Query psy18108
Match_columns 102
No_of_seqs 138 out of 1031
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 22:44:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18108.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18108hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f75_P Toxopain-2, cathepsin L 99.9 1.8E-23 6E-28 134.8 9.6 75 25-100 16-91 (106)
2 2l95_A Crammer, LP06209P; cyst 99.9 4.7E-23 1.6E-27 126.5 8.3 69 31-101 7-79 (80)
3 3tnx_A Papain; hydrolase, cyto 99.8 6.1E-20 2.1E-24 139.2 10.7 70 27-97 59-128 (363)
4 3qj3_A Cathepsin L-like protei 99.8 6.3E-20 2.2E-24 137.5 9.4 71 26-96 14-87 (331)
5 3qt4_A Cathepsin-L-like midgut 99.8 1.4E-19 4.9E-24 135.6 7.8 72 27-98 20-94 (329)
6 1by8_A Protein (procathepsin K 99.7 4.7E-18 1.6E-22 126.5 8.9 68 29-96 6-76 (314)
7 2c0y_A Procathepsin S; proenzy 99.7 3.7E-18 1.3E-22 127.1 8.0 68 29-96 7-77 (315)
8 1pci_A Procaricain; zymogen, h 99.7 6.3E-18 2.2E-22 126.2 9.0 69 27-96 15-83 (322)
9 1cs8_A Human procathepsin L; p 99.7 5.2E-18 1.8E-22 126.3 8.3 67 29-96 7-76 (316)
10 2o6x_A Procathepsin L1, secret 99.7 3.7E-17 1.3E-21 121.4 8.0 64 32-96 3-69 (310)
11 1xkg_A DER P I, major mite fec 99.5 9E-14 3.1E-18 103.4 7.5 56 33-96 7-63 (312)
12 3pdf_A Cathepsin C, dipeptidyl 98.7 1.6E-09 5.4E-14 83.9 0.0 48 49-97 135-183 (441)
13 3hhi_A Cathepsin B-like cystei 98.2 2E-07 6.9E-12 69.4 0.0 47 53-99 3-50 (325)
14 3pbh_A Procathepsin B; thiol p 97.3 0.00012 4.2E-09 54.1 3.2 38 61-100 11-48 (317)
15 2jsp_A Transcriptional regulat 36.7 18 0.00062 21.7 1.8 14 85-98 43-56 (87)
16 1wy3_A Villin; structural prot 33.9 21 0.00071 17.7 1.5 13 86-98 1-13 (35)
17 1und_A Advillin, P92; actin bi 31.2 24 0.00083 17.7 1.5 14 85-98 2-15 (37)
18 1b4u_A LIGA, LIGB, protocatech 23.0 57 0.002 21.2 2.5 19 82-100 109-129 (139)
19 2p7v_B Sigma-70, RNA polymeras 20.3 74 0.0025 16.8 2.3 20 79-98 19-38 (68)
No 1
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.90 E-value=1.8e-23 Score=134.78 Aligned_cols=75 Identities=31% Similarity=0.548 Sum_probs=66.1
Q ss_pred CCChHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCcceeeecccCCCCCHHHHHHhh-CCCCC
Q psy18108 25 TENPEHLKQFEKFIRDFSKSYPTKEEVAKRFAVFEDNLKLIEDLNKGEHGTATYGINHLSDLTREEMKSRL-GLNLS 100 (102)
Q Consensus 25 ~~~~~~~~~f~~f~~~y~K~Y~~~~e~~~R~~~F~~N~~~I~~hN~~~~~s~~lglN~faD~T~eEf~~~~-g~~~~ 100 (102)
.++.++...|++|+.+|+|.|.+.+|+..|+.+|++|+++|++||+. ..+|++|+|+|||||++||++++ |++.+
T Consensus 16 ~~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~-~~sy~lglN~FaDLT~eEF~~~~lg~~~~ 91 (106)
T 3f75_P 16 WKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQ-GYSYSLKMNHFGDLSRDEFRRKYLGFKKS 91 (106)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTS-CCSEEECCCTTTTCCHHHHHHHSCCBCC-
T ss_pred cCcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeeCCcccccCCHHHHHHHHcCCCCC
Confidence 34456888999999999999999889999999999999999999998 55899999999999999999976 45543
No 2
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.89 E-value=4.7e-23 Score=126.48 Aligned_cols=69 Identities=29% Similarity=0.523 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhcC---CCcceeeecccCCCCCHHHHHHh-hCCCCCC
Q psy18108 31 LKQFEKFIRDFSKSYPTKEEVAKRFAVFEDNLKLIEDLNKG---EHGTATYGINHLSDLTREEMKSR-LGLNLSK 101 (102)
Q Consensus 31 ~~~f~~f~~~y~K~Y~~~~e~~~R~~~F~~N~~~I~~hN~~---~~~s~~lglN~faD~T~eEf~~~-~g~~~~~ 101 (102)
+..|+.|+.+|+|.|.+.+|+..| .||++|++.|++||.. |..+|++|+|+|||||++|| +. .|++.|+
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~~~~ 79 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKKVPP 79 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSCCCC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCCCCC
Confidence 467999999999999988888899 9999999999999985 55689999999999999999 65 4676665
No 3
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=99.82 E-value=6.1e-20 Score=139.23 Aligned_cols=70 Identities=29% Similarity=0.514 Sum_probs=64.2
Q ss_pred ChHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCcceeeecccCCCCCHHHHHHhhCC
Q psy18108 27 NPEHLKQFEKFIRDFSKSYPTKEEVAKRFAVFEDNLKLIEDLNKGEHGTATYGINHLSDLTREEMKSRLGL 97 (102)
Q Consensus 27 ~~~~~~~f~~f~~~y~K~Y~~~~e~~~R~~~F~~N~~~I~~hN~~~~~s~~lglN~faD~T~eEf~~~~g~ 97 (102)
++.+..+|++|+.+|+|.|.+.+|+.+|+.+|++|+++|++||+++ .+|++|+|+|+|||++||+++++.
T Consensus 59 ~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~-~sy~~g~N~FaDlT~eEf~~~~~~ 128 (363)
T 3tnx_A 59 TERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKN-NSYWLGLNVFADMSNDEFKEKYTG 128 (363)
T ss_dssp HHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSC-CSEEECSCTTTTSCHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCC-CCeEEeccccccCCHHHHHHHhcc
Confidence 3467889999999999999999999999999999999999999875 479999999999999999998753
No 4
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=99.81 E-value=6.3e-20 Score=137.50 Aligned_cols=71 Identities=27% Similarity=0.400 Sum_probs=65.0
Q ss_pred CChHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhcC---CCcceeeecccCCCCCHHHHHHhhC
Q psy18108 26 ENPEHLKQFEKFIRDFSKSYPTKEEVAKRFAVFEDNLKLIEDLNKG---EHGTATYGINHLSDLTREEMKSRLG 96 (102)
Q Consensus 26 ~~~~~~~~f~~f~~~y~K~Y~~~~e~~~R~~~F~~N~~~I~~hN~~---~~~s~~lglN~faD~T~eEf~~~~g 96 (102)
.+..+...|++|+++|+|.|.+.+|+..|+.+|++|+++|++||++ +..+|++|+|+|+|||.+||+++++
T Consensus 14 ~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~ 87 (331)
T 3qj3_A 14 PSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTH 87 (331)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhc
Confidence 3556788999999999999999889999999999999999999985 6678999999999999999999875
No 5
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=99.79 E-value=1.4e-19 Score=135.57 Aligned_cols=72 Identities=24% Similarity=0.351 Sum_probs=64.8
Q ss_pred ChHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhcC---CCcceeeecccCCCCCHHHHHHhhCCC
Q psy18108 27 NPEHLKQFEKFIRDFSKSYPTKEEVAKRFAVFEDNLKLIEDLNKG---EHGTATYGINHLSDLTREEMKSRLGLN 98 (102)
Q Consensus 27 ~~~~~~~f~~f~~~y~K~Y~~~~e~~~R~~~F~~N~~~I~~hN~~---~~~s~~lglN~faD~T~eEf~~~~g~~ 98 (102)
+..++..|++|+++|+|.|.+.+|+..|+.+|++|+++|++||++ +..+|++|+|+|+|||.+||++++|.+
T Consensus 20 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~g~~ 94 (329)
T 3qt4_A 20 KSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLAYVNRG 94 (329)
T ss_dssp CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHHhcCCc
Confidence 345788999999999999999888999999999999999999984 667899999999999999999966654
No 6
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=99.74 E-value=4.7e-18 Score=126.48 Aligned_cols=68 Identities=28% Similarity=0.345 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhcC---CCcceeeecccCCCCCHHHHHHhhC
Q psy18108 29 EHLKQFEKFIRDFSKSYPTKEEVAKRFAVFEDNLKLIEDLNKG---EHGTATYGINHLSDLTREEMKSRLG 96 (102)
Q Consensus 29 ~~~~~f~~f~~~y~K~Y~~~~e~~~R~~~F~~N~~~I~~hN~~---~~~s~~lglN~faD~T~eEf~~~~g 96 (102)
.+...|++|+++|+|.|.+.+|+..|+.+|++|+++|++||++ |..+|++|+|+|+|||.+||++++.
T Consensus 6 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~ 76 (314)
T 1by8_A 6 ILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMT 76 (314)
T ss_dssp THHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSC
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhc
Confidence 3678899999999999999889999999999999999999974 4568999999999999999987653
No 7
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=99.74 E-value=3.7e-18 Score=127.09 Aligned_cols=68 Identities=29% Similarity=0.413 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhcC---CCcceeeecccCCCCCHHHHHHhhC
Q psy18108 29 EHLKQFEKFIRDFSKSYPTKEEVAKRFAVFEDNLKLIEDLNKG---EHGTATYGINHLSDLTREEMKSRLG 96 (102)
Q Consensus 29 ~~~~~f~~f~~~y~K~Y~~~~e~~~R~~~F~~N~~~I~~hN~~---~~~s~~lglN~faD~T~eEf~~~~g 96 (102)
.+...|++|+.+|+|.|.+.+|+..|+.+|++|+++|++||+. +..+|++|+|+|+|||.+||++++.
T Consensus 7 ~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~ 77 (315)
T 2c0y_A 7 TLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMS 77 (315)
T ss_dssp GGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhc
Confidence 4678899999999999988788889999999999999999974 4568999999999999999987653
No 8
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=99.74 E-value=6.3e-18 Score=126.18 Aligned_cols=69 Identities=26% Similarity=0.518 Sum_probs=62.7
Q ss_pred ChHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCcceeeecccCCCCCHHHHHHhhC
Q psy18108 27 NPEHLKQFEKFIRDFSKSYPTKEEVAKRFAVFEDNLKLIEDLNKGEHGTATYGINHLSDLTREEMKSRLG 96 (102)
Q Consensus 27 ~~~~~~~f~~f~~~y~K~Y~~~~e~~~R~~~F~~N~~~I~~hN~~~~~s~~lglN~faD~T~eEf~~~~g 96 (102)
+.++...|++|+.+|+|.|.+.+|+..|+.+|++|+++|++||++ ..+|++|+|+|+|||.+||++++.
T Consensus 15 e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~-~~~~~~g~N~FaDlt~eEf~~~~~ 83 (322)
T 1pci_A 15 TERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFADLSNDEFNEKYV 83 (322)
T ss_dssp HHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT-CCSEEECSCTTTTSCHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEecCccccCCHHHHHHHhc
Confidence 345677899999999999998889999999999999999999987 457999999999999999999874
No 9
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=99.74 E-value=5.2e-18 Score=126.31 Aligned_cols=67 Identities=28% Similarity=0.367 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhcC---CCcceeeecccCCCCCHHHHHHhhC
Q psy18108 29 EHLKQFEKFIRDFSKSYPTKEEVAKRFAVFEDNLKLIEDLNKG---EHGTATYGINHLSDLTREEMKSRLG 96 (102)
Q Consensus 29 ~~~~~f~~f~~~y~K~Y~~~~e~~~R~~~F~~N~~~I~~hN~~---~~~s~~lglN~faD~T~eEf~~~~g 96 (102)
.+...|++|+++|+|.| +.+|+..|+.+|++|+++|++||++ +..+|++|+|+|+|||.+||+++++
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~ 76 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMN 76 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhc
Confidence 36788999999999999 7778889999999999999999974 4568999999999999999998664
No 10
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=99.70 E-value=3.7e-17 Score=121.41 Aligned_cols=64 Identities=28% Similarity=0.472 Sum_probs=58.2
Q ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhcC---CCcceeeecccCCCCCHHHHHHhhC
Q psy18108 32 KQFEKFIRDFSKSYPTKEEVAKRFAVFEDNLKLIEDLNKG---EHGTATYGINHLSDLTREEMKSRLG 96 (102)
Q Consensus 32 ~~f~~f~~~y~K~Y~~~~e~~~R~~~F~~N~~~I~~hN~~---~~~s~~lglN~faD~T~eEf~~~~g 96 (102)
..|++|+.+|+|.|.+.+|+..| .+|++|+++|++||+. +..+|++|+|+|+|||.+||++++.
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~ 69 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYL 69 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhc
Confidence 57999999999999988888899 9999999999999975 4568999999999999999997654
No 11
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=99.47 E-value=9e-14 Score=103.39 Aligned_cols=56 Identities=38% Similarity=0.555 Sum_probs=51.2
Q ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCcceeeecccCCCCCHHHHHH-hhC
Q psy18108 33 QFEKFIRDFSKSYPTKEEVAKRFAVFEDNLKLIEDLNKGEHGTATYGINHLSDLTREEMKS-RLG 96 (102)
Q Consensus 33 ~f~~f~~~y~K~Y~~~~e~~~R~~~F~~N~~~I~~hN~~~~~s~~lglN~faD~T~eEf~~-~~g 96 (102)
.|++|+++|+|.|.+.+|+..|+.+|++|+++|++ |. + |+|+|+|||.+||++ ++|
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~-~------g~N~F~Dlt~eEf~~~~~~ 63 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG-G------AINHLSDLSLDEFKNRFLM 63 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC-C------CCCTTTTSCHHHHHHHHSB
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc-C------CCCcccCCCHHHHHHHhcC
Confidence 59999999999999888999999999999999999 74 2 999999999999998 445
No 12
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=98.71 E-value=1.6e-09 Score=83.89 Aligned_cols=48 Identities=15% Similarity=0.126 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcceeee-cccCCCCCHHHHHHhhCC
Q psy18108 49 EEVAKRFAVFEDNLKLIEDLNKGEHGTATYG-INHLSDLTREEMKSRLGL 97 (102)
Q Consensus 49 ~e~~~R~~~F~~N~~~I~~hN~~~~~s~~lg-lN~faD~T~eEf~~~~g~ 97 (102)
.++.+|+.+|++|+++|++||+... +|+++ +|+|+|||.+||+++++.
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~~-~~~~~~~n~faDlT~eEf~~~~~~ 183 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQK-SWTATTYMEYETLTLGDMIRRSGG 183 (441)
T ss_dssp --------------------------------------------------
T ss_pred hhHHHHHHHHHHHHHHHHHHHccCC-ceEeecccccccCCHHHHHHHhCC
Confidence 3556899999999999999998754 79998 899999999999998863
No 13
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=98.19 E-value=2e-07 Score=69.41 Aligned_cols=47 Identities=13% Similarity=0.051 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceeeecc-cCCCCCHHHHHHhhCCCC
Q psy18108 53 KRFAVFEDNLKLIEDLNKGEHGTATYGIN-HLSDLTREEMKSRLGLNL 99 (102)
Q Consensus 53 ~R~~~F~~N~~~I~~hN~~~~~s~~lglN-~faD~T~eEf~~~~g~~~ 99 (102)
.|......+.++|+++|+....+|++++| +|+|||.+||++++|..+
T Consensus 3 ~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~~g~~~ 50 (325)
T 3hhi_A 3 VAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVIK 50 (325)
T ss_dssp ------------------------------------------------
T ss_pred cccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHHhCCCC
Confidence 35567778889999999876568999999 999999999999988543
No 14
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=97.32 E-value=0.00012 Score=54.07 Aligned_cols=38 Identities=24% Similarity=0.216 Sum_probs=31.4
Q ss_pred HHHHHHHhhcCCCcceeeecccCCCCCHHHHHHhhCCCCC
Q psy18108 61 NLKLIEDLNKGEHGTATYGINHLSDLTREEMKSRLGLNLS 100 (102)
Q Consensus 61 N~~~I~~hN~~~~~s~~lglN~faD~T~eEf~~~~g~~~~ 100 (102)
+.++|+.+|+.+ .+|++++| |+|+|.||++.++|.+++
T Consensus 11 ~~~~i~~~N~~~-~~~~~~~n-f~~~~~e~~~~~lg~~~~ 48 (317)
T 3pbh_A 11 SDELVNYVNKRN-TTWQAGHN-FYNVDMSYLKRLCGTFLG 48 (317)
T ss_dssp CHHHHHHHHHHT-CSEEECCC-CSSCCHHHHHHTCCBCTT
T ss_pred cHHHHHHHHCCC-CCeEEeec-cccCCHHHHHHHcCCCCC
Confidence 457899999764 47999999 999999999998886543
No 15
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=36.68 E-value=18 Score=21.74 Aligned_cols=14 Identities=29% Similarity=0.477 Sum_probs=12.7
Q ss_pred CCCHHHHHHhhCCC
Q psy18108 85 DLTREEMKSRLGLN 98 (102)
Q Consensus 85 D~T~eEf~~~~g~~ 98 (102)
+||++||+..+|+.
T Consensus 43 gltpeeYR~kwGlp 56 (87)
T 2jsp_A 43 SMTPEEYREKWDLP 56 (87)
T ss_dssp CSCHHHHHHHTTCG
T ss_pred CCCHHHHHHHhCCC
Confidence 89999999999975
No 16
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=33.94 E-value=21 Score=17.74 Aligned_cols=13 Identities=31% Similarity=0.700 Sum_probs=9.0
Q ss_pred CCHHHHHHhhCCC
Q psy18108 86 LTREEMKSRLGLN 98 (102)
Q Consensus 86 ~T~eEf~~~~g~~ 98 (102)
+|++||.+.+|..
T Consensus 1 Lsd~dF~~vFgms 13 (35)
T 1wy3_A 1 LSDEDFKAVFGMT 13 (35)
T ss_dssp CCHHHHHHHHSSC
T ss_pred CCHHHHHHHHCCC
Confidence 5677887777754
No 17
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=31.24 E-value=24 Score=17.69 Aligned_cols=14 Identities=21% Similarity=0.465 Sum_probs=10.3
Q ss_pred CCCHHHHHHhhCCC
Q psy18108 85 DLTREEMKSRLGLN 98 (102)
Q Consensus 85 D~T~eEf~~~~g~~ 98 (102)
-+|++||.+.+|..
T Consensus 2 yLsd~dF~~vFgms 15 (37)
T 1und_A 2 YLSEQDFVSVFGIT 15 (37)
T ss_dssp CCCHHHHHHHHSSC
T ss_pred CCCHHHHHHHHCcC
Confidence 36788888887754
No 18
>1b4u_A LIGA, LIGB, protocatechuate 4,5-dioxygenase; extradiol type dioxygenase, non-heme iron protein; HET: DHB; 2.20A {Sphingomonas paucimobilis} SCOP: a.88.1.1 PDB: 1bou_A
Probab=23.02 E-value=57 Score=21.17 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=13.8
Q ss_pred cCCCCCHHHHHHhh--CCCCC
Q psy18108 82 HLSDLTREEMKSRL--GLNLS 100 (102)
Q Consensus 82 ~faD~T~eEf~~~~--g~~~~ 100 (102)
.+..+|.+||++++ |.+.|
T Consensus 109 ~mtg~s~eef~~mm~~ggr~~ 129 (139)
T 1b4u_A 109 SMTGMTQEEYAQMMIDGGRSP 129 (139)
T ss_dssp HTTTSCHHHHHHHHHTTCBCS
T ss_pred hccCCCHHHHHHHHHhcCCCC
Confidence 34789999999986 44443
No 19
>2p7v_B Sigma-70, RNA polymerase sigma factor RPOD; RSD, regulator of sigma 70, sigma 70 domain 4, transcription, regulation, helix-turn-helix; 2.60A {Escherichia coli} SCOP: a.4.13.2
Probab=20.27 E-value=74 Score=16.83 Aligned_cols=20 Identities=30% Similarity=0.479 Sum_probs=15.8
Q ss_pred ecccCCCCCHHHHHHhhCCC
Q psy18108 79 GINHLSDLTREEMKSRLGLN 98 (102)
Q Consensus 79 glN~faD~T~eEf~~~~g~~ 98 (102)
+++.+.++|.+|+...+|..
T Consensus 19 ~l~~~~g~s~~eIA~~lgis 38 (68)
T 2p7v_B 19 GIDMNTDYTLEEVGKQFDVT 38 (68)
T ss_dssp TTTSSSCCCHHHHHHHHTCC
T ss_pred ccCCCCCCCHHHHHHHHCcC
Confidence 44557899999999988864
Done!