Query psy18106
Match_columns 76
No_of_seqs 122 out of 922
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 22:41:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18106.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18106hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2daz_A INAD-like protein; PDZ 99.7 3.1E-16 1.1E-20 97.8 7.6 70 7-76 10-79 (124)
2 2awx_A Synapse associated prot 99.5 8.6E-14 2.9E-18 84.2 6.5 57 20-76 1-61 (105)
3 3gge_A PDZ domain-containing p 99.5 7.6E-14 2.6E-18 85.6 6.2 55 19-76 2-56 (95)
4 2d92_A INAD-like protein; PDZ 99.5 1.1E-13 3.8E-18 84.3 5.9 61 16-76 9-72 (108)
5 1wi4_A Synip, syntaxin binding 99.4 2E-13 6.7E-18 83.8 6.4 57 19-76 12-69 (109)
6 1i16_A Interleukin 16, LCF; cy 99.4 3.2E-13 1.1E-17 85.0 7.2 57 20-76 27-85 (130)
7 2fe5_A Presynaptic protein SAP 99.4 3.7E-13 1.3E-17 79.5 6.9 55 22-76 3-61 (94)
8 2i1n_A Discs, large homolog 3; 99.4 3.2E-13 1.1E-17 81.0 6.7 55 22-76 4-62 (102)
9 2opg_A Multiple PDZ domain pro 99.4 6.3E-13 2.1E-17 79.1 7.1 56 21-76 3-58 (98)
10 2jik_A Synaptojanin-2 binding 99.4 3.8E-13 1.3E-17 80.6 5.9 57 20-76 5-65 (101)
11 1d5g_A Human phosphatase HPTP1 99.4 7.3E-13 2.5E-17 78.6 7.0 57 20-76 3-61 (96)
12 2q9v_A Membrane-associated gua 99.4 6.2E-13 2.1E-17 78.1 6.5 54 22-76 2-55 (90)
13 2fne_A Multiple PDZ domain pro 99.4 1.5E-13 5.2E-18 85.3 4.0 59 18-76 21-81 (117)
14 2byg_A Channel associated prot 99.4 3.5E-13 1.2E-17 83.5 5.7 57 20-76 22-82 (117)
15 1um1_A KIAA1849 protein, RSGI 99.4 8.9E-13 3.1E-17 80.1 7.2 58 19-76 5-64 (110)
16 1ufx_A KIAA1526 protein; PDZ d 99.4 2.9E-13 9.8E-18 82.4 5.0 54 23-76 7-60 (103)
17 1ueq_A Membrane associated gua 99.4 6.6E-13 2.2E-17 82.6 6.7 59 17-76 14-72 (123)
18 1wha_A KIAA0147 protein, scrib 99.4 6.3E-13 2.2E-17 80.3 6.3 57 20-76 5-66 (105)
19 2eno_A Synaptojanin-2-binding 99.4 6.3E-13 2.1E-17 82.1 6.4 57 20-76 15-75 (120)
20 3i4w_A Disks large homolog 4; 99.4 7.6E-13 2.6E-17 79.4 6.2 57 18-76 7-63 (104)
21 1x6d_A Interleukin-16; PDZ dom 99.4 6.4E-13 2.2E-17 81.9 5.7 58 19-76 12-70 (119)
22 2kpk_A Membrane-associated gua 99.4 4.6E-13 1.6E-17 84.0 5.0 63 13-76 9-71 (129)
23 3cbz_A Dishevelled-2; PDZ doma 99.4 4.3E-13 1.5E-17 81.9 4.7 55 22-76 5-61 (108)
24 2db5_A INAD-like protein; PDZ 99.4 5.2E-13 1.8E-17 83.3 5.0 57 20-76 23-82 (128)
25 3b76_A E3 ubiquitin-protein li 99.4 9.1E-13 3.1E-17 82.2 6.1 57 20-76 22-81 (118)
26 2jil_A GRIP1 protein, glutamat 99.4 1.1E-12 3.9E-17 77.8 6.0 55 22-76 3-60 (97)
27 2iwo_A Multiple PDZ domain pro 99.4 3.5E-13 1.2E-17 84.0 3.9 59 18-76 20-81 (120)
28 3o46_A Maguk P55 subfamily mem 99.4 1.7E-12 5.9E-17 76.8 6.1 54 21-76 3-56 (93)
29 1wf8_A Neurabin-I; PDZ domain, 99.4 1.3E-12 4.4E-17 79.2 5.6 56 21-76 8-68 (107)
30 3gsl_A Disks large homolog 4; 99.3 2E-12 6.9E-17 83.8 6.8 55 22-76 5-63 (196)
31 1q7x_A PDZ2B domain of PTP-BAS 99.3 1.5E-12 5.2E-17 78.8 5.8 57 20-76 7-70 (108)
32 2ehr_A INAD-like protein; PDZ 99.3 2.8E-12 9.5E-17 78.8 7.0 56 21-76 14-78 (117)
33 1uhp_A Hypothetical protein KI 99.3 3E-12 1E-16 77.6 7.0 56 21-76 7-69 (107)
34 3axa_A Afadin, nectin-3, prote 99.3 1.4E-12 4.8E-17 78.8 5.5 56 20-76 9-66 (106)
35 2r4h_A Membrane-associated gua 99.3 1.9E-12 6.7E-17 79.3 6.1 56 20-76 22-77 (112)
36 2i04_A Membrane-associated gua 99.3 2.5E-12 8.7E-17 74.7 6.3 52 24-76 2-53 (85)
37 2qg1_A Multiple PDZ domain pro 99.3 2.6E-12 8.9E-17 75.6 6.3 54 21-76 3-57 (92)
38 2dkr_A LIN-7 homolog B; LIN-7B 99.3 1.5E-12 5.2E-17 76.6 5.3 55 21-76 4-58 (93)
39 1uep_A Membrane associated gua 99.3 1.5E-12 5.2E-17 78.5 5.3 54 22-76 9-62 (103)
40 2vwr_A Ligand of NUMB protein 99.3 2.9E-12 1E-16 75.9 6.4 53 22-76 3-57 (95)
41 3r0h_A INAD, inactivation-NO-a 99.3 3E-12 1E-16 84.3 6.9 57 20-76 16-73 (206)
42 1uju_A Scribble; PDZ domain, c 99.3 9.4E-13 3.2E-17 80.3 4.1 59 18-76 5-72 (111)
43 4e34_A Golgi-associated PDZ an 99.3 1.5E-12 5.1E-17 76.0 4.3 55 21-76 1-56 (87)
44 1g9o_A NHE-RF; PDZ domain, com 99.3 5.1E-12 1.8E-16 74.2 6.6 52 22-76 3-54 (91)
45 2dm8_A INAD-like protein; PDZ 99.3 9.7E-13 3.3E-17 80.5 3.4 57 20-76 15-71 (116)
46 2g5m_B Neurabin-2; spinophilin 99.3 1.9E-12 6.6E-17 78.9 4.6 55 22-76 4-63 (113)
47 3nfk_A Tyrosine-protein phosph 99.3 2.6E-12 9E-17 77.5 4.9 57 19-76 14-72 (107)
48 1ujd_A KIAA0559 protein; PDZ d 99.3 3.6E-12 1.2E-16 78.6 5.5 58 19-76 9-77 (117)
49 1qav_A Alpha-1 syntrophin (res 99.3 2.6E-12 9E-17 75.5 4.7 55 21-76 3-58 (90)
50 3l4f_D SH3 and multiple ankyri 99.3 8.2E-12 2.8E-16 78.9 7.2 62 14-76 19-92 (132)
51 3egg_C Spinophilin; PP1, serin 99.3 5.1E-12 1.7E-16 83.3 6.4 56 21-76 79-139 (170)
52 1ihj_A INAD; intermolecular di 99.3 5.2E-12 1.8E-16 75.1 5.6 55 22-76 5-65 (98)
53 1n7e_A AMPA receptor interacti 99.3 1.2E-11 3.9E-16 73.7 6.7 55 21-76 4-58 (97)
54 2jre_A C60-1 PDZ domain peptid 99.3 8.8E-12 3E-16 75.3 6.2 61 16-76 6-72 (108)
55 2dc2_A GOPC, golgi associated 99.3 4.5E-12 1.5E-16 76.6 4.6 55 21-76 8-63 (103)
56 1v62_A KIAA1719 protein; struc 99.3 6.9E-12 2.4E-16 77.4 5.5 56 21-76 14-70 (117)
57 3hpk_A Protein interacting wit 99.3 1.1E-11 3.8E-16 76.9 6.5 54 22-76 19-73 (125)
58 1tp5_A Presynaptic density pro 99.3 7.5E-12 2.6E-16 76.9 5.6 57 18-76 10-66 (119)
59 1m5z_A GRIP, AMPA receptor int 99.3 1.9E-11 6.5E-16 71.7 6.9 55 19-76 3-59 (91)
60 1v6b_A Harmonin isoform A1; st 99.3 1.3E-11 4.3E-16 76.4 6.3 54 22-76 18-71 (118)
61 2djt_A Unnamed protein product 99.3 8E-12 2.7E-16 75.1 5.2 56 21-76 10-66 (104)
62 2cs5_A Tyrosine-protein phosph 99.2 1.2E-11 4.2E-16 76.1 5.7 56 20-76 13-70 (119)
63 4amh_A Disks large homolog 1; 99.2 1E-11 3.6E-16 75.5 4.9 49 28-76 8-60 (106)
64 2w4f_A Protein LAP4; structura 99.2 2.6E-11 8.8E-16 71.8 6.4 54 22-76 3-61 (97)
65 2o2t_A Multiple PDZ domain pro 99.2 5.7E-12 2E-16 77.2 3.7 57 20-76 18-77 (117)
66 1x5q_A LAP4 protein; PDZ domai 99.2 4.1E-11 1.4E-15 72.7 7.4 58 18-76 11-73 (110)
67 2he4_A Na(+)/H(+) exchange reg 99.2 2.4E-11 8.3E-16 71.3 6.1 52 22-76 4-55 (90)
68 1nf3_C PAR-6B; semi-CRIB motif 99.2 6.6E-12 2.2E-16 78.6 3.8 59 18-76 25-93 (128)
69 2dlu_A INAD-like protein; PDZ 99.2 2.4E-11 8.1E-16 73.9 6.1 53 21-76 14-66 (111)
70 2koj_A Partitioning defective 99.2 4.2E-11 1.4E-15 72.6 7.0 60 17-76 6-67 (111)
71 1kwa_A Hcask/LIN-2 protein; PD 99.2 2.6E-11 8.7E-16 71.6 5.8 51 23-76 2-53 (88)
72 1wfg_A Regulating synaptic mem 99.2 2E-11 7E-16 76.9 5.5 54 23-76 28-93 (131)
73 2dmz_A INAD-like protein; PDZ 99.2 2.8E-11 9.5E-16 75.3 5.9 57 20-76 13-74 (129)
74 2yt7_A Amyloid beta A4 precurs 99.2 7.5E-11 2.6E-15 70.9 7.5 58 19-76 6-65 (101)
75 2la8_A Inactivation-NO-after-p 99.2 2.3E-11 7.9E-16 74.3 5.2 51 22-76 2-53 (106)
76 2uzc_A Human pdlim5, PDZ and L 99.2 2.4E-11 8.1E-16 70.9 5.0 52 22-76 3-54 (88)
77 3qe1_A Sorting nexin-27, G pro 99.2 4.5E-11 1.6E-15 72.0 6.4 55 21-76 5-70 (107)
78 1wg6_A Hypothetical protein (r 99.2 9.9E-12 3.4E-16 77.9 3.3 53 24-76 27-83 (127)
79 1z87_A Alpha-1-syntrophin; pro 99.2 1.3E-11 4.6E-16 86.5 4.4 56 20-76 75-131 (263)
80 1um7_A Synapse-associated prot 99.2 1.2E-11 4.1E-16 75.0 3.6 58 17-76 10-67 (113)
81 2ego_A General receptor for ph 99.2 6.1E-11 2.1E-15 70.5 6.5 54 21-76 3-64 (96)
82 3r68_A Na(+)/H(+) exchange reg 99.2 2.7E-11 9.2E-16 71.4 4.8 54 20-76 3-56 (95)
83 1va8_A Maguk P55 subfamily mem 99.2 3.9E-11 1.3E-15 73.5 5.7 70 3-76 2-76 (113)
84 2iwn_A Multiple PDZ domain pro 99.2 5.8E-11 2E-15 69.8 6.3 55 22-76 4-61 (97)
85 1mfg_A ERB-B2 interacting prot 99.2 8E-11 2.7E-15 69.6 6.8 51 23-76 4-61 (95)
86 2h2b_A Tight junction protein 99.2 9.7E-11 3.3E-15 70.6 7.2 54 21-76 6-65 (107)
87 2gzv_A PRKCA-binding protein; 99.2 6.3E-11 2.1E-15 73.1 6.5 55 21-76 23-78 (114)
88 1wi2_A Riken cDNA 2700099C19; 99.2 7.1E-11 2.4E-15 71.2 6.2 54 21-76 14-68 (104)
89 1n7t_A 99-MER peptide of densi 99.2 5.1E-11 1.8E-15 71.5 5.6 55 19-76 8-69 (103)
90 2csj_A TJP2 protein; PDZ domai 99.2 4.8E-11 1.6E-15 73.3 5.5 53 22-76 14-72 (117)
91 1wfv_A Membrane associated gua 99.1 1.2E-11 4.1E-16 73.9 2.2 55 21-76 10-64 (103)
92 2vsp_A PDZ domain-containing p 99.1 2E-11 6.9E-16 71.8 3.1 53 21-76 2-54 (91)
93 1v5q_A GRIP1 homolog, glutamat 99.1 8.9E-11 3E-15 72.8 6.1 58 19-76 12-73 (122)
94 3k1r_A Harmonin; protein-prote 99.1 6.3E-11 2.1E-15 78.4 5.7 58 17-76 79-137 (192)
95 2v90_A PDZ domain-containing p 99.1 8.2E-11 2.8E-15 69.7 5.6 54 22-76 3-57 (96)
96 2ejy_A 55 kDa erythrocyte memb 99.1 9.8E-11 3.4E-15 71.0 5.8 51 23-76 13-64 (97)
97 1q3o_A Shank1; PDZ, GKAP, pept 99.1 1.7E-10 5.7E-15 69.9 6.9 54 22-76 7-72 (109)
98 1r6j_A Syntenin 1; PDZ, membra 99.1 7.6E-11 2.6E-15 69.9 5.0 46 22-76 4-50 (82)
99 2qkv_A Inactivation-NO-after-p 99.1 9.6E-11 3.3E-15 69.8 5.4 51 22-76 8-59 (96)
100 1wf7_A Enigma homologue protei 99.1 4.1E-11 1.4E-15 72.0 3.7 54 20-76 3-56 (103)
101 2d90_A PDZ domain containing p 99.1 1.6E-10 5.5E-15 69.2 6.3 53 21-76 5-57 (102)
102 1uew_A Membrane associated gua 99.1 3E-10 1E-14 69.4 7.5 56 21-76 9-71 (114)
103 2kom_A Partitioning defective 99.1 2.6E-10 8.8E-15 70.8 7.2 58 19-76 27-86 (121)
104 2edp_A Fragment, shroom family 99.1 3.5E-11 1.2E-15 72.2 3.0 57 19-76 6-63 (100)
105 2q3g_A PDZ and LIM domain prot 99.1 1.1E-10 3.7E-15 68.3 5.0 51 23-76 4-54 (89)
106 1uez_A KIAA1526 protein; PDZ d 99.1 1.1E-10 3.7E-15 69.8 5.0 56 19-76 5-62 (101)
107 1p1d_A PDZ45, glutamate recept 99.1 1.7E-10 5.7E-15 76.0 6.3 57 20-76 4-64 (196)
108 2xkx_A Disks large homolog 4; 99.1 1.6E-10 5.4E-15 89.3 6.9 55 22-76 59-117 (721)
109 2eei_A PDZ domain-containing p 99.1 6.7E-11 2.3E-15 71.2 3.8 53 21-76 7-59 (106)
110 2e7k_A Maguk P55 subfamily mem 99.1 6.5E-11 2.2E-15 70.2 3.5 53 20-76 4-57 (91)
111 2jxo_A Ezrin-radixin-moesin-bi 99.1 3.2E-10 1.1E-14 67.3 6.4 51 23-76 10-60 (98)
112 1rgw_A ZAsp protein; PDZ, cyph 99.1 1.3E-10 4.4E-15 67.2 4.3 50 24-76 3-52 (85)
113 2d8i_A T-cell lymphoma invasio 99.1 1E-10 3.4E-15 72.7 4.0 57 19-76 12-71 (114)
114 3kzd_A TIAM-1, T-lymphoma inva 99.1 3.6E-10 1.2E-14 68.7 6.3 57 19-76 3-62 (94)
115 2dls_A PDZ-rhogef, RHO guanine 99.1 6.7E-10 2.3E-14 65.7 7.3 51 20-76 6-56 (93)
116 2lob_A Golgi-associated PDZ an 98.6 1.5E-11 5.1E-16 75.9 0.0 55 21-76 26-81 (112)
117 3sfj_A TAX1-binding protein 3; 99.1 2.8E-10 9.6E-15 68.1 5.5 53 23-76 5-72 (104)
118 2vz5_A TAX1-binding protein 3; 99.1 2.4E-10 8.1E-15 72.8 5.3 57 19-76 20-91 (139)
119 1wif_A RSGI RUH-020, riken cDN 99.0 1.7E-10 5.9E-15 73.1 4.5 52 21-76 26-77 (126)
120 2fcf_A Multiple PDZ domain pro 99.0 3.5E-10 1.2E-14 67.6 5.7 54 23-76 5-67 (103)
121 3bpu_A Membrane-associated gua 99.0 4.3E-10 1.5E-14 65.6 5.9 51 21-76 2-52 (88)
122 2f5y_A Regulator of G-protein 99.0 4.1E-10 1.4E-14 66.2 5.8 49 22-76 3-51 (91)
123 2iwq_A Multiple PDZ domain pro 99.0 3.6E-10 1.2E-14 70.6 5.8 62 14-76 17-87 (123)
124 2eeh_A PDZ domain-containing p 99.0 4.3E-10 1.5E-14 67.2 5.8 56 19-76 7-63 (100)
125 2eeg_A PDZ and LIM domain prot 99.0 2.2E-10 7.5E-15 67.8 4.2 52 22-76 8-59 (94)
126 2pa1_A PDZ and LIM domain prot 99.0 3.7E-10 1.3E-14 65.8 4.8 48 26-76 6-53 (87)
127 2kv8_A RGS12, regulator of G-p 99.0 1.3E-10 4.5E-15 67.2 2.7 49 22-76 2-50 (83)
128 1x5n_A Harmonin; PDZ domain, u 99.0 1.3E-09 4.6E-14 66.2 7.1 53 22-76 15-68 (114)
129 1uit_A Human discs large 5 pro 99.0 7.8E-10 2.7E-14 67.7 5.7 53 20-76 17-69 (117)
130 2qt5_A Glutamate receptor-inte 99.0 1E-09 3.6E-14 72.1 6.4 54 22-76 7-61 (200)
131 2kjd_A Sodium/hydrogen exchang 99.0 1.2E-09 4.2E-14 67.5 6.3 52 22-76 9-60 (128)
132 1qau_A Neuronal nitric oxide s 99.0 1.6E-09 5.6E-14 65.6 6.5 52 23-76 2-54 (112)
133 3e17_A Tight junction protein 99.0 1.2E-09 4.2E-14 64.2 5.3 45 25-76 3-49 (88)
134 3khf_A Microtubule-associated 98.9 5.3E-10 1.8E-14 66.4 3.7 51 25-76 5-61 (99)
135 3gsl_A Disks large homolog 4; 98.9 1.8E-09 6.1E-14 69.8 6.4 55 22-76 100-158 (196)
136 2pkt_A PDZ and LIM domain prot 98.9 1.3E-09 4.4E-14 63.9 5.1 50 24-76 5-54 (91)
137 3ngh_A PDZ domain-containing p 98.9 1.7E-09 5.8E-14 65.0 5.3 51 23-76 2-53 (106)
138 2qbw_A PDZ-fibronectin fusion 98.9 2.8E-09 9.5E-14 69.5 5.5 43 32-76 1-50 (195)
139 3soe_A Membrane-associated gua 98.9 5.8E-09 2E-13 65.2 6.5 50 20-76 10-59 (113)
140 1b8q_A Protein (neuronal nitri 98.9 1.1E-09 3.7E-14 67.9 3.0 56 19-76 5-61 (127)
141 3shw_A Tight junction protein 98.8 4.6E-09 1.6E-13 78.6 5.6 49 23-76 2-50 (468)
142 2z17_A Pleckstrin homology SEC 98.8 5.9E-09 2E-13 62.6 5.1 52 24-76 17-75 (104)
143 3tsv_A Tight junction protein 98.8 8.4E-09 2.9E-13 64.3 5.8 51 21-76 28-78 (124)
144 1uf1_A KIAA1526 protein; PDZ d 98.8 1.7E-08 5.8E-13 62.6 7.2 54 21-76 19-73 (128)
145 1wh1_A KIAA1095 protein; PDZ d 98.8 4.4E-09 1.5E-13 65.2 4.3 58 19-76 16-76 (124)
146 1vb7_A PDZ and LIM domain 2; P 98.8 1.7E-09 5.9E-14 63.9 2.2 45 30-76 13-57 (94)
147 2edz_A PDZ domain-containing p 98.8 1.1E-08 3.9E-13 62.3 5.8 52 22-76 13-65 (114)
148 2yuy_A RHO GTPase activating p 98.8 6.2E-10 2.1E-14 69.2 0.0 54 22-76 8-88 (126)
149 2xkx_A Disks large homolog 4; 98.8 1.3E-08 4.3E-13 78.7 7.1 54 21-76 306-359 (721)
150 3tsz_A Tight junction protein 98.8 8.4E-09 2.9E-13 75.2 5.6 51 21-76 8-58 (391)
151 2vsv_A Rhophilin-2; scaffold p 98.7 1.3E-08 4.3E-13 62.7 4.9 49 22-76 23-71 (109)
152 1y7n_A Amyloid beta A4 precurs 98.7 3.8E-08 1.3E-12 58.3 6.6 37 31-76 22-58 (90)
153 2krg_A Na(+)/H(+) exchange reg 98.7 7.9E-09 2.7E-13 70.3 3.7 52 22-76 9-60 (216)
154 3suz_A Amyloid beta A4 precurs 98.7 4.2E-09 1.5E-13 76.4 2.2 57 20-76 202-260 (388)
155 3r0h_A INAD, inactivation-NO-a 98.7 2E-08 6.9E-13 65.8 5.0 50 23-76 114-164 (206)
156 1whd_A RGS3, regulator of G-pr 98.7 5.7E-09 2E-13 62.4 2.0 49 22-76 15-63 (100)
157 1v5l_A PDZ and LIM domain 3; a 98.7 4.8E-09 1.6E-13 63.0 1.5 53 21-76 4-56 (103)
158 1ujv_A Membrane associated gua 98.7 8.7E-08 3E-12 57.1 6.8 52 18-76 6-57 (96)
159 2edv_A FERM and PDZ domain-con 98.7 8.4E-09 2.9E-13 61.4 2.1 49 21-76 7-57 (96)
160 1w9e_A Syntenin 1; cell adhesi 98.7 4.8E-08 1.6E-12 62.7 5.8 50 22-76 4-54 (166)
161 3cyy_A Tight junction protein 98.6 6.4E-08 2.2E-12 56.3 5.8 47 23-76 3-51 (92)
162 2qt5_A Glutamate receptor-inte 98.6 5.3E-08 1.8E-12 63.8 6.0 54 23-76 107-163 (200)
163 2rcz_A Tight junction protein 98.5 2E-07 7E-12 52.6 5.6 44 26-76 5-49 (81)
164 1vae_A Rhophilin 2, rhophilin, 98.5 2.9E-08 1E-12 61.0 0.6 47 24-76 17-63 (111)
165 2eaq_A LIM domain only protein 98.4 5.8E-07 2E-11 52.1 5.9 48 24-76 5-55 (90)
166 1p1d_A PDZ45, glutamate recept 98.4 6.3E-07 2.2E-11 58.7 5.9 54 23-76 108-163 (196)
167 3qik_A Phosphatidylinositol 3, 98.2 1.8E-06 6E-11 53.1 4.9 49 23-76 18-66 (101)
168 2yub_A LIMK-2, LIM domain kina 98.0 1.6E-05 5.6E-10 49.0 5.8 57 19-76 12-73 (118)
169 1w9e_A Syntenin 1; cell adhesi 97.7 5.5E-05 1.9E-09 48.2 5.3 46 22-76 88-134 (166)
170 3suz_A Amyloid beta A4 precurs 97.6 9.3E-06 3.2E-10 58.8 0.3 36 32-76 307-342 (388)
171 3rle_A Golgi reassembly-stacki 97.5 4.6E-05 1.6E-09 50.6 2.5 41 34-76 3-44 (209)
172 2kjp_A Uncharacterized protein 97.5 1.6E-05 5.6E-10 46.9 0.1 26 49-76 2-27 (91)
173 2kl1_A YLBL protein; structure 97.5 4.8E-05 1.6E-09 44.8 2.1 28 47-76 4-31 (94)
174 3k50_A Putative S41 protease; 97.3 0.00022 7.4E-09 52.3 4.7 44 32-76 73-117 (403)
175 2pzd_A Serine protease HTRA2; 97.3 0.00014 4.9E-09 43.5 2.9 29 47-76 34-62 (113)
176 3i18_A LMO2051 protein; alpha- 97.3 0.00027 9.2E-09 41.8 3.9 28 47-76 6-33 (100)
177 2p3w_A Probable serine proteas 97.2 0.00024 8.3E-09 42.5 3.1 29 47-76 34-62 (112)
178 3rle_A Golgi reassembly-stacki 97.2 0.0007 2.4E-08 44.8 5.2 43 33-76 95-140 (209)
179 1fc6_A Photosystem II D1 prote 97.1 0.00057 2E-08 49.1 4.6 43 32-76 84-126 (388)
180 2l97_A HTRA, putative serine p 97.0 0.00067 2.3E-08 42.2 3.7 28 47-76 56-83 (134)
181 1y8t_A Hypothetical protein RV 96.9 0.0012 4.2E-08 46.0 5.1 40 34-76 230-269 (324)
182 3id1_A Regulator of sigma E pr 96.9 0.00045 1.5E-08 40.7 2.2 25 51-76 5-29 (95)
183 2hga_A Conserved protein MTH13 96.9 0.001 3.5E-08 41.3 3.9 28 47-76 24-51 (125)
184 2zpm_A Regulator of sigma E pr 96.8 0.00024 8.4E-09 40.8 0.6 27 49-76 5-31 (91)
185 4a8c_A Periplasmic PH-dependen 96.7 0.0042 1.4E-07 45.3 6.5 28 48-76 363-390 (436)
186 4fgm_A Aminopeptidase N family 96.7 0.0014 4.7E-08 50.1 3.7 39 33-76 485-523 (597)
187 1te0_A Protease DEGS; two doma 96.5 0.0018 6.1E-08 45.2 3.3 29 47-76 243-271 (318)
188 4a8c_A Periplasmic PH-dependen 96.5 0.0019 6.4E-08 47.2 3.4 28 48-76 263-290 (436)
189 2i6v_A General secretion pathw 96.5 0.00097 3.3E-08 38.4 1.4 28 48-76 19-46 (87)
190 3stj_A Protease DEGQ; serine p 96.4 0.0017 5.9E-08 46.2 2.6 28 48-76 263-290 (345)
191 1lcy_A HTRA2 serine protease; 96.4 0.0022 7.6E-08 45.0 3.0 28 48-76 256-283 (325)
192 3pv2_A DEGQ; trypsin fold, PDZ 96.2 0.0024 8.2E-08 47.0 2.8 28 48-76 282-309 (451)
193 3pv2_A DEGQ; trypsin fold, PDZ 96.2 0.0025 8.6E-08 46.9 2.7 28 48-76 386-413 (451)
194 3qo6_A Protease DO-like 1, chl 95.8 0.0075 2.6E-07 42.6 3.4 28 48-76 251-289 (348)
195 2i4s_A General secretion pathw 95.7 0.0049 1.7E-07 36.5 1.9 27 49-76 38-64 (105)
196 3num_A Serine protease HTRA1; 95.6 0.0021 7.1E-08 45.1 0.0 28 48-76 254-281 (332)
197 1ky9_A Protease DO, DEGP, HTRA 95.3 0.0057 2E-07 44.9 1.4 28 48-76 286-313 (448)
198 1k32_A Tricorn protease; prote 94.5 0.041 1.4E-06 42.9 4.4 40 32-76 736-784 (1045)
199 4fln_A Protease DO-like 2, chl 94.4 0.031 1.1E-06 42.4 3.6 28 47-76 276-303 (539)
200 1ky9_A Protease DO, DEGP, HTRA 94.1 0.0091 3.1E-07 43.9 0.0 29 47-76 382-410 (448)
201 4fln_A Protease DO-like 2, chl 70.0 3.1 0.00011 31.5 2.9 28 48-76 415-442 (539)
202 3jxo_A TRKA-N domain protein; 55.6 15 0.00051 19.9 3.4 27 49-75 40-69 (86)
203 1vc3_B L-aspartate-alpha-decar 52.7 28 0.00095 20.8 4.4 54 12-74 8-62 (96)
204 1pqh_A Aspartate 1-decarboxyla 52.7 42 0.0014 21.4 6.0 54 12-74 49-103 (143)
205 3oug_A Aspartate 1-decarboxyla 47.8 46 0.0016 20.4 4.9 54 12-74 35-89 (114)
206 3d2w_A TAR DNA-binding protein 47.2 19 0.00064 19.8 2.9 31 7-38 23-53 (89)
207 1uhe_A Aspartate 1-decarboxyla 46.7 36 0.0012 20.3 4.2 53 12-74 7-60 (97)
208 3plx_B Aspartate 1-decarboxyla 46.0 6.1 0.00021 24.0 0.7 53 12-74 8-61 (102)
209 2c45_A Aspartate 1-decarboxyla 35.4 58 0.002 20.6 4.1 54 12-74 32-86 (139)
210 2d9o_A DNAJ (HSP40) homolog, s 28.5 63 0.0021 18.4 3.2 32 6-38 28-59 (100)
211 1wf0_A TDP-43, TAR DNA-binding 28.1 40 0.0014 17.9 2.2 31 7-38 17-47 (88)
212 2yxz_A Thiamin-monophosphate k 27.5 35 0.0012 23.1 2.2 40 34-74 114-155 (311)
213 1vct_A Hypothetical protein PH 27.4 37 0.0013 21.8 2.2 27 49-75 149-179 (205)
214 3mcq_A Thiamine-monophosphate 26.2 34 0.0012 23.4 2.0 42 34-75 110-154 (319)
215 1fm0_E Molybdopterin convertin 22.9 19 0.00065 22.8 0.2 17 60-76 81-97 (150)
216 2q5w_E Molybdopterin-convertin 22.9 19 0.00065 22.8 0.2 17 60-76 79-95 (149)
217 2yyd_A Selenide, water dikinas 22.6 42 0.0015 23.4 1.9 42 34-75 132-177 (345)
218 2wp4_A Molybdopterin-convertin 22.2 20 0.00069 22.6 0.2 16 61-76 88-103 (147)
219 2adz_A Alpha-1-syntrophin; pro 21.2 16 0.00056 23.9 -0.4 19 56-74 57-75 (178)
No 1
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.66 E-value=3.1e-16 Score=97.79 Aligned_cols=70 Identities=47% Similarity=0.942 Sum_probs=66.3
Q ss_pred CchhhhhhhcCCCCCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 7 FSSDKVKKKYGSLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 7 ~~~~~~~~~~~~~~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
|+...+.++|..+++++++|+|.|+..+|||++.++.+....+++|..|.|++||++.|+|++||+|++|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~v~l~k~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~I 79 (124)
T 2daz_A 10 FTDQKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEI 79 (124)
T ss_dssp GSHHHHHHHSTTSSSEEEEEEEECCSSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEE
T ss_pred cchhhHHHhhccCCCceEEEEEEeCCCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 8899999999999999999999999889999999998866689999999999999999999999999986
No 2
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.48 E-value=8.6e-14 Score=84.20 Aligned_cols=57 Identities=28% Similarity=0.534 Sum_probs=50.0
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCCC----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~~----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
++++++|+|.|+..+|||+|.|+.+.+ +.+++|..|.+++||++.|+|++||+|++|
T Consensus 1 ~e~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~v 61 (105)
T 2awx_A 1 MEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAV 61 (105)
T ss_dssp --CEEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred CCeEEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEE
Confidence 357889999999899999999998742 358999999999999999999999999986
No 3
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.48 E-value=7.6e-14 Score=85.55 Aligned_cols=55 Identities=18% Similarity=0.281 Sum_probs=49.0
Q ss_pred CCCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..++.++|+|.|...+|||+|.++. ...+||++|.|+|+|+++|+|++||+|++|
T Consensus 2 ~~g~~k~V~l~K~~~~LG~tI~~~g---~g~~~I~rI~~gg~a~r~g~L~vGD~I~~V 56 (95)
T 3gge_A 2 MKGIEKEVNVYKSEDSLGLTITDNG---VGYAFIKRIKDGGVIDSVKTICVGDHIESI 56 (95)
T ss_dssp CCEEEEEEEEECCSSCCCEEEECSS---SSCCEEEEECTTSHHHHCTTCCTTCEEEEE
T ss_pred CCCeEEEEEEEECCCCceEEEEcCC---CCcEEEEEEcCCChHHhcCCCCCCCEEEEE
Confidence 3567899999999999999999652 356899999999999999999999999986
No 4
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.46 E-value=1.1e-13 Score=84.32 Aligned_cols=61 Identities=28% Similarity=0.544 Sum_probs=53.1
Q ss_pred cCCCCCcEEEEEEecCCCcccEEEecCCCC---CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 16 YGSLGPDLVVVTLERSHTGLGISLAGHKDR---TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 16 ~~~~~~e~~~v~L~k~~~gLG~si~Gg~~~---~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..+..++++|+|.|...+|||+|.++.+. ...++||..|.+++||+++|+|++||+|++|
T Consensus 9 ~~~~~~~~~~v~l~k~~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~V 72 (108)
T 2d92_A 9 LALWSPEVKIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSV 72 (108)
T ss_dssp CCSSCSSCEEEEEEECSSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEE
T ss_pred ccccCCceEEEEEEECCCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEE
Confidence 344556789999999989999999998762 2578999999999999999999999999986
No 5
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.44 E-value=2e-13 Score=83.79 Aligned_cols=57 Identities=32% Similarity=0.594 Sum_probs=50.4
Q ss_pred CCCcEEEEEEecCCCcccEEEecCCCCC-CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERSHTGLGISLAGHKDRT-KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~~~gLG~si~Gg~~~~-~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.+++.|+|.|+ .||||+|.|+.+.. ..++||..|.+++||+++|+|++||+|++|
T Consensus 12 ~~~~~~~v~l~k~-~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~V 69 (109)
T 1wi4_A 12 RDPAFRVITVTKE-TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSI 69 (109)
T ss_dssp CCTTEEEEEECCS-SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEE
T ss_pred CCCcEEEEEEeCC-CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEE
Confidence 3467899999996 89999999998743 357999999999999999999999999986
No 6
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.44 E-value=3.2e-13 Score=84.96 Aligned_cols=57 Identities=28% Similarity=0.467 Sum_probs=50.8
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCC--CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDR--TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~--~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.+.+.|+|.|+..||||+|.|+.+. ...++||.+|.+++||+++|.|++||+|++|
T Consensus 27 ~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~V 85 (130)
T 1i16_A 27 EATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQL 85 (130)
T ss_dssp SEEEEEEEEETTSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEEC
T ss_pred CCcEEEEEEEcCCCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 35778899999989999999999883 2468999999999999999899999999987
No 7
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.43 E-value=3.7e-13 Score=79.46 Aligned_cols=55 Identities=29% Similarity=0.569 Sum_probs=49.6
Q ss_pred cEEEEEEecCCCcccEEEecCCCCC----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
++++|+|.|+..+|||++.||.+.+ ..+++|..|.|++||++.|+|++||+|++|
T Consensus 3 ~~~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~v 61 (94)
T 2fe5_A 3 TIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAV 61 (94)
T ss_dssp CEEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred EEEEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 6789999999899999999998742 358999999999999999999999999986
No 8
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.43 E-value=3.2e-13 Score=81.00 Aligned_cols=55 Identities=33% Similarity=0.580 Sum_probs=49.8
Q ss_pred cEEEEEEecCCCcccEEEecCCCCC----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++|+|.|+..+|||++.|+.+.+ ..+++|..|.+++||++.|+|++||+|++|
T Consensus 4 ~~~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~v 62 (102)
T 2i1n_A 4 KYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRV 62 (102)
T ss_dssp EEEEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred eEEEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEE
Confidence 5688999999899999999998742 469999999999999999999999999986
No 9
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.42 E-value=6.3e-13 Score=79.11 Aligned_cols=56 Identities=29% Similarity=0.523 Sum_probs=51.1
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
++.++|+|.|+..+|||++.++.+....+++|..|.|++||++.|+|++||+|++|
T Consensus 3 g~~~~v~l~~~~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~v 58 (98)
T 2opg_A 3 GCETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEV 58 (98)
T ss_dssp CEEEEEEEECBTTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred CCEEEEEEEECCCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEE
Confidence 56788999999999999999998765568999999999999999999999999986
No 10
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.41 E-value=3.8e-13 Score=80.58 Aligned_cols=57 Identities=25% Similarity=0.494 Sum_probs=51.2
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCCC----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~~----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.+.+.|+|.|+..+|||++.++.+.+ ..+++|..|.+++||++.|+|++||+|++|
T Consensus 5 ~~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~v 65 (101)
T 2jik_A 5 LVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSV 65 (101)
T ss_dssp GEEEEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred CCccEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEE
Confidence 346789999999999999999998853 469999999999999999999999999986
No 11
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.41 E-value=7.3e-13 Score=78.56 Aligned_cols=57 Identities=28% Similarity=0.536 Sum_probs=51.4
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCCC--CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDRT--KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~~--~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+++.++|+|.|+..+|||++.|+.+.. ..+++|..|.+++||++.|+|++||+|++|
T Consensus 3 ~g~~~~v~l~k~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~v 61 (96)
T 1d5g_A 3 PGDIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAV 61 (96)
T ss_dssp TTCEEEEEEECSSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEE
T ss_pred CCCEEEEEEEeCCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEE
Confidence 467899999999999999999988732 468999999999999999999999999986
No 12
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.41 E-value=6.2e-13 Score=78.06 Aligned_cols=54 Identities=26% Similarity=0.466 Sum_probs=48.5
Q ss_pred cEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++|+|.|+..+|||++.|+.+. ..+++|..|.|++||++.|+|++||+|++|
T Consensus 2 ~~~~v~l~~~~~g~G~~~~~g~~~-~~~~~V~~V~~~spA~~aG~L~~GD~I~~i 55 (90)
T 2q9v_A 2 MEQDIFLWRKETGFGFRILGGNEP-GEPIYIGHIVPLGAADTDGRLRSGDELISV 55 (90)
T ss_dssp EEEEEEEECBTTBCCEEEEECSST-TSCEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred CcEEEEEEECCCccCEEEEccccC-CCCEEEEEECCCChHHHCCCCCCCCEEEEE
Confidence 357899999999999999999874 456999999999999999999999999986
No 13
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.41 E-value=1.5e-13 Score=85.32 Aligned_cols=59 Identities=29% Similarity=0.522 Sum_probs=50.9
Q ss_pred CCCCcEEEEEEecCCCcccEEEecCCCCC--CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 18 SLGPDLVVVTLERSHTGLGISLAGHKDRT--KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 18 ~~~~e~~~v~L~k~~~gLG~si~Gg~~~~--~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...++.++|+|.|+..||||+|.|+.+.+ ..+++|..|.|++||++.|+|++||+|++|
T Consensus 21 ~~~~~~~~v~L~k~~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~V 81 (117)
T 2fne_A 21 QSMPQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAV 81 (117)
T ss_dssp --CCEEEEEEECCBTTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred cCCCccEEEEEEeCCCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 33467889999999899999999997642 358999999999999999999999999986
No 14
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.41 E-value=3.5e-13 Score=83.55 Aligned_cols=57 Identities=32% Similarity=0.525 Sum_probs=50.8
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCCC----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~~----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.+.+.|+|.|+..||||+|.|+.+.+ +.+++|..|.+++||++.|+|++||+|++|
T Consensus 22 ~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~V 82 (117)
T 2byg_A 22 SMTVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMV 82 (117)
T ss_dssp EEEEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred CCceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 357789999999899999999998742 458999999999999999999999999986
No 15
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=8.9e-13 Score=80.12 Aligned_cols=58 Identities=28% Similarity=0.477 Sum_probs=51.9
Q ss_pred CCCcEEEEEEecCCCcccEEEecCCCCC--CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERSHTGLGISLAGHKDRT--KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~~~gLG~si~Gg~~~~--~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++.++|+|.|+..+|||++.++.+.+ ..+++|..|.|++||++.|+|++||+|++|
T Consensus 5 ~~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~v 64 (110)
T 1um1_A 5 SSGYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEV 64 (110)
T ss_dssp SCCCEEEEEEECCTTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEE
T ss_pred CCCcEEEEEEEECCCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 3568899999999889999999988743 468999999999999999999999999986
No 16
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=2.9e-13 Score=82.42 Aligned_cols=54 Identities=26% Similarity=0.433 Sum_probs=48.2
Q ss_pred EEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.|+|.|...+|||+|.|+.+...+.+||..|.+++||+++|+|++||+|++|
T Consensus 7 ~~~v~l~k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~V 60 (103)
T 1ufx_A 7 GTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEV 60 (103)
T ss_dssp SEEEEEECCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEE
T ss_pred eEEEEEEcCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEE
Confidence 567889898899999999999864455699999999999999999999999986
No 17
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=6.6e-13 Score=82.59 Aligned_cols=59 Identities=25% Similarity=0.461 Sum_probs=52.6
Q ss_pred CCCCCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 17 GSLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 17 ~~~~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+..+.++|+|.|+..+|||++.|+.+. ..+++|..|.+++||++.|+|++||+|++|
T Consensus 14 ~~~~~~~~~v~l~~~~~glG~~~~~g~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~V 72 (123)
T 1ueq_A 14 SQLKGTFLSTTLKKSNMGFGFTIIGGDEP-DEFLQVKSVIPDGPAAQDGKMETGDVIVYI 72 (123)
T ss_dssp TTCCSEEEEEEEECCTTSCSEEEECCSSS-SCCCEEEEECTTSHHHHTSCCCTTCEEEEE
T ss_pred ccCCCcEEEEEEEeCCCceeEEEecccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEE
Confidence 34567888999999988999999998773 578999999999999999999999999986
No 18
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=6.3e-13 Score=80.34 Aligned_cols=57 Identities=37% Similarity=0.617 Sum_probs=50.8
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCC-----CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDR-----TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~-----~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.++|+|.|+..+|||+|.++.+. .+.+++|..|.|++||++.|+|++||+|++|
T Consensus 5 ~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~v 66 (105)
T 1wha_A 5 SSGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSI 66 (105)
T ss_dssp CCEEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEE
T ss_pred CCeeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEE
Confidence 35678899999988999999999873 2579999999999999999999999999986
No 19
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=6.3e-13 Score=82.13 Aligned_cols=57 Identities=25% Similarity=0.494 Sum_probs=51.1
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCCC----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~~----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.+.|+|.|+..+|||+|.++.+.+ ..+++|..|.+++||++.|+|++||+|++|
T Consensus 15 ~~~~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~v 75 (120)
T 2eno_A 15 LVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSV 75 (120)
T ss_dssp EEEEEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEE
T ss_pred CCceEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEE
Confidence 356788999999999999999998742 569999999999999999999999999986
No 20
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.39 E-value=7.6e-13 Score=79.35 Aligned_cols=57 Identities=23% Similarity=0.486 Sum_probs=51.1
Q ss_pred CCCCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 18 SLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 18 ~~~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+++.+.+.|+|.|+..+|||++.++.+ ..+++|..|.|++||++.|+|++||+|++|
T Consensus 7 ~~~~~~~~v~l~k~~~glG~~~~~~~~--~~gv~V~~V~~~spA~~aG~l~~GD~I~~v 63 (104)
T 3i4w_A 7 DIPREPRRIVIHRGSTGLGFNIVGGEX--GEGIFISFILAGGPADLSGELRKGDQILSV 63 (104)
T ss_dssp CCCSSCEEEEEECBTTBTSEEEEECC---CCCEEEEEECTTSHHHHHCCCCTTEEEEEE
T ss_pred CCCCccEEEEEEeCCCccCEEEECCCC--CCCEEEEEECCCChHHhcCCCCCCCEEEEE
Confidence 466788999999998899999999876 368999999999999999999999999986
No 21
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.38 E-value=6.4e-13 Score=81.88 Aligned_cols=58 Identities=34% Similarity=0.501 Sum_probs=51.7
Q ss_pred CCCcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..++++.+.|.|. ..+|||+|.|+.+....+++|..|.|++||++.|+|++||+|++|
T Consensus 12 ~~~~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~i 70 (119)
T 1x6d_A 12 QLDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSI 70 (119)
T ss_dssp SCTTEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEE
T ss_pred CCCCeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 3467888999886 789999999998865679999999999999999999999999986
No 22
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.38 E-value=4.6e-13 Score=84.00 Aligned_cols=63 Identities=19% Similarity=0.374 Sum_probs=54.6
Q ss_pred hhhcCCCCCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 13 KKKYGSLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 13 ~~~~~~~~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.-..+.++..+|+|.|+..+|||++.|+.+ ...+++|..|.++++|++.|+|++||+|++|
T Consensus 9 ~~~~~~~~g~~~~v~l~~~~~g~G~~i~g~~~-~~~~v~V~~V~~~spA~~aG~L~~GD~Il~v 71 (129)
T 2kpk_A 9 TRNPSELKGKFIHTKLRKSSRGFGFTVVGGDE-PDEFLQIKSLVLDGPAALDGKMETGDVIVSV 71 (129)
T ss_dssp CSCTTTSCSEEEEEEEEECSSCCSEEEEEEEE-TTEEEEEEEECTTSHHHHHSSCCTTCEEEEE
T ss_pred CCCchhcCCcEEEEEEEECCCcccEEEeCccC-CCCCEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 34445566788999999998899999999876 3578999999999999999999999999986
No 23
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.38 E-value=4.3e-13 Score=81.91 Aligned_cols=55 Identities=25% Similarity=0.502 Sum_probs=49.2
Q ss_pred cEEEEEEecC-CCcccEEEecCCCC-CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERS-HTGLGISLAGHKDR-TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~-~~gLG~si~Gg~~~-~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++|+|.|. ..+|||+|.|+.+. ...++||.+|.|++||+++|+|++||+|++|
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~V 61 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQV 61 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEE
Confidence 6788999986 68999999998763 3679999999999999999999999999986
No 24
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.37 E-value=5.2e-13 Score=83.32 Aligned_cols=57 Identities=26% Similarity=0.531 Sum_probs=50.6
Q ss_pred CCcEEEEEEecC-CCcccEEEecCCCCC--CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERS-HTGLGISLAGHKDRT--KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~-~~gLG~si~Gg~~~~--~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..++++|+|.|+ ..+|||+|.|+.+.. ..++||..|.+++||++.|+|++||+|++|
T Consensus 23 ~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~i 82 (128)
T 2db5_A 23 GRQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAI 82 (128)
T ss_dssp TCEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEE
T ss_pred cCceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 567899999999 479999999988742 358999999999999999999999999986
No 25
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.37 E-value=9.1e-13 Score=82.17 Aligned_cols=57 Identities=26% Similarity=0.538 Sum_probs=50.1
Q ss_pred CCcEEEEEEecC-CCcccEEEecCCCC--CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERS-HTGLGISLAGHKDR--TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~-~~gLG~si~Gg~~~--~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.+.+.|+|.|+ ..+|||+|.||.+. ...++||..|.+++||+++|+|++||+|++|
T Consensus 22 ~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~V 81 (118)
T 3b76_A 22 SMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNV 81 (118)
T ss_dssp EEEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEE
T ss_pred CCCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEE
Confidence 346788999998 68999999999863 3568999999999999999999999999986
No 26
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.37 E-value=1.1e-12 Score=77.82 Aligned_cols=55 Identities=27% Similarity=0.515 Sum_probs=49.0
Q ss_pred cEEEEEEecCCCcccEEEecCCCCC---CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRT---KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~---~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..+|+|.|+..+|||++.++.+.. ..+++|..|.|++||++.|+|++||+|++|
T Consensus 3 ~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~i 60 (97)
T 2jil_A 3 RTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSV 60 (97)
T ss_dssp EEEEEEEECBTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred eEEEEEEEeCCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEE
Confidence 4577999998889999999998643 569999999999999999999999999986
No 27
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.37 E-value=3.5e-13 Score=83.99 Aligned_cols=59 Identities=29% Similarity=0.521 Sum_probs=46.1
Q ss_pred CCCCcEEEEEEecCC-CcccEEEecCCCCC--CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 18 SLGPDLVVVTLERSH-TGLGISLAGHKDRT--KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 18 ~~~~e~~~v~L~k~~-~gLG~si~Gg~~~~--~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.+.++|+|.|+. .+|||+|.||.+.+ ..++||..|.|++||++.|.|++||+|++|
T Consensus 20 s~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~V 81 (120)
T 2iwo_A 20 FQSMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTI 81 (120)
T ss_dssp -----CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEE
T ss_pred CCCCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEE
Confidence 345678899999995 59999999988632 358999999999999999889999999986
No 28
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.35 E-value=1.7e-12 Score=76.76 Aligned_cols=54 Identities=26% Similarity=0.483 Sum_probs=47.8
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++.|+|.|+..+|||++.++. ...+++|.+|.+++||++.|+|++||+|++|
T Consensus 3 ~~~r~v~l~k~~~~lG~~i~~~~--~~~~~~V~~v~~gspA~~aG~L~~GD~I~~i 56 (93)
T 3o46_A 3 DSVKIIRLVKNREPLGATIKKDE--QTGAIIVARIMRGGAADRSGLIHVGDELREV 56 (93)
T ss_dssp -CCEEEEEEESSSCCCEEEEECT--TTCCEEEEEECTTSHHHHHTCCCTTCEEEEE
T ss_pred ccEEEEEEEeCCCCccEEEEecC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 46788999999889999999872 2578999999999999999999999999986
No 29
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=1.3e-12 Score=79.18 Aligned_cols=56 Identities=36% Similarity=0.668 Sum_probs=49.0
Q ss_pred CcEEEEEEecCCCcccEEEec---CCCC--CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAG---HKDR--TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~G---g~~~--~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.+.|+|.|...+|||+|.+ +.+. ...++||..|.|++||++.|+|++||+|++|
T Consensus 8 ~~~~~v~l~k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~v 68 (107)
T 1wf8_A 8 LELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEV 68 (107)
T ss_dssp EEEEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEE
T ss_pred ceEEEEEEEECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEE
Confidence 357789999998899999999 5553 2469999999999999999999999999986
No 30
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.35 E-value=2e-12 Score=83.76 Aligned_cols=55 Identities=35% Similarity=0.655 Sum_probs=50.3
Q ss_pred cEEEEEEecCCCcccEEEecCCCCC----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++|+|.|+..+|||+|.||.+.+ ..++||..|.|++||++.|+|++||+|++|
T Consensus 5 ~~~~v~l~~~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~v 63 (196)
T 3gsl_A 5 EYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFV 63 (196)
T ss_dssp EEEEEEEECBTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred EEEEEEEEECCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEE
Confidence 5788999999999999999999853 468999999999999999999999999986
No 31
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=1.5e-12 Score=78.84 Aligned_cols=57 Identities=28% Similarity=0.536 Sum_probs=51.4
Q ss_pred CCcEEEEEEecCCCcccEEEe-----cCCCCC--CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLA-----GHKDRT--KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~-----Gg~~~~--~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.+.++|+|.|+..+|||+|. ||.+.. ..+++|..|.+++||++.|+|++||+|++|
T Consensus 7 ~~~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~v 70 (108)
T 1q7x_A 7 PGDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAV 70 (108)
T ss_dssp SSSEEEEEEESSSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEE
T ss_pred CCcEEEEEEEECCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEE
Confidence 467899999999899999999 888742 478999999999999999999999999986
No 32
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.35 E-value=2.8e-12 Score=78.78 Aligned_cols=56 Identities=27% Similarity=0.422 Sum_probs=49.6
Q ss_pred CcEEEEEEecC-CCcccEEEecCCCCC--------CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERS-HTGLGISLAGHKDRT--------KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~-~~gLG~si~Gg~~~~--------~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|+|.|. ..+|||+|.|+.+.. ..+++|..|.+++||++.|+|++||+|++|
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~v 78 (117)
T 2ehr_A 14 GPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEV 78 (117)
T ss_dssp CCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEE
T ss_pred CCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEE
Confidence 35688999998 689999999998742 369999999999999999999999999986
No 33
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=3e-12 Score=77.55 Aligned_cols=56 Identities=25% Similarity=0.508 Sum_probs=49.7
Q ss_pred CcEEEEEEecCCCcccEEEecCCCC-------CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDR-------TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~-------~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|+|.|+..+|||+|.|+.+. ...++||..|.+++||++.|.|++||+|++|
T Consensus 7 ~~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~v 69 (107)
T 1uhp_A 7 GKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEV 69 (107)
T ss_dssp SEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEE
T ss_pred cEEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEE
Confidence 4678899999989999999998863 2468999999999999999789999999986
No 34
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.34 E-value=1.4e-12 Score=78.78 Aligned_cols=56 Identities=30% Similarity=0.664 Sum_probs=48.5
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCC--CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDR--TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~--~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.+..+|+| |+..+|||+|.|+.+. ...+++|..|.+++||++.|+|++||+|++|
T Consensus 9 ~~~~~~v~l-~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~i 66 (106)
T 3axa_A 9 EPEIITVTL-KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSV 66 (106)
T ss_dssp -CCEEEEEE-ECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEE
T ss_pred CceEEEEEE-CCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 457788999 7889999999997652 3568999999999999999999999999986
No 35
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.34 E-value=1.9e-12 Score=79.29 Aligned_cols=56 Identities=39% Similarity=0.703 Sum_probs=50.1
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.+.++|+|.|+..||||++.++.+. ..+++|..|.+++||++.|+|++||+|++|
T Consensus 22 ~~~~~~v~l~~~~~glG~~l~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~V 77 (112)
T 2r4h_A 22 SMDFYTVELERGAKGFGFSLRGGREY-NMDLYVLRLAEDGPAERSGKMRIGDEILEI 77 (112)
T ss_dssp -CCEEEEEEECBTTBTSEEEEECGGG-TCCEEEEEECTTSHHHHTTCCCTTCEEEEE
T ss_pred CCceEEEEEEcCCCccCEEEeccccC-CCCEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 36789999999988999999998763 578999999999999999999999999986
No 36
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.34 E-value=2.5e-12 Score=74.68 Aligned_cols=52 Identities=21% Similarity=0.415 Sum_probs=46.9
Q ss_pred EEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 24 VVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 24 ~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+|+|.|+..||||++.++.+. ..+++|..|.|++||++.|+|++||+|++|
T Consensus 2 ~~v~l~k~~~g~G~~i~~~~~~-~~~~~V~~v~~~spA~~aG~l~~GD~I~~v 53 (85)
T 2i04_A 2 IHTKLRKSSRGFGFTVVGGDEP-DEFLQIKSLVLDGPAALDGKMETGDVIVSV 53 (85)
T ss_dssp EEEEEECBTTBSSEEEEECCST-TBCEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred EEEEEEECCCCCCEEEEcccCC-CCCEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 4688999989999999998763 578999999999999999999999999986
No 37
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.34 E-value=2.6e-12 Score=75.60 Aligned_cols=54 Identities=30% Similarity=0.645 Sum_probs=48.0
Q ss_pred CcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|+|.|. ..+|||++.++.+ ..+++|..|.|++||++.|+|++||+|++|
T Consensus 3 ~~~~~v~l~k~~~~~lG~~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~v 57 (92)
T 2qg1_A 3 SDTLTIGLQKKPGKGLGLSIVGKRN--DTGVFVSDIVKGGIADADGRLMQGDQILMV 57 (92)
T ss_dssp -CEEEEEEECCTTSCCSEEEECCSS--SCSCEEEEECTTSHHHHHTCCCTTCEEEEE
T ss_pred ceEEEEEEEeCCCCcccEEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 35788999997 6899999998875 468999999999999999999999999985
No 38
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.34 E-value=1.5e-12 Score=76.64 Aligned_cols=55 Identities=29% Similarity=0.601 Sum_probs=49.2
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...++|+|.|+..+|||++.++.+. ..+++|..|.+++||++.|.|++||+|++|
T Consensus 4 ~~~r~v~l~k~~~glG~~l~~~~~~-~~~~~V~~V~~~spA~~aGgl~~GD~I~~v 58 (93)
T 2dkr_A 4 GSSGVVELPKTDEGLGFNIMGGKEQ-NSPIYISRVIPGGVADRHGGLKRGDQLLSV 58 (93)
T ss_dssp SCSCEEEEECCTTCCCEEEECSSSS-SCCCEEEEECTTSHHHHHCCCCTTCBEEEE
T ss_pred CCCEEEEEEeCCCCccEEEecccCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 4567899999999999999998764 578999999999999999889999999986
No 39
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=1.5e-12 Score=78.50 Aligned_cols=54 Identities=26% Similarity=0.478 Sum_probs=48.6
Q ss_pred cEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++++|.|...+|||++.++.+. ..+++|..|.+++||++.|+|++||+|++|
T Consensus 9 ~~~~v~l~~~~~g~G~~i~~g~~~-~~~~~V~~V~~~spA~~aG~L~~GD~Il~i 62 (103)
T 1uep_A 9 KELDVHLRRMESGFGFRILGGDEP-GQPILIGAVIAMGSADRDGRLHPGDELVYV 62 (103)
T ss_dssp EEECCEEESSSSSCCEEECCCCST-TSCCBEEEECTTSTTGGGTCCCTTCEEEEE
T ss_pred eEEEEEEEeCCCccCEEEeeecCC-CCCeEEEEeCCCChHHhCCCCCCCCEEEEE
Confidence 457788999989999999998864 578999999999999999999999999986
No 40
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.33 E-value=2.9e-12 Score=75.91 Aligned_cols=53 Identities=30% Similarity=0.501 Sum_probs=47.4
Q ss_pred cEEEEEEecC--CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERS--HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~--~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++|+|.|. ..+|||++.++.+ ..+++|..|.|++||++.|+|++||+|++|
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~v 57 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTD--EPGVFILDLLEGGLAAQDGRLSSNDRVLAI 57 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSS--SCSEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred EEEEEEEEECCCCCcccEEEEeccC--CCCEEEEEeCCCChHHHCCCCCCCCEEEEE
Confidence 5788999986 4689999998876 468999999999999999999999999986
No 41
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.33 E-value=3e-12 Score=84.26 Aligned_cols=57 Identities=14% Similarity=0.321 Sum_probs=51.4
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCCCC-CcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDRTK-MAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~~~-~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+++...|+|.|+..+|||+|.||.+... .++||..|.|++||+++|+|++||+|++|
T Consensus 16 ~~~~~~v~~~~~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~v 73 (206)
T 3r0h_A 16 PNKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDI 73 (206)
T ss_dssp TTSCEEEEEECTTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred CCCEEEEEEEeCCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEE
Confidence 4677889999999999999999998533 58999999999999999999999999986
No 42
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=9.4e-13 Score=80.26 Aligned_cols=59 Identities=34% Similarity=0.621 Sum_probs=51.0
Q ss_pred CCCCcEEEEEEecC-CCcccEEEecCCCC--------CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 18 SLGPDLVVVTLERS-HTGLGISLAGHKDR--------TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 18 ~~~~e~~~v~L~k~-~~gLG~si~Gg~~~--------~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+++...++|+|.|+ ..+|||+|.|+.+. ...+++|..|.++++|++.|+|++||+|++|
T Consensus 5 p~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~v 72 (111)
T 1uju_A 5 SSGPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEV 72 (111)
T ss_dssp CCSCSSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBB
T ss_pred CCCCccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 45566788999998 58999999999852 2468999999999999999999999999986
No 43
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.32 E-value=1.5e-12 Score=75.97 Aligned_cols=55 Identities=31% Similarity=0.629 Sum_probs=48.3
Q ss_pred CcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
++.++|+|.|. ..+|||++.|+.+. ..+++|.+|.|++||++++.|++||+|++|
T Consensus 1 g~~~~v~l~~~~~~~lG~~i~~~~~~-~~~~~V~~V~~gspA~~~agl~~GD~I~~v 56 (87)
T 4e34_A 1 GPIRKVLLLKEDHEGLGISITGGKEH-GVPILISEIHPGQPADRCGGLHVGDAILAV 56 (87)
T ss_dssp CCCEEEEEECCTTBCCCEEEEEEGGG-TEEEEEEEECTTSHHHHHSCCCTTEEEEEE
T ss_pred CCEEEEEEEECCCCcccEEEEccCCC-CCCEEEEEECCCCHHHhcCCCCCCCEEEEE
Confidence 35788999998 67999999999764 468999999999999997779999999986
No 44
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.31 E-value=5.1e-12 Score=74.19 Aligned_cols=52 Identities=33% Similarity=0.589 Sum_probs=47.1
Q ss_pred cEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++|+|.|+..||||++.++.+ ..+++|..|.|++||++.| |++||+|++|
T Consensus 3 ~~r~v~l~r~~~g~G~~~~~~~~--~~g~~V~~V~~~spA~~aG-L~~GD~I~~i 54 (91)
T 1g9o_A 3 LPRLCCLEKGPNGYGFHLHGEKG--KLGQYIRLVEPGSPAEKAG-LLAGDRLVEV 54 (91)
T ss_dssp CCEEEEEECBTTBCCEEEEECTT--CSSEEEEEECTTSHHHHTT-CCTTCEEEEE
T ss_pred ccEEEEEEeCCCcccEEEEecCC--CCCEEEEEECCCCHHHHCC-CCCCCEEEEE
Confidence 45789999998899999999876 4689999999999999988 9999999986
No 45
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.31 E-value=9.7e-13 Score=80.49 Aligned_cols=57 Identities=26% Similarity=0.581 Sum_probs=51.4
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+++.+.++|.|+..+|||++.++.+....+++|..|.+++||++.|+|++||+|++|
T Consensus 15 ~~~~~~v~l~~~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~v 71 (116)
T 2dm8_A 15 PGQEMIIEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEV 71 (116)
T ss_dssp TTSCEEEEEECCSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEE
T ss_pred CCCEEEEEEEECCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEE
Confidence 467788999999899999999988764469999999999999999999999999986
No 46
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.31 E-value=1.9e-12 Score=78.94 Aligned_cols=55 Identities=38% Similarity=0.660 Sum_probs=48.5
Q ss_pred cEEEEEEecCCCcccEEEec---CCCC--CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAG---HKDR--TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~G---g~~~--~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..+|+|.|+..+|||++.+ +.+. ...+++|..|.|++||++.|+|++||+|++|
T Consensus 4 ~~~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~v 63 (113)
T 2g5m_B 4 ELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEV 63 (113)
T ss_dssp EEEEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEE
T ss_pred EEEEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 56789999998999999999 5542 2569999999999999999999999999986
No 47
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.30 E-value=2.6e-12 Score=77.55 Aligned_cols=57 Identities=25% Similarity=0.404 Sum_probs=49.3
Q ss_pred CCCcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccC-CCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTG-SVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG-~L~~GD~ileV 76 (76)
....++.++|.|+ ..+|||++.|+.+. ..+++|..|.|++||++.| ||++||+|++|
T Consensus 14 ~~~~~~~v~l~~~~~~~~G~~~~gg~~~-~~~~~V~~V~~~spA~~aG~rL~~GD~Il~i 72 (107)
T 3nfk_A 14 PHDNLVLIRMKPDENGRFGFNVKGGYDQ-KMPVIVSRVAPGTPADLCVPRLNEGDQVVLI 72 (107)
T ss_dssp --CCCEEEEECCCTTSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHSSSCCCTTCEEEEE
T ss_pred CCCCEEEEEEEcCCCCCCCEEEEccCCC-CCCeEEEEECCCCchHHcCCccCCCCEEEEE
Confidence 3456899999998 48999999999874 4689999999999999999 69999999986
No 48
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=3.6e-12 Score=78.63 Aligned_cols=58 Identities=28% Similarity=0.511 Sum_probs=50.1
Q ss_pred CCCcEEEEEEecCC-------CcccEEEecCCCCC----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERSH-------TGLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~~-------~gLG~si~Gg~~~~----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+-..+.|+|.|.. .+|||+|.|+.+.+ ..++||..|.|++||++.|+|++||+|++|
T Consensus 9 ~~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~v 77 (117)
T 1ujd_A 9 YIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEW 77 (117)
T ss_dssp CSSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEE
T ss_pred CCCceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 44567889999886 79999999998742 358999999999999999999999999986
No 49
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.30 E-value=2.6e-12 Score=75.45 Aligned_cols=55 Identities=29% Similarity=0.523 Sum_probs=48.8
Q ss_pred CcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|+|.|. ..+|||++.++.+. ..+++|..|.|++||++.|.|++||+|++|
T Consensus 3 ~~~~~v~l~k~~~~~lG~~i~~~~~~-~~g~~V~~V~~~spA~~aggl~~GD~I~~i 58 (90)
T 1qav_A 3 LQRRRVTVRKADAGGLGISIKGGREN-KMPILISKIFKGLAADQTEALFVGDAILSV 58 (90)
T ss_dssp SSCEEEEEECCTTTCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTTCCCTTEEEEEE
T ss_pred CccEEEEEEeCCCCCcCEEEEcccCC-CCCEEEEEECCCCHHHhcCCCCCCCEEEEE
Confidence 45788999996 78999999998774 478999999999999998789999999986
No 50
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.30 E-value=8.2e-12 Score=78.92 Aligned_cols=62 Identities=24% Similarity=0.363 Sum_probs=51.5
Q ss_pred hhcCCCCCcEEEEEEecC-CCcccEEEecCCCCC-----------CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 14 KKYGSLGPDLVVVTLERS-HTGLGISLAGHKDRT-----------KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 14 ~~~~~~~~e~~~v~L~k~-~~gLG~si~Gg~~~~-----------~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..|.+...+.++|+|.|. ..+|||+|.|+.+.. ..+++|..|.+++||++.| |++||+|++|
T Consensus 19 ~~~s~~~~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~V 92 (132)
T 3l4f_D 19 GSGSDYIIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEV 92 (132)
T ss_dssp CCSCCCCCCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEE
T ss_pred CCCCCcCCCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 344555567789999996 689999999998732 1379999999999999999 9999999986
No 51
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.29 E-value=5.1e-12 Score=83.34 Aligned_cols=56 Identities=38% Similarity=0.635 Sum_probs=48.9
Q ss_pred CcEEEEEEecCCCcccEEEec---CCCC--CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAG---HKDR--TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~G---g~~~--~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+..+|+|.|+..||||+|.+ +.+. ...+|||..|.+++||+++|+|++||+|++|
T Consensus 79 ~~~~~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~V 139 (170)
T 3egg_C 79 LELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEV 139 (170)
T ss_dssp SEEEEEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred ceEEEEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEE
Confidence 467889999998899999999 4432 2468999999999999999999999999986
No 52
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.29 E-value=5.2e-12 Score=75.07 Aligned_cols=55 Identities=25% Similarity=0.525 Sum_probs=48.2
Q ss_pred cEEEEEEec-CCCcccEEEecCCCCC-----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLER-SHTGLGISLAGHKDRT-----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k-~~~gLG~si~Gg~~~~-----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++|+|.| ...+|||+|.++.+.. ..+++|..|.|++||++.|+|++||+|++|
T Consensus 5 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~i 65 (98)
T 1ihj_A 5 LIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSL 65 (98)
T ss_dssp EEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEE
T ss_pred eEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 367899999 4889999999998743 248999999999999999999999999986
No 53
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.27 E-value=1.2e-11 Score=73.67 Aligned_cols=55 Identities=29% Similarity=0.531 Sum_probs=48.7
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|+|.|...+|||++.++.+. ..+++|..|.|++||++.|+|++||+|++|
T Consensus 4 ~~~~~v~l~~~~~~lG~~i~~~~~~-~~~~~V~~V~~~spA~~aG~l~~GD~I~~v 58 (97)
T 1n7e_A 4 AIIYTVELKRYGGPLGITISGTEEP-FDPIIISSLTKGGLAERTGAIHIGDRILAI 58 (97)
T ss_dssp CCEEEEEEECTTSCCCEEEECCSST-TSCCEEEEECTTSHHHHHTCCCTTCEEEEE
T ss_pred ceEEEEEEEeCCCCcCEEEEcccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEE
Confidence 4678899988888899999988653 468999999999999999999999999986
No 54
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.27 E-value=8.8e-12 Score=75.33 Aligned_cols=61 Identities=28% Similarity=0.480 Sum_probs=50.4
Q ss_pred cCCCCCcEEEEEEe--cCCCcccEEEecCCCC----CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 16 YGSLGPDLVVVTLE--RSHTGLGISLAGHKDR----TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 16 ~~~~~~e~~~v~L~--k~~~gLG~si~Gg~~~----~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
++....+...++|. +...+|||++.++.+. ...+++|..|.|++||++.|+|++||+|++|
T Consensus 6 ~~~~~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~v 72 (108)
T 2jre_A 6 SDASGFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRV 72 (108)
T ss_dssp CSSSSCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEE
T ss_pred ccccCcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEE
Confidence 34444567889994 5588999999998763 2458999999999999999999999999986
No 55
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.27 E-value=4.5e-12 Score=76.64 Aligned_cols=55 Identities=31% Similarity=0.629 Sum_probs=48.1
Q ss_pred CcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...++|+|.|. ..+|||++.|+.+. ..+++|..|.|++||++.+.|++||+|++|
T Consensus 8 ~~~~~v~l~~~~~~~lG~~l~~g~~~-~~~~~V~~V~~~s~A~~a~gL~~GD~Il~I 63 (103)
T 2dc2_A 8 GPIRKVLLLKEDHEGLGISITGGKEH-GVPILISEIHPGQPADRCGGLHVGDAILAV 63 (103)
T ss_dssp -CEEEEEEECCSSSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHHTCCCSSEEEEEE
T ss_pred CCcEEEEEEeCCCCccCEEEEeccCC-CCCEEEEEECCCCHHHHhCCCCCCCEEEEE
Confidence 45788999887 68999999999874 468999999999999998789999999986
No 56
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=6.9e-12 Score=77.42 Aligned_cols=56 Identities=25% Similarity=0.469 Sum_probs=49.2
Q ss_pred CcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...+.|+|.|. ..+|||++.++.+....++||..|.|++||++.|+|++||+|++|
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~I 70 (117)
T 1v62_A 14 SGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSI 70 (117)
T ss_dssp SSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEE
T ss_pred CCcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 35688999998 489999999987754456999999999999999999999999986
No 57
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.27 E-value=1.1e-11 Score=76.92 Aligned_cols=54 Identities=24% Similarity=0.358 Sum_probs=48.4
Q ss_pred cEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..++|+|.|. ..+|||++.||.+. ..+++|..|.+++||++.|+|++||+|++|
T Consensus 19 ~~~~v~l~k~~~~~lG~~i~gg~~~-~~~~~V~~v~~gspA~~aG~L~~GD~Il~i 73 (125)
T 3hpk_A 19 VPGKVTLQKDAQNLIGISIGGGAQY-CPCLYIVQVFDNTPAALDGTVAAGDEITGV 73 (125)
T ss_dssp EEEEEEEECCTTSCCCEEEEECSSC-CSSEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred CCeEEEEEeCCCCCcCEEEeccCCC-CCCEEEEEeCCCCHHHHCCCCCCCCEEEEE
Confidence 4578899998 67999999999874 578999999999999999999999999986
No 58
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.26 E-value=7.5e-12 Score=76.90 Aligned_cols=57 Identities=25% Similarity=0.510 Sum_probs=51.1
Q ss_pred CCCCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 18 SLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 18 ~~~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.+.++|+|.|...||||++.++.+ ..+++|..|.+++||++.|+|++||+|++|
T Consensus 10 ~~~~~~~~v~l~k~~~glG~~l~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~v 66 (119)
T 1tp5_A 10 DIPREPRRIVIHRGSTGLGFNIVGGED--GEGIFISFILAGGPADLSGELRKGDQILSV 66 (119)
T ss_dssp CCCCSCEEEEEECTTSCCCEEEEECGG--GCCEEEEEECTTSHHHHHSCCCTTEEEEEE
T ss_pred CCCCccEEEEEEECCCCccEEEecCCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 456788999999998899999998875 368999999999999999999999999986
No 59
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.26 E-value=1.9e-11 Score=71.71 Aligned_cols=55 Identities=27% Similarity=0.376 Sum_probs=48.5
Q ss_pred CCCcEEEEEEecCC--CcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERSH--TGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~~--~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++++|+|.|.. .+|||++.++.+ ..+++|..|.+++||++.| |++||+|++|
T Consensus 3 ~~~~~~~v~l~k~~~~~~~G~~~~~~~~--~~gv~V~~V~~~spA~~aG-l~~GD~I~~v 59 (91)
T 1m5z_A 3 TPVELHKVTLYKDSGMEDFGFSVADGLL--EKGVYVKNIRPAGPGDLGG-LKPYDRLLQV 59 (91)
T ss_dssp SCCEEEEEEEECCTTCSSSSEEEEECTT--SSCEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred CCcceEEEEEEECCCCCCccEEEEeccC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 46789999999973 589999999876 3789999999999999988 9999999986
No 60
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.25 E-value=1.3e-11 Score=76.44 Aligned_cols=54 Identities=28% Similarity=0.520 Sum_probs=47.4
Q ss_pred cEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+++.+.+.+. .||||+|.|+.+.....++|.+|.+++||++.|.|++||+|++|
T Consensus 18 ~~~~~~~~~~-~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~I 71 (118)
T 1v6b_A 18 DVRLLRIKKE-GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAI 71 (118)
T ss_dssp CEEEEEEESC-SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEE
T ss_pred eEEEEEECCC-CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 5677788776 59999999998865567999999999999999889999999986
No 61
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=8e-12 Score=75.08 Aligned_cols=56 Identities=34% Similarity=0.533 Sum_probs=49.7
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCC-CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRT-KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~-~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.+.|+|.|+..||||++.++.+.. ..+++|..|.+++||++.|+|++||+|++|
T Consensus 10 ~~~~~v~l~~~~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~v 66 (104)
T 2djt_A 10 SGHFSVELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHI 66 (104)
T ss_dssp CCCEEEEEECCSSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEE
T ss_pred CceEEEEEEeCCCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 45688999999899999999987642 568999999999999999999999999986
No 62
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=1.2e-11 Score=76.07 Aligned_cols=56 Identities=25% Similarity=0.434 Sum_probs=48.9
Q ss_pred CCcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhccc-CCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKT-GSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~d-G~L~~GD~ileV 76 (76)
.++.++|+|.|+ ..+|||++.|+.+. ..+++|..|.+++||++. |.|++||+|++|
T Consensus 13 ~~~~~~v~l~k~~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~a~gGL~~GD~Il~i 70 (119)
T 2cs5_A 13 HDNLVLIRMKPDENGRFGFNVKGGYDQ-KMPVIVSRVAPGTPADLCVPRLNEGDQVVLI 70 (119)
T ss_dssp SSCCEEEEECCCSSSCCSEEEEEEGGG-TEEEEEEEECSSSTTTSSSSCCCTTCEEEEE
T ss_pred CCCeEEEEEEeCCCCCcCEEEecccCC-CCCeEEEEECCCCHHHHhhcCCCCCCEEEEE
Confidence 356789999998 45699999999874 468999999999999998 689999999986
No 63
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.23 E-value=1e-11 Score=75.46 Aligned_cols=49 Identities=33% Similarity=0.625 Sum_probs=41.0
Q ss_pred EecCCCcccEEEecCCCCC----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 28 LERSHTGLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 28 L~k~~~gLG~si~Gg~~~~----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..+..+|||+|.||.+.. +.+++|.+|.|++||++.|+|++||+|++|
T Consensus 8 ~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~V 60 (106)
T 4amh_A 8 VPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAV 60 (106)
T ss_dssp ----CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred CCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEE
Confidence 3444789999999999853 348999999999999999999999999986
No 64
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.23 E-value=2.6e-11 Score=71.77 Aligned_cols=54 Identities=39% Similarity=0.693 Sum_probs=47.7
Q ss_pred cEEEEEEecCCCcccEEEecCCCC-----CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDR-----TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~-----~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..++++.+...+|||+|.++.+. ...+++|..|.|++||++.| |++||+|++|
T Consensus 3 ~~~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~i 61 (97)
T 2w4f_A 3 EELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEV 61 (97)
T ss_dssp CEEEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred eEEEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEE
Confidence 457789999889999999998873 24789999999999999988 9999999985
No 65
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.23 E-value=5.7e-12 Score=77.23 Aligned_cols=57 Identities=26% Similarity=0.506 Sum_probs=50.5
Q ss_pred CCcEEEEEEecC-CCcccEEEecCCCCC--CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERS-HTGLGISLAGHKDRT--KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~-~~gLG~si~Gg~~~~--~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.+.|+|.|. ..+|||++.|+.+.. ..+++|..|.+++||++.|+|++||+|++|
T Consensus 18 ~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~i 77 (117)
T 2o2t_A 18 GRHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAI 77 (117)
T ss_dssp TSCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEE
T ss_pred CCeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEE
Confidence 357899999998 689999999988632 468999999999999999999999999986
No 66
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=4.1e-11 Score=72.69 Aligned_cols=58 Identities=36% Similarity=0.653 Sum_probs=50.7
Q ss_pred CCCCcEEEEEEecCCCcccEEEecCCCC-----CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 18 SLGPDLVVVTLERSHTGLGISLAGHKDR-----TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 18 ~~~~e~~~v~L~k~~~gLG~si~Gg~~~-----~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.+...++|.+...+|||+|.+|.+. ...+++|..|.+++||++.| |++||+|++|
T Consensus 11 ~~~~~~~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~i 73 (110)
T 1x5q_A 11 RIEEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEV 73 (110)
T ss_dssp CCCCEEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred cCCcceEEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 4456778899999999999999999863 35789999999999999988 9999999986
No 67
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.22 E-value=2.4e-11 Score=71.25 Aligned_cols=52 Identities=21% Similarity=0.489 Sum_probs=47.0
Q ss_pred cEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++|+|.|+..||||++.++.+ ..+++|..|.|++||++.| |++||+|++|
T Consensus 4 ~~r~v~l~k~~~g~G~~~~~~~~--~~gv~V~~V~~~spA~~aG-l~~GD~I~~i 55 (90)
T 2he4_A 4 RPRLCHLRKGPQGYGFNLHSDKS--RPGQYIRSVDPGSPAARSG-LRAQDRLIEV 55 (90)
T ss_dssp CCEEEEEECBTTBCCEEEEECSS--SSSEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred CcEEEEEEECCCCccEEEEccCC--CCCEEEEEECCCChHHHCC-CCCCCEEEEE
Confidence 46889999998899999998876 4689999999999999988 9999999985
No 68
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.22 E-value=6.6e-12 Score=78.59 Aligned_cols=59 Identities=29% Similarity=0.370 Sum_probs=50.5
Q ss_pred CCCCcEEEEEEecC--CCcccEEEecCCCC--------CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 18 SLGPDLVVVTLERS--HTGLGISLAGHKDR--------TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 18 ~~~~e~~~v~L~k~--~~gLG~si~Gg~~~--------~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.+.+.|+|.|. ..+|||+|.++.+. ...+++|+.|.+++||++.|+|++||+|++|
T Consensus 25 ~~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~v 93 (128)
T 1nf3_C 25 ILPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEV 93 (128)
T ss_dssp TSCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEE
T ss_pred cCCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEE
Confidence 35577899999998 47999999998751 1247999999999999999999999999986
No 69
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.22 E-value=2.4e-11 Score=73.85 Aligned_cols=53 Identities=32% Similarity=0.528 Sum_probs=47.7
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.+.|+|.|...+|||++.++.+ .+++|..|.+++||++.|+|++||+|++|
T Consensus 14 ~~~~~v~l~~~~~~lG~~l~~~~~---~g~~V~~V~~~spA~~aG~l~~GD~I~~v 66 (111)
T 2dlu_A 14 GHVEEVELINDGSGLGFGIVGGKT---SGVVVRTIVPGGLADRDGRLQTGDHILKI 66 (111)
T ss_dssp SEEEEEEEECCSSCCCEEEECCSS---SSBEEEEECTTSSHHHHTCCCSSCEEEEE
T ss_pred CceEEEEEEeCCCccCEEEeccCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 357889999998899999998764 57999999999999999999999999986
No 70
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.21 E-value=4.2e-11 Score=72.60 Aligned_cols=60 Identities=23% Similarity=0.442 Sum_probs=50.5
Q ss_pred CCCCCcEEEEEEecCCCcccEEEecCCCC--CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 17 GSLGPDLVVVTLERSHTGLGISLAGHKDR--TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 17 ~~~~~e~~~v~L~k~~~gLG~si~Gg~~~--~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.-..+...++|.++..+|||++.++.+. ...+++|..|.+++||++.|+|++||+|++|
T Consensus 6 ~~~~~~~~~~~l~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~i 67 (111)
T 2koj_A 6 TKKVGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEV 67 (111)
T ss_dssp CSSSCEEEEEEEECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEE
T ss_pred CcccCcEEEEEEEECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEE
Confidence 33345677888999889999999988753 1368999999999999999999999999986
No 71
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=2.6e-11 Score=71.55 Aligned_cols=51 Identities=25% Similarity=0.423 Sum_probs=45.2
Q ss_pred EEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
++.|+|.|+ ..+|||++.++. ..+++|.+|.+++||++++.|++||+|++|
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~---~~~~~I~~V~~gspA~~~agL~~GD~I~~I 53 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNE---LNHCIVARIMHGGMIHRQGTLHVGDEIREI 53 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSC---GGGEEEEEECTTSHHHHHTCCCTTCEEEEE
T ss_pred eEEEEEEeCCCCceeEEEEeCC---CCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 578999999 589999999753 357999999999999998889999999986
No 72
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.20 E-value=2e-11 Score=76.89 Aligned_cols=54 Identities=24% Similarity=0.420 Sum_probs=45.7
Q ss_pred EEEEEEecC----------CCcccEEEecCCCCC--CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERS----------HTGLGISLAGHKDRT--KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~----------~~gLG~si~Gg~~~~--~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..+.|.|. ..+|||+|.||.+.. ..++||..|.+++||+++|+|++||+|++|
T Consensus 28 i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~i 93 (131)
T 1wfg_A 28 IGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEW 93 (131)
T ss_dssp EEEEEEECSCTTSCCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEE
T ss_pred eeEEEEeccceeEEEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 455666654 679999999988742 459999999999999999999999999986
No 73
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.20 E-value=2.8e-11 Score=75.35 Aligned_cols=57 Identities=23% Similarity=0.367 Sum_probs=49.1
Q ss_pred CCcEEEEEEec-CCCcccEEEecCCCC----CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLER-SHTGLGISLAGHKDR----TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k-~~~gLG~si~Gg~~~----~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.+.|+|.| ...+|||++.++.+. ...+++|..|.+++||++.|+|++||+|++|
T Consensus 13 ~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~v 74 (129)
T 2dmz_A 13 LFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAV 74 (129)
T ss_dssp CEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEE
T ss_pred CCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEE
Confidence 35678899966 488999999998763 2468999999999999999999999999986
No 74
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.20 E-value=7.5e-11 Score=70.86 Aligned_cols=58 Identities=28% Similarity=0.417 Sum_probs=47.5
Q ss_pred CCCcEEEEEEecC-CCcccEEEecCCC-CCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERS-HTGLGISLAGHKD-RTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~-~~gLG~si~Gg~~-~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++++.|+|.|. ..+|||++.+... ....+++|.+|.+++||++++.|++||+|++|
T Consensus 6 ~~~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~I 65 (101)
T 2yt7_A 6 SGDNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAI 65 (101)
T ss_dssp TTCCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEE
T ss_pred CCCceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 3467889999987 4799999985332 12347999999999999999999999999986
No 75
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.20 E-value=2.3e-11 Score=74.30 Aligned_cols=51 Identities=18% Similarity=0.249 Sum_probs=44.7
Q ss_pred cEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..+|+|.|. ..+|||++.+ ...+++|..|.|++||++.|+|++||+|++|
T Consensus 2 ~~~~v~L~k~~~~glG~~i~~----~~~gv~V~~V~~gspA~~aG~L~~GD~Il~I 53 (106)
T 2la8_A 2 EKFNVDLMKKAGKELGLSLSP----NEIGCTIADLIQGQYPEIDSKLQRGDIITKF 53 (106)
T ss_dssp EEEEEEECCBSSSTTCCEEEE----CSSSEEEEECCTTSCHHHHTTCCTTCEEEEE
T ss_pred eEEEEEEEeCCCCccCEEEEe----CCCCEEEEEECCCCHHHHCCCCCCCCEEEEE
Confidence 4678999855 7899999987 2468999999999999999999999999986
No 76
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.19 E-value=2.4e-11 Score=70.92 Aligned_cols=52 Identities=31% Similarity=0.453 Sum_probs=45.4
Q ss_pred cEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..+|+| ++..+|||++.||.+. ..+++|..|.|++||++.| |++||+|++|
T Consensus 3 ~~~~v~l-~~~~~~G~~l~~g~~~-~~~~~V~~V~~~spA~~aG-l~~GD~I~~i 54 (88)
T 2uzc_A 3 SNYSVSL-VGPAPWGFRLQGGKDF-NMPLTISSLKDGGKAAQAN-VRIGDVVLSI 54 (88)
T ss_dssp CEEEEEE-ESSSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTCEEEEE
T ss_pred cEEEEEE-cCCCcccEEEECcCCC-CCCeEEEEECCCChHHHcC-CCCCCEEEEE
Confidence 3567888 6678999999999874 5689999999999999988 9999999986
No 77
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.19 E-value=4.5e-11 Score=72.04 Aligned_cols=55 Identities=29% Similarity=0.495 Sum_probs=46.2
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCC-----------CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRT-----------KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~-----------~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.+.|+|.|+..||||++.++.+.. .+.+||..|.+++||++.| |++||+|++|
T Consensus 5 ~~~r~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~i 70 (107)
T 3qe1_A 5 GSPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEV 70 (107)
T ss_dssp -CCEEEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred CCcEEEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 34678999999889999999986532 2456799999999999998 9999999986
No 78
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.19 E-value=9.9e-12 Score=77.90 Aligned_cols=53 Identities=32% Similarity=0.643 Sum_probs=44.7
Q ss_pred EEEEEe-cCCCcccEEEecCCCC---CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 24 VVVTLE-RSHTGLGISLAGHKDR---TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 24 ~~v~L~-k~~~gLG~si~Gg~~~---~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+|+|. +...||||+|.++.+. ...++||..|.+++||+++|+|++||+|++|
T Consensus 27 ~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~V 83 (127)
T 1wg6_A 27 LEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAV 83 (127)
T ss_dssp EEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEE
T ss_pred EEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEE
Confidence 445665 4588999999998763 1358999999999999999999999999986
No 79
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.19 E-value=1.3e-11 Score=86.52 Aligned_cols=56 Identities=29% Similarity=0.487 Sum_probs=50.5
Q ss_pred CCcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.++|+|.|. ..||||+|.||.+. ..++||..|.+++||++++.|++||+|++|
T Consensus 75 ~~~~r~V~L~k~~~~glGf~I~gg~d~-~~gi~V~~V~~gspA~~~aGL~~GD~Il~V 131 (263)
T 1z87_A 75 LLQRRRVTVRKADAGGLGISIKGGREN-KMPILISKIFKGLAADQTEALFVGDAILSV 131 (263)
T ss_dssp SCSSEEECCCTTTTCCCCCEEEEETTT-TEEEEEEECCTTSHHHHCTTCCSSCEEEEE
T ss_pred CCccEEEEEEeCCCCCEeEEEeeccCC-CCCEEEEEECCCCHHHHhCCCCCCCEEEEE
Confidence 346789999998 68999999999885 578999999999999998889999999986
No 80
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=1.2e-11 Score=75.00 Aligned_cols=58 Identities=28% Similarity=0.498 Sum_probs=51.6
Q ss_pred CCCCCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 17 GSLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 17 ~~~~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.....+.+.|+|.|...+|||++.++.+ ..+++|..|.+++||++.|+|++||+|++|
T Consensus 10 ~~~~~~~~~v~l~k~~~glG~~l~~~~~--~~gv~V~~V~~~s~A~~aG~L~~GD~Il~V 67 (113)
T 1um7_A 10 GGDAREPRKIILHKGSTGLGFNIVGGED--GEGIFVSFILAGGPADLSGELRRGDRILSV 67 (113)
T ss_dssp CCCCCSEEEEEEECCSSCSSBCCBCCST--TCCCBCCCBCSSSHHHHTTCCCTTCEEEEE
T ss_pred CcCCCceEEEEEEECCCcccEEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 3455688999999998899999998876 468999999999999999999999999986
No 81
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.18 E-value=6.1e-11 Score=70.48 Aligned_cols=54 Identities=24% Similarity=0.444 Sum_probs=45.0
Q ss_pred CcEEEEEEecC-CCcccEEEec-------CCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERS-HTGLGISLAG-------HKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~-~~gLG~si~G-------g~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|+|.|+ ..+|||+|.+ +.+ ...+++|..|.+++||++.| |++||+|++|
T Consensus 3 ~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~-~~~~~~V~~V~~~spA~~aG-L~~GD~I~~i 64 (96)
T 2ego_A 3 QQRKVLTLEKGDNQTFGFEIQTYGLHHREEQR-VEMVTFVARVHESSPAQLAG-LTPGDTIASV 64 (96)
T ss_dssp CCEEEEEEECCTTCCCSEEEEEEEC--------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEE
T ss_pred CccEEEEEEeCCCCCccEEEEeccccccCCCC-CCCCeEEEEECCCChHHHcC-CCCCCEEEEE
Confidence 35688999999 4799999997 222 24689999999999999988 9999999986
No 82
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.18 E-value=2.7e-11 Score=71.45 Aligned_cols=54 Identities=17% Similarity=0.334 Sum_probs=46.7
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
|.+.+.++|.|+..+|||++.++.+. .+++|..|.+++||++.| |++||+|++|
T Consensus 3 p~~~r~v~l~~~~~~~G~~l~~~~~~--~~~~V~~v~~~spA~~aG-l~~GD~I~~i 56 (95)
T 3r68_A 3 PHQPRVVVIKKGSNGYGFYLRAGPEQ--KGQIIKDIEPGSPAEAAG-LKNNDLVVAV 56 (95)
T ss_dssp CCCCEEEEEECBTTBCSCEEEEC--C--CSEEEECCCTTSHHHHHT-CCTTEEEEEE
T ss_pred CCCcEEEEEecCCCcccEEEEecCCC--CCEEEEEECCCCHHHHCC-CCCCCEEEEE
Confidence 45668899999999999999987663 589999999999999998 9999999986
No 83
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.18 E-value=3.9e-11 Score=73.54 Aligned_cols=70 Identities=29% Similarity=0.463 Sum_probs=52.9
Q ss_pred CCCCCchhhhhhhcCCC----CCcEEEEEEecCCC-cccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 3 SFGNFSSDKVKKKYGSL----GPDLVVVTLERSHT-GLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 3 ~~~~~~~~~~~~~~~~~----~~e~~~v~L~k~~~-gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
|+|+.+.......|... ..++++|+|.|... +|||++.+. ..+++|..|.+++||++.|.|++||+|++|
T Consensus 2 ss~s~~p~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~lG~~i~~~----~~gv~V~~V~~~spA~~aGll~~GD~I~~v 76 (113)
T 1va8_A 2 SSGSSGPITDERVYESIGHYGGETVKIVRIEKARDIPLGATVRNE----MDSVIISRIVKGGAAEKSGLLHEGDEVLEI 76 (113)
T ss_dssp CCCCCSSCSCCCCSSCCSEETTEECEEEEEEECTTCCCCEEEEEC----SSSEEEEEECTTSHHHHHTCCCTTCEEEEE
T ss_pred CCCCCCCCCccccccccccCCCCceEEEEEEeCCCCceeEEEEeC----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEE
Confidence 34444444433333332 24678899999965 999999876 368999999999999999977999999986
No 84
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.18 E-value=5.8e-11 Score=69.83 Aligned_cols=55 Identities=25% Similarity=0.527 Sum_probs=47.5
Q ss_pred cEEEEEEecCCCcccEEEecCCCC---CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDR---TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~---~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..+++|.++..+|||++.++.+. ...+++|..|.+++||++.|+|++||+|++|
T Consensus 4 ~~~~v~l~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~v 61 (97)
T 2iwn_A 4 ETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAV 61 (97)
T ss_dssp EEEEEEEECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEE
T ss_pred EEEEEEEecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEE
Confidence 456788888888999999988652 2468999999999999999999999999986
No 85
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.18 E-value=8e-11 Score=69.62 Aligned_cols=51 Identities=29% Similarity=0.517 Sum_probs=43.3
Q ss_pred EEEEEEecCCCcccEEEecCCCC-------CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERSHTGLGISLAGHKDR-------TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~~~gLG~si~Gg~~~-------~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+|+|.|+. +|||+|.||.+. ...+++|..|.|++||++ .|++||+|++|
T Consensus 4 ~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~--gL~~GD~I~~v 61 (95)
T 1mfg_A 4 EIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK--LLQPGDKIIQA 61 (95)
T ss_dssp EEEEEEECSS-SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT--TCCTTCEEEEE
T ss_pred EEEEEECCCC-CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh--CCCCCCEEEEE
Confidence 4568888865 999999998752 346899999999999999 69999999986
No 86
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.17 E-value=9.7e-11 Score=70.57 Aligned_cols=54 Identities=24% Similarity=0.449 Sum_probs=47.2
Q ss_pred CcEEEEEEecC-CCcccEEEecCCCCC-----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERS-HTGLGISLAGHKDRT-----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~-~~gLG~si~Gg~~~~-----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|+|.|+ ..+|||++.|+.+.+ ..+++|..|.|++||+ ..|++||+|++|
T Consensus 6 ~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~--agl~~GD~I~~v 65 (107)
T 2h2b_A 6 WEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE--GQLQENDRVAMV 65 (107)
T ss_dssp EEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB--TTBCTTCEEEEE
T ss_pred ceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh--hCCCCCCEEEEE
Confidence 46789999999 589999999988742 4699999999999999 579999999986
No 87
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.17 E-value=6.3e-11 Score=73.09 Aligned_cols=55 Identities=24% Similarity=0.324 Sum_probs=47.2
Q ss_pred CcEEEEEEecCC-CcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSH-TGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~-~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|+|.|+. .+|||++.++.+. ..+++|..|.+++||++.|+|++||+|++|
T Consensus 23 ~~~~~V~l~~~~~~~lG~~l~~~~~~-~~~~~V~~V~~gspA~~aG~L~~GD~I~~I 78 (114)
T 2gzv_A 23 MVPGKVTLQKDAQNLIGISIGGGAQY-CPCLYIVQVFDNTPAALDGTVAAGDEITGV 78 (114)
T ss_dssp CCCEEEEEECCTTSCCSEEEEECCC---CCEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred CCCEEEEEEECCCCcEeEEEEeCCCC-CCCEEEEEECCCChHHHCCCCCCCCEEEEE
Confidence 456889999994 5699999998764 468999999999999999999999999986
No 88
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.16 E-value=7.1e-11 Score=71.21 Aligned_cols=54 Identities=26% Similarity=0.515 Sum_probs=47.6
Q ss_pred CcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|+|.|. ..+|||++.++.+. ..+++|..|.+++||++.| |++||+|++|
T Consensus 14 ~~~~~v~l~k~~~~~lG~~~~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~i 68 (104)
T 1wi2_A 14 FLPRIVTLKKPPGAQLGFNIRGGKAS-QLGIFISKVIPDSDAHRAG-LQEGDQVLAV 68 (104)
T ss_dssp SCCEEEEECCCTTCCCSEEEECCSSS-CCCCEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred CCCEEEEEEeCCCCCccEEEEcccCC-CCCEEEEEeCCCChHHHcC-CCCCCEEEEE
Confidence 45688999998 48999999998764 4689999999999999988 9999999986
No 89
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.16 E-value=5.1e-11 Score=71.49 Aligned_cols=55 Identities=29% Similarity=0.508 Sum_probs=46.6
Q ss_pred CCCcEEEEEEecCCCcccEEEecCCCC-------CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERSHTGLGISLAGHKDR-------TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~~~gLG~si~Gg~~~-------~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..+..+|+|.|+. +|||++.||.+. ...+++|..|.|++||++ .|++||+|++|
T Consensus 8 ~~~~~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~--gL~~GD~I~~v 69 (103)
T 1n7t_A 8 LAKQEIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK--LLQPGDKIIQA 69 (103)
T ss_dssp SSCCCEEEEEECSS-CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS--SCCTTCEEEEE
T ss_pred cccEEEEEEEccCC-CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH--CCCCCCEEEEE
Confidence 34566789999875 999999998752 356899999999999999 69999999986
No 90
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.16 E-value=4.8e-11 Score=73.28 Aligned_cols=53 Identities=25% Similarity=0.557 Sum_probs=46.2
Q ss_pred cEEEEEEecCC-CcccEEEecCCCCC-----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSH-TGLGISLAGHKDRT-----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~-~gLG~si~Gg~~~~-----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++|+|.|+. .+|||+|.|+.+.+ ..+++|..|.|++||+ +.|++||+|++|
T Consensus 14 ~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~--~gL~~GD~I~~V 72 (117)
T 2csj_A 14 EQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD--GLLQENDRVVMV 72 (117)
T ss_dssp EEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH--HHBCTTCEEEEE
T ss_pred eEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc--ccCCCCCEEEEE
Confidence 56789999984 89999999998742 4689999999999995 779999999986
No 91
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=1.2e-11 Score=73.91 Aligned_cols=55 Identities=35% Similarity=0.652 Sum_probs=48.6
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+...++|.|+..||||++.++.+. ..+++|..|.+++||++.|+|++||+|++|
T Consensus 10 ~~~~~v~l~~~~~g~G~~~~~~~~~-~~~~~V~~V~~~spA~~aG~l~~GD~I~~v 64 (103)
T 1wfv_A 10 FDYFTVDMEKGAKGFGFSIRGGREY-KMDLYVLRLAEDGPAIRNGRMRVGDQIIEI 64 (103)
T ss_dssp SCCEECCEECCTTSSSBCCEEETTT-TEEEECCCBCTTSHHHHHCSSCTTCEEEEE
T ss_pred ceEEEEEEecCCCcCCEEEeccccC-CCCEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 3567788988888999999998874 468999999999999999999999999986
No 92
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.14 E-value=2e-11 Score=71.84 Aligned_cols=53 Identities=19% Similarity=0.327 Sum_probs=45.9
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|+|.|+..+|||++.+..+ ..+++|..|.|++||++.| |++||+|++|
T Consensus 2 ~~pr~v~l~k~~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~i 54 (91)
T 2vsp_A 2 MKPKLCRLAKGENGYGFHLNAIRG--LPGSFIKEVQKGGPADLAG-LEDEDVIIEV 54 (91)
T ss_dssp CCEEEEEEECBTTBTSCCCBCCTT--CSCCBC-CCCTTSHHHHTT-CCTTCEEEEE
T ss_pred CCcEEEEEEeCCCcccEEEEeccC--CCCeEEEEECCCChHHHcC-CCCCCEEEEE
Confidence 357899999998899999998765 3678999999999999988 9999999986
No 93
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.14 E-value=8.9e-11 Score=72.75 Aligned_cols=58 Identities=22% Similarity=0.388 Sum_probs=49.7
Q ss_pred CCCcEEEEEEecC-CCcccEEEecCCC---CCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERS-HTGLGISLAGHKD---RTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~-~~gLG~si~Gg~~---~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...+.++|+|.|+ ..+|||+|.++.. ....+++|..|.+++||++.|+|++||+|++|
T Consensus 12 ~~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~i 73 (122)
T 1v5q_A 12 VHTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAI 73 (122)
T ss_dssp CCEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEE
T ss_pred ccceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 3457889999998 6899999999843 23467999999999999999999999999986
No 94
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.14 E-value=6.3e-11 Score=78.37 Aligned_cols=58 Identities=33% Similarity=0.505 Sum_probs=51.1
Q ss_pred CCCCCcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 17 GSLGPDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 17 ~~~~~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...+.+++.|+|.|. ..+|||++.|+.+. ..+++|..|.|++||++.| |++||+|++|
T Consensus 79 ~~~~~~~~~v~l~k~~~~~lG~~i~~~~~~-~~~~~V~~V~~gspA~~aG-L~~GD~Il~v 137 (192)
T 3k1r_A 79 PRRSRKLKEVRLDRLHPEGLGLSVRGGLEF-GCGLFISHLIKGGQADSVG-LQVGDEIVRI 137 (192)
T ss_dssp CCCCSSCEEEEEETTSTTCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTEEEEEE
T ss_pred CCCCCceEEEEEEeCCCCceeEEEEccccc-CCCEEEEEECCCChHHHcC-CCCCCEEEEE
Confidence 345567889999998 78999999998764 5789999999999999999 9999999986
No 95
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.14 E-value=8.2e-11 Score=69.68 Aligned_cols=54 Identities=26% Similarity=0.447 Sum_probs=46.2
Q ss_pred cEEEEEEecCCCcccEEEecCCCC-CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDR-TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~-~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..++|+|.|+..+|||++.+..+. ...+++|..|.|++||++.| |++||+|++|
T Consensus 3 ~~r~v~l~k~~~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~i 57 (96)
T 2v90_A 3 KPRCLHLEKGPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAV 57 (96)
T ss_dssp CCEEEEEECBTTBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEE
T ss_pred CCEEEEEEeCCCcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEE
Confidence 457899999988999999984432 24589999999999999988 9999999986
No 96
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.13 E-value=9.8e-11 Score=70.98 Aligned_cols=51 Identities=29% Similarity=0.488 Sum_probs=44.9
Q ss_pred EEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|.|. ..+||+++....+ .+++|.+|.|++||++.|+|++||+|++|
T Consensus 13 ~~~v~l~K~~~~~lG~~l~~~~~---~gv~V~~V~~gspA~~aG~L~~GD~Il~I 64 (97)
T 2ejy_A 13 VRLIQFEKVTEEPMGICLKLNEK---QSCTVARILHGGMIHRQGSLHVGDEILEI 64 (97)
T ss_dssp CEEEEEEECSSSCCSEEEEECTT---CCEEEEEECSSSHHHHHTCCCTTCEEEEE
T ss_pred cEEEEEEeCCCCCeeEEEEeCCC---CCEEEEEeCCCCHHHHcCCCCCCCEEEEE
Confidence 467999987 6799999986543 58999999999999999999999999986
No 97
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.13 E-value=1.7e-10 Score=69.94 Aligned_cols=54 Identities=28% Similarity=0.485 Sum_probs=46.0
Q ss_pred cEEEEEEecC-CCcccEEEecCCCCC-----------CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERS-HTGLGISLAGHKDRT-----------KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~-~~gLG~si~Gg~~~~-----------~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.+.++|.|. ..+|||+|.++.+.. ..+++|..|.+++||++.| |++||+|++|
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~v 72 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEV 72 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEE
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 4678899865 789999999998732 2379999999999999988 9999999986
No 98
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.12 E-value=7.6e-11 Score=69.94 Aligned_cols=46 Identities=20% Similarity=0.358 Sum_probs=40.8
Q ss_pred cEEEEEEecCC-CcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSH-TGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~-~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++|+|.|+. .+|||++.+| +|.++.+++||++.| |++||+|++|
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g--------~I~~v~~gspA~~aG-l~~GD~Il~V 50 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG--------KITSIVKDSSAARNG-LLTEHNICEI 50 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT--------EEEEECTTSHHHHHT-CCSSEEEEEE
T ss_pred ceEEEEEEECCCCCeEEEEECC--------EEEEecCCCHHHHcC-CCCCCEEEEE
Confidence 46889999994 5799999876 489999999999999 8999999986
No 99
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.12 E-value=9.6e-11 Score=69.83 Aligned_cols=51 Identities=18% Similarity=0.253 Sum_probs=44.3
Q ss_pred cEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..+++|.|. ..+|||++.+. ..+++|..|.|++||++.|+|++||+|++|
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~I~~I 59 (96)
T 2qkv_A 8 EKFNVDLMKKAGKELGLSLSPN----EIGCTIADLIQGQYPEIDSKLQRGDIITKF 59 (96)
T ss_dssp CCEEEEEECBTTBCCCEEEEEC----SSSEEEEEECTTSCHHHHHHCCTTCEEEEE
T ss_pred ceEEEEEEeCCCCCccEEEEeC----CCcEEEEEeCCCChHHhcCCCCCCCEEEEE
Confidence 4577899765 78999999872 367999999999999999999999999986
No 100
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.12 E-value=4.1e-11 Score=72.02 Aligned_cols=54 Identities=31% Similarity=0.417 Sum_probs=47.3
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+++..+|+|. +..+|||++.||.+. ..+++|..|.+++||++.| |++||+|++|
T Consensus 3 ~g~~~~v~l~-~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-L~~GD~I~~i 56 (103)
T 1wf7_A 3 SGSSGSVSLV-GPAPWGFRLQGGKDF-NMPLTISSLKDGGKASQAH-VRIGDVVLSI 56 (103)
T ss_dssp CCCCEEEEEE-SSSCCSCCEEEETTT-TEEEEECCCCTTCHHHHTT-CCTTCBEEEE
T ss_pred CCCEEEEEEe-CCCccCEEEeccccC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 4567889997 568999999999885 5679999999999999988 9999999985
No 101
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.12 E-value=1.6e-10 Score=69.17 Aligned_cols=53 Identities=17% Similarity=0.344 Sum_probs=46.9
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|+|.|+..+|||++.++.+ ..+++|..|.+++||++.| |++||+|++|
T Consensus 5 ~~~r~v~l~k~~~g~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~i 57 (102)
T 2d90_A 5 SSGRVVVIKKGSNGYGFYLRAGPE--QKGQIIKDIEPGSPAEAAG-LKNNDLVVAV 57 (102)
T ss_dssp SSSEEEEEECCSSSSSCEEEECSS--SSSEEEECCCTTSTTTTTT-CCTTCEEEEE
T ss_pred CCCEEEEEeeCCCCccEEEEeecC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 356889999998899999998654 4689999999999999988 9999999986
No 102
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=3e-10 Score=69.43 Aligned_cols=56 Identities=18% Similarity=0.334 Sum_probs=46.9
Q ss_pred CcEEEEEEecC-CCcccEEEecCCCCC------CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERS-HTGLGISLAGHKDRT------KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~-~~gLG~si~Gg~~~~------~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|+|.|. ..+|||+|.++.+.. ..+++|..|.+++||+++..|++||+|++|
T Consensus 9 ~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~i 71 (114)
T 1uew_A 9 LQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAV 71 (114)
T ss_dssp CCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEE
T ss_pred ccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEE
Confidence 35678999886 689999999987642 126799999999999997779999999986
No 103
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.11 E-value=2.6e-10 Score=70.75 Aligned_cols=58 Identities=24% Similarity=0.458 Sum_probs=49.3
Q ss_pred CCCcEEEEEEecCCCcccEEEecCCCCC--CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERSHTGLGISLAGHKDRT--KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~~~gLG~si~Gg~~~~--~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...+...+.|.+...+|||++.++.+.. ..+++|..|.|++||++.|+|++||+|++|
T Consensus 27 ~~~~~~~v~l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~I 86 (121)
T 2kom_A 27 KIGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEV 86 (121)
T ss_dssp CSCEEEEEEEECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEE
T ss_pred cCCeEEEEEEEcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 3446678888888889999999887531 368999999999999999999999999986
No 104
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=3.5e-11 Score=72.22 Aligned_cols=57 Identities=23% Similarity=0.343 Sum_probs=47.6
Q ss_pred CCCcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.++++.++++.+. ..+|||++.|+.+. ..+++|..|.|++||++.|.|++||+|++|
T Consensus 6 ~~~~~~~~~v~~~~~~~~G~~~~gg~~~-~~~v~V~~V~~~spA~~agGL~~GD~I~~i 63 (100)
T 2edp_A 6 SGGSFQYVPVQLQGGAPWGFTLKGGLEH-CEPLTVSKIEDGGKAALSQKMRTGDELVNI 63 (100)
T ss_dssp CCCCCEEEEEECCSCSCCCCCEEEEGGG-TEEEEECCCCTTSHHHHHTSCCTTCEEEEE
T ss_pred CCCCcEEEEEEECCCCCcCEEEeccCCC-CCCeEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 3456677777665 57999999998874 468999999999999999789999999986
No 105
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.10 E-value=1.1e-10 Score=68.31 Aligned_cols=51 Identities=37% Similarity=0.540 Sum_probs=43.9
Q ss_pred EEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+|++.+ ..+|||++.|+.+. ..+++|..|.|++||++.| |++||+|++|
T Consensus 4 ~~~v~~~~-~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-l~~GD~I~~i 54 (89)
T 2q3g_A 4 SFKVVLEG-PAPWGFRLQGGKDF-NVPLSISRLTPGGKAAQAG-VAVGDWVLSI 54 (89)
T ss_dssp EEEEEEES-SSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTCEEEEE
T ss_pred EEEEEEcC-CCcccEEEECcCCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 45677764 58999999998874 5689999999999999988 9999999986
No 106
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=1.1e-10 Score=69.83 Aligned_cols=56 Identities=32% Similarity=0.650 Sum_probs=48.8
Q ss_pred CCCcEEEEEEecC--CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERS--HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~--~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.+++++.|.|. ..+|||++.++.+. ..+++|..|.+++||++.| |++||+|++|
T Consensus 5 ~~~~~~~v~l~~~~~~~~lG~~~~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~i 62 (101)
T 1uez_A 5 SSGEVRLVSLRRAKAHEGLGFSIRGGSEH-GVGIYVSLVEPGSLAEKEG-LRVGDQILRV 62 (101)
T ss_dssp CSCCCEEECCCCCCTTTCSSEEEEECTTT-TCCEEEEEECTTSHHHHHT-CCSSCCEEEE
T ss_pred CCCccEEEEEEECCCCCcccEEEeCCCCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 4567888999874 67999999998774 4689999999999999988 9999999986
No 107
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.10 E-value=1.7e-10 Score=75.98 Aligned_cols=57 Identities=23% Similarity=0.382 Sum_probs=50.5
Q ss_pred CCcEEEEEEecC-CCcccEEEecCCCC---CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERS-HTGLGISLAGHKDR---TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~-~~gLG~si~Gg~~~---~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.++|+|.|+ ..||||++.++.+. ...+++|..|.|++||++.|+|++||+|++|
T Consensus 4 ~~~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~v 64 (196)
T 1p1d_A 4 HTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAI 64 (196)
T ss_dssp CCEEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEE
T ss_pred ccEEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 457889999999 68999999999763 2468999999999999999999999999985
No 108
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.09 E-value=1.6e-10 Score=89.25 Aligned_cols=55 Identities=35% Similarity=0.655 Sum_probs=50.3
Q ss_pred cEEEEEEecCCCcccEEEecCCCCC----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++|+|.|+..||||+|.||.+.+ ..++||+.|.|++||+++|+|++||+|++|
T Consensus 59 ~~~~v~l~k~~~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~V 117 (721)
T 2xkx_A 59 EYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFV 117 (721)
T ss_pred eEEEEEEEeCCCCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEE
Confidence 5688999999889999999999853 578999999999999999999999999986
No 109
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=6.7e-11 Score=71.18 Aligned_cols=53 Identities=28% Similarity=0.476 Sum_probs=47.1
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...++|+|.|+..+|||++.+..+ ..+++|..|.+++||++.| |++||+|++|
T Consensus 7 ~~~r~v~l~k~~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~v 59 (106)
T 2eei_A 7 GQPRLCYLVKEGGSYGFSLKTVQG--KKGVYMTDITPQGVAMRAG-VLADDHLIEV 59 (106)
T ss_dssp SSSEEEEEECCSSSCSCCEECCSS--CCSCEECCCCTTSHHHHHT-CCSSEEEEEE
T ss_pred CCCEEEEEEECCCCCCEEEEeccC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 456889999998999999997754 4689999999999999998 9999999986
No 110
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=6.5e-11 Score=70.16 Aligned_cols=53 Identities=19% Similarity=0.340 Sum_probs=45.7
Q ss_pred CCcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..++.|+|.|. ..+|||++.+. ..+++|.+|.|++||++.|.|++||+|++|
T Consensus 4 ~~~~r~v~l~k~~~~~lG~~i~~~----~~~v~V~~V~~~spA~~ag~L~~GD~I~~i 57 (91)
T 2e7k_A 4 GSSGRMVGIRKTAGEHLGVTFRVE----GGELVIARILHGGMVAQQGLLHVGDIIKEV 57 (91)
T ss_dssp CCCSCBCCBCCCTTCCCCEEEEES----SSSEEEEEECSSSHHHHHCCCCTTCEEEEE
T ss_pred CCCcEEEEEEECCCCcEeEEEEec----CCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 345677888876 77999999982 468999999999999999999999999986
No 111
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.08 E-value=3.2e-10 Score=67.29 Aligned_cols=51 Identities=24% Similarity=0.502 Sum_probs=45.3
Q ss_pred EEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|.|+..||||++.++.+ ..+++|..|.+++||++.| |++||+|++|
T Consensus 10 ~~~~~l~~~~~g~G~~~~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~i 60 (98)
T 2jxo_A 10 PRLCTMKKGPSGYGFNLHSDKS--KPGQFIRSVDPDSPAEASG-LRAQDRIVEV 60 (98)
T ss_dssp CEEEEEECTTTCCCEEEECCCS--SSCEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred cEEEEEEeCCCcccEEEEecCC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 4668899998899999998775 3589999999999999988 9999999986
No 112
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.07 E-value=1.3e-10 Score=67.22 Aligned_cols=50 Identities=28% Similarity=0.424 Sum_probs=42.7
Q ss_pred EEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 24 VVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 24 ~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..|+|. +..+|||++.|+.+. ..+++|..|.|++||++.| |++||+|++|
T Consensus 3 ~~v~l~-~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-l~~GD~I~~v 52 (85)
T 1rgw_A 3 YSVTLT-GPGPWGFRLQGGKDF-NMPLTISRITPGSKAAQSQ-LSQGDLVVAI 52 (85)
T ss_dssp EEEEEC-CSSCCCEEECCCGGG-TSCCBEEEECTTSHHHHSS-CCCCSBEEEE
T ss_pred EEEEEe-CCCccCEEEEeccCC-CCCeEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 567884 567999999998874 4679999999999999965 9999999986
No 113
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=1e-10 Score=72.68 Aligned_cols=57 Identities=32% Similarity=0.454 Sum_probs=47.5
Q ss_pred CCCcEEEEEEecCCC---cccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERSHT---GLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~~~---gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.+.+.++|.|... +|||+|.+..+....+++|..|.+++||++.| |++||+|++|
T Consensus 12 ~~~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~I 71 (114)
T 2d8i_A 12 CPKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEI 71 (114)
T ss_dssp SCCEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHT-CCTTCCEEEE
T ss_pred ccCceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcC-CCCCCEEEEE
Confidence 445789999999843 79999998554323589999999999999988 9999999986
No 114
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.07 E-value=3.6e-10 Score=68.67 Aligned_cols=57 Identities=32% Similarity=0.510 Sum_probs=45.5
Q ss_pred CCCcEEEEEEecCC---CcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERSH---TGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~~---~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.-+.+.++|.|+. .+|||++.+..+....+++|..|.|++||++.| |++||+|++|
T Consensus 3 ~~~~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~v 62 (94)
T 3kzd_A 3 MGKVTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEI 62 (94)
T ss_dssp -CCEEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTT-CCTTCEEEEE
T ss_pred cccceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 34467889999984 389999998655435689999999999999987 9999999986
No 115
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.06 E-value=6.7e-10 Score=65.67 Aligned_cols=51 Identities=27% Similarity=0.561 Sum_probs=45.3
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+...++|.|.|+..+|||++.+. .+++|..|.+++||++.| |++||+|++|
T Consensus 6 ~~~~r~v~l~~~~~~~G~~l~~~-----~g~~V~~V~~~spA~~aG-L~~GD~I~~i 56 (93)
T 2dls_A 6 SGVQRCVIIQKDQHGFGFTVSGD-----RIVLVQSVRPGGAAMKAG-VKEGDRIIKV 56 (93)
T ss_dssp CCCEEEEEEECSSSSCCEEEECS-----SSCEEEEECSSSTTTTTT-CCSSCEEEEE
T ss_pred CCCCEEEEEEeCCCceeEEEeCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 45678899999989999999863 468999999999999988 9999999986
No 116
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.64 E-value=1.5e-11 Score=75.90 Aligned_cols=55 Identities=31% Similarity=0.642 Sum_probs=47.9
Q ss_pred CcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.++++|.|.|. ..+|||++.++.+. ..+++|..|.|++||++++.|++||+|++|
T Consensus 26 ~~~~~v~l~k~~~~glG~~l~~g~~~-~~gv~V~~V~~~spA~~~aGL~~GD~Il~I 81 (112)
T 2lob_A 26 QGIRKVLLLKEDHEGLGISITGGKEH-GVPILISEIHPGQPADRCGGLHVGDAILAV 81 (112)
Confidence 35678899887 68999999998874 468999999999999997779999999986
No 117
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.06 E-value=2.8e-10 Score=68.10 Aligned_cols=53 Identities=25% Similarity=0.518 Sum_probs=43.2
Q ss_pred EEEEEEecCC----CcccEEEecCCCC-----------CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERSH----TGLGISLAGHKDR-----------TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~~----~gLG~si~Gg~~~-----------~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...+++.|.. .+|||++.|+.+. ...+++|..|.|++||++.| |++||+|++|
T Consensus 5 ~~~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~i 72 (104)
T 3sfj_A 5 VQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQV 72 (104)
T ss_dssp EEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred eEEEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEE
Confidence 3456666652 2699999988873 24689999999999999998 9999999985
No 118
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.05 E-value=2.4e-10 Score=72.79 Aligned_cols=57 Identities=23% Similarity=0.473 Sum_probs=47.2
Q ss_pred CCCcEEEEEEecCC----CcccEEEecCCCC-----------CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERSH----TGLGISLAGHKDR-----------TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~~----~gLG~si~Gg~~~-----------~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..+.+.|+|.|.. .+|||++.||.+. ...+++|..|.|++||++.| |++||+|++|
T Consensus 20 ~~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~v 91 (139)
T 2vz5_A 20 FQSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQV 91 (139)
T ss_dssp --CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred CCCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEE
Confidence 45678899998863 3899999998762 24689999999999999998 9999999986
No 119
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.05 E-value=1.7e-10 Score=73.06 Aligned_cols=52 Identities=21% Similarity=0.355 Sum_probs=46.6
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.+.++|.|+..+|||++.+. ..+++|..|.+++||++.|+|++||+|++|
T Consensus 26 ~~~~~~~l~k~~~glG~~i~~~----~~~v~V~~V~~gspA~~aG~L~~GD~Il~V 77 (126)
T 1wif_A 26 NKVIQTKLTVGNLGLGLVVIQN----GPYLQISHLINKGAAASDGILQPGDVLISV 77 (126)
T ss_dssp CCEEEEEEECCTTCCCCCEEEE----TTEEEECCCCTTSSGGGCSSSCTTCBEEEE
T ss_pred CceEEEEEecCCceEeEEEEcC----CCcEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 4677899999999999999873 367999999999999999999999999986
No 120
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=3.5e-10 Score=67.56 Aligned_cols=54 Identities=28% Similarity=0.423 Sum_probs=43.7
Q ss_pred EEEEEEecC-CCcccEEEecCCCCC--------CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERS-HTGLGISLAGHKDRT--------KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~-~~gLG~si~Gg~~~~--------~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++.|.|. ...|||++.++.+.. ..+++|..|.|++||++.|+|++||+|++|
T Consensus 5 p~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~i 67 (103)
T 2fcf_A 5 PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEV 67 (103)
T ss_dssp CEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEE
T ss_pred CEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEE
Confidence 478899888 478999999977621 258999999999999999999999999986
No 121
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.05 E-value=4.3e-10 Score=65.58 Aligned_cols=51 Identities=20% Similarity=0.307 Sum_probs=42.2
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|+|.|+..||||++.+..+ ..+++|..+ +++||+ ..|++||+|++|
T Consensus 2 ~~~~~v~l~k~~~g~G~~~~~~~~--~~~~~v~~v-~~spA~--aGl~~GD~I~~v 52 (88)
T 3bpu_A 2 MELITVHIVKGPMGFGFTIADSPG--GGGQRVKQI-VDSPRS--RGLKEGDLIVEV 52 (88)
T ss_dssp EEEEEEEEECBTTBSSCEEEECTT--SSSEEEEEC-CC--CC--TTCCTTCEEEEE
T ss_pred CcEEEEEEEcCCCceeEEEEecCC--CCcEEEEEe-cCChhH--hCCCCCCEEEEE
Confidence 478899999999999999997654 368999987 999999 469999999986
No 122
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=4.1e-10 Score=66.25 Aligned_cols=49 Identities=22% Similarity=0.432 Sum_probs=43.8
Q ss_pred cEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++|+|.|+..+|||++.+. .+++|..|.+++||++.| |++||+|++|
T Consensus 3 ~~r~v~l~~~~~g~G~~l~~~-----~~~~V~~V~~~spA~~aG-l~~GD~I~~v 51 (91)
T 2f5y_A 3 RYRQITIPRGKDGFGFTICCD-----SPVRVQAVDSGGPAERAG-LQQLDTVLQL 51 (91)
T ss_dssp EEEEEEEECBTTBTSEEEECS-----SSCEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred ceEEEEEEeCCCCccEEEecC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 468899999989999999864 358999999999999988 9999999986
No 123
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.04 E-value=3.6e-10 Score=70.55 Aligned_cols=62 Identities=26% Similarity=0.351 Sum_probs=46.2
Q ss_pred hhcCCCCCcEEEEEEecC-CCcccEEEecCCCC--------CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 14 KKYGSLGPDLVVVTLERS-HTGLGISLAGHKDR--------TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 14 ~~~~~~~~e~~~v~L~k~-~~gLG~si~Gg~~~--------~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
++|..... .+++++.|. ..+|||++.++.+. ...+++|..|.|++||++.|+|++||+|++|
T Consensus 17 d~~s~~~~-p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~V 87 (123)
T 2iwq_A 17 NLYFQSMQ-PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEV 87 (123)
T ss_dssp ------CC-CEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEE
T ss_pred cCCcccCC-CEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 44544433 377889888 57999999987652 1358999999999999999999999999986
No 124
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=4.3e-10 Score=67.17 Aligned_cols=56 Identities=29% Similarity=0.489 Sum_probs=47.7
Q ss_pred CCCcEEEEEEecCC-CcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERSH-TGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~~-~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
....+++|+|.|.. ..|||++.++.+. ..+++|..|.+++||++.| |++||+|++|
T Consensus 7 ~~~~~~~v~l~~~~~~~lG~~~~~~~~~-~~gv~V~~V~~~spA~~aG-L~~GD~I~~i 63 (100)
T 2eeh_A 7 GSDIIHSVRVEKSPAGRLGFSVRGGSEH-GLGIFVSKVEEGSSAERAG-LCVGDKITEV 63 (100)
T ss_dssp CCCEECCEEECCCSSSSCSEEEECCTTT-TCCEEEEEECTTSHHHHHT-CCSSCEEEEE
T ss_pred CCCeEEEEEEEECCCCCccEEEEccccC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 34567889999984 4699999988763 4689999999999999988 9999999986
No 125
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=2.2e-10 Score=67.81 Aligned_cols=52 Identities=21% Similarity=0.270 Sum_probs=44.6
Q ss_pred cEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.|+|. +..+|||++.||.+. ..+++|..|.|++||++.| |++||+|++|
T Consensus 8 ~~~~v~l~-~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-l~~GD~I~~i 59 (94)
T 2eeg_A 8 MPHSVTLR-GPSPWGFRLVGGRDF-SAPLTISRVHAGSKAALAA-LCPGDLIQAI 59 (94)
T ss_dssp CCEEEEEC-CSSCCSCCEECCTTT-TSCCEECCCCSSSHHHHTT-CCTTCEEEEE
T ss_pred ceEEEEEe-CCCccCEEEECccCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 34678884 457999999999885 5689999999999999987 9999999986
No 126
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.02 E-value=3.7e-10 Score=65.75 Aligned_cols=48 Identities=21% Similarity=0.386 Sum_probs=40.8
Q ss_pred EEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 26 VTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 26 v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+++ ++..+|||++.++.+. ..+++|..|.|++||++.| |++||+|++|
T Consensus 6 v~~-~~~~~lG~~l~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~i 53 (87)
T 2pa1_A 6 VDV-AGPAPWGFRITGGRDF-HTPIMVTKVAERGKAKDAD-LRPGDIIVAI 53 (87)
T ss_dssp EEE-CSSSCCSEEEEEEGGG-TEEEEEEEECSSSHHHHTT-CCTTCEEEEE
T ss_pred EEE-CCCCccCEEEecccCC-CCCEEEEEECCCChHHHcC-CCCCCEEEEE
Confidence 444 4478999999998874 5789999999999999966 9999999985
No 127
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.01 E-value=1.3e-10 Score=67.15 Aligned_cols=49 Identities=22% Similarity=0.455 Sum_probs=43.5
Q ss_pred cEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++|+|.|+..+|||++.++ .+++|..|.+++||++.| |++||+|++|
T Consensus 2 ~~r~v~l~~~~~g~G~~~~~~-----~~~~V~~V~~~spA~~aG-l~~GD~I~~i 50 (83)
T 2kv8_A 2 RVRSVEVARGRAGYGFTLSGQ-----APCVLSCVMRGSPADFVG-LRAGDQILAV 50 (83)
T ss_dssp CEEEEEECCCSSCCSCBCCCS-----SSCBCCBCCTTSTTTTTT-CCTTCEEEEE
T ss_pred CcEEEEEEeCCCcccEEEEcC-----CCeEEEEeCCCChHHHcC-CCCCCEEEEE
Confidence 468899999999999998764 368999999999999988 9999999986
No 128
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.00 E-value=1.3e-09 Score=66.24 Aligned_cols=53 Identities=23% Similarity=0.452 Sum_probs=44.8
Q ss_pred cEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+++++.+. ..+|||++.++.+. ..+++|..|.+++||++.| |++||+|++|
T Consensus 15 ~~~~v~~~~~~~~~lG~~l~~~~~~-~~gv~V~~V~~~s~A~~aG-L~~GD~Il~v 68 (114)
T 1x5n_A 15 KEKKVFISLVGSRGLGCSISSGPIQ-KPGIFISHVKPGSLSAEVG-LEIGDQIVEV 68 (114)
T ss_dssp SSEEEEECCCSSCCCCEEEEECCSS-SCSEEEEEECTTSTTTTTT-CCTTCEEEEE
T ss_pred CcEEEEEEEcCCCceeEEEeecCCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 3466777554 78999999998764 4689999999999999988 9999999986
No 129
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=7.8e-10 Score=67.69 Aligned_cols=53 Identities=25% Similarity=0.396 Sum_probs=47.2
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.++.+.|+|.+...+|||++.++.+ .+++|..|.|++||++.| |++||+|++|
T Consensus 17 l~~~~~v~l~~~~~~lG~~~~~~~~---~gv~V~~V~~~spA~~aG-L~~GD~Il~v 69 (117)
T 1uit_A 17 VEEPRHVKVQKGSEPLGISIVSGEK---GGIYVSKVTVGSIAHQAG-LEYGDQLLEF 69 (117)
T ss_dssp SCCCEEEEEECSSCCCCEEEEECTT---SCEEEEEECTTSHHHHHT-CCTTCEECEE
T ss_pred CCCCEEEEEEeCCCCccEEEEccCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 3567789999988899999998864 589999999999999998 9999999986
No 130
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.98 E-value=1e-09 Score=72.08 Aligned_cols=54 Identities=28% Similarity=0.398 Sum_probs=47.2
Q ss_pred cEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.++|.|. ..+|||+|.++.+. ..+++|..|.+++||++.+.|++||+|++|
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~~-~~~~~V~~v~~~spA~~aggl~~GD~I~~v 61 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGIDK-DGKPRVSNLRQGGIAARSDQLDVGDYIKAV 61 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTTS-SSCSEEEEECTTSHHHHTTSCCTTCEEEEE
T ss_pred CCEEEEEEeCCCCCCCEEEecccCC-CCCeEEEEECCCChHHhcCCCCCCCEEEEE
Confidence 3577888876 78999999999875 467899999999999998789999999986
No 131
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.98 E-value=1.2e-09 Score=67.51 Aligned_cols=52 Identities=23% Similarity=0.491 Sum_probs=46.5
Q ss_pred cEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.++|.|+..||||++.++.+ ..+++|..|.+++||++.| |++||+|++|
T Consensus 9 ~~r~v~l~~~~~g~G~~l~~~~~--~~gv~V~~V~~~spA~~aG-l~~GD~I~~i 60 (128)
T 2kjd_A 9 RPRLCTMKKGPSGYGFNLHSDKS--KPGQFIRSVDPDSPAEASG-LRAQDRIVEV 60 (128)
T ss_dssp CCEEEEEECCSSSCCEEEEECSS--SCSEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred CcEEEEEecCCCcccEEEEecCC--CCCEEEEEeCCCChHHHcC-CCCCCEEEEE
Confidence 46789999998899999998775 3589999999999999988 9999999985
No 132
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.97 E-value=1.6e-09 Score=65.58 Aligned_cols=52 Identities=27% Similarity=0.450 Sum_probs=45.6
Q ss_pred EEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.+|+|.|+ ..+|||++.+..+ ..+++|..|.+++||++.|-|++||+|++|
T Consensus 2 ~~~v~l~~~~~~glG~~~~~~~~--~~~~~V~~v~~~spA~~aGll~~GD~I~~i 54 (112)
T 1qau_A 2 VISVRLFKRKVGGLGFLVKERVS--KPPVIISDLIRGGAAEQSGLIQAGDIILAV 54 (112)
T ss_dssp EEEEEEECBTTTBTSEEEEECSS--SSCEEEEEECTTSHHHHHTCCCTTCEEEEE
T ss_pred EEEEEEEcCCCCceeEEEEecCC--CCCEEEEEeCCCChHHHcCCCCCCCEEEEE
Confidence 567999888 6899999998764 468999999999999999866999999985
No 133
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.95 E-value=1.2e-09 Score=64.23 Aligned_cols=45 Identities=33% Similarity=0.530 Sum_probs=38.7
Q ss_pred EEEEecC--CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 25 VVTLERS--HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 25 ~v~L~k~--~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.|.|. ..++||++.+ ++||.+|.+++||++.|+|++||+|++|
T Consensus 3 ~v~l~~~~~~~~~G~~~~~-------gv~V~~V~~gspA~~aG~L~~GD~Il~i 49 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGS-------QIFVKEMTRTGLATKDGNLHEGDIILKI 49 (88)
T ss_dssp EEEEECBTTBCCCCEEEEE-------EEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred EEEEEeCCCCCCCCEEEeC-------CEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 4566654 4689999875 6999999999999999999999999986
No 134
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.95 E-value=5.3e-10 Score=66.44 Aligned_cols=51 Identities=20% Similarity=0.283 Sum_probs=41.7
Q ss_pred EEEEecCCCcccEEEecCCCCC------CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 25 VVTLERSHTGLGISLAGHKDRT------KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 25 ~v~L~k~~~gLG~si~Gg~~~~------~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+++|.|+..++||++.++.... ..+++|..|.+++||++.| |++||+|++|
T Consensus 5 ~v~l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~i 61 (99)
T 3khf_A 5 PIVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHI 61 (99)
T ss_dssp CEEEEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred CEEEEeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 4778888899999999765421 1377999999999999988 9999999985
No 135
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.95 E-value=1.8e-09 Score=69.76 Aligned_cols=55 Identities=27% Similarity=0.562 Sum_probs=46.9
Q ss_pred cEEEEEEecCCCcccEEEecCCCCC----CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~----~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...+++|.+...+|||++.++.+.. ..+++|..|.|++||++.|+|++||+|++|
T Consensus 100 ~~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~V 158 (196)
T 3gsl_A 100 KVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAV 158 (196)
T ss_dssp EEEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred ccEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEE
Confidence 3456778788789999999887632 358999999999999999999999999986
No 136
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.94 E-value=1.3e-09 Score=63.90 Aligned_cols=50 Identities=22% Similarity=0.371 Sum_probs=42.7
Q ss_pred EEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 24 VVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 24 ~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.+++.. ..+|||++.++.+. ..+++|..|.|++||++.| |++||+|++|
T Consensus 5 ~~v~~~~-~~~~G~~l~~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~i 54 (91)
T 2pkt_A 5 QQIDLQG-PGPWGFRLVGGKDF-EQPLAISRVTPGSKAALAN-LCIGDVITAI 54 (91)
T ss_dssp EEEEEES-SSCCSEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTCEEEEE
T ss_pred EEEEECC-CCCCCEEEEccCCC-CCCeEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 4566654 57999999998774 4689999999999999987 9999999985
No 137
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.92 E-value=1.7e-09 Score=64.95 Aligned_cols=51 Identities=25% Similarity=0.318 Sum_probs=44.4
Q ss_pred EEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.++|.|. ..++||.+.++.+ ..+++|..|.|++||++.| |++||+|++|
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~i 53 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKD--TDGHLIRVIEEGSPAEKAG-LLDGDRVLRI 53 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTT--CCSCEEECCCTTSHHHHTT-CCTTCEEEEE
T ss_pred CEEEEEEeCCCCeeCEEEEEEeC--CCCEEEEEeCCCCHHHHcC-CCCCCEEEEE
Confidence 367889888 4799999998765 4679999999999999988 9999999986
No 138
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.88 E-value=2.8e-09 Score=69.55 Aligned_cols=43 Identities=30% Similarity=0.542 Sum_probs=37.6
Q ss_pred CCcccEEEecCCCC-------CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 32 HTGLGISLAGHKDR-------TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 32 ~~gLG~si~Gg~~~-------~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.||||+|.||.+. ...+++|..|.|++||++ .|++||+|++|
T Consensus 1 ~~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~--gl~~GD~I~~v 50 (195)
T 2qbw_A 1 SPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK--LLQPGDKIIQA 50 (195)
T ss_dssp CCCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT--TCCTTCEEEEE
T ss_pred CCcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh--CCCCCCEEEEE
Confidence 36899999999752 357999999999999999 59999999986
No 139
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.87 E-value=5.8e-09 Score=65.21 Aligned_cols=50 Identities=24% Similarity=0.236 Sum_probs=41.9
Q ss_pred CCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++++|+|.|+..||||+|.++. .+.+|++|.+ + +.++.|++||+|++|
T Consensus 10 ~~~~~~V~L~Kg~~G~GFsI~~~~----~g~~V~~I~~--~-~~~aGL~~GD~Il~V 59 (113)
T 3soe_A 10 AGLLVTIPLIKGPKGFGFAIADSP----TGQKVKMILD--S-QWCQGLQKGDIIKEI 59 (113)
T ss_dssp HCEEEEEEEECBTTBSSEEEEEET----TEEEEEEESC--G-GGSTTCCTTCEEEEE
T ss_pred CCCEEEEEEEECCCcccEEEeCCC----CCcEEEEecC--h-HHhCCCCCCCEEEEE
Confidence 468899999999999999997653 3578999998 3 456889999999986
No 140
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.86 E-value=1.1e-09 Score=67.90 Aligned_cols=56 Identities=27% Similarity=0.488 Sum_probs=48.1
Q ss_pred CCCcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.+.+.|+|.|+ ..+|||++.+..+ ..+++|..|.+++||++.|-|++||+|++|
T Consensus 5 ~~~~~~~v~l~~~~~~glG~~~~~~~~--~~~~~V~~V~~~spA~~aGll~~GD~I~~i 61 (127)
T 1b8q_A 5 IEPNVISVRLFKRKVGGLGFLVKERVS--KPPVIISDLIRGGAAEQSGLIQAGDIILAV 61 (127)
T ss_dssp CCCCSEEEEEECTTTSCCSCCEEECTT--SSCEEECCCSSSSSHHHHSSCCTTTCCCEE
T ss_pred cCCceEEEEEEeCCCCcEeEEEEecCC--CCCEEEEEeCCCCHHHHcCCCCCCCEEEEE
Confidence 3456788999998 4899999998764 468999999999999999866999999975
No 141
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.82 E-value=4.6e-09 Score=78.65 Aligned_cols=49 Identities=31% Similarity=0.655 Sum_probs=44.7
Q ss_pred EEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.|.|.|+ .+|||++.||.+ .+|||++|.+++||++.| |++||+|++|
T Consensus 2 ~r~V~l~k~-~~lG~~i~gg~~---~Gi~V~~V~~gspA~~aG-L~~GD~Il~V 50 (468)
T 3shw_A 2 MKLVKFRKG-DSVGLRLAGGND---VGIFVAGVLEDSPAAKEG-LEEGDQILRV 50 (468)
T ss_dssp EEEEEEECC-SSCCEEEEEETT---TEEEEEEECSSSHHHHTT-CCTTEEEEEE
T ss_pred ceEEEEecC-CccceEEEccCc---CCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 577999996 899999999975 689999999999999988 9999999986
No 142
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.82 E-value=5.9e-09 Score=62.56 Aligned_cols=52 Identities=23% Similarity=0.483 Sum_probs=43.0
Q ss_pred EEEEEecC-CCcccEEEecCCC------CCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 24 VVVTLERS-HTGLGISLAGHKD------RTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 24 ~~v~L~k~-~~gLG~si~Gg~~------~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.+.|.|. ..+|||+|.+... ....+++|..|.+++||++.| |++||+|++|
T Consensus 17 ~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~v 75 (104)
T 2z17_A 17 KLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANI 75 (104)
T ss_dssp CEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEE
T ss_pred eEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEE
Confidence 45668887 6789999998432 124689999999999999988 9999999975
No 143
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.81 E-value=8.4e-09 Score=64.32 Aligned_cols=51 Identities=31% Similarity=0.671 Sum_probs=42.7
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+..+.+.+.+ ..+|||++.++.+ .+++|..|.|++||++.| |++||+|++|
T Consensus 28 p~~~~~~~~~-~~~lG~~l~~~~~---~gv~V~~V~~gspA~~aG-L~~GD~Il~V 78 (124)
T 3tsv_A 28 PSMKLVKFRK-GDSVGLRLAGGND---VGIFVAGVLEDSPAAKEG-LEEGDQILRV 78 (124)
T ss_dssp CCCEEEEEEC-SSCCCEEEEECTT---SCEEEEEECTTCHHHHTT-CCTTEEEEEE
T ss_pred CCeEEEEcCC-CCceeEEEecCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 4455566655 4799999998765 689999999999999988 9999999986
No 144
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.81 E-value=1.7e-08 Score=62.58 Aligned_cols=54 Identities=28% Similarity=0.581 Sum_probs=45.4
Q ss_pred CcEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
++.+++++... ..+|||++.++.+. ..+++|..|.+++||++.| |++||+|++|
T Consensus 19 g~~~~v~v~~~~~~~lG~~~~~~~~~-~~gv~V~~V~~~spA~~aG-L~~GD~I~~v 73 (128)
T 1uf1_A 19 GDEKKVNLVLGDGRSLGLTIRGGAEY-GLGIYITGVDPGSEAEGSG-LKVGDQILEV 73 (128)
T ss_dssp SSEEEEEEECCSSCCCCEEEECCTTT-TCCCEEEEECTTCHHHHHT-CCTTCEEEEE
T ss_pred CcEEEEEEEECCCCccCEEEECcccC-CCCEEEEEECCCCHHHHCC-CCCCCEEEEE
Confidence 46677888765 47899999987653 4689999999999999987 9999999986
No 145
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=4.4e-09 Score=65.19 Aligned_cols=58 Identities=24% Similarity=0.488 Sum_probs=46.9
Q ss_pred CCCcEEEEEEecC--CCcccEEEecCCCC-CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERS--HTGLGISLAGHKDR-TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~--~~gLG~si~Gg~~~-~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.+...+++.|. ..+|||++....+. ...+++|..|.+++||++.|+|++||+|++|
T Consensus 16 ~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~i 76 (124)
T 1wh1_A 16 EELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQI 76 (124)
T ss_dssp SSCEECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEE
T ss_pred CcceEEEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 3446667777776 35899999977652 1368999999999999999989999999986
No 146
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.80 E-value=1.7e-09 Score=63.88 Aligned_cols=45 Identities=20% Similarity=0.372 Sum_probs=39.6
Q ss_pred cCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 30 RSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 30 k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
++..+|||++.++.+. ..+++|..|.|++||++.| |++||+|++|
T Consensus 13 ~~~~~lG~~l~~g~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~i 57 (94)
T 1vb7_A 13 AGPAPWGFRISGGRDF-HTPIIVTKVTERGKAEAAD-LRPGDIIVAI 57 (94)
T ss_dssp CSSSCCSBCCEEETTT-TEEEECCCBCTTSSHHHHT-CCTTCEEEEE
T ss_pred cCCCCccEEEecccCC-CCCeEEEEECCCCHHHHCC-CCCCCEEEEE
Confidence 4578999999998874 5689999999999999976 9999999986
No 147
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.79 E-value=1.1e-08 Score=62.29 Aligned_cols=52 Identities=25% Similarity=0.332 Sum_probs=45.2
Q ss_pred cEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.+++.|.+. ..+|||++.++.+ ..+++|..|.+++||++.| |++||+|++|
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-L~~GD~I~~i 65 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKD--TDGHLIRVIEEGSPAEKAG-LLDGDRVLRI 65 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTT--CCSCEEECCCTTCTTGGGT-CCTTCEEEEE
T ss_pred CCEEEEEeCCCCCcccEEEEEecC--CCCeEEEEeCCCChHHHcC-CCCCCEEEEE
Confidence 4588889887 7899999987655 4689999999999999988 9999999985
No 148
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.79 E-value=6.2e-10 Score=69.22 Aligned_cols=54 Identities=28% Similarity=0.482 Sum_probs=44.6
Q ss_pred cEEEEEEecCCCcccEEEecCCC-----------------------C----CCCcEEEEEeCCCChhcccCCCCCCCEEE
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKD-----------------------R----TKMAVFVCGLNPSGSASKTGSVLVGDELL 74 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~-----------------------~----~~~~I~V~~V~~gg~A~~dG~L~~GD~il 74 (76)
..++|+|.|+..||||+|.+.+. . ...+++|..|.+++||++.| |++||+|+
T Consensus 8 ~~r~v~l~r~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~ 86 (126)
T 2yuy_A 8 GPKTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRII 86 (126)
T ss_dssp SCCCEEEECCSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCCC
T ss_pred CCEEEEEEECCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEEE
Confidence 45679999998999999986321 0 13569999999999999998 99999999
Q ss_pred EC
Q psy18106 75 EI 76 (76)
Q Consensus 75 eV 76 (76)
+|
T Consensus 87 ~i 88 (126)
T 2yuy_A 87 KV 88 (126)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 149
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.78 E-value=1.3e-08 Score=78.66 Aligned_cols=54 Identities=26% Similarity=0.528 Sum_probs=48.6
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.+.|+|.|...+|||++.++.+ ..+++|+.|.++++|++.|+|++||+|++|
T Consensus 306 ~~~~~v~l~~~~~~lG~~i~~~~~--~~gv~V~~V~~gs~A~~aG~L~~GD~Il~V 359 (721)
T 2xkx_A 306 REPRRIVIHRGSTGLGFNIVGGED--GEGIFISFILAGGPADLSGELRKGDQILSV 359 (721)
T ss_pred cceEEEEEEECCCCccEEEeccCC--CCCeEEEEeCCCChHHhcCCCccCCEEEEE
Confidence 357889999988899999998865 468999999999999999999999999986
No 150
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.77 E-value=8.4e-09 Score=75.22 Aligned_cols=51 Identities=31% Similarity=0.683 Sum_probs=45.0
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+.+.|.+.|+ .+|||++.||.+ .+++|.+|.+++||++.| |++||+|++|
T Consensus 8 ~~~~~v~~~k~-~~lG~~i~gg~~---~gi~V~~V~~gspA~~aG-L~~GD~Il~V 58 (391)
T 3tsz_A 8 PSMKLVKFRKG-DSVGLRLAGGND---VGIFVAGVLEDSPAAKEG-LEEGDQILRV 58 (391)
T ss_dssp -CEEEEEEECC-SSCCEEEEEETT---TEEEEEEECTTCHHHHTT-CCTTEEEEEE
T ss_pred CCcEEEEeecC-CceeEEEEecCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 46788888886 479999999875 789999999999999999 9999999986
No 151
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.74 E-value=1.3e-08 Score=62.73 Aligned_cols=49 Identities=31% Similarity=0.360 Sum_probs=42.8
Q ss_pred cEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..++|.|.|+..+|||++.+. .+++|..|.|++||++.| |++||+|++|
T Consensus 23 ~~r~v~l~k~~~~~G~~l~~~-----~~v~V~~V~~gspA~~AG-L~~GD~Il~V 71 (109)
T 2vsv_A 23 MPRSIRFTAEEGDLGFTLRGN-----APVQVHFLDPYCSASVAG-AREGDYIVSI 71 (109)
T ss_dssp SCEEEEECCGGGCCCEEEESS-----SSCEEEEECTTSHHHHTT-CCTTCEEEEE
T ss_pred CCEEEEEEeCCCceeEEEeCC-----CCeEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 357899999989999999754 458999999999999977 9999999986
No 152
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.73 E-value=3.8e-08 Score=58.34 Aligned_cols=37 Identities=35% Similarity=0.614 Sum_probs=33.1
Q ss_pred CCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 31 SHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 31 ~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...+|||++.+| +|.+|.+++||++.| |++||+|++|
T Consensus 22 ~~~~lG~~~~~G--------~V~~V~~~spA~~aG-L~~GD~Il~I 58 (90)
T 1y7n_A 22 LRYQLGFSVQNG--------IICSLMRGGIAERGG-VRVGHRIIEI 58 (90)
T ss_dssp TTSCCCEEEETT--------EEEEECTTSHHHHHT-CCSSCEEEEE
T ss_pred CccccCeEecCC--------EEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 367999999754 899999999999988 9999999986
No 153
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.71 E-value=7.9e-09 Score=70.33 Aligned_cols=52 Identities=23% Similarity=0.491 Sum_probs=46.3
Q ss_pred cEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.|+|.|+..||||++.++.+ ..+++|..|.++++|++.| |++||+|++|
T Consensus 9 ~~r~v~l~k~~~glG~~l~~~~~--~~gv~V~~V~~gSpA~~aG-L~~GD~Il~V 60 (216)
T 2krg_A 9 RPRLCTMKKGPSGYGFNLHSDKS--KPGQFIRSVDPDSPAEASG-LRAQDRIVEV 60 (216)
T ss_dssp CCEEEEEECCSSSSCEEECCCSS--SCSCBEEEECTTSHHHHHT-CCTTCBCCEE
T ss_pred ceEEEEEEeCCCCceEEEEecCC--CCCeEEEEeCCCChHHHcC-CCCCCEEEEE
Confidence 45788999998899999998765 3589999999999999988 9999999986
No 154
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.70 E-value=4.2e-09 Score=76.41 Aligned_cols=57 Identities=19% Similarity=0.351 Sum_probs=47.5
Q ss_pred CCcEEEEEEecC-CCcccEEEecCCC-CCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 20 GPDLVVVTLERS-HTGLGISLAGHKD-RTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 20 ~~e~~~v~L~k~-~~gLG~si~Gg~~-~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.+.+.|+|.|. ..+|||+|.+... ....+++|..|.|++||++.|+|++||+|++|
T Consensus 202 ~~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~V 260 (388)
T 3suz_A 202 SENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSI 260 (388)
T ss_dssp SSCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEE
T ss_pred cccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEE
Confidence 456788999997 6899999998543 23456999999999999999999999999986
No 155
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.69 E-value=2e-08 Score=65.80 Aligned_cols=50 Identities=18% Similarity=0.240 Sum_probs=42.1
Q ss_pred EEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+++|.+. ..+|||++.++ ..++||..|.++++|++.|+|++||+|++|
T Consensus 114 ~~~v~l~~~~~~~lG~~~~~~----~~gv~V~~V~~gs~A~~aG~L~~GD~Il~V 164 (206)
T 3r0h_A 114 KFNVDLMKKAGKELGLSLSPN----EIGCTIADLIQGQYPEIDSKLQRGDIITKF 164 (206)
T ss_dssp EEEEEEECCTTCCCCEEEEEC----SSCEEEEEECTTSCHHHHHHCCTTCEEEEE
T ss_pred EEEEEEecCCCCccCeEEEcC----CceEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 456667666 46899999854 357999999999999999999999999986
No 156
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.68 E-value=5.7e-09 Score=62.42 Aligned_cols=49 Identities=22% Similarity=0.470 Sum_probs=42.7
Q ss_pred cEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+...++|.+...+|||++.+. .+++|..|.|++||++.| |++||+|++|
T Consensus 15 ~~~~v~l~~~~~g~G~~~~~~-----~~~~V~~V~~~spA~~aG-L~~GD~I~~v 63 (100)
T 1whd_A 15 EKLQITIRRGKDGFGFTICCD-----SPVRVQAVDSGGPAERAG-LQQLDTVLQL 63 (100)
T ss_dssp EEEEEEEECCSSSSSCBCCCS-----SSCBCCBCCTTSHHHHHT-CCSSCEEEEE
T ss_pred ceEEEEEECCCCeeeEEEeCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 456788888888999998764 468999999999999987 9999999986
No 157
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.67 E-value=4.8e-09 Score=62.95 Aligned_cols=53 Identities=23% Similarity=0.323 Sum_probs=43.6
Q ss_pred CcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
++..++.+. +..+|||++.++.+. ..+++|..|.+++||++.| |++||+|++|
T Consensus 4 g~~~~v~~~-~~~~lG~~l~~g~~~-~~~~~V~~V~~~spA~~aG-L~~GD~I~~i 56 (103)
T 1v5l_A 4 GSSGNVVLP-GPAPWGFRLSGGIDF-NQPLVITRITPGSKAAAAN-LCPGDVILAI 56 (103)
T ss_dssp CCCBCCEEE-SSSCCSBCCEEETTT-TEEEECSCBCTTSTTGGGT-CCTTCBEEEE
T ss_pred CCEEEEEEc-CCCCcCEEEeccccC-CCCeEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 344556664 457999999999874 4689999999999999976 9999999986
No 158
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.66 E-value=8.7e-08 Score=57.05 Aligned_cols=52 Identities=21% Similarity=0.274 Sum_probs=42.2
Q ss_pred CCCCcEEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 18 SLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 18 ~~~~e~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.+.++++|.|+..||||+|.+.. .+++|..|.++ |++ ..|++||+|++|
T Consensus 6 ~~~~~~~~v~l~~~~~g~G~~i~~~~----~Gv~V~~v~~~--a~~-aGL~~GD~I~~v 57 (96)
T 1ujv_A 6 SGQAELMTLTIVKGAQGFGFTIADSP----TGQRVKQILDI--QGC-PGLCEGDLIVEI 57 (96)
T ss_dssp CCCCCCEEEEEECCSSSSSEEEEEET----TEEEEEEESCG--GGS-TTCCSSCEEEEE
T ss_pred CCCceEEEEEEEeCCCceeEEEEcCC----CCEEEEEEecc--ccc-CCCCCCCEEEEE
Confidence 44567889999999999999997432 37999999993 444 679999999986
No 159
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.66 E-value=8.4e-09 Score=61.36 Aligned_cols=49 Identities=20% Similarity=0.458 Sum_probs=41.6
Q ss_pred CcEEEEEEecCC--CcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 21 PDLVVVTLERSH--TGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 21 ~e~~~v~L~k~~--~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...++|+|.|.. .+|||++.+ ..+++|..|.+++||+ ..|++||+|++|
T Consensus 7 ~~~~~v~l~~~~~~~~~G~~l~~-----~~~~~V~~V~~~spA~--agL~~GD~Il~i 57 (96)
T 2edv_A 7 GVRHTVKIDKDTLLQDYGFHISE-----SLPLTVVAVTAGGSAH--GKLFPGDQILQM 57 (96)
T ss_dssp CEEEEEEECCCSSSCSCSBCCCS-----SSSCBCCCBCSSSSST--TTSCTTCBEEEE
T ss_pred CccEEEEEEECCCCCcccEEEec-----CCCeEEEEECCCCchh--hCCCCCCEEEEE
Confidence 346789999884 589999987 3578999999999994 789999999986
No 160
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.65 E-value=4.8e-08 Score=62.70 Aligned_cols=50 Identities=28% Similarity=0.407 Sum_probs=44.0
Q ss_pred cEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++|+|.|. ..+|||++... ..+++|..|.|++||++.| |++||+|++|
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~----~~g~~V~~v~~~spA~~aG-l~~GD~I~~i 54 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSI----DNGIFVQLVQANSPASLVG-LRFGDQVLQI 54 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEE----TTEEEEEEECTTSHHHHTT-CCTTCEEEEE
T ss_pred CCEEEEEEeCCCCcEeEEEEeC----CCCEEEEEECCCChHHHcC-CCCCCEEEEE
Confidence 5688999997 57999999864 3689999999999999987 9999999985
No 161
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.65 E-value=6.4e-08 Score=56.29 Aligned_cols=47 Identities=32% Similarity=0.487 Sum_probs=39.2
Q ss_pred EEEEEEecC--CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERS--HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~--~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...|++.+. ...|||.+. .+++|..|.++++|++.|+|++||+|++|
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~-------~gv~V~~v~~~s~A~~aG~l~~GD~I~~i 51 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLA-------SHIFVKEISQDSLAARDGNIQEGDVVLKI 51 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEE-------EEEEEEEECTTCHHHHSCCCCTTCEEEEE
T ss_pred cEEEEEEeCCCCCCCCEEEe-------CCEEEEEECCCChHHhcCCCCCCCEEEEE
Confidence 355666655 468999876 57999999999999999889999999985
No 162
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.65 E-value=5.3e-08 Score=63.84 Aligned_cols=54 Identities=28% Similarity=0.512 Sum_probs=45.2
Q ss_pred EEEEEEecCCCcccEEEecCCCCC---CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERSHTGLGISLAGHKDRT---KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~~~gLG~si~Gg~~~~---~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...++|.+...+|||++.++.+.. ..+++|..|.++++|++.|+|++||+|++|
T Consensus 107 ~~~v~l~~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~i 163 (200)
T 2qt5_A 107 TVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSV 163 (200)
T ss_dssp EEEEEEECBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred EEEEEEecCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 345666677789999999886521 468999999999999999999999999986
No 163
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.53 E-value=2e-07 Score=52.64 Aligned_cols=44 Identities=25% Similarity=0.462 Sum_probs=36.6
Q ss_pred EEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 26 VTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 26 v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.+. ...|||.+. .+++|..|.+++||++.|+|++||+|++|
T Consensus 5 ~~~~~~~~~~~g~~~~-------~gv~V~~v~~~s~A~~aG~l~~GD~I~~i 49 (81)
T 2rcz_A 5 TLVKSRKNEEYGLRLA-------SHIFVKEISQDSLAARDGNIQEGDVVLKI 49 (81)
T ss_dssp EEECCSTTCCCCEEEE-------EEEEEEEECTTSHHHHHSSCCTTCEEEEE
T ss_pred EEEECCCCCCCCEEEe-------CCEEEEEECCCChHHHCCCCCCCCEEEEE
Confidence 344444 678999876 46999999999999999889999999985
No 164
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.45 E-value=2.9e-08 Score=60.95 Aligned_cols=47 Identities=32% Similarity=0.396 Sum_probs=41.0
Q ss_pred EEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 24 VVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 24 ~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
++|+|.|+..+|||++.+. .+++|..|.+++||++.| |++||+|++|
T Consensus 17 r~v~l~~~~~~~G~~l~~~-----~~v~V~~V~~~spA~~aG-L~~GD~Il~I 63 (111)
T 1vae_A 17 RGIHFTVEEGDLGFTLRGN-----TPVQVHFLDPHCSASLAG-AKEGDYIVSI 63 (111)
T ss_dssp CCCCEECCSSCCSCCEESS-----SSCEECCCCTTSSHHHHH-CCTTCEEEEE
T ss_pred eEEEEEcCCCcccEEEeCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 5688889889999999754 468999999999999976 9999999986
No 165
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.43 E-value=5.8e-07 Score=52.13 Aligned_cols=48 Identities=17% Similarity=0.386 Sum_probs=37.9
Q ss_pred EEEEEecC---CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 24 VVVTLERS---HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 24 ~~v~L~k~---~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+.+.+. ..+|||++... ..+++|..|.|++||++.| |++||+|++|
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~~----~~g~~V~~V~~~spA~~aG-l~~GD~I~~i 55 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKWD----IPGIFVASVEAGSPAEFSQ-LQVDDEIIAI 55 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEEE----TTEEEEEEECTTSHHHHTT-CCTTCEEEEE
T ss_pred eEEEEEecCCCCCcccEEEEec----CCCEEEEEECCCChHHHcC-CCCCCEEEEE
Confidence 34555554 23799998732 3589999999999999987 9999999985
No 166
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.39 E-value=6.3e-07 Score=58.69 Aligned_cols=54 Identities=26% Similarity=0.466 Sum_probs=43.2
Q ss_pred EEEEEEecC-CCcccEEEecCCCC-CCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERS-HTGLGISLAGHKDR-TKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~-~~gLG~si~Gg~~~-~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...++|.+. ..+|||++....+. ...+++|..|.+++||++.|+|++||+|++|
T Consensus 108 ~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~v 163 (196)
T 1p1d_A 108 TFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAI 163 (196)
T ss_dssp CEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEE
T ss_pred cEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEE
Confidence 345666643 56899999886542 2468999999999999999999999999985
No 167
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.23 E-value=1.8e-06 Score=53.15 Aligned_cols=49 Identities=18% Similarity=0.266 Sum_probs=41.2
Q ss_pred EEEEEEecCCCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 23 LVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 23 ~~~v~L~k~~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
...+-|.+...++||.+... ..+.+|..|.+++||++.| |++||+|++|
T Consensus 18 ~~~l~l~~~~~g~G~~l~~~----~~~~~I~~V~~gSpA~~AG-L~~GD~I~~I 66 (101)
T 3qik_A 18 AKRLLILPQEEDYGFDIEEK----NKAVVVKSVQRGSLAEVAG-LQVGRKIYSI 66 (101)
T ss_dssp EEEEEECCCSSSSSEEEEEE----TTEEEEEEECTTSHHHHHT-CCTTCBEEEE
T ss_pred cCeEEEEeCCCcccEEEEcc----CCCeEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 35677777788999999853 3568999999999999976 9999999986
No 168
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.98 E-value=1.6e-05 Score=49.00 Aligned_cols=57 Identities=19% Similarity=0.308 Sum_probs=38.6
Q ss_pred CCCcEEEEEEecC-CCcccEEEe--cCCCCCCCcEEEEEeCC--CChhcccCCCCCCCEEEEC
Q psy18106 19 LGPDLVVVTLERS-HTGLGISLA--GHKDRTKMAVFVCGLNP--SGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 19 ~~~e~~~v~L~k~-~~gLG~si~--Gg~~~~~~~I~V~~V~~--gg~A~~dG~L~~GD~ileV 76 (76)
++..++.+++.+. .+.+||++. ........+++|..|.+ ++||++.| |++||+|++|
T Consensus 12 ~~~~v~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~V 73 (118)
T 2yub_A 12 LPYSVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEI 73 (118)
T ss_dssp SCCEEEEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEE
T ss_pred CCceeEEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEE
Confidence 3344555555544 334555554 22112246899999999 99999976 9999999986
No 169
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.73 E-value=5.5e-05 Score=48.23 Aligned_cols=46 Identities=17% Similarity=0.301 Sum_probs=36.3
Q ss_pred cEEEEEEecC-CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 22 DLVVVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 22 e~~~v~L~k~-~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+.++++|.+. ...|||++.. + +|..|.++++|++.| |++||.|++|
T Consensus 88 ~~~~v~l~~~~~~~lG~~~~~-------g-~v~~v~~~s~a~~aG-l~~GD~I~~i 134 (166)
T 1w9e_A 88 FERTITMHKDSTGHVGFIFKN-------G-KITSIVKDSSAARNG-LLTEHNICEI 134 (166)
T ss_dssp TCEEEEEECCTTSCCSEEEET-------T-EEEEECTTSHHHHTT-CCSSEEEEEE
T ss_pred CcEEEEEecCCCCcEeEEEeC-------C-EEEEEccCCHHHHcC-CCCCCEEEEE
Confidence 4456666644 4678888871 2 899999999999987 9999999985
No 170
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.62 E-value=9.3e-06 Score=58.82 Aligned_cols=36 Identities=36% Similarity=0.650 Sum_probs=0.0
Q ss_pred CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 32 HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 32 ~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+|||++.++ +|..|.++++|++.| |++||+|++|
T Consensus 307 ~~~lG~~i~~g--------~I~~V~~gs~A~~aG-L~~GD~Il~V 342 (388)
T 3suz_A 307 KYQLGFSVQNG--------IICSLMRGGIAERGG-VRVGHRIIEI 342 (388)
T ss_dssp ---------------------------------------------
T ss_pred CCccceEEecC--------EEEEeecCCHHHHcC-CCCCCEEEEE
Confidence 45788887654 899999999999998 9999999986
No 171
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.50 E-value=4.6e-05 Score=50.61 Aligned_cols=41 Identities=15% Similarity=0.110 Sum_probs=29.5
Q ss_pred cccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCC-CEEEEC
Q psy18106 34 GLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVG-DELLEI 76 (76)
Q Consensus 34 gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~G-D~ileV 76 (76)
|++++..-+... ..+++|..|.|++||++.| |++| |+|++|
T Consensus 3 g~~~~~~~~~~~-~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~i 44 (209)
T 3rle_A 3 GSSQSVEIPGGG-TEGYHVLRVQENSPGHRAG-LEPFFDFIVSI 44 (209)
T ss_dssp -----CCCTTSS-SEEEEEEEECTTSHHHHTT-CCTTTEEEEEE
T ss_pred chhhhhhccCCC-CCEEEEEEECCCCHHHHCC-CCcCCeEEEEE
Confidence 455555544442 4689999999999999977 9999 999975
No 172
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=97.48 E-value=1.6e-05 Score=46.91 Aligned_cols=26 Identities=15% Similarity=0.356 Sum_probs=23.5
Q ss_pred cEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 49 AVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 49 ~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+++|..|.|++||++ | |++||.|++|
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~I 27 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISA 27 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEE
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEE
Confidence 578899999999999 6 9999999985
No 173
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.48 E-value=4.8e-05 Score=44.85 Aligned_cols=28 Identities=25% Similarity=0.383 Sum_probs=25.1
Q ss_pred CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 47 KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 47 ~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+++|..|.+++||++ | |++||.|++|
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~I 31 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAI 31 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEE
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEE
Confidence 35799999999999998 6 9999999985
No 174
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.34 E-value=0.00022 Score=52.25 Aligned_cols=44 Identities=16% Similarity=0.273 Sum_probs=35.0
Q ss_pred CCcccEEEecCCCCC-CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 32 HTGLGISLAGHKDRT-KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 32 ~~gLG~si~Gg~~~~-~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..|+|+++....+.+ ...++|..|.|++||++.| |++||+|++|
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~I 117 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMM 117 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEE
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEE
Confidence 468888887554421 2358999999999999987 9999999986
No 175
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.32 E-value=0.00014 Score=43.54 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=26.4
Q ss_pred CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 47 KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 47 ~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+++|..|.+++||++.| |++||.|++|
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~i 62 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAI 62 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEE
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEE
Confidence 4689999999999999977 9999999985
No 176
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=97.29 E-value=0.00027 Score=41.83 Aligned_cols=28 Identities=25% Similarity=0.322 Sum_probs=25.1
Q ss_pred CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 47 KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 47 ~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+++|..|.+++||+. .|++||.|++|
T Consensus 6 ~~Gv~V~~V~~~spA~~--GL~~GD~I~~I 33 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD--VLHAGDLITEI 33 (100)
T ss_dssp CCCEEEEEECTTSGGGG--TCCTTCEEEEE
T ss_pred CCCEEEEEeCCCCchHH--CCCCCCEEEEE
Confidence 46899999999999995 59999999985
No 177
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.21 E-value=0.00024 Score=42.52 Aligned_cols=29 Identities=17% Similarity=0.507 Sum_probs=26.1
Q ss_pred CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 47 KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 47 ~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+++|..|.+++||++.| |++||.|++|
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~i 62 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKV 62 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEE
Confidence 4689999999999999976 9999999985
No 178
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.16 E-value=0.0007 Score=44.82 Aligned_cols=43 Identities=16% Similarity=0.134 Sum_probs=33.5
Q ss_pred CcccEEEecCCCC--CCCcEEEEEeCCCChhcccCCCCC-CCEEEEC
Q psy18106 33 TGLGISLAGHKDR--TKMAVFVCGLNPSGSASKTGSVLV-GDELLEI 76 (76)
Q Consensus 33 ~gLG~si~Gg~~~--~~~~I~V~~V~~gg~A~~dG~L~~-GD~ileV 76 (76)
..||+++.--... ...+++|..|.+++||++.| |++ ||.|++|
T Consensus 95 ~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~i 140 (209)
T 3rle_A 95 GLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGA 140 (209)
T ss_dssp SSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEE
T ss_pred CccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEEC
Confidence 3678887643221 12689999999999999987 999 9999975
No 179
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.10 E-value=0.00057 Score=49.07 Aligned_cols=43 Identities=28% Similarity=0.463 Sum_probs=34.7
Q ss_pred CCcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 32 HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 32 ~~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..|+|+.+..-. ....+++|..|.+++||++.| |++||+|++|
T Consensus 84 ~~giG~~~~~~~-~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~I 126 (388)
T 1fc6_A 84 VTGVGLEITYDG-GSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTV 126 (388)
T ss_dssp CBBCSEEEEECT-TCSSCEEEEEECTTSHHHHTT-CCTTCEEEEE
T ss_pred eEEEEEEEEEee-cCCCcEEEEEeCCCChHHHcC-CCCCCEEEEE
Confidence 358999887431 113679999999999999987 9999999986
No 180
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=97.00 E-value=0.00067 Score=42.23 Aligned_cols=28 Identities=14% Similarity=0.105 Sum_probs=24.9
Q ss_pred CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 47 KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 47 ~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+++|..|.+++||+ .| |++||.|++|
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~i 83 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKV 83 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEE
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEE
Confidence 4689999999999999 55 9999999985
No 181
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=96.94 E-value=0.0012 Score=45.98 Aligned_cols=40 Identities=18% Similarity=0.403 Sum_probs=31.1
Q ss_pred cccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 34 GLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 34 gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.||+.+.-- ....+++|..|.+++||++.| |++||.|++|
T Consensus 230 ~lGi~~~~~--~~~~g~~V~~v~~~spA~~aG-l~~GD~I~~i 269 (324)
T 1y8t_A 230 SLGVQVTND--KDTLGAKIVEVVAGGAAANAG-VPKGVVVTKV 269 (324)
T ss_dssp ECCEEEESC--SSSSSEEEEEECTTSTTTTTT-CCTTCEEEEE
T ss_pred ccceEeeec--cCCCceEEEEECCCChHHHcC-CCCCCEEEEE
Confidence 566665421 124679999999999999976 9999999985
No 182
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=96.91 E-value=0.00045 Score=40.69 Aligned_cols=25 Identities=20% Similarity=0.303 Sum_probs=22.6
Q ss_pred EEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 51 FVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 51 ~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+|..|.+++||++.| |++||+|++|
T Consensus 5 ~V~~V~~~spA~~aG-l~~GD~I~~i 29 (95)
T 3id1_A 5 VVGEIAANSIAAEAQ-IAPGTELKAV 29 (95)
T ss_dssp BEEEECTTSHHHHTT-CCTTCEEEEE
T ss_pred EEEeeCCCCHHHHcC-CCCCCEEEEE
Confidence 688999999999966 9999999975
No 183
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=96.90 E-value=0.001 Score=41.27 Aligned_cols=28 Identities=25% Similarity=0.214 Sum_probs=25.3
Q ss_pred CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 47 KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 47 ~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+++|..|.+++||++. |++||+|++|
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~I 51 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESI 51 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEE
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEE
Confidence 468999999999999996 9999999985
No 184
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=96.84 E-value=0.00024 Score=40.82 Aligned_cols=27 Identities=22% Similarity=0.511 Sum_probs=23.3
Q ss_pred cEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 49 AVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 49 ~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+++|..|.+++||++.| |++||+|++|
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~i 31 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXV 31 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEE
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEE
Confidence 46788999999999976 9999999985
No 185
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=96.70 E-value=0.0042 Score=45.32 Aligned_cols=28 Identities=11% Similarity=0.236 Sum_probs=26.0
Q ss_pred CcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 48 MAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 48 ~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++|..|.+++||++.| |++||+|++|
T Consensus 363 ~gv~V~~V~~~spA~~aG-L~~GD~I~~v 390 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAG-LQKDDVIIGV 390 (436)
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEE
Confidence 489999999999999987 9999999986
No 186
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=96.66 E-value=0.0014 Score=50.09 Aligned_cols=39 Identities=21% Similarity=0.327 Sum_probs=32.8
Q ss_pred CcccEEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 33 TGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 33 ~gLG~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+||+.+... ..+++|..|.+++||++.| |++||+|++|
T Consensus 485 ~~lG~~~~~~----~~gv~V~~V~~~spA~~AG-L~~GD~I~aI 523 (597)
T 4fgm_A 485 VNFGAKYKAS----PQGLDVLNVYHDESAYHAG-LSAGDKIIAI 523 (597)
T ss_dssp CCCSEEEEEE----TTEEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred cccceEEecc----CCeEEEEEeCCCChHHHCC-CCCCCEEEEE
Confidence 4788887643 2479999999999999976 9999999986
No 187
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=96.51 E-value=0.0018 Score=45.19 Aligned_cols=29 Identities=24% Similarity=0.539 Sum_probs=26.1
Q ss_pred CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 47 KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 47 ~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+++|..|.|++||++.| |++||.|++|
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~i 271 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISV 271 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEE
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEE
Confidence 3689999999999999976 9999999985
No 188
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=96.48 E-value=0.0019 Score=47.21 Aligned_cols=28 Identities=29% Similarity=0.516 Sum_probs=26.1
Q ss_pred CcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 48 MAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 48 ~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++|..|.+++||++.| |++||+|++|
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~v 290 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSL 290 (436)
T ss_pred cceEEEEECCCChHHHCC-CCCCCEEEEE
Confidence 589999999999999987 9999999986
No 189
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=96.45 E-value=0.00097 Score=38.36 Aligned_cols=28 Identities=14% Similarity=0.069 Sum_probs=24.0
Q ss_pred CcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 48 MAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 48 ~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.++.|..+.|+++|++.| |++||.|++|
T Consensus 19 ~G~~V~~~~~~s~A~~aG-l~~GD~I~~i 46 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIG-LQDGDMAVAL 46 (87)
T ss_dssp EEEEEEECSCHHHHHHTT-CCTTCEEEEE
T ss_pred EEEEEEeCCCCCHHHHCC-CCCCCEEEEE
Confidence 467788889988999976 9999999985
No 190
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=96.39 E-value=0.0017 Score=46.18 Aligned_cols=28 Identities=29% Similarity=0.516 Sum_probs=25.7
Q ss_pred CcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 48 MAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 48 ~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++|..|.+++||++.| |++||.|++|
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GDvI~~i 290 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSL 290 (345)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEECEE
T ss_pred ceEEEEEeccCChHHHcC-CCCCCEEEEE
Confidence 588999999999999976 9999999975
No 191
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=96.35 E-value=0.0022 Score=44.95 Aligned_cols=28 Identities=25% Similarity=0.398 Sum_probs=25.8
Q ss_pred CcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 48 MAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 48 ~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++|..|.+++||++.| |++||.|++|
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~i 283 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAI 283 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEE
Confidence 589999999999999976 9999999985
No 192
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=96.24 E-value=0.0024 Score=46.99 Aligned_cols=28 Identities=29% Similarity=0.504 Sum_probs=26.2
Q ss_pred CcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 48 MAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 48 ~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++|..|.|++||++.| |++||+|++|
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~v 309 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQI 309 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEE
Confidence 689999999999999988 9999999985
No 193
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=96.20 E-value=0.0025 Score=46.88 Aligned_cols=28 Identities=21% Similarity=0.420 Sum_probs=26.0
Q ss_pred CcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 48 MAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 48 ~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++|..|.+++||++.| |++||.|++|
T Consensus 386 ~Gv~V~~V~~gspA~~aG-L~~GD~I~~V 413 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAG-IRPGDIIISA 413 (451)
T ss_dssp EEEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 478999999999999988 9999999986
No 194
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=95.76 E-value=0.0075 Score=42.62 Aligned_cols=28 Identities=36% Similarity=0.560 Sum_probs=25.3
Q ss_pred CcEEEEEeCCCChhcccCCCCC-----------CCEEEEC
Q psy18106 48 MAVFVCGLNPSGSASKTGSVLV-----------GDELLEI 76 (76)
Q Consensus 48 ~~I~V~~V~~gg~A~~dG~L~~-----------GD~ileV 76 (76)
.+++|..|.+++||++.| |++ ||.|++|
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~i 289 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSV 289 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEE
Confidence 589999999999999977 888 9999875
No 195
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=95.66 E-value=0.0049 Score=36.55 Aligned_cols=27 Identities=15% Similarity=0.037 Sum_probs=22.4
Q ss_pred cEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 49 AVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 49 ~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
+++|..+.|+++|++.| |++||.|++|
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~i 64 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVAL 64 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEE
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEE
Confidence 56677888888889876 9999999985
No 196
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=95.59 E-value=0.0021 Score=45.11 Aligned_cols=28 Identities=18% Similarity=0.363 Sum_probs=0.0
Q ss_pred CcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 48 MAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 48 ~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++|..|.+++||++.| |++||.|++|
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~i 281 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISI 281 (332)
T ss_dssp -----------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEE
Confidence 579999999999999976 9999999976
No 197
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=95.26 E-value=0.0057 Score=44.92 Aligned_cols=28 Identities=32% Similarity=0.563 Sum_probs=25.4
Q ss_pred CcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 48 MAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 48 ~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++|..|.+++||++.| |++||.|++|
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~i 313 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSL 313 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBS
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEE
Confidence 489999999999999965 9999999976
No 198
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=94.46 E-value=0.041 Score=42.89 Aligned_cols=40 Identities=13% Similarity=0.048 Sum_probs=32.7
Q ss_pred CCcccEEEecCCCCCCCcEEEEEeCCC--------ChhcccC-CCCCCCEEEEC
Q psy18106 32 HTGLGISLAGHKDRTKMAVFVCGLNPS--------GSASKTG-SVLVGDELLEI 76 (76)
Q Consensus 32 ~~gLG~si~Gg~~~~~~~I~V~~V~~g--------g~A~~dG-~L~~GD~ileV 76 (76)
..|+|+.+.- + +..++|..|.++ +||++.| .|+ ||+|++|
T Consensus 736 ~~g~G~~~~~--~--~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i 784 (1045)
T 1k32_A 736 SGRIACDFKL--D--GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDI 784 (1045)
T ss_dssp CCBCSEEEEE--E--TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEE
T ss_pred cceecEEEEE--e--CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEE
Confidence 4588988763 1 357999999998 9999988 499 9999986
No 199
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=94.43 E-value=0.031 Score=42.43 Aligned_cols=28 Identities=29% Similarity=0.419 Sum_probs=25.0
Q ss_pred CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 47 KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 47 ~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+++|..|.|++||++ + |++||.|++|
T Consensus 276 ~~Gv~V~~V~~~spA~~-a-l~~GDvI~~i 303 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASK-V-LKEGDVIVSF 303 (539)
T ss_dssp SBCEEEEEECTTSGGGG-T-CCTTCEEEEE
T ss_pred cCceeeecccCCChHHh-C-ccCCCEEEEE
Confidence 35899999999999987 5 9999999975
No 200
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=94.08 E-value=0.0091 Score=43.87 Aligned_cols=29 Identities=21% Similarity=0.350 Sum_probs=0.0
Q ss_pred CCcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 47 KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 47 ~~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
..+++|..|.++++|++.| |++||.|++|
T Consensus 382 ~~gv~V~~V~~gspA~~aG-L~~GDiI~~v 410 (448)
T 1ky9_A 382 DQGVVVNNVKTGTPAAQIG-LKKGDVIIGA 410 (448)
T ss_dssp ------------------------------
T ss_pred CCeEEEEEecCCCHHHHcC-CCCCCEEEEE
Confidence 3578999999999999977 9999999986
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=69.99 E-value=3.1 Score=31.50 Aligned_cols=28 Identities=7% Similarity=0.056 Sum_probs=24.4
Q ss_pred CcEEEEEeCCCChhcccCCCCCCCEEEEC
Q psy18106 48 MAVFVCGLNPSGSASKTGSVLVGDELLEI 76 (76)
Q Consensus 48 ~~I~V~~V~~gg~A~~dG~L~~GD~ileV 76 (76)
.+++|+.|.|+++|+.-+ ++.||.|++|
T Consensus 415 ~gVvvs~V~~~s~a~~~g-~~~gdiI~~v 442 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYE-DMNNQQVLKF 442 (539)
T ss_dssp CCEEEEEECCCGGGTTCS-SCCSEEEEEE
T ss_pred eEEEEEEecCCchhhhcC-CCCCCEEEeE
Confidence 479999999999998854 8899999986
No 202
>3jxo_A TRKA-N domain protein; TRKA K+ channel component, structural genomics, PSI-2-2, Pro structure initiative, joint center for structural genomics; 1.55A {Thermotoga SP}
Probab=55.60 E-value=15 Score=19.93 Aligned_cols=27 Identities=19% Similarity=0.351 Sum_probs=17.0
Q ss_pred cEEEEEeCCCCh---hcccCCCCCCCEEEE
Q psy18106 49 AVFVCGLNPSGS---ASKTGSVLVGDELLE 75 (76)
Q Consensus 49 ~I~V~~V~~gg~---A~~dG~L~~GD~ile 75 (76)
++.|..|..++. ..-+-.|++||.|+-
T Consensus 40 ~~~i~~I~R~~~~~~p~~~~~l~~GD~l~v 69 (86)
T 3jxo_A 40 DSIIAAIVRGGVLVVPRGDTEILSGDKLYV 69 (86)
T ss_dssp SEEEEEEEETTEEECCCTTCBCCTTCEEEE
T ss_pred CCEEEEEEECCEEECCCCCCEECCCCEEEE
Confidence 556655554431 234578999999873
No 203
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=52.71 E-value=28 Score=20.78 Aligned_cols=54 Identities=20% Similarity=0.209 Sum_probs=29.9
Q ss_pred hhhhcCCCCCcEEEEEEecCCCccc-EEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEE
Q psy18106 12 VKKKYGSLGPDLVVVTLERSHTGLG-ISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELL 74 (76)
Q Consensus 12 ~~~~~~~~~~e~~~v~L~k~~~gLG-~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~il 74 (76)
+.+.-+-++.|...|-=.-++..|- ..|.|-+.+ .- |.-+|+|++ ..++||.|+
T Consensus 8 Ll~aa~i~~~E~V~IvNvnNG~Rf~TYvI~GerGS--G~-----I~lNGAAAr--l~~~GD~vI 62 (96)
T 1vc3_B 8 LLDAAGILPFEQVDIYDITNGARLTTYALPGERGS--GV-----IGINGAAAH--LVKPGDLVI 62 (96)
T ss_dssp HHHHHTCCTTCEEEEEETTTCCEEEEECEEECTTT--TC-----EEEEGGGGG--TCCTTCEEE
T ss_pred HHHHcCCCCCCEEEEEECCCCceEEEEEEEccCCC--Ce-----EEEchHHHc--cCCCCCEEE
Confidence 4455556666654443222233442 236665542 11 455788887 578999986
No 204
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=52.69 E-value=42 Score=21.38 Aligned_cols=54 Identities=15% Similarity=0.209 Sum_probs=30.8
Q ss_pred hhhhcCCCCCcEEEEEEecCCCccc-EEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEE
Q psy18106 12 VKKKYGSLGPDLVVVTLERSHTGLG-ISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELL 74 (76)
Q Consensus 12 ~~~~~~~~~~e~~~v~L~k~~~gLG-~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~il 74 (76)
+.+.-+-++.|...|-=.-++..|- ..|.|-+++ + .|.-+|+|++ ..++||.|+
T Consensus 49 LldaAgIl~~EkV~IvNvnNG~RfeTYvI~GerGS---G----~I~lNGAAAr--l~~~GD~VI 103 (143)
T 1pqh_A 49 FLDAAGILENEAIDIWNVTNGKRFSTYAIAAERGS---R----IISVNGAAAH--CASVGDIVI 103 (143)
T ss_dssp HHHHHTCCTTCEEEEEETTTCCEEEEEEEEECTTC---C----CEECCGGGGG--TCCTTCEEE
T ss_pred HHHHcCCCCCCEEEEEECCCCceEEEEEEEccCCC---c----eEEechHHHc--cCCCCCEEE
Confidence 4445555666654443322234443 236665442 1 1667889987 578999986
No 205
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=47.77 E-value=46 Score=20.41 Aligned_cols=54 Identities=19% Similarity=0.295 Sum_probs=28.9
Q ss_pred hhhhcCCCCCcEEEEEEecCCCccc-EEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEE
Q psy18106 12 VKKKYGSLGPDLVVVTLERSHTGLG-ISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELL 74 (76)
Q Consensus 12 ~~~~~~~~~~e~~~v~L~k~~~gLG-~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~il 74 (76)
+.+.-+-++.|...|-=.-++..|- ..|.|-+++ .- |.-+|+|++ ..++||+|+
T Consensus 35 Ll~aA~i~~~E~V~I~NvnNG~Rf~TYvI~GerGS--g~-----I~lNGAAAr--~~~~GD~vI 89 (114)
T 3oug_A 35 IMKQANIIENEKVQVVNLNNGERLETYVIKGEPNS--KT-----IALNGPAAR--RCEIGDQLF 89 (114)
T ss_dssp HHHHTTCCTTBEEEEEETTTCCEEEEEEEEECTTS--CC-----EEEEGGGGG--GCCTTCEEE
T ss_pred HHHHcCCCcCCEEEEEECCCCceEEEEEEEccCCC--CE-----EEeCCHHHh--ccCCCCEEE
Confidence 3444455666654443222233442 235555442 11 455788887 478999986
No 206
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=47.22 E-value=19 Score=19.80 Aligned_cols=31 Identities=6% Similarity=0.277 Sum_probs=23.8
Q ss_pred CchhhhhhhcCCCCCcEEEEEEecCCCcccEE
Q psy18106 7 FSSDKVKKKYGSLGPDLVVVTLERSHTGLGIS 38 (76)
Q Consensus 7 ~~~~~~~~~~~~~~~e~~~v~L~k~~~gLG~s 38 (76)
.|++.+++-|... +++..+.+.+.++|+||-
T Consensus 23 ~te~~L~~~F~~~-G~i~~v~i~~~srGfaFV 53 (89)
T 3d2w_A 23 MTAEELQQFFCQY-GEVVDVFIPKPFRAFAFV 53 (89)
T ss_dssp CCHHHHHHHHTTT-SCEEEEECCSSCCSEEEE
T ss_pred CCHHHHHHHHhcc-CCEEEEEEeeCCCCEEEE
Confidence 5777888777665 568889998877788875
No 207
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=46.69 E-value=36 Score=20.34 Aligned_cols=53 Identities=19% Similarity=0.206 Sum_probs=29.5
Q ss_pred hhhhcCCCCCcEEEEEEecCCCccc-EEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEE
Q psy18106 12 VKKKYGSLGPDLVVVTLERSHTGLG-ISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELL 74 (76)
Q Consensus 12 ~~~~~~~~~~e~~~v~L~k~~~gLG-~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~il 74 (76)
+.+.-+-++.|...|-=.-++..|- ..|.|-+ + .. |.-+|+|++ ..++||.|+
T Consensus 7 LldaA~il~~E~V~IvNvnNG~RfeTYvI~Ger-S-G~------I~lNGAAAr--l~~~GD~vI 60 (97)
T 1uhe_A 7 LAKLAKLREGMKVEIVDVNNGERFSTYVILGKK-R-GE------ICVNGAAAR--KVAIGDVVI 60 (97)
T ss_dssp HHHHTTCCTTCEEEEEETTTCCEEEEECEEECS-T-TC------EEEEGGGGG--GCCTTCEEE
T ss_pred HHHhcCCCCCCEEEEEECCCCceEEEEEEeecc-C-Ce------EEEchHHHc--cCCCCCEEE
Confidence 4455556666654443222233442 2355554 2 11 556788887 478999986
No 208
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=46.05 E-value=6.1 Score=23.96 Aligned_cols=53 Identities=19% Similarity=0.250 Sum_probs=29.1
Q ss_pred hhhhcCCCCCcEEEEEEecCCCcccE-EEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEE
Q psy18106 12 VKKKYGSLGPDLVVVTLERSHTGLGI-SLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELL 74 (76)
Q Consensus 12 ~~~~~~~~~~e~~~v~L~k~~~gLG~-si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~il 74 (76)
+.+.-+-++.|...|-=.-++..|-= .|.|- .+ .- |.-+|+|++ ..++||.|+
T Consensus 8 Ll~aA~i~~~E~V~I~NvnNG~Rf~TYvI~Ge-GS--G~-----I~lNGAAAr--l~~~GD~vI 61 (102)
T 3plx_B 8 LLQASGILEYEKVQVVNVNNGARFETYTIATQ-EE--GV-----VCLNGAAAR--LAEVGDKVI 61 (102)
T ss_dssp HHHHHTCCTTCEEEEEETTTCCEEEEECEEES-ST--TC-----EEEEGGGGG--GCCTTCEEE
T ss_pred HHHHcCCCCCCEEEEEECCCCcEEEEEEEEcC-CC--CE-----EEeCcHHHh--ccCCCCEEE
Confidence 44555566666544432222334432 25553 32 11 556788887 478999986
No 209
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=35.41 E-value=58 Score=20.64 Aligned_cols=54 Identities=17% Similarity=0.201 Sum_probs=28.5
Q ss_pred hhhhcCCCCCcEEEEEEecCCCccc-EEEecCCCCCCCcEEEEEeCCCChhcccCCCCCCCEEE
Q psy18106 12 VKKKYGSLGPDLVVVTLERSHTGLG-ISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELL 74 (76)
Q Consensus 12 ~~~~~~~~~~e~~~v~L~k~~~gLG-~si~Gg~~~~~~~I~V~~V~~gg~A~~dG~L~~GD~il 74 (76)
+.+.-+-++.|...|-=.-++..|- ..|.|-+.+ .- |.-+|+|++ ..++||.|+
T Consensus 32 LldaAgIl~~EkV~IvNvnNG~RfeTYvI~GerGS--G~-----I~lNGAAAr--l~~~GD~vI 86 (139)
T 2c45_A 32 LMDAADLLEGEQVTIVDIDNGARLVTYAITGERGS--GV-----IGINGAAAH--LVHPGDLVI 86 (139)
T ss_dssp HHHHTTCCSSCCEEEEETTTCCEEEECEEEECTTT--TC-----EEEESSTTT--TSCTTCEEE
T ss_pred HHHHcCCCCCCEEEEEECCCCceEEEEEEEccCCC--CE-----EEEchHHHc--cCCCCCEEE
Confidence 3444455565544333222233332 236665442 11 455788886 578999986
No 210
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.46 E-value=63 Score=18.43 Aligned_cols=32 Identities=13% Similarity=0.285 Sum_probs=22.6
Q ss_pred CCchhhhhhhcCCCCCcEEEEEEecCCCcccEE
Q psy18106 6 NFSSDKVKKKYGSLGPDLVVVTLERSHTGLGIS 38 (76)
Q Consensus 6 ~~~~~~~~~~~~~~~~e~~~v~L~k~~~gLG~s 38 (76)
+.|++.|++-|... +++..|.+.+...|++|-
T Consensus 28 ~~te~~L~~~F~~~-G~V~~v~i~~~~rGfaFV 59 (100)
T 2d9o_A 28 GYSKDVLLRLLQKY-GEVLNLVLSSKKPGTAVV 59 (100)
T ss_dssp SCCHHHHHHHHHTT-SCEEEEEEESSSSSEEEE
T ss_pred CCCHHHHHHHHHhc-CCEEEEEEccCCCCEEEE
Confidence 36777777766555 468888887666788764
No 211
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.12 E-value=40 Score=17.94 Aligned_cols=31 Identities=10% Similarity=0.326 Sum_probs=22.0
Q ss_pred CchhhhhhhcCCCCCcEEEEEEecCCCcccEE
Q psy18106 7 FSSDKVKKKYGSLGPDLVVVTLERSHTGLGIS 38 (76)
Q Consensus 7 ~~~~~~~~~~~~~~~e~~~v~L~k~~~gLG~s 38 (76)
.|.+.+.+-|... +++..+.+.+...|++|-
T Consensus 17 ~te~~l~~~F~~~-G~i~~v~i~~~~~g~afV 47 (88)
T 1wf0_A 17 MTEDELREFFSQY-GDVMDVFIPKPFRAFAFV 47 (88)
T ss_dssp SCHHHHHHHSTTT-SCCCEEECCSSCCSCCEE
T ss_pred CCHHHHHHHHHHc-CCeeEEEEecCCCCEEEE
Confidence 5777887777665 457778887766777764
No 212
>2yxz_A Thiamin-monophosphate kinase; alpha/beta structure, transferase; 1.90A {Thermus thermophilus}
Probab=27.46 E-value=35 Score=23.08 Aligned_cols=40 Identities=25% Similarity=0.293 Sum_probs=20.7
Q ss_pred cccEEEecCCCCCCCcEEE--EEeCCCChhcccCCCCCCCEEE
Q psy18106 34 GLGISLAGHKDRTKMAVFV--CGLNPSGSASKTGSVLVGDELL 74 (76)
Q Consensus 34 gLG~si~Gg~~~~~~~I~V--~~V~~gg~A~~dG~L~~GD~il 74 (76)
-+|+.|.||......+++| ..+.+....-. ...++||.|+
T Consensus 114 ~~g~~lvGG~t~~~~~~~i~~tG~v~~~~~~~-~~a~~GD~i~ 155 (311)
T 2yxz_A 114 RLGAFLLGGDTNRGVEVALTVSGYALAEAPLP-RKALPGDLLY 155 (311)
T ss_dssp HTTCEEEEEEEEECSSCEEEEEEEEEESSCCC-SCCCTTCEEE
T ss_pred HcCCeEEceecCCCCCcEEEEEeeeCCCCccc-cCCCCCCEEE
Confidence 4677888887532122333 23332222222 3478999886
No 213
>1vct_A Hypothetical protein PH0236; helix rich, structural genomics, riken structural genomics/P initiative, RSGI, NPPSFA; 1.85A {Pyrococcus horikoshii} SCOP: a.7.12.1 d.286.1.1 PDB: 2bkn_A 2bko_A 2bkp_A
Probab=27.40 E-value=37 Score=21.83 Aligned_cols=27 Identities=15% Similarity=0.311 Sum_probs=18.4
Q ss_pred cEEEEEeCCCC----hhcccCCCCCCCEEEE
Q psy18106 49 AVFVCGLNPSG----SASKTGSVLVGDELLE 75 (76)
Q Consensus 49 ~I~V~~V~~gg----~A~~dG~L~~GD~ile 75 (76)
++.|..|..++ ...-+-.|++||.|+-
T Consensus 149 gv~IvaI~R~g~~i~~P~~dt~L~~GD~Liv 179 (205)
T 1vct_A 149 GVWIIAVRRGKRWIFGPNENFKIRAGDVLIG 179 (205)
T ss_dssp SCEEEEEEETTEEEESCCTTCBCCTTCEEEE
T ss_pred CEEEEEEEECCEEEeCCCCCCEECCCCEEEE
Confidence 56666666555 2345678999999874
No 214
>3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus}
Probab=26.24 E-value=34 Score=23.40 Aligned_cols=42 Identities=19% Similarity=0.355 Sum_probs=24.3
Q ss_pred cccEEEecCCCC---CCCcEEEEEeCCCChhcccCCCCCCCEEEE
Q psy18106 34 GLGISLAGHKDR---TKMAVFVCGLNPSGSASKTGSVLVGDELLE 75 (76)
Q Consensus 34 gLG~si~Gg~~~---~~~~I~V~~V~~gg~A~~dG~L~~GD~ile 75 (76)
-+|+.|.||... ....+.+..+.+...+-.....++||.|+-
T Consensus 110 ~~g~~lvGGdt~~~~~~i~~t~iG~v~~~~~~~~~~a~~GD~ii~ 154 (319)
T 3mcq_A 110 QFDIALIGGDTTRGPLTISVQIMGETPPGASLLRSTARADDDIWV 154 (319)
T ss_dssp HTTCEEEEEEEEESSCEEEEEEEEEECTTCCCCSSCCCTTEEEEE
T ss_pred HcCCeEEeeEcCCCCeEEEEEEEEeeCCCcccccCCCCCCCEEEE
Confidence 456777777542 223455555555443333356899999863
No 215
>1fm0_E Molybdopterin convertin factor, subunit 2; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.41.5.1 PDB: 1fma_E 1nvi_E 3bii_E 1nvj_A
Probab=22.92 E-value=19 Score=22.75 Aligned_cols=17 Identities=24% Similarity=0.489 Sum_probs=13.6
Q ss_pred hhcccCCCCCCCEEEEC
Q psy18106 60 SASKTGSVLVGDELLEI 76 (76)
Q Consensus 60 ~A~~dG~L~~GD~ileV 76 (76)
..|+-|+|.+||.++-|
T Consensus 81 v~HR~G~l~vGe~~v~V 97 (150)
T 1fm0_E 81 VIHRIGELWPGDEIVFV 97 (150)
T ss_dssp EEEECEEECTTCEEEEE
T ss_pred EEEEEcccCCCCEEEEE
Confidence 44788999999998754
No 216
>2q5w_E Molybdopterin-converting factor subunit 2; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_A*
Probab=22.89 E-value=19 Score=22.75 Aligned_cols=17 Identities=18% Similarity=0.290 Sum_probs=13.4
Q ss_pred hhcccCCCCCCCEEEEC
Q psy18106 60 SASKTGSVLVGDELLEI 76 (76)
Q Consensus 60 ~A~~dG~L~~GD~ileV 76 (76)
..|+-|+|.+||.++-|
T Consensus 79 v~HR~G~l~vGe~~v~V 95 (149)
T 2q5w_E 79 IVHRIGPLQISDIAVLI 95 (149)
T ss_dssp EEEECEEECTTCEEEEE
T ss_pred EEEEEcccCCCCeEEEE
Confidence 34777999999998753
No 217
>2yyd_A Selenide, water dikinase; FULL-length selenophosphate synthetase, structural genomics, NPPSFA; 1.98A {Aquifex aeolicus} PDB: 2yye_A* 2zod_A 2zau_A
Probab=22.62 E-value=42 Score=23.35 Aligned_cols=42 Identities=24% Similarity=0.314 Sum_probs=23.7
Q ss_pred cccEEEecCCCC----CCCcEEEEEeCCCChhcccCCCCCCCEEEE
Q psy18106 34 GLGISLAGHKDR----TKMAVFVCGLNPSGSASKTGSVLVGDELLE 75 (76)
Q Consensus 34 gLG~si~Gg~~~----~~~~I~V~~V~~gg~A~~dG~L~~GD~ile 75 (76)
-+|+.|.||... ....+.+..+.+....-.....++||.|+-
T Consensus 132 ~~gv~lvGGdt~~~~~~~i~~t~vG~v~~~~~~~~~~a~~GD~Iiv 177 (345)
T 2yyd_A 132 EAKTVLLGGHTIDDKEPKFGLSVAGICPEGKYITQSGAQVGQLLIL 177 (345)
T ss_dssp HTTCEEEEEEEEECSSCEEEEEEEEECGGGCCCCSSCCCTTCEEEE
T ss_pred HcCCEEEeeEcccCCCceEEEEEEEEEcCCceecCCCCCCCCEEEE
Confidence 456777777641 123444555554433333355899999873
No 218
>2wp4_A Molybdopterin-converting factor subunit 2 1; transferase; 2.49A {Mycobacterium tuberculosis}
Probab=22.24 E-value=20 Score=22.60 Aligned_cols=16 Identities=38% Similarity=0.657 Sum_probs=13.0
Q ss_pred hcccCCCCCCCEEEEC
Q psy18106 61 ASKTGSVLVGDELLEI 76 (76)
Q Consensus 61 A~~dG~L~~GD~ileV 76 (76)
.|+-|+|.+||.++-|
T Consensus 88 ~HR~G~l~vGe~~v~V 103 (147)
T 2wp4_A 88 AHRTGELQIGDAAVVI 103 (147)
T ss_dssp EEECEEECTTCEEEEE
T ss_pred EEEEcccCCCCeEEEE
Confidence 4778999999998753
No 219
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=21.25 E-value=16 Score=23.94 Aligned_cols=19 Identities=11% Similarity=0.115 Sum_probs=16.4
Q ss_pred CCCChhcccCCCCCCCEEE
Q psy18106 56 NPSGSASKTGSVLVGDELL 74 (76)
Q Consensus 56 ~~gg~A~~dG~L~~GD~il 74 (76)
.++-+|+..|.|++||-|+
T Consensus 57 ~~g~aad~tg~l~vgDAI~ 75 (178)
T 2adz_A 57 LNGAAEPGAAPPQLPEALL 75 (178)
T ss_dssp CCCCCCSCCSSCCCCSSTT
T ss_pred CCCCcccccCCCCcchHHH
Confidence 6677889999999999876
Done!