Query psy18110
Match_columns 249
No_of_seqs 264 out of 2316
Neff 8.4
Searched_HMMs 46136
Date Fri Aug 16 22:47:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18110.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18110hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372|consensus 100.0 7.2E-57 1.6E-61 367.1 13.0 202 47-249 32-235 (303)
2 PTZ00480 serine/threonine-prot 100.0 7E-53 1.5E-57 367.0 17.8 206 44-249 45-251 (320)
3 KOG0374|consensus 100.0 4.8E-53 1E-57 369.2 14.4 205 45-249 46-253 (331)
4 PTZ00244 serine/threonine-prot 100.0 2.2E-52 4.7E-57 361.7 17.9 208 42-249 36-244 (294)
5 cd07420 MPP_RdgC Drosophila me 100.0 3E-52 6.5E-57 363.6 18.0 206 43-249 32-273 (321)
6 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 7.8E-52 1.7E-56 358.6 17.8 207 43-249 35-242 (293)
7 smart00156 PP2Ac Protein phosp 100.0 2E-51 4.4E-56 353.4 18.9 205 45-249 15-220 (271)
8 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.8E-51 3.9E-56 355.1 17.0 206 43-249 27-234 (285)
9 PTZ00239 serine/threonine prot 100.0 3.2E-51 7E-56 355.5 17.4 205 44-249 29-235 (303)
10 cd07416 MPP_PP2B PP2B, metallo 100.0 8.1E-51 1.8E-55 354.4 18.5 207 43-249 28-242 (305)
11 KOG0373|consensus 100.0 3.4E-51 7.3E-56 329.3 10.0 201 48-249 36-238 (306)
12 cd07417 MPP_PP5_C PP5, C-termi 100.0 4.3E-50 9.4E-55 350.6 16.6 191 58-249 61-253 (316)
13 cd07418 MPP_PP7 PP7, metalloph 100.0 4.8E-49 1.1E-53 348.3 17.9 207 42-249 46-293 (377)
14 cd07419 MPP_Bsu1_C Arabidopsis 100.0 4.2E-48 9.2E-53 338.6 17.0 208 42-249 32-262 (311)
15 KOG0375|consensus 100.0 9.8E-49 2.1E-53 334.3 11.3 204 46-249 76-287 (517)
16 KOG0371|consensus 100.0 4.4E-46 9.6E-51 305.8 9.6 203 46-249 48-252 (319)
17 KOG0377|consensus 100.0 6.9E-38 1.5E-42 273.6 8.6 191 58-249 166-382 (631)
18 cd00144 MPP_PPP_family phospho 100.0 3E-33 6.6E-38 234.7 16.4 179 60-249 1-189 (225)
19 KOG0376|consensus 100.0 7.8E-34 1.7E-38 252.6 5.6 191 58-249 215-407 (476)
20 TIGR00668 apaH bis(5'-nucleosy 100.0 1.5E-29 3.2E-34 216.0 10.6 163 57-223 1-170 (279)
21 cd07422 MPP_ApaH Escherichia c 100.0 1.3E-28 2.8E-33 209.8 11.8 161 59-223 1-168 (257)
22 PRK00166 apaH diadenosine tetr 100.0 4.6E-28 9.9E-33 208.5 12.5 124 57-184 1-131 (275)
23 PRK13625 bis(5'-nucleosyl)-tet 99.9 1.4E-27 3E-32 203.3 9.9 121 58-180 2-146 (245)
24 cd07413 MPP_PA3087 Pseudomonas 99.9 2.2E-26 4.7E-31 193.1 14.0 115 60-177 2-143 (222)
25 cd07425 MPP_Shelphs Shewanella 99.9 6E-26 1.3E-30 188.6 14.5 155 60-249 1-176 (208)
26 cd07423 MPP_PrpE Bacillus subt 99.9 4.8E-25 1E-29 186.5 11.4 121 58-180 2-143 (234)
27 PRK11439 pphA serine/threonine 99.9 3.5E-25 7.6E-30 185.4 8.1 116 56-177 16-146 (218)
28 PHA02239 putative protein phos 99.9 3.3E-24 7.1E-29 180.9 10.5 154 58-233 2-202 (235)
29 cd07421 MPP_Rhilphs Rhilph pho 99.9 3.7E-24 8E-29 183.2 10.7 130 58-188 3-224 (304)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 1.9E-23 4.2E-28 173.6 8.8 116 58-179 2-132 (207)
31 PRK09968 serine/threonine-spec 99.9 8.8E-23 1.9E-27 170.8 8.0 114 58-177 16-144 (218)
32 KOG0372|consensus 99.6 4.9E-17 1.1E-21 133.8 -0.0 55 1-55 236-290 (303)
33 KOG0373|consensus 99.5 1.4E-15 3E-20 123.5 1.3 55 1-55 239-294 (306)
34 PF00149 Metallophos: Calcineu 99.5 7.8E-13 1.7E-17 103.5 11.3 156 58-249 2-197 (200)
35 PRK09453 phosphodiesterase; Pr 99.3 1.2E-11 2.6E-16 100.7 8.0 68 58-129 2-77 (182)
36 KOG0374|consensus 99.2 2E-12 4.3E-17 113.8 1.5 50 1-50 254-303 (331)
37 cd00841 MPP_YfcE Escherichia c 99.2 6.6E-11 1.4E-15 93.5 9.9 83 59-178 2-87 (155)
38 TIGR00040 yfcE phosphoesterase 99.2 5.7E-11 1.2E-15 94.4 8.3 62 58-128 2-64 (158)
39 PF12850 Metallophos_2: Calcin 99.2 7.9E-11 1.7E-15 92.6 8.1 61 58-130 2-62 (156)
40 cd07417 MPP_PP5_C PP5, C-termi 99.1 1.9E-11 4.2E-16 107.4 2.9 56 1-56 254-310 (316)
41 cd07388 MPP_Tt1561 Thermus the 99.1 7.1E-10 1.5E-14 93.0 11.3 71 57-128 5-75 (224)
42 PTZ00480 serine/threonine-prot 99.1 4.6E-11 1E-15 104.8 2.3 51 1-51 252-302 (320)
43 cd07379 MPP_239FB Homo sapiens 99.0 1E-09 2.2E-14 84.9 7.6 109 59-248 2-112 (135)
44 PTZ00239 serine/threonine prot 99.0 1E-10 2.2E-15 102.2 1.9 52 1-52 236-288 (303)
45 KOG0371|consensus 99.0 5.5E-11 1.2E-15 99.0 0.1 53 1-53 253-305 (319)
46 cd07397 MPP_DevT Myxococcus xa 99.0 2.2E-09 4.7E-14 90.5 8.8 110 59-178 3-159 (238)
47 cd00838 MPP_superfamily metall 99.0 5.5E-09 1.2E-13 78.5 10.2 67 60-126 1-69 (131)
48 cd07418 MPP_PP7 PP7, metalloph 98.8 1.5E-09 3.3E-14 97.0 2.6 49 2-50 307-366 (377)
49 cd07394 MPP_Vps29 Homo sapiens 98.8 4.8E-08 1E-12 79.2 9.7 58 59-128 2-65 (178)
50 cd07403 MPP_TTHA0053 Thermus t 98.8 7.2E-08 1.6E-12 74.1 9.8 56 60-126 1-56 (129)
51 PRK05340 UDP-2,3-diacylglucosa 98.7 1.1E-07 2.4E-12 80.7 9.8 71 57-129 1-84 (241)
52 cd07404 MPP_MS158 Microscilla 98.7 5.8E-08 1.3E-12 77.5 6.6 66 60-128 2-68 (166)
53 cd07400 MPP_YydB Bacillus subt 98.6 6E-07 1.3E-11 69.8 11.3 53 74-127 26-80 (144)
54 cd07392 MPP_PAE1087 Pyrobaculu 98.5 1.1E-07 2.5E-12 76.8 5.4 63 60-128 2-65 (188)
55 TIGR01854 lipid_A_lpxH UDP-2,3 98.5 2.7E-07 5.9E-12 77.9 7.4 168 60-248 2-193 (231)
56 KOG0376|consensus 98.5 7.3E-08 1.6E-12 87.1 2.6 55 2-56 409-464 (476)
57 PRK11340 phosphodiesterase Yae 98.4 4.6E-07 1E-11 78.3 6.0 70 57-128 50-125 (271)
58 cd07402 MPP_GpdQ Enterobacter 98.4 4.8E-06 1E-10 70.2 11.0 65 60-128 3-83 (240)
59 KOG0377|consensus 98.3 3.3E-07 7.2E-12 81.8 3.1 49 2-50 384-432 (631)
60 cd07399 MPP_YvnB Bacillus subt 98.3 1.5E-06 3.2E-11 72.6 6.8 67 60-127 4-81 (214)
61 cd07385 MPP_YkuE_C Bacillus su 98.3 7.1E-07 1.5E-11 74.4 4.4 69 59-129 4-77 (223)
62 COG0622 Predicted phosphoester 98.3 5.5E-06 1.2E-10 66.7 8.4 65 57-129 2-66 (172)
63 cd07383 MPP_Dcr2 Saccharomyces 98.2 7.7E-06 1.7E-10 67.3 9.2 46 81-126 39-87 (199)
64 TIGR03729 acc_ester putative p 98.2 1.9E-06 4.1E-11 73.0 5.2 67 59-128 2-74 (239)
65 COG0639 ApaH Diadenosine tetra 98.2 1.2E-06 2.6E-11 67.5 3.2 116 133-249 6-130 (155)
66 cd07398 MPP_YbbF-LpxH Escheric 98.1 8.8E-06 1.9E-10 67.5 7.7 69 60-129 1-83 (217)
67 PRK04036 DNA polymerase II sma 98.1 7.2E-06 1.6E-10 76.9 6.9 112 58-176 245-388 (504)
68 cd07396 MPP_Nbla03831 Homo sap 98.1 6.9E-06 1.5E-10 70.8 6.3 71 60-130 4-88 (267)
69 cd07391 MPP_PF1019 Pyrococcus 98.1 9E-06 1.9E-10 65.4 6.5 60 70-129 28-89 (172)
70 TIGR00619 sbcd exonuclease Sbc 98.1 7E-06 1.5E-10 70.3 5.6 71 58-128 2-88 (253)
71 COG2908 Uncharacterized protei 98.0 3.7E-05 8.1E-10 64.2 9.2 164 60-248 1-195 (237)
72 cd07390 MPP_AQ1575 Aquifex aeo 98.0 1.6E-05 3.5E-10 63.8 5.7 44 82-130 41-84 (168)
73 cd08165 MPP_MPPE1 human MPPE1 97.9 1.6E-05 3.4E-10 63.1 5.4 48 82-129 37-90 (156)
74 PHA02546 47 endonuclease subun 97.9 1.3E-05 2.8E-10 71.5 5.5 71 58-128 2-89 (340)
75 COG2129 Predicted phosphoester 97.9 0.00024 5.2E-09 58.9 10.9 73 57-130 4-79 (226)
76 cd07395 MPP_CSTP1 Homo sapiens 97.9 0.00021 4.6E-09 61.2 11.2 58 71-128 35-99 (262)
77 TIGR00024 SbcD_rel_arch putati 97.8 3.8E-05 8.1E-10 64.6 6.2 69 57-129 15-103 (225)
78 PRK11148 cyclic 3',5'-adenosin 97.8 3.1E-05 6.6E-10 67.0 5.7 69 57-127 15-97 (275)
79 cd00840 MPP_Mre11_N Mre11 nucl 97.8 3.1E-05 6.8E-10 64.2 5.4 60 71-130 29-91 (223)
80 TIGR00583 mre11 DNA repair pro 97.7 8.1E-05 1.7E-09 67.8 6.4 73 57-129 4-124 (405)
81 cd07393 MPP_DR1119 Deinococcus 97.6 9.5E-05 2.1E-09 62.4 5.8 45 82-128 40-84 (232)
82 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.6 0.00013 2.9E-09 62.7 6.2 69 60-128 2-86 (262)
83 COG1409 Icc Predicted phosphoh 97.5 0.0002 4.4E-09 61.6 6.6 72 59-132 3-82 (301)
84 PRK10966 exonuclease subunit S 97.5 0.00012 2.7E-09 66.8 4.6 70 58-128 2-87 (407)
85 cd07386 MPP_DNA_pol_II_small_a 97.5 0.00019 4.1E-09 60.9 5.1 68 60-129 2-95 (243)
86 cd07401 MPP_TMEM62_N Homo sapi 97.4 0.00031 6.7E-09 60.2 5.7 69 61-129 4-90 (256)
87 cd08166 MPP_Cdc1_like_1 unchar 97.3 0.00043 9.4E-09 56.7 5.7 48 82-129 41-94 (195)
88 cd07384 MPP_Cdc1_like Saccharo 97.3 0.00054 1.2E-08 55.1 6.1 50 80-129 42-101 (171)
89 cd08163 MPP_Cdc1 Saccharomyces 97.3 0.0079 1.7E-07 51.6 13.2 24 226-249 202-225 (257)
90 COG1408 Predicted phosphohydro 97.2 0.00058 1.3E-08 59.4 5.7 70 59-130 47-120 (284)
91 KOG0375|consensus 97.2 7.5E-05 1.6E-09 65.5 -0.3 50 3-53 290-345 (517)
92 cd07380 MPP_CWF19_N Schizosacc 97.0 0.0019 4E-08 50.9 5.6 66 60-126 1-68 (150)
93 cd00839 MPP_PAPs purple acid p 97.0 0.0013 2.9E-08 57.1 5.3 68 59-130 7-83 (294)
94 cd00845 MPP_UshA_N_like Escher 96.9 0.00097 2.1E-08 56.7 4.1 64 60-128 4-82 (252)
95 PF14582 Metallophos_3: Metall 96.8 0.00061 1.3E-08 56.7 2.0 71 58-129 7-103 (255)
96 COG1407 Predicted ICC-like pho 96.8 0.004 8.6E-08 52.4 6.4 102 57-181 20-143 (235)
97 COG0420 SbcD DNA repair exonuc 96.8 0.0031 6.8E-08 57.3 6.3 61 69-129 26-89 (390)
98 COG4186 Predicted phosphoester 96.7 0.0041 9E-08 48.7 5.4 45 81-129 43-87 (186)
99 cd08164 MPP_Ted1 Saccharomyces 96.6 0.0061 1.3E-07 50.0 6.0 66 64-129 24-112 (193)
100 cd07410 MPP_CpdB_N Escherichia 96.3 0.0032 6.9E-08 54.5 3.1 62 61-127 5-94 (277)
101 PLN02533 probable purple acid 95.7 0.011 2.4E-07 54.5 3.7 69 58-129 141-212 (427)
102 cd07408 MPP_SA0022_N Staphyloc 95.6 0.019 4.1E-07 49.2 4.8 63 60-127 4-81 (257)
103 cd07378 MPP_ACP5 Homo sapiens 95.2 0.027 5.8E-07 48.4 4.5 21 229-249 190-210 (277)
104 KOG1432|consensus 95.2 0.14 3.1E-06 45.2 8.7 49 81-130 98-149 (379)
105 PF06874 FBPase_2: Firmicute f 95.1 0.023 5.1E-07 53.8 4.0 42 84-130 185-226 (640)
106 cd07412 MPP_YhcR_N Bacillus su 95.1 0.016 3.5E-07 50.5 2.7 63 61-128 5-88 (288)
107 cd00842 MPP_ASMase acid sphing 94.9 0.058 1.3E-06 47.0 5.8 69 61-130 42-124 (296)
108 cd07406 MPP_CG11883_N Drosophi 94.4 0.067 1.5E-06 45.8 4.7 59 64-127 18-82 (257)
109 cd07411 MPP_SoxB_N Thermus the 94.3 0.06 1.3E-06 46.2 4.4 56 67-128 33-95 (264)
110 COG1768 Predicted phosphohydro 94.3 0.073 1.6E-06 42.9 4.4 45 82-130 42-88 (230)
111 KOG3662|consensus 93.8 0.14 3E-06 46.6 5.7 56 72-127 81-143 (410)
112 cd07409 MPP_CD73_N CD73 ecto-5 93.6 0.14 3E-06 44.5 5.2 57 67-128 32-94 (281)
113 PRK09419 bifunctional 2',3'-cy 92.7 0.097 2.1E-06 54.3 3.4 63 60-127 664-735 (1163)
114 KOG2863|consensus 92.2 0.35 7.6E-06 43.1 5.7 72 58-129 2-89 (456)
115 TIGR00282 metallophosphoestera 91.0 0.23 5E-06 42.8 3.3 65 58-127 2-70 (266)
116 COG3855 Fbp Uncharacterized pr 91.0 0.17 3.8E-06 46.3 2.6 41 85-130 192-232 (648)
117 KOG3339|consensus 90.8 3.6 7.8E-05 33.4 9.6 85 85-174 40-140 (211)
118 cd07407 MPP_YHR202W_N Saccharo 90.1 0.34 7.4E-06 42.2 3.7 38 86-128 53-97 (282)
119 COG0737 UshA 5'-nucleotidase/2 89.7 0.38 8.3E-06 45.4 4.0 62 61-127 31-114 (517)
120 cd08162 MPP_PhoA_N Synechococc 89.7 0.5 1.1E-05 41.8 4.5 62 61-127 5-90 (313)
121 cd07405 MPP_UshA_N Escherichia 89.0 0.43 9.3E-06 41.5 3.5 63 61-128 5-87 (285)
122 PF04042 DNA_pol_E_B: DNA poly 88.6 0.48 1E-05 39.0 3.3 62 69-130 16-93 (209)
123 COG1311 HYS2 Archaeal DNA poly 88.1 1.6 3.4E-05 40.5 6.5 111 60-175 229-365 (481)
124 PRK09420 cpdB bifunctional 2', 87.9 0.51 1.1E-05 46.0 3.5 64 59-127 28-121 (649)
125 TIGR01390 CycNucDiestase 2',3' 87.6 0.5 1.1E-05 45.8 3.3 62 61-127 7-98 (626)
126 PRK09419 bifunctional 2',3'-cy 87.0 0.49 1.1E-05 49.2 3.0 63 60-127 45-138 (1163)
127 cd07382 MPP_DR1281 Deinococcus 86.7 0.95 2.1E-05 38.8 4.1 64 59-127 2-69 (255)
128 TIGR01530 nadN NAD pyrophospha 82.6 2.1 4.6E-05 40.8 4.9 56 67-127 32-93 (550)
129 PRK11907 bifunctional 2',3'-cy 82.5 1.2 2.5E-05 44.5 3.2 63 60-127 119-212 (814)
130 PRK09558 ushA bifunctional UDP 78.3 2 4.3E-05 41.0 3.1 62 61-127 39-120 (551)
131 KOG1378|consensus 77.0 2.2 4.7E-05 39.4 2.8 71 58-131 149-224 (452)
132 PTZ00422 glideosome-associated 76.5 3.5 7.5E-05 37.6 4.0 69 59-127 29-108 (394)
133 PRK09418 bifunctional 2',3'-cy 75.9 2.4 5.3E-05 42.1 3.1 63 60-127 43-141 (780)
134 KOG3947|consensus 74.3 3.4 7.5E-05 35.6 3.2 66 58-130 63-128 (305)
135 KOG2476|consensus 72.1 6 0.00013 36.6 4.3 67 58-125 7-75 (528)
136 KOG3325|consensus 69.9 6 0.00013 31.1 3.3 60 60-128 4-66 (183)
137 PTZ00235 DNA polymerase epsilo 67.0 20 0.00043 31.3 6.3 72 58-129 29-123 (291)
138 PF12982 DUF3866: Protein of u 62.5 16 0.00035 32.2 5.0 76 32-113 66-141 (320)
139 KOG2310|consensus 57.1 31 0.00066 32.9 6.0 40 68-107 37-76 (646)
140 PF11372 DUF3173: Domain of un 51.2 4.3 9.4E-05 26.5 -0.3 17 1-17 30-46 (59)
141 cd07387 MPP_PolD2_C PolD2 (DNA 51.2 65 0.0014 27.7 6.8 87 85-175 44-152 (257)
142 PF02875 Mur_ligase_C: Mur lig 48.5 28 0.00061 24.2 3.6 67 58-124 13-81 (91)
143 PF06874 FBPase_2: Firmicute f 44.7 16 0.00034 35.3 2.2 22 58-79 34-55 (640)
144 PF13258 DUF4049: Domain of un 43.7 40 0.00087 28.6 4.2 88 85-178 86-186 (318)
145 KOG3425|consensus 43.4 1E+02 0.0022 23.3 5.9 60 69-128 12-79 (128)
146 PF12641 Flavodoxin_3: Flavodo 42.9 1E+02 0.0023 24.3 6.4 28 84-111 39-66 (160)
147 TIGR00282 metallophosphoestera 42.1 39 0.00084 29.2 4.0 39 86-128 2-41 (266)
148 PF09949 DUF2183: Uncharacteri 37.2 1.2E+02 0.0025 22.0 5.4 44 69-121 52-95 (100)
149 cd07382 MPP_DR1281 Deinococcus 36.7 38 0.00083 29.0 3.2 39 86-127 1-39 (255)
150 COG3855 Fbp Uncharacterized pr 35.0 22 0.00047 33.2 1.4 20 60-79 41-60 (648)
151 COG1692 Calcineurin-like phosp 31.9 81 0.0018 27.0 4.2 64 58-126 2-69 (266)
152 PRK10773 murF UDP-N-acetylmura 30.8 1.3E+02 0.0029 27.8 6.0 65 58-123 326-392 (453)
153 PLN00084 photosystem II subuni 30.4 30 0.00066 27.6 1.4 35 90-125 9-50 (214)
154 COG3433 Aryl carrier domain [S 29.2 35 0.00075 23.3 1.3 22 92-113 23-44 (74)
155 KOG3770|consensus 25.9 1.8E+02 0.0038 28.1 5.8 69 63-131 185-266 (577)
156 TIGR03729 acc_ester putative p 24.2 78 0.0017 26.3 3.0 23 226-248 195-217 (239)
157 PRK07308 flavodoxin; Validated 21.4 1E+02 0.0022 23.4 3.0 29 64-92 63-92 (146)
158 PF04263 TPK_catalytic: Thiami 20.7 1E+02 0.0022 23.1 2.7 38 83-121 84-121 (123)
159 cd01445 TST_Repeats Thiosulfat 20.6 3.6E+02 0.0077 20.4 5.8 52 69-123 80-131 (138)
160 PRK10997 yieM hypothetical pro 20.2 3.5E+02 0.0076 25.6 6.6 43 84-127 417-460 (487)
No 1
>KOG0372|consensus
Probab=100.00 E-value=7.2e-57 Score=367.08 Aligned_cols=202 Identities=53% Similarity=1.040 Sum_probs=189.9
Q ss_pred hhhhhcccCCCCCC-CCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCc
Q psy18110 47 LKTKYEQGLFSSPL-VPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 125 (249)
Q Consensus 47 f~~~~~~~~~~~~~-~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNH 125 (249)
+-.+++-.....|+ |+|||||++.+|..+++..|-++.+.++|||||||||..|+|++.+|..||.+||+++++|||||
T Consensus 32 L~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNH 111 (303)
T KOG0372|consen 32 LVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNH 111 (303)
T ss_pred HhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccc
Confidence 33344444455666 55999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhcCcHHHHHHHhc-HHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchhhHH
Q psy18110 126 ECASINRIYGFYDECKRRFN-IKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDL 204 (249)
Q Consensus 126 E~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~~dl 204 (249)
|.+.++..|||++||.++|+ ...|+.+.+.|+.||++++|+++++|||||++|+++++++|+.+.|..+.|..+..+|+
T Consensus 112 EsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~Dl 191 (303)
T KOG0372|consen 112 ESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDL 191 (303)
T ss_pred hhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchhe
Confidence 99999999999999999995 68999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 205 LWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 205 lW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
|||||.+. ++|.-++||.|++||+++++.|++.||+.+|+|+||
T Consensus 192 lWSDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQ 235 (303)
T KOG0372|consen 192 LWSDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQ 235 (303)
T ss_pred eccCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHHHHHHH
Confidence 99999964 599999999999999999999999999999999997
No 2
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=7e-53 Score=367.04 Aligned_cols=206 Identities=76% Similarity=1.382 Sum_probs=192.9
Q ss_pred hhhhhhhhcccCCCC-CCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEc
Q psy18110 44 FQILKTKYEQGLFSS-PLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122 (249)
Q Consensus 44 f~if~~~~~~~~~~~-~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~ 122 (249)
..+|+.++.-..... .+|||||||++.+|.++++..++++.+++||||||||||++|+|++.+++.+|..+|.++++||
T Consensus 45 ~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llR 124 (320)
T PTZ00480 45 RDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 124 (320)
T ss_pred HHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEe
Confidence 345666555433444 4567999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccchhhhcCcHHHHHHHhcHHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchhh
Q psy18110 123 GNHECASINRIYGFYDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLC 202 (249)
Q Consensus 123 GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~~ 202 (249)
||||...++..++|..++..+|+..+|..+.+.|..||++++++++++||||||+|.+..+++++.+.||.+.++.+.+.
T Consensus 125 GNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~ 204 (320)
T PTZ00480 125 GNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLC 204 (320)
T ss_pred cccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhheecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 203 DLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 203 dllW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
|+|||||.++..+|.+++||.|+.||++++++||++|++++||||||
T Consensus 205 dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~Hq 251 (320)
T PTZ00480 205 DLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRAHQ 251 (320)
T ss_pred heeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEcCc
Confidence 99999999888899999999999999999999999999999999998
No 3
>KOG0374|consensus
Probab=100.00 E-value=4.8e-53 Score=369.23 Aligned_cols=205 Identities=71% Similarity=1.253 Sum_probs=195.3
Q ss_pred hhhhhhhcccCCCCCCC-CcCCCCCHHHHHHHHHhCC-CCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEc
Q psy18110 45 QILKTKYEQGLFSSPLV-PGDIHGQYYDLLRLFEYGG-FPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122 (249)
Q Consensus 45 ~if~~~~~~~~~~~~~~-igDiHG~~~~l~~ll~~~~-~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~ 122 (249)
.+|...+.....+.|+. +|||||++.+|.+++...+ +|+..++||||||||||++|+|++.++.++|+++|++++++|
T Consensus 46 ~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLR 125 (331)
T KOG0374|consen 46 EIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLR 125 (331)
T ss_pred HHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEec
Confidence 45666555555666775 5999999999999999999 999999999999999999999999999999999999999999
Q ss_pred CCccccchhhhcCcHHHHHHHhc-HHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchh
Q psy18110 123 GNHECASINRIYGFYDECKRRFN-IKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLL 201 (249)
Q Consensus 123 GNHE~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~ 201 (249)
||||.+.++..|||++||.++|+ ..+|..+...|+.||+++.|+++++|+|||++|.+.++++++++.||.+.++.+++
T Consensus 126 GNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll 205 (331)
T KOG0374|consen 126 GNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLL 205 (331)
T ss_pred cccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHHhhccCCcCCCcccee
Confidence 99999999999999999999998 69999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 202 CDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 202 ~dllW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
.|++||||..+..+|.+|.||.++.||++++++||+++++++||||||
T Consensus 206 ~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHq 253 (331)
T KOG0374|consen 206 CDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQ 253 (331)
T ss_pred eeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCc
Confidence 999999999999999999999999999999999999999999999998
No 4
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=2.2e-52 Score=361.72 Aligned_cols=208 Identities=61% Similarity=1.107 Sum_probs=192.6
Q ss_pred hhhhhhhhhhcccCCCCC-CCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEE
Q psy18110 42 CSFQILKTKYEQGLFSSP-LVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 120 (249)
Q Consensus 42 ~~f~if~~~~~~~~~~~~-~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~ 120 (249)
....+|+.++.-.....| +||||||||+.+|.++++.+++++.+++||||||||||++|.|++.++..+|..+|.++++
T Consensus 36 ~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~l 115 (294)
T PTZ00244 36 EVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFL 115 (294)
T ss_pred HHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEE
Confidence 334556655544333444 5779999999999999999999998899999999999999999999999999999999999
Q ss_pred EcCCccccchhhhcCcHHHHHHHhcHHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcch
Q psy18110 121 LRGNHECASINRIYGFYDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL 200 (249)
Q Consensus 121 l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~ 200 (249)
+|||||.+.++..++|..++..+|+..+|..+.++|+.||++++++++++|||||++|.+.++++++.+.||.+.+..+.
T Consensus 116 lrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~ 195 (294)
T PTZ00244 116 LRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRGI 195 (294)
T ss_pred EecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEecCeeEEEcCCCCchhhHHHHhhhhccccCCCccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 201 LCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 201 ~~dllW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
+.|++||||.....+|.+++||.|+.||++++++||++||+++||||||
T Consensus 196 ~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~Hq 244 (294)
T PTZ00244 196 LCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRAHQ 244 (294)
T ss_pred hheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEcCc
Confidence 9999999999888899999999999999999999999999999999998
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=3e-52 Score=363.55 Aligned_cols=206 Identities=35% Similarity=0.616 Sum_probs=179.2
Q ss_pred hhhhhhhhhcccCCC-----CCCCCcCCCCCHHHHHHHHHhCCCCCC-CeEEEecccccCCCChHHHHHHHHHhHhhCCC
Q psy18110 43 SFQILKTKYEQGLFS-----SPLVPGDIHGQYYDLLRLFEYGGFPPI-SNYLFLGDYVDRGKQSLETICLLLAYKIKYPE 116 (249)
Q Consensus 43 ~f~if~~~~~~~~~~-----~~~~igDiHG~~~~l~~ll~~~~~~~~-~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~ 116 (249)
.-.+|+.++...... +.+|||||||++++|.++|+..++++. +++||||||||||++|+||+.+|.++|+.+|+
T Consensus 32 a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~ 111 (321)
T cd07420 32 ARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPN 111 (321)
T ss_pred HHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCC
Confidence 335566555432222 456889999999999999999998754 67999999999999999999999999999999
Q ss_pred cEEEEcCCccccchhhhcCcHHHHHHHhc---HHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCC
Q psy18110 117 NFFLLRGNHECASINRIYGFYDECKRRFN---IKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPT 193 (249)
Q Consensus 117 ~~~~l~GNHE~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~ 193 (249)
++++||||||.+.++..+||..++..+|+ .++|..+.++|+.||++++++++++||||||+| ..++++++.+.|+.
T Consensus 112 ~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~ 190 (321)
T cd07420 112 EVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHK 190 (321)
T ss_pred cEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccc
Confidence 99999999999999999999999999997 789999999999999999999999999999997 56888888887742
Q ss_pred C-----CCC----------------------cchhhHHHhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEe
Q psy18110 194 D-----VPD----------------------QGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICR 246 (249)
Q Consensus 194 ~-----~~~----------------------~~~~~dllW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir 246 (249)
. .+. .+.+.|+|||||......|.+++||.|+.||++++++||++|++++|||
T Consensus 191 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR 270 (321)
T cd07420 191 YVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIR 270 (321)
T ss_pred cccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEE
Confidence 1 111 1457899999999776668888999999999999999999999999999
Q ss_pred cCC
Q psy18110 247 AHQ 249 (249)
Q Consensus 247 gHe 249 (249)
|||
T Consensus 271 ~He 273 (321)
T cd07420 271 SHE 273 (321)
T ss_pred cCh
Confidence 998
No 6
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=7.8e-52 Score=358.65 Aligned_cols=207 Identities=86% Similarity=1.465 Sum_probs=192.8
Q ss_pred hhhhhhhhhcccCCC-CCCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEE
Q psy18110 43 SFQILKTKYEQGLFS-SPLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 121 (249)
Q Consensus 43 ~f~if~~~~~~~~~~-~~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l 121 (249)
...+|+.++.-.... ..+||||||||+.+|.++++..++++.+++||||||||||++|+|++.++.++|..+|.++++|
T Consensus 35 ~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~ll 114 (293)
T cd07414 35 SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 114 (293)
T ss_pred HHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEE
Confidence 335666655443333 4457799999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccchhhhcCcHHHHHHHhcHHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchh
Q psy18110 122 RGNHECASINRIYGFYDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLL 201 (249)
Q Consensus 122 ~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~ 201 (249)
|||||.+.++..++|..++..+|+..+|..+.++|++||++++++++++|||||++|.+.++++++.+.||.+.+..+.+
T Consensus 115 rGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~ 194 (293)
T cd07414 115 RGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLL 194 (293)
T ss_pred ecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCcEEEEccCCCcccCcHHHHhcccCCCCCCchhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 202 CDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 202 ~dllW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
.|+|||||.....+|.+++||.|+.||++++++||++||+++||||||
T Consensus 195 ~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He 242 (293)
T cd07414 195 CDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAHQ 242 (293)
T ss_pred hhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECCc
Confidence 999999999888899999999999999999999999999999999998
No 7
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=2e-51 Score=353.36 Aligned_cols=205 Identities=53% Similarity=0.981 Sum_probs=191.4
Q ss_pred hhhhhhhcccCC-CCCCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcC
Q psy18110 45 QILKTKYEQGLF-SSPLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 123 (249)
Q Consensus 45 ~if~~~~~~~~~-~~~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~G 123 (249)
.+++.++..... .+.+||||||||+++|.++|+..+.++.+++||||||||||++|.|++.+++++|..+|.++++|||
T Consensus 15 ~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~lk~~~p~~v~llrG 94 (271)
T smart00156 15 EIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFALKILYPNRVVLLRG 94 (271)
T ss_pred HHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHHHHhcCCCCEEEEec
Confidence 456655543333 3456789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccchhhhcCcHHHHHHHhcHHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchhhH
Q psy18110 124 NHECASINRIYGFYDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCD 203 (249)
Q Consensus 124 NHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~~d 203 (249)
|||.+.++..++|..++..+++.++++.+.++|+.||++++++++++|||||++|.+.++++++.+.||.+.+..+.+.|
T Consensus 95 NHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~d 174 (271)
T smart00156 95 NHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKLKRPQEPPDEGLLID 174 (271)
T ss_pred cccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcccCCCCCCchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred HHhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 204 LLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 204 llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
+|||||.....+|.+++||.|+.||++++++||++||+++||||||
T Consensus 175 llWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He 220 (271)
T smart00156 175 LLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQ 220 (271)
T ss_pred eeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCc
Confidence 9999998888899999999999999999999999999999999998
No 8
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.8e-51 Score=355.14 Aligned_cols=206 Identities=54% Similarity=1.031 Sum_probs=189.6
Q ss_pred hhhhhhhhhcccCCCCC-CCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEE
Q psy18110 43 SFQILKTKYEQGLFSSP-LVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 121 (249)
Q Consensus 43 ~f~if~~~~~~~~~~~~-~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l 121 (249)
...+++.++.-.....+ +|||||||++.+|.++|+..++++.+++||||||||||++|.|++.++.++|..+|.++++|
T Consensus 27 ~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~ll 106 (285)
T cd07415 27 AKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLL 106 (285)
T ss_pred HHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEE
Confidence 33556655544334444 56799999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccchhhhcCcHHHHHHHhcH-HHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcch
Q psy18110 122 RGNHECASINRIYGFYDECKRRFNI-KLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL 200 (249)
Q Consensus 122 ~GNHE~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~ 200 (249)
|||||...++..++|..++..+|+. .+|..+.++|+.||++++++++++||||||+|...++++++.+.||.+.+..+.
T Consensus 107 rGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~ 186 (285)
T cd07415 107 RGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGP 186 (285)
T ss_pred ecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCCCCCCcccHHHhhcccCCCCCCCCCC
Confidence 9999999999999999999999974 899999999999999999999999999999999999999999999999888899
Q ss_pred hhHHHhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 201 LCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 201 ~~dllW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
..|+|||||... .+|.+++||.|+.||++++++||++||+++||||||
T Consensus 187 ~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He 234 (285)
T cd07415 187 MCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQ 234 (285)
T ss_pred ccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCc
Confidence 999999999974 789999999999999999999999999999999998
No 9
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=3.2e-51 Score=355.48 Aligned_cols=205 Identities=47% Similarity=0.948 Sum_probs=188.6
Q ss_pred hhhhhhhhcccCCCCC-CCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEc
Q psy18110 44 FQILKTKYEQGLFSSP-LVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122 (249)
Q Consensus 44 f~if~~~~~~~~~~~~-~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~ 122 (249)
..+++.++.-.....+ +|+|||||++.+|.++++..+.++.+++||||||||||++|.|++.++.++|..+|.++++||
T Consensus 29 ~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llr 108 (303)
T PTZ00239 29 KEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLR 108 (303)
T ss_pred HHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEe
Confidence 3456655544334444 567999999999999999999888999999999999999999999999999999999999999
Q ss_pred CCccccchhhhcCcHHHHHHHhcH-HHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchh
Q psy18110 123 GNHECASINRIYGFYDECKRRFNI-KLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLL 201 (249)
Q Consensus 123 GNHE~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~ 201 (249)
||||.+.++..++|..++..+|+. ..|..+.++|+.||++++++++++|||||++|.+.++++++.+.||.+.+..+..
T Consensus 109 GNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~ 188 (303)
T PTZ00239 109 GNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPF 188 (303)
T ss_pred cccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcCccCcccccHhhhccccCCCCCCCCCCc
Confidence 999999999999999999999964 7899999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 202 CDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 202 ~dllW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
.|+|||||.. ..+|.+++||.|+.||++++++||++||+++||||||
T Consensus 189 ~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He 235 (303)
T PTZ00239 189 CDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQ 235 (303)
T ss_pred eeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcCh
Confidence 9999999985 5689999999999999999999999999999999998
No 10
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=8.1e-51 Score=354.39 Aligned_cols=207 Identities=44% Similarity=0.850 Sum_probs=188.1
Q ss_pred hhhhhhhhhcccCCCC-CCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEE
Q psy18110 43 SFQILKTKYEQGLFSS-PLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 121 (249)
Q Consensus 43 ~f~if~~~~~~~~~~~-~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l 121 (249)
.-.+++.++....... .+||||||||+.+|.++|+..+.++.+++||||||||||++|.|++.+++++|..+|.++++|
T Consensus 28 ~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lL 107 (305)
T cd07416 28 GAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLL 107 (305)
T ss_pred HHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEE
Confidence 3355666555444444 457799999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccchhhhcCcHHHHHHHhcHHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchh
Q psy18110 122 RGNHECASINRIYGFYDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLL 201 (249)
Q Consensus 122 ~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~ 201 (249)
|||||.+.++..++|..++..+++..++..+.++|++||++++++++++|||||++|.+.++++++.+.|+.+.+..+.+
T Consensus 108 RGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~ 187 (305)
T cd07416 108 RGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDRFREPPAFGPM 187 (305)
T ss_pred eCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCCEEEEcCCCCcccccHHHhcccCCCCCCCCCCcc
Confidence 99999998998999999999999999999999999999999999999999999999999999999999999988888999
Q ss_pred hHHHhcCCCCCCC------CCccC-CCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 202 CDLLWSDPDKDTM------GWGEN-DRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 202 ~dllW~dp~~~~~------~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
.|+|||||..... +|.++ +||.|+.||++++++||++||+++||||||
T Consensus 188 ~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He 242 (305)
T cd07416 188 CDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHE 242 (305)
T ss_pred eeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEecc
Confidence 9999999986433 47654 899999999999999999999999999998
No 11
>KOG0373|consensus
Probab=100.00 E-value=3.4e-51 Score=329.29 Aligned_cols=201 Identities=49% Similarity=0.988 Sum_probs=189.8
Q ss_pred hhhhcccCCCCCC-CCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCcc
Q psy18110 48 KTKYEQGLFSSPL-VPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 126 (249)
Q Consensus 48 ~~~~~~~~~~~~~-~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE 126 (249)
-.+...+....|+ |.|||||++.+|..+++..|--|+..+||+|||||||..|+|++.+++.||.++|.++.+||||||
T Consensus 36 ~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHE 115 (306)
T KOG0373|consen 36 MEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHE 115 (306)
T ss_pred hhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccch
Confidence 3344445555666 559999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhcCcHHHHHHHhc-HHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchhhHHH
Q psy18110 127 CASINRIYGFYDECKRRFN-IKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205 (249)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~~dll 205 (249)
.+.+...|||++||..+|+ ...|+.+.+.|+.|+++++|+++++|||||++|++.++++|+-+.|..+.|..+..+|++
T Consensus 116 sRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlm 195 (306)
T KOG0373|consen 116 SRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLM 195 (306)
T ss_pred hhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCcccee
Confidence 9999999999999999995 689999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 206 WSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 206 W~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
||||.. ...|.-++||+|.+||.+++++|..-|++++|+|+||
T Consensus 196 WSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQ 238 (306)
T KOG0373|consen 196 WSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQ 238 (306)
T ss_pred ccChhh-hhhheeCCCCcceeechhhhHHHHhccchHHHHhHHH
Confidence 999985 8899999999999999999999999999999999997
No 12
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=4.3e-50 Score=350.59 Aligned_cols=191 Identities=45% Similarity=0.882 Sum_probs=179.6
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCCCC-CeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhhcCc
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFPPI-SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 136 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~~~-~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~~~ 136 (249)
+.+||||||||+.+|.++|+..++++. +++||||||||||++|+||+.+++++|..+|.++++||||||.+.++..++|
T Consensus 61 ~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf 140 (316)
T cd07417 61 KITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGF 140 (316)
T ss_pred eeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhh
Confidence 357899999999999999999998755 4699999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcHHHHHHHhHHhhcCcceEEecCeEEEecCCC-CCCcCCHHHHhhhcCCCCCCCcchhhHHHhcCCCCCCCC
Q psy18110 137 YDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMG 215 (249)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi-~p~~~~~~~i~~~~~~~~~~~~~~~~dllW~dp~~~~~~ 215 (249)
..++..+++..++..+.++|+.||++++++++++|||||+ +|...++++++++.|+.+.+..+...|+|||||.+. .+
T Consensus 141 ~~e~~~k~~~~l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~ 219 (316)
T cd07417 141 EGEVKAKYNEQMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PG 219 (316)
T ss_pred cchhhhcccHHHHHHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CC
Confidence 9999999999999999999999999999999999999999 567889999999999988888899999999999864 58
Q ss_pred CccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 216 WGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 216 ~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
|.+++||.|+.||++++++||++||+++||||||
T Consensus 220 ~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He 253 (316)
T cd07417 220 RSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHE 253 (316)
T ss_pred CCccCCCCceEeCHHHHHHHHHHcCCcEEEECCc
Confidence 9999999999999999999999999999999998
No 13
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=4.8e-49 Score=348.27 Aligned_cols=207 Identities=36% Similarity=0.707 Sum_probs=178.3
Q ss_pred hhhhhhhhhhcccCC-----CCCCCCcCCCCCHHHHHHHHHhCCCCCC-CeEEEecccccCCCChHHHHHHHHHhHhhCC
Q psy18110 42 CSFQILKTKYEQGLF-----SSPLVPGDIHGQYYDLLRLFEYGGFPPI-SNYLFLGDYVDRGKQSLETICLLLAYKIKYP 115 (249)
Q Consensus 42 ~~f~if~~~~~~~~~-----~~~~~igDiHG~~~~l~~ll~~~~~~~~-~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~ 115 (249)
..-.+++.++..... .+.+|||||||++.+|.++|+..++++. +.+||||||||||++|+||+.++..++..+|
T Consensus 46 ~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p 125 (377)
T cd07418 46 TAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLP 125 (377)
T ss_pred HHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccC
Confidence 333566665543322 3456789999999999999999998765 4599999999999999999999999999999
Q ss_pred CcEEEEcCCccccchhhhcCcHHHHHHHhcH---HHHHHHhHHhhcCcceEEecCeEEEecCCCC---------------
Q psy18110 116 ENFFLLRGNHECASINRIYGFYDECKRRFNI---KLWKTFTECFNCLPVAAIVDEKIFCCHGGLS--------------- 177 (249)
Q Consensus 116 ~~~~~l~GNHE~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~--------------- 177 (249)
.++++||||||.+.++..++|..++..+|+. .+++.+.++|++||++++++++++||||||+
T Consensus 126 ~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~ 205 (377)
T cd07418 126 DRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKN 205 (377)
T ss_pred CeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccc
Confidence 9999999999999999999999999999864 6899999999999999999989999999993
Q ss_pred ------------CCcCCHHHHhhhcCCC-CCCCcc---hhhHHHhcCCCCCCCCCcc-CCCCceeecCHHHHHHHHHHCC
Q psy18110 178 ------------PDLQSMEQIRRIMRPT-DVPDQG---LLCDLLWSDPDKDTMGWGE-NDRGVSFTFGAEVVAKFLHKHD 240 (249)
Q Consensus 178 ------------p~~~~~~~i~~~~~~~-~~~~~~---~~~dllW~dp~~~~~~~~~-~~rg~~~~fg~~~~~~fl~~~~ 240 (249)
|.+.++++|+.++|+. +.+..+ ++.|+|||||... .+|.+ +.||.|+.||++++++||++|+
T Consensus 206 ~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dlLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~ 284 (377)
T cd07418 206 RRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNN 284 (377)
T ss_pred cccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceeeEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcC
Confidence 4567899999999974 555443 4689999999975 45544 5799999999999999999999
Q ss_pred CcEEEecCC
Q psy18110 241 FDLICRAHQ 249 (249)
Q Consensus 241 ~~~iirgHe 249 (249)
+++||||||
T Consensus 285 l~~IIRsHe 293 (377)
T cd07418 285 LKLIIRSHE 293 (377)
T ss_pred CcEEEECCC
Confidence 999999998
No 14
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=4.2e-48 Score=338.61 Aligned_cols=208 Identities=44% Similarity=0.824 Sum_probs=181.7
Q ss_pred hhhhhhhhhhcccCCCC-CCCCcCCCCCHHHHHHHHHhCCCCCC--------CeEEEecccccCCCChHHHHHHHHHhHh
Q psy18110 42 CSFQILKTKYEQGLFSS-PLVPGDIHGQYYDLLRLFEYGGFPPI--------SNYLFLGDYVDRGKQSLETICLLLAYKI 112 (249)
Q Consensus 42 ~~f~if~~~~~~~~~~~-~~~igDiHG~~~~l~~ll~~~~~~~~--------~~~vflGD~vdrG~~s~~~l~~l~~l~~ 112 (249)
....+++.++.-..... .+||||||||+++|.++|+..++++. .++||||||||||++|+||+.++++++.
T Consensus 32 ~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~ 111 (311)
T cd07419 32 AAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKV 111 (311)
T ss_pred HHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChHHHHHHHHHhhh
Confidence 33456666554433333 45789999999999999999988754 4799999999999999999999999999
Q ss_pred hCCCcEEEEcCCccccchhhhcCcHHHHHHHhcH------HHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHH
Q psy18110 113 KYPENFFLLRGNHECASINRIYGFYDECKRRFNI------KLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQI 186 (249)
Q Consensus 113 ~~~~~~~~l~GNHE~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i 186 (249)
.+|.++++||||||.+.++..++|..++..+++. ..+..+.++|+.||++++++++++|||||++|.+.+++++
T Consensus 112 ~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i 191 (311)
T cd07419 112 KYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMHGGIGRSINHVSEI 191 (311)
T ss_pred cCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEccCCCCCCCcHHHH
Confidence 9999999999999999999999999888888764 5889999999999999999989999999999999999999
Q ss_pred hhhcCCC-CCCCcchhhHHHhcCCCCC--CCCCccCC---CCce--eecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 187 RRIMRPT-DVPDQGLLCDLLWSDPDKD--TMGWGEND---RGVS--FTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 187 ~~~~~~~-~~~~~~~~~dllW~dp~~~--~~~~~~~~---rg~~--~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
+.+.||. ..+..+.+.|++||||... ..+|.+++ ||.| +.||++++++||++||+++||||||
T Consensus 192 ~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 192 EDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred hhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEEEech
Confidence 9999997 4456678899999999964 34666665 9988 7999999999999999999999998
No 15
>KOG0375|consensus
Probab=100.00 E-value=9.8e-49 Score=334.29 Aligned_cols=204 Identities=42% Similarity=0.867 Sum_probs=190.4
Q ss_pred hhhhhhcccCCCCCCCC-cCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCC
Q psy18110 46 ILKTKYEQGLFSSPLVP-GDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN 124 (249)
Q Consensus 46 if~~~~~~~~~~~~~~i-gDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GN 124 (249)
+++.++.....+.|+.| |||||++.+|+++++..|-|..++++|||||||||..|+||+.+|.+||+.+|..+++||||
T Consensus 76 llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGN 155 (517)
T KOG0375|consen 76 LLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWSLKINYPKTLFLLRGN 155 (517)
T ss_pred HHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHHHHhcCCCCeEEEecCC
Confidence 45555556666788855 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhcCcHHHHHHHhcHHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchhhHH
Q psy18110 125 HECASINRIYGFYDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDL 204 (249)
Q Consensus 125 HE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~~dl 204 (249)
||.+.+...+.|..||.-+|+.++++.+.+-|+.||+++..++.++|||||++|++.++++|+++.|..++|..+..+|+
T Consensus 156 HECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~l~RF~EpPa~GpmCDL 235 (517)
T KOG0375|consen 156 HECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRKLDRFKEPPAFGPMCDL 235 (517)
T ss_pred cchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHhhhhccCCCccCcchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCC------CCc-cCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 205 LWSDPDKDTM------GWG-ENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 205 lW~dp~~~~~------~~~-~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
|||||.++.. .|. ++.||+++.|...|+++||+.||+-.|||+||
T Consensus 236 LWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHE 287 (517)
T KOG0375|consen 236 LWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHE 287 (517)
T ss_pred hccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhh
Confidence 9999998532 343 35799999999999999999999999999997
No 16
>KOG0371|consensus
Probab=100.00 E-value=4.4e-46 Score=305.79 Aligned_cols=203 Identities=50% Similarity=1.023 Sum_probs=190.1
Q ss_pred hhhhhhcccCCCCCCC-CcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCC
Q psy18110 46 ILKTKYEQGLFSSPLV-PGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN 124 (249)
Q Consensus 46 if~~~~~~~~~~~~~~-igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GN 124 (249)
+++.+.+-+....|++ +||+||++++|..+++..|..++..++|+|||||||++|.|++.++.++|++||++|.+||||
T Consensus 48 ~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGN 127 (319)
T KOG0371|consen 48 ILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGN 127 (319)
T ss_pred HHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCc
Confidence 4444445555666665 499999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhcCcHHHHHHHh-cHHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchhhH
Q psy18110 125 HECASINRIYGFYDECKRRF-NIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCD 203 (249)
Q Consensus 125 HE~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~~d 203 (249)
||.+.+...++|+++|.+++ ....|+.+...|+.+|+.+.|+++++|.|||++|++..++.++.+.|..++|.++..+|
T Consensus 128 HEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcD 207 (319)
T KOG0371|consen 128 HESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCD 207 (319)
T ss_pred hHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhh
Confidence 99999999999999999999 57899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 204 LLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 204 llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
+|||||.. ..+|..++||.++.||++..++|-.+||+++|-|+||
T Consensus 208 lLwsdpdd-r~gwg~sprgag~tfg~di~~~fn~~n~lslisRahq 252 (319)
T KOG0371|consen 208 LLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQ 252 (319)
T ss_pred eeccCccc-CCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHH
Confidence 99999984 6799999999999999999999999999999999996
No 17
>KOG0377|consensus
Probab=100.00 E-value=6.9e-38 Score=273.57 Aligned_cols=191 Identities=35% Similarity=0.665 Sum_probs=167.0
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCCCCCe-EEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhhcCc
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFPPISN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 136 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~~~~~-~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~~~ 136 (249)
++.|.||+||.+++|.-+|-+.|+|..+. |||.||+||||.+|+|+|..|.++...+|..+++-|||||+.+++..|||
T Consensus 166 qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF 245 (631)
T KOG0377|consen 166 QVTICGDLHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGF 245 (631)
T ss_pred ceEEeccccccccceEEEEecCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhH
Confidence 45577999999999999999999997765 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh---cHHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCC-----CCCC-----------
Q psy18110 137 YDECKRRF---NIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPT-----DVPD----------- 197 (249)
Q Consensus 137 ~~~~~~~~---~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~-----~~~~----------- 197 (249)
..|+..+| +.+...-+.++++.||++.+++.++++||||++. ...++-+.++.|.. .+|.
T Consensus 246 ~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd-~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~ 324 (631)
T KOG0377|consen 246 IKEVESKYKRHGKRILRFLEEVYRWLPIGTIIDSRILVVHGGISD-STDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSK 324 (631)
T ss_pred HHHHHHHhhhcccHHHHHHHHHHHhcchhhhcccceEEEecCccc-chhHHHHhhhhccceeEEecCCcccCccCCchhh
Confidence 99999988 4577888999999999999999999999999975 33444444443321 1111
Q ss_pred ------cchhhHHHhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 198 ------QGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 198 ------~~~~~dllW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
=..+.|+|||||.....+|++..||.|.+||+|++..||++++++++||+||
T Consensus 325 ~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHE 382 (631)
T KOG0377|consen 325 AVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHE 382 (631)
T ss_pred hcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeecc
Confidence 0245699999999999999999999999999999999999999999999998
No 18
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=3e-33 Score=234.72 Aligned_cols=179 Identities=51% Similarity=0.887 Sum_probs=148.7
Q ss_pred CCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhhcCcHHH
Q psy18110 60 LVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDE 139 (249)
Q Consensus 60 ~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~~~~~~ 139 (249)
++||||||++++|.++++.++..+.+.+|||||+||||+++.++++++.+++.. |.++++|+||||.+.+....++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 579999999999999999999888899999999999999999999999998766 7899999999999988766554432
Q ss_pred H---------HHHhcHHHHHHHhHHhhcCcceEEecC-eEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchhhHHHhcCC
Q psy18110 140 C---------KRRFNIKLWKTFTECFNCLPVAAIVDE-KIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDP 209 (249)
Q Consensus 140 ~---------~~~~~~~~~~~~~~~l~~lP~~~~i~~-~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~~dllW~dp 209 (249)
. ...........+..++..||+++.++. +++|||||++|......+.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 1 223345677889999999999999987 99999999999876665544 2334456678999999
Q ss_pred CCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 210 DKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 210 ~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
.........+.++. |+++++.|++.++.++|||||+
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt 189 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHT 189 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCc
Confidence 86555444455544 9999999999999999999996
No 19
>KOG0376|consensus
Probab=100.00 E-value=7.8e-34 Score=252.56 Aligned_cols=191 Identities=46% Similarity=0.901 Sum_probs=179.8
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCCCCC-eEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhhcCc
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFPPIS-NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 136 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~~~~-~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~~~ 136 (249)
...+.||+||++.++.++++..+.++.. .++|.||++|||..|.|+...+...+..+|++++++|||||...++..++|
T Consensus 215 ~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f 294 (476)
T KOG0376|consen 215 KISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGF 294 (476)
T ss_pred eEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCC
Confidence 3446699999999999999999988765 599999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcHHHHHHHhHHhhcCcceEEecCeEEEecCCCC-CCcCCHHHHhhhcCCCCCCCcchhhHHHhcCCCCCCCC
Q psy18110 137 YDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLS-PDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMG 215 (249)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~-p~~~~~~~i~~~~~~~~~~~~~~~~dllW~dp~~~~~~ 215 (249)
..++..+|.++....+.+.|..||++..++++++.+|||+. |.-..+++++++.|+..+++.+..++++||||++ .++
T Consensus 295 ~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~-~~g 373 (476)
T KOG0376|consen 295 EGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQP-ANG 373 (476)
T ss_pred CcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCcc-ccC
Confidence 99999999999998888999999999999999999999984 5667899999999999999999999999999997 478
Q ss_pred CccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 216 WGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 216 ~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
.+++.||.|..||++++++||+.+++++||||||
T Consensus 374 ~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe 407 (476)
T KOG0376|consen 374 RSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHE 407 (476)
T ss_pred CCccccCceeeeCCCchhhHHhhcchHHHhhccc
Confidence 9999999999999999999999999999999997
No 20
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.96 E-value=1.5e-29 Score=216.03 Aligned_cols=163 Identities=20% Similarity=0.249 Sum_probs=126.7
Q ss_pred CCCCCCcCCCCCHHHHHHHHHhCCCC-CCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhhcC
Q psy18110 57 SSPLVPGDIHGQYYDLLRLFEYGGFP-PISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 135 (249)
Q Consensus 57 ~~~~~igDiHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~~ 135 (249)
++.++|||||||+++|+++|+++++. ..+.+||+||+|||||+|++|++++.++. .++++|+||||.+++....+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 35789999999999999999999976 46789999999999999999999998874 46889999999999887665
Q ss_pred c-----HHHHHHHhcHHHHHHHhHHhhcCcceEEec-CeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchhhHHHhcCC
Q psy18110 136 F-----YDECKRRFNIKLWKTFTECFNCLPVAAIVD-EKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDP 209 (249)
Q Consensus 136 ~-----~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~-~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~~dllW~dp 209 (249)
+ .+...+.+.....+++.+|++++|+....+ .++++||||++|.+..-.......+...........+++.+..
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l~~a~~~a~eve~~L~~~~~~~fl~~my 156 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMY 156 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcHHHHHHHHHHHHHHHcCCCHHHHHHHhh
Confidence 4 233334445567789999999999997654 3699999999998864443333333333333334456888888
Q ss_pred CCCCCCCccCCCCc
Q psy18110 210 DKDTMGWGENDRGV 223 (249)
Q Consensus 210 ~~~~~~~~~~~rg~ 223 (249)
.+.+..|.++.+|.
T Consensus 157 gn~p~~W~~~l~g~ 170 (279)
T TIGR00668 157 GDMPNRWSPELQGL 170 (279)
T ss_pred CCCCccCCCCCchH
Confidence 88788899887775
No 21
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.96 E-value=1.3e-28 Score=209.77 Aligned_cols=161 Identities=21% Similarity=0.309 Sum_probs=115.1
Q ss_pred CCCCcCCCCCHHHHHHHHHhCCCC-CCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhhcCcH
Q psy18110 59 PLVPGDIHGQYYDLLRLFEYGGFP-PISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 137 (249)
Q Consensus 59 ~~~igDiHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~~~~ 137 (249)
+++|||||||+++|+++|+++++. +.+.+||+||+|||||+|.+|++++++++ .++++|+||||.+++...++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 378999999999999999999886 56889999999999999999999999885 4799999999999887654432
Q ss_pred -----HHHHHHhcHHHHHHHhHHhhcCcceEEecC-eEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchhhHHHhcCCCC
Q psy18110 138 -----DECKRRFNIKLWKTFTECFNCLPVAAIVDE-KIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 211 (249)
Q Consensus 138 -----~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~-~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~~dllW~dp~~ 211 (249)
+...+.+.....+++.+||+++|+...+++ ++++||||++|.+...+......+...........+++.+...+
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~~~~~~~a~eve~~l~~~~~~~~~~~my~~ 156 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSIEQALKLAREVEAALRGPNYREFLKNMYGN 156 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhhCC
Confidence 222222334455789999999999998875 79999999999875433222222211111122223344444444
Q ss_pred CCCCCccCCCCc
Q psy18110 212 DTMGWGENDRGV 223 (249)
Q Consensus 212 ~~~~~~~~~rg~ 223 (249)
.+..|..+..|.
T Consensus 157 ~p~~W~~~l~g~ 168 (257)
T cd07422 157 EPDRWSDDLTGI 168 (257)
T ss_pred CCcccCcccCcc
Confidence 444677666554
No 22
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.95 E-value=4.6e-28 Score=208.46 Aligned_cols=124 Identities=22% Similarity=0.353 Sum_probs=99.9
Q ss_pred CCCCCCcCCCCCHHHHHHHHHhCCCC-CCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhhcC
Q psy18110 57 SSPLVPGDIHGQYYDLLRLFEYGGFP-PISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 135 (249)
Q Consensus 57 ~~~~~igDiHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~~ 135 (249)
|+.++|||||||+++|+++|+++++. ..+.+|||||+|||||+|.+|+++++++ +.++++|+||||.+++...++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 45789999999999999999999874 5678999999999999999999999887 347999999999988776554
Q ss_pred cH-----HHHHHHhcHHHHHHHhHHhhcCcceEEe-cCeEEEecCCCCCCcCCHH
Q psy18110 136 FY-----DECKRRFNIKLWKTFTECFNCLPVAAIV-DEKIFCCHGGLSPDLQSME 184 (249)
Q Consensus 136 ~~-----~~~~~~~~~~~~~~~~~~l~~lP~~~~i-~~~~l~vHgGi~p~~~~~~ 184 (249)
.. +.+.+.......+++.+|++++|+...+ ++++++||||++|.+...+
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~ 131 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLAT 131 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHH
Confidence 32 1222222334557789999999999886 5589999999999875443
No 23
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.95 E-value=1.4e-27 Score=203.26 Aligned_cols=121 Identities=24% Similarity=0.396 Sum_probs=96.1
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCC---------CCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFP---------PISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~---------~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
+.+||||||||+++|+++|+++++. ..+++|||||||||||+|.+|+++++++. .+.++++|+||||.+
T Consensus 2 ~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 2 KYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCNK 79 (245)
T ss_pred ceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHHH
Confidence 4578999999999999999998874 45789999999999999999999998885 456899999999998
Q ss_pred chhhhcCc-------HHHHHHHh-------cHHHHHHHhHHhhcCcceEEec-CeEEEecCCCCCCc
Q psy18110 129 SINRIYGF-------YDECKRRF-------NIKLWKTFTECFNCLPVAAIVD-EKIFCCHGGLSPDL 180 (249)
Q Consensus 129 ~~~~~~~~-------~~~~~~~~-------~~~~~~~~~~~l~~lP~~~~i~-~~~l~vHgGi~p~~ 180 (249)
+++...+- ..+..+.+ ...+.+.+.+|++++|++..++ ++++|||||+.|..
T Consensus 80 ~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 80 LYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 87654321 11222222 1235678899999999998774 57999999998853
No 24
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.94 E-value=2.2e-26 Score=193.14 Aligned_cols=115 Identities=25% Similarity=0.349 Sum_probs=92.1
Q ss_pred CCCcCCCCCHHHHHHHHHhCCCC--------CCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchh
Q psy18110 60 LVPGDIHGQYYDLLRLFEYGGFP--------PISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASIN 131 (249)
Q Consensus 60 ~~igDiHG~~~~l~~ll~~~~~~--------~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~ 131 (249)
+||||||||+++|+++|+++++. +.+.+|||||||||||+|.+|+++++++.. +.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 58999999999999999998875 467899999999999999999999999853 45899999999998875
Q ss_pred hhcCc------H-----------HHHHHHh--cHHHHHHHhHHhhcCcceEEecCeEEEecCCCC
Q psy18110 132 RIYGF------Y-----------DECKRRF--NIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLS 177 (249)
Q Consensus 132 ~~~~~------~-----------~~~~~~~--~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~ 177 (249)
...+. . ....+.+ ..+..+.+.+||++||+....+ +++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~~-~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDLG-GVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEEC-CEEEEECCcC
Confidence 43221 0 1122222 1345678999999999998875 8999999985
No 25
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.94 E-value=6e-26 Score=188.58 Aligned_cols=155 Identities=21% Similarity=0.292 Sum_probs=112.2
Q ss_pred CCCcCCCCCHHHHHHHHHhCCC--------CCCCeEEEecccccCCCChHHHHHHHHHhHhh---CCCcEEEEcCCcccc
Q psy18110 60 LVPGDIHGQYYDLLRLFEYGGF--------PPISNYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFFLLRGNHECA 128 (249)
Q Consensus 60 ~~igDiHG~~~~l~~ll~~~~~--------~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~---~~~~~~~l~GNHE~~ 128 (249)
++|||||||+++|+++|+.+++ .+.+.+|++||+||||+++.++++++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35678999999999999999999999998754 456899999999999
Q ss_pred chhhhcCcH--HHHHHHhc-----H---HHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCc
Q psy18110 129 SINRIYGFY--DECKRRFN-----I---KLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQ 198 (249)
Q Consensus 129 ~~~~~~~~~--~~~~~~~~-----~---~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~ 198 (249)
.+...+.+. ........ . .....+.+||+++|+...++ +++|||||++
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~--------------------- 138 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLG--------------------- 138 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcH---------------------
Confidence 886443221 11111000 0 12245689999999999887 7999999982
Q ss_pred chhhHHHhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 199 GLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 199 ~~~~dllW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
.+|+..-....... + =+...++++++.++.+.||+||.
T Consensus 139 -----~~w~r~y~~~~~~~---~-----~~~~~~~~~l~~~~~~~iv~GHT 176 (208)
T cd07425 139 -----PLWYRGYSKETSDK---E-----CAAAHLDKVLERLGAKRMVVGHT 176 (208)
T ss_pred -----HHHhhHhhhhhhhc---c-----chHHHHHHHHHHcCCCeEEEcCe
Confidence 23432110000000 0 01256889999999999999994
No 26
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.92 E-value=4.8e-25 Score=186.50 Aligned_cols=121 Identities=26% Similarity=0.448 Sum_probs=95.8
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCCC----------CCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccc
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFPP----------ISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 127 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~~----------~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~ 127 (249)
+..||||||||+++|+++|+++++.+ .+++|||||||||||+|.+|++++++++. +.++++|+||||.
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE~ 79 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHDN 79 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcHH
Confidence 45689999999999999999997753 46899999999999999999999998864 3579999999999
Q ss_pred cchhhhcCcH-------HHHHHHh---cHHHHHHHhHHhhcCcceEEec-CeEEEecCCCCCCc
Q psy18110 128 ASINRIYGFY-------DECKRRF---NIKLWKTFTECFNCLPVAAIVD-EKIFCCHGGLSPDL 180 (249)
Q Consensus 128 ~~~~~~~~~~-------~~~~~~~---~~~~~~~~~~~l~~lP~~~~i~-~~~l~vHgGi~p~~ 180 (249)
++++...+.. .++...+ ..+..++..+||++||+...++ ++++|||||+++..
T Consensus 80 ~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 80 KLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 8876543210 1222222 2456678899999999998775 47999999987643
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.92 E-value=3.5e-25 Score=185.41 Aligned_cols=116 Identities=28% Similarity=0.308 Sum_probs=90.1
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHhCCCC-CCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhhc
Q psy18110 56 FSSPLVPGDIHGQYYDLLRLFEYGGFP-PISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIY 134 (249)
Q Consensus 56 ~~~~~~igDiHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~ 134 (249)
..+.+||||||||+++|+++|+.+++. ..+++|||||+|||||+|.+|++++.+. ++++|+||||.++++...
T Consensus 16 ~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~ 89 (218)
T PRK11439 16 WRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALA 89 (218)
T ss_pred CCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHH
Confidence 346789999999999999999999886 5678999999999999999999999652 688999999999886542
Q ss_pred CcHH--------HHHHHh---cHHHHHHHhHHhhcCcceEEec---CeEEEecCCCC
Q psy18110 135 GFYD--------ECKRRF---NIKLWKTFTECFNCLPVAAIVD---EKIFCCHGGLS 177 (249)
Q Consensus 135 ~~~~--------~~~~~~---~~~~~~~~~~~l~~lP~~~~i~---~~~l~vHgGi~ 177 (249)
+... +....+ ..+....+.+|+++||+...+. +++++||||++
T Consensus 90 ~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 90 SQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 2110 000111 1234567779999999997753 46999999973
No 28
>PHA02239 putative protein phosphatase
Probab=99.91 E-value=3.3e-24 Score=180.91 Aligned_cols=154 Identities=25% Similarity=0.324 Sum_probs=109.2
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCC--CCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhhcC
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFP--PISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 135 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~--~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~~ 135 (249)
+.++||||||++++|+++++.+... +.+.+||+|||||||++|.++++.++++.. .+.++++|+||||.+++....+
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~~ 80 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIMEN 80 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHhC
Confidence 4578999999999999999987543 467899999999999999999999988753 4568999999999987654321
Q ss_pred cH--------------HHHHHHhc-------------------------------HHHHHHHhHHhhcCcceEEecCeEE
Q psy18110 136 FY--------------DECKRRFN-------------------------------IKLWKTFTECFNCLPVAAIVDEKIF 170 (249)
Q Consensus 136 ~~--------------~~~~~~~~-------------------------------~~~~~~~~~~l~~lP~~~~i~~~~l 170 (249)
.. .++...|+ .....++..|+++||+....+ +++
T Consensus 81 ~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~-~~i 159 (235)
T PHA02239 81 VDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKED-KYI 159 (235)
T ss_pred chhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEEC-CEE
Confidence 10 11112221 012355667999999998866 899
Q ss_pred EecCCCCCCcCCHHHHhhhcCCCCCCCcchhhHHHhcCCCCCCCCCccCCCCceeecCHHHHH
Q psy18110 171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVA 233 (249)
Q Consensus 171 ~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~~dllW~dp~~~~~~~~~~~rg~~~~fg~~~~~ 233 (249)
|||||+.|..+..+ ....+++|... . .....|.-+.||+..+.
T Consensus 160 fVHAGi~p~~~~~~--------------q~~~~llWiR~-f-----~~~~~g~~vV~GHTp~~ 202 (235)
T PHA02239 160 FSHSGGVSWKPVEE--------------QTIDQLIWSRD-F-----QPRKDGFTYVCGHTPTD 202 (235)
T ss_pred EEeCCCCCCCChhh--------------CCHhHeEEecc-c-----CCCCCCcEEEECCCCCC
Confidence 99999988644222 12347999875 2 22223444667776553
No 29
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.91 E-value=3.7e-24 Score=183.16 Aligned_cols=130 Identities=24% Similarity=0.304 Sum_probs=100.2
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCC------CCCeEEEecccccCCCChHHHHHHHHHhHhhCCC-cEEEEcCCccccch
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFP------PISNYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECASI 130 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~------~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~-~~~~l~GNHE~~~~ 130 (249)
+.++||||||++++|+++|+.+... ..+.+|||||||||||+|.+|+++|.+++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 3578999999999999999875422 2456999999999999999999999999887765 68999999998776
Q ss_pred hhhcCc---------H------------------------------------------------------HHHHHHhc--
Q psy18110 131 NRIYGF---------Y------------------------------------------------------DECKRRFN-- 145 (249)
Q Consensus 131 ~~~~~~---------~------------------------------------------------------~~~~~~~~-- 145 (249)
...... . .++...|+
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 433210 0 11222232
Q ss_pred -------HHHHHHHhHHhhcCcceEEecCeE-------------EEecCCCCCCcCCHHHHhh
Q psy18110 146 -------IKLWKTFTECFNCLPVAAIVDEKI-------------FCCHGGLSPDLQSMEQIRR 188 (249)
Q Consensus 146 -------~~~~~~~~~~l~~lP~~~~i~~~~-------------l~vHgGi~p~~~~~~~i~~ 188 (249)
..+.+.+.+||+.||+....+ ++ +|||||+.|..+.-+|.+.
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~ 224 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKL 224 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhh
Confidence 134467899999999998755 55 9999999999987777765
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.89 E-value=1.9e-23 Score=173.57 Aligned_cols=116 Identities=30% Similarity=0.406 Sum_probs=90.4
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCC-CCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhhcCc
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFP-PISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 136 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~~~ 136 (249)
+.++||||||++.+|+++++.+++. ..+.++++||+||||+++.++++++.+ .++++|+||||.+++....+.
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~~ 75 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRAE 75 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhCC
Confidence 4578999999999999999998864 467899999999999999999998865 368999999999888765331
Q ss_pred --HHHHHHH---------hcHHHHHHHhHHhhcCcceEEec---CeEEEecCCCCCC
Q psy18110 137 --YDECKRR---------FNIKLWKTFTECFNCLPVAAIVD---EKIFCCHGGLSPD 179 (249)
Q Consensus 137 --~~~~~~~---------~~~~~~~~~~~~l~~lP~~~~i~---~~~l~vHgGi~p~ 179 (249)
..+.... ...+..+.+.+||++||+...++ .++++||||+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~ 132 (207)
T cd07424 76 PLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSD 132 (207)
T ss_pred CcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcc
Confidence 1111111 11224566889999999998864 3799999998654
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.88 E-value=8.8e-23 Score=170.80 Aligned_cols=114 Identities=25% Similarity=0.297 Sum_probs=86.2
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCC-CCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhhcCc
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFP-PISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 136 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~~~ 136 (249)
+.++|||||||+++|+++|+.+.+. ..+.+||+||+|||||+|.++++++.+ .++++|+||||.+++.....-
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~~ 89 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFETG 89 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhcC
Confidence 5678999999999999999998864 567899999999999999999998864 368999999999888644211
Q ss_pred HH--------HHHHHhcH---HHHHHHhHHhhcCcceEEec---CeEEEecCCCC
Q psy18110 137 YD--------ECKRRFNI---KLWKTFTECFNCLPVAAIVD---EKIFCCHGGLS 177 (249)
Q Consensus 137 ~~--------~~~~~~~~---~~~~~~~~~l~~lP~~~~i~---~~~l~vHgGi~ 177 (249)
.. +....+.. ........||++||+...+. .++++||||++
T Consensus 90 ~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 90 DGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred ChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 00 01111111 23344567999999998763 36899999983
No 32
>KOG0372|consensus
Probab=99.62 E-value=4.9e-17 Score=133.78 Aligned_cols=55 Identities=33% Similarity=0.635 Sum_probs=51.0
Q ss_pred CcccccccccCCceEEeecCCCccCCcCCcccceeecchhhhhhhhhhhhhcccC
Q psy18110 1 VVEEGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKTKYEQGL 55 (249)
Q Consensus 1 ~~~~G~~~~~~~~l~tv~sapny~~~~~N~~ail~i~~~l~~~f~if~~~~~~~~ 55 (249)
||||||+++|+.+|+|||||||||++|+|.||||++++++...|++|++.+.+..
T Consensus 236 Lv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~ 290 (303)
T KOG0372|consen 236 LVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESR 290 (303)
T ss_pred HHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhc
Confidence 5899999999999999999999999999999999999999999999998765443
No 33
>KOG0373|consensus
Probab=99.54 E-value=1.4e-15 Score=123.48 Aligned_cols=55 Identities=33% Similarity=0.617 Sum_probs=50.3
Q ss_pred CcccccccccCCc-eEEeecCCCccCCcCCcccceeecchhhhhhhhhhhhhcccC
Q psy18110 1 VVEEGYEFFAKRQ-LVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKTKYEQGL 55 (249)
Q Consensus 1 ~~~~G~~~~~~~~-l~tv~sapny~~~~~N~~ail~i~~~l~~~f~if~~~~~~~~ 55 (249)
||+|||+|+|+.+ |||||||||||++|+|.||+|+++++++.++++|.+.+....
T Consensus 239 LV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~ 294 (306)
T KOG0373|consen 239 LVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSR 294 (306)
T ss_pred HHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccc
Confidence 5899999999877 999999999999999999999999999999999998765533
No 34
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.46 E-value=7.8e-13 Score=103.52 Aligned_cols=156 Identities=26% Similarity=0.282 Sum_probs=100.2
Q ss_pred CCCCCcCCCCCHHHH----HHHHHhCCCCCCCeEEEecccccCCCChHHHHHHH--HHhHhhCCCcEEEEcCCccccchh
Q psy18110 58 SPLVPGDIHGQYYDL----LRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLL--LAYKIKYPENFFLLRGNHECASIN 131 (249)
Q Consensus 58 ~~~~igDiHG~~~~l----~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l--~~l~~~~~~~~~~l~GNHE~~~~~ 131 (249)
+.++|||+|+..... ..+.+.....+.+.+|++||+++++..+.+..... .......+..+++++||||.....
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~ 81 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGN 81 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHH
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccceec
Confidence 346789999999987 44444444566678999999999999988877654 444455677899999999987654
Q ss_pred hhcCcHHHHH----------------------------------HHhcHHHHHHHhHHhhcCcceEEecCeEEEecCCCC
Q psy18110 132 RIYGFYDECK----------------------------------RRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLS 177 (249)
Q Consensus 132 ~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~ 177 (249)
.......... .............+.............++++|.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~ 161 (200)
T PF00149_consen 82 SFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPY 161 (200)
T ss_dssp HHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSS
T ss_pred cccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCCC
Confidence 3321111111 001111222222223333333344568999999987
Q ss_pred CCcCCHHHHhhhcCCCCCCCcchhhHHHhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 178 PDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 178 p~~~~~~~i~~~~~~~~~~~~~~~~dllW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
+........ .....+.+.+..++++.++++++.||.
T Consensus 162 ~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~ 197 (200)
T PF00149_consen 162 SSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHT 197 (200)
T ss_dssp TTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESS
T ss_pred Ccccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCce
Confidence 644322211 124667889999999999999999995
No 35
>PRK09453 phosphodiesterase; Provisional
Probab=99.28 E-value=1.2e-11 Score=100.68 Aligned_cols=68 Identities=22% Similarity=0.302 Sum_probs=55.3
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCC--------hHHHHHHHHHhHhhCCCcEEEEcCCccccc
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQ--------SLETICLLLAYKIKYPENFFLLRGNHECAS 129 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~--------s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~ 129 (249)
+..++||+||++.+++++++.+...+.+.++++||++++|+. +.++++.+..+ +..+++|+||||...
T Consensus 2 ri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~~ 77 (182)
T PRK09453 2 KLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSEV 77 (182)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcchh
Confidence 557889999999999999998766667889999999999873 56677766554 246999999999754
No 36
>KOG0374|consensus
Probab=99.24 E-value=2e-12 Score=113.80 Aligned_cols=50 Identities=74% Similarity=1.291 Sum_probs=48.3
Q ss_pred CcccccccccCCceEEeecCCCccCCcCCcccceeecchhhhhhhhhhhh
Q psy18110 1 VVEEGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKTK 50 (249)
Q Consensus 1 ~~~~G~~~~~~~~l~tv~sapny~~~~~N~~ail~i~~~l~~~f~if~~~ 50 (249)
+|++|||||++++||||||||+||+.++|.||+|++++++.++|.++++.
T Consensus 254 vv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 254 VVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred cccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 68999999999999999999999999999999999999999999999985
No 37
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.23 E-value=6.6e-11 Score=93.51 Aligned_cols=83 Identities=27% Similarity=0.321 Sum_probs=62.1
Q ss_pred CCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhhcCcHH
Q psy18110 59 PLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYD 138 (249)
Q Consensus 59 ~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~~~~~ 138 (249)
..++||+||+...+.++++.+.. .+.++++||++++++.+. + .....+++|+||||....
T Consensus 2 i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~-------- 61 (155)
T cd00841 2 IGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD-------- 61 (155)
T ss_pred EEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC--------
Confidence 45789999999999999998654 678999999999998765 1 123469999999998532
Q ss_pred HHHHHhcHHHHHHHhHHhhcCcceEEe--c-CeEEEecCCCCC
Q psy18110 139 ECKRRFNIKLWKTFTECFNCLPVAAIV--D-EKIFCCHGGLSP 178 (249)
Q Consensus 139 ~~~~~~~~~~~~~~~~~l~~lP~~~~i--~-~~~l~vHgGi~p 178 (249)
+..+|....+ + .+++++||...+
T Consensus 62 -----------------~~~~p~~~~~~~~g~~i~v~Hg~~~~ 87 (155)
T cd00841 62 -----------------FPILPEEAVLEIGGKRIFLTHGHLYG 87 (155)
T ss_pred -----------------cccCCceEEEEECCEEEEEECCcccc
Confidence 3445644333 3 379999998644
No 38
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.21 E-value=5.7e-11 Score=94.38 Aligned_cols=62 Identities=19% Similarity=0.171 Sum_probs=48.4
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCC-CCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFP-PISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
+..++||+||+..+++.+++..... +.+.++++||++ +.++++.+..+. ..++.|+||||..
T Consensus 2 ~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 2 KILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred EEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 4568899999998888777766555 668899999998 467777776542 3599999999983
No 39
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.19 E-value=7.9e-11 Score=92.58 Aligned_cols=61 Identities=30% Similarity=0.417 Sum_probs=45.7
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccch
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 130 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~ 130 (249)
+.+++||+|++..++.++++.+ ...+.++++||+++ ..++++.+... .++.|+||||....
T Consensus 2 ki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~----~~~~~~~~~~~------~~~~v~GNHD~~~~ 62 (156)
T PF12850_consen 2 KIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFD----PEEVLELLRDI------PVYVVRGNHDNWAF 62 (156)
T ss_dssp EEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCS----HHHHHHHHHHH------EEEEE--CCHSTHH
T ss_pred EEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchh----HHHHHHHHhcC------CEEEEeCCcccccc
Confidence 4568899999999999999998 34678889999999 37777777655 69999999997553
No 40
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=99.14 E-value=1.9e-11 Score=107.38 Aligned_cols=56 Identities=32% Similarity=0.569 Sum_probs=50.5
Q ss_pred CcccccccccCCceEEeecCCCccCCcCCcccceeecc-hhhhhhhhhhhhhcccCC
Q psy18110 1 VVEEGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDE-TLMCSFQILKTKYEQGLF 56 (249)
Q Consensus 1 ~~~~G~~~~~~~~l~tv~sapny~~~~~N~~ail~i~~-~l~~~f~if~~~~~~~~~ 56 (249)
++++||+++++++|+|||||||||+.++|.||++.+++ ++.+.|++|++.+++...
T Consensus 254 ~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~~~~ 310 (316)
T cd07417 254 VKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHPNVK 310 (316)
T ss_pred ccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCCCCC
Confidence 47899999999999999999999999999999999998 889999999887665444
No 41
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.12 E-value=7.1e-10 Score=92.98 Aligned_cols=71 Identities=11% Similarity=0.151 Sum_probs=57.8
Q ss_pred CCCCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 57 SSPLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 57 ~~~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
++..++|||||++.+++++++.+.....+.+|++||++++|+...++..++..+.. .+..+++|+||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~-l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGE-AHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHh-cCCceEEEcCCCChH
Confidence 34568899999999999999977555678899999999999877777777766643 234699999999975
No 42
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=99.07 E-value=4.6e-11 Score=104.81 Aligned_cols=51 Identities=82% Similarity=1.381 Sum_probs=47.4
Q ss_pred CcccccccccCCceEEeecCCCccCCcCCcccceeecchhhhhhhhhhhhh
Q psy18110 1 VVEEGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKTKY 51 (249)
Q Consensus 1 ~~~~G~~~~~~~~l~tv~sapny~~~~~N~~ail~i~~~l~~~f~if~~~~ 51 (249)
++++||+++++++|+|||||||||+.++|.||++.+++++.+.|++|++.+
T Consensus 252 ~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~ 302 (320)
T PTZ00480 252 VVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAE 302 (320)
T ss_pred cccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCc
Confidence 478999999999999999999999999999999999999999999998653
No 43
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.02 E-value=1e-09 Score=84.88 Aligned_cols=109 Identities=18% Similarity=0.183 Sum_probs=70.5
Q ss_pred CCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChH--HHHHHHHHhHhhCCCcEEEEcCCccccchhhhcCc
Q psy18110 59 PLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 136 (249)
Q Consensus 59 ~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~--~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~~~ 136 (249)
..+|||+||++. .....+.+.+|++||+++++..+. +.++++.+++ ...+++++||||....
T Consensus 2 i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~---~~~~~~v~GNHD~~~~------ 65 (135)
T cd07379 2 FVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP---HPHKIVIAGNHDLTLD------ 65 (135)
T ss_pred EEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC---CCeEEEEECCCCCcCC------
Confidence 357899999977 122345677889999999886532 3444444432 1236789999996421
Q ss_pred HHHHHHHhcHHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcCCHHHHhhhcCCCCCCCcchhhHHHhcCCCCCCCCC
Q psy18110 137 YDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGW 216 (249)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~~~~~~~dllW~dp~~~~~~~ 216 (249)
.-+.+++++||.+.+...+. + +
T Consensus 66 ---------------------------~~~~~ilv~H~~p~~~~~~~----------------------~--~------- 87 (135)
T cd07379 66 ---------------------------PEDTDILVTHGPPYGHLDLV----------------------S--S------- 87 (135)
T ss_pred ---------------------------CCCCEEEEECCCCCcCcccc----------------------c--c-------
Confidence 11447999999643211000 0 0
Q ss_pred ccCCCCceeecCHHHHHHHHHHCCCcEEEecC
Q psy18110 217 GENDRGVSFTFGAEVVAKFLHKHDFDLICRAH 248 (249)
Q Consensus 217 ~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH 248 (249)
....|.+.+.+++++.+.+.+|-||
T Consensus 88 -------~~~~g~~~~~~~~~~~~~~~~i~GH 112 (135)
T cd07379 88 -------GQRVGCEELLNRVQRVRPKLHVFGH 112 (135)
T ss_pred -------CcccCCHHHHHHHHHHCCcEEEEcC
Confidence 1245677888888888889999888
No 44
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=99.01 E-value=1e-10 Score=102.23 Aligned_cols=52 Identities=37% Similarity=0.680 Sum_probs=46.5
Q ss_pred CcccccccccCC-ceEEeecCCCccCCcCCcccceeecchhhhhhhhhhhhhc
Q psy18110 1 VVEEGYEFFAKR-QLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKTKYE 52 (249)
Q Consensus 1 ~~~~G~~~~~~~-~l~tv~sapny~~~~~N~~ail~i~~~l~~~f~if~~~~~ 52 (249)
++++||++++++ +|+|||||||||+..+|.||++.+++++.+.|++|++.+.
T Consensus 236 ~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~ 288 (303)
T PTZ00239 236 LVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPE 288 (303)
T ss_pred hhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCc
Confidence 478999997755 5999999999999999999999999999999999987654
No 45
>KOG0371|consensus
Probab=99.01 E-value=5.5e-11 Score=98.98 Aligned_cols=53 Identities=36% Similarity=0.614 Sum_probs=49.4
Q ss_pred CcccccccccCCceEEeecCCCccCCcCCcccceeecchhhhhhhhhhhhhcc
Q psy18110 1 VVEEGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKTKYEQ 53 (249)
Q Consensus 1 ~~~~G~~~~~~~~l~tv~sapny~~~~~N~~ail~i~~~l~~~f~if~~~~~~ 53 (249)
++||||.|+++..+||+|||||||++++|.+|++.+++.....|.+|++.+..
T Consensus 253 lvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k 305 (319)
T KOG0371|consen 253 LVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRK 305 (319)
T ss_pred HHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccc
Confidence 58999999999999999999999999999999999999999999999986543
No 46
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.98 E-value=2.2e-09 Score=90.50 Aligned_cols=110 Identities=20% Similarity=0.211 Sum_probs=69.0
Q ss_pred CCCCcCCCCCHHHHH-HHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhh----
Q psy18110 59 PLVPGDIHGQYYDLL-RLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI---- 133 (249)
Q Consensus 59 ~~~igDiHG~~~~l~-~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~---- 133 (249)
.+++|||||++.... +.++. ...+.+|++||+++ .+.++++.+..+ +..++.++||||.+.....
T Consensus 3 Ia~isDiHg~~~~~~~~~l~~---~~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k~ 72 (238)
T cd07397 3 IAIVGDVHGQWDLEDIKALHL---LQPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKKG 72 (238)
T ss_pred EEEEecCCCCchHHHHHHHhc---cCCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccchH
Confidence 457899999987642 33433 33578999999976 456666666554 3468999999997654210
Q ss_pred cCc-----------------------------------------HHHHHHHhc-HHHHHHHhHHhhcCcceEEecCeEEE
Q psy18110 134 YGF-----------------------------------------YDECKRRFN-IKLWKTFTECFNCLPVAAIVDEKIFC 171 (249)
Q Consensus 134 ~~~-----------------------------------------~~~~~~~~~-~~~~~~~~~~l~~lP~~~~i~~~~l~ 171 (249)
..+ ..++.+.|+ ....+.+...++.++.+.....++++
T Consensus 73 ~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vli 152 (238)
T cd07397 73 DRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLILL 152 (238)
T ss_pred HHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEEE
Confidence 000 013444453 23445666667777533333447999
Q ss_pred ecCCCCC
Q psy18110 172 CHGGLSP 178 (249)
Q Consensus 172 vHgGi~p 178 (249)
.|+++.-
T Consensus 153 aH~~~~G 159 (238)
T cd07397 153 AHNGPSG 159 (238)
T ss_pred eCcCCcC
Confidence 9999754
No 47
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.98 E-value=5.5e-09 Score=78.55 Aligned_cols=67 Identities=27% Similarity=0.365 Sum_probs=49.7
Q ss_pred CCCcCCCCCHHHHHHHH--HhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCcc
Q psy18110 60 LVPGDIHGQYYDLLRLF--EYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 126 (249)
Q Consensus 60 ~~igDiHG~~~~l~~ll--~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE 126 (249)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 46899999999888765 34444556778999999999988776555422233335568999999999
No 48
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=98.83 E-value=1.5e-09 Score=96.96 Aligned_cols=49 Identities=29% Similarity=0.526 Sum_probs=43.3
Q ss_pred cccccccccC---CceEEeecCCCcc------CCcCCcccceeecch--hhhhhhhhhhh
Q psy18110 2 VEEGYEFFAK---RQLVTLFSAPNYC------GEFDNAGAMMSVDET--LMCSFQILKTK 50 (249)
Q Consensus 2 ~~~G~~~~~~---~~l~tv~sapny~------~~~~N~~ail~i~~~--l~~~f~if~~~ 50 (249)
|++||+++++ ++|+||||||||| +.++|+||++.+++. ..++|++|++.
T Consensus 307 v~~Gy~~~~~~~~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 307 MNKGYTVDHDVESGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred hhCceEEeccCCCCcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEeecc
Confidence 6899999887 9999999999999 689999999988654 57899999876
No 49
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.78 E-value=4.8e-08 Score=79.24 Aligned_cols=58 Identities=24% Similarity=0.327 Sum_probs=41.4
Q ss_pred CCCCcCCC-CCHH-----HHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 59 PLVPGDIH-GQYY-----DLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 59 ~~~igDiH-G~~~-----~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
..||||.| |... .+.++++. .+.+.++.+||+++ .++++++..++ ..+++|+||||..
T Consensus 2 i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 2 VLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred EEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 35789999 5533 34555543 44678999999987 77777776652 2599999999973
No 50
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.76 E-value=7.2e-08 Score=74.08 Aligned_cols=56 Identities=20% Similarity=0.208 Sum_probs=41.5
Q ss_pred CCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCcc
Q psy18110 60 LVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 126 (249)
Q Consensus 60 ~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE 126 (249)
.||||.||..+.+.++... ..+.+.++++||+. .+++..+..+ .+..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc
Confidence 3789999998888887765 45668899999973 3445555544 2235899999999
No 51
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.70 E-value=1.1e-07 Score=80.70 Aligned_cols=71 Identities=18% Similarity=0.199 Sum_probs=48.0
Q ss_pred CCCCCCcCCCCC------HHHHHHHHHhCCCCCCCeEEEecccccC-------CCChHHHHHHHHHhHhhCCCcEEEEcC
Q psy18110 57 SSPLVPGDIHGQ------YYDLLRLFEYGGFPPISNYLFLGDYVDR-------GKQSLETICLLLAYKIKYPENFFLLRG 123 (249)
Q Consensus 57 ~~~~~igDiHG~------~~~l~~ll~~~~~~~~~~~vflGD~vdr-------G~~s~~~l~~l~~l~~~~~~~~~~l~G 123 (249)
|+.++|||+|.. ..++.+.|+.. ....+.++++||++|. .+...++++++..++. .+..++++.|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeC
Confidence 356789999954 23455555432 2345789999999985 2334567777777753 3347999999
Q ss_pred Cccccc
Q psy18110 124 NHECAS 129 (249)
Q Consensus 124 NHE~~~ 129 (249)
|||...
T Consensus 79 NHD~~~ 84 (241)
T PRK05340 79 NRDFLL 84 (241)
T ss_pred CCchhh
Confidence 999743
No 52
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.66 E-value=5.8e-08 Score=77.53 Aligned_cols=66 Identities=26% Similarity=0.223 Sum_probs=46.6
Q ss_pred CCCcCCCCCHHHHHHHH-HhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 60 LVPGDIHGQYYDLLRLF-EYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 60 ~~igDiHG~~~~l~~ll-~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
.++||+|++...+...+ +.......+.++++||+++++..+.... ++.. ...+..+++++||||..
T Consensus 2 ~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 2 QYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred ceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 36899999988776665 3333455677889999999887665543 2222 22445799999999975
No 53
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.62 E-value=6e-07 Score=69.78 Aligned_cols=53 Identities=25% Similarity=0.246 Sum_probs=34.9
Q ss_pred HHHHhCCCCCCCeEEEecccccCCCCh--HHHHHHHHHhHhhCCCcEEEEcCCccc
Q psy18110 74 RLFEYGGFPPISNYLFLGDYVDRGKQS--LETICLLLAYKIKYPENFFLLRGNHEC 127 (249)
Q Consensus 74 ~ll~~~~~~~~~~~vflGD~vdrG~~s--~~~l~~l~~l~~~~~~~~~~l~GNHE~ 127 (249)
++++.+...+.+.++++||+++.|... .+..+++..+.... ..++.++||||.
T Consensus 26 ~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD~ 80 (144)
T cd07400 26 RLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHDV 80 (144)
T ss_pred HHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCeE
Confidence 345555455668899999999988742 12334444443211 279999999998
No 54
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.54 E-value=1.1e-07 Score=76.79 Aligned_cols=63 Identities=25% Similarity=0.254 Sum_probs=45.0
Q ss_pred CCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCCh-HHHHHHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 60 LVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQS-LETICLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 60 ~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s-~~~l~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
.++||+||++..+.+ ..+...+.+.+|++||++++|... .+.++.+.+ .+..++.+.||||..
T Consensus 2 ~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~ 65 (188)
T cd07392 2 LAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTP 65 (188)
T ss_pred EEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCH
Confidence 467999999999877 333334567889999999998763 333333322 345699999999974
No 55
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.52 E-value=2.7e-07 Score=77.86 Aligned_cols=168 Identities=13% Similarity=0.139 Sum_probs=85.3
Q ss_pred CCCcCCCCCH------HHHHHHHHhCCCCCCCeEEEecccccCC-----CC--hHHHHHHHHHhHhhCCCcEEEEcCCcc
Q psy18110 60 LVPGDIHGQY------YDLLRLFEYGGFPPISNYLFLGDYVDRG-----KQ--SLETICLLLAYKIKYPENFFLLRGNHE 126 (249)
Q Consensus 60 ~~igDiHG~~------~~l~~ll~~~~~~~~~~~vflGD~vdrG-----~~--s~~~l~~l~~l~~~~~~~~~~l~GNHE 126 (249)
++|||+|... ..+.+.+.... ...+.++++||++|.. +. ..++.+.+..++. .+..++.+.||||
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNHD 79 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNRD 79 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCCc
Confidence 5789999643 23444444322 2467889999999952 11 1345566666643 2457999999999
Q ss_pred ccchhhhcCcHHHHHHHhcHHHHHHHhHHhhcCcceEEe-cCeEEEecCCCCCCcC-CHHHHhhhcCCC-------CCC-
Q psy18110 127 CASINRIYGFYDECKRRFNIKLWKTFTECFNCLPVAAIV-DEKIFCCHGGLSPDLQ-SMEQIRRIMRPT-------DVP- 196 (249)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i-~~~~l~vHgGi~p~~~-~~~~i~~~~~~~-------~~~- 196 (249)
...-. ...+..+ ...+.. |....+ +.+++++||-....-. .....++..|.. ..+
T Consensus 80 ~~~~~-------~~~~~~g-------i~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~~ 144 (231)
T TIGR01854 80 FLIGK-------RFAREAG-------MTLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLPL 144 (231)
T ss_pred hhhhH-------HHHHHCC-------CEEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCCH
Confidence 74211 0000000 111111 222233 4589999998754211 111122221110 000
Q ss_pred -CcchhhHHHhcCCCCCCCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecC
Q psy18110 197 -DQGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAH 248 (249)
Q Consensus 197 -~~~~~~dllW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH 248 (249)
.-..+...+++....... ...-.-....++.+++.+++++.+.+|.||
T Consensus 145 ~~r~~l~~~~~~~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH 193 (231)
T TIGR01854 145 AVRVKLARKIRAESRADKQ----MKSQDIMDVNPAEVAAVMRRYGVDRLIHGH 193 (231)
T ss_pred HHHHHHHHHHHHHHHHhcC----CCcchhhCCCHHHHHHHHHHcCCCEEEECC
Confidence 011223344443221100 000011233678889999999999999999
No 56
>KOG0376|consensus
Probab=98.47 E-value=7.3e-08 Score=87.14 Aligned_cols=55 Identities=33% Similarity=0.625 Sum_probs=49.0
Q ss_pred cccccccccCCceEEeecCCCccCCcCCcccceeec-chhhhhhhhhhhhhcccCC
Q psy18110 2 VEEGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVD-ETLMCSFQILKTKYEQGLF 56 (249)
Q Consensus 2 ~~~G~~~~~~~~l~tv~sapny~~~~~N~~ail~i~-~~l~~~f~if~~~~~~~~~ 56 (249)
.++||++.++++|+|||||||||.+.+|.+|++.++ .++.+.+..|.+.+++...
T Consensus 409 ~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~~ 464 (476)
T KOG0376|consen 409 KDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDVK 464 (476)
T ss_pred CCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCCC
Confidence 478999999999999999999999999999999998 6788888889888776554
No 57
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.41 E-value=4.6e-07 Score=78.33 Aligned_cols=70 Identities=20% Similarity=0.047 Sum_probs=51.6
Q ss_pred CCCCCCcCCCCC----HHHHHHHHHhCCCCCCCeEEEecccccCC--CChHHHHHHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 57 SSPLVPGDIHGQ----YYDLLRLFEYGGFPPISNYLFLGDYVDRG--KQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 57 ~~~~~igDiHG~----~~~l~~ll~~~~~~~~~~~vflGD~vdrG--~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
.+.+.+||+|.. ...+.++++.+...+.+.++++||++|++ .+..++.+.+..++.. ..++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 456678999987 56678888776655667889999999943 3334566677777643 3599999999974
No 58
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.36 E-value=4.8e-06 Score=70.18 Aligned_cols=65 Identities=26% Similarity=0.233 Sum_probs=43.9
Q ss_pred CCCcCCCCC------------HHHHHHHHHhCCCC--CCCeEEEecccccCCCCh--HHHHHHHHHhHhhCCCcEEEEcC
Q psy18110 60 LVPGDIHGQ------------YYDLLRLFEYGGFP--PISNYLFLGDYVDRGKQS--LETICLLLAYKIKYPENFFLLRG 123 (249)
Q Consensus 60 ~~igDiHG~------------~~~l~~ll~~~~~~--~~~~~vflGD~vdrG~~s--~~~l~~l~~l~~~~~~~~~~l~G 123 (249)
+++||+|=. ...|+++++.+... +.+.+|++||+++.|... ..+++.+.. .+..++.++|
T Consensus 3 ~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~----~~~p~~~v~G 78 (240)
T cd07402 3 AQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAA----LPIPVYLLPG 78 (240)
T ss_pred EEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhh----cCCCEEEeCC
Confidence 467999944 44677777765443 567789999999987532 122233333 3457999999
Q ss_pred Ccccc
Q psy18110 124 NHECA 128 (249)
Q Consensus 124 NHE~~ 128 (249)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 59
>KOG0377|consensus
Probab=98.32 E-value=3.3e-07 Score=81.83 Aligned_cols=49 Identities=33% Similarity=0.502 Sum_probs=45.9
Q ss_pred cccccccccCCceEEeecCCCccCCcCCcccceeecchhhhhhhhhhhh
Q psy18110 2 VEEGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKTK 50 (249)
Q Consensus 2 ~~~G~~~~~~~~l~tv~sapny~~~~~N~~ail~i~~~l~~~f~if~~~ 50 (249)
..|||||.+|++++|||||+||.....|.||.+++.+.+.+.|+++.+.
T Consensus 384 KpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~ 432 (631)
T KOG0377|consen 384 KPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAA 432 (631)
T ss_pred CCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHhh
Confidence 4799999999999999999999999999999999999999999988754
No 60
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.32 E-value=1.5e-06 Score=72.60 Aligned_cols=67 Identities=21% Similarity=0.138 Sum_probs=41.3
Q ss_pred CCCcCCCCC----HHHH----HHHHHhCCCCCCCeEEEecccccCCCChH---HHHHHHHHhHhhCCCcEEEEcCCccc
Q psy18110 60 LVPGDIHGQ----YYDL----LRLFEYGGFPPISNYLFLGDYVDRGKQSL---ETICLLLAYKIKYPENFFLLRGNHEC 127 (249)
Q Consensus 60 ~~igDiHG~----~~~l----~~ll~~~~~~~~~~~vflGD~vdrG~~s~---~~l~~l~~l~~~~~~~~~~l~GNHE~ 127 (249)
+++||+|-- .+.+ ..+++.+.....+.+|++||+++.+.... ...+.+..+.. .+-.++.++||||.
T Consensus 4 ~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~~p~~~~~GNHD~ 81 (214)
T cd07399 4 AVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDK-AGIPYSVLAGNHDL 81 (214)
T ss_pred EEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHH-cCCcEEEECCCCcc
Confidence 467999842 2233 34445444445577889999999998443 22233333321 23458899999994
No 61
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.29 E-value=7.1e-07 Score=74.43 Aligned_cols=69 Identities=28% Similarity=0.249 Sum_probs=51.4
Q ss_pred CCCCcCCCCCHH----HHHHHHHhCCCCCCCeEEEecccccCCCChH-HHHHHHHHhHhhCCCcEEEEcCCccccc
Q psy18110 59 PLVPGDIHGQYY----DLLRLFEYGGFPPISNYLFLGDYVDRGKQSL-ETICLLLAYKIKYPENFFLLRGNHECAS 129 (249)
Q Consensus 59 ~~~igDiHG~~~----~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~-~~l~~l~~l~~~~~~~~~~l~GNHE~~~ 129 (249)
.++++|+|.... .+.++++.+.....+.++++||+++.+.... ...+++..++ .+..++.+.||||...
T Consensus 4 i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 4 IAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred EEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 457899998744 6777877766555678889999999987764 5555655543 3456999999999754
No 62
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.25 E-value=5.5e-06 Score=66.71 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=46.3
Q ss_pred CCCCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccc
Q psy18110 57 SSPLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECAS 129 (249)
Q Consensus 57 ~~~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~ 129 (249)
++..|+||.|+...+-++.++.....+.+.+|.+||++...... .+..- ...+++.|+||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~-----~l~~~---~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD-----ALEGG---LAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH-----Hhhcc---cccceEEEEccCCCcc
Confidence 34568899999997666666666666778899999999765422 11110 1358999999999853
No 63
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.23 E-value=7.7e-06 Score=67.30 Aligned_cols=46 Identities=13% Similarity=0.108 Sum_probs=31.8
Q ss_pred CCCCCeEEEecccccCCCCh---HHHHHHHHHhHhhCCCcEEEEcCCcc
Q psy18110 81 FPPISNYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLLRGNHE 126 (249)
Q Consensus 81 ~~~~~~~vflGD~vdrG~~s---~~~l~~l~~l~~~~~~~~~~l~GNHE 126 (249)
....+.+|++||+++.+... .+.+..+.+.....+-.++.+.||||
T Consensus 39 ~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 87 (199)
T cd07383 39 AEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAATFGNHD 87 (199)
T ss_pred hcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEECccCC
Confidence 34557899999999977653 45555444333334457899999999
No 64
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.21 E-value=1.9e-06 Score=73.03 Aligned_cols=67 Identities=22% Similarity=0.148 Sum_probs=48.2
Q ss_pred CCCCcCCCCCH------HHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 59 PLVPGDIHGQY------YDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 59 ~~~igDiHG~~------~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
.+.++|+|.++ ..+.++++.+...+.+.+|++||++++.+.+.+.++.+.++ .+..+++|.||||..
T Consensus 2 i~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 2 IAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred EEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 35689999763 23667777665555778999999999876666665555443 345799999999974
No 65
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.19 E-value=1.2e-06 Score=67.51 Aligned_cols=116 Identities=42% Similarity=0.714 Sum_probs=89.1
Q ss_pred hcCcHHHHHHHhcHH-HHHH---HhHHhhcCcceEEecC-eEEEecCCCCCCc-CCHHHHhhhcCCC--CCCCcchhhHH
Q psy18110 133 IYGFYDECKRRFNIK-LWKT---FTECFNCLPVAAIVDE-KIFCCHGGLSPDL-QSMEQIRRIMRPT--DVPDQGLLCDL 204 (249)
Q Consensus 133 ~~~~~~~~~~~~~~~-~~~~---~~~~l~~lP~~~~i~~-~~l~vHgGi~p~~-~~~~~i~~~~~~~--~~~~~~~~~dl 204 (249)
.+++..++...+... .|.. ..++++.+|+.+.++. .+++.|++++|.. ..+.++....+.. .....+...+.
T Consensus 6 ~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~~~ 85 (155)
T COG0639 6 LYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTHDL 85 (155)
T ss_pred hhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccccccc
Confidence 344444444444332 4555 8999999999998888 8999999999976 6777777777665 56666777777
Q ss_pred HhcCCCCC-CCCCccCCCCceeecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 205 LWSDPDKD-TMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 205 lW~dp~~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
+|+++... ...|.++++|.+..| ++....|+..+..+.+.|+|+
T Consensus 86 ~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~ 130 (155)
T COG0639 86 LWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHV 130 (155)
T ss_pred cCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeE
Confidence 99998874 678999999998777 788899998888877888874
No 66
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.14 E-value=8.8e-06 Score=67.50 Aligned_cols=69 Identities=23% Similarity=0.235 Sum_probs=38.6
Q ss_pred CCCcCCCCC---HH---HHHHHHHhCCCCCCCeEEEecccccCC-----C--Ch-HHHHHHHHHhHhhCCCcEEEEcCCc
Q psy18110 60 LVPGDIHGQ---YY---DLLRLFEYGGFPPISNYLFLGDYVDRG-----K--QS-LETICLLLAYKIKYPENFFLLRGNH 125 (249)
Q Consensus 60 ~~igDiHG~---~~---~l~~ll~~~~~~~~~~~vflGD~vdrG-----~--~s-~~~l~~l~~l~~~~~~~~~~l~GNH 125 (249)
++|||+|-. .. .+..+++.......+.+|++||++|.- . .. .+.+..+..+. ..+..++.+.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCCc
Confidence 478999922 11 223333322113567899999999841 1 11 12212232222 2446899999999
Q ss_pred cccc
Q psy18110 126 ECAS 129 (249)
Q Consensus 126 E~~~ 129 (249)
|..+
T Consensus 80 D~~~ 83 (217)
T cd07398 80 DFLL 83 (217)
T ss_pred hHHH
Confidence 9854
No 67
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.09 E-value=7.2e-06 Score=76.86 Aligned_cols=112 Identities=16% Similarity=0.238 Sum_probs=61.2
Q ss_pred CCCCCcCCC-CCH----HHHHHHHHhCC---------CCCCCeEEEecccccC-CCCh---------------HHHHHHH
Q psy18110 58 SPLVPGDIH-GQY----YDLLRLFEYGG---------FPPISNYLFLGDYVDR-GKQS---------------LETICLL 107 (249)
Q Consensus 58 ~~~~igDiH-G~~----~~l~~ll~~~~---------~~~~~~~vflGD~vdr-G~~s---------------~~~l~~l 107 (249)
..++|||+| |.. ..+..+++.+. ....+.+|++||++|. |+.+ .++.+++
T Consensus 245 ~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~L 324 (504)
T PRK04036 245 YAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEYL 324 (504)
T ss_pred EEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHHH
Confidence 345679999 552 34555555433 2234679999999994 3221 1344455
Q ss_pred HHhHhhCCCcEEEEcCCccccchhhhc-CcHHHHHHHhcHHHHHHHhHHhhcCcceEEecC-eEEEecCCC
Q psy18110 108 LAYKIKYPENFFLLRGNHECASINRIY-GFYDECKRRFNIKLWKTFTECFNCLPVAAIVDE-KIFCCHGGL 176 (249)
Q Consensus 108 ~~l~~~~~~~~~~l~GNHE~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~-~~l~vHgGi 176 (249)
.++. ..-.+++++||||........ .+...+...+. ..-..++.. |....+++ +++++||-.
T Consensus 325 ~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~----~~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 325 KQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFP----EHNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred Hhhh--cCCeEEEecCCCcchhhccCCCCccHHHHHhcC----cCCeEEecC-CeEEEECCEEEEEECCCC
Confidence 5443 234799999999975432211 11111111111 112344555 65555554 799999974
No 68
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.09 E-value=6.9e-06 Score=70.81 Aligned_cols=71 Identities=20% Similarity=0.161 Sum_probs=48.7
Q ss_pred CCCcCCC--C-----------CHHHHHHHHHhCCCCCCCeEEEecccccCCCC-hHHHHHHHHHhHhhCCCcEEEEcCCc
Q psy18110 60 LVPGDIH--G-----------QYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQ-SLETICLLLAYKIKYPENFFLLRGNH 125 (249)
Q Consensus 60 ~~igDiH--G-----------~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~-s~~~l~~l~~l~~~~~~~~~~l~GNH 125 (249)
.+|||+| . ..+.+.++++.+.....+.+|++||+++.|.. +.+-+..+.+.-...+..++.++|||
T Consensus 4 ~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~GNH 83 (267)
T cd07396 4 GIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLGNH 83 (267)
T ss_pred EEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecCcc
Confidence 5689999 2 24667777877755556789999999998863 33444444443333445799999999
Q ss_pred cccch
Q psy18110 126 ECASI 130 (249)
Q Consensus 126 E~~~~ 130 (249)
|....
T Consensus 84 D~~~~ 88 (267)
T cd07396 84 DLYNP 88 (267)
T ss_pred ccccc
Confidence 98543
No 69
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=98.08 E-value=9e-06 Score=65.45 Aligned_cols=60 Identities=18% Similarity=0.094 Sum_probs=36.0
Q ss_pred HHHHHHHHhCCCCCCCeEEEecccccCCCChH-HHHHHH-HHhHhhCCCcEEEEcCCccccc
Q psy18110 70 YDLLRLFEYGGFPPISNYLFLGDYVDRGKQSL-ETICLL-LAYKIKYPENFFLLRGNHECAS 129 (249)
Q Consensus 70 ~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~-~~l~~l-~~l~~~~~~~~~~l~GNHE~~~ 129 (249)
+.+.++++.+...+.+.+|++||+++....+. +....+ .......+..+++++||||...
T Consensus 28 ~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 28 DTLERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 34455555554455688999999998654322 212211 1111224457999999999854
No 70
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.05 E-value=7e-06 Score=70.29 Aligned_cols=71 Identities=24% Similarity=0.271 Sum_probs=47.2
Q ss_pred CCCCCcCCCCC------------HHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHH----HHHHHhHhhCCCcEEEE
Q psy18110 58 SPLVPGDIHGQ------------YYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFLL 121 (249)
Q Consensus 58 ~~~~igDiHG~------------~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l----~~l~~l~~~~~~~~~~l 121 (249)
+.+.++|+|-. ...|.++++.+.....+.+++.||++|+...+.+.. +++..++...|-.++++
T Consensus 2 kilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~i 81 (253)
T TIGR00619 2 RILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVVI 81 (253)
T ss_pred EEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 34567899832 235566666655556678999999999876554432 34444443333579999
Q ss_pred cCCcccc
Q psy18110 122 RGNHECA 128 (249)
Q Consensus 122 ~GNHE~~ 128 (249)
.||||..
T Consensus 82 ~GNHD~~ 88 (253)
T TIGR00619 82 SGNHDSA 88 (253)
T ss_pred ccCCCCh
Confidence 9999964
No 71
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.03 E-value=3.7e-05 Score=64.24 Aligned_cols=164 Identities=16% Similarity=0.229 Sum_probs=85.9
Q ss_pred CCCcCCCCC------HHHHHHHHHhCCCCCCCeEEEecccccC--CCC--h---HHHHHHHHHhHhhCCCcEEEEcCCcc
Q psy18110 60 LVPGDIHGQ------YYDLLRLFEYGGFPPISNYLFLGDYVDR--GKQ--S---LETICLLLAYKIKYPENFFLLRGNHE 126 (249)
Q Consensus 60 ~~igDiHG~------~~~l~~ll~~~~~~~~~~~vflGD~vdr--G~~--s---~~~l~~l~~l~~~~~~~~~~l~GNHE 126 (249)
+.|||+|=. .+.|.+.|+... +..+.+++|||++|- |.+ + .++...|..+ .+.+.+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchH
Confidence 358999855 344566666533 355789999999972 332 2 3344444333 235568999999999
Q ss_pred ccchhhhcCcHHHHHHHhcHHHHHHHhHHhhcCcceEEe---cCeEEEecCCCCCCcCCHHHHhhhcCCCCCC-------
Q psy18110 127 CASINRIYGFYDECKRRFNIKLWKTFTECFNCLPVAAIV---DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVP------- 196 (249)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i---~~~~l~vHgGi~p~~~~~~~i~~~~~~~~~~------- 196 (249)
..+- ..++ + -..-+.-+|-...+ +++++++||..--.. ..+.....+....+
T Consensus 79 fll~-~~f~------~---------~~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~--~~~y~~~r~~~~~~~~~~lfl 140 (237)
T COG2908 79 FLLG-KRFA------Q---------EAGGMTLLPDPIVLDLYGKRILLAHGDTFCTD--DRAYQWFRYKVHWAWLQLLFL 140 (237)
T ss_pred HHHH-HHHH------h---------hcCceEEcCcceeeeecCcEEEEEeCCcccch--HHHHHHHHHHcccHHHHHHHH
Confidence 5332 1110 0 00112223433332 568999999763211 11111111111110
Q ss_pred ---Cc--chhhHHHhcCCCCCCCCCccCC--CCce-eecCHHHHHHHHHHCCCcEEEecC
Q psy18110 197 ---DQ--GLLCDLLWSDPDKDTMGWGEND--RGVS-FTFGAEVVAKFLHKHDFDLICRAH 248 (249)
Q Consensus 197 ---~~--~~~~dllW~dp~~~~~~~~~~~--rg~~-~~fg~~~~~~fl~~~~~~~iirgH 248 (249)
.. ..+..-+|+.- .|.... .... ....++++.+-+++++++.+|.||
T Consensus 141 nl~l~~R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH 195 (237)
T COG2908 141 NLPLRVRRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGH 195 (237)
T ss_pred HhHHHHHHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecC
Confidence 00 11223355443 122211 1111 134788999999999999999999
No 72
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.96 E-value=1.6e-05 Score=63.77 Aligned_cols=44 Identities=30% Similarity=0.406 Sum_probs=32.7
Q ss_pred CCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccch
Q psy18110 82 PPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 130 (249)
Q Consensus 82 ~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~ 130 (249)
.+.+.+|++||+++++..+.. ++.+.++ +..+++|+||||....
T Consensus 41 ~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 41 GPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLIKGNHDSSLE 84 (168)
T ss_pred CCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEEeCCCCchhh
Confidence 356789999999999986644 4444443 3469999999997644
No 73
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.94 E-value=1.6e-05 Score=63.09 Aligned_cols=48 Identities=25% Similarity=0.234 Sum_probs=30.5
Q ss_pred CCCCeEEEecccccCCCCh-HHHH-HHHHHhHhh---C-CCcEEEEcCCccccc
Q psy18110 82 PPISNYLFLGDYVDRGKQS-LETI-CLLLAYKIK---Y-PENFFLLRGNHECAS 129 (249)
Q Consensus 82 ~~~~~~vflGD~vdrG~~s-~~~l-~~l~~l~~~---~-~~~~~~l~GNHE~~~ 129 (249)
...+.+|++||+++.+... .+.. ..+..++.. . +..++.+.||||...
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 3457899999999987642 2222 223333222 1 346999999999854
No 74
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.94 E-value=1.3e-05 Score=71.54 Aligned_cols=71 Identities=25% Similarity=0.345 Sum_probs=47.1
Q ss_pred CCCCCcCCC-C-----------CHHHHHHHHHhCCCCCCCeEEEecccccCC-CChHHHHHHHHH--h--HhhCCCcEEE
Q psy18110 58 SPLVPGDIH-G-----------QYYDLLRLFEYGGFPPISNYLFLGDYVDRG-KQSLETICLLLA--Y--KIKYPENFFL 120 (249)
Q Consensus 58 ~~~~igDiH-G-----------~~~~l~~ll~~~~~~~~~~~vflGD~vdrG-~~s~~~l~~l~~--l--~~~~~~~~~~ 120 (249)
+.+-+||+| | ....|.++++.+.....+.+|+.||++|+. +.+.+++.++.. + -...+-.+++
T Consensus 2 KilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~ 81 (340)
T PHA02546 2 KILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLHV 81 (340)
T ss_pred eEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 345678888 3 134566666666556668899999999985 445555544433 1 1123457999
Q ss_pred EcCCcccc
Q psy18110 121 LRGNHECA 128 (249)
Q Consensus 121 l~GNHE~~ 128 (249)
|.||||..
T Consensus 82 I~GNHD~~ 89 (340)
T PHA02546 82 LVGNHDMY 89 (340)
T ss_pred EccCCCcc
Confidence 99999974
No 75
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.85 E-value=0.00024 Score=58.93 Aligned_cols=73 Identities=19% Similarity=0.170 Sum_probs=54.0
Q ss_pred CCCCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccc--cCCCChHHHHHH-HHHhHhhCCCcEEEEcCCccccch
Q psy18110 57 SSPLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYV--DRGKQSLETICL-LLAYKIKYPENFFLLRGNHECASI 130 (249)
Q Consensus 57 ~~~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~v--drG~~s~~~l~~-l~~l~~~~~~~~~~l~GNHE~~~~ 130 (249)
++...++|+||..+.+.+++..+.-...+.+|+.||+. ..|+.-...-+. +..++. ....+++++||.|...+
T Consensus 4 mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~-~~~~v~avpGNcD~~~v 79 (226)
T COG2129 4 MKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKE-LGIPVLAVPGNCDPPEV 79 (226)
T ss_pred ceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHh-cCCeEEEEcCCCChHHH
Confidence 45567899999999999999988766778899999999 777654332221 333332 33579999999997644
No 76
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.85 E-value=0.00021 Score=61.16 Aligned_cols=58 Identities=12% Similarity=-0.006 Sum_probs=35.4
Q ss_pred HHHHHHHhCCCC--CCCeEEEecccccCCCChH---HHHHHHHH-hHhh-CCCcEEEEcCCcccc
Q psy18110 71 DLLRLFEYGGFP--PISNYLFLGDYVDRGKQSL---ETICLLLA-YKIK-YPENFFLLRGNHECA 128 (249)
Q Consensus 71 ~l~~ll~~~~~~--~~~~~vflGD~vdrG~~s~---~~l~~l~~-l~~~-~~~~~~~l~GNHE~~ 128 (249)
.|+++++.+... ..+.+|++||+++.|.... +....+.+ ++.. .+..++.++||||..
T Consensus 35 ~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~ 99 (262)
T cd07395 35 LTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVG 99 (262)
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCC
Confidence 356666665432 4567888999999887642 11222222 2211 234699999999974
No 77
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.84 E-value=3.8e-05 Score=64.63 Aligned_cols=69 Identities=20% Similarity=0.178 Sum_probs=43.5
Q ss_pred CCCCCCcCCC-CCHH----------------HHHHHHHhCCCCCCCeEEEecccccCCCC---hHHHHHHHHHhHhhCCC
Q psy18110 57 SSPLVPGDIH-GQYY----------------DLLRLFEYGGFPPISNYLFLGDYVDRGKQ---SLETICLLLAYKIKYPE 116 (249)
Q Consensus 57 ~~~~~igDiH-G~~~----------------~l~~ll~~~~~~~~~~~vflGD~vdrG~~---s~~~l~~l~~l~~~~~~ 116 (249)
.+..+|+|+| |--. .|+++.+.+...+.+.+|++||+.+.... ..++.+++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 4567889999 4322 23334443444456889999999976554 23333344433 24
Q ss_pred cEEEEcCCccccc
Q psy18110 117 NFFLLRGNHECAS 129 (249)
Q Consensus 117 ~~~~l~GNHE~~~ 129 (249)
.+++|+||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999754
No 78
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.83 E-value=3.1e-05 Score=67.04 Aligned_cols=69 Identities=16% Similarity=0.060 Sum_probs=45.2
Q ss_pred CCCCCCcCCC-C-----------CHHHHHHHHHhCCC--CCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEc
Q psy18110 57 SSPLVPGDIH-G-----------QYYDLLRLFEYGGF--PPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122 (249)
Q Consensus 57 ~~~~~igDiH-G-----------~~~~l~~ll~~~~~--~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~ 122 (249)
.+.+.|+|+| . ....|.++++.+.. ++.+.+|+.||+++.|. .+-+..+.+.-...+..++.+.
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~ 92 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLP 92 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeC
Confidence 3445679999 1 14667888876532 24577889999999874 2333333332223445799999
Q ss_pred CCccc
Q psy18110 123 GNHEC 127 (249)
Q Consensus 123 GNHE~ 127 (249)
||||.
T Consensus 93 GNHD~ 97 (275)
T PRK11148 93 GNHDF 97 (275)
T ss_pred CCCCC
Confidence 99997
No 79
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.82 E-value=3.1e-05 Score=64.22 Aligned_cols=60 Identities=23% Similarity=0.288 Sum_probs=40.6
Q ss_pred HHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHh-Hhh--CCCcEEEEcCCccccch
Q psy18110 71 DLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAY-KIK--YPENFFLLRGNHECASI 130 (249)
Q Consensus 71 ~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l-~~~--~~~~~~~l~GNHE~~~~ 130 (249)
.|.++++.+.....+.+|++||+++....+.+.+..+.+. +.. .+..++.+.||||....
T Consensus 29 ~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~ 91 (223)
T cd00840 29 AFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVFIIAGNHDSPSR 91 (223)
T ss_pred HHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEEEecCCCCCccc
Confidence 4677777765556678999999999876554443333222 221 24579999999997554
No 80
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.69 E-value=8.1e-05 Score=67.82 Aligned_cols=73 Identities=21% Similarity=0.220 Sum_probs=54.2
Q ss_pred CCCCCCcCCCCC------------HHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhh-----------
Q psy18110 57 SSPLVPGDIHGQ------------YYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIK----------- 113 (249)
Q Consensus 57 ~~~~~igDiHG~------------~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~----------- 113 (249)
++.+.++|+|-. +.+|.++++.+.....+.+|+.||++|++.-|.+++..++++-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~ 83 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELE 83 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchh
Confidence 345667999943 567888888887677788999999999998888877544333221
Q ss_pred -------------------------CCCcEEEEcCCccccc
Q psy18110 114 -------------------------YPENFFLLRGNHECAS 129 (249)
Q Consensus 114 -------------------------~~~~~~~l~GNHE~~~ 129 (249)
..-.|++|-||||...
T Consensus 84 ~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 84 FLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1347999999999864
No 81
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.65 E-value=9.5e-05 Score=62.43 Aligned_cols=45 Identities=29% Similarity=0.233 Sum_probs=29.2
Q ss_pred CCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 82 PPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 82 ~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
++.+.+|+.||++++++.. +....+..++. .+..+++|.||||..
T Consensus 40 ~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~-l~~~v~~V~GNHD~~ 84 (232)
T cd07393 40 APEDIVLIPGDISWAMKLE-EAKLDLAWIDA-LPGTKVLLKGNHDYW 84 (232)
T ss_pred CCCCEEEEcCCCccCCChH-HHHHHHHHHHh-CCCCeEEEeCCcccc
Confidence 3567788999999877533 33333333332 234589999999973
No 82
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.61 E-value=0.00013 Score=62.67 Aligned_cols=69 Identities=22% Similarity=0.303 Sum_probs=43.5
Q ss_pred CCCcCCCCCHHHHHHHHHhC---CCCCCCeEEEecccccCCCCh-HHHH----------HHHHHh--HhhCCCcEEEEcC
Q psy18110 60 LVPGDIHGQYYDLLRLFEYG---GFPPISNYLFLGDYVDRGKQS-LETI----------CLLLAY--KIKYPENFFLLRG 123 (249)
Q Consensus 60 ~~igDiHG~~~~l~~ll~~~---~~~~~~~~vflGD~vdrG~~s-~~~l----------~~l~~l--~~~~~~~~~~l~G 123 (249)
+|+||+||+++.+.+.++.. ...+.+.+|++||+-..+..+ .+.+ ++..-+ ....|--+++|-|
T Consensus 2 ~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~G 81 (262)
T cd00844 2 AVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGG 81 (262)
T ss_pred EEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECC
Confidence 57799999999987654432 234567888999996554333 2222 111111 2225556899999
Q ss_pred Ccccc
Q psy18110 124 NHECA 128 (249)
Q Consensus 124 NHE~~ 128 (249)
|||..
T Consensus 82 NHE~~ 86 (262)
T cd00844 82 NHEAS 86 (262)
T ss_pred CCCCH
Confidence 99963
No 83
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.55 E-value=0.0002 Score=61.63 Aligned_cols=72 Identities=19% Similarity=0.148 Sum_probs=50.8
Q ss_pred CCCCcCCCCC------HHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHh--hCCCcEEEEcCCccccch
Q psy18110 59 PLVPGDIHGQ------YYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKI--KYPENFFLLRGNHECASI 130 (249)
Q Consensus 59 ~~~igDiHG~------~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~--~~~~~~~~l~GNHE~~~~ 130 (249)
.+.|+|+|-. .+.+.++++.+...+.+.+|+.||+.+.|. .+-++.+.++-. ..+..++.++||||.+..
T Consensus 3 i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~~ 80 (301)
T COG1409 3 IAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDARVV 80 (301)
T ss_pred EEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCCch
Confidence 3467999977 446677778887666688999999999953 222333333322 466789999999998766
Q ss_pred hh
Q psy18110 131 NR 132 (249)
Q Consensus 131 ~~ 132 (249)
..
T Consensus 81 ~~ 82 (301)
T COG1409 81 NG 82 (301)
T ss_pred HH
Confidence 43
No 84
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.48 E-value=0.00012 Score=66.82 Aligned_cols=70 Identities=20% Similarity=0.202 Sum_probs=44.4
Q ss_pred CCCCCcCCCCCH--------HH----HHHHHHhCCCCCCCeEEEecccccCCCChHHHH----HHHHHhHhhCCCcEEEE
Q psy18110 58 SPLVPGDIHGQY--------YD----LLRLFEYGGFPPISNYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFLL 121 (249)
Q Consensus 58 ~~~~igDiHG~~--------~~----l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l----~~l~~l~~~~~~~~~~l 121 (249)
+.+.++|+|-.. .+ |..+++.+.....+.+|+.||++|++..+.... .++..++. .+..+++|
T Consensus 2 kilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~I 80 (407)
T PRK10966 2 RILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVVL 80 (407)
T ss_pred EEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEEE
Confidence 345678998421 11 344555555556788999999999986554332 33444442 34569999
Q ss_pred cCCcccc
Q psy18110 122 RGNHECA 128 (249)
Q Consensus 122 ~GNHE~~ 128 (249)
.||||..
T Consensus 81 ~GNHD~~ 87 (407)
T PRK10966 81 AGNHDSV 87 (407)
T ss_pred cCCCCCh
Confidence 9999953
No 85
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.45 E-value=0.00019 Score=60.94 Aligned_cols=68 Identities=16% Similarity=0.199 Sum_probs=39.5
Q ss_pred CCCcCCC--CC---HHHHHHHHHhCCCC-----CCCeEEEecccccCCCC------------h----HHHHHHHHHhHhh
Q psy18110 60 LVPGDIH--GQ---YYDLLRLFEYGGFP-----PISNYLFLGDYVDRGKQ------------S----LETICLLLAYKIK 113 (249)
Q Consensus 60 ~~igDiH--G~---~~~l~~ll~~~~~~-----~~~~~vflGD~vdrG~~------------s----~~~l~~l~~l~~~ 113 (249)
++|||+| +. -..++.+++.+.-. ..+.+|++||++|+... . ..+.+++.++.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 4689999 33 12334444433222 23678999999997310 0 12333334442
Q ss_pred CCCcEEEEcCCccccc
Q psy18110 114 YPENFFLLRGNHECAS 129 (249)
Q Consensus 114 ~~~~~~~l~GNHE~~~ 129 (249)
..-.++++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2357999999999753
No 86
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.40 E-value=0.00031 Score=60.23 Aligned_cols=69 Identities=20% Similarity=0.184 Sum_probs=40.9
Q ss_pred CCcCCCCCHH------HH-HHHHHhCCCCCCCeEEEecccccCCCCh--------H---HHHHHHHHhHhhCCCcEEEEc
Q psy18110 61 VPGDIHGQYY------DL-LRLFEYGGFPPISNYLFLGDYVDRGKQS--------L---ETICLLLAYKIKYPENFFLLR 122 (249)
Q Consensus 61 ~igDiHG~~~------~l-~~ll~~~~~~~~~~~vflGD~vdrG~~s--------~---~~l~~l~~l~~~~~~~~~~l~ 122 (249)
.++|+|-... .. ..+++.+.....+.+|++||++|+.... . +.++.+.......+..++.++
T Consensus 4 ~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~ 83 (256)
T cd07401 4 HISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFDIR 83 (256)
T ss_pred EecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEEeC
Confidence 4689985322 12 3345555445567899999999986521 1 222222222222246799999
Q ss_pred CCccccc
Q psy18110 123 GNHECAS 129 (249)
Q Consensus 123 GNHE~~~ 129 (249)
||||...
T Consensus 84 GNHD~~~ 90 (256)
T cd07401 84 GNHDLFN 90 (256)
T ss_pred CCCCcCC
Confidence 9999953
No 87
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.34 E-value=0.00043 Score=56.74 Aligned_cols=48 Identities=19% Similarity=0.331 Sum_probs=34.9
Q ss_pred CCCCeEEEecccccCCCCh--HHHHHHHHHhHhhCC----CcEEEEcCCccccc
Q psy18110 82 PPISNYLFLGDYVDRGKQS--LETICLLLAYKIKYP----ENFFLLRGNHECAS 129 (249)
Q Consensus 82 ~~~~~~vflGD~vdrG~~s--~~~l~~l~~l~~~~~----~~~~~l~GNHE~~~ 129 (249)
-..+.+||+||++|.|+.+ .+..+.+..++..++ ..++.|.||||.-.
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~ 94 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGG 94 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCC
Confidence 3467899999999999964 346666666654322 46899999999753
No 88
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.33 E-value=0.00054 Score=55.14 Aligned_cols=50 Identities=22% Similarity=0.228 Sum_probs=32.2
Q ss_pred CCCCCCeEEEecccccCCCCh--HH---HHHHHHHhHhh-C----CCcEEEEcCCccccc
Q psy18110 80 GFPPISNYLFLGDYVDRGKQS--LE---TICLLLAYKIK-Y----PENFFLLRGNHECAS 129 (249)
Q Consensus 80 ~~~~~~~~vflGD~vdrG~~s--~~---~l~~l~~l~~~-~----~~~~~~l~GNHE~~~ 129 (249)
...+.+.+|++||++|.+... .+ .+..+.++... . +..++.|.||||...
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 344567899999999988743 22 33333332111 1 357999999999865
No 89
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.30 E-value=0.0079 Score=51.62 Aligned_cols=24 Identities=4% Similarity=-0.002 Sum_probs=21.8
Q ss_pred ecCHHHHHHHHHHCCCcEEEecCC
Q psy18110 226 TFGAEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 226 ~fg~~~~~~fl~~~~~~~iirgHe 249 (249)
.-+++.....|++.+-.+|.-||+
T Consensus 202 ~l~~~~s~~il~~~~P~~vfsGhd 225 (257)
T cd08163 202 LLEPSLSEVILKAVQPVIAFSGDD 225 (257)
T ss_pred ecCHHHHHHHHHhhCCcEEEecCC
Confidence 458999999999999999999995
No 90
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.24 E-value=0.00058 Score=59.40 Aligned_cols=70 Identities=23% Similarity=0.224 Sum_probs=48.9
Q ss_pred CCCCcCCCCCHHH--HHHHHHhCCCCCCCeEEEecccccC--CCChHHHHHHHHHhHhhCCCcEEEEcCCccccch
Q psy18110 59 PLVPGDIHGQYYD--LLRLFEYGGFPPISNYLFLGDYVDR--GKQSLETICLLLAYKIKYPENFFLLRGNHECASI 130 (249)
Q Consensus 59 ~~~igDiHG~~~~--l~~ll~~~~~~~~~~~vflGD~vdr--G~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~ 130 (249)
.+-++|+|-+... ..+++..+.....+-+++.||++|+ -+....+...+..|+ .|-.++++.||||...-
T Consensus 47 iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 47 IVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGVD 120 (284)
T ss_pred EEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEecccccccc
Confidence 3456999988655 2334444433334778899999995 555666677777776 55689999999997554
No 91
>KOG0375|consensus
Probab=97.19 E-value=7.5e-05 Score=65.53 Aligned_cols=50 Identities=30% Similarity=0.632 Sum_probs=39.5
Q ss_pred ccccccccCCc------eEEeecCCCccCCcCCcccceeecchhhhhhhhhhhhhcc
Q psy18110 3 EEGYEFFAKRQ------LVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKTKYEQ 53 (249)
Q Consensus 3 ~~G~~~~~~~~------l~tv~sapny~~~~~N~~ail~i~~~l~~~f~if~~~~~~ 53 (249)
.-||..+-+.| |+|+||||||.+.++|+||+++.+++.+. ..+|.-.+++
T Consensus 290 DaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNVMN-IRQFncSPHP 345 (517)
T KOG0375|consen 290 DAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMN-IRQFNCSPHP 345 (517)
T ss_pred hhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhhcccce-eeccCCCCCC
Confidence 45888887665 79999999999999999999999887644 3456555554
No 92
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.96 E-value=0.0019 Score=50.92 Aligned_cols=66 Identities=24% Similarity=0.339 Sum_probs=47.0
Q ss_pred CCCcCCCCCHHHHHHHHHhCC--CCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCcc
Q psy18110 60 LVPGDIHGQYYDLLRLFEYGG--FPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 126 (249)
Q Consensus 60 ~~igDiHG~~~~l~~ll~~~~--~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE 126 (249)
+|+||+||+++.+.+-++.+. ..+-+.++++||+..-..++-+.-.+. .=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~-~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYK-DGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHh-cCCccCCCCEEEECCCCC
Confidence 478999999999877666532 234567888999998766653333333 334457778999999998
No 93
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.96 E-value=0.0013 Score=57.05 Aligned_cols=68 Identities=18% Similarity=0.099 Sum_probs=40.5
Q ss_pred CCCCcCCCC----CHHHHHHHHHhCCCCCCCeEEEecccccCCCCh-----HHHHHHHHHhHhhCCCcEEEEcCCccccc
Q psy18110 59 PLVPGDIHG----QYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHECAS 129 (249)
Q Consensus 59 ~~~igDiHG----~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s-----~~~l~~l~~l~~~~~~~~~~l~GNHE~~~ 129 (249)
.+++||.|. ....+.++.+. ....+.+|++||+++-+... ...+..+..+... -.++.++||||...
T Consensus 7 f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~--~P~~~~~GNHD~~~ 82 (294)
T cd00839 7 FAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASY--VPYMVTPGNHEADY 82 (294)
T ss_pred EEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhc--CCcEEcCccccccc
Confidence 356799995 34444444443 24456788999999644332 2223333333222 35889999999754
Q ss_pred h
Q psy18110 130 I 130 (249)
Q Consensus 130 ~ 130 (249)
.
T Consensus 83 ~ 83 (294)
T cd00839 83 N 83 (294)
T ss_pred C
Confidence 3
No 94
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.92 E-value=0.00097 Score=56.66 Aligned_cols=64 Identities=28% Similarity=0.291 Sum_probs=42.5
Q ss_pred CCCcCCCCCH---------HHHHHHHHhCCCCCCC-eEEEecccccCCCChH-----HHHHHHHHhHhhCCCcEEEEcCC
Q psy18110 60 LVPGDIHGQY---------YDLLRLFEYGGFPPIS-NYLFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLRGN 124 (249)
Q Consensus 60 ~~igDiHG~~---------~~l~~ll~~~~~~~~~-~~vflGD~vdrG~~s~-----~~l~~l~~l~~~~~~~~~~l~GN 124 (249)
+.++|+||.+ ..+.++++.......+ .+|..||+++.++.+. .+++.+..+. ..+ ...||
T Consensus 4 ~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~d~-~~~GN 78 (252)
T cd00845 4 LHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----YDA-VTIGN 78 (252)
T ss_pred EEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----CCE-Eeecc
Confidence 4579999776 6677777776544334 5567999999887653 4555555442 233 45699
Q ss_pred cccc
Q psy18110 125 HECA 128 (249)
Q Consensus 125 HE~~ 128 (249)
||.-
T Consensus 79 He~d 82 (252)
T cd00845 79 HEFD 82 (252)
T ss_pred cccc
Confidence 9963
No 95
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.84 E-value=0.00061 Score=56.70 Aligned_cols=71 Identities=20% Similarity=0.206 Sum_probs=43.3
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHH--------------------------HHHHHhH
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETI--------------------------CLLLAYK 111 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l--------------------------~~l~~l~ 111 (249)
+..+|+|.||+++.+.++.+.+.-...|.+||+||++-....+.|-. .++..|.
T Consensus 7 kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L~ 86 (255)
T PF14582_consen 7 KILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRILG 86 (255)
T ss_dssp EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHHH
Confidence 34578999999999999998876666788999999986554443333 2333332
Q ss_pred hhCCCcEEEEcCCccccc
Q psy18110 112 IKYPENFFLLRGNHECAS 129 (249)
Q Consensus 112 ~~~~~~~~~l~GNHE~~~ 129 (249)
..+-.+++|+||||...
T Consensus 87 -~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 87 -ELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp -CC-SEEEEE--TTS-SH
T ss_pred -hcCCcEEEecCCCCchH
Confidence 35568999999999843
No 96
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.77 E-value=0.004 Score=52.37 Aligned_cols=102 Identities=20% Similarity=0.248 Sum_probs=59.0
Q ss_pred CCCCCCcCCCCCHHHHH----------------HHHH-hCCCCCCCeEEEecccccCCCC-----hHHHHHHHHHhHhhC
Q psy18110 57 SSPLVPGDIHGQYYDLL----------------RLFE-YGGFPPISNYLFLGDYVDRGKQ-----SLETICLLLAYKIKY 114 (249)
Q Consensus 57 ~~~~~igDiHG~~~~l~----------------~ll~-~~~~~~~~~~vflGD~vdrG~~-----s~~~l~~l~~l~~~~ 114 (249)
.+..||+|+|=.++... +.++ .+.....+.+|++||+-.-.+. ..++-.++..+.. .
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~-~ 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE-R 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc-C
Confidence 45678899997666443 2222 1223445789999999764333 2444444444332 1
Q ss_pred CCcEEEEcCCccccchhhhcCcHHHHHHHhcHHHHHHHhHHhhcCcceEEecCeEEEecCCCCCCcC
Q psy18110 115 PENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQ 181 (249)
Q Consensus 115 ~~~~~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~~l~vHgGi~p~~~ 181 (249)
.+++++||||...-....++. ...++.. .++ +++++||=-.|...
T Consensus 99 --evi~i~GNHD~~i~~~~~~~~------------------v~v~~~~-~i~-~~~~~HGh~~~~~~ 143 (235)
T COG1407 99 --EVIIIRGNHDNGIEEILPGFN------------------VEVVDEL-EIG-GLLFRHGHKEPEPE 143 (235)
T ss_pred --cEEEEeccCCCccccccccCC------------------ceeeeeE-Eec-CEEEEeCCCCCccc
Confidence 599999999986543332221 1122333 234 89999997665443
No 97
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.76 E-value=0.0031 Score=57.25 Aligned_cols=61 Identities=21% Similarity=0.247 Sum_probs=43.4
Q ss_pred HHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhC---CCcEEEEcCCccccc
Q psy18110 69 YYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKY---PENFFLLRGNHECAS 129 (249)
Q Consensus 69 ~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~---~~~~~~l~GNHE~~~ 129 (249)
+.+|..+++.+.-...+.+|+.||+.|++.-|.+++..+.+.-.+. .-.+++|.||||..-
T Consensus 26 ~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~ 89 (390)
T COG0420 26 KKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVVIAGNHDSPS 89 (390)
T ss_pred HHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEEecCCCCchh
Confidence 4566666766665666889999999999888877776554432222 247999999999533
No 98
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.67 E-value=0.0041 Score=48.74 Aligned_cols=45 Identities=20% Similarity=0.217 Sum_probs=32.1
Q ss_pred CCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccc
Q psy18110 81 FPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECAS 129 (249)
Q Consensus 81 ~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~ 129 (249)
..|++.+++|||+.-.--...+..+++..| +++.++|+||||.--
T Consensus 43 v~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~GNhDk~~ 87 (186)
T COG4186 43 VGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPGNHDKCH 87 (186)
T ss_pred CCccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeCCCCCCc
Confidence 356788999999987555444444444444 678999999999743
No 99
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.57 E-value=0.0061 Score=49.96 Aligned_cols=66 Identities=20% Similarity=0.245 Sum_probs=39.7
Q ss_pred CCCCCHHHHHHHHHhCCC-CCCCeEEEecccccCCCChHHH-HHHHHHhHhhC---------------------CCcEEE
Q psy18110 64 DIHGQYYDLLRLFEYGGF-PPISNYLFLGDYVDRGKQSLET-ICLLLAYKIKY---------------------PENFFL 120 (249)
Q Consensus 64 DiHG~~~~l~~ll~~~~~-~~~~~~vflGD~vdrG~~s~~~-l~~l~~l~~~~---------------------~~~~~~ 120 (249)
|++|+-.=|.+..+.+.. -..+.++||||++|.|--+.+- .+.....+..+ ...++.
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 445555555555554432 3447788999999987543332 23444443322 135789
Q ss_pred EcCCccccc
Q psy18110 121 LRGNHECAS 129 (249)
Q Consensus 121 l~GNHE~~~ 129 (249)
|.||||.-.
T Consensus 104 V~GNHDIG~ 112 (193)
T cd08164 104 IAGNHDVGY 112 (193)
T ss_pred ECCcccCCC
Confidence 999999843
No 100
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.30 E-value=0.0032 Score=54.48 Aligned_cols=62 Identities=21% Similarity=0.196 Sum_probs=37.0
Q ss_pred CCcCCCCCH----------------HHHHHHHHhCCCCCCCeEEE-ecccccCCCCh-----------HHHHHHHHHhHh
Q psy18110 61 VPGDIHGQY----------------YDLLRLFEYGGFPPISNYLF-LGDYVDRGKQS-----------LETICLLLAYKI 112 (249)
Q Consensus 61 ~igDiHG~~----------------~~l~~ll~~~~~~~~~~~vf-lGD~vdrG~~s-----------~~~l~~l~~l~~ 112 (249)
.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..+++.+..+.
T Consensus 5 ~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~~g- 83 (277)
T cd07410 5 ATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNALG- 83 (277)
T ss_pred EEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHhcC-
Confidence 457777775 45666776654333333443 79999876522 23555555553
Q ss_pred hCCCcEEEEcCCccc
Q psy18110 113 KYPENFFLLRGNHEC 127 (249)
Q Consensus 113 ~~~~~~~~l~GNHE~ 127 (249)
--++..||||.
T Consensus 84 ----~d~~~lGNHe~ 94 (277)
T cd07410 84 ----YDAGTLGNHEF 94 (277)
T ss_pred ----CCEEeecccCc
Confidence 22455699995
No 101
>PLN02533 probable purple acid phosphatase
Probab=95.66 E-value=0.011 Score=54.52 Aligned_cols=69 Identities=16% Similarity=0.051 Sum_probs=39.5
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCCh---HHHHHHHHHhHhhCCCcEEEEcCCccccc
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLLRGNHECAS 129 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s---~~~l~~l~~l~~~~~~~~~~l~GNHE~~~ 129 (249)
+.+++||+|-. ......++.+.....+.++++||+++-+... .+-.+++..+.... .+..+.||||...
T Consensus 141 ~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~--P~m~~~GNHE~~~ 212 (427)
T PLN02533 141 KFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQR--PWMVTHGNHELEK 212 (427)
T ss_pred EEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcC--ceEEeCccccccc
Confidence 34567999632 2222344444344567788999999754332 11233333333223 4888999999753
No 102
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.62 E-value=0.019 Score=49.17 Aligned_cols=63 Identities=25% Similarity=0.184 Sum_probs=39.4
Q ss_pred CCCcCCCCC----------HHHHHHHHHhCCCCCCCeEEEecccccCCCCh-----HHHHHHHHHhHhhCCCcEEEEcCC
Q psy18110 60 LVPGDIHGQ----------YYDLLRLFEYGGFPPISNYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGN 124 (249)
Q Consensus 60 ~~igDiHG~----------~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s-----~~~l~~l~~l~~~~~~~~~~l~GN 124 (249)
+-++|+||+ +..+..+++.....+...++..||+++..+.+ ..+++.+..+. ..+ ...||
T Consensus 4 l~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~d~-~~~GN 78 (257)
T cd07408 4 LHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----YDA-VTPGN 78 (257)
T ss_pred EEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----CcE-Ecccc
Confidence 346899987 44566677665433445566699999876543 34444554432 244 45699
Q ss_pred ccc
Q psy18110 125 HEC 127 (249)
Q Consensus 125 HE~ 127 (249)
||.
T Consensus 79 Hef 81 (257)
T cd07408 79 HEF 81 (257)
T ss_pred ccc
Confidence 995
No 103
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.24 E-value=0.027 Score=48.44 Aligned_cols=21 Identities=19% Similarity=0.279 Sum_probs=17.8
Q ss_pred HHHHHHHHHHCCCcEEEecCC
Q psy18110 229 AEVVAKFLHKHDFDLICRAHQ 249 (249)
Q Consensus 229 ~~~~~~fl~~~~~~~iirgHe 249 (249)
.+.+.++++++++++++-||.
T Consensus 190 ~~~l~~l~~~~~v~~vl~GH~ 210 (277)
T cd07378 190 VDRLLPLLKKYKVDAYLSGHD 210 (277)
T ss_pred HHHHHHHHHHcCCCEEEeCCc
Confidence 456788899999999999994
No 104
>KOG1432|consensus
Probab=95.16 E-value=0.14 Score=45.21 Aligned_cols=49 Identities=18% Similarity=0.130 Sum_probs=30.6
Q ss_pred CCCCCeEEEecccccCCCChH---HHHHHHHHhHhhCCCcEEEEcCCccccch
Q psy18110 81 FPPISNYLFLGDYVDRGKQSL---ETICLLLAYKIKYPENFFLLRGNHECASI 130 (249)
Q Consensus 81 ~~~~~~~vflGD~vdrG~~s~---~~l~~l~~l~~~~~~~~~~l~GNHE~~~~ 130 (249)
....+.+||+||.|+. .... .+++-..+=.+.+.--...+.||||+...
T Consensus 98 sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 98 SEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDESD 149 (379)
T ss_pred ccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEecccccccc
Confidence 3456889999999996 3332 22322222233344457889999998654
No 105
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=95.10 E-value=0.023 Score=53.76 Aligned_cols=42 Identities=24% Similarity=0.422 Sum_probs=36.3
Q ss_pred CCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccch
Q psy18110 84 ISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 130 (249)
Q Consensus 84 ~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~ 130 (249)
.+++-.+||+.||||.+..+++.|+.. ..|=.--||||-..+
T Consensus 185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWM 226 (640)
T PF06874_consen 185 VDHLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWM 226 (640)
T ss_pred hhheeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHH
Confidence 467889999999999999999999876 478889999996555
No 106
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=95.06 E-value=0.016 Score=50.48 Aligned_cols=63 Identities=27% Similarity=0.249 Sum_probs=39.3
Q ss_pred CCcCCCCCH--------------HHHHHHHHhCCCC-CCCeEEEecccccCCCC-h-----HHHHHHHHHhHhhCCCcEE
Q psy18110 61 VPGDIHGQY--------------YDLLRLFEYGGFP-PISNYLFLGDYVDRGKQ-S-----LETICLLLAYKIKYPENFF 119 (249)
Q Consensus 61 ~igDiHG~~--------------~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~-s-----~~~l~~l~~l~~~~~~~~~ 119 (249)
.++|+||++ ..+..+++..... +...++..||++...+. + ..+++.+.++. ..+
T Consensus 5 ~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g----~Da- 79 (288)
T cd07412 5 AINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMG----VDA- 79 (288)
T ss_pred EEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhC----Cee-
Confidence 458888764 4466777765433 33456669999987654 2 24566666553 234
Q ss_pred EEcCCcccc
Q psy18110 120 LLRGNHECA 128 (249)
Q Consensus 120 ~l~GNHE~~ 128 (249)
...||||.-
T Consensus 80 ~t~GNHefd 88 (288)
T cd07412 80 SAVGNHEFD 88 (288)
T ss_pred eeecccccc
Confidence 556999953
No 107
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=94.93 E-value=0.058 Score=46.96 Aligned_cols=69 Identities=19% Similarity=0.146 Sum_probs=42.7
Q ss_pred CCcCCCCC---HHHHHHHHHhCCCC--CCCeEEEecccccCCCChHH--------HHHHHHHhHhhCC-CcEEEEcCCcc
Q psy18110 61 VPGDIHGQ---YYDLLRLFEYGGFP--PISNYLFLGDYVDRGKQSLE--------TICLLLAYKIKYP-ENFFLLRGNHE 126 (249)
Q Consensus 61 ~igDiHG~---~~~l~~ll~~~~~~--~~~~~vflGD~vdrG~~s~~--------~l~~l~~l~~~~~-~~~~~l~GNHE 126 (249)
-.|+-. | ...++++++.+... +.+.+|+.||+++.+..... .-.+...++..+| -.++.+.||||
T Consensus 42 ~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD 120 (296)
T cd00842 42 PWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHD 120 (296)
T ss_pred CCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCC
Confidence 346654 4 44556666655433 56778899999998765311 1223333443333 36999999999
Q ss_pred ccch
Q psy18110 127 CASI 130 (249)
Q Consensus 127 ~~~~ 130 (249)
..-.
T Consensus 121 ~~p~ 124 (296)
T cd00842 121 SYPV 124 (296)
T ss_pred CCcc
Confidence 8654
No 108
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=94.37 E-value=0.067 Score=45.78 Aligned_cols=59 Identities=20% Similarity=0.063 Sum_probs=39.7
Q ss_pred CCCCCHHHHHHHHHhCCCCCCC-eEEEecccccCCCC-----hHHHHHHHHHhHhhCCCcEEEEcCCccc
Q psy18110 64 DIHGQYYDLLRLFEYGGFPPIS-NYLFLGDYVDRGKQ-----SLETICLLLAYKIKYPENFFLLRGNHEC 127 (249)
Q Consensus 64 DiHG~~~~l~~ll~~~~~~~~~-~~vflGD~vdrG~~-----s~~~l~~l~~l~~~~~~~~~~l~GNHE~ 127 (249)
+-.|.+..+..++++......+ -++..||+++.++. ...+++.+..+. --....||||.
T Consensus 18 ~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 18 GPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 3356788888888876544334 46669999987753 345666666553 34567899996
No 109
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=94.33 E-value=0.06 Score=46.23 Aligned_cols=56 Identities=16% Similarity=0.111 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHhCCCC-CCCeE-EEecccccCCCCh-----HHHHHHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 67 GQYYDLLRLFEYGGFP-PISNY-LFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 67 G~~~~l~~ll~~~~~~-~~~~~-vflGD~vdrG~~s-----~~~l~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
|.+..+..+++..... ..+.+ +..||+++..+.+ ..+++.+..+ +..+.. ||||..
T Consensus 33 gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~~----g~da~~--GNHefd 95 (264)
T cd07411 33 GGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNAL----GVDAMV--GHWEFT 95 (264)
T ss_pred CcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHhh----CCeEEe--cccccc
Confidence 4567777777776443 33444 5599999887643 2445555444 223333 999963
No 110
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=94.28 E-value=0.073 Score=42.90 Aligned_cols=45 Identities=24% Similarity=0.352 Sum_probs=31.8
Q ss_pred CCCCeEEEecccc--cCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccch
Q psy18110 82 PPISNYLFLGDYV--DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 130 (249)
Q Consensus 82 ~~~~~~vflGD~v--drG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~ 130 (249)
.+++.++.-||+- -|=++..+-+.+|-+| |+.-+++|||||.+.-
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~ 88 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWS 88 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccc
Confidence 4556666689973 3445566666666654 7888999999998764
No 111
>KOG3662|consensus
Probab=93.80 E-value=0.14 Score=46.59 Aligned_cols=56 Identities=25% Similarity=0.383 Sum_probs=35.9
Q ss_pred HHHHHHhCCCC-CCCeEEEecccccCCCCh--HHHHHHHHHhHhhCCC----cEEEEcCCccc
Q psy18110 72 LLRLFEYGGFP-PISNYLFLGDYVDRGKQS--LETICLLLAYKIKYPE----NFFLLRGNHEC 127 (249)
Q Consensus 72 l~~ll~~~~~~-~~~~~vflGD~vdrG~~s--~~~l~~l~~l~~~~~~----~~~~l~GNHE~ 127 (249)
|.+.+....+. ..+-++||||++|-|... .|--+....++..++. .+..+.||||-
T Consensus 81 lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 34444443332 335577899999988764 4444455555555554 69999999996
No 112
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=93.58 E-value=0.14 Score=44.49 Aligned_cols=57 Identities=16% Similarity=0.077 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHhCCCCCCC-eEEEecccccCCCC-----hHHHHHHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 67 GQYYDLLRLFEYGGFPPIS-NYLFLGDYVDRGKQ-----SLETICLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 67 G~~~~l~~ll~~~~~~~~~-~~vflGD~vdrG~~-----s~~~l~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
|.+..+..+++........ .++-.||++...+. ...+++.+..+. ..+. ..||||.-
T Consensus 32 gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~g----~D~~-~lGNHefd 94 (281)
T cd07409 32 GGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLLG----YDAM-TLGNHEFD 94 (281)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhcC----CCEE-Eecccccc
Confidence 4466677777765433333 34448999987653 344455555442 2444 45999963
No 113
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=92.68 E-value=0.097 Score=54.26 Aligned_cols=63 Identities=21% Similarity=0.141 Sum_probs=39.7
Q ss_pred CCCcCCCCCH---HHHHHHHHhCCCCCCCeEEE-ecccccCCCCh-----HHHHHHHHHhHhhCCCcEEEEcCCccc
Q psy18110 60 LVPGDIHGQY---YDLLRLFEYGGFPPISNYLF-LGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHEC 127 (249)
Q Consensus 60 ~~igDiHG~~---~~l~~ll~~~~~~~~~~~vf-lGD~vdrG~~s-----~~~l~~l~~l~~~~~~~~~~l~GNHE~ 127 (249)
+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..+++.+..+. --....||||.
T Consensus 664 l~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 664 LHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 3469999874 55555666544333334444 89999987644 34556655542 23559999996
No 114
>KOG2863|consensus
Probab=92.18 E-value=0.35 Score=43.09 Aligned_cols=72 Identities=28% Similarity=0.415 Sum_probs=44.7
Q ss_pred CCCCCcCCCCCHHHHH---HHHHhCCCCCCCeEEEeccccc-CCCC---hHHH---HHHHHHh------HhhCCCcEEEE
Q psy18110 58 SPLVPGDIHGQYYDLL---RLFEYGGFPPISNYLFLGDYVD-RGKQ---SLET---ICLLLAY------KIKYPENFFLL 121 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~---~ll~~~~~~~~~~~vflGD~vd-rG~~---s~~~---l~~l~~l------~~~~~~~~~~l 121 (249)
++-|-|--||.++.+- .+.++.|-.+.+.++++||+=. |... ++.+ +..+.+. ...+|--.++|
T Consensus 2 rIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFI 81 (456)
T KOG2863|consen 2 RIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFI 81 (456)
T ss_pred ceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEe
Confidence 4456699999999886 4455555567788999999842 2211 1111 1111111 23366667889
Q ss_pred cCCccccc
Q psy18110 122 RGNHECAS 129 (249)
Q Consensus 122 ~GNHE~~~ 129 (249)
-||||.+.
T Consensus 82 GGNHEAsn 89 (456)
T KOG2863|consen 82 GGNHEASN 89 (456)
T ss_pred cCchHHHH
Confidence 99999864
No 115
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=90.97 E-value=0.23 Score=42.83 Aligned_cols=65 Identities=18% Similarity=0.149 Sum_probs=47.1
Q ss_pred CCCCCcCCCCC--HHHHHHHHHhCCCCC-CCeEEEecccccCC-CChHHHHHHHHHhHhhCCCcEEEEcCCccc
Q psy18110 58 SPLVPGDIHGQ--YYDLLRLFEYGGFPP-ISNYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHEC 127 (249)
Q Consensus 58 ~~~~igDiHG~--~~~l~~ll~~~~~~~-~~~~vflGD~vdrG-~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~ 127 (249)
+..+||||=|. ...+...|..+.... .+.+|..||....| .-+.++.+.|.++. -.++.+ |||+.
T Consensus 2 ~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~G----vDviT~-GNH~~ 70 (266)
T TIGR00282 2 KFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSG----VNYITM-GNHTW 70 (266)
T ss_pred eEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcC----CCEEEc-cchhc
Confidence 45678999999 677788887765443 34455589999766 45678888887663 367666 99995
No 116
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=90.96 E-value=0.17 Score=46.33 Aligned_cols=41 Identities=24% Similarity=0.388 Sum_probs=33.8
Q ss_pred CeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccch
Q psy18110 85 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 130 (249)
Q Consensus 85 ~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~ 130 (249)
+.+-.+||+-||||++..+++.|..+ ..+-.--||||...+
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~y-----hsvDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINY-----HSVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhc-----ccccccccCcceEEe
Confidence 46778999999999999999999877 357778899995443
No 117
>KOG3339|consensus
Probab=90.78 E-value=3.6 Score=33.43 Aligned_cols=85 Identities=18% Similarity=0.300 Sum_probs=65.6
Q ss_pred CeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccchhhhcCcH----------------HHHHHHhcHHH
Q psy18110 85 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY----------------DECKRRFNIKL 148 (249)
Q Consensus 85 ~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~~~~~~~----------------~~~~~~~~~~~ 148 (249)
..+|++|- |-+.-|+++++..++..+..+-+ |.|+-|.|..+....|. .|..+.+-...
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~y-I~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSY-IAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEE-EEecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 45888885 99999999999999888876655 59999998887665543 33444444567
Q ss_pred HHHHhHHhhcCcceEEecCeEEEecC
Q psy18110 149 WKTFTECFNCLPVAAIVDEKIFCCHG 174 (249)
Q Consensus 149 ~~~~~~~l~~lP~~~~i~~~~l~vHg 174 (249)
+..+...+.++++...+..+++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 77888888888888888777777777
No 118
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=90.14 E-value=0.34 Score=42.16 Aligned_cols=38 Identities=24% Similarity=0.095 Sum_probs=24.8
Q ss_pred eEEEecccccCCCCh-------HHHHHHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 86 NYLFLGDYVDRGKQS-------LETICLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 86 ~~vflGD~vdrG~~s-------~~~l~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
.++..||.+...+.+ ..+++++..+ +--....||||.-
T Consensus 53 Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m-----gyDa~tlGNHEFd 97 (282)
T cd07407 53 LLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM-----PYDLLTIGNHELY 97 (282)
T ss_pred EEEeCCCccCCeeceeeecCCChHHHHHHHhc-----CCcEEeecccccC
Confidence 455599999865432 3346666555 3455789999984
No 119
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=89.75 E-value=0.38 Score=45.43 Aligned_cols=62 Identities=24% Similarity=0.209 Sum_probs=39.0
Q ss_pred CCcCCCCCHH---------------HHHHHHHhCCCCCCC-eEEEecccccCCC------ChHHHHHHHHHhHhhCCCcE
Q psy18110 61 VPGDIHGQYY---------------DLLRLFEYGGFPPIS-NYLFLGDYVDRGK------QSLETICLLLAYKIKYPENF 118 (249)
Q Consensus 61 ~igDiHG~~~---------------~l~~ll~~~~~~~~~-~~vflGD~vdrG~------~s~~~l~~l~~l~~~~~~~~ 118 (249)
-+.|+||++. ....+++...-.... .+|=.||+++..+ .....++++..++ -=
T Consensus 31 htnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~-----yD 105 (517)
T COG0737 31 HTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG-----YD 105 (517)
T ss_pred EeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC-----Cc
Confidence 3599999988 333344443322223 3444999999833 3455677777664 34
Q ss_pred EEEcCCccc
Q psy18110 119 FLLRGNHEC 127 (249)
Q Consensus 119 ~~l~GNHE~ 127 (249)
....||||.
T Consensus 106 a~tiGNHEF 114 (517)
T COG0737 106 AMTLGNHEF 114 (517)
T ss_pred EEeeccccc
Confidence 567899995
No 120
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=89.74 E-value=0.5 Score=41.76 Aligned_cols=62 Identities=21% Similarity=0.028 Sum_probs=37.9
Q ss_pred CCcCCCCCH------HHHHHHHHhCCC-----CCCCeEEEecccccCCCC-------------hHHHHHHHHHhHhhCCC
Q psy18110 61 VPGDIHGQY------YDLLRLFEYGGF-----PPISNYLFLGDYVDRGKQ-------------SLETICLLLAYKIKYPE 116 (249)
Q Consensus 61 ~igDiHG~~------~~l~~ll~~~~~-----~~~~~~vflGD~vdrG~~-------------s~~~l~~l~~l~~~~~~ 116 (249)
-+.|+||++ ..+..+++.... .+...++..||.+..++. ...+++++..+.
T Consensus 5 htnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g----- 79 (313)
T cd08162 5 HTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG----- 79 (313)
T ss_pred EecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC-----
Confidence 358999985 344444544321 233445569999875543 345566666663
Q ss_pred cEEEEcCCccc
Q psy18110 117 NFFLLRGNHEC 127 (249)
Q Consensus 117 ~~~~l~GNHE~ 127 (249)
--....||||.
T Consensus 80 ~Da~tlGNHEF 90 (313)
T cd08162 80 VQAIALGNHEF 90 (313)
T ss_pred CcEEecccccc
Confidence 34567999995
No 121
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=89.02 E-value=0.43 Score=41.52 Aligned_cols=63 Identities=17% Similarity=0.067 Sum_probs=34.6
Q ss_pred CCcCCCCCHH----------HHHHHHHhCCC-----CCCCeEEEecccccCCCC-----hHHHHHHHHHhHhhCCCcEEE
Q psy18110 61 VPGDIHGQYY----------DLLRLFEYGGF-----PPISNYLFLGDYVDRGKQ-----SLETICLLLAYKIKYPENFFL 120 (249)
Q Consensus 61 ~igDiHG~~~----------~l~~ll~~~~~-----~~~~~~vflGD~vdrG~~-----s~~~l~~l~~l~~~~~~~~~~ 120 (249)
-++|+||++. .+..+++.... .+...++-.||.+...+. ...+++++..+. ..+.
T Consensus 5 ~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~Da~- 79 (285)
T cd07405 5 HTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YDAM- 79 (285)
T ss_pred EEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----CcEE-
Confidence 3588888643 34555554332 233345559999854332 233455555553 2444
Q ss_pred EcCCcccc
Q psy18110 121 LRGNHECA 128 (249)
Q Consensus 121 l~GNHE~~ 128 (249)
..||||.-
T Consensus 80 ~~GNHEfD 87 (285)
T cd07405 80 AVGNHEFD 87 (285)
T ss_pred eecccccc
Confidence 44999953
No 122
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=88.56 E-value=0.48 Score=38.95 Aligned_cols=62 Identities=13% Similarity=0.084 Sum_probs=36.6
Q ss_pred HHHHHHHHHhCC-CCCCCeEEEecccccCCCChH----------HHHHHHHHhHhh-----CCCcEEEEcCCccccch
Q psy18110 69 YYDLLRLFEYGG-FPPISNYLFLGDYVDRGKQSL----------ETICLLLAYKIK-----YPENFFLLRGNHECASI 130 (249)
Q Consensus 69 ~~~l~~ll~~~~-~~~~~~~vflGD~vdrG~~s~----------~~l~~l~~l~~~-----~~~~~~~l~GNHE~~~~ 130 (249)
++.|.++|+.+. ....+.+|++|+++|.-.... .....+..+... ...++++|.|+||-...
T Consensus 16 ~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 16 LEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp HHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSEEEEE--TTCTT-S
T ss_pred HHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccEEEEeCCCcccccc
Confidence 778888998877 666678999999999632221 111122222111 23589999999997554
No 123
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=88.06 E-value=1.6 Score=40.48 Aligned_cols=111 Identities=22% Similarity=0.296 Sum_probs=57.5
Q ss_pred CCCcCCCCC-----HHHHHHHHHhCCCCC----CCe-EEEecccccC-C-----------CChHHHHHHHHHhHhhCCC-
Q psy18110 60 LVPGDIHGQ-----YYDLLRLFEYGGFPP----ISN-YLFLGDYVDR-G-----------KQSLETICLLLAYKIKYPE- 116 (249)
Q Consensus 60 ~~igDiHG~-----~~~l~~ll~~~~~~~----~~~-~vflGD~vdr-G-----------~~s~~~l~~l~~l~~~~~~- 116 (249)
..++|+|=. -+++.+.++.++-+. ..+ ++..||.||. | .+..+-++.+..+-..-|.
T Consensus 229 ~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp~~ 308 (481)
T COG1311 229 ALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVPEH 308 (481)
T ss_pred EEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCCCC
Confidence 567999972 344455555544332 224 5568999994 2 2223334444444333444
Q ss_pred -cEEEEcCCccccchhhhcC-cHHHHHHHhcHHHHHHHhHHhhcCcceEEecC-eEEEecCC
Q psy18110 117 -NFFLLRGNHECASINRIYG-FYDECKRRFNIKLWKTFTECFNCLPVAAIVDE-KIFCCHGG 175 (249)
Q Consensus 117 -~~~~l~GNHE~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~-~~l~vHgG 175 (249)
.+++.+||||..-.....- +.......+ ....-.+-.=|....+++ .++..||=
T Consensus 309 I~v~i~PGnhDa~r~a~PQp~~~~~~kslf-----~~~n~~~v~NP~~~~l~G~~vL~~hG~ 365 (481)
T COG1311 309 IKVFIMPGNHDAVRQALPQPHFPELIKSLF-----SLNNLLFVSNPALVSLHGVDVLIYHGR 365 (481)
T ss_pred ceEEEecCCCCccccccCCCCcchhhcccc-----cccceEecCCCcEEEECCEEEEEecCC
Confidence 6899999999865533221 211111111 111111222255555554 68899984
No 124
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=87.89 E-value=0.51 Score=45.96 Aligned_cols=64 Identities=16% Similarity=0.047 Sum_probs=39.7
Q ss_pred CCCCcCCCCCHH----------------HHHHHHHhCCCC-CCCeEEEecccccCCCChH-------------HHHHHHH
Q psy18110 59 PLVPGDIHGQYY----------------DLLRLFEYGGFP-PISNYLFLGDYVDRGKQSL-------------ETICLLL 108 (249)
Q Consensus 59 ~~~igDiHG~~~----------------~l~~ll~~~~~~-~~~~~vflGD~vdrG~~s~-------------~~l~~l~ 108 (249)
.+-..|+||++. .+..+++.+... ++..+|-.||++...|.+- -+++.+.
T Consensus 28 IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~amN 107 (649)
T PRK09420 28 IMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYKAMN 107 (649)
T ss_pred EEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHHHHH
Confidence 344699999863 344455554322 3344556999998665431 3566666
Q ss_pred HhHhhCCCcEEEEcCCccc
Q psy18110 109 AYKIKYPENFFLLRGNHEC 127 (249)
Q Consensus 109 ~l~~~~~~~~~~l~GNHE~ 127 (249)
.+. --....||||.
T Consensus 108 ~lg-----yDa~tlGNHEF 121 (649)
T PRK09420 108 TLD-----YDVGNLGNHEF 121 (649)
T ss_pred hcC-----CcEEeccchhh
Confidence 663 45678899995
No 125
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=87.64 E-value=0.5 Score=45.79 Aligned_cols=62 Identities=18% Similarity=0.050 Sum_probs=37.1
Q ss_pred CCcCCCCCH----------------HHHHHHHHhCCCC-CCCeEEEecccccCCCCh-------------HHHHHHHHHh
Q psy18110 61 VPGDIHGQY----------------YDLLRLFEYGGFP-PISNYLFLGDYVDRGKQS-------------LETICLLLAY 110 (249)
Q Consensus 61 ~igDiHG~~----------------~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~s-------------~~~l~~l~~l 110 (249)
-+.|+||++ ..+..+++..... +...+|-.||.+...|.+ .-+++++..+
T Consensus 7 ~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~mN~l 86 (626)
T TIGR01390 7 ETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAMNLL 86 (626)
T ss_pred EEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHHhhc
Confidence 347777775 3445556554322 234455699999865543 2355666555
Q ss_pred HhhCCCcEEEEcCCccc
Q psy18110 111 KIKYPENFFLLRGNHEC 127 (249)
Q Consensus 111 ~~~~~~~~~~l~GNHE~ 127 (249)
. --....||||.
T Consensus 87 g-----yDa~tlGNHEF 98 (626)
T TIGR01390 87 K-----YDVGNLGNHEF 98 (626)
T ss_pred C-----ccEEecccccc
Confidence 3 34568899995
No 126
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=87.04 E-value=0.49 Score=49.21 Aligned_cols=63 Identities=22% Similarity=0.184 Sum_probs=37.6
Q ss_pred CCCcCCCCCH----------------HHHHHHHHhCCCCCCCeEE-EecccccCCCC--------------hHHHHHHHH
Q psy18110 60 LVPGDIHGQY----------------YDLLRLFEYGGFPPISNYL-FLGDYVDRGKQ--------------SLETICLLL 108 (249)
Q Consensus 60 ~~igDiHG~~----------------~~l~~ll~~~~~~~~~~~v-flGD~vdrG~~--------------s~~~l~~l~ 108 (249)
+-++|+||++ ..+..+++.+.......++ -.||++...+- ...++..+.
T Consensus 45 l~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~~mN 124 (1163)
T PRK09419 45 LATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIKAMN 124 (1163)
T ss_pred EEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHHHHh
Confidence 3459999985 3444555554332223344 48999986651 234555555
Q ss_pred HhHhhCCCcEEEEcCCccc
Q psy18110 109 AYKIKYPENFFLLRGNHEC 127 (249)
Q Consensus 109 ~l~~~~~~~~~~l~GNHE~ 127 (249)
.+. --....||||.
T Consensus 125 ~lg-----yDa~~lGNHEF 138 (1163)
T PRK09419 125 ALG-----YDAGTLGNHEF 138 (1163)
T ss_pred hcC-----ccEEeeccccc
Confidence 552 34567999996
No 127
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=86.73 E-value=0.95 Score=38.80 Aligned_cols=64 Identities=20% Similarity=0.142 Sum_probs=42.8
Q ss_pred CCCCcCCCCC--HHHHHHHHHhCCCCC-CCeEEEecccccCC-CChHHHHHHHHHhHhhCCCcEEEEcCCccc
Q psy18110 59 PLVPGDIHGQ--YYDLLRLFEYGGFPP-ISNYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHEC 127 (249)
Q Consensus 59 ~~~igDiHG~--~~~l~~ll~~~~~~~-~~~~vflGD~vdrG-~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~ 127 (249)
...||||=|. ...+.+.|....... .+.+|-.||....| .-+.++.+.|..+. -.+..+ ||||.
T Consensus 2 ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G----~D~iTl-GNH~f 69 (255)
T cd07382 2 ILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAG----VDVITM-GNHTW 69 (255)
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcC----CCEEEe-ccccc
Confidence 3578999998 445566666654332 34455589998766 36778888887764 356555 99985
No 128
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=82.58 E-value=2.1 Score=40.85 Aligned_cols=56 Identities=21% Similarity=0.072 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHhCCC-CCCCeEEEecccccCCCCh-----HHHHHHHHHhHhhCCCcEEEEcCCccc
Q psy18110 67 GQYYDLLRLFEYGGF-PPISNYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHEC 127 (249)
Q Consensus 67 G~~~~l~~ll~~~~~-~~~~~~vflGD~vdrG~~s-----~~~l~~l~~l~~~~~~~~~~l~GNHE~ 127 (249)
|.+..+..+++.... .++..++..||.+...+.+ ...++++..+. --....||||.
T Consensus 32 gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g-----~Da~~lGNHEF 93 (550)
T TIGR01530 32 GGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG-----FDFFTLGNHEF 93 (550)
T ss_pred CCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC-----CCEEEeccccc
Confidence 346666666666542 2344566699998765433 33455555553 45678999995
No 129
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=82.47 E-value=1.2 Score=44.48 Aligned_cols=63 Identities=22% Similarity=0.087 Sum_probs=38.2
Q ss_pred CCCcCCCCCHH----------------HHHHHHHhCCC-CCCCeEEEecccccCCCCh--------------HHHHHHHH
Q psy18110 60 LVPGDIHGQYY----------------DLLRLFEYGGF-PPISNYLFLGDYVDRGKQS--------------LETICLLL 108 (249)
Q Consensus 60 ~~igDiHG~~~----------------~l~~ll~~~~~-~~~~~~vflGD~vdrG~~s--------------~~~l~~l~ 108 (249)
+-+.|+||++. .+..+++.+.. .++..+|-.||++...|.+ .-+++.+.
T Consensus 119 L~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~amN 198 (814)
T PRK11907 119 LSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYAALE 198 (814)
T ss_pred EEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHHHHh
Confidence 34599999954 23334444322 2334466699999865432 13566666
Q ss_pred HhHhhCCCcEEEEcCCccc
Q psy18110 109 AYKIKYPENFFLLRGNHEC 127 (249)
Q Consensus 109 ~l~~~~~~~~~~l~GNHE~ 127 (249)
.|. --....||||.
T Consensus 199 ~LG-----yDA~tLGNHEF 212 (814)
T PRK11907 199 ALG-----FDAGTLGNHEF 212 (814)
T ss_pred ccC-----CCEEEechhhc
Confidence 663 34578899995
No 130
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=78.25 E-value=2 Score=41.03 Aligned_cols=62 Identities=19% Similarity=0.074 Sum_probs=34.7
Q ss_pred CCcCCCCCHH----------HHHHHHHhCC-----CCCCCeEEEecccccCCCCh-----HHHHHHHHHhHhhCCCcEEE
Q psy18110 61 VPGDIHGQYY----------DLLRLFEYGG-----FPPISNYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFL 120 (249)
Q Consensus 61 ~igDiHG~~~----------~l~~ll~~~~-----~~~~~~~vflGD~vdrG~~s-----~~~l~~l~~l~~~~~~~~~~ 120 (249)
-+.|+||.+. .+..+++... ..+...++..||.+...+.+ ..+++++..+. -.+.
T Consensus 39 ~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g----~Da~- 113 (551)
T PRK09558 39 HTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG----YDAM- 113 (551)
T ss_pred EecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----CCEE-
Confidence 4599999864 2334444432 12334455689998644322 23455555543 2444
Q ss_pred EcCCccc
Q psy18110 121 LRGNHEC 127 (249)
Q Consensus 121 l~GNHE~ 127 (249)
..||||.
T Consensus 114 tlGNHEF 120 (551)
T PRK09558 114 AVGNHEF 120 (551)
T ss_pred ccccccc
Confidence 4599995
No 131
>KOG1378|consensus
Probab=76.97 E-value=2.2 Score=39.43 Aligned_cols=71 Identities=18% Similarity=0.105 Sum_probs=37.9
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCC-CCCeEEEecccccC-CCC---hHHHHHHHHHhHhhCCCcEEEEcCCccccchh
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFP-PISNYLFLGDYVDR-GKQ---SLETICLLLAYKIKYPENFFLLRGNHECASIN 131 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdr-G~~---s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~~ 131 (249)
+..++||+ |+...-...+...... ..+.++++||+.-- +.. -.+-...+.-+...-| ....-||||.....
T Consensus 149 ~~~i~GDl-G~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vP--ymv~~GNHE~d~~~ 224 (452)
T KOG1378|consen 149 RAAIFGDM-GCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVP--YMVCSGNHEIDWPP 224 (452)
T ss_pred eEEEEccc-cccccccchHhHHhcccCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCc--eEEecccccccCCC
Confidence 44567998 3332222222222122 35678889999732 222 2334444444443333 66789999986653
No 132
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=76.53 E-value=3.5 Score=37.63 Aligned_cols=69 Identities=9% Similarity=-0.008 Sum_probs=38.3
Q ss_pred CCCCcCCCCCHHHHHHH---HHhC-CCCCCCeEEEecccccCCCCh------HHHHHHHHHhHh-hCCCcEEEEcCCccc
Q psy18110 59 PLVPGDIHGQYYDLLRL---FEYG-GFPPISNYLFLGDYVDRGKQS------LETICLLLAYKI-KYPENFFLLRGNHEC 127 (249)
Q Consensus 59 ~~~igDiHG~~~~l~~l---l~~~-~~~~~~~~vflGD~vdrG~~s------~~~l~~l~~l~~-~~~~~~~~l~GNHE~ 127 (249)
-+++||-=+....-..+ +... ...+.+.+|-+||-++.|..+ .+.++-+..-.. ...-.+++++||||.
T Consensus 29 F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNHDy 108 (394)
T PTZ00422 29 FASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQADW 108 (394)
T ss_pred EEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcccc
Confidence 35678853332222222 2221 223456677799999888765 334444442211 012369999999996
No 133
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=75.94 E-value=2.4 Score=42.14 Aligned_cols=63 Identities=22% Similarity=0.110 Sum_probs=36.9
Q ss_pred CCCcCCCCCHH----------------HHHHHHHhCCC-CCCCeEEEecccccCCCCh-------------------HHH
Q psy18110 60 LVPGDIHGQYY----------------DLLRLFEYGGF-PPISNYLFLGDYVDRGKQS-------------------LET 103 (249)
Q Consensus 60 ~~igDiHG~~~----------------~l~~ll~~~~~-~~~~~~vflGD~vdrG~~s-------------------~~~ 103 (249)
+-+.|+||++. .+..+++++.. .++..+|-.||++...+.+ .-+
T Consensus 43 L~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~~~p~ 122 (780)
T PRK09418 43 LETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSYTHPL 122 (780)
T ss_pred EEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccccchHH
Confidence 34599999853 23444544432 2334456699998544322 235
Q ss_pred HHHHHHhHhhCCCcEEEEcCCccc
Q psy18110 104 ICLLLAYKIKYPENFFLLRGNHEC 127 (249)
Q Consensus 104 l~~l~~l~~~~~~~~~~l~GNHE~ 127 (249)
++++..+. --....||||.
T Consensus 123 i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 123 YRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred HHHHhccC-----CCEEecccccc
Confidence 66666653 34568999994
No 134
>KOG3947|consensus
Probab=74.29 E-value=3.4 Score=35.64 Aligned_cols=66 Identities=21% Similarity=0.191 Sum_probs=40.9
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccccch
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 130 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~~~ 130 (249)
+.+.|+|.|+...... ..++.|.++.+||+..-|. +.|+..+=..+-..--..=+.|+||||.-+-
T Consensus 63 r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gslph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 63 RFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGSLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred EEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhccCcceeeEEEeeccceeec
Confidence 4456799999655422 3556666788999877554 4555554433322211355679999997543
No 135
>KOG2476|consensus
Probab=72.07 E-value=6 Score=36.61 Aligned_cols=67 Identities=22% Similarity=0.349 Sum_probs=48.3
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCCC--CCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCc
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGFP--PISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 125 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~~--~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNH 125 (249)
+..++||+-|+++.|.+-++++... |-+.++++|++.+--.++.|++.+...-+ ..|--++++-+|-
T Consensus 7 kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 7 KILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred eEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 5678899999999987777665443 35678889999998777788777765433 3455566666554
No 136
>KOG3325|consensus
Probab=69.85 E-value=6 Score=31.07 Aligned_cols=60 Identities=27% Similarity=0.311 Sum_probs=39.6
Q ss_pred CCCcCCCCC--HHHHHHHHHhCCCCCC-CeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 60 LVPGDIHGQ--YYDLLRLFEYGGFPPI-SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 60 ~~igDiHG~--~~~l~~ll~~~~~~~~-~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
.++||+|=- ..+|-.-+++.=.|.. .+++++|++. |.|+++++..+. .+++.+||-.|..
T Consensus 4 L~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~ 66 (183)
T KOG3325|consen 4 LVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN 66 (183)
T ss_pred EEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc
Confidence 467888742 2333333333323433 5688999975 678899998874 5899999987764
No 137
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=66.99 E-value=20 Score=31.33 Aligned_cols=72 Identities=13% Similarity=0.221 Sum_probs=46.6
Q ss_pred CCCCCcCCCCC----HHHHHHHHHhCC-CCC----CCeEEEecccccCC----CCh----HHHHHHHHH-hHhhCC----
Q psy18110 58 SPLVPGDIHGQ----YYDLLRLFEYGG-FPP----ISNYLFLGDYVDRG----KQS----LETICLLLA-YKIKYP---- 115 (249)
Q Consensus 58 ~~~~igDiHG~----~~~l~~ll~~~~-~~~----~~~~vflGD~vdrG----~~s----~~~l~~l~~-l~~~~~---- 115 (249)
..+++||+|=+ +++|.++|+... ..+ ...+|+.|+++-+. ..+ .+-++-+.. +..++|
T Consensus 29 ~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~~ 108 (291)
T PTZ00235 29 NWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLILE 108 (291)
T ss_pred EEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHHh
Confidence 34556999966 778888888763 212 34689999998763 222 233444443 223344
Q ss_pred -CcEEEEcCCccccc
Q psy18110 116 -ENFFLLRGNHECAS 129 (249)
Q Consensus 116 -~~~~~l~GNHE~~~ 129 (249)
.++++|+|-.|-+.
T Consensus 109 ~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 109 HCYLIFIPGINDPCA 123 (291)
T ss_pred cCeEEEECCCCCCCc
Confidence 68999999999754
No 138
>PF12982 DUF3866: Protein of unknown function (DUF3866); InterPro: IPR024479 This family of proteins is currently functionally uncharacterised.
Probab=62.52 E-value=16 Score=32.19 Aligned_cols=76 Identities=17% Similarity=0.202 Sum_probs=50.0
Q ss_pred cceeecchhhhhhhhhhhhhcccCCCCCCCCcCCCCCHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhH
Q psy18110 32 AMMSVDETLMCSFQILKTKYEQGLFSSPLVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYK 111 (249)
Q Consensus 32 ail~i~~~l~~~f~if~~~~~~~~~~~~~~igDiHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~ 111 (249)
.++.++|..++.-.+|+.. ..+...|++|+|+|..+..+...++... +..+++++ .-|.|.=++..-..+..||
T Consensus 66 ~Vl~vEEq~Sp~h~~~~~~--~sL~G~PVvV~~LHS~Lp~~~a~~k~~~--p~~riaYI--MtDggALP~~fS~~v~~Lk 139 (320)
T PF12982_consen 66 KVLSVEEQESPYHDLFRDA--DSLDGMPVVVAELHSMLPPIAAGLKALR--PDARIAYI--MTDGGALPLAFSRTVAELK 139 (320)
T ss_pred ceeeecccCCchHHHhhCc--CCCCCCEEEEEechhhHHHHHHHHHHhC--CCCeEEEE--EeCCcCccHHHHHHHHHHH
Confidence 4444455444433344332 2445579999999999999999888754 34444432 3577888888888888887
Q ss_pred hh
Q psy18110 112 IK 113 (249)
Q Consensus 112 ~~ 113 (249)
..
T Consensus 140 ~~ 141 (320)
T PF12982_consen 140 EK 141 (320)
T ss_pred hC
Confidence 54
No 139
>KOG2310|consensus
Probab=57.14 E-value=31 Score=32.86 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=29.2
Q ss_pred CHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHH
Q psy18110 68 QYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLL 107 (249)
Q Consensus 68 ~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l 107 (249)
.+.+|+.+|+.+.-...+.++.=||++.-..-|..+|-..
T Consensus 37 Sf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~ 76 (646)
T KOG2310|consen 37 SFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRC 76 (646)
T ss_pred hHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHH
Confidence 3678888888877666666777899998877776665433
No 140
>PF11372 DUF3173: Domain of unknown function (DUF3173); InterPro: IPR021512 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=51.24 E-value=4.3 Score=26.53 Aligned_cols=17 Identities=24% Similarity=0.767 Sum_probs=13.6
Q ss_pred CcccccccccCCceEEe
Q psy18110 1 VVEEGYEFFAKRQLVTL 17 (249)
Q Consensus 1 ~~~~G~~~~~~~~l~tv 17 (249)
||+.||.||-|++|-+|
T Consensus 30 lV~~G~~~Y~nkRlg~V 46 (59)
T PF11372_consen 30 LVQKGFSFYNNKRLGRV 46 (59)
T ss_pred HHHcCCCcccCCccCcc
Confidence 57899999998887554
No 141
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=51.16 E-value=65 Score=27.65 Aligned_cols=87 Identities=14% Similarity=0.120 Sum_probs=43.0
Q ss_pred CeEEEecccccCCCC------------------hHHHHHHHHHhHhh--CCCcEEEEcCCccccchhhhcC-cHHHHHHH
Q psy18110 85 SNYLFLGDYVDRGKQ------------------SLETICLLLAYKIK--YPENFFLLRGNHECASINRIYG-FYDECKRR 143 (249)
Q Consensus 85 ~~~vflGD~vdrG~~------------------s~~~l~~l~~l~~~--~~~~~~~l~GNHE~~~~~~~~~-~~~~~~~~ 143 (249)
.++|+.||.|+.-.+ ..+.++.+-.+-.+ ..-.|.++.||||-........ +...+..+
T Consensus 44 ~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~ 123 (257)
T cd07387 44 VRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHRCLFPK 123 (257)
T ss_pred EEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCHHHhhc
Confidence 368899999996432 12223333222222 1236999999999755433221 11111100
Q ss_pred hcHHHHHHHhHHhhcCcceEEecC-eEEEecCC
Q psy18110 144 FNIKLWKTFTECFNCLPVAAIVDE-KIFCCHGG 175 (249)
Q Consensus 144 ~~~~~~~~~~~~l~~lP~~~~i~~-~~l~vHgG 175 (249)
-. .+. .--+-+=|....+++ +++.+||-
T Consensus 124 s~--~~~--~~~~vtNP~~~~i~g~~vLgtsGq 152 (257)
T cd07387 124 SS--NYS--TLNLVTNPYEFSIDGVRVLGTSGQ 152 (257)
T ss_pred cc--ccC--CcEEeCCCeEEEECCEEEEEECCC
Confidence 00 000 001223366666766 68888885
No 142
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=48.53 E-value=28 Score=24.21 Aligned_cols=67 Identities=16% Similarity=0.067 Sum_probs=43.0
Q ss_pred CCCCCcCCCCCHHHHHHHHHhCCC--CCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCC
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYGGF--PPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN 124 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~~~--~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GN 124 (249)
.+.+|=|---|.+++.++++.+.. +....++.+|+.-|.|..+.+....+..+...+...+++...|
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~ 81 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDN 81 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSB
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCC
Confidence 355677766778888888776532 3445567799999988888776666666665555565544444
No 143
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=44.75 E-value=16 Score=35.28 Aligned_cols=22 Identities=23% Similarity=0.498 Sum_probs=18.6
Q ss_pred CCCCCcCCCCCHHHHHHHHHhC
Q psy18110 58 SPLVPGDIHGQYYDLLRLFEYG 79 (249)
Q Consensus 58 ~~~~igDiHG~~~~l~~ll~~~ 79 (249)
.-..+|||||.+++|..+|+.+
T Consensus 34 TEhF~SDlHGEyeAF~HiLrn~ 55 (640)
T PF06874_consen 34 TEHFMSDLHGEYEAFDHILRNG 55 (640)
T ss_pred ceEeeeccccchHHHHHHHHcC
Confidence 3468899999999999999864
No 144
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=43.71 E-value=40 Score=28.64 Aligned_cols=88 Identities=22% Similarity=0.277 Sum_probs=46.1
Q ss_pred CeEEEeccccc-CCC---ChHHHHHHHHHhHhh-------CCCcEEEEcCCccccchhhhcCcHHHHH-HHhcHHHHHHH
Q psy18110 85 SNYLFLGDYVD-RGK---QSLETICLLLAYKIK-------YPENFFLLRGNHECASINRIYGFYDECK-RRFNIKLWKTF 152 (249)
Q Consensus 85 ~~~vflGD~vd-rG~---~s~~~l~~l~~l~~~-------~~~~~~~l~GNHE~~~~~~~~~~~~~~~-~~~~~~~~~~~ 152 (249)
+-.+||||-.+ |=. ...-++.+|.++... -..+|+.|-||||..+-.. | ...+. .+.. ...-
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~ngn-y--~arlanhkls---~gDT 159 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFNGN-Y--MARLANHKLS---AGDT 159 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceeccCch-H--HHHHhhCCCC---ccch
Confidence 45889999763 311 123345555555432 2258999999999754210 0 01111 1111 1122
Q ss_pred hHHhhcCcceEEec-CeEEEecCCCCC
Q psy18110 153 TECFNCLPVAAIVD-EKIFCCHGGLSP 178 (249)
Q Consensus 153 ~~~l~~lP~~~~i~-~~~l~vHgGi~p 178 (249)
-..++.+|+.---. .+++..|-||-.
T Consensus 160 YnlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 160 YNLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred hhccccccccccCcchhhhhcccCcee
Confidence 23466677664422 268888888854
No 145
>KOG3425|consensus
Probab=43.38 E-value=1e+02 Score=23.31 Aligned_cols=60 Identities=20% Similarity=0.145 Sum_probs=39.1
Q ss_pred HHHHHHHHHhCCCCCCCeEEEecccccCCCCh-----HHHHHHHHHhHhhCCCcEEEE---cCCcccc
Q psy18110 69 YYDLLRLFEYGGFPPISNYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLL---RGNHECA 128 (249)
Q Consensus 69 ~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s-----~~~l~~l~~l~~~~~~~~~~l---~GNHE~~ 128 (249)
+++|++.++..+....-.++|+|+-.|++-+| ....-.+.+--..+|.++++| -||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 78899999987666555677899998987554 333333333222577776555 4776654
No 146
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=42.88 E-value=1e+02 Score=24.28 Aligned_cols=28 Identities=25% Similarity=0.425 Sum_probs=25.1
Q ss_pred CCeEEEecccccCCCChHHHHHHHHHhH
Q psy18110 84 ISNYLFLGDYVDRGKQSLETICLLLAYK 111 (249)
Q Consensus 84 ~~~~vflGD~vdrG~~s~~~l~~l~~l~ 111 (249)
.-++||+|=-+|+|.-+.++.++|..++
T Consensus 39 ~yD~i~lG~w~d~G~~d~~~~~fl~~l~ 66 (160)
T PF12641_consen 39 DYDLIFLGFWIDKGTPDKDMKEFLKKLK 66 (160)
T ss_pred CCCEEEEEcCccCCCCCHHHHHHHHHcc
Confidence 3579999999999999999999998874
No 147
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=42.06 E-value=39 Score=29.19 Aligned_cols=39 Identities=26% Similarity=0.453 Sum_probs=25.5
Q ss_pred eEEEecccccCCCChHHHH-HHHHHhHhhCCCcEEEEcCCcccc
Q psy18110 86 NYLFLGDYVDRGKQSLETI-CLLLAYKIKYPENFFLLRGNHECA 128 (249)
Q Consensus 86 ~~vflGD~vdrG~~s~~~l-~~l~~l~~~~~~~~~~l~GNHE~~ 128 (249)
+++|+||+|.+ ...+.+ ..|-+++.+++..++.. |=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 57999999955 333333 57788888777666544 55543
No 148
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=37.19 E-value=1.2e+02 Score=22.00 Aligned_cols=44 Identities=16% Similarity=0.429 Sum_probs=29.9
Q ss_pred HHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEE
Q psy18110 69 YYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 121 (249)
Q Consensus 69 ~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l 121 (249)
...+.++++. -|+.++|++||= |..-.|++.-+.. ++|+++.+|
T Consensus 52 ~~~i~~i~~~---fP~~kfiLIGDs---gq~DpeiY~~ia~---~~P~~i~ai 95 (100)
T PF09949_consen 52 RDNIERILRD---FPERKFILIGDS---GQHDPEIYAEIAR---RFPGRILAI 95 (100)
T ss_pred HHHHHHHHHH---CCCCcEEEEeeC---CCcCHHHHHHHHH---HCCCCEEEE
Confidence 3455555654 457889999995 6666787776543 488887655
No 149
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=36.74 E-value=38 Score=28.98 Aligned_cols=39 Identities=28% Similarity=0.374 Sum_probs=26.3
Q ss_pred eEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcCCccc
Q psy18110 86 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 127 (249)
Q Consensus 86 ~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~GNHE~ 127 (249)
+++|+||+|.+.-. ..+...|.+++.+++..++.. |=|.
T Consensus 1 ~ilfigdi~g~~G~-~~~~~~l~~lk~~~~~D~vi~--NgEn 39 (255)
T cd07382 1 KILFIGDIVGKPGR-KAVKEHLPKLKKEYKIDFVIA--NGEN 39 (255)
T ss_pred CEEEEEeCCCHHHH-HHHHHHHHHHHHHCCCCEEEE--CCcc
Confidence 47899999987432 244567788888777666554 4454
No 150
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=35.00 E-value=22 Score=33.18 Aligned_cols=20 Identities=25% Similarity=0.536 Sum_probs=17.7
Q ss_pred CCCcCCCCCHHHHHHHHHhC
Q psy18110 60 LVPGDIHGQYYDLLRLFEYG 79 (249)
Q Consensus 60 ~~igDiHG~~~~l~~ll~~~ 79 (249)
-.++|+||.|++|..+|+..
T Consensus 41 HF~SDvHGEYeaF~hVLrNg 60 (648)
T COG3855 41 HFMSDVHGEYEAFNHVLRNG 60 (648)
T ss_pred hhhhhhhchHHHHHHHHHcC
Confidence 46899999999999999863
No 151
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=31.92 E-value=81 Score=27.01 Aligned_cols=64 Identities=17% Similarity=0.070 Sum_probs=29.9
Q ss_pred CCCCCcCCCCC--HHHHHHHHHhCCCCCC-CeEEEecccccCCCC-hHHHHHHHHHhHhhCCCcEEEEcCCcc
Q psy18110 58 SPLVPGDIHGQ--YYDLLRLFEYGGFPPI-SNYLFLGDYVDRGKQ-SLETICLLLAYKIKYPENFFLLRGNHE 126 (249)
Q Consensus 58 ~~~~igDiHG~--~~~l~~ll~~~~~~~~-~~~vflGD~vdrG~~-s~~~l~~l~~l~~~~~~~~~~l~GNHE 126 (249)
+..+||||-|. ..++..-|..+...-. +.+|..|--...|.. ..+....+.+. +-=++-+|||-
T Consensus 2 riLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~-----G~dviT~GNH~ 69 (266)
T COG1692 2 RILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEA-----GADVITLGNHT 69 (266)
T ss_pred eEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHh-----CCCEEeccccc
Confidence 44566777665 3344444444322221 333345555444432 34445544443 22345667775
No 152
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=30.80 E-value=1.3e+02 Score=27.76 Aligned_cols=65 Identities=12% Similarity=0.018 Sum_probs=45.0
Q ss_pred CCCCCcCCCC-CHHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCC-CcEEEEcC
Q psy18110 58 SPLVPGDIHG-QYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYP-ENFFLLRG 123 (249)
Q Consensus 58 ~~~~igDiHG-~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~-~~~~~l~G 123 (249)
...+|=|-+. +.+++++.|+.+...+..+++.+||+...|+.+.+.-.-+-.+..... +.+++ -|
T Consensus 326 g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~-~G 392 (453)
T PRK10773 326 GQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLS-VG 392 (453)
T ss_pred CeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEE-EC
Confidence 3456778544 688888888876543445788899999999999888776655544333 44544 46
No 153
>PLN00084 photosystem II subunit S (PsbS); Provisional
Probab=30.42 E-value=30 Score=27.63 Aligned_cols=35 Identities=34% Similarity=0.477 Sum_probs=23.2
Q ss_pred ecccccCCCChHHHHHHHHHhH-------hhCCCcEEEEcCCc
Q psy18110 90 LGDYVDRGKQSLETICLLLAYK-------IKYPENFFLLRGNH 125 (249)
Q Consensus 90 lGD~vdrG~~s~~~l~~l~~l~-------~~~~~~~~~l~GNH 125 (249)
+||.+.||..++|-|.--.... ..+|.++.++. ||
T Consensus 9 vgdvvtrg~gp~eql~de~~~igahassvlfhpprftlv~-nh 50 (214)
T PLN00084 9 VGDVVTRGAGPLEQLRDEEMFIGAHASSVLFHPPRFTLVM-NH 50 (214)
T ss_pred hhhhhccCCCcHHHhhhhHHHhhhcccccccCCccchhhh-cc
Confidence 7999999999998776433332 23566655443 66
No 154
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=29.21 E-value=35 Score=23.28 Aligned_cols=22 Identities=23% Similarity=0.507 Sum_probs=19.3
Q ss_pred ccccCCCChHHHHHHHHHhHhh
Q psy18110 92 DYVDRGKQSLETICLLLAYKIK 113 (249)
Q Consensus 92 D~vdrG~~s~~~l~~l~~l~~~ 113 (249)
|++++|-+|+.++.++..++.+
T Consensus 23 NLi~~GLDSiR~M~L~~~wR~~ 44 (74)
T COG3433 23 NLIDYGLDSIRMMALLERWRKR 44 (74)
T ss_pred hHHHhchhHHHHHHHHHHHHHc
Confidence 6899999999999999888753
No 155
>KOG3770|consensus
Probab=25.91 E-value=1.8e+02 Score=28.12 Aligned_cols=69 Identities=22% Similarity=0.220 Sum_probs=40.7
Q ss_pred cCCCCC---HHHHHHHHHhCCCCC--CCeEEEeccccc--CCCChHH----HHHHHHHh-HhhCCC-cEEEEcCCccccc
Q psy18110 63 GDIHGQ---YYDLLRLFEYGGFPP--ISNYLFLGDYVD--RGKQSLE----TICLLLAY-KIKYPE-NFFLLRGNHECAS 129 (249)
Q Consensus 63 gDiHG~---~~~l~~ll~~~~~~~--~~~~vflGD~vd--rG~~s~~----~l~~l~~l-~~~~~~-~~~~l~GNHE~~~ 129 (249)
||--.| ...++.+|+.++-.. -|-++-.||++. +++...+ ++..+.++ ...+|+ .|+...||||-.-
T Consensus 185 G~y~~CD~P~~lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P 264 (577)
T KOG3770|consen 185 GDYGKCDSPKRLIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHP 264 (577)
T ss_pred CCcCCCCCCHHHHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCc
Confidence 666444 556667777655432 345666999984 4555432 33333222 233664 5999999999655
Q ss_pred hh
Q psy18110 130 IN 131 (249)
Q Consensus 130 ~~ 131 (249)
.+
T Consensus 265 ~N 266 (577)
T KOG3770|consen 265 VN 266 (577)
T ss_pred Hh
Confidence 44
No 156
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=24.16 E-value=78 Score=26.34 Aligned_cols=23 Identities=17% Similarity=0.288 Sum_probs=21.4
Q ss_pred ecCHHHHHHHHHHCCCcEEEecC
Q psy18110 226 TFGAEVVAKFLHKHDFDLICRAH 248 (249)
Q Consensus 226 ~fg~~~~~~fl~~~~~~~iirgH 248 (249)
.+|...+.+++++.+++.+|-||
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH 217 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGH 217 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECC
Confidence 67888999999999999999999
No 157
>PRK07308 flavodoxin; Validated
Probab=21.43 E-value=1e+02 Score=23.40 Aligned_cols=29 Identities=10% Similarity=0.060 Sum_probs=14.2
Q ss_pred CCCCCHHHHHHHHHhCCCCCCCeEEE-ecc
Q psy18110 64 DIHGQYYDLLRLFEYGGFPPISNYLF-LGD 92 (249)
Q Consensus 64 DiHG~~~~l~~ll~~~~~~~~~~~vf-lGD 92 (249)
++..+...+...|+...+....-.|| +||
T Consensus 63 ~~p~~~~~fl~~l~~~~l~~k~~~vfG~Gd 92 (146)
T PRK07308 63 ELPDEIVDFYEDLADLDLSGKIYGVVGSGD 92 (146)
T ss_pred CCCHHHHHHHHHHhcCCCCCCEEEEEeeCC
Confidence 44434444444444444443344555 787
No 158
>PF04263 TPK_catalytic: Thiamin pyrophosphokinase, catalytic domain; InterPro: IPR007371 Thiamin pyrophosphokinase (TPK, 2.7.6.2 from EC) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamin) to form the coenzyme thiamin pyrophosphate (TPP). Thus, TPK is important for the formation of a coenzyme required for central metabolic functions. The structure of thiamin pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis [].; GO: 0004788 thiamine diphosphokinase activity, 0005524 ATP binding, 0009229 thiamine diphosphate biosynthetic process; PDB: 2F17_B 1IG3_B 3S4Y_B 2OMK_B 1IG0_A 3MEL_B 3CQ9_A 3LM8_B 3K94_B 3L8M_B ....
Probab=20.74 E-value=1e+02 Score=23.15 Aligned_cols=38 Identities=26% Similarity=0.344 Sum_probs=24.4
Q ss_pred CCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEE
Q psy18110 83 PISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 121 (249)
Q Consensus 83 ~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l 121 (249)
+.+.++.+|-.=.|-.+.+..+.++..++ +...+++++
T Consensus 84 ~~~~i~v~Ga~GgR~DH~lanl~~l~~~~-~~~~~i~li 121 (123)
T PF04263_consen 84 GPDEIIVLGALGGRFDHTLANLNLLYKYK-KRGIKIVLI 121 (123)
T ss_dssp TTSEEEEES-SSSSHHHHHHHHHHHHHHH-TTTSEEEEE
T ss_pred CCCEEEEEecCCCcHHHHHHHHHHHHHHH-HcCCeEEEE
Confidence 34567778888778778888888777765 223345443
No 159
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=20.64 E-value=3.6e+02 Score=20.38 Aligned_cols=52 Identities=12% Similarity=0.024 Sum_probs=32.3
Q ss_pred HHHHHHHHHhCCCCCCCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEEcC
Q psy18110 69 YYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 123 (249)
Q Consensus 69 ~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l~G 123 (249)
.+.|.+++...|..+.+.+|+-++-=.+|..+..+..++..+. -.++.++-|
T Consensus 80 ~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G---~~~v~ildG 131 (138)
T cd01445 80 EAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCG---HPDVAILDG 131 (138)
T ss_pred HHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcC---CCCeEEeCC
Confidence 4689999999999988888886542113444555544443332 135666655
No 160
>PRK10997 yieM hypothetical protein; Provisional
Probab=20.24 E-value=3.5e+02 Score=25.62 Aligned_cols=43 Identities=9% Similarity=0.161 Sum_probs=30.2
Q ss_pred CCeEEEecccccCCCChHHHHHHHHHhHhhCCCcEEEE-cCCccc
Q psy18110 84 ISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL-RGNHEC 127 (249)
Q Consensus 84 ~~~~vflGD~vdrG~~s~~~l~~l~~l~~~~~~~~~~l-~GNHE~ 127 (249)
...+|++.|+++.+. +.+++..+..++.....+++.| .|+|..
T Consensus 417 ~adIVVISDF~~~~~-~eel~~~L~~Lk~~~~~rf~~l~i~~~~~ 460 (487)
T PRK10997 417 DADAVVISDFIAQRL-PDELVAKVKELQRQHQHRFHAVAMSAHGK 460 (487)
T ss_pred CceEEEECCCCCCCC-hHHHHHHHHHHHHhcCcEEEEEEeCCCCC
Confidence 456889999987654 5677788888877666666654 455554
Done!