Query psy18109
Match_columns 602
No_of_seqs 339 out of 1694
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 22:45:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18109.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18109hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kk8_A Myosin heavy chain, str 100.0 1E-112 4E-117 985.2 37.0 439 1-483 287-825 (837)
2 2dfs_A Myosin-5A; myosin-V, in 100.0 1E-110 4E-115 994.9 37.8 432 1-483 264-811 (1080)
3 1w7j_A Myosin VA; motor protei 100.0 1E-110 4E-115 964.3 33.4 415 1-466 264-794 (795)
4 4anj_A Unconventional myosin-V 100.0 2E-109 5E-114 974.8 33.5 497 1-518 250-856 (1052)
5 1i84_S Smooth muscle myosin he 100.0 1E-106 4E-111 976.2 34.0 434 1-481 291-836 (1184)
6 1lkx_A Myosin IE heavy chain; 100.0 6E-107 2E-111 922.2 26.3 380 1-415 204-600 (697)
7 2ycu_A Non muscle myosin 2C, a 100.0 6E-104 2E-108 930.8 33.0 434 1-482 261-806 (995)
8 1g8x_A Myosin II heavy chain f 100.0 7E-103 3E-107 921.0 34.4 426 1-477 283-809 (1010)
9 4db1_A Myosin-7; S1DC, cardiac 100.0 6E-103 2E-107 896.5 30.0 369 1-415 288-685 (783)
10 1w9i_A Myosin II heavy chain; 100.0 1E-102 4E-107 892.3 27.2 363 1-415 283-668 (770)
11 2v26_A Myosin VI; calmodulin-b 100.0 1E-102 4E-107 898.0 27.0 392 1-415 246-677 (784)
12 2ix7_C Myosin-5A; contractIle 99.0 3.5E-10 1.2E-14 88.4 7.0 50 438-487 3-52 (58)
13 1n2d_C IQ2 and IQ3 motifs from 98.9 2.5E-09 8.5E-14 80.2 5.3 44 440-483 3-48 (48)
14 1wdc_A Scallop myosin; calcium 98.3 9.1E-07 3.1E-11 70.3 5.2 47 435-481 1-50 (64)
15 2bl0_A Major plasmodial myosin 98.1 3.9E-06 1.3E-10 66.5 5.3 44 438-481 2-48 (63)
16 2dfs_A Myosin-5A; myosin-V, in 97.9 2E-05 6.7E-10 94.3 8.5 49 438-486 814-862 (1080)
17 2ix7_C Myosin-5A; contractIle 96.7 0.0027 9.3E-08 48.9 5.7 34 431-464 19-52 (58)
18 1n2d_C IQ2 and IQ3 motifs from 95.8 0.01 3.5E-07 43.8 4.5 21 439-459 27-47 (48)
19 2kxw_B Sodium channel protein 94.4 0.012 4.2E-07 38.3 1.1 18 440-457 6-23 (27)
20 2l53_B CAM, voltage-gated sodi 94.3 0.028 9.6E-07 37.8 2.7 19 440-458 6-24 (31)
21 2kxw_B Sodium channel protein 88.1 0.24 8.3E-06 32.2 1.9 17 464-480 7-23 (27)
22 2l53_B CAM, voltage-gated sodi 87.2 0.32 1.1E-05 32.6 2.1 17 465-481 8-24 (31)
23 3gn4_A Myosin-VI; unconvention 85.9 1.4 4.7E-05 40.3 6.4 23 440-462 45-67 (148)
24 4dck_A Sodium channel protein 77.3 2.3 8E-05 39.7 4.7 27 435-461 125-151 (168)
25 1kk8_A Myosin heavy chain, str 70.8 3.7 0.00013 47.8 5.2 43 453-495 769-813 (837)
26 1w1g_A HPDK1, 3-phosphoinositi 70.1 0.78 2.7E-05 42.2 -0.5 53 474-528 62-115 (151)
27 3gn4_A Myosin-VI; unconvention 63.7 15 0.00051 33.5 6.6 22 463-484 45-66 (148)
28 1w7j_A Myosin VA; motor protei 62.8 6.1 0.00021 45.7 4.9 35 453-487 758-792 (795)
29 1wdc_A Scallop myosin; calcium 54.7 13 0.00044 28.6 4.1 35 461-495 4-40 (64)
30 2bl0_A Major plasmodial myosin 51.5 12 0.00041 28.7 3.4 35 461-495 2-38 (63)
31 1i84_S Smooth muscle myosin he 44.4 18 0.00063 43.6 5.2 43 453-495 782-826 (1184)
32 2ou3_A Tellurite resistance pr 41.6 47 0.0016 30.0 6.4 32 46-77 42-73 (161)
33 3dvk_B Voltage-dependent R-typ 39.6 16 0.00055 22.7 1.8 14 466-479 9-22 (23)
34 4dck_A Sodium channel protein 38.8 15 0.0005 34.3 2.4 20 465-484 132-151 (168)
35 3dve_B Voltage-dependent N-typ 32.8 19 0.00066 22.3 1.4 16 465-480 7-22 (23)
36 3bxl_B CAM, voltage-dependent 28.5 34 0.0011 21.8 2.0 17 465-481 4-20 (26)
37 1n45_A Heme oxygenase 1, HO-1; 22.5 1.7E+02 0.0057 28.2 7.0 38 47-84 170-208 (233)
38 3f6w_A XRE-family like protein 21.5 62 0.0021 25.0 3.0 61 57-129 18-78 (83)
39 1sfx_A Conserved hypothetical 20.3 99 0.0034 24.7 4.2 50 55-128 6-55 (109)
No 1
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=100.00 E-value=1.1e-112 Score=985.15 Aligned_cols=439 Identities=28% Similarity=0.455 Sum_probs=394.2
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|++++++++|+|+.++++|+||+++.. .++++||+++|++|++||++|||+++|+.+||+|||
T Consensus 287 qLlaG~~~~~~~~l~L~~~~~~y~yL~~g~~-------------~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~i~~ilA 353 (837)
T 1kk8_A 287 QICSNAIPELNDVMLVTPDSGLYSFINQGCL-------------TVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTA 353 (837)
T ss_dssp HHTSCSSGGGHHHHTCCSCGGGCTTTCSSCS-------------CBTTBCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHhCCCCChhhcccccCCCc-------------ccCCcChHHHHHHHHHHHHhcCcCHHHHHHHHHHHH
Confidence 7999999999999999878999999999875 789999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|.+..+ .+.+.+.+.+.++.+|+||||++++|.++||+|++ .+ ++|.++++++++||.++|
T Consensus 354 aILhLGNi~F~~~~~---~~~~~~~~~~~l~~~a~LLgv~~~~L~~aL~~~~~--~~-----~~e~v~~~~~~~qA~~~r 423 (837)
T 1kk8_A 354 SILHMGEMKFKQRPR---EEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKV--KV-----GTEMVTKGQNMNQVVNSV 423 (837)
T ss_dssp HHHHHTTCCEEC-------CCCEESCSHHHHHHHHHHTSCHHHHHHHHHSCEE--C---------CEECCCCHHHHHHHH
T ss_pred HHHhhccceEEecCC---CCccccCCHHHHHHHHHHHCCCHHHHHHHhcCcEE--Ec-----CCceEEeCCCHHHHHHHH
Confidence 999999999987532 35678999999999999999999999999999999 88 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||+|||+|||++||++|..+ .....+||||||||||+|+ .|||||||||||||||||+|++++|+.||
T Consensus 424 dalaK~lY~rLF~wlV~~IN~~l~~~-~~~~~~IGvLDI~GFE~f~-----~NsFEQlcINyaNEkLQq~Fn~~~f~~Eq 497 (837)
T 1kk8_A 424 GALAKSLYDRMFNWLVRRVNKTLDTK-AKRNYYIGVLDIAGFEIFD-----FNSFEQLCINYTNERLQQFFNHHMFILEQ 497 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCEEEEEEECCCCCCCS-----SBCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC-CCCcceEEEEecCCccccc-----cccHHHHHHHHhhHHHHHHHHHhhhHHHH
Confidence 99999999999999999999999843 3345899999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccc-cChHHHHHHHhcCcccccccccccC-----CHHHHHHHH-hhccCCCCCCcCCCCCCCCCccCC
Q psy18109 241 EEYRRENIEWCYVEF-FNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKL-GSYSSSLTPERGRGGVRTPGVLST 313 (602)
Q Consensus 241 eeY~~EGI~w~~i~~-~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl-~~~~~~~~~~~~~~~~~~p~~~~~ 313 (602)
+||++|||+|++|+| .||++|+||||+ |.|||+|||||| ||.+|++|| ++++++|++|.+++.
T Consensus 498 eeY~~EgI~w~~i~f~~dn~~~idLiek-p~GIlslLDEec~~p~~tD~tf~~kl~~~~~~~~~~f~~p~~--------- 567 (837)
T 1kk8_A 498 EEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGK--------- 567 (837)
T ss_dssp HHHHHTTCCCCSCCCCHHHHHHHHHHHS-TTSHHHHHHHHTTCTTCCHHHHHHHHHHHHTTTCSSEECCCS---------
T ss_pred HHhhhcCCceeecccccCHHHHHHHHhc-CCcHHHHHHHHhcCCCCChHHHHHHHHHHhcCCCcCccCCCc---------
Confidence 999999999999999 599999999998 899999999999 999999996 567899999987642
Q ss_pred CCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC---------C----CCC
Q psy18109 314 PSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET---------R----VPE 380 (602)
Q Consensus 314 ~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~---------~----r~~ 380 (602)
. ..+......|+|+||||+|+|+++||+|||+|+|++|++++|++|++++|+.||+... + +++
T Consensus 568 ---~-~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~Lf~~~~~~~g~~~~~k~~~~~~~ 643 (837)
T 1kk8_A 568 ---P-TRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKGKSSAFQ 643 (837)
T ss_dssp ---C-SSTTCCCCSEEEEETTEEEEECCSSHHHHHSCCCCHHHHHHHHTCSSHHHHHHTCC------------------C
T ss_pred ---c-ccccccCCceEEeeccCcccccHHHHHHhccccccHHHHHHHHhchHHHHHHHhcccccccCCCCCCCCCCCCCC
Confidence 0 0012246789999999999999999999999999999999999999999999997521 1 267
Q ss_pred CccchhhccccC------CCCceeEEEecccCCCCCCCCcc------------------------------------ccc
Q psy18109 381 AQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDE------------------------------------IKL 418 (602)
Q Consensus 381 Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd------------------------------------yk~ 418 (602)
||+++||.||.. +|+||| |||||||+.|.|+.|| |++
T Consensus 644 Tv~~~fk~sL~~Lm~~L~~t~phf-VRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R~~f~eF~~RY~~ 722 (837)
T 1kk8_A 644 TISAVHRESLNKLMKNLYSTHPHF-VRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSI 722 (837)
T ss_dssp CHHHHHHHHHHHHHHHHTTEEEEE-EEEECCCSSCCTTCCCHHHHHHHHTTSSSCC-----CCCSCEEEEHHHHHHHHGG
T ss_pred chHHHHHHHHHHHHHHHHccCCee-eeeeCCCccCCcccccchheeeeccccCccHHHHHHHHhccccccHHHHHHHHHH
Confidence 999999999987 999999 9999999999999999 788
Q ss_pred cccC-----------------------------Cc------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q psy18109 419 CCRG-----------------------------SV------DVSVFELEEFRRDRLVDLAVLIQKVWRGYHQRKDFLKR- 462 (602)
Q Consensus 419 L~~g-----------------------------gv------~~tlf~LE~~R~~~l~~~A~~IQk~~Rg~~aRk~y~k~- 462 (602)
|++. |. ..+++.||++|++++..+|+.||++||||++|++|++|
T Consensus 723 L~~~~~~~~~~d~k~~~~~ll~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~~~~~iQa~~Rg~l~R~~~~k~~ 802 (837)
T 1kk8_A 723 LAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQ 802 (837)
T ss_dssp GSGGGCCC---CHHHHHHHHHHHHTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccccCCCCHHHHHHHHHHHcCCCccceeecCEEEEehhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8752 11 12377899999999999999999999999999999999
Q ss_pred --HHHHHHHHHHHHhhhhhhhHH
Q psy18109 463 --KRSQIIIASAWRSWRFVPILF 483 (602)
Q Consensus 463 --r~aai~IQ~~~R~~~~r~r~l 483 (602)
|.|+++||++||+|..|+.|.
T Consensus 803 ~~r~a~~~IQ~~~R~~~~~r~~~ 825 (837)
T 1kk8_A 803 DQRIGLSVIQRNIRKWLVLRNWQ 825 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHHHcchH
Confidence 678899999999999888653
No 2
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=100.00 E-value=1.1e-110 Score=994.89 Aligned_cols=432 Identities=30% Similarity=0.497 Sum_probs=392.7
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|++++++++|+| .++++|+||++|+++ .++++||+++|..|+.||++|||+++|+.+||+|||
T Consensus 264 qllag~~~~~~~~l~L-~~~~~y~yl~~~~~~------------~~~~~dD~~~f~~~~~A~~~lg~~~~e~~~i~~ila 330 (1080)
T 2dfs_A 264 QLCASAALPEFKTLRL-GNANYFHYTKQGGSP------------VIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILA 330 (1080)
T ss_dssp HHHHTTTSSGGGGTCC-CCTTTCTTTSTTSCC------------SCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHcCCChHHHHHccC-CCHHhcCcccCCCCC------------CCCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 6899999999999999 789999999999986 789999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceee-cChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTV-SNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVT 159 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i-~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~ 159 (602)
||||||||+|... +.+.|.+ .+++.++.+|.||||++++|.++||+|++ .+ ++|.++++++++||.++
T Consensus 331 aILhLGni~F~~~----~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~--~~-----~~e~i~~~~~~~qa~~~ 399 (1080)
T 2dfs_A 331 GILHLGNVEFASR----DSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKL--AT-----ATETYIKPISKLHAINA 399 (1080)
T ss_dssp HHHHHTTCCCEEE----TTTEEECCSSCHHHHHHHHHHTCCHHHHHHHHHEEEE--CC---------EEEECCHHHHHHH
T ss_pred HHHhccCceEEec----CCcceeecCChHHHHHHHHHhCCCHHHHHHHhcccEE--Ee-----CCceEEeCCCHHHHHHH
Confidence 9999999999874 3356777 67889999999999999999999999999 88 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHH
Q psy18109 160 RNSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREE 239 (602)
Q Consensus 160 RDaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~e 239 (602)
||||||+||+|||+|||.+||.+|..+.. ...+||||||||||+|+ .|||||||||||||||||+|++++|+.|
T Consensus 400 rdalak~lY~~LF~wlV~~iN~~l~~~~~-~~~~IgvLDI~GFE~f~-----~NsFEQlcINy~NEkLQq~F~~~~f~~E 473 (1080)
T 2dfs_A 400 RDALAKHIYANLFNWIVDHVNKALHSTVK-QHSFIGVLDIYGFETFE-----INSFEQFCINYANEKLQQQFNMHVFKLE 473 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSSC-CCEEEEEEEECCCCCCS-----SBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccc-cCceEEeeccCCccccC-----cCCHHHHHHHhhhHHHHHHHHHHhhHHH
Confidence 99999999999999999999999986543 45799999999999999 9999999999999999999999999999
Q ss_pred HHHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhcc-CCCCCCcCCCCCCCCCccCC
Q psy18109 240 QEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYS-SSLTPERGRGGVRTPGVLST 313 (602)
Q Consensus 240 qeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~-~~~~~~~~~~~~~~p~~~~~ 313 (602)
|+||.+|||+|++|+|+||++||||||++ .|||+|||||| ||.+|++||++.+ ++|++|.+|+.
T Consensus 474 qeeY~~EgI~w~~i~f~dn~~~idlie~~-~Gil~lLdee~~~p~~tD~~f~~kl~~~~~~~~~~f~~p~~--------- 543 (1080)
T 2dfs_A 474 QEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRL--------- 543 (1080)
T ss_dssp HHHHHHHTCCTTCCCCCCCHHHHHHHHST-TSHHHHHHHHTTSTTCCHHHHHHHHHHHHBTTBSSEECCTT---------
T ss_pred HHHHhhcCCccccccccccHHHHHHHhcC-CceeeeccccccCCCCChHHHHHHHHHHhhcCCCCccCCCC---------
Confidence 99999999999999999999999999997 89999999999 9999999999987 99999977632
Q ss_pred CCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcC-ccccccccccCCC----------------
Q psy18109 314 PSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTS-QHPLLKHLFPEET---------------- 376 (602)
Q Consensus 314 ~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S-~~~~i~~lf~~~~---------------- 376 (602)
....|+|+||||+|+|++.||+|||+|+|++|++.+|++| +++||+.||+...
T Consensus 544 ----------~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~~v~~lf~~~~~~~~~~~~~~s~~~~~ 613 (1080)
T 2dfs_A 544 ----------SNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPL 613 (1080)
T ss_dssp ----------CSSEEEEECSSCEEEEECTTHHHHHBCCCCHHHHHHHHTCSSCSHHHHSCC-------------------
T ss_pred ----------CCCceEEEecceEEEEehhhHHHhccccccHHHHHHHHcccccHHHHHHhcccccccccccccccccccc
Confidence 3578999999999999999999999999999999999999 9999999997421
Q ss_pred -----------------CCCCCccchhhccccC------CCCceeEEEecccCCCCCCCCcc------------------
Q psy18109 377 -----------------RVPEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDE------------------ 415 (602)
Q Consensus 377 -----------------~r~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd------------------ 415 (602)
++++||+++||.||.. +|+||| |||||||+.|.|+.||
T Consensus 614 ~~~~~~~~~~~~~~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~phf-VRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~ir 692 (1080)
T 2dfs_A 614 SRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHY-VRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIR 692 (1080)
T ss_dssp ------------------CCCBHHHHHHHHHHHHHHHHHSSEEEE-EEEECCCSSCCTTCCCHHHHHHHHHTTTHHHHHH
T ss_pred cccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhcCCee-EEEecCCCCCCchhcCHHhhHHHHhhcccHHHHh
Confidence 3467999999999988 999999 9999999999999999
Q ss_pred ------------------ccccccC---------------------------Cc------ccchhhHHHHHHHHHHHHHH
Q psy18109 416 ------------------IKLCCRG---------------------------SV------DVSVFELEEFRRDRLVDLAV 444 (602)
Q Consensus 416 ------------------yk~L~~g---------------------------gv------~~tlf~LE~~R~~~l~~~A~ 444 (602)
|++|++. |. ...++.||++|..++..+|+
T Consensus 693 i~r~Gyp~R~~~~eF~~RY~~L~~~~~~~~d~k~~~~~il~~~~~~~~~~~~G~TKVF~r~g~l~~LE~~R~~~l~~aa~ 772 (1080)
T 2dfs_A 693 ISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACI 772 (1080)
T ss_dssp HHTTSCCEEEEHHHHHHHHTTTSCGGGCCSSHHHHHHHHHTTTSCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCchhhHHHHHHHHHHHCCccCCCCChHHHHHHHHHHhcCChhhheeccccchhccchhhHHHHHHHHHHHHHHH
Confidence 7888762 11 12366899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHH
Q psy18109 445 LIQKVWRGYHQRKDFLKRKRSQIIIASAWRSWRFVPILF 483 (602)
Q Consensus 445 ~IQk~~Rg~~aRk~y~k~r~aai~IQ~~~R~~~~r~r~l 483 (602)
.||++||||++|++|+++|.+++.||++||++.+|+++.
T Consensus 773 ~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~ 811 (1080)
T 2dfs_A 773 RIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYAT 811 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999888888888887777666544
No 3
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=100.00 E-value=1.1e-110 Score=964.34 Aligned_cols=415 Identities=30% Similarity=0.522 Sum_probs=382.0
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|++++++++|+| .++++|+||+++++. .++++||+++|++|++||++|||+++|+.+||+|||
T Consensus 264 qLlag~~~~~~~~l~L-~~~~~y~yl~~~~~~------------~~~~~dD~~~f~~~~~Am~~lG~s~~e~~~i~~ila 330 (795)
T 1w7j_A 264 QLCASAALPEFKTLRL-GNANYFHYTKQGGSP------------VIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILA 330 (795)
T ss_dssp HHHHTTTSGGGGGGCC-CCTTTSHHHHTTSCC------------CCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHccC-CChHhCccccCCCCC------------cCCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 6899999999999999 789999999999986 789999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceee-cChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTV-SNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVT 159 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i-~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~ 159 (602)
||||||||+|.+.+ .+.|.+ .+++.++.+|+||||++++|.++||+|++ .+ ++|.++++++++||.++
T Consensus 331 aILhLGNi~F~~~~----~~~~~v~~~~~~l~~~a~LLgv~~~~L~~aL~~~~~--~~-----~~e~v~~~~~~~qA~~~ 399 (795)
T 1w7j_A 331 GILHLGNVEFASRD----SDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKL--AT-----ATETYIKPISKLHAINA 399 (795)
T ss_dssp HHHHHHTCCCEEEE----TTEEECCTTCHHHHHHHHHHTCCHHHHHHHHSEEEE--EC-----SSCEEEEECCHHHHHHH
T ss_pred HHHhccCceEeecC----CcceeecCChHHHHHHHHHhCCCHHHHHHHhcccEE--Ee-----CCceecCCCCHHHHHHH
Confidence 99999999998742 356777 67889999999999999999999999999 88 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHH
Q psy18109 160 RNSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREE 239 (602)
Q Consensus 160 RDaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~e 239 (602)
||||||+||+|||+|||.+||++|..+.. ...+||||||||||+|+ .|||||||||||||||||+|++++|+.|
T Consensus 400 rdalaK~lY~rLF~wlV~~IN~~l~~~~~-~~~~IGvLDI~GFE~f~-----~NsFEQlcINyaNEkLQq~Fn~~~F~~E 473 (795)
T 1w7j_A 400 RDALAKHIYANLFNWIVDHVNKALHSTVK-QHSFIGVLDIYGFETFE-----INSFEQFCINYANEKLQQQFNMHVFKLE 473 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSSC-CSEEEEEEECCCCCCCS-----SCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcc-ccceEEeeccCcccccC-----cCCHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999986543 35799999999999999 9999999999999999999999999999
Q ss_pred HHHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhcc-CCCCCCcCCCCCCCCCccCC
Q psy18109 240 QEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYS-SSLTPERGRGGVRTPGVLST 313 (602)
Q Consensus 240 qeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~-~~~~~~~~~~~~~~p~~~~~ 313 (602)
|+||++|||+|++|+|+||++||||||++ .|||+|||||| ||.+|++||++.+ ++|++|.+|+.
T Consensus 474 qeeY~~EgI~w~~i~f~DN~~~idLie~~-~GIlslLDEec~~p~~tD~~f~~kl~~~~~~~~~~f~~p~~--------- 543 (795)
T 1w7j_A 474 QEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRL--------- 543 (795)
T ss_dssp HHHHHHTTCCGGGCCCCCCHHHHHHHHST-TSHHHHHHHHHTSTTCCHHHHHHHHHHHHTTTCTTEECCTT---------
T ss_pred HHHHHhcCCcccccCccccHHHHHHHHhc-CCHHHhhhhhccCCCCChHHHHHHHHHHhhccCCccccCCC---------
Confidence 99999999999999999999999999997 99999999999 9999999999988 99999977632
Q ss_pred CCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCc-cccccccccCCC----------------
Q psy18109 314 PSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQ-HPLLKHLFPEET---------------- 376 (602)
Q Consensus 314 ~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~-~~~i~~lf~~~~---------------- 376 (602)
....|+|+||||+|+|+++||+|||+|.|+++++++|++|+ +++|+.||+...
T Consensus 544 ----------~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~~v~~lf~~~~~~~~~~~~~~s~~~~~ 613 (795)
T 1w7j_A 544 ----------SNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPL 613 (795)
T ss_dssp ----------CSSEEEEECSSCEEEEECTTHHHHHHCCCCHHHHHHHHTCSSCSHHHHTTC-------------------
T ss_pred ----------CCCceEEEecceEEEEechhHHhhccccccHHHHHHHHhccccHHHHHHhcccccccccccccccccccc
Confidence 35789999999999999999999999999999999999999 999999996421
Q ss_pred -----------------CCCCCccchhhccccC------CCCceeEEEecccCCCCCCCCcc------------------
Q psy18109 377 -----------------RVPEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDE------------------ 415 (602)
Q Consensus 377 -----------------~r~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd------------------ 415 (602)
++++||+++||.||.. +|+||| |||||||+.|.|+.||
T Consensus 614 s~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phf-VRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~ir 692 (795)
T 1w7j_A 614 SRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHY-VRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIR 692 (795)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHHTSEEEE-EEEECCCTTCCTTCCCHHHHHHHHHHTTHHHHHH
T ss_pred ccccccccccccccccCCCCCcHHHHHHHHHHHHHHHHhcCCCeE-EEEeCCCCcCChhhcCcccccchhhhCChHHHHH
Confidence 3467999999999988 999999 9999999999999999
Q ss_pred ------------------ccccccC---------------------------Cc------ccchhhHHHHHHHHHHHHHH
Q psy18109 416 ------------------IKLCCRG---------------------------SV------DVSVFELEEFRRDRLVDLAV 444 (602)
Q Consensus 416 ------------------yk~L~~g---------------------------gv------~~tlf~LE~~R~~~l~~~A~ 444 (602)
|++|++. |. ...++.||++|++++.++|+
T Consensus 693 i~r~Gyp~R~~f~eF~~RY~~L~~~~~~~~d~k~~~~~il~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~~~~ 772 (795)
T 1w7j_A 693 ISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACI 772 (795)
T ss_dssp HHHHSCCEEEEHHHHHHHHGGGSCGGGCCSCHHHHHHHHHHHHCCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCccccHHHHHHHHHHhCCcccCCCCHHHHHHHHHHHhCCCccceEEcCceEEEchhHHHHHHHHHHHHHHHHHH
Confidence 8888762 11 12367899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy18109 445 LIQKVWRGYHQRKDFLKRKRSQ 466 (602)
Q Consensus 445 ~IQk~~Rg~~aRk~y~k~r~aa 466 (602)
.||++||||++|++|++||+|+
T Consensus 773 ~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 773 RIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999874
No 4
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=100.00 E-value=1.6e-109 Score=974.82 Aligned_cols=497 Identities=26% Similarity=0.350 Sum_probs=404.7
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccC--------C---CC---CCCCCCCCCcchHHHHHHHHHHHHHcC
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHIS--------S---SP---MFSPATSPHLDDKACFLRTRKACEALG 66 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~--------~---~~---~~~~~~~~~~dD~~~f~~~~~Am~~lG 66 (602)
|||+|++++++++|+| .++++|+||+++....... . ++ ..+...++++||+++|.+|+.||++||
T Consensus 250 qLlaGa~~~~r~~l~L-~~~~~y~yL~qg~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~dD~~~f~~~~~Am~~lG 328 (1052)
T 4anj_A 250 RLCAGASEDIRERLHL-SSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIG 328 (1052)
T ss_dssp HHHHHCCHHHHHHHTC-CCGGGCHHHHTSCCCCBCCHHHHTTSCGGGCCHHHHHHCCBCCSSCCHHHHHHHHHHHHHHHT
T ss_pred HHhcCCCHHHHHHcCC-CChHhCchhcCCCccccccccchhhhcccccchhhccCCCccCCCcchHHHHHHHHHHHHHcC
Confidence 7899999999999999 6899999999986421000 0 00 012346789999999999999999999
Q ss_pred CCchhhHHHHHHHHHHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCce
Q psy18109 67 FTPDEILDIFKVVASVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTL 146 (602)
Q Consensus 67 fs~~e~~~I~~ilAaILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~ 146 (602)
|+++|+.+||+|||||||||||+|.+..+.++...+.+.+.+.++.+|+||||++++|.++||+|++ ..+..+.++|.
T Consensus 329 fs~~e~~~I~~iLAaILhLGNi~F~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~aLt~r~~--~~~~~~~~~e~ 406 (1052)
T 4anj_A 329 LDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVM--LTTAGGAKGTV 406 (1052)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCCEEC-------CEECGGGHHHHHHHHHHTTCCHHHHHHHHHEEC--------------
T ss_pred CCHHHHHHHHHHHHHHHhhcceeEEecCCCCCCcccccCChHHHHHHHHHhCCCHHHHHHHHhhcee--eecccccCceE
Confidence 9999999999999999999999998765444333445566778999999999999999999999988 44333448999
Q ss_pred EEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhH
Q psy18109 147 IVTELSAGEATVTRNSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEK 226 (602)
Q Consensus 147 i~~~l~~~qA~~~RDaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEk 226 (602)
+.++++++||.++||||||+||+|||+|||++||.+|.... ...+||||||||||+|+ .||||||||||||||
T Consensus 407 i~~~l~~~qA~~~rDaLAK~LY~rLF~wiV~~IN~~l~~~~--~~~~IGILDI~GFE~f~-----~NsFEQLCINyaNEk 479 (1052)
T 4anj_A 407 IKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFET--SSYFIGVLDIAGFEYFE-----HNSFEQFCINYCNEK 479 (1052)
T ss_dssp -CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSC--CSEEEEEEECCCCCCCS-----SCCHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc--ccceEEEEecCCCcccc-----cCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998643 35799999999999999 999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcC
Q psy18109 227 LHQLFTDVMLREEQEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERG 301 (602)
Q Consensus 227 LQq~f~~~~f~~eqeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~ 301 (602)
|||+|++++|+.||+||.+|||+|++|+|+||++||||||++|.|||++||||| ||++|++||++.+++|++|..
T Consensus 480 LQq~Fn~~vF~~EqeeY~~EgI~w~~I~f~DN~~~idLie~kp~GIl~lLDEe~~~p~~tD~~f~~kl~~~~~~~~~~~~ 559 (1052)
T 4anj_A 480 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSI 559 (1052)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSSCCHHHHHHHHHHTTTTCTTEEC
T ss_pred HHHHHHHhhhHHHHHHHHhcCCCcccCCcCCcHHHHHHHHcCcccHHHHHHHHhcCCCCcHHHHHHHHHHHhccCccccC
Confidence 999999999999999999999999999999999999999999999999999999 999999999999999999977
Q ss_pred CCCCCCCCccCCCCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC-----
Q psy18109 302 RGGVRTPGVLSTPSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET----- 376 (602)
Q Consensus 302 ~~~~~~p~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~----- 376 (602)
++....+ ..++......|+|+||||+|+|+++||+|||+|.|+++++++|++|++++|+.||+...
T Consensus 560 ~~~~~~~---------~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNrD~l~~~~~~ll~~S~~~~i~~Lf~~~~~~~~~ 630 (1052)
T 4anj_A 560 PRKSKLA---------IHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESSTNNNKD 630 (1052)
T ss_dssp GGGCSCS---------TTTTCCTTSEEEEEETTEEEEEECTTHHHHHBCCCCHHHHHHHHTCSCHHHHHTTCC-------
T ss_pred Ccccccc---------cccccCCCCCeEEEcCCccEEEecCChhhhccccccHHHHHHHHhCCcHHHHHhhhcccccccc
Confidence 6331100 11122245679999999999999999999999999999999999999999999998643
Q ss_pred -------CCCCCccchhhccccC------CCCceeEEEecccCCCCCCCCcc----------------------------
Q psy18109 377 -------RVPEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDE---------------------------- 415 (602)
Q Consensus 377 -------~r~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd---------------------------- 415 (602)
.+.+||+++||.||.. +|+||| |||||||+.|.|+.||
T Consensus 631 ~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phf-VRCIkPN~~k~p~~fd~~~V~~QLr~~GvLE~irI~r~Gyp~R~ 709 (1052)
T 4anj_A 631 TKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASF-IRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRA 709 (1052)
T ss_dssp ---------CCBHHHHHHHHHHHHHHHHHTSEEEE-EEEECCCSSCCSSCCCHHHHHHHHHHHTHHHHHHHTTTCCCEEE
T ss_pred ccCCCCCCCCccHHHHHHHHHHHHHHHHcCcCCEE-EEEECCCccCCCCcCCHHHHHHHHHHhhHHHHHHHHhcCCCCcC
Confidence 2346999999999987 999999 9999999999999999
Q ss_pred --------ccccccC---------------------------Cc------ccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 416 --------IKLCCRG---------------------------SV------DVSVFELEEFRRDRLVDLAVLIQKVWRGYH 454 (602)
Q Consensus 416 --------yk~L~~g---------------------------gv------~~tlf~LE~~R~~~l~~~A~~IQk~~Rg~~ 454 (602)
|++|++. |. +.+++.||++|+.++..+|+.||+ +|||+
T Consensus 710 ~f~eF~~RY~~L~~~~~~~~d~k~~~~~iL~~l~l~~~~y~iG~TKVFlr~~~~~~LE~~r~~~~~~~~~~iq~-~r~~l 788 (1052)
T 4anj_A 710 SFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKR-VNHWL 788 (1052)
T ss_dssp EHHHHHHHHHTTSCSSGGGSCHHHHHHHHHHHTSCCGGGEEECSSEEEECTTCHHHHHHHHCCCHHHHHHHHHH-HHHHH
T ss_pred cHHHHHHHHHHhCcccccCCCHHHHHHHHHHHcCcCcccEEecCCEEeeCcCHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 7778762 11 345779999999999999998886 79999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhh----HHhhhhhhhhhhhhhhhhhhceecccceeEEEeccCC
Q psy18109 455 QRKDFLKRKRSQIIIASAWRSWRFVPI----LFVLSTSSMLILDHRTLQIKYRVPASEIYRLSLSPYL 518 (602)
Q Consensus 455 aRk~y~k~r~aai~IQ~~~R~~~~r~r----~l~lt~~ai~ild~~k~~~krri~l~~I~~vs~S~~~ 518 (602)
+|++|++||++++.||+.+|+++.|+. |..+-.+..-++...+....+|-....-.+..+.++.
T Consensus 789 ~r~~~~k~~~~a~~i~~~~r~~~~r~~~~~~w~~l~~~v~pll~~~~~~~~~r~~~~~~~~~~~~~~~ 856 (1052)
T 4anj_A 789 ICSRWKKVQWCSLSVIKLKNKIKYRAEAVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYG 856 (1052)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCEEEEEEEEEEETTEEEEEEEEEEEETTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhhhhhHHHHHHHHHhhhhhccCCccccchHH
Confidence 999999999999999998888765442 2222233334444444455555444444566666653
No 5
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=100.00 E-value=1.2e-106 Score=976.18 Aligned_cols=434 Identities=30% Similarity=0.470 Sum_probs=394.1
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|+++++++.|+| .++++|+||++|.+ .++++||+++|..|+.||++|||+++|+..||+|||
T Consensus 291 qll~g~~~~~~~~l~l-~~~~~~~yl~~~~~-------------~~~~~~d~~~f~~~~~a~~~lg~~~~e~~~i~~ila 356 (1184)
T 1i84_S 291 YLIAGASEQMRNDLLL-EGFNNYTFLSNGHV-------------PIPAQQDDEMFQETLEAMTIMGFTEEEQTSILRVVS 356 (1184)
T ss_dssp HHHHHCCHHHHHHTTC-CCTTSCSSCTTSSC-------------CCTTCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHcCC-CChHhCCccCCCCc-------------CCCCCChHHHHHHHHHHHHhceeCHHHHHHHHHHHH
Confidence 6899999999999999 89999999999876 789999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|.... ..+.+.+.+.+.+..+|.||||++++|.++||+|++ .+ ++|.+++++|++||.++|
T Consensus 357 aiLhlGni~f~~~~---~~~~~~~~~~~~~~~~a~lLg~~~~~l~~~l~~~~~--~~-----~~e~~~~~~~~~~a~~~r 426 (1184)
T 1i84_S 357 SVLQLGNIVFKKER---NTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRI--KV-----GRDVVQKAQTKEQADFAI 426 (1184)
T ss_dssp HHHHTTTCCCBCCT---TTSCCBCCCSHHHHHHHHHTTSCHHHHHHHHHSCCC--CC-----TTSCCCCCCCHHHHHHHH
T ss_pred HHHhhcCceeeccC---CCcCcccCChHHHHHHHHHHCCCHHHHHHHhcCcEE--Ee-----CCceEecCCCHHHHHHHH
Confidence 99999999998753 235678889999999999999999999999999999 88 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||+|||+|||.+||.+|.........+||||||||||+|+ .|||||||||||||||||+|++++|+.||
T Consensus 427 dalak~lY~~lF~wlv~~iN~~l~~~~~~~~~~IgvLDi~GFE~f~-----~NsfeQlciNy~nEkLq~~f~~~~f~~eq 501 (1184)
T 1i84_S 427 EALAKAKFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFE-----INSFEQLCINYTNEKLQQLFNHTMFILEQ 501 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCC------CEEEEEEECCCCCCCS-----SBCHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCccCCcceEEEeecCCcCCCC-----cchHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 9999999999999999999999986534456899999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccc-cChHHHHHHHhcC--cccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccC
Q psy18109 241 EEYRRENIEWCYVEF-FNNSAICDIIETN--SHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLS 312 (602)
Q Consensus 241 eeY~~EGI~w~~i~~-~dN~~~~dLie~~--~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~ 312 (602)
+||.+|||+|++|+| .||++|||||++| |+|||+|||||| ||.+|++||++.+++|++|.+|+.
T Consensus 502 ~ey~~Egi~~~~i~~~~dn~~~~~lie~~~~~~Gil~lLdee~~~p~~td~~~~~kl~~~~~~~~~~~~~~~-------- 573 (1184)
T 1i84_S 502 EEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQ-------- 573 (1184)
T ss_dssp HHHHHHTCSCCCCCCCCCCHHHHHTTSCCSSSCCHHHHHHHTTSCTTCCHHHHHHHHHHHTSSCTTEEECSS--------
T ss_pred HHHHhcCCCccccccCCCcHHHHHHHhCCCCCCCchhhhhhhhCCCCCChHHHHHHHHHHhCCCCCccCCCC--------
Confidence 999999999999999 5999999999984 359999999999 999999999999999999987632
Q ss_pred CCCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC----------------
Q psy18109 313 TPSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET---------------- 376 (602)
Q Consensus 313 ~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~---------------- 376 (602)
......|+|+||||+|+|++.||++||+|+|+++++.+|+.|+++||+.||+...
T Consensus 574 ---------~~~~~~F~i~Hyag~V~Y~~~gfl~kN~d~l~~~~~~ll~~s~~~~~~~lf~~~~~~~~~~~~~~~~~~~~ 644 (1184)
T 1i84_S 574 ---------LKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTESSL 644 (1184)
T ss_dssp ---------CTTTCEEEEECSSCEEEEECTTHHHHHHCCCCHHHHHHHHTCSCHHHHHHHSCCTTCCCC-----------
T ss_pred ---------CCCCCcEEEECCCceEEeccCCchhhccCcccHHHHHHHHhCchHHHHHHhcccccccccccccccccccc
Confidence 0135789999999999999999999999999999999999999999999997521
Q ss_pred --------CCCCCccchhhccccC------CCCceeEEEecccCCCCCCCCcc---------------------------
Q psy18109 377 --------RVPEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDE--------------------------- 415 (602)
Q Consensus 377 --------~r~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd--------------------------- 415 (602)
.+++||+++||.||.. +|+||| |||||||+.|.|+.||
T Consensus 645 ~~~~~~~~~~~~tv~~~f~~~l~~L~~~l~~t~phf-vRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R 723 (1184)
T 1i84_S 645 PSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNF-VRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNR 723 (1184)
T ss_dssp ----------CCCHHHHHHHHHHHHHHHHTTSEEEE-CCEECCCSSCCSSCCCHHHHHHHHHHTTHHHHHHHHHHSCCEE
T ss_pred CccccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCc-eeeeCCCCcCCCCcccHHHHHHHHhhcCchHHHHhHhhcCccc
Confidence 1247999999999987 999999 9999999999999999
Q ss_pred ---------ccccccC----C----------------c---------------ccchhhHHHHHHHHHHHHHHHHHHHHH
Q psy18109 416 ---------IKLCCRG----S----------------V---------------DVSVFELEEFRRDRLVDLAVLIQKVWR 451 (602)
Q Consensus 416 ---------yk~L~~g----g----------------v---------------~~tlf~LE~~R~~~l~~~A~~IQk~~R 451 (602)
|++|++. | + ..+++.||++|..++..+++.||++||
T Consensus 724 ~~~~~F~~ry~~L~~~~~~~~~~d~k~~~~~lL~~l~l~~~~~~iG~TKVF~r~g~l~~LE~~r~~~l~~~~~~iQ~~~R 803 (1184)
T 1i84_S 724 IVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCR 803 (1184)
T ss_dssp EEHHHHHHHTTTTCTTTSCSSCCCHHHHHHHHHHTTTCCTTTCCBCSSEEEECTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhccccCCcCCCCHHHHHHHHHHHcCCCccceeEcCeEEEEechHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7787652 1 1 123668999999999999999999999
Q ss_pred HHHHHHHHHHHH---HHHHHHHHHHHhhhhhhh
Q psy18109 452 GYHQRKDFLKRK---RSQIIIASAWRSWRFVPI 481 (602)
Q Consensus 452 g~~aRk~y~k~r---~aai~IQ~~~R~~~~r~r 481 (602)
||++|++|.+++ .|+++||++||+|..++.
T Consensus 804 g~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~ 836 (1184)
T 1i84_S 804 GYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH 836 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999985 688999999999987764
No 6
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=100.00 E-value=5.9e-107 Score=922.16 Aligned_cols=380 Identities=35% Similarity=0.588 Sum_probs=341.2
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|++++++++|+|.+++++|+||++++++ .++++||+++|++|++||++|||+++|+.+||+|||
T Consensus 204 qllaG~~~~~~~~l~L~~~~~~y~yL~~~~~~------------~~~~~dD~~~f~~~~~Am~~lG~~~~e~~~i~~ila 271 (697)
T 1lkx_A 204 QMLKGLSQSKLDELGLTPNAPAYEYLKKSGCF------------DVSTIDDSGEFKIIVKAMETLGLKESDQNSIWRILA 271 (697)
T ss_dssp HHHTTSCHHHHHHHTCCSCGGGSHHHHHTTCC------------CCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHhcCCCHHHHHHhcCCCChhhCccccCCCCc------------ccCCCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 78999999999999996599999999999986 789999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccC-CCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNN-IDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVT 159 (602)
Q Consensus 81 aILhLGNi~F~~~~~-~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~ 159 (602)
||||||||+|.+... .++.+.|.+.+++.++.+|+||||++++|.++||+|++ .++ +|.++|.++++++++||.++
T Consensus 272 aILhLGNi~F~~~~~~~~~~~~~~v~~~~~l~~~a~LLgv~~~~L~~~L~~r~~--~~~-~g~~~e~i~~~l~~~qA~~~ 348 (697)
T 1lkx_A 272 AILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAASCLKTDQQSLSIALCYRSI--STG-VGKRCSVISVPMDCNQAAYS 348 (697)
T ss_dssp HHHHHTTCCEEEETTC----CEEEESSHHHHHHHHHHHTSCHHHHHHHHHBCC-------------CCCCBCCHHHHHHH
T ss_pred HHHhcccceEeecccccCCCCcceeCCHHHHHHHHHhhCCCHHHHHHHHhccEE--eec-cCCCCCeEEecCCHHHHHHH
Confidence 999999999987321 13346899999999999999999999999999999999 772 12349999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHH
Q psy18109 160 RNSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREE 239 (602)
Q Consensus 160 RDaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~e 239 (602)
||||||+||+|||+|||.+||++|..+.. ...+||||||||||+|+ .|||||||||||||||||+|++++|+.|
T Consensus 349 rdalaK~lY~rLF~wlV~~IN~~l~~~~~-~~~~IGvLDI~GFE~f~-----~NsFEQlcINy~NEkLQq~F~~~~f~~E 422 (697)
T 1lkx_A 349 RDALAKALYERLFNWLVSKINTIINCTTE-KGPVIGILDIYGFEVFQ-----NNSFEQLNINFCNEKLQQLFIELTLKSE 422 (697)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCSC-CCCEEEEEECCCCCCCS-----SBCHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCC-CceeEEeeccccccccC-----cCCHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999986543 35799999999999999 9999999999999999999999999999
Q ss_pred HHHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccCCC
Q psy18109 240 QEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLSTP 314 (602)
Q Consensus 240 qeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~~~ 314 (602)
|+||++|||+|++|+|+||++||||||++|.|||+|||||| ||.+|++|+++.+++|++|.+++.
T Consensus 423 qeeY~~EgI~w~~i~f~dN~~~idLie~kp~GilslLDEec~~p~~tD~~f~~kl~~~~~~~~~f~~~~~---------- 492 (697)
T 1lkx_A 423 QEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHLQSYVV---------- 492 (697)
T ss_dssp HHHHHHTTCCCCCCCCSCCCHHHHHTTSSSSSHHHHHHHHHHSTTCCHHHHHHHHHHHSSSSTTEECTTT----------
T ss_pred HHHHHhcCCcccccCCCCCHHHHHHHhcccCChhhhhHHhhCCCCCChHHHHHHHHHHhcCCCccccCCC----------
Confidence 99999999999999999999999999999999999999999 999999999999999999977532
Q ss_pred CCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC-----CCCCCccchhhcc
Q psy18109 315 SSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET-----RVPEAQPTRFRIS 389 (602)
Q Consensus 315 ~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~-----~r~~Tv~s~fk~s 389 (602)
+.+++.....|+|+||||+|+|++.||+|||+|.|+++++++|++|++++|+.||+++. +|++||+++||.|
T Consensus 493 ---~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~l~~lf~~~~~~~~~~r~~Tv~~~fk~s 569 (697)
T 1lkx_A 493 ---SKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLFPPTRPEDSKKRPETAGSQFRNA 569 (697)
T ss_dssp ---SCCTTSCTTEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHHTCCSHHHHHHCC-----------CCHHHHHHHH
T ss_pred ---CCCCccccCceeeeeeeeEEEEccCChhhhhcccccHHHHHHHhccchHHHHHhccccccccccCCCCcHHHHHHHH
Confidence 12344457889999999999999999999999999999999999999999999998753 6789999999999
Q ss_pred ccC------CCCceeEEEecccCCCCCCCCcc
Q psy18109 390 ILG------SSTLKYSILKVCPNIVDRPSMDE 415 (602)
Q Consensus 390 l~~------~t~phy~IRCIKPN~~k~p~~fd 415 (602)
|.. +|+||| |||||||+.|.|+.||
T Consensus 570 L~~Lm~~L~~t~phf-VRCIkPN~~k~p~~fd 600 (697)
T 1lkx_A 570 MNALITTLLACSPHY-VRCIKSNDNKQAGVID 600 (697)
T ss_dssp HHHHHHHHTTSEEEE-EEEECCCTTCCTTCCC
T ss_pred HHHHHHHHHccCCcc-eEeecCCCcCCCCCcC
Confidence 987 999999 9999999999999999
No 7
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=100.00 E-value=6.5e-104 Score=930.83 Aligned_cols=434 Identities=26% Similarity=0.390 Sum_probs=394.0
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|++++++++|+| .++++|+||++|+. .+++ ||+++|+.|+.||++|||+++|+..||+|||
T Consensus 261 qll~g~~~~~~~~l~L-~~~~~y~yl~~~~~-------------~~~~-dD~~~f~~~~~A~~~lg~~~~e~~~i~~ila 325 (995)
T 2ycu_A 261 QLLGGAGEQLKADLLL-EPCSHYRFLTNGPS-------------SSPG-QERELFQETLESLRVLGFSHEEIISMLRMVS 325 (995)
T ss_dssp HHHHHCCHHHHHHTTC-CCGGGCTTSTTCSC-------------SSTT-THHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHcCC-CChHHcccccCCcc-------------ccCC-cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 6899999999999999 89999999999986 7788 9999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|.+.. ..+.+.+.+.+.++.+|.||||++++|.++||+|++ .+ ++|.++++++++||.++|
T Consensus 326 aILhlGni~F~~~~---~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~--~~-----~~e~v~~~~~~~qa~~~r 395 (995)
T 2ycu_A 326 AVLQFGNIALKRER---NTDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRI--KV-----GRDYVQKAQTKEQADFAL 395 (995)
T ss_dssp HHHHGGGCCCEECS---SSCCEECSCCHHHHHHHHHTTCCHHHHHHHHHSCEE--ES-----SSSEEECCCCHHHHHHHH
T ss_pred HHHhhccceEeecC---CCcccccCChHHHHHHHHHHCCCHHHHHHHhcCcEE--Ec-----CCceecCCCCHHHHHHHH
Confidence 99999999999853 235688899999999999999999999999999999 88 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||+|||+|||.+||.+|..+......+||||||||||+|+ .|||||||||||||||||+|++++|+.||
T Consensus 396 dalak~lY~~LF~wlV~~iN~~l~~~~~~~~~~IgvLDI~GFE~f~-----~NsfEQlcINy~NEkLQq~F~~~~f~~Eq 470 (995)
T 2ycu_A 396 EALAKATYERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFEIFQ-----LNSFEQLCINYTNEKLQQLFNHTMFVLEQ 470 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCSCCCSEEEEEEECCCBCCCS-----SBCHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceEEEeccccccccc-----cchHHHHHHHhhHHHHHHHHHHhhhHHHH
Confidence 9999999999999999999999986544356899999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccc-cChHHHHHHHhc--CcccccccccccC-----CHHHHHHHHhhccCCCCCCcCCCCCCCCCccC
Q psy18109 241 EEYRRENIEWCYVEF-FNNSAICDIIET--NSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPERGRGGVRTPGVLS 312 (602)
Q Consensus 241 eeY~~EGI~w~~i~~-~dN~~~~dLie~--~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~~~~~~~~~p~~~~ 312 (602)
+||.+|||+|++|+| .||++||||||+ +|.|||+|||||| ||.+|++||+..+++|++|.+++.
T Consensus 471 eeY~~EgI~w~~i~f~~dn~~~idlie~~~~p~Gil~lLdee~~~p~~tD~~f~~kl~~~~~~~~~f~~~~~-------- 542 (995)
T 2ycu_A 471 EEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVAQEQGGHPKFQRPRH-------- 542 (995)
T ss_dssp HHHHHTTCCCCCCCCSCCCHHHHHHHHCCSSSCCHHHHHHHSSSSTTCCHHHHHHHHHHHHTTSTTEECCCT--------
T ss_pred HHHhccCCCccccccccChHHHHHHHhccCCCCchhhhhHHHhcCCCCchHHHHHHHHHhcCCCCCcccCCc--------
Confidence 999999999999999 599999999998 4899999999999 999999999999999999987632
Q ss_pred CCCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC----------------
Q psy18109 313 TPSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET---------------- 376 (602)
Q Consensus 313 ~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~---------------- 376 (602)
......|+|+||||+|+|++.||+|||+|+|+++++.+|++|+++||+.||+...
T Consensus 543 ---------~~~~~~F~i~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~~~~~~~ 613 (995)
T 2ycu_A 543 ---------LRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGIVGLEQVSSLGDGPP 613 (995)
T ss_dssp ---------TTCCSSEEEEETTEEEEECCTTHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSSCCSSCSCCC---------
T ss_pred ---------cCCCCeeEEECCCCCccccccchhhhccccccHHHHHHHHhCcHHHHHHHhhccccccccccccccccccc
Confidence 0135789999999999999999999999999999999999999999999997421
Q ss_pred ------CCCCCccchhhccccC------CCCceeEEEecccCCCCCCCCcc-----------------------------
Q psy18109 377 ------RVPEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDE----------------------------- 415 (602)
Q Consensus 377 ------~r~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd----------------------------- 415 (602)
.+++||+++||.||.. +|+||| |||||||+.|.|+.||
T Consensus 614 g~~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~phf-VRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~r~~ 692 (995)
T 2ycu_A 614 GGRPRRGMFRTVGQLYKESLSRLMATLSNTNPSF-VRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRIL 692 (995)
T ss_dssp ----CCCSSCCHHHHHHHHHHHHHHHHHTSEEEE-EEEECCCSSCCTTCCCTTTHHHHHHHHTHHHHHHHHHHSCCEEEE
T ss_pred ccCcCCCCCCchHHHHHHHHHHHHHHHHhcCcce-eeeecCCccccccccCHHHHHHHhcccchHHHHHHHHhcCCcccc
Confidence 1357999999999987 999999 9999999999999999
Q ss_pred -------ccccccC----C-------c----------------cc--------chhhHHHHHHHHHHHH-----HHHHHH
Q psy18109 416 -------IKLCCRG----S-------V----------------DV--------SVFELEEFRRDRLVDL-----AVLIQK 448 (602)
Q Consensus 416 -------yk~L~~g----g-------v----------------~~--------tlf~LE~~R~~~l~~~-----A~~IQk 448 (602)
|++|++. | + ++ +++.||++|++++... |..+++
T Consensus 693 ~~~F~~RY~~L~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~~G~tkVF~r~~~~~~LE~~R~~~l~~~eYe~~a~~Ll~ 772 (995)
T 2ycu_A 693 FQEFRQRYEILTPNAIPKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEERASEQTKSDYLKRANELVQ 772 (995)
T ss_dssp HHHHHHHHGGGSTTTSCSCCCCSCCSCCCSCCCSSEEESSEEEESSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcccccccCCCHHHHHHHHHHHcCCChhheeecceEEEEecchhhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 8888762 1 1 11 3668999999988764 556777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH
Q psy18109 449 VWRGYHQRKDFLKRKRSQIIIASAWRSWRFVPIL 482 (602)
Q Consensus 449 ~~Rg~~aRk~y~k~r~aai~IQ~~~R~~~~r~r~ 482 (602)
++|+..++..+++++.++..||++||+++.+++.
T Consensus 773 WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~ 806 (995)
T 2ycu_A 773 WINDKQASLESRDFGDSIESVQSFMNAHKEYKKT 806 (995)
T ss_dssp HTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 8888888888899999999999999998765544
No 8
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=100.00 E-value=7.4e-103 Score=921.03 Aligned_cols=426 Identities=27% Similarity=0.457 Sum_probs=388.3
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|+++++++.|+| .++++|+||++|+|. .++++||+++|+.|+.||++|||+++|+.+||+|||
T Consensus 283 qll~g~~~~~~~~l~L-~~~~~y~yl~~~~~~------------~~~~~dD~~~f~~~~~A~~~lg~~~~e~~~i~~ila 349 (1010)
T 1g8x_A 283 QLLAGATAEEKKALHL-AGPESFNYLNQSGCV------------DIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIA 349 (1010)
T ss_dssp HHHHHCCHHHHHHHTC-CCGGGCGGGSSSSCC------------CCBTCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHhCC-CChHhcchhcCCCcc------------ccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 6899999999999999 899999999999986 889999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|.+.. .+.+.+.+.+.++.+|.||||++++|.++||+|++ .+ ++|.++++++++||.++|
T Consensus 350 aILhLGni~F~~~~----~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~--~~-----~~e~v~~~~~~~qa~~~r 418 (1010)
T 1g8x_A 350 GILHLGNIKFEKGA----GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRI--LA-----GRDLVAQHLNVEKSSSSR 418 (1010)
T ss_dssp HHHHHTTCCCBCCT----TSSCBCSCCHHHHHHHHHHTSCHHHHHHHHHSCEE--ES-----SSSEEECCCCSHHHHHHH
T ss_pred HHHHhccceEEecC----CCccccCChHHHHHHHHHHCCCHHHHHHHHhCcEE--Ee-----CCeeEEeCCCHHHHHHHH
Confidence 99999999998743 26688999999999999999999999999999999 88 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||+|||+|||.+||.+|..+. ...+||||||||||+|+ .|||||||||||||||||+|++++|+.||
T Consensus 419 dalak~lY~~LF~wlV~~IN~~l~~~~--~~~~IgvLDI~GFE~f~-----~NsfEQlcINy~NEkLQq~F~~~~f~~Eq 491 (1010)
T 1g8x_A 419 DALVKALYGRLFLWLVKKINNVLCSER--KAYFIGVLDISGFEIFK-----VNSFEQLCINYTNEKLQQFFNHHMFKVEQ 491 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSS--CSEEEEEEECCCCCCCS-----SBCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC--cCceeeeccCcccccCC-----cCcHHHHHHHhhhHHHHHHHHHHhhHHHH
Confidence 999999999999999999999998654 56899999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCcccccccc-ChHHHHHHHhcC-cccccccccccC-----CHHHHHHHHhhccC-CCCCCcCCCCCCCCCccC
Q psy18109 241 EEYRRENIEWCYVEFF-NNSAICDIIETN-SHGILSLLDEES-----SDEAFLLKLGSYSS-SLTPERGRGGVRTPGVLS 312 (602)
Q Consensus 241 eeY~~EGI~w~~i~~~-dN~~~~dLie~~-~~GIl~lLDeec-----tD~~fl~kl~~~~~-~~~~~~~~~~~~~p~~~~ 312 (602)
+||.+|||+|++|+|. ||++||||||++ |.|||+|||||| ||.+|++|++++++ +|++|.+|+.
T Consensus 492 eeY~~EgI~w~~i~f~~dn~~~idlie~~~~~Gil~lLdee~~~p~~td~~f~~kl~~~~~~~~~~f~~~~~-------- 563 (1010)
T 1g8x_A 492 EEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRF-------- 563 (1010)
T ss_dssp HHHHHTTCCCCCCCCCCCSHHHHHHHHCTTTTCHHHHHHHHTTSSSCCHHHHHHHHHHHHTTTCTTEECCTT--------
T ss_pred HHhhccCCCccccccccChHHHHHHHhcCCCCeeehhhhHHhCCCCCChHHHHHHHHHHhcCCCCCcccCCC--------
Confidence 9999999999999995 999999999984 899999999999 99999999999999 9999977632
Q ss_pred CCCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC--------CCCCCccc
Q psy18109 313 TPSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET--------RVPEAQPT 384 (602)
Q Consensus 313 ~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~--------~r~~Tv~s 384 (602)
....|+|+||||+|+|++.||+|||+|+|+++++.+|++|+++||+.||+... .+++||++
T Consensus 564 -----------~~~~F~i~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~~~~lf~~~~~~~~~~k~~~~~tv~~ 632 (1010)
T 1g8x_A 564 -----------SKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAA 632 (1010)
T ss_dssp -----------CSSEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHCHHHHSCCCCSSSCCCHHH
T ss_pred -----------CCCCEEEeeeceEEEEeecCccccccccccHHHHHHHHhCcHHHHHHHhcccccccCCCCCCCCCchHH
Confidence 23589999999999999999999999999999999999999999999997631 23589999
Q ss_pred hhhccccC------CCCceeEEEecccCCCCCCCCcc------------------------------------ccccccC
Q psy18109 385 RFRISILG------SSTLKYSILKVCPNIVDRPSMDE------------------------------------IKLCCRG 422 (602)
Q Consensus 385 ~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd------------------------------------yk~L~~g 422 (602)
+||.||.. +|+||| |||||||+.|.|+.|| |++|++.
T Consensus 633 ~fk~sL~~Lm~~L~~t~phf-VRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~r~~~~~F~~RY~~L~~~ 711 (1010)
T 1g8x_A 633 QYKEQLASLMATLETTNPHF-VRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPN 711 (1010)
T ss_dssp HHHHHHHHHHHHHTTSEEEE-EEEECSCSSCCTTCCCHHHHHHHHHHSSHHHHHHHHTTSCCEEEEHHHHHHHHGGGSTT
T ss_pred HHHHHHHHHHHHHHhcCCee-eeeecCCcccccCCcChhhcchhcccCccHHHHHHHHhCCcccccHHHHHHHHHHhCCC
Confidence 99999987 999999 9999999999999999 8888752
Q ss_pred ----------------------------Cc------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Q psy18109 423 ----------------------------SV------DVSVFELEEFRRDRLVDLAVLIQKVWRGYHQRKDFLKRKR---- 464 (602)
Q Consensus 423 ----------------------------gv------~~tlf~LE~~R~~~l~~~A~~IQk~~Rg~~aRk~y~k~r~---- 464 (602)
|. ..+++.||++|++++..+++.||..+|+...+++.+...+
T Consensus 712 ~~~~~~d~~~~~~~ll~~~~~~~~~~~~G~tkVF~r~~~l~~LE~~R~~~l~~~~~~iQY~~~a~~L~~WIr~kqa~l~~ 791 (1010)
T 1g8x_A 712 VPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRLGSEQTKSDYLKRANELVQWINDKQASLES 791 (1010)
T ss_dssp CCTTCSCHHHHHHHHHHHTTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcCCCCHHHHHHHHHHHcCCCccceeehhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 1237789999999999999999998888776665554332
Q ss_pred -----HHHHHHHHHHhhh
Q psy18109 465 -----SQIIIASAWRSWR 477 (602)
Q Consensus 465 -----aai~IQ~~~R~~~ 477 (602)
++..||+.++.++
T Consensus 792 r~~~~sl~~IQ~ll~~f~ 809 (1010)
T 1g8x_A 792 RDFGDSIESVQSFMNAHK 809 (1010)
T ss_dssp CCCCSSHHHHHHHHHHHH
T ss_pred hhccccHHHHHHHHHHHH
Confidence 3566888887754
No 9
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=100.00 E-value=6.3e-103 Score=896.54 Aligned_cols=369 Identities=29% Similarity=0.466 Sum_probs=334.1
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVVA 80 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ilA 80 (602)
|||+|+++++++.|+|..++++|+||+++.. .++++||+++|+.|++||++|||+++|+..||+|||
T Consensus 288 qLlaG~~~~~~~~l~L~~~~~~y~yl~~g~~-------------~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~i~~ila 354 (783)
T 4db1_A 288 QILSNKKPELLDMLLITNNPYDYAFISQGET-------------TVASIDDAEELMATDNAFDVLGFTSEEKNSMYKLTG 354 (783)
T ss_dssp HHHTCSSHHHHHHTTCCSCGGGCGGGCSSCC-------------CCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHhccCCCHHHCccccCCCc-------------ccCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7999999999999999778999999999876 789999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHHH
Q psy18109 81 SVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVTR 160 (602)
Q Consensus 81 aILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~R 160 (602)
||||||||+|.+..+ .+.+.+.+.+.++.+|+||||++++|.++||+|++ .+ ++|.++++++++||.++|
T Consensus 355 aILhLGNi~F~~~~~---~~~~~~~~~~~l~~~a~LLgv~~~~L~~aL~~~~i--~~-----~~e~v~~~~~~~qA~~~r 424 (783)
T 4db1_A 355 AIMHFGNMKFKLKQR---EEQAEPDGTEEADKSAYLMGLNSADLLKGLCHPRV--KV-----GNEYVTKGQNVQQVIYAT 424 (783)
T ss_dssp HHHHHTTCCEEECTT---SSCEEESCCHHHHHHHHHTTCCHHHHHHHHHSCC-------------CCCCCCCHHHHHHHH
T ss_pred HHHhhccceeeccCC---CcccccCChHHHHHHHHHhCCCHHHHHHhhcceEE--Ee-----CCeeEeeCCCHHHHHHHH
Confidence 999999999988532 35678899999999999999999999999999999 88 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHHH
Q psy18109 161 NSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREEQ 240 (602)
Q Consensus 161 DaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~eq 240 (602)
|||||+||+|||+|||++||++|..+. ....+||||||||||+|+ .|||||||||||||||||+|++++|+.||
T Consensus 425 dalAK~lY~rLF~wlV~~IN~~l~~~~-~~~~~IGvLDI~GFE~f~-----~NsFEQlCINyaNEkLQq~Fn~~~F~~Eq 498 (783)
T 4db1_A 425 GALAKAVYERMFNWMVTRINATLETKQ-PRQYFIGVLDIAGFEIFD-----FNSFEQLCINFTNEKLQQFFNHHMFVLEQ 498 (783)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSC-CCSEEEEEEECCCCCCCS-----SCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCceEEEeccccccccc-----cCCHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999998653 345799999999999999 99999999999999999999999999999
Q ss_pred HHHHhccCccccccc-cChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhcc-CCCCCCcCCCCCCCCCccCC
Q psy18109 241 EEYRRENIEWCYVEF-FNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYS-SSLTPERGRGGVRTPGVLST 313 (602)
Q Consensus 241 eeY~~EGI~w~~i~~-~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~-~~~~~~~~~~~~~~p~~~~~ 313 (602)
+||.+|||+|+.|+| .||++|+||||+ |.|||+|||||| ||.+|++||++.+ ++|++|.+++.
T Consensus 499 eeY~~EgI~w~~i~f~~Dn~~~idLiek-p~Gil~lLDEec~~p~~tD~tf~~kl~~~~~~~~~~f~~~~~--------- 568 (783)
T 4db1_A 499 EEYKKEGIEWTFIDFGMDLQACIDLIEK-PMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRN--------- 568 (783)
T ss_dssp HHHHHHTCCCCCCCGGGGGHHHHHHHHS-TTSHHHHHCC-TTCTTCCHHHHHHHHHHHHTTTCTTEECCCC---------
T ss_pred HHhhhcCCCcccccccCChHHHHHHHhC-CCchHhhhhHHhcCCCCCHHHHHHHHHHHhcCCCCCccCCCC---------
Confidence 999999999999999 599999999998 789999999999 9999999999866 89999987632
Q ss_pred CCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC-------------CC--
Q psy18109 314 PSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET-------------RV-- 378 (602)
Q Consensus 314 ~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~-------------~r-- 378 (602)
.+......|+|+||||+|+|++.||+|||+|+|+++++++|++|++++|+.||+... ++
T Consensus 569 ------~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~~~~~~~~ 642 (783)
T 4db1_A 569 ------IKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAGADAPIEKGKGKAKKGS 642 (783)
T ss_dssp ----------C-CCEEEEETTEEEEECCTTHHHHHHCCCCHHHHHHHHTCSSHHHHHHHHSCC-----------------
T ss_pred ------CCCCCCCCeEEeCcCCceEEeCcChhhhccccccHHHHHHHHHCccHHHHHHhhccccccccccCccCCCCcCC
Confidence 111245789999999999999999999999999999999999999999999997521 12
Q ss_pred -CCCccchhhccccC------CCCceeEEEecccCCCCCCCCcc
Q psy18109 379 -PEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDE 415 (602)
Q Consensus 379 -~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd 415 (602)
.+||+++||.||.. +|+||| |||||||+.|.|+.||
T Consensus 643 ~~~Tv~~~fk~sL~~Lm~~L~~t~phf-VRCIkPN~~k~p~~fd 685 (783)
T 4db1_A 643 SFQTVSALHRENLNKLMTNLRSTHPHF-VRCIIPNETKSPGVMD 685 (783)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHTSEEEE-EEEECCCSSCCTTCCC
T ss_pred CCccHHHHHHHHHHHHHHHHHccCCEE-EEeeCCCcccCCCccc
Confidence 27999999999987 999999 9999999999999999
No 10
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=100.00 E-value=1e-102 Score=892.26 Aligned_cols=363 Identities=29% Similarity=0.543 Sum_probs=339.3
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCcc-ccCCCcccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhHHHHHHH
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSF-LKSSVVHNHISSSPMFSPATSPHLDDKACFLRTRKACEALGFTPDEILDIFKVV 79 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~Y-L~~~~~~~~~~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~il 79 (602)
|||+|++++++++|+| .++++|+| |+++.. .++++||+++|++|++||++|||+++|+..||+||
T Consensus 283 qLlaG~~~~~~~~l~L-~~~~~y~yll~~g~~-------------~~~~~dD~~~f~~~~~Am~~lGf~~~e~~~i~~il 348 (770)
T 1w9i_A 283 QLLAGATAEEKKALHL-AGPESFNYLNQSGCV-------------DIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKII 348 (770)
T ss_dssp HHHHHCCHHHHHHHTC-CCGGGCTTTSSSSCC-------------CCTTCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHhcCCCHHHHHHhCC-CChhhccccccCCcc-------------ccCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 6899999999999999 89999999 888764 78999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCCceEEeeCCHHHHHHH
Q psy18109 80 ASVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGSTLIVTELSAGEATVT 159 (602)
Q Consensus 80 AaILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~e~i~~~l~~~qA~~~ 159 (602)
|||||||||+|.. +..+.+.+.+.+.++.+|+||||++++|.++||+|++ .+ ++|.++++++++||.++
T Consensus 349 aaILhLGNi~F~~----~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~aL~~~~~--~~-----~~e~v~~~~~~~qA~~~ 417 (770)
T 1w9i_A 349 AGILHLGNIKFEK----GAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRI--LA-----GRDLVAQHLNVEKSSSS 417 (770)
T ss_dssp HHHHHHHTCCCEE----CSSSSEECSCCHHHHHHHHHHTCCHHHHHHHHHSCEE--EE-----TTEEEECCCCHHHHHHH
T ss_pred HHHHhhcCceEec----CCCCccccCChHHHHHHHHHhCCCHHHHHHHhhCcEE--Ee-----CCeeEEeCCCHHHHHHH
Confidence 9999999999994 2346688999999999999999999999999999999 88 89999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhhhHHHHHHHHHhHHHH
Q psy18109 160 RNSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCNEKLHQLFTDVMLREE 239 (602)
Q Consensus 160 RDaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~NEkLQq~f~~~~f~~e 239 (602)
||||||+||+|||+|||++||++|..+.. ..+||||||||||+|+ .|||||||||||||||||+|++++|+.|
T Consensus 418 rdalaK~lY~rLF~wlV~~IN~~l~~~~~--~~~IGvLDI~GFE~F~-----~NsFEQlCINyaNEkLQq~Fn~~~f~~E 490 (770)
T 1w9i_A 418 RDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGVLDIYGFEIFK-----VNSFEQLCINYTNEKLQQFFNHHMFKLE 490 (770)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSCC--SEEEEEEECCCCCCCS-----SCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCeeeeccCccccccc-----cCCHHHHHHHhhHHHHHHHHHhhhhHHH
Confidence 99999999999999999999999986543 6899999999999999 9999999999999999999999999999
Q ss_pred HHHHHhccCcccccccc-ChHHHHHHHhcC-cccccccccccC-----CHHHHHHHH-hhccCCCCCCcCCCCCCCCCcc
Q psy18109 240 QEEYRRENIEWCYVEFF-NNSAICDIIETN-SHGILSLLDEES-----SDEAFLLKL-GSYSSSLTPERGRGGVRTPGVL 311 (602)
Q Consensus 240 qeeY~~EGI~w~~i~~~-dN~~~~dLie~~-~~GIl~lLDeec-----tD~~fl~kl-~~~~~~~~~~~~~~~~~~p~~~ 311 (602)
|+||++|||+|+.|+|. ||++||||||++ |.|||+|||||| ||.+|++|| .+++++|++|.+++.
T Consensus 491 qeeY~~EgI~w~~i~f~~dn~~~idLiek~~p~GilslLDEec~~p~~tD~~f~~kL~~~~~~~~~~f~~p~~------- 563 (770)
T 1w9i_A 491 QEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRF------- 563 (770)
T ss_dssp HHHHHTTTCCCCCCCGGGGGHHHHHHHHCTTTTCHHHHHHHHHSSSSCCHHHHHHHHHHHHTTTSTTEECCSS-------
T ss_pred HHHhhccCCCceeeccccCcHHHHHHHhCCCCCchhhhhhhhhCCCCCChHHHHHHHHHHhcCCCCCccCCCC-------
Confidence 99999999999999995 999999999985 899999999999 999999996 556789999977632
Q ss_pred CCCCCCCCCCCCCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCC----C----CCCCCcc
Q psy18109 312 STPSSAGGDNSLPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEE----T----RVPEAQP 383 (602)
Q Consensus 312 ~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~----~----~r~~Tv~ 383 (602)
....|+|+||||+|+|++.||+|||+|+|+++++.+|++|++++|+.||+.. . .+++||+
T Consensus 564 ------------~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~Lf~~~~~~~~~~k~~~~~Tv~ 631 (770)
T 1w9i_A 564 ------------SKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVA 631 (770)
T ss_dssp ------------CSSEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHHTCSSTTHHHHHHCHHHHCCCEETTEECCHH
T ss_pred ------------CCCceEeeccCccccccccChhhhccCcccHHHHHHHHhchHHHHHHHhhccCCCCCCCCCCCCcchh
Confidence 2378999999999999999999999999999999999999999999999762 1 1258999
Q ss_pred chhhccccC------CCCceeEEEecccCCCCCCCCcc
Q psy18109 384 TRFRISILG------SSTLKYSILKVCPNIVDRPSMDE 415 (602)
Q Consensus 384 s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd 415 (602)
++||.||.. +|+||| |||||||+.|.|+.||
T Consensus 632 ~~fk~sL~~Lm~~L~~t~phf-VRCIkPN~~k~p~~fd 668 (770)
T 1w9i_A 632 AQYKEQLASLMATLETTNPHF-VRCIIPNNKQLPAKLE 668 (770)
T ss_dssp HHHHHHHHHHHHHHHTSEEEE-EEEECSCSSCCSSCCC
T ss_pred HHHHHHHHHHHHHHHhcCcee-eeeecCCcccccCccC
Confidence 999999988 999999 9999999999999999
No 11
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=100.00 E-value=1e-102 Score=897.98 Aligned_cols=392 Identities=30% Similarity=0.459 Sum_probs=334.1
Q ss_pred CccCCCCHhhHhhcCCCCCCCCCccccCCCcccccC-----C-CCC-C-------CCCCCCCcchHHHHHHHHHHHHHcC
Q psy18109 1 MFVSACPLNDLKLLKLQRNLENYSFLKSSVVHNHIS-----S-SPM-F-------SPATSPHLDDKACFLRTRKACEALG 66 (602)
Q Consensus 1 qLLaGas~~~~~~L~L~~~~~~y~YL~~~~~~~~~~-----~-~~~-~-------~~~~~~~~dD~~~f~~~~~Am~~lG 66 (602)
|||+|++++++++|+| .++++|+||+++.+..... . +|. . ++..++++||+++|++|++||++||
T Consensus 246 qLlaG~~~~~~~~l~L-~~~~~y~yL~~g~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lG 324 (784)
T 2v26_A 246 RLCAGASEDIRERLHL-SSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIG 324 (784)
T ss_dssp HHHHHSCHHHHHHTTC-CCGGGCHHHHTSCCCCBCCHHHHTTSCGGGCCHHHHHHCCBCCSSCCHHHHHHHHHHHHHHTT
T ss_pred HHHcCCCHHHHHHcCC-CChhhCccccCCCccccccccccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHcC
Confidence 7899999999999999 7999999999986410000 0 000 0 1124568999999999999999999
Q ss_pred CCchhhHHHHHHHHHHHhhcceeeEeccCCCCCCceeec--ChHHHHHHhhhcCCCHHhHhhhhceeeecccCCCCCCCC
Q psy18109 67 FTPDEILDIFKVVASVLKLGNVVFIPSNNIDGTEGCTVS--NDYELYEVCDLLSMDCTILQGAITSRSLFIDDPHEDCGS 144 (602)
Q Consensus 67 fs~~e~~~I~~ilAaILhLGNi~F~~~~~~~~~~~~~i~--~~~~l~~~a~LLgv~~~~L~~aLt~r~i~~~~~~~~~~~ 144 (602)
|+++|+.+||+|||||||||||+|.+.. +..++|.+. +.+.++.+|+||||++++|.++||+|++ .+..++.++
T Consensus 325 ~~~~e~~~i~~ilaaILhLGNi~F~~~~--~~~~~~~v~~~~~~~l~~~a~LLgv~~~~L~~aL~~r~~--~t~~g~~~g 400 (784)
T 2v26_A 325 LDDEEKLDLFRVVAGVLHLGNIDFEEAG--STSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVM--LTTAGGAKG 400 (784)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCCEEECT--TTTSSEEECGGGHHHHHHHHHHHTCCHHHHHHHHHEEEC-----------
T ss_pred CCHHHHHHHHHHHHHHHhcccceeeecc--CCCCccccccCCHHHHHHHHHHhCCCHHHHHHHHhhcEE--eccccCCCC
Confidence 9999999999999999999999998842 223457775 4678999999999999999999999998 643333478
Q ss_pred ceEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCceeeeeeeccccccccCCCCCCCchhhhhhhhhh
Q psy18109 145 TLIVTELSAGEATVTRNSLCKALYSRLFTYIVNRTNKAVKVKPSGKRKVLGILDIYGFEAYDGKCGSSNGFEQFIINFCN 224 (602)
Q Consensus 145 e~i~~~l~~~qA~~~RDaLaK~LY~rLF~wiV~~IN~~l~~~~~~~~~~IgILDI~GFE~f~~~~~~~NsFEQlcINy~N 224 (602)
|.++++++++||.++||||||+||+|||+|||++||++|.... ...+||||||||||+|+ .||||||||||||
T Consensus 401 e~i~~~l~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~~--~~~~IGvLDI~GFE~f~-----~NsFEQlcINyaN 473 (784)
T 2v26_A 401 TVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFET--SSYFIGVLDIAGFEYFE-----HNSFEQFCINYCN 473 (784)
T ss_dssp --CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSC--CSEEEEEEECCCCCCCS-----SCCHHHHHHHHHH
T ss_pred CeEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc--ccceeeecccCCcccCC-----cCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997543 45799999999999999 9999999999999
Q ss_pred hHHHHHHHHHhHHHHHHHHHhccCccccccccChHHHHHHHhcCcccccccccccC-----CHHHHHHHHhhccCCCCCC
Q psy18109 225 EKLHQLFTDVMLREEQEEYRRENIEWCYVEFFNNSAICDIIETNSHGILSLLDEES-----SDEAFLLKLGSYSSSLTPE 299 (602)
Q Consensus 225 EkLQq~f~~~~f~~eqeeY~~EGI~w~~i~~~dN~~~~dLie~~~~GIl~lLDeec-----tD~~fl~kl~~~~~~~~~~ 299 (602)
|||||+|++++|+.||+||++|||+|++|+|+||++||||||++|.|||+|||||| ||.+|++||++.+++|++|
T Consensus 474 EkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~DN~~~idLie~kp~GIlslLDEe~~~p~~tD~~f~~kl~~~~~~~~~~ 553 (784)
T 2v26_A 474 EKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRL 553 (784)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSSCCHHHHHHHHHHHTTTCTTE
T ss_pred HHHHHHHHHhhhhhHHHHHHhcCCCcccccccChHHHHHHHhhccccHHHHHHHHhcCCCCChHHHHHHHHHHhCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cCCCCCCCCCccCCCCCCCCCCC-CCCCccEEeeccceeeeeechhhhhhccchHHHHHHHHHcCccccccccccCCC--
Q psy18109 300 RGRGGVRTPGVLSTPSSAGGDNS-LPPFCFRLRHYAGTVLYNVRGFVEKNGELLHRDVSLAMYTSQHPLLKHLFPEET-- 376 (602)
Q Consensus 300 ~~~~~~~~p~~~~~~~~~~~~~~-~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~d~~~ll~~S~~~~i~~lf~~~~-- 376 (602)
..|+.. +....+. .....|+|+||||+|+|++.||+|||+|.|+++++.+|++|++++|+.||+...
T Consensus 554 ~~p~~~----------~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~l~~Lf~~~~~~ 623 (784)
T 2v26_A 554 SIPRKS----------KLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESSTNN 623 (784)
T ss_dssp ECGGGC----------SSGGGTTSCTTSEEEEEETTEEEEEECTTHHHHTBCCCCHHHHHHHHTCSCHHHHHHC------
T ss_pred ccCCCc----------cccccccccCCCceEeeecCccEeeeccCHHHhccchhhHHHHHHHHhchhhHHHHHccccccc
Confidence 776330 0001111 134689999999999999999999999999999999999999999999998642
Q ss_pred ----C------CCCCccchhhccccC------CCCceeEEEecccCCCCCCCCcc
Q psy18109 377 ----R------VPEAQPTRFRISILG------SSTLKYSILKVCPNIVDRPSMDE 415 (602)
Q Consensus 377 ----~------r~~Tv~s~fk~sl~~------~t~phy~IRCIKPN~~k~p~~fd 415 (602)
+ +.+||+++||.||.. +|+||| |||||||+.|.|+.||
T Consensus 624 ~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phf-VRCIkPN~~k~p~~fd 677 (784)
T 2v26_A 624 NKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASF-IRCIKPNLKMTSHHFE 677 (784)
T ss_dssp ----------CCCCBHHHHHHHHHHHHHHHHHTSEEEE-EEEECCCSSCCSSCCC
T ss_pred ccCcccCCCCCccccHHHHHHHHHHHHHHHHHccCCee-EEEecCCcccccCccc
Confidence 1 237999999999987 999999 9999999999999999
No 12
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=99.04 E-value=3.5e-10 Score=88.41 Aligned_cols=50 Identities=26% Similarity=0.315 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhh
Q psy18109 438 RLVDLAVLIQKVWRGYHQRKDFLKRKRSQIIIASAWRSWRFVPILFVLST 487 (602)
Q Consensus 438 ~l~~~A~~IQk~~Rg~~aRk~y~k~r~aai~IQ~~~R~~~~r~r~l~lt~ 487 (602)
++..+|+.||+.||||++|++|.+++.+++.||++||||.+|+++..+..
T Consensus 3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~r~ 52 (58)
T 2ix7_C 3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRR 52 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999887765
No 13
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.85 E-value=2.5e-09 Score=80.22 Aligned_cols=44 Identities=14% Similarity=0.272 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhhhhHH
Q psy18109 440 VDLAVLIQKVWRGYHQRKDFLKRKR--SQIIIASAWRSWRFVPILF 483 (602)
Q Consensus 440 ~~~A~~IQk~~Rg~~aRk~y~k~r~--aai~IQ~~~R~~~~r~r~l 483 (602)
..+++.||+.||||++|+.|..++. |++.||++||||..|+.++
T Consensus 3 r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y~ 48 (48)
T 1n2d_C 3 SQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANVF 48 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhC
Confidence 4688999999999999999999987 8999999999999998763
No 14
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=98.26 E-value=9.1e-07 Score=70.33 Aligned_cols=47 Identities=28% Similarity=0.444 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhhhhh
Q psy18109 435 RRDRLVDLAVLIQKVWRGYHQRKDFLKR---KRSQIIIASAWRSWRFVPI 481 (602)
Q Consensus 435 R~~~l~~~A~~IQk~~Rg~~aRk~y~k~---r~aai~IQ~~~R~~~~r~r 481 (602)
|++++..+++.||+.+|||++|+.|.++ +.|+.+||+++|+|..++.
T Consensus 1 Rd~~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~ 50 (64)
T 1wdc_A 1 RDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 50 (64)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 4678899999999999999999999999 7788899999999987654
No 15
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=98.07 E-value=3.9e-06 Score=66.47 Aligned_cols=44 Identities=25% Similarity=0.345 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhhhhh
Q psy18109 438 RLVDLAVLIQKVWRGYHQRKDFLKR---KRSQIIIASAWRSWRFVPI 481 (602)
Q Consensus 438 ~l~~~A~~IQk~~Rg~~aRk~y~k~---r~aai~IQ~~~R~~~~r~r 481 (602)
++..+++.||+.+|||++|+.|.++ +.|+.+||+++|+|..++.
T Consensus 2 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~ 48 (63)
T 2bl0_A 2 RIGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKN 48 (63)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 5678899999999999999999999 7788899999999987654
No 16
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=97.86 E-value=2e-05 Score=94.28 Aligned_cols=49 Identities=22% Similarity=0.267 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhh
Q psy18109 438 RLVDLAVLIQKVWRGYHQRKDFLKRKRSQIIIASAWRSWRFVPILFVLS 486 (602)
Q Consensus 438 ~l~~~A~~IQk~~Rg~~aRk~y~k~r~aai~IQ~~~R~~~~r~r~l~lt 486 (602)
+...+|+.||++||||.+|++|.++|.+++.||++|||+.+|+++..+.
T Consensus 814 r~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~~lr 862 (1080)
T 2dfs_A 814 RRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMML 862 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567889999999999999999999999999999999998888776554
No 17
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=96.68 E-value=0.0027 Score=48.93 Aligned_cols=34 Identities=26% Similarity=0.203 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 431 LEEFRRDRLVDLAVLIQKVWRGYHQRKDFLKRKR 464 (602)
Q Consensus 431 LE~~R~~~l~~~A~~IQk~~Rg~~aRk~y~k~r~ 464 (602)
+...+-..+..+++.||+.||||++|++|..++.
T Consensus 19 ~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~r~ 52 (58)
T 2ix7_C 19 LLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRR 52 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556677899999999999999999999875
No 18
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=95.79 E-value=0.01 Score=43.77 Aligned_cols=21 Identities=33% Similarity=0.498 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy18109 439 LVDLAVLIQKVWRGYHQRKDF 459 (602)
Q Consensus 439 l~~~A~~IQk~~Rg~~aRk~y 459 (602)
...+|+.||+.||||.+|+.|
T Consensus 27 ~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 27 KVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHhh
Confidence 345999999999999999987
No 19
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=94.37 E-value=0.012 Score=38.28 Aligned_cols=18 Identities=28% Similarity=0.486 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy18109 440 VDLAVLIQKVWRGYHQRK 457 (602)
Q Consensus 440 ~~~A~~IQk~~Rg~~aRk 457 (602)
..+|+.||++||+|+.|+
T Consensus 6 e~aA~vIQrA~R~yl~~~ 23 (27)
T 2kxw_B 6 EVSAIVIQRAYRRYLLKQ 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 456778888888887764
No 20
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=94.28 E-value=0.028 Score=37.76 Aligned_cols=19 Identities=21% Similarity=0.260 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy18109 440 VDLAVLIQKVWRGYHQRKD 458 (602)
Q Consensus 440 ~~~A~~IQk~~Rg~~aRk~ 458 (602)
.-+|+.||++||+|+.|+.
T Consensus 6 e~aA~vIQrA~R~yl~rr~ 24 (31)
T 2l53_B 6 EVSAMVIQRAFRRHLLQRS 24 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3578999999999998865
No 21
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=88.12 E-value=0.24 Score=32.18 Aligned_cols=17 Identities=29% Similarity=0.466 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHhhhhhh
Q psy18109 464 RSQIIIASAWRSWRFVP 480 (602)
Q Consensus 464 ~aai~IQ~~~R~~~~r~ 480 (602)
.+|++||++||+|+.++
T Consensus 7 ~aA~vIQrA~R~yl~~~ 23 (27)
T 2kxw_B 7 VSAIVIQRAYRRYLLKQ 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 36799999999998654
No 22
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=87.17 E-value=0.32 Score=32.64 Aligned_cols=17 Identities=24% Similarity=0.325 Sum_probs=14.5
Q ss_pred HHHHHHHHHHhhhhhhh
Q psy18109 465 SQIIIASAWRSWRFVPI 481 (602)
Q Consensus 465 aai~IQ~~~R~~~~r~r 481 (602)
+|++||+.||+|+.++.
T Consensus 8 aA~vIQrA~R~yl~rr~ 24 (31)
T 2l53_B 8 SAMVIQRAFRRHLLQRS 24 (31)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 67999999999997654
No 23
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=85.85 E-value=1.4 Score=40.29 Aligned_cols=23 Identities=17% Similarity=0.258 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 440 VDLAVLIQKVWRGYHQRKDFLKR 462 (602)
Q Consensus 440 ~~~A~~IQk~~Rg~~aRk~y~k~ 462 (602)
..+++.||+.+|||++|++|+-.
T Consensus 45 ~~~~i~iQktvR~~L~rkkhkPR 67 (148)
T 3gn4_A 45 AEACIKMQKTIRMWLCKRRHKPR 67 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhH
Confidence 45567777777777777777643
No 24
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=77.32 E-value=2.3 Score=39.69 Aligned_cols=27 Identities=22% Similarity=0.284 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy18109 435 RRDRLVDLAVLIQKVWRGYHQRKDFLK 461 (602)
Q Consensus 435 R~~~l~~~A~~IQk~~Rg~~aRk~y~k 461 (602)
+..+-..+|+.||++||+|+.|+.+++
T Consensus 125 ~~~~e~~aA~~IQra~R~~~~r~~~~~ 151 (168)
T 4dck_A 125 RRKHEEVSAMVIQRAFRRHLLQRSLKH 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 334556788999999999988877643
No 25
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=70.82 E-value=3.7 Score=47.78 Aligned_cols=43 Identities=5% Similarity=0.002 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhh--hhhhhhhh
Q psy18109 453 YHQRKDFLKRKRSQIIIASAWRSWRFVPILFVLST--SSMLILDH 495 (602)
Q Consensus 453 ~~aRk~y~k~r~aai~IQ~~~R~~~~r~r~l~lt~--~ai~ild~ 495 (602)
.+...|-.++...++.||++||||.+|+++..+.. .++.+|+.
T Consensus 769 ~LE~~r~~~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~ 813 (837)
T 1kk8_A 769 NLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQR 813 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555666777788999999999999999988742 45555554
No 26
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=70.14 E-value=0.78 Score=42.18 Aligned_cols=53 Identities=11% Similarity=0.021 Sum_probs=42.9
Q ss_pred HhhhhhhhHHhhhh-hhhhhhhhhhhhhhceecccceeEEEeccCCCcEEEEEecC
Q psy18109 474 RSWRFVPILFVLST-SSMLILDHRTLQIKYRVPASEIYRLSLSPYLDDIAVFHIRA 528 (602)
Q Consensus 474 R~~~~r~r~l~lt~-~ai~ild~~k~~~krri~l~~I~~vs~S~~~D~~~v~h~~~ 528 (602)
||+..|+|+++||+ ..+|.+|+.+..+|..||+..=. ++-...|..|+||+++
T Consensus 62 kGl~~kkR~liLT~~PrL~Yvdp~~~~~KGeIpls~~l--~ve~k~~~~F~I~Tp~ 115 (151)
T 1w1g_A 62 KGLFARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQEL--RPEAKNFKTFFVHTPN 115 (151)
T ss_dssp ETTEEEEEEEEEETTTEEEEEETTTTEEEEEECCCTTC--EEEESSSSEEEEEETT
T ss_pred ccCcceeEEEEEcCCceEEEEcCccccccceEecCCCe--eEEEcCCCEEEEECCC
Confidence 45668899999997 66788899988999999999754 4555558899999985
No 27
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=63.69 E-value=15 Score=33.50 Aligned_cols=22 Identities=14% Similarity=0.068 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHhhhhhhhHHh
Q psy18109 463 KRSQIIIASAWRSWRFVPILFV 484 (602)
Q Consensus 463 r~aai~IQ~~~R~~~~r~r~l~ 484 (602)
+++++.||+.+|+|.+|+++..
T Consensus 45 ~~~~i~iQktvR~~L~rkkhkP 66 (148)
T 3gn4_A 45 AEACIKMQKTIRMWLCKRRHKP 66 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhh
Confidence 4567999999999998887654
No 28
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=62.79 E-value=6.1 Score=45.68 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhh
Q psy18109 453 YHQRKDFLKRKRSQIIIASAWRSWRFVPILFVLST 487 (602)
Q Consensus 453 ~~aRk~y~k~r~aai~IQ~~~R~~~~r~r~l~lt~ 487 (602)
.+...|-.++.++++.||++||||.+|+++..+..
T Consensus 758 ~LE~~r~~~l~~~~~~iQ~~~Rg~l~R~~~~~~r~ 792 (795)
T 1w7j_A 758 YLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRR 792 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555556677788999999999999999988765
No 29
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=54.69 E-value=13 Score=28.56 Aligned_cols=35 Identities=6% Similarity=0.098 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHhhhh--hhhhhhhh
Q psy18109 461 KRKRSQIIIASAWRSWRFVPILFVLST--SSMLILDH 495 (602)
Q Consensus 461 k~r~aai~IQ~~~R~~~~r~r~l~lt~--~ai~ild~ 495 (602)
++...++.||+..|||.+|+.+..+.. .++.+++.
T Consensus 4 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQr 40 (64)
T 1wdc_A 4 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQR 40 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456678999999999999999887744 34444443
No 30
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=51.53 E-value=12 Score=28.70 Aligned_cols=35 Identities=14% Similarity=0.106 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHhhhh--hhhhhhhh
Q psy18109 461 KRKRSQIIIASAWRSWRFVPILFVLST--SSMLILDH 495 (602)
Q Consensus 461 k~r~aai~IQ~~~R~~~~r~r~l~lt~--~ai~ild~ 495 (602)
++...++.||+..|||.+|+.+..+.. .++.+++.
T Consensus 2 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQr 38 (63)
T 2bl0_A 2 RIGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQD 38 (63)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677899999999999999887744 34444443
No 31
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=44.45 E-value=18 Score=43.56 Aligned_cols=43 Identities=12% Similarity=0.038 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhh--hhhhhhhh
Q psy18109 453 YHQRKDFLKRKRSQIIIASAWRSWRFVPILFVLST--SSMLILDH 495 (602)
Q Consensus 453 ~~aRk~y~k~r~aai~IQ~~~R~~~~r~r~l~lt~--~ai~ild~ 495 (602)
++...+-.++..+++.||++||||.+|++|..+.. .++.+++.
T Consensus 782 ~LE~~r~~~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~ 826 (1184)
T 1i84_S 782 HLEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQY 826 (1184)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555666677788999999999999999988753 45555554
No 32
>2ou3_A Tellurite resistance protein of COG3793; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE I3A; 1.85A {Nostoc punctiforme} SCOP: a.287.1.1
Probab=41.57 E-value=47 Score=30.03 Aligned_cols=32 Identities=13% Similarity=-0.030 Sum_probs=21.8
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCchhhHHHHH
Q psy18109 46 SPHLDDKACFLRTRKACEALGFTPDEILDIFK 77 (602)
Q Consensus 46 ~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~ 77 (602)
.+|.-|.++-+.+...|+.+|+++++...+..
T Consensus 42 ADG~v~~~E~~~i~~~~~~~~l~~~~~~~l~~ 73 (161)
T 2ou3_A 42 ADGVISPEEKDWALGFCASWGVADWVIEDLKT 73 (161)
T ss_dssp SSSCCCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHHHHcCCCHHHHHHHhh
Confidence 35555666777777777778888877665544
No 33
>3dvk_B Voltage-dependent R-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.30A {Rattus norvegicus} PDB: 3dvm_B
Probab=39.60 E-value=16 Score=22.70 Aligned_cols=14 Identities=7% Similarity=0.268 Sum_probs=8.2
Q ss_pred HHHHHHHHHhhhhh
Q psy18109 466 QIIIASAWRSWRFV 479 (602)
Q Consensus 466 ai~IQ~~~R~~~~r 479 (602)
+..||-+||.++.|
T Consensus 9 ~llI~d~~r~~k~r 22 (23)
T 3dvk_B 9 AMMIMDYYKQSKVK 22 (26)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc
Confidence 35566666666544
No 34
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=38.81 E-value=15 Score=34.29 Aligned_cols=20 Identities=25% Similarity=0.255 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhhhhhhhHHh
Q psy18109 465 SQIIIASAWRSWRFVPILFV 484 (602)
Q Consensus 465 aai~IQ~~~R~~~~r~r~l~ 484 (602)
||+.||++||+|+.|+....
T Consensus 132 aA~~IQra~R~~~~r~~~~~ 151 (168)
T 4dck_A 132 SAMVIQRAFRRHLLQRSLKH 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccc
Confidence 66999999999987765543
No 35
>3dve_B Voltage-dependent N-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.35A {Oryctolagus cuniculus} PDB: 3dvj_B
Probab=32.79 E-value=19 Score=22.33 Aligned_cols=16 Identities=6% Similarity=0.171 Sum_probs=11.4
Q ss_pred HHHHHHHHHHhhhhhh
Q psy18109 465 SQIIIASAWRSWRFVP 480 (602)
Q Consensus 465 aai~IQ~~~R~~~~r~ 480 (602)
|+..||-+||.++.++
T Consensus 7 AallI~d~~r~~k~~~ 22 (23)
T 3dve_B 7 AALMIFDFYKQNKTSR 22 (26)
T ss_dssp HHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHhhcc
Confidence 4577888888877553
No 36
>3bxl_B CAM, voltage-dependent R-type calcium channel subunit alpha-1E peptide; ION channel, calmodulin, IQ domain, facillitation, inactivation; 2.30A {Rattus norvegicus} PDB: 3bxk_B
Probab=28.53 E-value=34 Score=21.79 Aligned_cols=17 Identities=6% Similarity=0.194 Sum_probs=12.8
Q ss_pred HHHHHHHHHHhhhhhhh
Q psy18109 465 SQIIIASAWRSWRFVPI 481 (602)
Q Consensus 465 aai~IQ~~~R~~~~r~r 481 (602)
|+..|+-+||.++.++.
T Consensus 4 Aa~mI~e~yrq~K~~r~ 20 (26)
T 3bxl_B 4 AAMMIMDYYKQSKVKKQ 20 (26)
T ss_pred HHHHHHHHHHHHHhhhh
Confidence 45778888888887654
No 37
>1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 3tgm_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* ...
Probab=22.50 E-value=1.7e+02 Score=28.15 Aligned_cols=38 Identities=16% Similarity=0.282 Sum_probs=28.5
Q ss_pred CCcchHHHHHH-HHHHHHHcCCCchhhHHHHHHHHHHHh
Q psy18109 47 PHLDDKACFLR-TRKACEALGFTPDEILDIFKVVASVLK 84 (602)
Q Consensus 47 ~~~dD~~~f~~-~~~Am~~lGfs~~e~~~I~~ilAaILh 84 (602)
+++.|...|+. .+++|+.++++++++..|..---.+..
T Consensus 170 ~~~~~~~~~k~~fr~~Ld~~~l~~~e~~~ii~eA~~aF~ 208 (233)
T 1n45_A 170 PNIASATKFKQLYRSRMNSLEMTPAVRQRVIEEAKTAFL 208 (233)
T ss_dssp TTCSCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 35568889998 999999999999988776544433333
No 38
>3f6w_A XRE-family like protein; helix-turn-helix, DNA binding protein, xenobiotic response E family of transcriptional regulators; HET: MSE BTB; 1.85A {Pseudomonas syringae PV}
Probab=21.49 E-value=62 Score=25.01 Aligned_cols=61 Identities=16% Similarity=0.141 Sum_probs=38.2
Q ss_pred HHHHHHHHcCCCchhhHHHHHHHHHHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhhc
Q psy18109 57 RTRKACEALGFTPDEILDIFKVVASVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAIT 129 (602)
Q Consensus 57 ~~~~Am~~lGfs~~e~~~I~~ilAaILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aLt 129 (602)
.++.+.+..|++.+|......+=.+ .+.+++ .|. ...+.+.+..+|..||++++.|...+.
T Consensus 18 ~l~~~R~~~gltq~elA~~~gis~~--~is~~e-------~g~---~~~~~~~l~~l~~~l~~~~~~l~~~~~ 78 (83)
T 3f6w_A 18 LLLEARSAAGITQKELAARLGRPQS--FVSKTE-------NAE---RRLDVIEFMDFCRGIGTDPYALLSKLE 78 (83)
T ss_dssp HHHHHHHHHTCCHHHHHHHHTSCHH--HHHHHH-------TTS---SCCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHCcCHH--HHHHHH-------CCC---CCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 4667778889997776554332111 122222 221 124567899999999999999876553
No 39
>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH MOT protein structure initiative, midwest center for structural genomics; 1.55A {Archaeoglobus fulgidus} SCOP: a.4.5.50
Probab=20.32 E-value=99 Score=24.67 Aligned_cols=50 Identities=20% Similarity=0.409 Sum_probs=32.1
Q ss_pred HHHHHHHHHHcCCCchhhHHHHHHHHHHHhhcceeeEeccCCCCCCceeecChHHHHHHhhhcCCCHHhHhhhh
Q psy18109 55 FLRTRKACEALGFTPDEILDIFKVVASVLKLGNVVFIPSNNIDGTEGCTVSNDYELYEVCDLLSMDCTILQGAI 128 (602)
Q Consensus 55 f~~~~~Am~~lGfs~~e~~~I~~ilAaILhLGNi~F~~~~~~~~~~~~~i~~~~~l~~~a~LLgv~~~~L~~aL 128 (602)
+..+...|+.+|+++.+. .|+..+..-|.+. ...+|+.+|++...+.+.|
T Consensus 6 ~~~~~~~l~~~~l~~~~~----~il~~l~~~~~~s--------------------~~ela~~l~is~~tv~~~l 55 (109)
T 1sfx_A 6 LGELVKALEKLSFKPSDV----RIYSLLLERGGMR--------------------VSEIARELDLSARFVRDRL 55 (109)
T ss_dssp HHHHHHHHHHTCCCHHHH----HHHHHHHHHCCBC--------------------HHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHH----HHHHHHHHcCCCC--------------------HHHHHHHHCCCHHHHHHHH
Confidence 455677788899987643 3344433333222 4568889999998776665
Done!