Query psy18109
Match_columns 602
No_of_seqs 339 out of 1694
Neff 6.6
Searched_HMMs 46136
Date Fri Aug 16 22:45:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18109.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18109hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0164|consensus 100.0 7E-144 1E-148 1157.4 32.2 524 1-601 205-960 (1001)
2 KOG0162|consensus 100.0 3E-127 7E-132 1028.2 31.9 516 1-602 213-877 (1106)
3 COG5022 Myosin heavy chain [Cy 100.0 6E-112 1E-116 974.3 33.5 420 1-470 262-775 (1463)
4 PTZ00014 myosin-A; Provisional 100.0 1E-110 2E-115 962.8 36.8 435 1-481 291-818 (821)
5 cd01381 MYSc_type_VII Myosin m 100.0 3E-100 6E-105 866.1 32.6 403 1-462 192-612 (671)
6 cd01384 MYSc_type_XI Myosin mo 100.0 3E-100 7E-105 864.7 30.5 365 1-415 198-582 (674)
7 cd01378 MYSc_type_I Myosin mot 100.0 4.2E-99 9E-104 857.6 31.1 404 1-463 195-616 (674)
8 cd01383 MYSc_type_VIII Myosin 100.0 4E-99 9E-104 856.3 30.4 397 1-462 197-621 (677)
9 cd01377 MYSc_type_II Myosin mo 100.0 2.2E-98 5E-103 853.9 32.6 401 1-462 207-635 (693)
10 cd01387 MYSc_type_XV Myosin mo 100.0 1.6E-98 3E-103 852.4 31.0 400 1-462 193-620 (677)
11 cd01385 MYSc_type_IX Myosin mo 100.0 2.3E-98 5E-103 852.8 32.2 403 1-462 203-634 (692)
12 cd01380 MYSc_type_V Myosin mot 100.0 3.9E-98 8E-103 851.7 30.3 398 1-462 198-634 (691)
13 cd01382 MYSc_type_VI Myosin mo 100.0 2.2E-97 5E-102 847.5 33.3 425 1-462 197-660 (717)
14 smart00242 MYSc Myosin. Large 100.0 5.7E-96 1E-100 834.7 31.7 372 1-419 201-589 (677)
15 cd00124 MYSc Myosin motor doma 100.0 4.7E-95 1E-99 828.9 31.3 402 1-462 193-622 (679)
16 cd01379 MYSc_type_III Myosin m 100.0 9.8E-95 2.1E-99 817.6 31.7 387 1-463 193-599 (653)
17 PF00063 Myosin_head: Myosin h 100.0 9.2E-92 2E-96 807.1 27.8 375 1-419 196-610 (689)
18 cd01386 MYSc_type_XVIII Myosin 100.0 7E-90 1.5E-94 787.9 30.2 376 1-410 194-644 (767)
19 KOG0163|consensus 100.0 1.5E-88 3.3E-93 730.4 30.2 393 1-415 250-680 (1259)
20 KOG0161|consensus 100.0 5.5E-88 1.2E-92 808.6 26.2 432 1-480 281-816 (1930)
21 KOG0160|consensus 100.0 4.2E-87 9E-92 753.8 29.8 429 1-480 202-713 (862)
22 KOG4229|consensus 100.0 5E-61 1.1E-65 554.3 15.0 370 1-415 255-682 (1062)
23 PF06017 Myosin_TH1: Myosin ta 99.5 2.9E-15 6.3E-20 147.9 3.0 95 470-602 57-157 (199)
24 PF00612 IQ: IQ calmodulin-bin 97.5 0.00013 2.9E-09 45.7 3.6 21 440-460 1-21 (21)
25 smart00015 IQ Short calmodulin 96.8 0.0012 2.6E-08 43.6 3.0 22 439-460 2-23 (26)
26 PF00612 IQ: IQ calmodulin-bin 96.1 0.0062 1.3E-07 38.1 2.7 20 463-482 1-20 (21)
27 smart00015 IQ Short calmodulin 94.9 0.022 4.8E-07 37.5 2.3 21 462-482 2-22 (26)
28 KOG0160|consensus 94.8 0.079 1.7E-06 62.5 8.0 67 436-503 692-758 (862)
29 KOG0377|consensus 92.6 1.1 2.4E-05 48.8 11.2 30 432-461 9-38 (631)
30 KOG0520|consensus 89.0 0.19 4.1E-06 59.7 1.6 52 436-487 806-857 (975)
31 KOG4427|consensus 87.7 1 2.2E-05 52.0 6.1 35 436-476 26-60 (1096)
32 cd01262 PH_PDK1 3-Phosphoinosi 78.8 0.55 1.2E-05 40.5 -0.4 54 474-528 11-65 (89)
33 PF14593 PH_3: PH domain; PDB: 66.6 1 2.2E-05 40.1 -1.7 53 474-528 23-76 (104)
34 KOG0942|consensus 65.8 6.7 0.00015 46.5 4.2 28 437-464 26-53 (1001)
35 PTZ00014 myosin-A; Provisional 61.4 11 0.00024 45.3 5.0 37 463-499 777-813 (821)
36 KOG2128|consensus 58.3 15 0.00033 45.6 5.4 47 441-487 593-646 (1401)
37 KOG0377|consensus 53.6 15 0.00033 40.4 4.0 24 565-588 197-220 (631)
38 KOG0164|consensus 53.2 21 0.00045 41.6 5.2 30 464-493 697-726 (1001)
39 KOG0520|consensus 47.4 24 0.00052 42.6 4.8 43 442-484 891-935 (975)
40 KOG4427|consensus 47.4 38 0.00083 39.8 6.1 40 445-484 12-51 (1096)
41 PF15157 IQ-like: IQ-like 45.9 19 0.00042 30.8 2.7 20 441-460 48-67 (97)
42 PF07499 RuvA_C: RuvA, C-termi 39.6 38 0.00083 25.4 3.3 25 55-79 3-27 (47)
43 PHA01976 helix-turn-helix prot 35.3 44 0.00096 26.3 3.2 57 57-125 6-62 (67)
44 cd00934 PTB Phosphotyrosine-bi 31.5 83 0.0018 27.6 4.7 54 477-530 40-93 (123)
45 KOG0942|consensus 30.9 76 0.0017 38.2 5.3 44 435-485 8-51 (1001)
46 PF10480 ICAP-1_inte_bdg: Beta 30.1 29 0.00063 34.1 1.6 41 479-521 108-148 (200)
47 PF08763 Ca_chan_IQ: Voltage g 29.4 63 0.0014 23.1 2.7 17 442-458 11-27 (35)
48 KOG2128|consensus 27.4 1.1E+02 0.0023 38.7 5.9 47 441-487 566-616 (1401)
49 KOG0162|consensus 26.8 88 0.0019 36.9 4.8 33 465-497 698-730 (1106)
50 KOG0163|consensus 26.3 1.2E+02 0.0026 35.9 5.7 25 439-463 812-836 (1259)
51 PF10440 WIYLD: Ubiquitin-bind 25.1 1.1E+02 0.0024 25.0 3.8 39 53-92 9-47 (65)
52 COG4056 McrC Methyl coenzyme M 25.0 12 0.00026 35.6 -2.0 28 62-89 88-115 (204)
53 COG5022 Myosin heavy chain [Cy 24.3 1.9E+02 0.004 36.9 7.2 89 439-527 815-912 (1463)
54 PF00640 PID: Phosphotyrosine 21.2 1.5E+02 0.0032 26.7 4.5 54 477-530 50-104 (140)
No 1
>KOG0164|consensus
Probab=100.00 E-value=6.9e-144 Score=1157.36 Aligned_cols=524 Identities=36% Similarity=0.608 Sum_probs=493.7
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|++++++++|+|++++..|+||++|.. .+.+++|+.+|+.+.+||++|||+++|+.+||+|+|
T Consensus 205 QLL~G~~e~~Lr~l~Ler~~~~Y~ylnqg~~-------------~v~sinD~~dfk~V~~Am~vIgFs~eEVe~v~~iiA 271 (1001)
T KOG0164|consen 205 QLLRGGEEQLLRQLGLERNPQSYNYLNQGSA-------------KVSSINDASDFKAVQKAMRVIGFSEEEVESVLSIIA 271 (1001)
T ss_pred HHHcCCcHHHHHHhccccCcchhhhhhhhhh-------------hhcccccHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 8999999999999999999999999999955 889999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|...+ +..-+.+...|+.+|+||++.+++|++|||+|++ .+ ++|.+.+++|++||.|+|
T Consensus 272 avLhLGNv~f~~~e-----d~~~~~~~~~l~~~aell~v~~del~~aL~~Rtv--aa-----~~e~v~k~hn~~qA~YaR 339 (1001)
T KOG0164|consen 272 AVLHLGNVEFADNE-----DSSGIVNGAQLKYIAELLSVTGDELERALTSRTV--AA-----GGEIVLKQHNVEQASYAR 339 (1001)
T ss_pred HHHhccceEEeecC-----cccccchhHHHHHHHHHHcCCHHHHHHHHHHHHH--Hh-----ccchhhccccHHHHHHHH
Confidence 99999999999854 2344666689999999999999999999999999 88 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCC----CCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPS----GKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVML 236 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~----~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f 236 (602)
|||||++|+|||+|||.+||++|.+... ...++||+|||||||+|+ .|||||||||||||||||+|++.++
T Consensus 340 DAlAKaiY~RlF~Wiv~rIn~~i~~~~~~~~~~~~~Vigvldiygfeif~-----~NSFEQfcINYCNEKLQQlFIel~L 414 (1001)
T KOG0164|consen 340 DALAKAIYSRLFTWIVNRINRSIEVKGVITLRKGNTVIGVLDIYGFEIFQ-----DNSFEQFCINYCNEKLQQLFIELVL 414 (1001)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheecccccccccCceEEEEEEeeeEEeec-----CCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987632 124899999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHhccCccccccccChHHHHHHHhcCcccccccccccC------CHHHHHHHHhhccCCCCCCcCCCCCCCCCc
Q psy18109 237 REEQEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES------SDEAFLLKLGSYSSSLTPERGRGGVRTPGV 310 (602)
Q Consensus 237 ~~eqeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec------tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~ 310 (602)
++|||||++|||+|++|+||||++||||+|.+..||++||||+| ||.+||++|++.+++|+||.++..
T Consensus 415 KqEQEEY~rEgI~W~~i~YFnN~iIcdLvE~~~~GIlailDe~Cl~~G~vtD~tfL~~l~~~~~~H~Hy~sr~~------ 488 (1001)
T KOG0164|consen 415 KQEQEEYEREGIEWTHIDYFNNKIICDLVEQPHKGILAILDEACLRPGTVTDETFLEKLNQKLKKHPHYTSRKL------ 488 (1001)
T ss_pred HhhHHHHHhcCCCceehhhcCCceeeehhccCccchhhhhhHHhcCCCccchHHHHHHHHHHhhhCCcchhhhc------
Confidence 99999999999999999999999999999999999999999999 999999999999999999998854
Q ss_pred cCCCCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC-------CCCCCcc
Q psy18109 311 LSTPSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET-------RVPEAQP 383 (602)
Q Consensus 311 ~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~-------~r~~Tv~ 383 (602)
..+|++++..+|+|.||||+|+|+|.||++||+|.|++|+.++|++|+||++++|||+|+ |||+|+|
T Consensus 489 ------~~~dksl~~~~Fri~HYAG~V~YsV~gFidKN~D~Lf~dlk~~m~~s~~~~l~~~fpeG~~~~~~~tkRP~Tag 562 (1001)
T KOG0164|consen 489 ------KQTDKSLGFSDFRITHYAGDVTYSVEGFIDKNNDLLFQDLKRLMYNSKNPLLKSLFPEGNPDIAEVTKRPPTAG 562 (1001)
T ss_pred ------cccccccCccceeEEEeccceEEEEEeeeccCccHHHHHHHHHHHhcCCchHHHhCCCCChhHHhhhcCCCcHH
Confidence 467899999999999999999999999999999999999999999999999999999987 8999999
Q ss_pred chhhccccC------CCCceeEEEecccCCCCCCCCcc------------------------------------cccccc
Q psy18109 384 TRFRISILG------SSTLKYSILKVCPNIVDRPSMDE------------------------------------IKLCCR 421 (602)
Q Consensus 384 s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd------------------------------------yk~L~~ 421 (602)
++||+||.. +++|+| |||||||+.|+|+.|| |||+|+
T Consensus 563 t~Fk~Sm~~Lv~nL~sKeP~Y-vRcikPNe~k~~~~fd~e~~~hqv~ylGLleNvrVrrAgfahRq~Y~~FL~RYKmi~~ 641 (1001)
T KOG0164|consen 563 TLFKNSMAALVKNLASKEPNY-VRCIKPNEHKQPGQFDEERVRHQVRYLGLLENVRVRRAGFAHRQPYERFLLRYKMICE 641 (1001)
T ss_pred HHHHHHHHHHHHHHhhcCCCe-EEeeccccccCccccchhhhHHHHHHHHHHhhhhhhhcccccccchHHHHHHHHhhCc
Confidence 999999987 999999 9999999999999999 999998
Q ss_pred C------------Cc------------------------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 422 G------------SV------------------------DVSVFELEEFRRDRLVDLAVLIQKVWRGYHQRKDFLKRKRS 465 (602)
Q Consensus 422 g------------gv------------------------~~tlf~LE~~R~~~l~~~A~~IQk~~Rg~~aRk~y~k~r~a 465 (602)
. || |+|||.||+.|++++..+++.|||+||||++|.+|++||++
T Consensus 642 ~TWPn~~~g~dkd~v~vL~e~~g~~~d~a~G~TKIFIRsPrTLF~lEe~r~~~l~~lvtllQK~~RG~~~R~ry~rmka~ 721 (1001)
T KOG0164|consen 642 STWPNWRGGSDKDGVKVLLEHLGLAGDVAFGRTKIFIRSPRTLFALEEQRAERLPSLVTLLQKAWRGWLARQRYRRMKAS 721 (1001)
T ss_pred ccCCCCCCCCchhHHHHHHHHhccchhhhcCceeEEEecchhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh--------------------------------------------------------------------
Q psy18109 466 QIIIASAWRSWR-------------------------------------------------------------------- 477 (602)
Q Consensus 466 ai~IQ~~~R~~~-------------------------------------------------------------------- 477 (602)
++.|+ |||+|+
T Consensus 722 ~~ii~-wyR~~K~ks~v~el~~~~rg~k~~r~ygk~~~WP~pP~~Lr~~~~~L~~lf~rwra~~~~~~ipp~~~~qlr~K 800 (1001)
T KOG0164|consen 722 ATIIR-WYRRYKLKSYVQELQRRFRGAKQMRDYGKSIRWPAPPLVLREFEELLRELFIRWRAWQILKSIPPSDKPQLRQK 800 (1001)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 77666 999887
Q ss_pred --------------------------------------------------------------------hhhhHHhhhhhh
Q psy18109 478 --------------------------------------------------------------------FVPILFVLSTSS 489 (602)
Q Consensus 478 --------------------------------------------------------------------~r~r~l~lt~~a 489 (602)
.+.|.+++|+.+
T Consensus 801 i~A~e~lkGkk~~~gqsr~w~gdyL~~~~~~p~~~~~~~~~~~~l~~~e~fg~Vlfs~~V~K~NrfnK~~~R~lllTd~~ 880 (1001)
T KOG0164|consen 801 IAASEALKGKKANWGQSRAWIGDYLGSQEENPGYSATFKNRLQQLKGSETFGPVLFSSHVKKVNRFNKPRSRALLLTDRH 880 (1001)
T ss_pred HHHHHHhcCCcccccccchhhhhhcccCCCCCCcchhhHHHHHHhhccCCccceeehhhHHHhcccCCccceeEEeecCe
Confidence 677999999999
Q ss_pred hhhhhhhhhhhhc-eecccceeEEEeccCCCcEEEEEecCCCCCCCCCcCccccCCCCCCCccccCccccccccccccCC
Q psy18109 490 MLILDHRTLQIKY-RVPASEIYRLSLSPYLDDIAVFHIRAPSPSSCSDASSSFLGGGGGGTHHHHHQMGCLFHSEVHGKG 568 (602)
Q Consensus 490 i~ild~~k~~~kr-ri~l~~I~~vs~S~~~D~~~v~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 568 (602)
++++|++|.++++ .||+.+++|||||+++|++||||+.+.+|. ..+|
T Consensus 881 v~kld~~K~k~mK~~I~l~nltgiSVss~~D~LfvlH~~~~~Dl--------------------------------v~~~ 928 (1001)
T KOG0164|consen 881 VYKLDPKKQKVMKQTIPLANLTGISVSSGSDQLFVLHVSDNKDL--------------------------------VVCL 928 (1001)
T ss_pred EEEecchHhhHhhcccchhhccceeeecCCCceEEEEecCCcch--------------------------------hhhh
Confidence 9999999966555 799999999999999999999999988787 4458
Q ss_pred CcccccCchhHHHHHHHHHHHHHhCCCCccccC
Q psy18109 569 DFVFQTGHVIEIVTKLFLVIQNAVGKPPEVNIA 601 (602)
Q Consensus 569 ~~~~~~~~~~e~~~~l~~~~~~~~~~~~~v~~~ 601 (602)
|.+++++||||+||+|+.+++++ |+.++|||+
T Consensus 929 ~~~~~e~rVgElvg~l~~~~~~~-~r~l~V~vt 960 (1001)
T KOG0164|consen 929 DSVLQEDRVGELVGKLAAHYNDE-GRSLNVNVT 960 (1001)
T ss_pred hhhhhHHHHHHHHHHHHHHHhhh-cceeeEEec
Confidence 88999999999999999999999 999999985
No 2
>KOG0162|consensus
Probab=100.00 E-value=3.4e-127 Score=1028.24 Aligned_cols=516 Identities=31% Similarity=0.515 Sum_probs=472.8
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
||+.|||++.|..||+ ..|+.|.||+.++|+ .++++||..+|++|+.||++||+.++||+.||++||
T Consensus 213 Q~~kgAs~~~r~t~Gi-~~pe~Y~Y~~~sg~~------------s~D~idd~kdfq~Tl~AM~vIGi~~~eQ~~v~rmva 279 (1106)
T KOG0162|consen 213 QLTKGASQEYRQTFGI-QEPEYYVYLNASGCY------------SVDDIDDRKDFQETLHAMKVIGINQEEQDEVLRMVA 279 (1106)
T ss_pred hhhcCccHHHHhhhCc-CCchheeeeccccce------------eccccchHHHHHHHHHHheeccCChHHHHHHHHHHH
Confidence 8999999999999999 789999999999998 999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
+|||||||.|.+++ ..+.|.+.+.++.+|.|||||+..|++.||.|.| .+.| |++.|++.++||++||.+.|
T Consensus 280 ~IL~lGNIsF~Ee~-----~~a~V~~~~~~~f~ayLlgi~s~~l~~~Lt~R~M--~s~~-G~kr~~~~v~LNv~QA~~~R 351 (1106)
T KOG0162|consen 280 GILHLGNISFIEEG-----NYAAVSDKSVLEFPAYLLGIDSARLEEKLTSRIM--ESKW-GGKREVIHVPLNVEQASYTR 351 (1106)
T ss_pred HHHhccceeEEeeC-----CcceeccchHHHhHHHHhcCCHHHHHHHHHHHHH--hhcc-cccceeEEecccHHHHHHHH
Confidence 99999999999843 3478999999999999999999999999999999 6643 45669999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||.|||+|||++||.+|........++||||||||||||+ +||||||||||+||||||.|++++++.||
T Consensus 352 DAlakaiy~~lFD~lV~rvNkam~~~~~~~~~sIGiLDIYGFEIFe-----~N~FEQ~CINfVNEKLQQIFIeLTLKaEQ 426 (1106)
T KOG0162|consen 352 DALAKAIYARLFDWLVERVNKAMQAFKGSEEYSIGILDIYGFEIFE-----NNGFEQFCINFVNEKLQQIFIELTLKAEQ 426 (1106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCccccceeeEEeeeeeecc-----cCCHHHHHHHHHHHHHHHHHHHHhhhhhH
Confidence 9999999999999999999999986555456899999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccccChHHHHHHHhcC-cccccccccccC---------CHHHHHHHHhhccCCCCCCcCCCCCCCCCc
Q psy18109 241 EEYRRENIEWCYVEFFNNSAICDIIETN-SHGILSLLDEES---------SDEAFLLKLGSYSSSLTPERGRGGVRTPGV 310 (602)
Q Consensus 241 eeY~~EGI~w~~i~~~dN~~~~dLie~~-~~GIl~lLDeec---------tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~ 310 (602)
|||.+|||.|++|+||||+.+|||||.+ |+|||++|||.| .|.+|+++|+..++.||||.++
T Consensus 427 EeYvrE~I~WTpIkYFnNKvVCDLIE~K~PPGims~ldD~~At~Ha~~~~aDqa~~qrLn~~~~s~phF~~~-------- 498 (1106)
T KOG0162|consen 427 EEYVREGIKWTPIKYFNNKVVCDLIENKRPPGIMSALDDVCATAHADSEGADQALLQRLNKLFGSHPHFESR-------- 498 (1106)
T ss_pred HHHHHhcccccchhhcCCeeeeehhhccCCchHHHHHHHHHHHhccccchhHHHHHHHHHHHhcCCCccccc--------
Confidence 9999999999999999999999999964 899999999999 8999999999999999999664
Q ss_pred cCCCCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC-----CCCCCccch
Q psy18109 311 LSTPSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET-----RVPEAQPTR 385 (602)
Q Consensus 311 ~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~-----~r~~Tv~s~ 385 (602)
...|.|+||||+|+||++||+|||||.|..|+++||+.|+++|++.|||+.. +||+|+|++
T Consensus 499 --------------s~~FvIkHYAGdVtYdi~G~~drNrD~L~~DlieLm~ts~~~Fl~slFPe~v~~dskrRP~Tag~k 564 (1106)
T KOG0162|consen 499 --------------SNGFVIKHYAGDVTYDIDGFCDRNRDVLFKDLIELMQTSENPFLKSLFPENVDADSKRRPPTAGDK 564 (1106)
T ss_pred --------------cCceEEEEeccceeeecccccccchhHHHHHHHHHHhccchHHHHHhCchhhcccccCCCCCchhh
Confidence 4679999999999999999999999999999999999999999999999865 789999999
Q ss_pred hhccccC------CCCceeEEEecccCCCCCCCCcc------------------------------------cccccc--
Q psy18109 386 FRISILG------SSTLKYSILKVCPNIVDRPSMDE------------------------------------IKLCCR-- 421 (602)
Q Consensus 386 fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd------------------------------------yk~L~~-- 421 (602)
.++|.++ .|+||| |||||||++|+|+.|| |.+|+|
T Consensus 565 IkkqANdLVeTLmKc~P~Y-IR~IKPNeTK~pnD~ee~~V~HQveYLGLqENiRvRRAGfAYRr~F~kF~qRyailsp~t 643 (1106)
T KOG0162|consen 565 IKKQANDLVETLMKCQPHY-IRCIKPNETKSPNDWEESRVKHQVEYLGLQENIRVRRAGFAYRRAFDKFAQRYAILSPQT 643 (1106)
T ss_pred HHhhHHHHHHHHHhcCcce-eEeeCCCCCCCCccHHHHHHHHHHHhcchhhheeehhhhhHHHHHHHHHHHHheecCccc
Confidence 9999887 999999 9999999999999999 566666
Q ss_pred -----C----------------------Cc-------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 422 -----G----------------------SV-------DVSVFELEEFRRDRLVDLAVLIQKVWRGYHQRKDFLKRKRSQI 467 (602)
Q Consensus 422 -----g----------------------gv-------~~tlf~LE~~R~~~l~~~A~~IQk~~Rg~~aRk~y~k~r~aai 467 (602)
| |+ |++||.||++|+++....|..||++||.|.+|++|.+||..+.
T Consensus 644 ~~twqGD~~~av~~il~~~~m~~~qyQmG~tkVFiKnPEsLF~LEemRer~~d~~A~~IQkAWRrfv~rrky~k~ree~t 723 (1106)
T KOG0162|consen 644 WPTWQGDEKQAVEHILRDVNMPSDQYQMGVTKVFIKNPESLFLLEEMRERKWDGMARRIQKAWRRFVARRKYEKMREEAT 723 (1106)
T ss_pred ccccccchHHHHHHHHHhcCCChhHhhccceeEEecChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 32 8899999999999999999999999999999999999998654
Q ss_pred HHH------------HHH---------------------------------HhhhhhhhHHhhhhhhhhhhhhhh-----
Q psy18109 468 IIA------------SAW---------------------------------RSWRFVPILFVLSTSSMLILDHRT----- 497 (602)
Q Consensus 468 ~IQ------------~~~---------------------------------R~~~~r~r~l~lt~~ai~ild~~k----- 497 (602)
.+. +++ |+++..+|.++||.+.+|++.+++
T Consensus 724 ~ll~gKKeRRr~Si~R~F~GDYl~~~e~~~l~~~vgkkekV~Fa~~~tK~~R~~k~~kr~llLT~k~lylig~~kvk~gp 803 (1106)
T KOG0162|consen 724 KLLLGKKERRRYSINRNFVGDYLGLEEHPTLQQFVGKKEKVIFADTVTKYDRRFKPLKRDLLLTPKCLYLIGREKVKNGP 803 (1106)
T ss_pred HHhcchHHHHHHHHHHHHhhhhccccCCchhhhhhcccceEEEEeeecccccccccccceEEeccceEEEEeehhhhcCc
Confidence 432 221 333367799999999999997763
Q ss_pred ------hhhhceecccceeEEEeccCCCcEEEEEecCCCCCCCCCcCccccCCCCCCCccccCccccccccccccCCCcc
Q psy18109 498 ------LQIKYRVPASEIYRLSLSPYLDDIAVFHIRAPSPSSCSDASSSFLGGGGGGTHHHHHQMGCLFHSEVHGKGDFV 571 (602)
Q Consensus 498 ------~~~krri~l~~I~~vs~S~~~D~~~v~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 571 (602)
..+++++++..|.+||||++|||+++|+..+. . +|-+
T Consensus 804 ekg~~~e~~~~kidv~~I~sVsLs~~QDD~~~l~~~~~-~------------------------------------~d~l 846 (1106)
T KOG0162|consen 804 EKGKVTEVLKRKIDVPQIKSVSLSNLQDDWVILYLGND-Q------------------------------------YDSL 846 (1106)
T ss_pred cccchhhhhhhccchhhhceeccccccccEEEEEecCC-C------------------------------------cchH
Confidence 34789999999999999999999999999541 1 2336
Q ss_pred cccCchhHHHHHHHHHHHHHhCCCCccccCC
Q psy18109 572 FQTGHVIEIVTKLFLVIQNAVGKPPEVNIAP 602 (602)
Q Consensus 572 ~~~~~~~e~~~~l~~~~~~~~~~~~~v~~~~ 602 (602)
+++-...|++|.|.++|++.+++++++.+.|
T Consensus 847 l~t~FKTEf~t~L~k~~~e~~n~~l~l~~~~ 877 (1106)
T KOG0162|consen 847 LETPFKTEFITLLKKRYEERTNRKLQLKFGS 877 (1106)
T ss_pred hhhhhHHHHHHHHHHHHHHhhcCceeEEecc
Confidence 8889999999999999999999999999875
No 3
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=100.00 E-value=5.5e-112 Score=974.33 Aligned_cols=420 Identities=34% Similarity=0.533 Sum_probs=385.3
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|+++++++.+++ ++|++|.||++++|. .++|+||+++|+.|+.||++|||+.+||.+||++||
T Consensus 262 Qll~G~~~~~k~~~~~-~~~~dY~Yl~~~~~~------------~I~gIdD~kefk~t~~AlktiGi~~eeq~~IF~iLA 328 (1463)
T COG5022 262 QLLAGDPEELKKLLLL-QNPKDYIYLSQGGCD------------KIDGIDDAKEFKITLDALKTIGIDEEEQDQIFKILA 328 (1463)
T ss_pred hHhcCChHHHHHHhhc-cChHhhHhHhhcCCC------------cCCCcccHHHHHHHHHHHHHhCCChHHHHHHHHHHH
Confidence 8999977777777776 899999999999997 899999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|.. +.++++.+.+.+.++.+|.|||||++.|.++|+.|.+ ++ ++|.|.+++|.+||..+|
T Consensus 329 aILhiGNIef~~----~r~g~a~~~~~~~~~~~c~LLgId~~~f~k~lvk~~i--kt-----~~E~i~~~~n~~QA~~ir 397 (1463)
T COG5022 329 AILHIGNIEFKE----DRNGAAIFSDNSVLDKACYLLGIDPSLFVKWLVKRQI--KT-----GGEWIVVPLNLEQALAIR 397 (1463)
T ss_pred HHHhhcceeeee----cccchhhcCCchHHHHHHHHhCCCHHHHHHHHHHhHh--hc-----CceEEEecCCHHHHHHHH
Confidence 999999999998 4456788999999999999999999999999999999 88 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||++||+|||++||.+|..... ..++||||||||||+|+ .|||||||||||||||||+||+|||+.||
T Consensus 398 dslAK~lY~~lFdwiV~rIN~sL~~~~~-~~~fIGVLDIyGFEiFE-----kNSFEQlCINYtNEKLQQ~Fn~h~FklEQ 471 (1463)
T COG5022 398 DSLAKALYSNLFDWIVDRINKSLDHSAA-ASNFIGVLDIYGFEIFE-----KNSFEQLCINYTNEKLQQFFNQHMFKLEQ 471 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCccc-cccceeEEeecchhhhc-----cCcHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999986554 34799999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccccChHHHHHHHhc-CcccccccccccC-----CHHHHHHHHhhccC--CCCCCcCCCCCCCCCccC
Q psy18109 241 EEYRRENIEWCYVEFFNNSAICDIIET-NSHGILSLLDEES-----SDEAFLLKLGSYSS--SLTPERGRGGVRTPGVLS 312 (602)
Q Consensus 241 eeY~~EGI~w~~i~~~dN~~~~dLie~-~~~GIl~lLDeec-----tD~~fl~kl~~~~~--~~~~~~~~~~~~~p~~~~ 312 (602)
|||.+|||+|++|+|+||++||||||+ .|.|||++||||| ||++|..||.+.+. ++++|.++
T Consensus 472 EeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~---------- 541 (1463)
T COG5022 472 EEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFKKS---------- 541 (1463)
T ss_pred HHHHHhcCcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccCcccccc----------
Confidence 999999999999999999999999998 4789999999999 99999999999886 44666443
Q ss_pred CCCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC-----CCCCCccchhh
Q psy18109 313 TPSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET-----RVPEAQPTRFR 387 (602)
Q Consensus 313 ~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~-----~r~~Tv~s~fk 387 (602)
+.....|+|+||||+|+|+|+||++||+|+++.++.+|+.+|+|+++..||++.. .+++|+|++||
T Consensus 542 ---------rf~~~~FvvkHYAgDVeY~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~~~~K~~~pT~gs~~K 612 (1463)
T COG5022 542 ---------RFRDNKFVVKHYAGDVEYDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEENIESKGRFPTLGSRFK 612 (1463)
T ss_pred ---------ccCCCceEEEeecccceeeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhhccccCCCCcHHHHHH
Confidence 2356789999999999999999999999999999999999999999999999433 67999999999
Q ss_pred ccccC------CCCceeEEEecccCCCCCCCCcc------------------------------------ccccccC---
Q psy18109 388 ISILG------SSTLKYSILKVCPNIVDRPSMDE------------------------------------IKLCCRG--- 422 (602)
Q Consensus 388 ~sl~~------~t~phy~IRCIKPN~~k~p~~fd------------------------------------yk~L~~g--- 422 (602)
.||++ +|+||| |||||||.+|+|+.|| |++|.|.
T Consensus 613 ~sl~~Lm~tl~sTqphy-IRCIkPN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~ 691 (1463)
T COG5022 613 ESLNSLMSTLNSTQPHY-IRCIKPNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSW 691 (1463)
T ss_pred HHHHHHHHHHHhcCCce-eEeeCCCcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccc
Confidence 99987 999999 9999999999999999 7777761
Q ss_pred ------------------------------Cc------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 423 ------------------------------SV------DVSVFELEEFRRDRLVDLAVLIQKVWRGYHQRKDFLKRKRSQ 466 (602)
Q Consensus 423 ------------------------------gv------~~tlf~LE~~R~~~l~~~A~~IQk~~Rg~~aRk~y~k~r~aa 466 (602)
|+ ..+|+.||++|...+..+++.||++|||+..|++|.+..+.+
T Consensus 692 ~~~~~~~~~~~~~~~~IL~~~~id~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i 771 (1463)
T COG5022 692 TGEYTWKEDTKNAVKSILEELVIDSSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRI 771 (1463)
T ss_pred cccccchhHHHHHHHHHHHhhcCChhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 225889999999999999999999999999999998665443
Q ss_pred HHHH
Q psy18109 467 IIIA 470 (602)
Q Consensus 467 i~IQ 470 (602)
..||
T Consensus 772 ~~~~ 775 (1463)
T COG5022 772 KKIQ 775 (1463)
T ss_pred HHHH
Confidence 3333
No 4
>PTZ00014 myosin-A; Provisional
Probab=100.00 E-value=9.8e-111 Score=962.81 Aligned_cols=435 Identities=23% Similarity=0.387 Sum_probs=397.1
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|+++++|++|+| .++++|+||+++ |. .++++||+++|++|++||++|||+++|+.+||+|||
T Consensus 291 qLl~G~~~~~~~~l~L-~~~~~y~yL~~~-~~------------~~~~~dD~~~f~~~~~A~~~lg~s~~e~~~If~ila 356 (821)
T PTZ00014 291 QLLKGANDEMKEKYKL-KSLEEYKYINPK-CL------------DVPGIDDVKDFEEVMESFDSMGLSESQIEDIFSILS 356 (821)
T ss_pred HHHhCCCHHHHHHcCC-CChHhccccCCC-Cc------------cCCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7999999999999999 689999999966 44 789999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecCh--HHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSND--YELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATV 158 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~--~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~ 158 (602)
||||||||+|.+.+..+..+.+.+.+. +.+..+|+|||||+++|.++||+|++ .+ ++|.+.++++++||..
T Consensus 357 aILhLGNi~F~~~~~~~~~~~~~i~~~~~~~l~~~a~LLgv~~~~L~~~L~~~~~--~~-----~~e~i~~~~~~~qA~~ 429 (821)
T PTZ00014 357 GVLLLGNVEIEGKEEGGLTDAAAISDESLEVFNEACELLFLDYESLKKELTVKVT--YA-----GNQKIEGPWSKDESEM 429 (821)
T ss_pred HHHhhcceeEeccccCCCCCceeccCCCHHHHHHHHHHhCCCHHHHHHHhhceEE--Ee-----CCeeEecCCCHHHHHH
Confidence 999999999987654444567888764 48999999999999999999999999 77 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHH
Q psy18109 159 TRNSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLRE 238 (602)
Q Consensus 159 ~RDaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~ 238 (602)
+||||||+||+|||+|||.+||.+|.+... ...+||||||||||+|+ .|||||||||||||||||+|++++|+.
T Consensus 430 ~rdalaK~lY~rLF~wiV~~IN~~l~~~~~-~~~~IGiLDI~GFE~f~-----~NSfEQLcINy~NEkLQq~F~~~vF~~ 503 (821)
T PTZ00014 430 LKDSLSKAVYEKLFLWIIRNLNATIEPPGG-FKVFIGMLDIFGFEVFK-----NNSLEQLFINITNEMLQKNFVDIVFER 503 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCceEEEEecccccccC-----cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999986543 45799999999999999 999999999999999999999999999
Q ss_pred HHHHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccCC
Q psy18109 239 EQEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLST 313 (602)
Q Consensus 239 eqeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~~ 313 (602)
||+||++|||+|++|+|.||++||||||++|.|||++||||| ||++|++||++.+++|++|.+++.
T Consensus 504 EqeeY~~EgI~~~~i~f~dN~~~idLie~k~~GIl~lLDEec~~p~~tD~~f~~kl~~~~~~~~~f~~~~~--------- 574 (821)
T PTZ00014 504 ESKLYKDEGISTEELEYTSNESVIDLLCGKGKSVLSILEDQCLAPGGTDEKFVSSCNTNLKNNPKYKPAKV--------- 574 (821)
T ss_pred HHHHHHHccccCCCCCCCCcHHHHHHHhcCCccHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCCCccCCCC---------
Confidence 999999999999999999999999999999999999999999 999999999999999999966521
Q ss_pred CCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC------CCCCCccchhh
Q psy18109 314 PSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET------RVPEAQPTRFR 387 (602)
Q Consensus 314 ~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~------~r~~Tv~s~fk 387 (602)
..+..|+|+||||+|+|+++||++||+|.|+++++++|++|++++|+.||+... ++++|++++||
T Consensus 575 ---------~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~k~~tv~s~Fk 645 (821)
T PTZ00014 575 ---------DSNKNFVIKHTIGDIQYCASGFLFKNKDVLRPELVEVVKASPNPLVRDLFEGVEVEKGKLAKGQLIGSQFL 645 (821)
T ss_pred ---------CCCCceEEEEeceeeeeccCcHHHhccccchHHHHHHHHhCccHHHHHHhcccccccccccCCCcHHHHHH
Confidence 135689999999999999999999999999999999999999999999997642 45789999999
Q ss_pred ccccC------CCCceeEEEecccCCCCCCCCcc------------------------------------ccccccC---
Q psy18109 388 ISILG------SSTLKYSILKVCPNIVDRPSMDE------------------------------------IKLCCRG--- 422 (602)
Q Consensus 388 ~sl~~------~t~phy~IRCIKPN~~k~p~~fd------------------------------------yk~L~~g--- 422 (602)
.||.. +|+||| |||||||+.|+|+.|| |++|++.
T Consensus 646 ~qL~~Lm~~L~~t~phf-IRCIKPN~~k~p~~fd~~~V~~QLr~~GvLE~iri~r~Gyp~R~~f~~F~~rY~~L~~~~~~ 724 (821)
T PTZ00014 646 NQLDSLMSLINSTEPHF-IRCIKPNENKKPLDWNSSKVLIQLHSLSILEALQLRQLGFSYRRTFAEFLSQFKYLDLAVSN 724 (821)
T ss_pred HHHHHHHHHHhccCCeE-EEEeCcCcccCccccchHhHHHHhhhhhHHHHHHHHhcCCcccccHHHHHHHHHhcCccccc
Confidence 99988 999999 9999999999999999 7777651
Q ss_pred -----------------Cc-------cc--------chhhHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 423 -----------------SV-------DV--------SVFELEEFRRDRL---VDLAVLIQKVWRGYHQRKDFLKRKRSQI 467 (602)
Q Consensus 423 -----------------gv-------~~--------tlf~LE~~R~~~l---~~~A~~IQk~~Rg~~aRk~y~k~r~aai 467 (602)
++ ++ .+..||+.|+.++ ..+++.||++||||++|++|++++.+++
T Consensus 725 ~~~~d~k~~~~~il~~~~l~~~~~~iGkTKVFlr~~~~~~Le~~~~~~~~~~~~~~~~iq~~~r~~~~r~~~~~~~~~~~ 804 (821)
T PTZ00014 725 DSSLDPKEKAEKLLERSGLPKDSYAIGKTMVFLKKDAAKELTQIQREKLAAWEPLVSVLEALILKIKKKRKVRKNIKSLV 804 (821)
T ss_pred CCCCCHHHHHHHHHHHcCCCcccEEecCCeEEEcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11 2446888877775 4689999999999999999999999999
Q ss_pred HHHHHHHhhhhhhh
Q psy18109 468 IIASAWRSWRFVPI 481 (602)
Q Consensus 468 ~IQ~~~R~~~~r~r 481 (602)
.||++||+|+.+++
T Consensus 805 ~iQ~~~R~~l~~~~ 818 (821)
T PTZ00014 805 RIQAHLRRHLVIAE 818 (821)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988765
No 5
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=100.00 E-value=2.7e-100 Score=866.08 Aligned_cols=403 Identities=32% Similarity=0.513 Sum_probs=364.2
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|++++++++|+| .++++|+||+++++. .++++||+++|++++.||+.|||+++|+..||+|||
T Consensus 192 qLl~g~~~~~~~~l~L-~~~~~y~yL~~~~~~------------~~~~~dD~~~f~~~~~al~~lG~~~~e~~~i~~ila 258 (671)
T cd01381 192 CMLAGLSTDEKERLKL-GEASDYHYLAQGGCI------------TCEGRDDAKDFADIRSAMKVLMFTDQEIWEIFKLLA 258 (671)
T ss_pred HHHcCCCHHHHHHcCC-CChhhceeecCCCCc------------cCCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7999999999999999 678999999999886 778999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|.+.+.. +.+.|.|.+.+.++.+|+||||++++|.++||+|++ .+ ++|.+.++++++||..+|
T Consensus 259 aILhLGni~F~~~~~~-~~~~~~i~~~~~l~~~a~LLgv~~~~L~~~lt~~~~--~~-----~~e~i~~~~~~~qA~~~r 330 (671)
T cd01381 259 AILHIGNLRFEATEVD-NLAACEVDDTPNLQRVAQLLGVPIQDLMDALTSRTI--FT-----RGETVVTPLSREQAVDVR 330 (671)
T ss_pred HHHhhcceEEeeccCC-CCCceeeCChHHHHHHHHHhCCCHHHHhhhhceEEE--Ee-----CCceEEecCCHHHHHHHH
Confidence 9999999999986433 236799999999999999999999999999999999 77 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||+|||+|||.+||++|..+......+||||||||||+|+ .|||||||||||||||||+|++++|+.||
T Consensus 331 dalak~lY~~lF~wiV~~IN~~l~~~~~~~~~~IgiLDIfGFE~f~-----~NsfEQLcINy~NEkLQ~~f~~~vf~~eq 405 (671)
T cd01381 331 DAFVKGIYGRLFVWIVRKINAAIYKPVQQSRNSIGVLDIFGFENFD-----VNSFEQLCINFANENLQQFFVQHIFKLEQ 405 (671)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccccccceEEEEecCCcccCC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999986544456799999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccCCCC
Q psy18109 241 EEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLSTPS 315 (602)
Q Consensus 241 eeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~~~~ 315 (602)
+||++|||+|++|+|.||++|||||+++|.|||++||||| ||++|++|+++.+++|++|..++.
T Consensus 406 ~eY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLDee~~~p~~td~~f~~kl~~~~~~~~~~~~~~~----------- 474 (671)
T cd01381 406 EEYNLEHINWQHIEFVDNQDALDLIAIKPLNIMSLIDEESKFPKGTDQTMLEKLHSQHGLHSNYLKPKS----------- 474 (671)
T ss_pred HHHHHcCCCCCccCccCcHHHHHHHhcCCCCcceechHhhcCCCCCHHHHHHHHHHHhcCCCCcccCCC-----------
Confidence 9999999999999999999999999999999999999999 999999999999999999965521
Q ss_pred CCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC-------CCCCCccchhhc
Q psy18109 316 SAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET-------RVPEAQPTRFRI 388 (602)
Q Consensus 316 ~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~-------~r~~Tv~s~fk~ 388 (602)
..+..|+|+||||+|+|+++||++||+|.++++++++|++|+|++|+.||+... ++++||+++||.
T Consensus 475 -------~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~~k~~tv~~~fk~ 547 (671)
T cd01381 475 -------TQETQFGINHFAGVVFYDTRGFLEKNRDTFSGDLSQLVQSSKNKFLKQIFQADVEMGAETRKKKPTLSSQFRR 547 (671)
T ss_pred -------CCCCceEEEEecceEeeccCCHHHhccchhhHHHHHHHHhChHHHHHHHhcccccccccccccCCcHHHHHHH
Confidence 235789999999999999999999999999999999999999999999997532 678899999999
Q ss_pred cccC------CCCceeEEEecccCCCCCCCCccccccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 389 SILG------SSTLKYSILKVCPNIVDRPSMDEIKLCCRGSVDVSVFELEEFRRDRLVDLAVLIQKVWRGYHQRKDFLKR 462 (602)
Q Consensus 389 sl~~------~t~phy~IRCIKPN~~k~p~~fdyk~L~~ggv~~tlf~LE~~R~~~l~~~A~~IQk~~Rg~~aRk~y~k~ 462 (602)
||.. +|+||| |||||||+.|+|+.||-.++. +++|..-+-+ .|+-.--||..|..|...
T Consensus 548 qL~~L~~~L~~t~phf-IRCIKPN~~k~~~~fd~~~V~-----------~QLr~~Gvle---~iri~r~Gyp~r~~~~~F 612 (671)
T cd01381 548 SLDLLMRTLSSCQPFF-IRCIKPNEYKEPMVFDRELCV-----------RQLRYSGMME---TIRIRRAGYPIRHTFREF 612 (671)
T ss_pred HHHHHHHHHhcCCCeE-EEEeCcchhhccCccChHHHH-----------HHHHhcchHH---HHHHHHcCcCceecHHHH
Confidence 9987 999999 999999999999999965442 2222222222 233333488888887764
No 6
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=100.00 E-value=3.4e-100 Score=864.66 Aligned_cols=365 Identities=32% Similarity=0.568 Sum_probs=341.1
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+| +++++++|+| .++++|+||+++++. .++++||+++|+++++||+.|||+++|+.+||+|||
T Consensus 198 qLl~g-~~~~~~~l~L-~~~~~y~yL~~~~~~------------~~~~~~D~~~f~~~~~al~~lG~~~~e~~~I~~iLa 263 (674)
T cd01384 198 QLCAA-PPEDVKKYKL-GDPKEFHYLNQSNCF------------ELDGVDDAEEYLATRRAMDVVGISEEEQDAIFRVVA 263 (674)
T ss_pred HHHcC-CHHHHHHcCC-CChHhCccccCCCCc------------cccccchHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 78999 8999999999 789999999999986 778999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecC---hHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSN---DYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEAT 157 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~---~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~ 157 (602)
||||||||+|.+.+. .+.+.+.+ .+.++.+|+||||++++|.++|++|++ .+ ++|.+.++++++||.
T Consensus 264 aILhLGni~F~~~~~---~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~L~~~~~--~~-----~~e~i~~~~~~~~a~ 333 (674)
T cd01384 264 AILHLGNIEFAKGEE---IDSSVLKDEKSEFHLKTAAELLMCDEKALEDALCKRVM--VT-----PEEVITKPLDPDSAE 333 (674)
T ss_pred HHHhccceeeeccCC---CCcccccCcccHHHHHHHHHHhCCCHHHHHHHhcccEE--Ee-----CCceEEecCCHHHHH
Confidence 999999999987542 24455544 578999999999999999999999999 78 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHH
Q psy18109 158 VTRNSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLR 237 (602)
Q Consensus 158 ~~RDaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~ 237 (602)
++||||||+||+|||+|||.+||++|.+.. ....+||||||||||+|+ .|||||||||||||||||+|++++|+
T Consensus 334 ~~rdalak~lY~~LF~wiV~~iN~~l~~~~-~~~~~IgiLDI~GFE~f~-----~NsfEQLcINyaNEkLQ~~f~~~if~ 407 (674)
T cd01384 334 LSRDALAKTIYSRLFDWLVNKINSSIGQDP-DSKSLIGVLDIYGFESFK-----TNSFEQFCINLTNEKLQQHFNQHVFK 407 (674)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCeEEEEEecccccccC-----cCCHHHHHhhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999998653 345799999999999999 99999999999999999999999999
Q ss_pred HHHHHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccC
Q psy18109 238 EEQEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLS 312 (602)
Q Consensus 238 ~eqeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~ 312 (602)
.||+||++|||+|++|+|.||++|+|||+++|.|||++||||| ||++|++||++.+++|++|..++.
T Consensus 408 ~eq~eY~~EgI~~~~i~~~DN~~~ldLie~~~~Gil~lLdee~~~p~~td~~f~~kl~~~~~~~~~~~~~~~-------- 479 (674)
T cd01384 408 MEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRFEKPKL-------- 479 (674)
T ss_pred HHHHHHHhcCCCCCcccCCChHHHHHHHhcCCccHHHHHHHHHcCCCCCHHHHHHHHHHHhcCCCCCCCCCC--------
Confidence 9999999999999999999999999999999999999999999 999999999999999999966521
Q ss_pred CCCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC------CCCCCccchh
Q psy18109 313 TPSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET------RVPEAQPTRF 386 (602)
Q Consensus 313 ~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~------~r~~Tv~s~f 386 (602)
.+..|+|+||||+|+|+++||++||+|.|+++++++|++|++++|+.||+... .+++||+++|
T Consensus 480 -----------~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~k~~tv~~~f 548 (674)
T cd01384 480 -----------SRTAFTIDHYAGDVTYQTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEETSKSSKFSSIGSRF 548 (674)
T ss_pred -----------CCCeeEEEEecceeeecCCCHHHhcCCcccHHHHHHHHhCchHHHHHHhcccccccccccccccHHHHH
Confidence 34689999999999999999999999999999999999999999999997643 4578999999
Q ss_pred hccccC------CCCceeEEEecccCCCCCCCCcc
Q psy18109 387 RISILG------SSTLKYSILKVCPNIVDRPSMDE 415 (602)
Q Consensus 387 k~sl~~------~t~phy~IRCIKPN~~k~p~~fd 415 (602)
|.||.. +|+||| |||||||+.|+|+.||
T Consensus 549 k~~L~~L~~~L~~t~~hf-IRCIKPN~~k~p~~fd 582 (674)
T cd01384 549 KQQLQSLMETLSTTEPHY-IRCIKPNNVLKPGIFE 582 (674)
T ss_pred HHHHHHHHHHHhccCCeE-EEEeCCCcccCCCccC
Confidence 999988 999999 9999999999999999
No 7
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=100.00 E-value=4.2e-99 Score=857.62 Aligned_cols=404 Identities=37% Similarity=0.582 Sum_probs=359.7
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|+++++|++|+| .++++|+||++++++ .++++||+++|+++++||++|||+++|+.+||+|||
T Consensus 195 qll~g~~~~~~~~l~L-~~~~~y~yL~~~~~~------------~~~~~~d~~~f~~~~~al~~lG~s~~e~~~i~~ila 261 (674)
T cd01378 195 QLLAGASEQLLRELGL-QKPEYYYYLNQSQCY------------TVDGIDDKKDFKETQNAMKVIGFSEDEQDEIFRIVA 261 (674)
T ss_pred HHHcCCCHHHHHHhCC-CChhhCeeecCCCcc------------CCCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7999999999999999 577999999999986 788999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|...+ .+.+.+.+++.++.+|+||||++++|.++|++|++ .+++.+ ++|.+.++++++||..+|
T Consensus 262 aILhLGni~f~~~~----~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~--~~~~~~-~~e~i~~~~~~~~a~~~r 334 (674)
T cd01378 262 AILHLGNVQFAENG----DGAAVISDKDVLDFAAYLLGVDPSELEKALTSRTI--ETGGGG-RGEVYDVPLNVEQAAYTR 334 (674)
T ss_pred HHHhhcceEEeccC----CCccccCChHHHHHHHHHcCCCHHHHHHHhcccEE--EeCCCC-CceeEEecCCHHHHHHHH
Confidence 99999999998743 34478999999999999999999999999999999 773211 349999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||+|||+|||.+||++|.+.......+||||||||||+|+ .|||||||||||||||||+|++++|+.||
T Consensus 335 dalak~lY~~lF~wiV~~IN~~l~~~~~~~~~~IgILDIfGFE~f~-----~NsfEQLcINyaNEkLQ~~f~~~~F~~eq 409 (674)
T cd01378 335 DALAKAIYSRLFDWLVSRINKALQVKSPGKNKVIGVLDIYGFEIFQ-----KNSFEQFCINYVNEKLQQIFIELTLKAEQ 409 (674)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccCcceEEEEecccccccc-----cccHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999997644556799999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccccChHHHHHHHhc-CcccccccccccC------CHHHHHHHHhhccCCCCCCcCCCCCCCCCccCC
Q psy18109 241 EEYRRENIEWCYVEFFNNSAICDIIET-NSHGILSLLDEES------SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLST 313 (602)
Q Consensus 241 eeY~~EGI~w~~i~~~dN~~~~dLie~-~~~GIl~lLDeec------tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~~ 313 (602)
++|++|||+|++|+|.||++|+|||++ +|.|||++||||| ||++|++||++.+++|+++..+
T Consensus 410 ~~Y~~EgI~~~~i~f~DN~~~ldLie~~~~~Gil~lLdee~~~p~~~tD~~~~~kl~~~~~~~~~~~~~----------- 478 (674)
T cd01378 410 EEYVREGIKWTPIEYFNNKIVCDLIEGKRPPGIFSILDDVCATPHEGTDQTFLEKLNKKFSSHPHSDHF----------- 478 (674)
T ss_pred HHHHhcCCCCCCcCcCChHHHHHHHhcCCCcchHHHHHHHHcCCCCCChHHHHHHHHHHhccCCCCCCC-----------
Confidence 999999999999999999999999999 8999999999999 8999999999999999876433
Q ss_pred CCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC-----CCCCCccchhhc
Q psy18109 314 PSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET-----RVPEAQPTRFRI 388 (602)
Q Consensus 314 ~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~-----~r~~Tv~s~fk~ 388 (602)
+..+..|+|+||||+|+|+++||++||+|.++++++++|++|++++|+.||++.. ++++||+++||.
T Consensus 479 --------~~~~~~F~I~HyAG~V~Y~~~gfleKNrD~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~~~tv~~~fk~ 550 (674)
T cd01378 479 --------SSGSDEFRIKHYAGDVTYSVEGFCDKNKDTLFKDLIELMQSSSNPFLRSLFPEKSDADSKKRPTTAGFKIKT 550 (674)
T ss_pred --------CCCCCcEEEEEeceeeeecCcCHHHhhcchhhHHHHHHHHhCchHHHHHHhcccccccccCCCCcHHHHHHH
Confidence 1246789999999999999999999999999999999999999999999998533 678899999999
Q ss_pred cccC------CCCceeEEEecccCCCCCCCCccccccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 389 SILG------SSTLKYSILKVCPNIVDRPSMDEIKLCCRGSVDVSVFELEEFRRDRLVDLAVLIQKVWRGYHQRKDFLKR 462 (602)
Q Consensus 389 sl~~------~t~phy~IRCIKPN~~k~p~~fdyk~L~~ggv~~tlf~LE~~R~~~l~~~A~~IQk~~Rg~~aRk~y~k~ 462 (602)
||.. +|+||| |||||||+.|+|+.||-.++. +++|..-+-. .|+-.--||..|..|...
T Consensus 551 qL~~Lm~~L~~t~phf-IRCIKPN~~k~p~~Fd~~~V~-----------~QLr~~GvLE---~iri~r~Gyp~R~~~~~F 615 (674)
T cd01378 551 SANALVETLMKCTPHY-IRCIKPNETKSPNDFDESRVL-----------HQVKYLGLLE---NVRVRRAGFAYRQTFDKF 615 (674)
T ss_pred HHHHHHHHHHccCCeE-EEEECCCccCCchhcCHHHHH-----------HHHHhcChHH---HHHHHhcCCCccccHHHH
Confidence 9988 999999 999999999999999954442 2222222222 222233488888777654
Q ss_pred H
Q psy18109 463 K 463 (602)
Q Consensus 463 r 463 (602)
.
T Consensus 616 ~ 616 (674)
T cd01378 616 L 616 (674)
T ss_pred H
Confidence 3
No 8
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=100.00 E-value=4e-99 Score=856.25 Aligned_cols=397 Identities=31% Similarity=0.489 Sum_probs=354.7
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|+++++|++|+| .++++|+||+++++. .++++||+++|++|+.||+.|||+++|+..||+|||
T Consensus 197 qLl~g~~~~~~~~l~L-~~~~~y~yL~~~~~~------------~~~~~dd~~~f~~~~~al~~lG~~~~e~~~I~~iLa 263 (677)
T cd01383 197 QLCAGAPPALKEKLNL-KSASEYKYLKQSCCY------------SINGVDDAQRFHTLVEALDIVHISKEDQENVFAMLA 263 (677)
T ss_pred HHHcCCCHHHHHHhCC-CCHHHCceecCCCcc------------cCCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7999999999999999 789999999999986 778999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|.+.++ .+.+.+.+.+.+..+|+||||++++|.++||++++ .+ ++|.+.++++++||..+|
T Consensus 264 aILhLGNi~F~~~~~---~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~--~~-----~~e~~~~~~~~~qa~~~r 333 (677)
T cd01383 264 AVLWLGNVSFTVIDN---ENHVEPVADEALSTAAKLIGCNIEDLMLALSTRKM--HV-----NNDNIVQKLTLQQAIDAR 333 (677)
T ss_pred HHHhhcceEEEecCC---CcccccCChHHHHHHHHHhCCCHHHHHHHhhhcEE--Ee-----CCceEeecCCHHHHHHHH
Confidence 999999999987532 23466778889999999999999999999999999 77 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||+|||+|||.+||.+|.+.......+||||||||||+|+ .|||||||||||||||||+|++++|+.||
T Consensus 334 dalak~lY~~lF~wiV~~IN~~l~~~~~~~~~~IgiLDI~GFE~f~-----~NsfEQLcINyaNEkLQ~~f~~~vF~~Eq 408 (677)
T cd01383 334 DALAKSIYASLFDWLVEQINKSLEVGKRRTGRSISILDIYGFESFD-----KNSFEQFCINYANERLQQHFNRHLFKLEQ 408 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccceEEEeeccccccCC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999997654445799999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccCCCC
Q psy18109 241 EEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLSTPS 315 (602)
Q Consensus 241 eeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~~~~ 315 (602)
+||++|||+|++|+|.||++|+|||+++|.|||++||||| ||++|++||++++++|++|.++
T Consensus 409 eeY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLdee~~~p~~tD~~f~~kl~~~~~~~~~~~~~------------- 475 (677)
T cd01383 409 EEYEEDGIDWTKVEFEDNQECLDLFEKKPLGLLSLLDEESTFPNATDLTFANKLKQHLKTNSCFRGE------------- 475 (677)
T ss_pred HHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHHcCCCCCHHHHHHHHHHHhCCCCCCCCC-------------
Confidence 9999999999999999999999999999999999999999 9999999999999999988543
Q ss_pred CCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCC-----------------CCC
Q psy18109 316 SAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEE-----------------TRV 378 (602)
Q Consensus 316 ~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~-----------------~~r 378 (602)
.+..|+|+||||+|+|+++||++||+|.|+++++++|++|++++++ +|... .++
T Consensus 476 --------~~~~F~I~HyAG~V~Y~v~gfleKNrD~l~~~~~~ll~~S~~~~~~-~f~~~~~~~s~~~~~~~~~~~~~~~ 546 (677)
T cd01383 476 --------RGGAFTVRHYAGEVTYDTTGFLEKNRDLLHSDSIQLLSSCKCQLPQ-LFASSMLIQSPVVGPLYVASAADSQ 546 (677)
T ss_pred --------CCCceEEEEeccceeecCCChHHhccccccHHHHHHHHhCchHHHH-HHHhhhhcccccccccccccccccc
Confidence 2467999999999999999999999999999999999999999876 44321 035
Q ss_pred CCCccchhhccccC------CCCceeEEEecccCCCCCCCCccccccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 379 PEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDEIKLCCRGSVDVSVFELEEFRRDRLVDLAVLIQKVWRG 452 (602)
Q Consensus 379 ~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fdyk~L~~ggv~~tlf~LE~~R~~~l~~~A~~IQk~~Rg 452 (602)
+.||+++||.||.. +|+||| |||||||+.|+|+.||-.++.. ++|..-+-. .|+-.--|
T Consensus 547 ~~tv~~~fk~qL~~L~~~L~~t~phf-IRCIKPN~~k~p~~fd~~~V~~-----------QLr~~GvlE---~iri~r~G 611 (677)
T cd01383 547 KLSVGTKFKGQLFKLMQQLENTTPHF-IRCIKPNNKQLPGIYEQGLVLQ-----------QLRCCGVLE---VVRISRSG 611 (677)
T ss_pred CcchHHHHHHHHHHHHHHHhCCCCeE-EEEECcccccCcCccchhhhHH-----------HhhhccHHH---HHHHHhcC
Confidence 78999999999988 999999 9999999999999999655432 222222222 23333348
Q ss_pred HHHHHHHHHH
Q psy18109 453 YHQRKDFLKR 462 (602)
Q Consensus 453 ~~aRk~y~k~ 462 (602)
|..|..|...
T Consensus 612 yp~R~~~~~F 621 (677)
T cd01383 612 YPTRMTHQEF 621 (677)
T ss_pred CCccccHHHH
Confidence 8888877654
No 9
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=100.00 E-value=2.2e-98 Score=853.89 Aligned_cols=401 Identities=31% Similarity=0.494 Sum_probs=356.6
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|++++++++|+|...+++|+||+++++ .++++||+++|++|+.||+.|||+++|+.+||+|||
T Consensus 207 qLl~G~~~~~~~~l~L~~~~~~y~yL~~~~~-------------~~~~~~d~~~f~~~~~al~~lG~~~~e~~~i~~iLa 273 (693)
T cd01377 207 QLLSGADPELKSMLLLTGNPNDYRYLSQGEL-------------TIPGVDDAEEFKLTDEAFDILGFSDEEKNSIFKIVA 273 (693)
T ss_pred HHHcCCCHHHHHHcCCCCchhcCeeeCCCCc-------------cCCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7999999999999999655599999999987 678999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|.+.. +.+.+.+.+++.+..+|+||||++++|.++||++++ .+ ++|.+.++++++||..+|
T Consensus 274 aILhLGni~F~~~~---~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~--~~-----~~e~i~~~~~~~~A~~~r 343 (693)
T cd01377 274 AILHLGNIKFKQRQ---REEQAELDGTEEADKAAHLLGVNSADLLKALLHPRI--KV-----GREWVTKGQNVEQVSFSV 343 (693)
T ss_pred HHHhhcceEEEecC---CCCccccCChHHHHHHHHHhCCCHHHHHHHhcceEE--EE-----CCeeEeeCCCHHHHHHHH
Confidence 99999999998753 235688999999999999999999999999999999 77 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||+|||+|||.+||.+|.+.. ....+||||||||||+|+ .|||||||||||||||||+|++++|+.||
T Consensus 344 Dalak~lY~~LF~wiV~~IN~~l~~~~-~~~~~IgiLDIfGFE~f~-----~NsfEQLcINyaNEkLQ~~f~~~vf~~eq 417 (693)
T cd01377 344 GALAKALYERLFLWLVKRINKTLDTKQ-QRAYFIGVLDIAGFEIFD-----FNSFEQLCINYTNEKLQQFFNHHMFVLEQ 417 (693)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCC-CCCceEEEEecccccccC-----CCCHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998753 345799999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccc-cChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccCCC
Q psy18109 241 EEYRRENIEWCYVEF-FNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLSTP 314 (602)
Q Consensus 241 eeY~~EGI~w~~i~~-~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~~~ 314 (602)
+||++|||+|++|+| .||++|+|||+++|.|||++||||| ||++|++|+++.+++|++|...
T Consensus 418 ~~Y~~EgI~~~~i~~~~dn~~~ldLie~~~~Gil~lLdee~~~~~~tD~~~~~kl~~~~~~~~~~~~~------------ 485 (693)
T cd01377 418 EEYQREGIEWTFIDFGLDLQPTIDLIEKNPMGILSLLDEECVFPKATDKTFVEKLYDNHLGKSKFKKP------------ 485 (693)
T ss_pred HHHHHhCCCCcccccCCCcHHHHHHHhcCCCchHhhhhHHhcCCCCCHHHHHHHHHHHhcCCCccccc------------
Confidence 999999999999999 5999999999999999999999999 9999999999999999887322
Q ss_pred CCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC----------------CC
Q psy18109 315 SSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET----------------RV 378 (602)
Q Consensus 315 ~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~----------------~r 378 (602)
.+...+..|+|+||||+|+|+++||++||+|.|+++++++|++|++++|+.||+... .+
T Consensus 486 -----~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~~~~~~~~~~ 560 (693)
T cd01377 486 -----KKGKAKAHFSLVHYAGTVDYNIDGWLEKNKDPLNDNVVGLLKKSSDKLVAELFKDYAEASGDGGGGGGKKKKGGS 560 (693)
T ss_pred -----CCCCCCCcEEEEeeceeEeeccccHHHhccccccHHHHHHHHhCchHHHHHHhhhhcccccccccccCCCCcCCc
Confidence 112346789999999999999999999999999999999999999999999997531 12
Q ss_pred CCCccchhhccccC------CCCceeEEEecccCCCCCCCCccccccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 379 PEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDEIKLCCRGSVDVSVFELEEFRRDRLVDLAVLIQKVWRG 452 (602)
Q Consensus 379 ~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fdyk~L~~ggv~~tlf~LE~~R~~~l~~~A~~IQk~~Rg 452 (602)
++||+++||.||.. +|+||| |||||||+.|+|+.||-+++. ++.|..-+-.++. | .--|
T Consensus 561 ~~tv~~~F~~qL~~L~~~L~~t~~hf-IRCIKPN~~k~p~~Fd~~~V~-----------~QLr~~GvlEtvr-i--rr~G 625 (693)
T cd01377 561 FRTVSQLYKEQLNKLMTTLRSTNPHF-VRCIIPNEEKKPGKLDAHLVL-----------DQLRCNGVLEGIR-I--CRKG 625 (693)
T ss_pred cccHHHHHHHHHHHHHHHHhccCCeE-EEEeCcCccCCCCccCHHHHH-----------HHHHhcchHHHHH-H--HHcC
Confidence 47999999999988 999999 999999999999999965542 2222222222211 2 2238
Q ss_pred HHHHHHHHHH
Q psy18109 453 YHQRKDFLKR 462 (602)
Q Consensus 453 ~~aRk~y~k~ 462 (602)
|..|..|...
T Consensus 626 yp~R~~f~~F 635 (693)
T cd01377 626 FPNRILYAEF 635 (693)
T ss_pred CCccccHHHH
Confidence 8888777654
No 10
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=100.00 E-value=1.6e-98 Score=852.39 Aligned_cols=400 Identities=29% Similarity=0.467 Sum_probs=358.5
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|+++++|++|+| .++++|+||+++++. .+++.+|+++|++|+.||++|||+++|+..||+|||
T Consensus 193 qll~g~~~~~~~~~~L-~~~~~y~yL~~~~~~------------~~~~~~d~~~f~~~~~al~~lg~~~~e~~~i~~iLa 259 (677)
T cd01387 193 ELLAGLPAQLRQAFSL-QEAETYYYLNQGGNC------------EIAGKSDADDFRRLLAAMEVLGFSSEDQDSIFRILA 259 (677)
T ss_pred HHHhCCCHHHHHHhcC-CCHHhCchhcCCCcc------------cCCCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7999999999999999 689999999999875 667899999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|..... ++.+.+.+.+++.+..+|+||||++++|.++||++++ .+ ++|.+.++++++||..+|
T Consensus 260 aILhLGni~F~~~~~-~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~lt~~~~--~~-----~~e~i~~~~~~~~a~~~r 331 (677)
T cd01387 260 SILHLGNVYFEKRET-DAQEVASVVSAREIQAVAELLQISPEGLQKAITFKVT--ET-----RREKIFTPLTVESAVDAR 331 (677)
T ss_pred HHHhhcCeEEeeccC-CCCcccccCCHHHHHHHHHHhCCCHHHHHHHhccCeE--Ee-----CCceEeccCCHHHHHHHH
Confidence 999999999987542 3446688999999999999999999999999999999 77 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||+|||+|||++||.+|.+.. ...+||||||||||+|+ .|||||||||||||||||+|++++|+.||
T Consensus 332 dalak~lY~~lF~wiV~~iN~~l~~~~--~~~~IgILDIfGFE~f~-----~NsfEQLcINyaNEkLQ~~f~~~vF~~eq 404 (677)
T cd01387 332 DAIAKVLYALLFNWLITRVNALVSPTQ--DTLSIAILDIYGFEDLS-----FNSFEQLCINYANENLQYLFNKIVFQEEQ 404 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCC--CCceEEEEecCccccCC-----CCCHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998643 34699999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccCCCC
Q psy18109 241 EEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLSTPS 315 (602)
Q Consensus 241 eeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~~~~ 315 (602)
+||.+|||+|++|+|.||++|+|||+++|.|||++||||| +|++|++|++..+++|+.|.+++.
T Consensus 405 ~eY~~EgI~~~~i~f~dN~~~ldLi~~kp~Gil~lLdee~~~p~~td~~~~~kl~~~~~~~~~~~~~~~----------- 473 (677)
T cd01387 405 EEYIREQLDWTEIAFADNQPVINLISLKPYGILRILDDQCCFPQATDHTFLQKCHYHHGANPLYSKPKM----------- 473 (677)
T ss_pred HHHHhcCCCCcccCcCChHHHHHHHhcCCCchHHHHHHHhcCCCCchHHHHHHHHHhccCCccccCCCC-----------
Confidence 9999999999999999999999999999999999999999 999999999999999998865421
Q ss_pred CCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC-----------------CC
Q psy18109 316 SAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET-----------------RV 378 (602)
Q Consensus 316 ~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~-----------------~r 378 (602)
+...|+|+||||+|+|+++||++||+|.++++++++|++|++++|+.||+... ++
T Consensus 474 --------~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~~~s~~~~~~~ 545 (677)
T cd01387 474 --------PLPEFTIKHYAGKVTYQVHKFLDKNHDQVRQDVLDLFVSSRTRVVAHLFSSHAAQRAPKRLGKSSSGTRLYK 545 (677)
T ss_pred --------CCCeeEEEEeCceeeecCCChHHhccchhhHHHHHHHHhCCcHHHHHHHhhhhcccccccccCCCccccccC
Confidence 34689999999999999999999999999999999999999999999996421 24
Q ss_pred CCCccchhhccccC------CCCceeEEEecccCCCCCCCCccccccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 379 PEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDEIKLCCRGSVDVSVFELEEFRRDRLVDLAVLIQKVWRG 452 (602)
Q Consensus 379 ~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fdyk~L~~ggv~~tlf~LE~~R~~~l~~~A~~IQk~~Rg 452 (602)
++||+++||.||.. +|+||| |||||||+.|+|+.||-+++. +++|..-+-. .|+-.--|
T Consensus 546 ~~tv~~~f~~sL~~L~~~l~~t~phf-IRCIKPN~~k~~~~Fd~~~V~-----------~QLr~~GvlE---~vri~r~G 610 (677)
T cd01387 546 AHTVAAKFQQSLLDLVEKMERCNPLF-VRCLKPNHKKEPGLFEPDVVM-----------AQLRYSGVLE---TVRIRKEG 610 (677)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCeE-EEEECCCCcCCccccChHHHH-----------HHHHHhchHH---HHHHHHcc
Confidence 67999999999987 999999 999999999999999965542 2222222222 23333348
Q ss_pred HHHHHHHHHH
Q psy18109 453 YHQRKDFLKR 462 (602)
Q Consensus 453 ~~aRk~y~k~ 462 (602)
|..|..|...
T Consensus 611 yp~r~~~~~F 620 (677)
T cd01387 611 FPVRLPFQHF 620 (677)
T ss_pred CCccccHHHH
Confidence 8888777655
No 11
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=100.00 E-value=2.3e-98 Score=852.82 Aligned_cols=403 Identities=27% Similarity=0.405 Sum_probs=358.7
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|+++++|++|+| .++++|+||+++++. ..+++||+++|++|++||++|||+++|+..||+|||
T Consensus 203 qll~G~~~~~~~~~~l-~~~~~y~yL~~~~~~------------~~~~~dd~~~f~~~~~al~~lG~~~~~~~~i~~iLa 269 (692)
T cd01385 203 YLLLGASEEERKQEFL-LKQPDYFYLNQHNLK------------IEDGEDEKHEFERLKQAMEMVGFLAATQKQIFAVLS 269 (692)
T ss_pred HHHcCCCHHHHHHhcC-CChhcCCeeCCCCCc------------cCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7999999999999999 566799999999874 456899999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|.+....++.+.+.+.+++.+..+|.||||++++|.++||++++ .+ ++|.+.++++++||..+|
T Consensus 270 aILhLGni~F~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~--~~-----~~e~i~~~~~~~qa~~~r 342 (692)
T cd01385 270 AVLLLGNVTYKKRATYHRDESLEVGNPEVVDLLSQLLKVKRETLMEALTKKRT--VT-----VNETLILPYSLSEAITAR 342 (692)
T ss_pred HHHhccCceeeecccCCCCCceecCCHHHHHHHHHHhCCCHHHHHHHhccCeE--Ee-----CCCeEEecCCHHHHHHHH
Confidence 99999999998754333456788999999999999999999999999999999 77 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCC--CCceeeeeeeccccccccCCCCCC-CchhhhhhhhhhhHHHHHHHHHhHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPS--GKRKVLGILDIYGFEAYDGKCGSS-NGFEQFIINFCNEKLHQLFTDVMLR 237 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~--~~~~~IgILDI~GFE~f~~~~~~~-NsFEQlcINy~NEkLQq~f~~~~f~ 237 (602)
|||||+||+|||+|||++||.+|.+... ....+||||||||||+|+ . |||||||||||||||||+|++++|+
T Consensus 343 dalak~lY~~LF~wiV~~IN~~l~~~~~~~~~~~~IgiLDI~GFE~f~-----~~NsfEQLcINyaNEkLQ~~f~~~vf~ 417 (692)
T cd01385 343 DAMAKCLYSALFDWIVLRINHALLNKDDVAVSGLSIGVLDIFGFEDFG-----RCNSFEQLCINYANEQLQYYFNQHIFK 417 (692)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEEecCccccCC-----CCCCHHHHhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999986543 245799999999999999 8 9999999999999999999999999
Q ss_pred HHHHHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccC
Q psy18109 238 EEQEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLS 312 (602)
Q Consensus 238 ~eqeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~ 312 (602)
.||++|++|||+|++|+|.||++|+|||+++|.|||++||||| ||++|++|+++.+++|++|.+++.
T Consensus 418 ~eq~~Y~~EgI~~~~i~f~dN~~~ldLie~k~~Gil~lLdee~~~p~~td~~~l~kl~~~~~~~~~~~~~~~-------- 489 (692)
T cd01385 418 LEQEEYQGEGITWTNIEYTDNVGCIQLFSKKPTGLLYLLDEESNFPHATSQTLLAKFNQQHKDNKYYEGPQV-------- 489 (692)
T ss_pred HHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHhcCCCCCHHHHHHHHHHHhCCCCCccCCCC--------
Confidence 9999999999999999999999999999999999999999999 999999999999999998865521
Q ss_pred CCCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC---------------C
Q psy18109 313 TPSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET---------------R 377 (602)
Q Consensus 313 ~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~---------------~ 377 (602)
....|+|+||||+|+|+++||++||+|.|+++++++|++|++++|+.||+... .
T Consensus 490 -----------~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~~~~~~~~~~ 558 (692)
T cd01385 490 -----------KEPAFIIQHYAGKVKYQIKDFREKNMDLMRQDIVALLKGSDSSYVRELIGMDPVAVFRWAVLRAAFRAM 558 (692)
T ss_pred -----------CCCeEEEEEecceeeecCCCHHHhccccccHHHHHHHHhCccHHHHHHhccCcccccccccccccccCc
Confidence 34679999999999999999999999999999999999999999999997532 2
Q ss_pred CCCCccchhhccccC------CCCceeEEEecccCCCCCCCCccccccccCCcccchhhHHHHHHHHHHHHHHHHHHHHH
Q psy18109 378 VPEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDEIKLCCRGSVDVSVFELEEFRRDRLVDLAVLIQKVWR 451 (602)
Q Consensus 378 r~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fdyk~L~~ggv~~tlf~LE~~R~~~l~~~A~~IQk~~R 451 (602)
++.||+++||.||.+ +|+||| |||||||+.|+|+.||-+.+. ++.|..-+-. .|+-.--
T Consensus 559 ~~~tV~~~f~~~L~~L~~~L~~t~~hf-IRCIKPN~~k~p~~Fd~~~V~-----------~QLr~~GvlE---~irirr~ 623 (692)
T cd01385 559 AAPSVSAQFQTSLNKLMETLGKAEPFF-IRCIKSNAEKIENCFDDELVL-----------RQLRYTGMLE---TVRIRRA 623 (692)
T ss_pred cCCcHHHHHHHHHHHHHHHHhccCCeE-EEEeCCCCccCcCccCHHHHH-----------HHHHhhchHH---HHHHHhc
Confidence 347999999999987 999999 999999999999999965442 2222222222 2333334
Q ss_pred HHHHHHHHHHH
Q psy18109 452 GYHQRKDFLKR 462 (602)
Q Consensus 452 g~~aRk~y~k~ 462 (602)
||..|..|...
T Consensus 624 Gyp~R~~~~~F 634 (692)
T cd01385 624 GYSVRYTYQDF 634 (692)
T ss_pred cCCccccHHHH
Confidence 88877777654
No 12
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=100.00 E-value=3.9e-98 Score=851.72 Aligned_cols=398 Identities=32% Similarity=0.528 Sum_probs=353.5
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|+++++|++|+| .++++|+||+++++. .++++||+++|++|++||++|||+++|+.+||+|||
T Consensus 198 qLl~g~~~~~~~~l~L-~~~~~y~yl~~~~~~------------~~~~~~d~~~f~~~~~al~~lg~s~~e~~~I~~iLa 264 (691)
T cd01380 198 QLCAGAPSQELKELHL-GHADKFNYLNQGGAP------------TIEGVDDAEDFNATVQALTLLGISEEQQMDIFKLLA 264 (691)
T ss_pred HHHhCCCHHHHHHhCC-CCHHHCccccCCCCc------------cCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7999999999999999 678999999999985 778999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceee-cChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTV-SNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVT 159 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i-~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~ 159 (602)
||||||||+|.+.++ +.+.+ .+.+.++.+|+||||++++|.++||+|++ .+ ++|.+.++++++||..+
T Consensus 265 aILhLGni~F~~~~~----~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~--~~-----~~e~i~~~~~~~qA~~~ 333 (691)
T cd01380 265 ALLHLGNIEIEATRN----DSSSISPKDENLQIACELLGVDASDLRKWLVKRQI--VT-----RSEKIVKPLTKEQAIVA 333 (691)
T ss_pred HHHhccceeeeccCC----ccceecCChHHHHHHHHHhCCCHHHHHHHHHhCEE--EE-----CCeeEEecCCHHHHHHH
Confidence 999999999998532 33334 46678999999999999999999999999 87 89999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccCC--CCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHH
Q psy18109 160 RNSLCKALYSRLFTYIVNRTNKAVKVKP--SGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLR 237 (602)
Q Consensus 160 RDaLaK~LY~rLF~wiV~~IN~~l~~~~--~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~ 237 (602)
||||||+||+|||+|||++||++|.+.. .....+||||||||||+|+ .|||||||||||||||||+|++++|+
T Consensus 334 rdalak~lY~~LF~wiV~~iN~~l~~~~~~~~~~~~IgiLDI~GFE~f~-----~NsfEQLcINyaNEkLQ~~f~~~iF~ 408 (691)
T cd01380 334 RDALAKHIYSKLFDWIVDVINKSLNTGEVKKKQTSFIGVLDIYGFETFE-----KNSFEQFCINYANEKLQQQFNQHVFK 408 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcCcccCCccceEEEEecCcccccC-----CCCHHHHhhhhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999763 3345799999999999999 99999999999999999999999999
Q ss_pred HHHHHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccC--CCCCCcCCCCCCCCCc
Q psy18109 238 EEQEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSS--SLTPERGRGGVRTPGV 310 (602)
Q Consensus 238 ~eqeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~--~~~~~~~~~~~~~p~~ 310 (602)
.||++|++|||+|++|+|.||++|+|||++ |.|||++||||| ||++|++||++.++ +|++|..++.
T Consensus 409 ~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~-~~Gil~lLdee~~~p~~td~~f~~kl~~~~~~~~~~~~~~~~~------ 481 (691)
T cd01380 409 LEQEEYLKEGIEWTFIDFYDNQPCIDLIES-KLGILSLLDEECRLPKGSDESWAQKLYNKLPKKKNPHFEKPRF------ 481 (691)
T ss_pred HHHHHHHhcCCCCccccCCCCHHHHHHHhC-CCchHHHhHHhhcCCCCChHHHHHHHHHHhcccCCCCccCCCC------
Confidence 999999999999999999999999999998 589999999999 99999999999998 8888866521
Q ss_pred cCCCCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC--------------
Q psy18109 311 LSTPSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET-------------- 376 (602)
Q Consensus 311 ~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~-------------- 376 (602)
....|+|+||||+|+|+++||++||+|.|+++++++|++|++++|+.||+...
T Consensus 482 -------------~~~~F~I~HyAG~V~Y~v~gfleKNrD~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~~~~~~ 548 (691)
T cd01380 482 -------------GQTSFTVKHFADDVEYDVDGFLEKNRDTVSDEHLDVLKASKNPFLKEVLDAAELASSSSSSAKSKPA 548 (691)
T ss_pred -------------CCCeeEEEEccCCcccccccHHHhccccccHHHHHHHHhCccHHHHHHhhhhccccccccccccccc
Confidence 35689999999999999999999999999999999999999999999996421
Q ss_pred ---------CCCCCccchhhccccC------CCCceeEEEecccCCCCCCCCccccccccCCcccchhhHHHHHHHHHHH
Q psy18109 377 ---------RVPEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDEIKLCCRGSVDVSVFELEEFRRDRLVD 441 (602)
Q Consensus 377 ---------~r~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fdyk~L~~ggv~~tlf~LE~~R~~~l~~ 441 (602)
++++||+++||.||.. +|+||| |||||||+.|+|+.||-.++. ++.|..-+-.
T Consensus 549 ~~~~~~~~~~~~~tv~~~fk~qL~~L~~~L~~t~phf-IRCIKPN~~k~~~~fd~~~V~-----------~QLr~~GvlE 616 (691)
T cd01380 549 AKRPPKRAKQHKPTVGSQFKSSLIELMSTLNSTNPHY-IRCIKPNDEKKPFKFEPKRVL-----------QQLRACGVLE 616 (691)
T ss_pred ccccccccccCCCcHHHHHHHHHHHHHHHHhccCCeE-EEEeCCCcccCcCccCHHHHH-----------HHHHHhchHH
Confidence 3467999999999988 999999 999999999999999965542 2223222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy18109 442 LAVLIQKVWRGYHQRKDFLKR 462 (602)
Q Consensus 442 ~A~~IQk~~Rg~~aRk~y~k~ 462 (602)
.|+-.--||..|..|...
T Consensus 617 ---~iri~r~Gyp~R~~~~~F 634 (691)
T cd01380 617 ---TIRISAAGFPSRWTYEEF 634 (691)
T ss_pred ---HHHHHhccCCccccHHHH
Confidence 222223488888777654
No 13
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=100.00 E-value=2.2e-97 Score=847.51 Aligned_cols=425 Identities=29% Similarity=0.432 Sum_probs=357.5
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccc-------cCCCCCCC-------CCCCCCcchHHHHHHHHHHHHHcC
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNH-------ISSSPMFS-------PATSPHLDDKACFLRTRKACEALG 66 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~-------~~~~~~~~-------~~~~~~~dD~~~f~~~~~Am~~lG 66 (602)
|||+|++++++++|+| .++++|+||+++..... ....+..+ +...+++||+++|++|+.||++||
T Consensus 197 qLl~G~~~~~~~~l~L-~~~~~y~yL~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~dD~~~f~~~~~Al~~lg 275 (717)
T cd01382 197 RLCAGASEDIREKLHL-SSPDDFRYLNRGCTRYFANKETDKQILQNRKSPEHLKKGALKDPLLDDYGDFQRMCVALKKIG 275 (717)
T ss_pred HHHhCCCHHHHHHhcC-CChhhCeeecCCcccccccccccccccccccccccccccccCCCCCcHHHHHHHHHHHHHHcC
Confidence 7999999999999999 68999999998743100 00011111 124578999999999999999999
Q ss_pred CCchhhHHHHHHHHHHHhhcceeeEeccCCCCCCceeec--ChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCC
Q psy18109 67 FTPDEILDIFKVVASVLKLGNVVFIPSNNIDGTEGCTVS--NDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGS 144 (602)
Q Consensus 67 fs~~e~~~I~~ilAaILhLGNi~F~~~~~~~~~~~~~i~--~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~ 144 (602)
|+++|+..||+|||||||||||+|.+.+.. .+.|.+. +.+.+..+|+||||++++|.++||+|++ .++.++.++
T Consensus 276 ~s~~e~~~i~~iLaaILhLGni~F~~~~~~--~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~r~~--~~~~g~~~~ 351 (717)
T cd01382 276 LDDTEKLDLFRVVAGVLHLGNIDFEEAGST--SGGCNVKNQSEQSLEYCAELLGLDQDDLRVSLTTRVM--LTTAGGAKG 351 (717)
T ss_pred CCHHHHHHHHHHHHHHHhcCceeEeccCCC--CCcceecCCCHHHHHHHHHHcCCCHHHHHHHHhheEE--ecccccCCC
Confidence 999999999999999999999999875422 2455554 5678999999999999999999999998 643334589
Q ss_pred ceEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhh
Q psy18109 145 TLIVTELSAGEATVTRNSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCN 224 (602)
Q Consensus 145 e~i~~~l~~~qA~~~RDaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~N 224 (602)
|.+.++++++||..+||||||+||+|||+|||++||.+|.... ...+||||||||||+|+ .||||||||||||
T Consensus 352 ~~i~~~l~~~qA~~~rdalak~lY~~LF~wiV~~IN~~l~~~~--~~~~IgiLDIfGFE~f~-----~NsfEQLcINyaN 424 (717)
T cd01382 352 TVIKVPLKVEQANNARDALAKAVYSHLFDHVVSRVNQCFPFET--SSNFIGVLDIAGFEYFE-----HNSFEQFCINYCN 424 (717)
T ss_pred ceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCcEEEEEeccccccCC-----CCCHHHHhhhhhH
Confidence 9999999999999999999999999999999999999997543 34689999999999999 9999999999999
Q ss_pred hHHHHHHHHHhHHHHHHHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCC
Q psy18109 225 EKLHQLFTDVMLREEQEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPE 299 (602)
Q Consensus 225 EkLQq~f~~~~f~~eqeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~ 299 (602)
|||||+|++++|+.||++|++|||+|++|+|+||++|+|||+++|.|||++||||| ||++|++||++.+++|++|
T Consensus 425 EkLQ~~f~~~if~~Eq~~Y~~EgI~~~~i~~~DN~~~ldLie~k~~Gil~lLDee~~~p~~tD~~f~~kl~~~~~~~~~~ 504 (717)
T cd01382 425 EKLQQFFNERILKEEQELYQREGLGVNEVHYVDNQDCIDLIEAKLNGILDILDEENRLPQPSDQHFTSVVHQKHKDHFRL 504 (717)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccccccccHHHHHHHhcCCccHHHHhHHHhcCCCCCHHHHHHHHHHHhcCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999 9999999999999999888
Q ss_pred cCCCCCCCCCccCCCCCCCCCC-CCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC--
Q psy18109 300 RGRGGVRTPGVLSTPSSAGGDN-SLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET-- 376 (602)
Q Consensus 300 ~~~~~~~~p~~~~~~~~~~~~~-~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~-- 376 (602)
..++... ....+ ...+..|+|+||||+|+|+++||++||+|.|++++.++|++|++++|+.||+...
T Consensus 505 ~~~~~~~----------~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKNkD~l~~~~~~ll~~S~n~~i~~lf~~~~~~ 574 (717)
T cd01382 505 TIPRKSK----------LAVHRNLRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESKDKFLRSLFESSTNN 574 (717)
T ss_pred cCCCccc----------cccccccCCCCCEEEEecceeEeecCCChHHhcCccccHHHHHHHHhCchHHHHHHhcccccc
Confidence 6553210 11111 1134679999999999999999999999999999999999999999999997543
Q ss_pred ---------CCCCCccchhhccccC------CCCceeEEEecccCCCCCCCCccccccccCCcccchhhHHHHHHHHHHH
Q psy18109 377 ---------RVPEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDEIKLCCRGSVDVSVFELEEFRRDRLVD 441 (602)
Q Consensus 377 ---------~r~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fdyk~L~~ggv~~tlf~LE~~R~~~l~~ 441 (602)
.++.||+++||.||.. +|+||| |||||||+.|+|+.||-.++. +++|..-+-+
T Consensus 575 ~~~~~~~~k~~~~tv~~~fk~qL~~Lm~~L~~t~~hf-IRCIKPN~~k~p~~fd~~~V~-----------~QLr~~GvLE 642 (717)
T cd01382 575 NDTKQKAGKLSFISVGNKFKTQLNLLLEKLRSTGSSF-IRCIKPNLKMVSHQFEGAQIL-----------SQLQCSGMVS 642 (717)
T ss_pred ccccccccCccCccHHHHHHHHHHHHHHHHhccCCee-eeeeCCCcccCCCCCChHHHH-----------HHHHhcchHH
Confidence 1357999999999987 999999 999999999999999965542 2223222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy18109 442 LAVLIQKVWRGYHQRKDFLKR 462 (602)
Q Consensus 442 ~A~~IQk~~Rg~~aRk~y~k~ 462 (602)
+ |+-.--||..|..|...
T Consensus 643 ~---vri~r~Gyp~R~~f~~F 660 (717)
T cd01382 643 V---LDLMQGGFPSRASFHEL 660 (717)
T ss_pred H---HHHHHccCchhhhHHHH
Confidence 2 22233488888877654
No 14
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=100.00 E-value=5.7e-96 Score=834.70 Aligned_cols=372 Identities=36% Similarity=0.590 Sum_probs=346.4
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|++++++++|+| .++++|+||+++++. .++++||+++|++++.||+.|||+++|+.+||+|||
T Consensus 201 qLl~g~~~~~~~~l~L-~~~~~y~yL~~~~~~------------~~~~~~d~~~f~~~~~al~~lG~~~~e~~~I~~iLa 267 (677)
T smart00242 201 QLLAGASEELKKELGL-KSPEDYRYLNQGGCL------------SVDGIDDAEEFKETLNAMRVLGFSEEEQESIFKILA 267 (677)
T ss_pred HHHcCCCHHHHHhcCC-CChhhCceeCCCCCc------------cCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7999999999999999 579999999999876 778999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|.+.+..+ ....+.+.+.++.+|+||||++++|.++|+++++ .+ ++|.+.++++++||..+|
T Consensus 268 aILhLGni~F~~~~~~~--~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~--~~-----~~e~~~~~~~~~~a~~~r 338 (677)
T smart00242 268 AILHLGNIEFEEGRNDN--AASTVKDKEELENAAELLGVDPEELEKALTKRKI--KT-----GGEVITKPLNVEQALDAR 338 (677)
T ss_pred HHHhhcceeEEecCCCC--cccccCCHHHHHHHHHHhCCCHHHHHHHhcccEE--Ee-----CCceEEecCCHHHHHHHH
Confidence 99999999998754321 1223889999999999999999999999999999 77 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|+|||+||+|||+|||.+||++|.++. ....+||||||||||+|+ .||||||||||||||||++|++++|+.||
T Consensus 339 d~lak~lY~~lF~wiV~~iN~~l~~~~-~~~~~IgiLDifGFE~f~-----~NsfEQLcINyaNEkLq~~f~~~~f~~eq 412 (677)
T smart00242 339 DALAKALYSRLFDWLVKRINKSLSFKD-GSTYFIGVLDIYGFEIFE-----VNSFEQLCINYANEKLQQFFNQHVFKLEQ 412 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-CCceEEEEEecccccccc-----cCCHHHHHhHhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998654 446799999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccCCCC
Q psy18109 241 EEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLSTPS 315 (602)
Q Consensus 241 eeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~~~~ 315 (602)
++|++|||+|++|+|.||++|+|||+++|.|||++||||| ||++|++||++.+++|++|.+++
T Consensus 413 ~~y~~EgI~~~~i~~~dN~~~l~li~~~~~Gil~lLdee~~~~~~td~~~~~kl~~~~~~~~~~~~~~------------ 480 (677)
T smart00242 413 EEYEREGIDWTFIDFFDNQDCIDLIEKKPPGILSLLDEECRFPKATDQTFLEKLNQTHEKHPHFSKPR------------ 480 (677)
T ss_pred HHHHhcCCCCCCCCCCCcHHHHHHHHcCCccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCccCCC------------
Confidence 9999999999999999999999999999999999999999 99999999999999999997652
Q ss_pred CCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC------CCCCCccchhhcc
Q psy18109 316 SAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET------RVPEAQPTRFRIS 389 (602)
Q Consensus 316 ~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~------~r~~Tv~s~fk~s 389 (602)
...+..|+|+||||+|+|+++||++||+|.++++++++|++|+|++|+.||+... ++++||+++||.|
T Consensus 481 ------~~~~~~F~I~H~AG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~~~~tv~~~fk~~ 554 (677)
T smart00242 481 ------KKGRTEFIIKHYAGDVTYDVTGFLEKNKDTLFKDLIELLQSSKNPLIASLFPSGESNAGSKKRFRTVGSQFKES 554 (677)
T ss_pred ------CCCCCeEEEEecceeEeecCccHHHHccchhhHHHHHHHHhCCcHHHHHHhccccccccccCCCCcHHHHHHHH
Confidence 1246789999999999999999999999999999999999999999999997643 5688999999999
Q ss_pred ccC------CCCceeEEEecccCCCCCCCCcccccc
Q psy18109 390 ILG------SSTLKYSILKVCPNIVDRPSMDEIKLC 419 (602)
Q Consensus 390 l~~------~t~phy~IRCIKPN~~k~p~~fdyk~L 419 (602)
|.. +|+||| |||||||+.|+|+.||-+.+
T Consensus 555 L~~L~~~l~~t~~hf-IRCIKPN~~k~~~~Fd~~~V 589 (677)
T smart00242 555 LNKLMDTLNSTNPHF-IRCIKPNEEKKPGDFDSSLV 589 (677)
T ss_pred HHHHHHHHhccCCeE-EEEeCCCcccCcccccHHHH
Confidence 987 999999 99999999999999996554
No 15
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=100.00 E-value=4.7e-95 Score=828.87 Aligned_cols=402 Identities=34% Similarity=0.560 Sum_probs=359.5
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|+++++|++|+| .++++|+||+++++. .++++||+++|++++.||++|||+++|+.+||+|||
T Consensus 193 qll~g~~~~~~~~l~L-~~~~~y~yL~~~~~~------------~~~~~~d~~~f~~~~~al~~lg~~~~e~~~i~~iLa 259 (679)
T cd00124 193 QLLAGASPEERKKLGL-KRPESYRYLNQGGCN------------DVDGIDDAEEFEELKEALKSLGFSEEEIESIFRILA 259 (679)
T ss_pred HHHcCCCHHHHHhcCC-CCcccCeeeCCCCcc------------cCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7999999999999999 678999999999985 568999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|.+.+..+ .+.+.+.+++.++.+|+||||++++|.++||++++ .+ ++|.+.++++++||..+|
T Consensus 260 aILhLGni~f~~~~~~~-~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~--~~-----~~~~~~~~~~~~~a~~~r 331 (679)
T cd00124 260 AILHLGNIEFKSVGGEG-QEAAEVKNTEVLSKAAELLGLDPEELEEALTYKVT--KV-----GGEVITIPLTKEEAVDSR 331 (679)
T ss_pred HHHhhcCeeEEecCCCC-cceeecCCHHHHHHHHHHhCCCHHHHHHHhhccEE--Ee-----CCceEEecCCHHHHHHHH
Confidence 99999999999865432 23578999999999999999999999999999999 77 889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||+|||+|||.+||.+|.+.. ....+||||||||||+|+ .|||||||||||||||||+|++++|+.||
T Consensus 332 dalak~lY~~lF~wiV~~iN~~l~~~~-~~~~~IgiLDi~GFE~f~-----~NsfEQLcINy~NEkLq~~f~~~~f~~eq 405 (679)
T cd00124 332 DSLAKALYSRLFDWIVSRINSSLKPKD-GRSLFIGILDIFGFEIFE-----KNSFEQLCINYANEKLQQFFNQHVFKLEQ 405 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCceeeEEeccccccCC-----CCCHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998753 345799999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccCCCC
Q psy18109 241 EEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLSTPS 315 (602)
Q Consensus 241 eeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~~~~ 315 (602)
++|++|||.|+.|+|.||++|+|||+++|.|||++||||| +|++|++|+++.+++|++|..+
T Consensus 406 ~~y~~EgI~~~~i~~~dn~~~ldli~~~~~Gi~~lLdee~~~~~~~d~~~~~kl~~~~~~~~~~~~~------------- 472 (679)
T cd00124 406 EEYQEEGIDWESIDFTDNQEVIDLIEKKPGGLLSLLDEECLFPKGTDETFLEKLNNKLKSNNAFYPA------------- 472 (679)
T ss_pred HHHHhcCCCccCCcCCCCHHHHHHHhcCCCcHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCcccccC-------------
Confidence 9999999999999999999999999999999999999999 9999999999999999987332
Q ss_pred CCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC-----------------CC
Q psy18109 316 SAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET-----------------RV 378 (602)
Q Consensus 316 ~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~-----------------~r 378 (602)
+...+..|+|+||||+|+|+++||++||+|.+++++.++|++|++++|+.||+... ++
T Consensus 473 -----~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~~~~~~~~~~~ 547 (679)
T cd00124 473 -----KKNAPTEFTIKHYAGDVTYDARGFLEKNKDVLSPELVSLLKSSSNPFIRELFESELSKTGNSSTGSTSSKGKKKK 547 (679)
T ss_pred -----CCCCCCceEEEeeceeEEecCCCHHHhcCCcccHHHHHHHHhCCcHHHHHHhccccccccccccccccccccccC
Confidence 12246789999999999999999999999999999999999999999999997631 46
Q ss_pred CCCccchhhccccC------CCCceeEEEecccCCCCCCCCccccccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 379 PEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDEIKLCCRGSVDVSVFELEEFRRDRLVDLAVLIQKVWRG 452 (602)
Q Consensus 379 ~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fdyk~L~~ggv~~tlf~LE~~R~~~l~~~A~~IQk~~Rg 452 (602)
++|++++||.||.. +|+||| |||||||+.|+|+.||-+.+. ++.|..-+-+ .|+-.--|
T Consensus 548 ~~tv~~~f~~qL~~L~~~L~~t~~hf-IRCIKPN~~k~p~~fd~~~V~-----------~QLr~~GvlE---~irirr~G 612 (679)
T cd00124 548 GQTVGSQFRTSLDALMATLNSTEPHF-IRCIKPNEEKKPNAFDSGKVL-----------QQLRYLGILE---TIRIRRLG 612 (679)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCeE-EEEECCCcccCCCccChHHHH-----------HHHHHhchHH---HHHHHHcc
Confidence 78999999999988 999999 999999999999999965543 2222222222 23333347
Q ss_pred HHHHHHHHHH
Q psy18109 453 YHQRKDFLKR 462 (602)
Q Consensus 453 ~~aRk~y~k~ 462 (602)
|..|..|...
T Consensus 613 yp~R~~~~eF 622 (679)
T cd00124 613 FSVRIPFDEF 622 (679)
T ss_pred CCceeeHHHH
Confidence 7777766544
No 16
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=100.00 E-value=9.8e-95 Score=817.58 Aligned_cols=387 Identities=28% Similarity=0.435 Sum_probs=339.2
Q ss_pred CccCCCCHhhH-hhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCc----chHHHHHHHHHHHHHcCCCchhhHHH
Q psy18109 1 MFVSACPLNDL-KLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHL----DDKACFLRTRKACEALGFTPDEILDI 75 (602)
Q Consensus 1 qLLaGas~~~~-~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~----dD~~~f~~~~~Am~~lGfs~~e~~~I 75 (602)
|||+|++++++ ++|+| .+++.|+||+++++. .++++ +|+++|++|++||++|||+++|+..|
T Consensus 193 qLl~G~~~~~~~~~~~L-~~~~~~~yL~~~~~~------------~~~~~~~~~~~~~~f~~~~~al~~lg~~~~e~~~I 259 (653)
T cd01379 193 YIYAGLAEEKKLAEYKL-PESKTPRYLQNEATR------------VVQDITSNKFYKDQFEQIEQCFRVIGFTDEEVGSV 259 (653)
T ss_pred HHHhCCCHHHHHHhcCC-CCccccCccCCCCcc------------ccCCCccchhHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 79999998765 88999 678999999998863 33443 46899999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHH
Q psy18109 76 FKVVASVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGE 155 (602)
Q Consensus 76 ~~ilAaILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~q 155 (602)
|+|||||||||||+|.+.+..+..+.+.+.+.+.+..+|+||||+.++|.++||++++ .+ ++|.+.++++++|
T Consensus 260 ~~iLaaILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~A~LLgv~~~~L~~~L~~~~~--~~-----~ge~i~~~~~~~q 332 (653)
T cd01379 260 YRILAAILNLGDIEFGSVASEHQTDKSRVSNVAALENAASLLCIRSDELQEALTSHCV--VT-----RGETIVRHNTVEK 332 (653)
T ss_pred HHHHHHHHhhcceEEEeccccCCCcccccCCHHHHHHHHHHhCCCHHHHHHHhcccEE--Ee-----CCceeeecCCHHH
Confidence 9999999999999998865444456788999999999999999999999999999999 77 8999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccCCC----CCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHH
Q psy18109 156 ATVTRNSLCKALYSRLFTYIVNRTNKAVKVKPS----GKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLF 231 (602)
Q Consensus 156 A~~~RDaLaK~LY~rLF~wiV~~IN~~l~~~~~----~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f 231 (602)
|..+||||||+||+|||+|||.+||.+|.+... ....+||||||||||+|+ .|||||||||||||||||+|
T Consensus 333 A~~~rdalak~lY~~LF~wiV~~IN~~l~~~~~~~~~~~~~~IgiLDI~GFE~f~-----~NsfEQLcINyaNEkLQ~~f 407 (653)
T cd01379 333 ATDARDAMAKALYGRLFSWIVNRINSLLKHDRNASNSSDQLNVGILDIFGFENFK-----KNSFEQLCINIANEQIQYYF 407 (653)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccceEEEEeccccccCC-----CCCHHHHHhhhhHHHHHHHH
Confidence 999999999999999999999999999987543 235689999999999999 99999999999999999999
Q ss_pred HHHhHHHHHHHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCC
Q psy18109 232 TDVMLREEQEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVR 306 (602)
Q Consensus 232 ~~~~f~~eqeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~ 306 (602)
++++|+.||+||++|||+|+.|+|.||++|+|||+++|.|||++||||| ||++|++|+++.+++ ++|..++
T Consensus 408 ~~~vf~~Eq~eY~~EgI~~~~i~~~dN~~~ldli~~kp~Gil~lLdee~~~~~~td~~~~~kl~~~~~~-~~~~~~~--- 483 (653)
T cd01379 408 NQHIFAWEQQEYLNEGVDARLVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQTLVEKFEDNLKS-KFFWRPK--- 483 (653)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHhHccCCCcHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-CCccCCC---
Confidence 9999999999999999999999999999999999999999999999999 999999999988754 4453331
Q ss_pred CCCccCCCCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCCCCCCCccchh
Q psy18109 307 TPGVLSTPSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEETRVPEAQPTRF 386 (602)
Q Consensus 307 ~p~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~~r~~Tv~s~f 386 (602)
.....|+|+||||+|+|+++||++||+|.|+++++++|++| .||+++|
T Consensus 484 ----------------~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S----------------~tv~~~f 531 (653)
T cd01379 484 ----------------RVELSFGIHHYAGKVLYNASGFLEKNRDFLPADIVLLLRSS----------------QTVASYF 531 (653)
T ss_pred ----------------CCCCceEEEEeceeEeecCCCHHHhccccccHHHHHHHHhC----------------cHHHHHH
Confidence 13568999999999999999999999999999999999988 5899999
Q ss_pred hccccC------CCCceeEEEecccCCCCCCCCccccccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 387 RISILG------SSTLKYSILKVCPNIVDRPSMDEIKLCCRGSVDVSVFELEEFRRDRLVDLAVLIQKVWRGYHQRKDFL 460 (602)
Q Consensus 387 k~sl~~------~t~phy~IRCIKPN~~k~p~~fdyk~L~~ggv~~tlf~LE~~R~~~l~~~A~~IQk~~Rg~~aRk~y~ 460 (602)
|.||.+ +|+||| |||||||+.|+|+.||-+++. +++|..-+-. .|+-.--||..|..|.
T Consensus 532 r~~l~~L~~~l~~t~~hf-IRCIKPN~~k~~~~fd~~~V~-----------~QLr~~GvlE---~iri~r~Gyp~r~~~~ 596 (653)
T cd01379 532 RYSLMDLLSKMVVGQPHF-VRCIKPNEDRQAKKFDAEKVL-----------KQLRYTGILE---TARIRRQGFSHRILFA 596 (653)
T ss_pred HHHHHHHHHHHhccCCce-EEeeCCCcccCccccCHHHHH-----------HHHHHcchHH---HHHHHHcCCCccccHH
Confidence 999987 999999 999999999999999965542 2333322222 2222334888888877
Q ss_pred HHH
Q psy18109 461 KRK 463 (602)
Q Consensus 461 k~r 463 (602)
...
T Consensus 597 ~F~ 599 (653)
T cd01379 597 NFI 599 (653)
T ss_pred HHH
Confidence 553
No 17
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=100.00 E-value=9.2e-92 Score=807.14 Aligned_cols=375 Identities=36% Similarity=0.600 Sum_probs=323.9
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|++++++++|+| .++++|+||+++++. .+++.||+++|+++++||+.|||+++|+.+||+|||
T Consensus 196 qll~G~~~~~~~~l~L-~~~~~~~yL~~~~~~------------~~~~~~d~~~f~~l~~al~~lg~~~~e~~~I~~iLa 262 (689)
T PF00063_consen 196 QLLAGADDEERKELRL-NDASDYRYLNQSGCS------------TIPGIDDAEEFQELKDALKTLGFSDEEIDDIFRILA 262 (689)
T ss_dssp HHHHTSSHHHHHHTT--S-GGGSTTCCTTSSS------------SBTTCTHHHHHHHHHHHHHHTT--HHHHHHHHHHHH
T ss_pred hhhhccchhhhhcccc-cccccccceeccccc------------ccCCccCHHHhhhhhhhhccccCchhHHHHHHHHHH
Confidence 6899999999999999 699999999998875 678999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|.+.. ..+.+.+.+.+.++.+|+||||++++|.++||+|++ .+ ++|.++++++++||.++|
T Consensus 263 aILhLGni~F~~~~---~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~--~~-----~~e~~~~~~~~~~a~~~r 332 (689)
T PF00063_consen 263 AILHLGNIEFVEDE---SDESAEVENSEELQKAAELLGVDSEELEKALTTRTI--KV-----GGETVTKPLSVEQASDAR 332 (689)
T ss_dssp HHHHHTTSSEEEET---TSSSEEESTSHHHHHHHHHTTS-HHHHHHHHHSEEE--ES-----TTSEEEEE-BHHHHHHHH
T ss_pred HHhhhccccccccc---cccceeechHHHHHHhhhhcCCCHHHHHHHHhhccc--cc-----cccccccccchhhhhhhh
Confidence 99999999999864 235678999999999999999999999999999999 77 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||+|||+|||++||.+|++.......+||||||||||+|. .||||||||||||||||++|++++|+.||
T Consensus 333 dalak~LY~~LF~wIV~~iN~~L~~~~~~~~~~IgILDi~GFE~~~-----~N~fEQLciNyanErLq~~f~~~~f~~e~ 407 (689)
T PF00063_consen 333 DALAKALYSRLFDWIVERINSALSPSESENSSSIGILDIFGFENFS-----VNSFEQLCINYANERLQQFFNQHIFKSEQ 407 (689)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--SS-S-SEEEEEEEEE-B---S-----SB-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHhhhhccccccccccccCcccCcccccccc-----ccccccceeeeccccccceeeeecccccc
Confidence 9999999999999999999999998765567899999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccc-cChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhcc-CCCCCCcCCCCCCCCCccCC
Q psy18109 241 EEYRRENIEWCYVEF-FNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYS-SSLTPERGRGGVRTPGVLST 313 (602)
Q Consensus 241 eeY~~EGI~w~~i~~-~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~-~~~~~~~~~~~~~~p~~~~~ 313 (602)
++|++|||.|++++| .||++|+|||+++|.|||++||||| +|++|++++.+.+ ++|+.|.+++.
T Consensus 408 ~~y~~EgI~~~~i~~~~dn~~~ldLi~~~~~Gil~lLdee~~~~~~sd~~fl~kl~~~~~~~~~~~~~~~~--------- 478 (689)
T PF00063_consen 408 EEYKEEGIDWPFIDFNPDNQPCLDLIEKKPKGILSLLDEECLLPRGSDESFLEKLLKRHSGKHPSFVKPRF--------- 478 (689)
T ss_dssp HHHHHTTSSCSCS-GCGHHHHHHHHHHSSTTSHHHHHHHHCTSTTS-HHHHHHHHHHHHTTTSTTEECTSS---------
T ss_pred cccccccccccccccccCchhhhhhhccccCCHHHHhhhhhhcccchhhHHHHHHHhhcccCCCccccccc---------
Confidence 999999999999999 9999999999999999999999999 8999999999999 89998865421
Q ss_pred CCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC-----------------
Q psy18109 314 PSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET----------------- 376 (602)
Q Consensus 314 ~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~----------------- 376 (602)
.+...+..|+|+||||+|+|++.||++||+|.++++++++|+.|++++|+.||....
T Consensus 479 ------~~~~~~~~F~I~HyaG~V~Y~v~gfleKNrD~l~~~~~~ll~~S~n~~v~~lf~~~~~~~~~~~~~~~~~~~~~ 552 (689)
T PF00063_consen 479 ------SRSTSKSSFTIKHYAGDVTYDVEGFLEKNRDPLSQDFVSLLRSSTNSFVSSLFSSEATATSSSSSSLSRRSSSS 552 (689)
T ss_dssp ------STSSTTSCEEEEETTEEEEEE-TTHHHHHHE-S-HHHHHHHHTSSSHHHHHHTHSHHH---S-S-S-BTTTTCC
T ss_pred ------ccccCCCceEeecccCcceeccccccccccchHHHHHHHHHHhCcCcccccccccccccccccccccccccccc
Confidence 022357889999999999999999999999999999999999999999999996431
Q ss_pred ----------CCCCCccchhhccccC------CCCceeEEEecccCCCCCCCCcccccc
Q psy18109 377 ----------RVPEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDEIKLC 419 (602)
Q Consensus 377 ----------~r~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fdyk~L 419 (602)
+++.|++++|+.||.. +|.||| |||||||+.+.|+.||-+++
T Consensus 553 ~~~~~~~~~~~~~~tv~~qf~~sL~~L~~~L~~t~~hf-IrCIkPN~~~~~~~FD~~~V 610 (689)
T PF00063_consen 553 STQSRSSGSKKKKSTVSSQFRSSLDELMDTLRSTQPHF-IRCIKPNDQKKPNQFDSKLV 610 (689)
T ss_dssp CTTSSCCCGGTCSSBHHHHHHHHHHHHHHHHCTSEEEE-EEEE-SSSS--TT---HHHH
T ss_pred cccccccccccccccccccccccHHHHHhhhhhcccce-EEEeccccccccccccchhe
Confidence 3468999999999988 899999 99999999999999995444
No 18
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=100.00 E-value=7e-90 Score=787.93 Aligned_cols=376 Identities=20% Similarity=0.237 Sum_probs=313.7
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|++++++++|+|...++.|.|...+.+. ..+++||+++|++|++||++|||+++|+..||+|||
T Consensus 194 qLlaG~~~~~~~~l~L~~~~~~~~~~~~~~~~------------~~d~~~D~~~f~~~~~Al~~lGfs~~e~~~If~iLa 261 (767)
T cd01386 194 QLLAGVDGDLRTELHLEQMAESSSFGMGGLSK------------PEDKQKAAIDFSRLQQAMEVLGISEGEQRAIWRVLA 261 (767)
T ss_pred HHHhCCCHHHHHHhcCCCccccchhhcCCCCC------------CcCcccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 79999999999999995444433332222221 356899999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCC--------CCCceEEeeCC
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHED--------CGSTLIVTELS 152 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~--------~~~e~i~~~l~ 152 (602)
||||||||+|... . +.+.+.+++.++.+|+||||+.++|.++|+++++ ..+... ...+.+..+++
T Consensus 262 aILhLGNi~f~~~---~--~~~~~~~~~~~~~vA~LLgv~~~~L~~al~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (767)
T cd01386 262 AIYHLGAAGATKV---A--GRKQFARPEWAQKAAELLGCPLEELSSATFKHTL--RGGINQMTTGPQRPGLSDTETSSGL 334 (767)
T ss_pred HHHhccCceeeec---C--CccccCCHHHHHHHHHHhCCCHHHHHHHhcccEE--eecceeeeccccccccccccccCCC
Confidence 9999999999862 1 3467889999999999999999999999999887 441000 01234455678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCC-CCCCCchhhhhhhhhhhHHHHHH
Q psy18109 153 AGEATVTRNSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGK-CGSSNGFEQFIINFCNEKLHQLF 231 (602)
Q Consensus 153 ~~qA~~~RDaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~-~~~~NsFEQlcINy~NEkLQq~f 231 (602)
+++|.++||||||+||+|||+|||.+||.+|.+... ...+||||||||||+|+.. ....|||||||||||||||||+|
T Consensus 335 ~~~A~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~-~~~~IgiLDIfGFE~f~~n~~~~~NsfEQLcINyaNEkLQq~f 413 (767)
T cd01386 335 KMTAVECLEGMASGLYSELFAAVVSLINRSISSSHH-SIASIMLVDTPGFQNPASQGKDRAATFEELCHNYLQERLQLLF 413 (767)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-CCcEEEEEecccccccccccccCCCCHHHHhhhhhHHHHHHHH
Confidence 999999999999999999999999999999987543 3468999999999999811 01249999999999999999999
Q ss_pred HHHhHHHHHHHHHhccCccccccc-cChHHHHHHHhcCc--------------ccccccccccC-----CHHHHHHHHhh
Q psy18109 232 TDVMLREEQEEYRRENIEWCYVEF-FNNSAICDIIETNS--------------HGILSLLDEES-----SDEAFLLKLGS 291 (602)
Q Consensus 232 ~~~~f~~eqeeY~~EGI~w~~i~~-~dN~~~~dLie~~~--------------~GIl~lLDeec-----tD~~fl~kl~~ 291 (602)
++++|+.||+||++|||+|+.+.+ .||++|+|||+++| .|||++||||| ||++|++||++
T Consensus 414 ~~~vF~~Eq~eY~~EGI~~~~~~~~~dn~~~i~lid~~p~~~~~~~~~~~~~~~GIl~lLDEec~~p~~tD~~f~~kl~~ 493 (767)
T cd01386 414 HHRTFVQPLERYAEEGVEVEFDLAEPSPGTTVALVDQAPQQVVVPAGLRAEDARGLLWLLDEEALVPGSSDDTFLERLFA 493 (767)
T ss_pred HHHHHHHHHHHHHhhcCCccccccCCCchhhHHHhhcccccccccchhhccCCCchhhhhhHhhcCCCCcHHHHHHHHHH
Confidence 999999999999999999987665 79999999999864 59999999999 99999999999
Q ss_pred ccCCCCCCcCCCCCCCCCccCCCCCCCCCCCCCCCccEEeeccc--eeeeeechhhhhhccch-HHHHHHHHHcCccccc
Q psy18109 292 YSSSLTPERGRGGVRTPGVLSTPSSAGGDNSLPPFCFRLRHYAG--TVLYNVRGFVEKNGELL-HRDVSLAMYTSQHPLL 368 (602)
Q Consensus 292 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~F~I~HyAG--~V~Y~v~gfleKN~D~l-~~d~~~ll~~S~~~~i 368 (602)
.+++|++|.+... +..+...+..|+|+|||| +|+|++.||+|||||.+ +.+++++|++|++++|
T Consensus 494 ~~~~~~~~~~~~~-------------~~~~~~~~~~F~I~HyAG~~~V~Y~~~gfleKNkD~~~~~~~~~ll~~S~~~~i 560 (767)
T cd01386 494 AYGDRETRETGLS-------------RLRTCEGPLQFVLFHLLGTNPVLYDVTGWLRRAKPNPAALNAPQLLQDSKREEI 560 (767)
T ss_pred HhccCCCcccCcc-------------ccccCCCCCcEEEEEcCCCCceEecCCCHHHhcCCCCChHHHHHHHHhCCcHHH
Confidence 9999998865421 011112356799999999 59999999999999965 7899999999999999
Q ss_pred cccccCCC---------------------------C----------CCCCccchhhccccC------CCCceeEEEeccc
Q psy18109 369 KHLFPEET---------------------------R----------VPEAQPTRFRISILG------SSTLKYSILKVCP 405 (602)
Q Consensus 369 ~~lf~~~~---------------------------~----------r~~Tv~s~fk~sl~~------~t~phy~IRCIKP 405 (602)
+.||+... + ++.|++++||.||++ +|+||| ||||||
T Consensus 561 ~~lF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~tv~~qFk~qL~~Lm~~L~~t~phf-IRCIKP 639 (767)
T cd01386 561 NSLFQGRAGLAPVCLGAGAGLEGTSQQALRRSSSIRRTFTSSTAAVKRKSPCVQVKLQVDALIDTLRRSGLHF-VHCYLP 639 (767)
T ss_pred HHHHhcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHhccCCee-EEEeCc
Confidence 99995210 0 123678999999988 999999 999999
Q ss_pred CCCCC
Q psy18109 406 NIVDR 410 (602)
Q Consensus 406 N~~k~ 410 (602)
|+.|+
T Consensus 640 N~~k~ 644 (767)
T cd01386 640 QHNGG 644 (767)
T ss_pred ccccc
Confidence 99985
No 19
>KOG0163|consensus
Probab=100.00 E-value=1.5e-88 Score=730.41 Aligned_cols=393 Identities=32% Similarity=0.486 Sum_probs=347.0
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccc--------cCC---CCC---CCCCCCCCcchHHHHHHHHHHHHHcC
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNH--------ISS---SPM---FSPATSPHLDDKACFLRTRKACEALG 66 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~--------~~~---~~~---~~~~~~~~~dD~~~f~~~~~Am~~lG 66 (602)
||+||+|+++++.|.| ..|++|+||+.|..... +++ ++. .++...+-+||..+|..+..||..+|
T Consensus 250 ~LiAGas~dl~~kL~L-~~pd~f~YL~rG~t~yFan~~t~~ki~~nr~S~~~~~~~~~kD~iidD~~dF~rl~~Al~~~G 328 (1259)
T KOG0163|consen 250 QLIAGASPDLRKKLSL-GKPDDFRYLKRGCTQYFANAKTEQKIPGNRKSKNHQQKGSLKDPIIDDYQDFHRLEKALKLLG 328 (1259)
T ss_pred HHHcCCCHHHHHHhcc-CCchhhhHHhcchhhhccCcchhhcCcccccCccccccCcccCcccccHHHHHHHHHHHHhcC
Confidence 7999999999999999 89999999998754211 111 122 14556678899999999999999999
Q ss_pred CCchhhHHHHHHHHHHHhhcceeeEeccCCCCCCceeecCh--HHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCC
Q psy18109 67 FTPDEILDIFKVVASVLKLGNVVFIPSNNIDGTEGCTVSND--YELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGS 144 (602)
Q Consensus 67 fs~~e~~~I~~ilAaILhLGNi~F~~~~~~~~~~~~~i~~~--~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~ 144 (602)
++++|...||++||||||||||+|++... |...+|.|.+. +.|..+|+|||+|+++|...||.|.| .+..+|.+|
T Consensus 329 lsd~Ekl~i~s~vA~vLHLGNieFEE~~d-dsrGGC~v~n~seqsL~~~a~LLGld~~elr~~L~aRvM--qtt~GG~kG 405 (1259)
T KOG0163|consen 329 LSDTEKLFIWSTVAAVLHLGNIEFEEIPD-DSRGGCQVSNGSEQSLTIAAELLGLDQTELRTGLCARVM--QTTKGGFKG 405 (1259)
T ss_pred CChHHHHHHHHHHHHHHHccccchhcccC-cCCCceecccCchhhHHHHHHHhCCCHHHHHHHHHHHHH--HhccCCccc
Confidence 99999999999999999999999998653 44578999874 56999999999999999999999999 666677799
Q ss_pred ceEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhh
Q psy18109 145 TLIVTELSAGEATVTRNSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCN 224 (602)
Q Consensus 145 e~i~~~l~~~qA~~~RDaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~N 224 (602)
.+|.+||.+.||..+||||||++|++||+|||.+||+++-... ...+||||||.|||.|. +||||||||||||
T Consensus 406 TvIrVPLK~~eA~n~RDALaKaiYSkLFD~lV~~iNqsiPFe~--St~fiGVLDiAGFEyf~-----~NSFEQFCINyCN 478 (1259)
T KOG0163|consen 406 TVIRVPLKIHEASNARDALAKAIYSKLFDWLVGRINQSIPFEK--STFFIGVLDIAGFEYFA-----VNSFEQFCINYCN 478 (1259)
T ss_pred eEEEeeccHHhhcchHHHHHHHHHHHHHHHHHHHhhccccccc--ccceeEEEeeccceeee-----cccHHHHHHHHHH
Confidence 9999999999999999999999999999999999999996543 34699999999999999 9999999999999
Q ss_pred hHHHHHHHHHhHHHHHHHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCC
Q psy18109 225 EKLHQLFTDVMLREEQEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPE 299 (602)
Q Consensus 225 EkLQq~f~~~~f~~eqeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~ 299 (602)
||||++||+.+++.|||.|++||+....|.|.||++|++|||.+..|||.|||||. ++..|..+.++.+.+|=..
T Consensus 479 EKLQ~FFNerILkeEQElYekEGLnv~ei~f~DNqDcIeL~E~K~~GifdlLDEEaklP~~s~qhFT~~vHe~~k~HfRL 558 (1259)
T KOG0163|consen 479 EKLQKFFNERILKEEQELYEKEGLNVPEIEFTDNQDCIELIEAKSNGIFDLLDEEAKLPKPSYQHFTARVHESNKNHFRL 558 (1259)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCceEeccchhHHHHHHHhccchhhhhhhhccCCCcchHHHHHHHHHhhhcceee
Confidence 99999999999999999999999999999999999999999999999999999999 9999999999988887544
Q ss_pred cCCCCCCCCCccCCCCCCCCCCCC-CCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC--
Q psy18109 300 RGRGGVRTPGVLSTPSSAGGDNSL-PPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET-- 376 (602)
Q Consensus 300 ~~~~~~~~p~~~~~~~~~~~~~~~-~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~-- 376 (602)
..|+. ++....+.+ ....|.|+||||.|.|.+.-|+|||.|.|+..+..|+..|++|++.+||+.+.
T Consensus 559 ~~PRk----------SklksHR~lRDdEG~liRHfAGaVCYeT~~FvEKNnD~LH~SLe~Li~es~~~ll~sLF~S~s~t 628 (1259)
T KOG0163|consen 559 DLPRK----------SKLKSHRELRDDEGFLIRHFAGAVCYETEQFVEKNNDALHNSLEGLIEESDNPLLVSLFPSGSST 628 (1259)
T ss_pred cCCch----------hhhhhhhhhccccceeeeecccceeechHHHHHhccHHHHHHHHHHHHhccchHHHHHccCCCCC
Confidence 43322 111222233 24569999999999999999999999999999999999999999999999863
Q ss_pred --------CCCCCccchhhccccC------CCCceeEEEecccCCCCCCCCcc
Q psy18109 377 --------RVPEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDE 415 (602)
Q Consensus 377 --------~r~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd 415 (602)
-+..+||++||++|.. +|..|| |||||||..+.|..||
T Consensus 629 ~a~~~~gkL~~iSVGaKFKtQL~~LldKL~stGt~F-iRCiKPN~kM~~~~Fe 680 (1259)
T KOG0163|consen 629 SAKQTRGKLKFISVGAKFKTQLSELLDKLESTGTHF-IRCIKPNSKMIDRHFE 680 (1259)
T ss_pred ccccccceeeEEehhHHHHHHHHHHHHHHHhcCCee-EEeecCcccccccccc
Confidence 1235899999999987 999999 9999999999999999
No 20
>KOG0161|consensus
Probab=100.00 E-value=5.5e-88 Score=808.56 Aligned_cols=432 Identities=32% Similarity=0.503 Sum_probs=393.9
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|+++.++..|.|+.++.+|.|+.++.. .++|+||++.|+.|..||++|||+++|+.+||+|+|
T Consensus 281 qlls~~~~~l~~~l~L~~~~~~Y~f~~~~~~-------------~i~g~dd~eef~~t~~a~~ilgfs~~E~~~~~~i~s 347 (1930)
T KOG0161|consen 281 QLLSGADPELKEELLLSDNVKDYKFLSNGES-------------TIPGVDDAEEFQETDEAMDILGFSEEEKISIFRIVS 347 (1930)
T ss_pred HHHhCCCHHHHHHHhhcccchhhhhhccccC-------------CCCCcchHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 6899999999999999888999999999987 789999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
|||||||+.|.... +++.+.+.+...+..+|.|||++.+.|.++++.+.+ ++ +++.+.+..+.+|+..+.
T Consensus 348 ailhlGn~~f~~~~---~~~qa~~~~~~~a~ka~~llg~~~~~~~~al~~pri--Kv-----g~e~v~k~q~~~q~~~~v 417 (1930)
T KOG0161|consen 348 AILHLGNIKFKQEP---REEQAEFDNTEVADKACHLLGINVEEFLKALLRPRI--KV-----GREWVSKAQNVEQVLFAV 417 (1930)
T ss_pred HHHHhcchhhhccc---cccccCCCCchHHHHHHHHcCCCHHHHHHHhcccce--ec-----cchhhhhcchHHHHHHHH
Confidence 99999999999853 457789999999999999999999999999999999 88 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
.||||++|+|+|.|||.+||.+|... ....+|||||||+|||||+ .||||||||||+||||||+||+|+|..||
T Consensus 418 ~alAk~lYerlF~wlV~riN~sld~~-~~~~~fIgvLDiaGFEIfe-----~nSFEQLciNytnEkLQqfFnh~mFvlEq 491 (1930)
T KOG0161|consen 418 EALAKALYERLFGWLVKRINKSLDSK-QQRDYFIGVLDIAGFEIFE-----FNSFEQLCINYTNEKLQQFFNHHMFVLEQ 491 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc-cccCCcceeeeeccccccC-----cCCHHHHHHHHHHHHHHhhhcchhhhhhH
Confidence 99999999999999999999999976 4556899999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccc-cChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhcc-CCCCCCcCCCCCCCCCccCC
Q psy18109 241 EEYRRENIEWCYVEF-FNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYS-SSLTPERGRGGVRTPGVLST 313 (602)
Q Consensus 241 eeY~~EGI~w~~i~~-~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~-~~~~~~~~~~~~~~p~~~~~ 313 (602)
++|.+|||.|++|+| .|-++|+||||+ |.||+|+||||| ||.+|++||...+ ++||.|..++
T Consensus 492 eeY~~EgIew~fidfG~Dlq~~idLIEk-p~Gi~slLdEEc~~PkAtd~tf~~kL~~~~~gk~~~f~~~k---------- 560 (1930)
T KOG0161|consen 492 EEYQREGIEWDFIDFGLDLQPTIDLIEK-PMGILSLLDEECVVPKATDKTFLEKLCDQHLGKHPKFQKPK---------- 560 (1930)
T ss_pred HHHHHhCCceeeeccccchhhhHHHHhc-hhhHHHHHHHHHhcCCCccchHHHHHHHHhhccCccccCcc----------
Confidence 999999999999999 799999999999 559999999999 9999999999988 9999997762
Q ss_pred CCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC---------------C-
Q psy18109 314 PSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET---------------R- 377 (602)
Q Consensus 314 ~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~---------------~- 377 (602)
....+..|.|.||||+|.|++.||++||+|+|+..++.+|..|++++|+.||++.. +
T Consensus 561 -------~~~~~~~F~l~HyaG~V~Y~~~~WL~Knkdpln~~v~~ll~~s~~~~v~~l~~~~~~~~~~~~~~~~~~~~K~ 633 (1930)
T KOG0161|consen 561 -------GKKAEAHFALVHYAGTVDYNVDGWLEKNKDPLNDNVVSLLKQSTNKLVSSLFQDYAGAAAAAKGGEALKKTKK 633 (1930)
T ss_pred -------cccchhhhheeeecceeccCccchhhcCCCCchHHHHHHHHhcccHHHHHHhhhhhccchhhhhhhhhcccCC
Confidence 12246789999999999999999999999999999999999999999999998611 1
Q ss_pred -CCCCccchhhccccC------CCCceeEEEecccCCCCCCCCcc-----------------------------------
Q psy18109 378 -VPEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDE----------------------------------- 415 (602)
Q Consensus 378 -r~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd----------------------------------- 415 (602)
...||+..+|.||+. +|+||| ||||.||+.|.|+.+|
T Consensus 634 g~F~Tvs~~~keql~~Lm~~l~~T~phF-vRCiIPn~~K~~g~ld~~lvl~QLrcngVLEgIRicR~GfPnr~~~~eFrq 712 (1930)
T KOG0161|consen 634 GSFRTVSQLYKEQLNKLMTTLRSTHPHF-VRCIIPNEEKKPGKLDAPLVLNQLRCNGVLEGIRICRQGFPNRMPFQEFRQ 712 (1930)
T ss_pred cchhhHHHHHHHHHHHHHHHhccCCCce-eEEeccCccccccccCHHHHHHHhhccCcHHHHHHHHhhCccccchHHHHH
Confidence 135788899998887 999999 9999999999999999
Q ss_pred -cccccc----CC-------------------------ccc------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 416 -IKLCCR----GS-------------------------VDV------SVFELEEFRRDRLVDLAVLIQKVWRGYHQRKDF 459 (602)
Q Consensus 416 -yk~L~~----gg-------------------------v~~------tlf~LE~~R~~~l~~~A~~IQk~~Rg~~aRk~y 459 (602)
|.++.+ +| ..+ ++..||++|..++....+.+|+.+|||++|+.|
T Consensus 713 Ry~lla~~~~~~~~~d~k~~~~~~~~~l~~d~~lyriG~tKvFfkaGvla~LEe~Rd~~ls~ii~~fQA~~Rg~l~r~~~ 792 (1930)
T KOG0161|consen 713 RYELLAADEPKKGFSDGKKACEKILEELLLDKNLYRIGHTKVFFKAGVLAHLEEMRDEKLSQIITLFQAAIRGYLARKEF 792 (1930)
T ss_pred hHHhhhhhhccccccccchhHHHHHHHHhcccceEeecceeeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 553333 11 111 266899999999999999999999999999999
Q ss_pred HHHH---HHHHHHHHHHHhhhhhh
Q psy18109 460 LKRK---RSQIIIASAWRSWRFVP 480 (602)
Q Consensus 460 ~k~r---~aai~IQ~~~R~~~~r~ 480 (602)
.+++ .|+.+||++.|.|...+
T Consensus 793 ~kr~~~~~ai~~iQ~N~r~~~~lr 816 (1930)
T KOG0161|consen 793 KKRLQQLDAIKVIQRNIRAYLKLR 816 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8774 37789999999886443
No 21
>KOG0160|consensus
Probab=100.00 E-value=4.2e-87 Score=753.84 Aligned_cols=429 Identities=31% Similarity=0.484 Sum_probs=392.6
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
||++|++ +++++|+| .++..|.||+|++|. ..+++||+.+|..++.||..+|++.++|..||++||
T Consensus 202 Qlca~~~-~~~~~l~L-~~~~~f~yl~q~~~~------------~i~~v~d~~e~~~t~~A~~~vgi~~~~q~~if~lla 267 (862)
T KOG0160|consen 202 QLCAGAP-EELEKLKL-GTLRRFSYLNQSACV------------LISGVSDAEEFLSTTEAMLFVGISESHQELIFRLLA 267 (862)
T ss_pred HHhcCCc-hhhhccCc-Cccccceecccccch------------hhcccccHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Confidence 7899999 99999999 789999999999997 889999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
|||||||++|....+. .......+.+..+|+|||++.+.|...|+.|.+ .+ ++|.+.++++..+|...|
T Consensus 268 ~ilhlGni~f~~~~~~----~~~~~~~~~~~~~a~Llg~~~~~l~~~L~~r~i--~~-----~~e~i~k~l~~~qa~~~r 336 (862)
T KOG0160|consen 268 AILHLGNIQFSSGVEE----TSSSPVDDHLWTAAELLGCDEEALEQWLSKRKI--LT-----ARESIVKPLTLSQAVKRR 336 (862)
T ss_pred HHhccCceEeeccccc----ccccccchHHHHHHHHhCCCHHHHHHHHHHHHh--hc-----ccceeecccCHHHHHHhh
Confidence 9999999999885432 222222337899999999999999999999999 88 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|++||.||++||+|+|.+||.+|.........+||||||||||.|+ .||||||||||+||||||.|++|+|+.||
T Consensus 337 D~lak~iys~LFdwlV~~in~sL~~~~~~~~~~igVLDiYgFEsF~-----~nsfeQfcINyanEkLqq~fnqHvfk~Eq 411 (862)
T KOG0160|consen 337 DALAKQLYSLLFDWLVAKINGSLGANDPKAERFIGVLDIYGFESFE-----VNSFEQFCINYANEKLQQQFNQHVFKLEQ 411 (862)
T ss_pred hhhHHHHHHHHHHHHHHHhhcccccCCCCccceeeeehcccccccc-----cCcHHHhhhhhHHHHhhHHHHHHHHHHHH
Confidence 9999999999999999999999997555556899999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccCCCC
Q psy18109 241 EEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLSTPS 315 (602)
Q Consensus 241 eeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~~~~ 315 (602)
+||..|+|+|..|+|+||++|+++||+ |.|++++|||+| +|++|..||.+.+.+|+.|.+++.
T Consensus 412 eey~~e~i~Ws~ief~dNq~~~~lie~-~~Gi~~Llde~c~lp~~t~~~~a~KL~~~~~~~~~f~kpr~----------- 479 (862)
T KOG0160|consen 412 EEYTKEEIDWSGIEFRDNQECLDLIEK-PLGILALLDEECMLPKGTDETLAQKLYQTLKRNKRFTKPRL----------- 479 (862)
T ss_pred HHHHhhccccccccCcCccchhhhhcc-ccchhhccchhccCCCCCcchHHHHHHHHhccCCccCCCCC-----------
Confidence 999999999999999999999999999 899999999999 999999999999999999977633
Q ss_pred CCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC------CCCCCccchhhcc
Q psy18109 316 SAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET------RVPEAQPTRFRIS 389 (602)
Q Consensus 316 ~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~------~r~~Tv~s~fk~s 389 (602)
....|+|.||||+|+|++.||++||||.+++++.++++.|+++++..+|+.-. .+..|++++||.+
T Consensus 480 --------~~~~f~v~hyAg~v~y~~~~fL~knrd~v~~el~~ll~~s~~~~~~~~~~~~~~~~~~~~~~~tv~s~fk~~ 551 (862)
T KOG0160|consen 480 --------SRTDFRVAHYAGDVTYDTEGFLEKNRDYVSDELIDLLLASDCHFVAGLAPPLRADSSAKSKRSTVGSQFKLQ 551 (862)
T ss_pred --------CcCCcccccccCccccchhhhccCCccccCHHHHhhhhhcccchHHHhccchhcchhhhhhcccHHHHHHHH
Confidence 45679999999999999999999999999999999999999999999998432 3567999999999
Q ss_pred ccC------CCCceeEEEecccCCCCCCCCcc------------------------------------ccccccC-----
Q psy18109 390 ILG------SSTLKYSILKVCPNIVDRPSMDE------------------------------------IKLCCRG----- 422 (602)
Q Consensus 390 l~~------~t~phy~IRCIKPN~~k~p~~fd------------------------------------yk~L~~g----- 422 (602)
|.. +|+||| |||||||+.+.|..|| |.+|.+.
T Consensus 552 l~~Lm~~l~~t~phy-ircikPn~~~~p~~fe~~~v~~Qlr~~GvLetiRiS~~g~P~r~~~~Ef~~r~~~L~~~~~~~~ 630 (862)
T KOG0160|consen 552 LISLMETLNSTPPHY-IRCIKPNAEKKPQIFENNLVLQQLRCCGVLETIRISCAGFPTRWTFIEFVNRYGILMPNDSASD 630 (862)
T ss_pred HHHHHHHhcCCCCCC-ceeeCcchhcccccccccceeeeccccceehhheeccccCCccccHHHHHHHHhhcCcchhccc
Confidence 876 999999 9999999999999999 3444330
Q ss_pred ------------Cc-------------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy18109 423 ------------SV-------------DVSVFELEEFRRDRLVDLAVLIQKVWRGYHQRKDFLKRKRSQIIIASAWRSWR 477 (602)
Q Consensus 423 ------------gv-------------~~tlf~LE~~R~~~l~~~A~~IQk~~Rg~~aRk~y~k~r~aai~IQ~~~R~~~ 477 (602)
|. ...+..||.+|...+...++.||+.+|||..|++|.++|++++.||+.+||+.
T Consensus 631 ~~~~~~~il~~~~~~~yq~g~tkif~r~gq~~~le~~R~~vl~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~ 710 (862)
T KOG0160|consen 631 DLSLCKVILEKLGLELYQIGKTKIFLRAGQIAVLEARRSDVLSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVL 710 (862)
T ss_pred chHHHHHHHHHhchhceeeeeeeeeeccchhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Confidence 00 11255899999999999999999999999999999999999999999999998
Q ss_pred hhh
Q psy18109 478 FVP 480 (602)
Q Consensus 478 ~r~ 480 (602)
.|+
T Consensus 711 ~r~ 713 (862)
T KOG0160|consen 711 ARR 713 (862)
T ss_pred HHH
Confidence 887
No 22
>KOG4229|consensus
Probab=100.00 E-value=5e-61 Score=554.33 Aligned_cols=370 Identities=33% Similarity=0.489 Sum_probs=331.0
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCchhhHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATS-PHLDDKACFLRTRKACEALGFTPDEILDIFKVV 79 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~-~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~il 79 (602)
.+++|++.++++.+.| ..+++|.||+++.+. .+ ++.+|.++|..+..||+++||+.+++.+||+++
T Consensus 255 ~~~agl~~~e~~~~~l-~~~e~y~yL~~~~~~------------~~~d~~~~~~~~~~l~~~m~v~~f~~~~~~si~~~l 321 (1062)
T KOG4229|consen 255 YLLAGLSENELKAFVL-GEAENYEYLEQGALF------------TISDGEDDVAQFIRLEAAMSVVGFTDKVLGSIFKSL 321 (1062)
T ss_pred hheeccchhhhhHHhh-cCCCCHHHhhccccc------------cccchHHHHHhHHHHHHHHHHhccchhHHHHHHHhc
Confidence 3789999999999999 789999999999986 66 899999999999999999999999999999999
Q ss_pred HHHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHH
Q psy18109 80 ASVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVT 159 (602)
Q Consensus 80 AaILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~ 159 (602)
|||||+|||+|...... ..+.+.|.++..+..+|.||.++.+.|.+++|.++. .+ ++|.+..++++++|...
T Consensus 322 a~il~~gni~~~~~~~~-~~d~~~v~~~~~v~~vA~lL~~~~~~l~~alt~~~~--~~-----~ge~~~~~l~~~~A~d~ 393 (1062)
T KOG4229|consen 322 AAILHIGNISYIKFALD-QQDSAEVENEEAVERVACLLLIKEKLLQEALTARVN--VT-----RGELLLAPLLVERAVDV 393 (1062)
T ss_pred ccceeecceeHHhhhcc-cccchhcccchHHHHHHHHhhcCHHHhhhhhcccce--ee-----ehhhhhhhhhHHHhccC
Confidence 99999999999875443 457788999999999999999999999999999999 77 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCCC-CceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHH
Q psy18109 160 RNSLCKALYSRLFTYIVNRTNKAVKVKPSG-KRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLRE 238 (602)
Q Consensus 160 RDaLaK~LY~rLF~wiV~~IN~~l~~~~~~-~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~ 238 (602)
|||+||+||+|||.|||.+||..+...... ....||||||||||+|+ .|||||+|||||||+||++|++|+|..
T Consensus 394 rda~ak~ly~~lf~~iv~rIn~~~~~~~~~~~~~~IgiLdiFgfE~f~-----~nsfEq~~in~Ane~lQ~~fnqhIf~~ 468 (1062)
T KOG4229|consen 394 RDAMAKTLYGRLFDWIVLRINAALSPESDISDILSIGILDIFGFENFE-----RNSFEQLCINLANEQLQYYFNQHIFAL 468 (1062)
T ss_pred chHHHHHHHHHHHHHHHhhHHhccCccccccccceeehhhhhcccchh-----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999866542 34699999999999999 999999999999999999999999999
Q ss_pred HHHHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccCC
Q psy18109 239 EQEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLST 313 (602)
Q Consensus 239 eqeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~~ 313 (602)
||+||..|+|.|.+|.|.||..++|+|..+|.||+.+|||++ +|.+++.|++..++.+..|..++.
T Consensus 469 Eq~ey~~e~I~w~~i~~~dN~~~ldli~~kp~gil~liDees~fP~~td~tl~~k~~~q~~~~~~y~~~k~--------- 539 (1062)
T KOG4229|consen 469 EQEEYDNESIDWRNIEFADNRRRLDLISPKPMGILSLIDEESRFPKATDQTLLLKLNMQHGSNNLYVFPKS--------- 539 (1062)
T ss_pred hHHHhhhcCCCeeeeeeeeccchhhhhccCccchhheecccCcCCchHHHHHHHHhhhhhhcccccccccc---------
Confidence 999999999999999999999999999999999999999999 999999999999998877765522
Q ss_pred CCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC-----------------
Q psy18109 314 PSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET----------------- 376 (602)
Q Consensus 314 ~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~----------------- 376 (602)
.....|.|.||||.|.|++.||+|||+|.++.|+..++..|.+.+++.++....
T Consensus 540 ---------~~e~~f~I~Hyagkv~y~~~~flekNrD~~~~d~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ra~~~~~~ 610 (1062)
T KOG4229|consen 540 ---------RVETVFGITHYAGKVQYNIRGFLEKNRDTVRNDLVNLLRSSDESLLRQLVNGDPTAVSRWFELRALKVAMP 610 (1062)
T ss_pred ---------cccceeeeeeecceehhhhhhHHHhhhhhhhhhHHhhcccccchhhcccCCCCCccCCcchhhhhhccccc
Confidence 235689999999999999999999999999999999999999999988875321
Q ss_pred -------CC---------------------CCCccchhhccccC------CCCceeEEEecccCCCCCCCCcc
Q psy18109 377 -------RV---------------------PEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDE 415 (602)
Q Consensus 377 -------~r---------------------~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd 415 (602)
.+ +.+++.+++-++.+ +..+|+ .|||++|..-.+..++
T Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~s~l~rg~~~~-~~~i~~~~~~~~~q~~ 682 (1062)
T KOG4229|consen 611 VPLEVTLRRPVRKTLTADSSRSAPETTNCLPDKVLPEDRPSLFEELSALARGQDHF-MRAISQNPRYALEQGS 682 (1062)
T ss_pred ccchhhhccccccccccccccchHHHHHhhhccccccCChhhhcchhhcCCCccch-hhhhhcCchhhhhhcC
Confidence 00 11233333334333 666999 9999999988777766
No 23
>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT). Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex
Probab=99.53 E-value=2.9e-15 Score=147.86 Aligned_cols=95 Identities=27% Similarity=0.477 Sum_probs=85.7
Q ss_pred HHHHHhhhhhhhHHhhhhhhhhhh------hhhhhhhhceecccceeEEEeccCCCcEEEEEecCCCCCCCCCcCccccC
Q psy18109 470 ASAWRSWRFVPILFVLSTSSMLIL------DHRTLQIKYRVPASEIYRLSLSPYLDDIAVFHIRAPSPSSCSDASSSFLG 543 (602)
Q Consensus 470 Q~~~R~~~~r~r~l~lt~~ai~il------d~~k~~~krri~l~~I~~vs~S~~~D~~~v~h~~~~~~~~~~~~~~~~~~ 543 (602)
++.-|+++.++|.+++|++++|++ ++.++++|++||+.+|++|||||++|++||||++.
T Consensus 57 ~K~nr~~K~~~R~livT~~~iY~l~~~~~~~~~~~~~kr~i~l~~I~~IsvS~~~D~~~vihv~~--------------- 121 (199)
T PF06017_consen 57 QKYNRRNKPQPRILIVTDKAIYLLDQRKVKDPKKYKLKRRIPLSDITGISVSPLSDNFFVIHVPG--------------- 121 (199)
T ss_pred EEecCCCCccceEEEEeCCeEEEEEEeecCCceeeEEEeccCcccccEEEEccCCCCEEEEEECC---------------
Confidence 344478889999999999999999 55568999999999999999999999999999965
Q ss_pred CCCCCCccccCccccccccccccCCCcccccCchhHHHHHHHHHHHHHhCCCCccccCC
Q psy18109 544 GGGGGTHHHHHQMGCLFHSEVHGKGDFVFQTGHVIEIVTKLFLVIQNAVGKPPEVNIAP 602 (602)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~e~~~~l~~~~~~~~~~~~~v~~~~ 602 (602)
+||+++.+++.+|+||+|+.++++++|++++|+|++
T Consensus 122 -----------------------~~D~il~~~~k~Elv~~L~~~~~~~~~~~l~v~~~~ 157 (199)
T PF06017_consen 122 -----------------------EGDLILESDFKTELVTILCKAYKKATGKKLPVNFSD 157 (199)
T ss_pred -----------------------CCCEEEEeCcHHHHHHHHHHHHHHHhCCceeEEEec
Confidence 456689999999999999999999999999999864
No 24
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=97.50 E-value=0.00013 Score=45.69 Aligned_cols=21 Identities=43% Similarity=0.843 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy18109 440 VDLAVLIQKVWRGYHQRKDFL 460 (602)
Q Consensus 440 ~~~A~~IQk~~Rg~~aRk~y~ 460 (602)
+.+|+.||+.||||++|++|+
T Consensus 1 ~~aai~iQ~~~R~~~~Rk~~k 21 (21)
T PF00612_consen 1 RKAAIIIQSYWRGYLARKRYK 21 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcC
Confidence 367899999999999999885
No 25
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=96.82 E-value=0.0012 Score=43.57 Aligned_cols=22 Identities=45% Similarity=0.893 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy18109 439 LVDLAVLIQKVWRGYHQRKDFL 460 (602)
Q Consensus 439 l~~~A~~IQk~~Rg~~aRk~y~ 460 (602)
...+|+.||+.||||++|++|+
T Consensus 2 ~~~aa~~IQa~~Rg~~~r~~y~ 23 (26)
T smart00015 2 LTRAAIIIQAAWRGYLARKRYK 23 (26)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 3567899999999999999884
No 26
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=96.07 E-value=0.0062 Score=38.09 Aligned_cols=20 Identities=30% Similarity=0.534 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHhhhhhhhH
Q psy18109 463 KRSQIIIASAWRSWRFVPIL 482 (602)
Q Consensus 463 r~aai~IQ~~~R~~~~r~r~ 482 (602)
++|++.||++||+|++|+++
T Consensus 1 ~~aai~iQ~~~R~~~~Rk~~ 20 (21)
T PF00612_consen 1 RKAAIIIQSYWRGYLARKRY 20 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhc
Confidence 35789999999999999876
No 27
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=94.86 E-value=0.022 Score=37.50 Aligned_cols=21 Identities=33% Similarity=0.520 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhH
Q psy18109 462 RKRSQIIIASAWRSWRFVPIL 482 (602)
Q Consensus 462 ~r~aai~IQ~~~R~~~~r~r~ 482 (602)
+..+++.||++||||+.|+++
T Consensus 2 ~~~aa~~IQa~~Rg~~~r~~y 22 (26)
T smart00015 2 LTRAAIIIQAAWRGYLARKRY 22 (26)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 466789999999999999987
No 28
>KOG0160|consensus
Probab=94.76 E-value=0.079 Score=62.47 Aligned_cols=67 Identities=21% Similarity=0.138 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhhhhhhhhhhhce
Q psy18109 436 RDRLVDLAVLIQKVWRGYHQRKDFLKRKRSQIIIASAWRSWRFVPILFVLSTSSMLILDHRTLQIKYR 503 (602)
Q Consensus 436 ~~~l~~~A~~IQk~~Rg~~aRk~y~k~r~aai~IQ~~~R~~~~r~r~l~lt~~ai~ild~~k~~~krr 503 (602)
-.....+++.||+.+||+++|+... ...|++.||+.||++..|+++..+...++.+....+..++|+
T Consensus 692 f~~~r~~~~~~Q~~~rG~~~r~~~~-~~~aai~~q~~~r~~~~r~~y~~~~~~~~~~qs~~r~~~~r~ 758 (862)
T KOG0160|consen 692 FLQLRSAVIIIQAYSRGVLARRETE-REAAAIGIQKECRSYLNRRRYRALIPASITIQSGVRAMLARN 758 (862)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHhhH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3467788889999999999998333 455678899999999999998888877776666555444444
No 29
>KOG0377|consensus
Probab=92.55 E-value=1.1 Score=48.78 Aligned_cols=30 Identities=33% Similarity=0.468 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 432 EEFRRDRLVDLAVLIQKVWRGYHQRKDFLK 461 (602)
Q Consensus 432 E~~R~~~l~~~A~~IQk~~Rg~~aRk~y~k 461 (602)
|-.+..+-.++|+.||+++|+|.+|...++
T Consensus 9 ~~~~s~raikaAilIQkWYRr~~ARle~rr 38 (631)
T KOG0377|consen 9 ELKKSTRAIKAAILIQKWYRRYEARLEARR 38 (631)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445677778899999999999999988764
No 30
>KOG0520|consensus
Probab=89.02 E-value=0.19 Score=59.69 Aligned_cols=52 Identities=29% Similarity=0.357 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhh
Q psy18109 436 RDRLVDLAVLIQKVWRGYHQRKDFLKRKRSQIIIASAWRSWRFVPILFVLST 487 (602)
Q Consensus 436 ~~~l~~~A~~IQk~~Rg~~aRk~y~k~r~aai~IQ~~~R~~~~r~r~l~lt~ 487 (602)
++....+|..||+.+|||..|+.|.-+|.-++.||++.|+|+.|+.|..+|-
T Consensus 806 ~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~w 857 (975)
T KOG0520|consen 806 DRSDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITW 857 (975)
T ss_pred cccchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheech
Confidence 3445678999999999999999999999999999999999999999998883
No 31
>KOG4427|consensus
Probab=87.73 E-value=1 Score=52.03 Aligned_cols=35 Identities=31% Similarity=0.396 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy18109 436 RDRLVDLAVLIQKVWRGYHQRKDFLKRKRSQIIIASAWRSW 476 (602)
Q Consensus 436 ~~~l~~~A~~IQk~~Rg~~aRk~y~k~r~aai~IQ~~~R~~ 476 (602)
+++..++|..||+.||||++|++|+ +.||.-|+..
T Consensus 26 qrrr~~aa~~iq~~lrsyl~Rkk~~------~~I~~e~d~~ 60 (1096)
T KOG4427|consen 26 QRRREAAALFIQRVLRSYLVRKKAQ------IEIQEEFDNL 60 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHh
Confidence 3556789999999999999999875 5666666554
No 32
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=78.82 E-value=0.55 Score=40.49 Aligned_cols=54 Identities=13% Similarity=0.154 Sum_probs=42.5
Q ss_pred HhhhhhhhHHhhhh-hhhhhhhhhhhhhhceecccceeEEEeccCCCcEEEEEecC
Q psy18109 474 RSWRFVPILFVLST-SSMLILDHRTLQIKYRVPASEIYRLSLSPYLDDIAVFHIRA 528 (602)
Q Consensus 474 R~~~~r~r~l~lt~-~ai~ild~~k~~~krri~l~~I~~vs~S~~~D~~~v~h~~~ 528 (602)
+|..+|+|.++||+ ..++.+|+.+..+|..||...+ ++++-..+..-|.+|+++
T Consensus 11 ~glf~kkR~LiLTd~PrL~yvdp~~~~~KgeIp~s~~-~l~v~~~~~~~F~I~Tp~ 65 (89)
T cd01262 11 KGLFAKKRQLILTNGPRLIYVDPVKKVVKGEIPWSDV-ELRVEVKNSSHFFVHTPN 65 (89)
T ss_pred hccccceeeEEEecCceEEEEcCCcCeEEeEeccccc-ceEEEEecCccEEEECCC
Confidence 56678999999998 6788899999999999999983 345544445667778875
No 33
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=66.58 E-value=1 Score=40.06 Aligned_cols=53 Identities=11% Similarity=0.146 Sum_probs=40.1
Q ss_pred HhhhhhhhHHhhhhh-hhhhhhhhhhhhhceecccceeEEEeccCCCcEEEEEecC
Q psy18109 474 RSWRFVPILFVLSTS-SMLILDHRTLQIKYRVPASEIYRLSLSPYLDDIAVFHIRA 528 (602)
Q Consensus 474 R~~~~r~r~l~lt~~-ai~ild~~k~~~krri~l~~I~~vs~S~~~D~~~v~h~~~ 528 (602)
+|...|+|.++||+. .++.+|+.+..+|..||+..-.++.+ -+..-|.||++.
T Consensus 23 kgl~~kkR~liLTd~PrL~Yvdp~~~~~KGeI~~~~~l~v~~--k~~~~F~I~tp~ 76 (104)
T PF14593_consen 23 KGLFAKKRQLILTDGPRLFYVDPKKMVLKGEIPWSKELSVEV--KSFKTFFIHTPK 76 (104)
T ss_dssp ETTEEEEEEEEEETTTEEEEEETTTTEEEEEE--STT-EEEE--CSSSEEEEEETT
T ss_pred eceEEEEEEEEEccCCEEEEEECCCCeECcEEecCCceEEEE--ccCCEEEEECCC
Confidence 344579999999997 99999999999999999996655555 445678889874
No 34
>KOG0942|consensus
Probab=65.85 E-value=6.7 Score=46.52 Aligned_cols=28 Identities=29% Similarity=0.426 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 437 DRLVDLAVLIQKVWRGYHQRKDFLKRKR 464 (602)
Q Consensus 437 ~~l~~~A~~IQk~~Rg~~aRk~y~k~r~ 464 (602)
++..+.|+.+|+.||||+.|++.+..-+
T Consensus 26 rk~e~~av~vQs~~Rg~~~r~~~~~~~R 53 (1001)
T KOG0942|consen 26 RKQEKNAVKVQSFWRGFRVRHNQKLLFR 53 (1001)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 4556789999999999999999887644
No 35
>PTZ00014 myosin-A; Provisional
Probab=61.38 E-value=11 Score=45.30 Aligned_cols=37 Identities=8% Similarity=-0.122 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhhhhhhhhhhhhhh
Q psy18109 463 KRSQIIIASAWRSWRFVPILFVLSTSSMLILDHRTLQ 499 (602)
Q Consensus 463 r~aai~IQ~~~R~~~~r~r~l~lt~~ai~ild~~k~~ 499 (602)
...+..||++||+|+.|+++......++.|+...+..
T Consensus 777 ~~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~ 813 (821)
T PTZ00014 777 EPLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRH 813 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467889999999999999999876655555444433
No 36
>KOG2128|consensus
Probab=58.28 E-value=15 Score=45.63 Aligned_cols=47 Identities=26% Similarity=0.207 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHhhhhhhhHHhhhh
Q psy18109 441 DLAVLIQKVWRGYHQRKDFLKRKR-------SQIIIASAWRSWRFVPILFVLST 487 (602)
Q Consensus 441 ~~A~~IQk~~Rg~~aRk~y~k~r~-------aai~IQ~~~R~~~~r~r~l~lt~ 487 (602)
.-++.+|++.||+++|++|.+..+ +.++||+++|+++.|+++..+..
T Consensus 593 ~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r~~y~~L~~ 646 (1401)
T KOG2128|consen 593 KEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNRKDYKLLFT 646 (1401)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccchHHHHHhc
Confidence 457899999999999999987633 56899999999998888776653
No 37
>KOG0377|consensus
Probab=53.63 E-value=15 Score=40.43 Aligned_cols=24 Identities=33% Similarity=0.423 Sum_probs=18.2
Q ss_pred ccCCCcccccCchhHHHHHHHHHH
Q psy18109 565 HGKGDFVFQTGHVIEIVTKLFLVI 588 (602)
Q Consensus 565 ~~~g~~~~~~~~~~e~~~~l~~~~ 588 (602)
.--||||-+..+-+|++-.||-.+
T Consensus 197 vFNGDFVDRGk~siEvLmiL~a~~ 220 (631)
T KOG0377|consen 197 VFNGDFVDRGKRSIEVLMILFALY 220 (631)
T ss_pred eecCchhhccccchhhHHHHHHHH
Confidence 346888888888899887776543
No 38
>KOG0164|consensus
Probab=53.21 E-value=21 Score=41.61 Aligned_cols=30 Identities=20% Similarity=0.374 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhhh
Q psy18109 464 RSQIIIASAWRSWRFVPILFVLSTSSMLIL 493 (602)
Q Consensus 464 ~aai~IQ~~~R~~~~r~r~l~lt~~ai~il 493 (602)
.-++.||+.|||+.+|.|+..+...++.|-
T Consensus 697 ~lvtllQK~~RG~~~R~ry~rmka~~~ii~ 726 (1001)
T KOG0164|consen 697 SLVTLLQKAWRGWLARQRYRRMKASATIIR 726 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346789999999999999998776554433
No 39
>KOG0520|consensus
Probab=47.43 E-value=24 Score=42.65 Aligned_cols=43 Identities=19% Similarity=0.146 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhhhhhhHHh
Q psy18109 442 LAVLIQKVWRGYHQR--KDFLKRKRSQIIIASAWRSWRFVPILFV 484 (602)
Q Consensus 442 ~A~~IQk~~Rg~~aR--k~y~k~r~aai~IQ~~~R~~~~r~r~l~ 484 (602)
+|+.||..+|-|..- .-|.+|-+|++.||+++|-++++..+..
T Consensus 891 a~t~~e~~yd~yKq~~~~~~~r~~~A~~~VQsm~rs~~a~qqyrR 935 (975)
T KOG0520|consen 891 AATVIEDCYDFYKQLRKQTEERLTRAVVRVQSMFRSPKAQQQYRR 935 (975)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 566777777776665 5566777777777777777776644433
No 40
>KOG4427|consensus
Probab=47.42 E-value=38 Score=39.78 Aligned_cols=40 Identities=18% Similarity=0.213 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHh
Q psy18109 445 LIQKVWRGYHQRKDFLKRKRSQIIIASAWRSWRFVPILFV 484 (602)
Q Consensus 445 ~IQk~~Rg~~aRk~y~k~r~aai~IQ~~~R~~~~r~r~l~ 484 (602)
.+|+.-+.--.|..-++.-+||+.||+.||+|..|+++..
T Consensus 12 fl~k~~qeREer~~qrrr~~aa~~iq~~lrsyl~Rkk~~~ 51 (1096)
T KOG4427|consen 12 FLAKVSQEREERSYQRRREAAALFIQRVLRSYLVRKKAQI 51 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444433333333333334578999999999999997654
No 41
>PF15157 IQ-like: IQ-like
Probab=45.94 E-value=19 Score=30.77 Aligned_cols=20 Identities=45% Similarity=0.782 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy18109 441 DLAVLIQKVWRGYHQRKDFL 460 (602)
Q Consensus 441 ~~A~~IQk~~Rg~~aRk~y~ 460 (602)
.-+..||++||.|++|..+.
T Consensus 48 skvkiiqrawre~lq~qd~~ 67 (97)
T PF15157_consen 48 SKVKIIQRAWREYLQRQDPL 67 (97)
T ss_pred HHHHHHHHHHHHHHHhcCCc
Confidence 44667888888888876643
No 42
>PF07499 RuvA_C: RuvA, C-terminal domain; InterPro: IPR011114 In prokaryotes, RuvA, RuvB, and RuvC process the universal DNA intermediate of homologous recombination, termed Holliday junction. The tetrameric DNA helicase RuvA specifically binds to the Holliday junction and facilitates the isomerization of the junction from the stacked folded configuration to the square-planar structure []. In the RuvA tetramer, each subunit consists of three domains, I, II and III, where I and II form the major core that is responsible for Holliday junction binding and base pair rearrangements of Holliday junction executed at the crossover point, whereas domain III regulates branch migration through direct contact with RuvB. The domain represents the C-terminal domain III of RuvA. This domain plays a significant role in the ATP-dependent branch migration of the hetero-duplex through direct contact with RuvB []. Within the Holliday junction, this domain makes no interaction with the DNA.; GO: 0005524 ATP binding, 0009378 four-way junction helicase activity, 0006281 DNA repair, 0006310 DNA recombination, 0009379 Holliday junction helicase complex; PDB: 1HJP_A 1CUK_A 1C7Y_A 1IXS_A 1IXR_B 1BVS_E 2ZTC_A 2ZTD_B 2H5X_A.
Probab=39.63 E-value=38 Score=25.39 Aligned_cols=25 Identities=16% Similarity=0.206 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCCCchhhHHHHHHH
Q psy18109 55 FLRTRKACEALGFTPDEILDIFKVV 79 (602)
Q Consensus 55 f~~~~~Am~~lGfs~~e~~~I~~il 79 (602)
..++..||..|||++.|+..+.+-+
T Consensus 3 ~~d~~~AL~~LGy~~~e~~~av~~~ 27 (47)
T PF07499_consen 3 LEDALEALISLGYSKAEAQKAVSKL 27 (47)
T ss_dssp HHHHHHHHHHTTS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 5678999999999987776654443
No 43
>PHA01976 helix-turn-helix protein
Probab=35.33 E-value=44 Score=26.32 Aligned_cols=57 Identities=19% Similarity=0.100 Sum_probs=36.3
Q ss_pred HHHHHHHHcCCCchhhHHHHHHHHHHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHh
Q psy18109 57 RTRKACEALGFTPDEILDIFKVVASVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQ 125 (602)
Q Consensus 57 ~~~~Am~~lGfs~~e~~~I~~ilAaILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~ 125 (602)
.++.+.+..|++.++......+-.+ .+.+++ +| -...+.+.+..+|..|||+.+.|.
T Consensus 6 rl~~~R~~~glt~~~lA~~~gvs~~--~v~~~e-------~g---~~~p~~~~l~~ia~~l~v~~~~l~ 62 (67)
T PHA01976 6 QLIKARNARAWSAPELSRRAGVRHS--LIYDFE-------AD---KRLPNLKTLLRLADALGVTLDWLC 62 (67)
T ss_pred HHHHHHHHcCCCHHHHHHHhCCCHH--HHHHHH-------cC---CCCCCHHHHHHHHHHHCcCHHHHh
Confidence 4566777788887776655443222 222322 11 124566779999999999999874
No 44
>cd00934 PTB Phosphotyrosine-binding (PTB) domain. Phosphotyrosine-binding (PTB) domain; PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. The PTB domain of SHC binds to a NPXpY sequence. More recent studies have found that some types of PTB domains such as the neuronal protein X11 and in the cell-fate determinant protein Numb can bind to peptides which are not tyrosine phosphorylated; whereas, other PTB domains can bind motifs lacking tyrosine residues altogether.
Probab=31.50 E-value=83 Score=27.60 Aligned_cols=54 Identities=19% Similarity=0.240 Sum_probs=43.5
Q ss_pred hhhhhHHhhhhhhhhhhhhhhhhhhceecccceeEEEeccCCCcEEEEEecCCC
Q psy18109 477 RFVPILFVLSTSSMLILDHRTLQIKYRVPASEIYRLSLSPYLDDIAVFHIRAPS 530 (602)
Q Consensus 477 ~~r~r~l~lt~~ai~ild~~k~~~krri~l~~I~~vs~S~~~D~~~v~h~~~~~ 530 (602)
..++-.+.++..-+-++|..+..+....|+..|+-.+.-+...++|.+-.+.+.
T Consensus 40 ~~~~v~l~vs~~gv~l~d~~~~~~l~~~~l~~Is~~~~~~~~~~~F~~i~~~~~ 93 (123)
T cd00934 40 KGQKVILSVSSDGVKLIDPKTKEVLASHPIRRISFCAADPDDLRIFAFIAREPG 93 (123)
T ss_pred CCCEEEEEEEcCcEEEEeCCCCcEEEeeccceEEEEECCCCCCcEEEEEEEcCC
Confidence 345567778888888899887777788899999988888877888888887765
No 45
>KOG0942|consensus
Probab=30.93 E-value=76 Score=38.17 Aligned_cols=44 Identities=25% Similarity=0.326 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhh
Q psy18109 435 RRDRLVDLAVLIQKVWRGYHQRKDFLKRKRSQIIIASAWRSWRFVPILFVL 485 (602)
Q Consensus 435 R~~~l~~~A~~IQk~~Rg~~aRk~y~k~r~aai~IQ~~~R~~~~r~r~l~l 485 (602)
|+..++++|..=|+ |..-++.-.+|+++|+.||||..|++...+
T Consensus 8 r~~~l~r~~~er~k-------Ree~rk~e~~av~vQs~~Rg~~~r~~~~~~ 51 (1001)
T KOG0942|consen 8 RDNLLRRAAEERHK-------REEERKQEKNAVKVQSFWRGFRVRHNQKLL 51 (1001)
T ss_pred HHHHHHHHHHHHHh-------hHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 45555555543333 333333334679999999999987765443
No 46
>PF10480 ICAP-1_inte_bdg: Beta-1 integrin binding protein; InterPro: IPR019517 ICAP-1 is a serine/threonine-rich protein that binds to the cytoplasmic domains of beta-1 integrins in a highly specific manner, binding to a NPXY sequence motif on the beta-1 integrin. The cytoplasmic domains of integrins are essential for cell adhesion, and the fact that phosphorylation of ICAP-1 by interaction with the cell-matrix implies an important role of ICAP-1 during integrin-dependent cell adhesion []. Over expression of ICAP-1 strongly reduces the integrin-mediated cell spreading on extracellular matrix and inhibits both Cdc42 and Rac1. In addition, ICAP-1 induces release of Cdc42 from cellular membranes and prevents the dissociation of GDP from this GTPase []. An additional function of ICAP-1 is to promote differentiation of osteoprogenitors by supporting their condensation through modulating the integrin high affinity state [].
Probab=30.10 E-value=29 Score=34.08 Aligned_cols=41 Identities=20% Similarity=0.331 Sum_probs=33.5
Q ss_pred hhhHHhhhhhhhhhhhhhhhhhhceecccceeEEEeccCCCcE
Q psy18109 479 VPILFVLSTSSMLILDHRTLQIKYRVPASEIYRLSLSPYLDDI 521 (602)
Q Consensus 479 r~r~l~lt~~ai~ild~~k~~~krri~l~~I~~vs~S~~~D~~ 521 (602)
.+.++.+++.-+-+.+...+.++.|+||..| +.+..|.|+|
T Consensus 108 eevil~VSKyGiKvt~~d~~~VL~RhpL~~I--vr~V~YdDGl 148 (200)
T PF10480_consen 108 EEVILSVSKYGIKVTDNDQRDVLHRHPLHEI--VRMVCYDDGL 148 (200)
T ss_pred CeEEEEEeeccEEEeecCCcceeeeeeeeeE--EEEEEEecCc
Confidence 4556777777777778777889999999999 5788899997
No 47
>PF08763 Ca_chan_IQ: Voltage gated calcium channel IQ domain; InterPro: IPR014873 Ca2+ ions are unique in that they not only carry charge but they are also the most widely used of diffusible second messengers. Voltage-dependent Ca2+ channels (VDCC) are a family of molecules that allow cells to couple electrical activity to intracellular Ca2+ signalling. The opening and closing of these channels by depolarizing stimuli, such as action potentials, allows Ca2+ ions to enter neurons down a steep electrochemical gradient, producing transient intracellular Ca2+ signals. Many of the processes that occur in neurons, including transmitter release, gene transcription and metabolism are controlled by Ca2+ influx occurring simultaneously at different cellular locales. The pore is formed by the alpha-1 subunit which incorporates the conduction pore, the voltage sensor and gating apparatus, and the known sites of channel regulation by second messengers, drugs, and toxins []. The activity of this pore is modulated by 4 tightly-coupled subunits: an intracellular beta subunit; a transmembrane gamma subunit; and a disulphide-linked complex of alpha-2 and delta subunits, which are proteolytically cleaved from the same gene product. Properties of the protein including gating voltage-dependence, G protein modulation and kinase susceptibility can be influenced by these subunits. Voltage-gated calcium channels are classified as T, L, N, P, Q and R, and are distinguished by their sensitivity to pharmacological blocks, single-channel conductance kinetics, and voltage-dependence. On the basis of their voltage activation properties, the voltage-gated calcium classes can be further divided into two broad groups: the low (T-type) and high (L, N, P, Q and R-type) threshold-activated channels. The voltage-gated calcium channel alpha 1 subunit contains an IQ domain, named for its isoleucine-glutamine (IQ) motif, which interacts with hydrophobic pockets of Ca2+/calmodulin []. The interaction regulates two self-regulatory calcium dependent feedback mechanisms, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF). ; PDB: 3OXQ_F 2F3Z_B 3G43_E 2F3Y_B 2BE6_D 3DVM_B 3BXK_D 2VAY_B 3DVK_B 3BXL_B ....
Probab=29.42 E-value=63 Score=23.10 Aligned_cols=17 Identities=35% Similarity=0.714 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy18109 442 LAVLIQKVWRGYHQRKD 458 (602)
Q Consensus 442 ~A~~IQk~~Rg~~aRk~ 458 (602)
++.+||-+||.|..|+.
T Consensus 11 At~lI~dyfr~~K~rk~ 27 (35)
T PF08763_consen 11 ATLLIQDYFRQFKKRKE 27 (35)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45677777777776654
No 48
>KOG2128|consensus
Probab=27.37 E-value=1.1e+02 Score=38.67 Aligned_cols=47 Identities=19% Similarity=-0.018 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhh
Q psy18109 441 DLAVLIQKVWRGYHQ----RKDFLKRKRSQIIIASAWRSWRFVPILFVLST 487 (602)
Q Consensus 441 ~~A~~IQk~~Rg~~a----Rk~y~k~r~aai~IQ~~~R~~~~r~r~l~lt~ 487 (602)
-...-||..|||++. .....-+...++.+|++.|++.+|+.+.....
T Consensus 566 P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~q 616 (1401)
T KOG2128|consen 566 PFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKLQ 616 (1401)
T ss_pred chHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 346789999999984 22223456677999999999998887766553
No 49
>KOG0162|consensus
Probab=26.83 E-value=88 Score=36.87 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhhhhhhhHHhhhhhhhhhhhhhh
Q psy18109 465 SQIIIASAWRSWRFVPILFVLSTSSMLILDHRT 497 (602)
Q Consensus 465 aai~IQ~~~R~~~~r~r~l~lt~~ai~ild~~k 497 (602)
.|.+||+.||+|.+|+.+..+.+.+.-++..+|
T Consensus 698 ~A~~IQkAWRrfv~rrky~k~ree~t~ll~gKK 730 (1106)
T KOG0162|consen 698 MARRIQKAWRRFVARRKYEKMREEATKLLLGKK 730 (1106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 467899999999999999999987766665543
No 50
>KOG0163|consensus
Probab=26.30 E-value=1.2e+02 Score=35.88 Aligned_cols=25 Identities=28% Similarity=0.365 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 439 LVDLAVLIQKVWRGYHQRKDFLKRK 463 (602)
Q Consensus 439 l~~~A~~IQk~~Rg~~aRk~y~k~r 463 (602)
....++.+|+..|||++|++++..-
T Consensus 812 Rae~v~k~Q~~~Rg~L~rkr~~~ri 836 (1259)
T KOG0163|consen 812 RAECVLKAQRIARGYLARKRHRPRI 836 (1259)
T ss_pred HHHHHHHHHHHHHHHHHHhhhchHH
Confidence 3456788999999999999987543
No 51
>PF10440 WIYLD: Ubiquitin-binding WIYLD domain; InterPro: IPR018848 This entry represents a presumed domain which has been predicted to contain three alpha helices. It was named the WIYLD domain based on the pattern of the ost conserved residues []. This domain appears to be specific to plant SET-domain proteins. ; GO: 0018024 histone-lysine N-methyltransferase activity
Probab=25.14 E-value=1.1e+02 Score=24.96 Aligned_cols=39 Identities=21% Similarity=0.311 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHcCCCchhhHHHHHHHHHHHhhcceeeEe
Q psy18109 53 ACFLRTRKACEALGFTPDEILDIFKVVASVLKLGNVVFIP 92 (602)
Q Consensus 53 ~~f~~~~~Am~~lGfs~~e~~~I~~ilAaILhLGNi~F~~ 92 (602)
..+..-.+||+.+||+++.+..+.+=|--+.- ||-+|.+
T Consensus 9 ~R~daA~dam~~lG~~~~~v~~vl~~LL~lY~-~nW~lIE 47 (65)
T PF10440_consen 9 ERIDAALDAMRQLGFSKKQVRPVLKNLLKLYD-GNWELIE 47 (65)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHc-CCchhhh
Confidence 56777789999999999888877665544332 6766655
No 52
>COG4056 McrC Methyl coenzyme M reductase, subunit C [Coenzyme metabolism]
Probab=25.00 E-value=12 Score=35.59 Aligned_cols=28 Identities=32% Similarity=0.580 Sum_probs=25.2
Q ss_pred HHHcCCCchhhHHHHHHHHHHHhhccee
Q psy18109 62 CEALGFTPDEILDIFKVVASVLKLGNVV 89 (602)
Q Consensus 62 m~~lGfs~~e~~~I~~ilAaILhLGNi~ 89 (602)
=.++|++++|+..|-+==-|+.||||+.
T Consensus 88 g~tfgl~P~Eveqi~rHkl~ViHlGnvk 115 (204)
T COG4056 88 GSTFGLSPEEVEQINRHKLAVIHLGNVK 115 (204)
T ss_pred CCccccCHHHHHHhhhceEEEEEecchH
Confidence 3568999999999999999999999986
No 53
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=24.27 E-value=1.9e+02 Score=36.87 Aligned_cols=89 Identities=12% Similarity=0.186 Sum_probs=57.6
Q ss_pred HHHHHHHHH-HHHHHHHHHHH--HHHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhhhhhhhhhhhce------ecccce
Q psy18109 439 LVDLAVLIQ-KVWRGYHQRKD--FLKRKRSQIIIASAWRSWRFVPILFVLSTSSMLILDHRTLQIKYR------VPASEI 509 (602)
Q Consensus 439 l~~~A~~IQ-k~~Rg~~aRk~--y~k~r~aai~IQ~~~R~~~~r~r~l~lt~~ai~ild~~k~~~krr------i~l~~I 509 (602)
....+..+| ..||....|.. -..+..+...+|+.||.++.++|+..+++..+++....+.+..+| ++...|
T Consensus 815 ~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L~k~~i~~~~~~r~~~a~r~~~e~k~~~~~~ 894 (1463)
T COG5022 815 YLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQRVELAERQLQELKIDVKSI 894 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 445567778 66777666664 334556678899999999999999999988888776654332222 344455
Q ss_pred eEEEeccCCCcEEEEEec
Q psy18109 510 YRLSLSPYLDDIAVFHIR 527 (602)
Q Consensus 510 ~~vs~S~~~D~~~v~h~~ 527 (602)
..++.-+..++-.++.+.
T Consensus 895 ~~l~~~~~~l~~~~~el~ 912 (1463)
T COG5022 895 SSLKLVNLELESEIIELK 912 (1463)
T ss_pred HHHHHHhHHHHHHHHHHh
Confidence 555555555555555443
No 54
>PF00640 PID: Phosphotyrosine interaction domain (PTB/PID) A page on PI domains.; InterPro: IPR006020 The PI domain has a similar structure to the insulin receptor substrate-1 PTB domain, a 7-stranded beta-sandwich, capped by a C-terminal helix. However, the PI domain contains an additional short N-terminal helix and a large insertion between strands 1 and 2, which forms a helix and 2 long connecting loops. The substrate peptide fits into a surface cleft formed from the C-terminal helix and strand 5 [].; GO: 0005515 protein binding; PDB: 1WGU_A 2YT0_A 2YT1_A 2YSZ_A 2ROZ_B 3SO6_A 2DYQ_A 1AQC_A 1X11_B 1WJ1_A ....
Probab=21.16 E-value=1.5e+02 Score=26.65 Aligned_cols=54 Identities=17% Similarity=0.238 Sum_probs=42.9
Q ss_pred hhhhhHHhhhhhhhhhhhhhhhhhhceecccceeEEEe-ccCCCcEEEEEecCCC
Q psy18109 477 RFVPILFVLSTSSMLILDHRTLQIKYRVPASEIYRLSL-SPYLDDIAVFHIRAPS 530 (602)
Q Consensus 477 ~~r~r~l~lt~~ai~ild~~k~~~krri~l~~I~~vs~-S~~~D~~~v~h~~~~~ 530 (602)
...+-.+.++...+-++|+.+..+....|+..|.-.+. .+-...+|.+..+++.
T Consensus 50 ~~~~V~l~vs~~gI~v~~~~t~~~l~~~~i~~Is~~~~~d~~~~~~Fafi~~~~~ 104 (140)
T PF00640_consen 50 KPQKVTLNVSSDGIKVIDPDTGEVLMSHPIRRISFCAVGDPDDKRVFAFIARDPR 104 (140)
T ss_dssp TSEEEEEEEETTEEEEEETTTTCEEEEEEGGGEEEEEESSTTETTEEEEEEEETS
T ss_pred cCeEEEEEEcCCeEEEecCccccccccCCccceEEEEecCCCcceEEEEEeccCC
Confidence 34555777888999999998888889999999999998 7767778888665443
Done!