RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy18106
(76 letters)
>d1ufxa_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 48.8 bits (116), Expect = 7e-10
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 17 GSLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
GS G +V +++S LGI++ G + + + + GSA G + VG +LE+
Sbjct: 1 GSSGSSGTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEV 60
>d1ueqa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 123
Score = 46.1 bits (109), Expect = 9e-09
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 8 SSDKVKKKYGSLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSV 67
SS + L + TL++S+ G G ++ G + + V + P G A++ G +
Sbjct: 5 SSGLFTRDASQLKGTFLSTTLKKSNMGFGFTIIGGDE-PDEFLQVKSVIPDGPAAQDGKM 63
Query: 68 LVGDELLEI 76
GD ++ I
Sbjct: 64 ETGDVIVYI 72
>d2fnea1 b.36.1.1 (A:1955-2042) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 88
Score = 44.8 bits (106), Expect = 1e-08
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 21 PDLVVVTLERSHTGLGISLAGHKD--RTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
P +TLER GLG S+ G + ++V + G+AS+ G + GD+++ +
Sbjct: 1 PQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAV 58
>d1wi4a1 b.36.1.1 (A:8-103) Syntaxin binding protein 4 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 96
Score = 44.9 bits (106), Expect = 2e-08
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 21 PDLVVVTLERSHTGLGISLAGHKDRTKMA-VFVCGLNPSGSASKTGSVLVGDELLEI 76
P V+T+ + TGLG+ + G +R + V++ + P G K G + GD+L+ I
Sbjct: 7 PAFRVITVTKE-TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSI 62
>d1n7ea_ b.36.1.1 (A:) Glutamate receptor-interacting protein 1,
GRIP1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 95
Score = 44.9 bits (106), Expect = 2e-08
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 20 GPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
G + V L+R LGI+++G ++ + + L G A +TG++ +GD +L I
Sbjct: 1 GAIIYTVELKRYGGPLGITISGTEEPF-DPIIISSLTKGGLAERTGAIHIGDRILAI 56
>d1wf8a1 b.36.1.1 (A:8-101) Neurabin-i {Human (Homo sapiens)
[TaxId: 9606]}
Length = 94
Score = 44.1 bits (104), Expect = 3e-08
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 22 DLVVVTLERSHTGLGISLAG-----HKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+L V LE+ GLGIS+ G K+ +FV + G+A + G + V D+++E+
Sbjct: 2 ELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEV 61
>d1v6ba_ b.36.1.1 (A:) Harmonin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 118
Score = 43.5 bits (102), Expect = 8e-08
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 18 SLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+ V + + L ++L G D V V + G+A + G V+ GDE++ I
Sbjct: 13 QIAGKDVRLLRIKKEGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAI 71
>d1uepa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 42.6 bits (100), Expect = 1e-07
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 17 GSLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
GS G + V L R +G G + G + + + + GSA + G + GDEL+ +
Sbjct: 4 GSSGYKELDVHLRRMESGFGFRILGGDE-PGQPILIGAVIAMGSADRDGRLHPGDELVYV 62
>d1g9oa_ b.36.1.1 (A:) Na+/H+ exchanger regulatory factor, NHERF
{Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 42.1 bits (99), Expect = 1e-07
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 25 VVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+ LE+ G G L G K K+ ++ + P A K G +L GD L+E+
Sbjct: 6 LCCLEKGPNGYGFHLHGEKG--KLGQYIRLVEPGSPAEKAG-LLAGDRLVEV 54
>d1x6da1 b.36.1.2 (A:8-114) Interleukin 16 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 107
Score = 41.9 bits (98), Expect = 3e-07
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 22 DLVVVTLER-SHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+ V L + GLG SLAG D + V + P+G AS+ G++ G+E+L I
Sbjct: 8 GIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSI 63
>d1t2ma1 b.36.1.1 (A:2-93) Afadin {Human (Homo sapiens) [TaxId:
9606]}
Length = 92
Score = 41.4 bits (97), Expect = 4e-07
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 21 PDLVVVTLERSHTGLGISLAGHKD--RTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
P+++ VTL++ + G+G+S+ K + K+ ++V + G+A G + GD+LL +
Sbjct: 3 PEIITVTLKKQN-GMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSV 59
>d1wfva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 41.4 bits (97), Expect = 4e-07
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 22 DLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
D V +E+ G G S+ G ++ KM ++V L G A + G + VGD+++EI
Sbjct: 11 DYFTVDMEKGAKGFGFSIRGGRE-YKMDLYVLRLAEDGPAIRNGRMRVGDQIIEI 64
>d1rgra_ b.36.1.1 (A:) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 93
Score = 40.7 bits (95), Expect = 6e-07
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 26 VTLERSHTGLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+TLER ++GLG S+AG D ++F+ + P G+A++ G + V D +L +
Sbjct: 5 ITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFV 59
>d2fe5a1 b.36.1.1 (A:223-314) Synapse-associated protein 102
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 40.3 bits (94), Expect = 1e-06
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 23 LVVVTLERSHTGLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
++ V L + GLG S+AG ++++ + G+A K G + +GD LL +
Sbjct: 2 IMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAV 59
>d1tp5a1 b.36.1.1 (A:302-403) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 102
Score = 39.5 bits (92), Expect = 2e-06
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 25 VVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+ + R TGLG ++ G +D +F+ + G A +G + GD++L +
Sbjct: 12 RIVIHRGSTGLGFNIVGGED--GEGIFISFILAGGPADLSGELRKGDQILSV 61
>d1x5ra1 b.36.1.1 (A:8-106) Glutamate receptor interacting protein
2, GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId:
9606]}
Length = 99
Score = 38.7 bits (90), Expect = 4e-06
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 26 VTLER-SHTGLGISLAGHKDRTK---MAVFVCGLNPSGSASKTGSVLVGDELLEI 76
V L +G G+ L G T+ VC + P A + G + VGD +L I
Sbjct: 12 VVLCGDPLSGFGLQLQGGIFATETLSSPPLVCFIEPDSPAERCGLLQVGDRVLSI 66
>d1wifa_ b.36.1.1 (A:) hypothetical PDZ domain containing protein
Uqcrc2 (4930408O21Rik) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 126
Score = 38.9 bits (90), Expect = 5e-06
Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 18 SLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
S ++ L + GLG+ + + + + L G+A+ G + GD L+ +
Sbjct: 23 SSLNKVIQTKLTVGNLGLGLVVIQNGP----YLQISHLINKGAAASDGILQPGDVLISV 77
>d1wh1a_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 124
Score = 38.8 bits (90), Expect = 6e-06
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 8 SSDKVKKKYGSLGPDLVVVTLER--SHTGLGISLAGHKD-RTKMAVFVCGLNPSGSASKT 64
SS + ++ +L V L R S LG+++ D + +++ ++P+ A+K
Sbjct: 5 SSGDIHQEMDREELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKD 64
Query: 65 GSVLVGDELLEI 76
G + GD +++I
Sbjct: 65 GRIREGDRIIQI 76
>d1qava_ b.36.1.1 (A:) Syntrophin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 90
Score = 37.9 bits (88), Expect = 8e-06
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 26 VTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
VT+ ++ GLGIS+ G ++ KM + + + +A +T ++ VGD +L +
Sbjct: 8 VTVRKADAGGLGISIKGGRE-NKMPILISKIFKGLAADQTEALFVGDAILSV 58
>d2fcfa1 b.36.1.1 (A:1148-1243) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 38.0 bits (88), Expect = 8e-06
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
Query: 25 VVTLERS-HTGLGISLAGHKD--------RTKMAVFVCGLNPSGSASKTGSVLVGDELLE 75
V L R LGIS+ G + +F+ + A K G++ GD ++E
Sbjct: 4 RVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVE 63
Query: 76 I 76
+
Sbjct: 64 V 64
>d1v62a_ b.36.1.1 (A:) Glutamate receptor interacting protein 2,
GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 38.5 bits (89), Expect = 9e-06
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 8 SSDKVKKKYGSLGPDLVVVTLERSH-TGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGS 66
S D V G L +V + ++ + LGISL R K + + + P+ ++G+
Sbjct: 6 SGDTVANASGPL-----MVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGA 60
Query: 67 VLVGDELLEI 76
+ GD +L I
Sbjct: 61 LHPGDHILSI 70
>d1um1a_ b.36.1.1 (A:) Hypothetical protein KIAA1849 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 37.6 bits (87), Expect = 1e-05
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 20 GPDLVVVTLERSHTGLGISLAGHKD--RTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+ V LER +GLG+ L +++ L P A+ G + +GD +LE+
Sbjct: 6 SGYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEV 64
>d1i16a_ b.36.1.2 (A:) Interleukin 16 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 130
Score = 37.7 bits (87), Expect = 1e-05
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 21 PDLVVVTLERSHTGLGISLAGHKDRTK--MAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+ VTLE+ GLG SL G K + + + ++ ++ +V GDE+L++
Sbjct: 28 ATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQL 85
>d1ihja_ b.36.1.1 (A:) Inad {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 94
Score = 37.2 bits (86), Expect = 2e-05
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 20 GPDLVVVTLERS-HTGLGISLAGHKDRT-----KMAVFVCGLNPSGSASKTGSVLVGDEL 73
G + +VTL+++ GI + + + +F+ G+ P A G + VGD +
Sbjct: 1 GELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRI 60
Query: 74 LEI 76
L +
Sbjct: 61 LSL 63
>d2cssa1 b.36.1.1 (A:8-115) Regulating synaptic membrane
exocytosis protein 1, RIMS1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 108
Score = 37.2 bits (86), Expect = 2e-05
Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 24 VVVTLERSHTGLGISLAGHKD--RTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+ S LG+ + G K ++ F+ + A G + GDE+LE
Sbjct: 21 RTTMPKDSGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEW 75
>d2f0aa1 b.36.1.1 (A:251-342) Segment polarity protein dishevelled
homolog Dvl-2 {African clawed frog (Xenopus laevis)
[TaxId: 8355]}
Length = 92
Score = 36.8 bits (85), Expect = 2e-05
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 23 LVVVTLER-SHTGLGISLAGHKD-RTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
++ VTL + LGIS+ G + R +++ + G+ + G + GD LL++
Sbjct: 2 IITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQV 57
>d1x5qa1 b.36.1.1 (A:8-104) Scribble (KIAA0147) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 36.8 bits (85), Expect = 2e-05
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 21 PDLVVVTLERSHTGLGISLAGHKDRT-----KMAVFVCGLNPSGSASKTGSVLVGDELLE 75
+ + +T+ R GLGIS+AG K T +F+ ++ G A++ V VGD+LLE
Sbjct: 7 EEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAAR-AGVRVGDKLLE 65
Query: 76 I 76
+
Sbjct: 66 V 66
>d1whaa_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 36.5 bits (84), Expect = 3e-05
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 25 VVTLERSHTGLGISLAGHKDRT-----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
V L RS GLG S+AG K T +FV + G+A + G++ VGD +L I
Sbjct: 10 VACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSI 66
>d1va8a1 b.36.1.1 (A:8-107) Maguk p55 subfamily member 5 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 100
Score = 35.7 bits (82), Expect = 6e-05
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 8 SSDKVKKKYGSLGPDLV-VVTLERS-HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTG 65
+ ++V + G G + V +V +E++ LG ++ D V + + G+A K+G
Sbjct: 3 TDERVYESIGHYGGETVKIVRIEKARDIPLGATVRNEMDS----VIISRIVKGGAAEKSG 58
Query: 66 SVLVGDELLEI 76
+ GDE+LEI
Sbjct: 59 LLHEGDEVLEI 69
>d1ozia_ b.36.1.1 (A:) Phosphatase hPTP1e {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 99
Score = 35.7 bits (82), Expect = 6e-05
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 21 PDLVVVTLERSHTGLGISLAGHKDR-------TKMAVFVCGLNPSGSASKTGSVLVGDEL 73
D V L ++ LGIS+ D+ ++V + P G+A G + GD +
Sbjct: 3 GDTFEVELAKTDGSLGISVTVLFDKGGVNTSVRHGGIYVKAIIPKGAAESDGRIHKGDRV 62
Query: 74 LEI 76
L +
Sbjct: 63 LAV 65
>d2f5ya1 b.36.1.1 (A:19-95) Regulator of G-protein signaling 3,
RGS3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 35.2 bits (81), Expect = 7e-05
Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Query: 26 VTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+T+ R G G ++ V V ++ G A + G + D +L++
Sbjct: 1 ITIPRGKDGFGFTICCDSP-----VRVQAVDSGGPAERAG-LQQLDTVLQL 45
>d1p1da2 b.36.1.1 (A:115-213) Glutamate receptor interacting
protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 99
Score = 35.3 bits (81), Expect = 8e-05
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 26 VTLER-SHTGLGISLAGHKDRT-KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
V L + LGI+++ R + + + A +TG++ +GD+LL I
Sbjct: 14 VKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAI 66
>d2csja1 b.36.1.1 (A:8-111) Tight junction protein ZO-2, Tjp2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 104
Score = 35.3 bits (81), Expect = 9e-05
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 22 DLVVVTLER-SHTGLGISLAG-----HKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLE 75
+ VTL++ S G GI+++G H + + ++ + + P G A G + D ++
Sbjct: 7 EQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD--GLLQENDRVVM 64
Query: 76 I 76
+
Sbjct: 65 V 65
>d1m5za_ b.36.1.1 (A:) Glutamate receptor interacting protein {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 91
Score = 34.9 bits (80), Expect = 9e-05
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 21 PDLVVVTLERS--HTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+L VTL + G S+A + V+V + P+G G + D LL++
Sbjct: 5 VELHKVTLYKDSGMEDFGFSVADGLL--EKGVYVKNIRPAGPGDL-GGLKPYDRLLQV 59
>d1kwaa_ b.36.1.1 (A:) Cask/Lin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 88
Score = 34.8 bits (80), Expect = 1e-04
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 25 VVTLERSH-TGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+V +++ +GI+L ++ V + G + G++ VGDE+ EI
Sbjct: 4 LVQFQKNTDEPMGITLKMNELN---HCIVARIMHGGMIHRQGTLHVGDEIREI 53
>d1uhpa_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 107
Score = 34.9 bits (80), Expect = 1e-04
Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 21 PDLVVVTLERSHTGLGISLAGHKDRT-------KMAVFVCGLNPSGSASKTGSVLVGDEL 73
+ + L R LG ++ G + +FV + SG A+K G + + D +
Sbjct: 7 GKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRI 66
Query: 74 LEI 76
+E+
Sbjct: 67 IEV 69
>d1x45a1 b.36.1.1 (A:8-92) Amyloid beta A4 precursor
protein-binding family A member 1 (APBA1, X11) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 34.4 bits (79), Expect = 2e-04
Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 26 VTLERSH-TGLGISLAGHKDRTKM-AVFVCGLNPSGSASKTGSVLVGDELLEI 76
V +E+ LG+ + + + V + + G A K+G + +GD+++ I
Sbjct: 2 VFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSI 54
>d1uita_ b.36.1.1 (A:) Discs large 5 protein KIAA0583 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 34.6 bits (79), Expect = 2e-04
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 8 SSDKVKKKYGSLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSV 67
SS ++K + V +++ LGIS+ + ++V + A + G +
Sbjct: 5 SSGGERRKDRPYVEEPRHVKVQKGSEPLGISIVSGEK---GGIYVSKVTVGSIAHQAG-L 60
Query: 68 LVGDELLEI 76
GD+LLE
Sbjct: 61 EYGDQLLEF 69
>d1v5qa_ b.36.1.1 (A:) Glutamate receptor interacting protein
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 122
Score = 34.6 bits (79), Expect = 2e-04
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 26 VTLER-SHTGLGISLAGHKDRTK---MAVFVCGLNPSGSASKTGSVLVGDELLEI 76
V L TG GI L G T+ + + A + G + +GD ++ I
Sbjct: 19 VVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAI 73
>d1qaua_ b.36.1.1 (A:) Neuronal nitric oxide synthase, NNOS {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 112
Score = 33.9 bits (77), Expect = 4e-04
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 22 DLVVVTL-ERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+++ V L +R GLG + K V + L G+A ++G + GD +L +
Sbjct: 1 NVISVRLFKRKVGGLGFLVKERVS--KPPVIISDLIRGGAAEQSGLIQAGDIILAV 54
>d1ujda_ b.36.1.1 (A:) Hypothetical protein KIAA0559 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 33.8 bits (77), Expect = 4e-04
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 34 GLGISLAGHKDRT----KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
GLGI + G K+ ++ ++ + P GSA +TG ++ G ++LE
Sbjct: 31 GLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEW 77
>d1wg6a_ b.36.1.1 (A:) Partitioning-defective 3-like protein,
PAR3-L (RIKEN cDNA 2810455b10) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 127
Score = 33.5 bits (76), Expect = 5e-04
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 25 VVTLERSHTGLGISLAGHKDRT---KMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
+ + GLG+SL G+K R + +F+ + G+A K G + + D+L+ +
Sbjct: 29 IPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAV 83
>d1ujua_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 111
Score = 33.1 bits (75), Expect = 7e-04
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 17 GSLGPDLVVVTLERSHT-GLGISLAG--------HKDRTKMAVFVCGLNPSGSASKTGSV 67
GS GP L + ++++ LGIS+ G +D T +F+ ++P+G+A + G +
Sbjct: 4 GSSGPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRL 63
Query: 68 LVGDELLEI 76
VG LLE+
Sbjct: 64 RVGLRLLEV 72
>d1ueza_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 32.9 bits (75), Expect = 8e-04
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 23 LVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
LV + ++H GLG S+ G + + ++V + P A K G + VGD++L +
Sbjct: 11 LVSLRRAKAHEGLGFSIRGGSE-HGVGIYVSLVEPGSLAEKEG-LRVGDQILRV 62
>d1ujva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 96
Score = 31.5 bits (71), Expect = 0.002
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 7/60 (11%)
Query: 17 GSLGPDLVVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
S +L+ +T+ + G G ++A ++ + GD ++EI
Sbjct: 5 SSGQAELMTLTIVKGAQGFGFTIADSPTGQRVK-------QILDIQGCPGLCEGDLIVEI 57
>d1x5na1 b.36.1.1 (A:8-108) Harmonin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 30.2 bits (68), Expect = 0.009
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 24 VVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
V ++L GLG S++ K +F+ + P +++ G +GD+++E+
Sbjct: 12 VFISLV-GSRGLGCSISSGPI-QKPGIFISHVKPGSLSAEVGLE-IGDQIVEV 61
>d1v5la_ b.36.1.1 (A:) Alpha-actinin-2 associated LIM protein
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 103
Score = 28.1 bits (62), Expect = 0.056
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 34 GLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
G L+G D + + + P GS + ++ GD +L I
Sbjct: 16 PWGFRLSGGID-FNQPLVITRITP-GSKAAAANLCPGDVILAI 56
>d1y7na1 b.36.1.1 (A:12-90) Amyloid beta A4 precursor
protein-binding family A member 1 (APBA1, X11) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 27.1 bits (60), Expect = 0.095
Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 9/53 (16%)
Query: 24 VVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
V++ LG S+ +C L G A + G V VG ++EI
Sbjct: 4 VLIRRPDLRYQLGFSVQNG--------IICSLMRGGIAERGG-VRVGHRIIEI 47
>d2z9ia1 b.36.1.4 (A:227-314) Protease PepD {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 88
Score = 26.8 bits (59), Expect = 0.11
Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 31 SHTGLGISLAGHKDRTKMAVFVCGLNPSGSASKTGSVLVGDELLEI 76
SH LG+ + KD + + G+A+ G V G + ++
Sbjct: 1 SHASLGVQVTNDKDTL--GAKIVEVVAGGAAANAG-VPKGVVVTKV 43
>d1ywxa1 d.12.1.3 (A:1-102) Ribosomal protein S24e {Methanococcus
maripaludis [TaxId: 39152]}
Length = 102
Score = 24.6 bits (54), Expect = 0.89
Identities = 4/29 (13%), Positives = 9/29 (31%), Gaps = 1/29 (3%)
Query: 10 DKVKKKYGSLGPDLVVVTLERSHTGLGIS 38
K+ + ++VV G +
Sbjct: 37 MKLVAVLNA-NKQVLVVDTLDQIFGKLEA 64
>d1xn9a_ d.12.1.3 (A:) Ribosomal protein S24e {Methanosarcina
mazei [TaxId: 2209]}
Length = 101
Score = 24.2 bits (53), Expect = 1.1
Identities = 5/29 (17%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 10 DKVKKKYGSLGPDLVVVTLERSHTGLGIS 38
+K+ + +L+V+ ++ G+ S
Sbjct: 37 NKLAAMLNA-PLELLVIQRIKTEYGMQES 64
>d1vaea_ b.36.1.1 (A:) Rhophilin-2 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 111
Score = 23.8 bits (51), Expect = 1.8
Identities = 11/39 (28%), Positives = 15/39 (38%), Gaps = 5/39 (12%)
Query: 25 VVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSASK 63
+ LG +L G+ V V L+P SAS
Sbjct: 18 GIHFTVEEGDLGFTLRGNTP-----VQVHFLDPHCSASL 51
>d2g1da1 d.12.1.3 (A:1-98) Ribosomal protein S24e {Thermoplasma
acidophilum [TaxId: 2303]}
Length = 98
Score = 23.9 bits (52), Expect = 1.8
Identities = 7/29 (24%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 10 DKVKKKYGSLGPDLVVVTLERSHTGLGIS 38
+ + K G +LV+V + TG
Sbjct: 38 ELIAKHEGV-DKELVIVDNNKQLTGKHEI 65
>d2v94a1 d.12.1.3 (A:1-93) Ribosomal protein S24e {Pyrococcus
abyssi [TaxId: 29292]}
Length = 93
Score = 23.4 bits (51), Expect = 2.0
Identities = 7/29 (24%), Positives = 11/29 (37%), Gaps = 1/29 (3%)
Query: 10 DKVKKKYGSLGPDLVVVTLERSHTGLGIS 38
K+ P+ V+ RS+ G S
Sbjct: 38 GKLVAMLDL-NPETTVIQYIRSYFGSYKS 65
>d1snna_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate
synthase, DHBP synthase, RibB {Archaeon
Methanocaldococcus jannaschii [TaxId: 2190]}
Length = 219
Score = 24.2 bits (52), Expect = 2.1
Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Query: 24 VVVTLERSHTGLGISLAGHKDRTKMAVFVCGLNPSGSAS----KTGSVLVGDELLEI 76
VTL R+ GL + GH + T + L P + G+ + +E
Sbjct: 145 GSVTLLRAAEGLVKNRQGHTEMTVALAELANLVPITTICEMMGDDGNAMSKNETKRY 201
>d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma
pneumoniae [TaxId: 2104]}
Length = 281
Score = 23.7 bits (51), Expect = 2.5
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 11 KVKKKYGSLGPDLVVVTLERSHTGLGIS 38
++K KY DLV+V E + G G+S
Sbjct: 28 QLKSKYQ---ADLVIVNAENTTHGKGLS 52
>d1iyjb1 a.170.1.1 (B:2403-2598) BRCA2 helical domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 196
Score = 23.3 bits (50), Expect = 3.1
Identities = 6/36 (16%), Positives = 11/36 (30%), Gaps = 1/36 (2%)
Query: 42 HKDRTKMAVFVCGLNPSGSASKTGSVL-VGDELLEI 76
R + V PS + K + V + +
Sbjct: 45 TLPRISLQAAVGDSVPSACSPKQLYMYGVSKACISV 80
>d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625
{Thermus thermophilus [TaxId: 274]}
Length = 252
Score = 22.5 bits (48), Expect = 6.4
Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 5/28 (17%)
Query: 11 KVKKKYGSLGPDLVVVTLERSHTGLGIS 38
++ +Y DLV+ E + G G+
Sbjct: 24 DIRDRY-----DLVIANGENAARGKGLD 46
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.133 0.371
Gapped
Lambda K H
0.267 0.0594 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 258,595
Number of extensions: 9085
Number of successful extensions: 90
Number of sequences better than 10.0: 1
Number of HSP's gapped: 71
Number of HSP's successfully gapped: 61
Length of query: 76
Length of database: 2,407,596
Length adjustment: 43
Effective length of query: 33
Effective length of database: 1,817,206
Effective search space: 59967798
Effective search space used: 59967798
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.2 bits)