIGRAIAETLAARGA------KVIGTATSENGAQAISDYLGANGKGLML 57
>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Trypanosoma cruzi [TaxId: 5693]}
Length = 266
Score = 27.2 bits (59), Expect = 3.1
Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 9/105 (8%)
Query: 210 AARGRGKSAALGLAVAGA-VAFGYSNIFGKA-----LLKFIDGISEKTLRSTVSLTAARG 263
AR G S A+ L G V Y + G A L S + +SL+++
Sbjct: 9 GARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLL 68
Query: 264 RGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFKGFDA 308
+ + AFG ++ V + S A
Sbjct: 69 DCCEDIIDCSFR---AFGRCDVLVNNASAYYPTPLLPGDDTNGAA 110
>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus
thermophilus [TaxId: 274]}
Length = 248
Score = 26.7 bits (59), Expect = 3.5
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 210 AARGRGKSAALGLAVAGA-VAFGYSNIFGKALLKFIDGI 247
ARG G++ A A GA VA GK + + I G
Sbjct: 13 GARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGA 51
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima
[TaxId: 2336]}
Length = 251
Score = 26.5 bits (58), Expect = 3.7
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFK--GFDALAYQ 312
+RG G A GLA AG ++ V S + E + Q + + G + +A++
Sbjct: 13 GSRGLGFGIAQGLAEAGC------SVVVASRNLEEASEAAQKLTEKYGVETMAFR 61
Score = 26.2 bits (57), Expect = 6.0
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 210 AARGRGKSAALGLAVAGA-VAFGYSNIFGKALLKFIDGISEKTLRSTVSLTA 260
+RG G A GLA AG V N+ + + ++EK T++
Sbjct: 13 GSRGLGFGIAQGLAEAGCSVVVASRNL--EEASEAAQKLTEKYGVETMAFRC 62
>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 269
Score = 26.6 bits (58), Expect = 4.1
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLN 296
A++G G+ A LA GA ++ VT+ S E L
Sbjct: 22 ASKGIGREMAYHLAKMGA------HVVVTARSKETLQ 52
>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR,
naphtol reductase) {Rice blast fungus (Magnaporthe
grisea) [TaxId: 148305]}
Length = 272
Score = 26.6 bits (58), Expect = 4.4
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 210 AARGRGKSAALGLAVAGA-VAFGYSN 234
A RG G+ A+ L G V Y+N
Sbjct: 26 AGRGIGREMAMELGRRGCKVIVNYAN 51
Score = 26.6 bits (58), Expect = 4.4
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 260 AARGRGKSAALGLAVAGA-VAFGYSN 284
A RG G+ A+ L G V Y+N
Sbjct: 26 AGRGIGREMAMELGRRGCKVIVNYAN 51
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 297
Score = 26.6 bits (58), Expect = 4.9
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 6/37 (16%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLN 296
A G GK+ L G+ N+ + S E L
Sbjct: 20 GATGIGKAIVKELLELGS------NVVIASRKLERLK 50
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus
bisporus) [TaxId: 5341]}
Length = 260
Score = 26.2 bits (57), Expect = 5.3
Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 8/55 (14%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFK--GFDALAYQ 312
RG G + +A AGA N+ V S + + + K G AYQ
Sbjct: 17 GNRGIGLAFTRAVAAAGA------NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65
Score = 25.4 bits (55), Expect = 9.3
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 210 AARGRGKSAALGLAVAGA-VAFGYSN 234
RG G + +A AGA VA Y +
Sbjct: 17 GNRGIGLAFTRAVAAAGANVAVIYRS 42
>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer
{Caenorhabditis elegans [TaxId: 6239]}
Length = 250
Score = 26.4 bits (57), Expect = 5.6
Identities = 11/57 (19%), Positives = 16/57 (28%), Gaps = 5/57 (8%)
Query: 255 TVSLT-AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFKGFDALA 310
+V +T A RG G L + +I T+ E L
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIR----HIIATARDVEKATELKSIKDSRVHVLP 57
>d1ldja3 e.40.1.1 (A:411-686) Cullin homolog 1, cul-1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 276
Score = 26.1 bits (57), Expect = 6.0
Identities = 12/94 (12%), Positives = 30/94 (31%), Gaps = 10/94 (10%)
Query: 27 STNIRYTYYSETHKILGNTYGMCVL---QDFEALTPNLLARTIETVEGGGVIVLLLRTLS 83
+ + + + +T+ M +L +A T L + + +L + L
Sbjct: 177 KGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMD-----ILAQVLQ 231
Query: 84 SL--KQLYTMSMDIHERYRTEAHSDVVCRFNERF 115
L +L + + E D + + +
Sbjct: 232 ILLKSKLLVLEDENANVDEVELKPDTLIKLYLGY 265
>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil
seed rape (Brassica napus) [TaxId: 3708]}
Length = 244
Score = 25.8 bits (56), Expect = 6.4
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 210 AARGRGKSAALGLAVAGA-VAFGYSN 234
A+RG GK+ AL L AG V Y+
Sbjct: 9 ASRGIGKAIALSLGKAGCKVLVNYAR 34
Score = 25.8 bits (56), Expect = 6.4
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 260 AARGRGKSAALGLAVAGA-VAFGYSN 284
A+RG GK+ AL L AG V Y+
Sbjct: 9 ASRGIGKAIALSLGKAGCKVLVNYAR 34
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 259
Score = 26.1 bits (57), Expect = 6.5
Identities = 11/54 (20%), Positives = 15/54 (27%), Gaps = 7/54 (12%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIF-KGFDALAYQ 312
+G G + A GA I + + LN KGF
Sbjct: 16 GTKGIGHAIVEEFAGFGA------VIHTCARNEYELNECLSKWQKKGFQVTGSV 63
>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 272
Score = 26.1 bits (57), Expect = 6.6
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLN 296
++ G G++ A+ A GA N+ +T S E L
Sbjct: 13 SSNGIGRTTAILFAQEGA------NVTITGRSSERLE 43
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura
stramonium), II [TaxId: 4076]}
Length = 259
Score = 25.7 bits (56), Expect = 7.0
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLN 296
+RG G LA GA +++ S + + LN
Sbjct: 16 GSRGIGYGIVEELASLGA------SVYTCSRNQKELN 46
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura
stramonium), I [TaxId: 4076]}
Length = 258
Score = 25.8 bits (56), Expect = 7.1
Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLN 296
++G G + LA GA ++ S + + L+
Sbjct: 14 GSKGIGYAIVEELAGLGA------RVYTCSRNEKELD 44
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 244
Score = 25.8 bits (56), Expect = 7.2
Identities = 10/26 (38%), Positives = 11/26 (42%), Gaps = 1/26 (3%)
Query: 210 AARGRGKSAALGLAVAGA-VAFGYSN 234
ARG G S + GA V FG
Sbjct: 14 GARGMGASHVRAMVAEGAKVVFGDIL 39
Score = 25.8 bits (56), Expect = 7.2
Identities = 10/26 (38%), Positives = 11/26 (42%), Gaps = 1/26 (3%)
Query: 260 AARGRGKSAALGLAVAGA-VAFGYSN 284
ARG G S + GA V FG
Sbjct: 14 GARGMGASHVRAMVAEGAKVVFGDIL 39
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum
[TaxId: 144185]}
Length = 258
Score = 25.9 bits (56), Expect = 7.4
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 6/37 (16%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLN 296
G G++ A+ LA GA + + S E L
Sbjct: 12 GGSGLGRATAVRLAAEGA------KLSLVDVSSEGLE 42
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 274
Score = 25.8 bits (56), Expect = 7.4
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLN 296
++ G G+SAA+ A GA + +T + + L
Sbjct: 12 SSNGIGRSAAVIFAKEGA------QVTITGRNEDRLE 42
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Thermus thermophilus [TaxId: 274]}
Length = 242
Score = 25.7 bits (56), Expect = 8.3
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 7/107 (6%)
Query: 210 AARGRGKSAALGLAVAGA-VAFGYSNIFGKALLKFIDGISEKTLRSTVSLTAARGRGKSA 268
AA G G++ A GA + L + + + + V+ A+ RG +
Sbjct: 13 AAHGIGRATLELFAKEGARLVACDIE--EGPLREAAEAVGAHPVVMDVADPASVERGFAE 70
Query: 269 AL----GLAVAGAVAFGYSNIFVTSPSPENLNTFFQFIFKGFDALAY 311
AL L A + F E+ + G +A
Sbjct: 71 ALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAK 117
>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 264
Score = 25.7 bits (56), Expect = 8.9
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLN 296
++ G G++ A+ A GA + +T E L
Sbjct: 13 SSNGIGRATAVLFAREGA------KVTITGRHAERLE 43
>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
{Pseudomonas sp., lb400 [TaxId: 306]}
Length = 276
Score = 25.4 bits (55), Expect = 9.9
Identities = 9/37 (24%), Positives = 12/37 (32%), Gaps = 6/37 (16%)
Query: 260 AARGRGKSAALGLAVAGAVAFGYSNIFVTSPSPENLN 296
A G G++ GA + V S E L
Sbjct: 13 GASGLGRALVDRFVAEGA------KVAVLDKSAERLA 43
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.133 0.368
Gapped
Lambda K H
0.267 0.0519 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,101,681
Number of extensions: 47756
Number of successful extensions: 217
Number of sequences better than 10.0: 1
Number of HSP's gapped: 214
Number of HSP's successfully gapped: 44
Length of query: 333
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 247
Effective length of database: 1,226,816
Effective search space: 303023552
Effective search space used: 303023552
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.7 bits)