RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy18110
(249 letters)
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A
subunit) {Human (Homo sapiens) [TaxId: 9606]}
Length = 473
Score = 256 bits (656), Expect = 4e-84
Identities = 82/194 (42%), Positives = 124/194 (63%), Gaps = 7/194 (3%)
Query: 63 GDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122
GDIHGQ++DL++LFE GG P + YLFLGDYVDRG S+E + L A KI YP+ FLLR
Sbjct: 76 GDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLR 135
Query: 123 GNHECASINRIYGFYDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQS 182
GNHEC + + F ECK +++ +++ + F+CLP+AA+++++ C HGGLSP++ +
Sbjct: 136 GNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINT 195
Query: 183 MEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGEND-------RGVSFTFGAEVVAKF 235
++ IR++ R + P G +CD+LWSDP +D + RG S+ + V +F
Sbjct: 196 LDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEF 255
Query: 236 LHKHDFDLICRAHQ 249
L ++ I RAH+
Sbjct: 256 LQHNNLLSILRAHE 269
Score = 63.1 bits (153), Expect = 3e-12
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 1 VVEEGYEFFAKRQ------LVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 45
+ GY + K Q L+T+FSAPNY ++N A++ + +M Q
Sbjct: 270 AQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQ 320
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo
sapiens), beta isoform [TaxId: 9606]}
Length = 294
Score = 244 bits (625), Expect = 9e-82
Identities = 180/190 (94%), Positives = 185/190 (97%)
Query: 60 LVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF 119
+ GDIHGQYYDLLRLFEYGGFPP SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF
Sbjct: 55 KICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF 114
Query: 120 LLRGNHECASINRIYGFYDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPD 179
LLRGNHECASINRIYGFYDECKRR+NIKLWKTFT+CFNCLP+AAIVDEKIFCCHGGLSPD
Sbjct: 115 LLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPD 174
Query: 180 LQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKH 239
LQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKD +GWGENDRGVSFTFGAEVVAKFLHKH
Sbjct: 175 LQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKH 234
Query: 240 DFDLICRAHQ 249
D DLICRAHQ
Sbjct: 235 DLDLICRAHQ 244
Score = 80.8 bits (199), Expect = 1e-18
Identities = 47/48 (97%), Positives = 48/48 (100%)
Query: 1 VVEEGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILK 48
VVE+GYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILK
Sbjct: 245 VVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILK 292
>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5
{Human (Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 229 bits (586), Expect = 2e-75
Identities = 87/191 (45%), Positives = 123/191 (64%), Gaps = 3/191 (1%)
Query: 61 VPGDIHGQYYDLLRLFEYGGFPPISN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFF 119
V GD HGQ+YDLL +FE G P +N Y+F GD+VDRG S+E I L +K+ YP++F
Sbjct: 64 VCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFH 123
Query: 120 LLRGNHECASINRIYGFYDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGL-SP 178
LLRGNHE ++N+IYGF E K ++ ++++ F+E F LP+A ++ K+ HGGL S
Sbjct: 124 LLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSE 183
Query: 179 DLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHK 238
D +++ IR+I R PD G +CDLLWSDP G + RGVS FG +V FL +
Sbjct: 184 DGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQN-GRSISKRGVSCQFGPDVTKAFLEE 242
Query: 239 HDFDLICRAHQ 249
++ D I R+H+
Sbjct: 243 NNLDYIIRSHE 253
Score = 70.4 bits (172), Expect = 7e-15
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 1 VVEEGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVD-ETLMCSFQILK 48
V EGYE + VT+FSAPNYC + N + + + L F
Sbjct: 254 VKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFT 302
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic
subunit alpha isoform, PP2A-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 288
Score = 224 bits (572), Expect = 9e-74
Identities = 98/191 (51%), Positives = 134/191 (70%), Gaps = 2/191 (1%)
Query: 60 LVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF 119
V GD+HGQ++DL+ LF GG P +NYLF+GDYVDRG S+ET+ LL+A K++Y E
Sbjct: 48 TVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERIT 107
Query: 120 LLRGNHECASINRIYGFYDECKRRF-NIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSP 178
+LRGNHE I ++YGFYDEC R++ N +WK FT+ F+ LP+ A+VD +IFC HGGLSP
Sbjct: 108 ILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSP 167
Query: 179 DLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHK 238
+ +++ IR + R +VP +G +CDLLWSDPD GWG + RG +TFG ++ F H
Sbjct: 168 SIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRG-GWGISPRGAGYTFGQDISETFNHA 226
Query: 239 HDFDLICRAHQ 249
+ L+ RAHQ
Sbjct: 227 NGLTLVSRAHQ 237
Score = 75.8 bits (186), Expect = 7e-17
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 1 VVEEGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILK 48
+V EGY + R +VT+FSAPNYC N A+M +D+TL SF
Sbjct: 238 LVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFD 285
>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase
{Bacteriophage lambda [TaxId: 10710]}
Length = 219
Score = 68.0 bits (165), Expect = 2e-14
Identities = 33/135 (24%), Positives = 51/135 (37%), Gaps = 22/135 (16%)
Query: 63 GDIHGQYYDLLRLFEYGGFPPISN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 121
GD+HG Y +L+ + GF + + +GD VDRG +++E + L F +
Sbjct: 19 GDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLEL------ITFPWFRAV 72
Query: 122 RGNHECASINRIYGFYDECKRRFNIKLW------------KTFTECFNCLPVA---AIVD 166
RGNHE I+ + + N W K + LP+ D
Sbjct: 73 RGNHEQMMIDGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKD 132
Query: 167 EKIFCCHGGLSPDLQ 181
+K CH D
Sbjct: 133 KKYVICHADYPFDEY 147
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 251
Score = 60.5 bits (145), Expect = 1e-11
Identities = 19/134 (14%), Positives = 33/134 (24%), Gaps = 24/134 (17%)
Query: 63 GDIHGQYYDLLRLFEY-----GGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPEN 117
+I G L I Y LG+ V E I ++ + EN
Sbjct: 7 ANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVI--KDLTKKEN 64
Query: 118 FFLLRGNHECASINRIYGFYDECK-----------------RRFNIKLWKTFTECFNCLP 160
++RG ++ D + +
Sbjct: 65 VKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYL 124
Query: 161 VAAIVDEKIFCCHG 174
V I ++F +G
Sbjct: 125 VDKIGGNEVFGVYG 138
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 49.2 bits (116), Expect = 6e-08
Identities = 16/124 (12%), Positives = 35/124 (28%), Gaps = 8/124 (6%)
Query: 60 LVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICL----LLAYKIKYP 115
+ DIHG R+ E + LGD ++ G ++ ++ +
Sbjct: 5 MFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA 64
Query: 116 ENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTECFNCLP----VAAIVDEKIFC 171
+RGN + + F + + + L + A+ +
Sbjct: 65 HKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPALNQNDVLV 124
Query: 172 CHGG 175
Sbjct: 125 YGHT 128
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus
thermophilus [TaxId: 274]}
Length = 228
Score = 42.0 bits (97), Expect = 2e-05
Identities = 15/189 (7%), Positives = 38/189 (20%), Gaps = 9/189 (4%)
Query: 60 LVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF 119
L + G L + + +G+ + + +S + +
Sbjct: 9 LATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILS-EAHLPTA 67
Query: 120 LLRGNHECASINRIYGFYDECKRRFNIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPD 179
+ G + + + ++ T F P G
Sbjct: 68 YVPGPQDAPIWEYLREAANVELVHPEMR-NVHETFTFWRGPYLVAGVGGEIADEGEPEEH 126
Query: 180 LQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKH 239
+ ++ + VA + H
Sbjct: 127 EALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGLNEQG-------SHEVAHLIKTH 179
Query: 240 DFDLICRAH 248
+ L+ A
Sbjct: 180 NPLLVLVAG 188
>d2q07a3 d.17.6.5 (A:394-459) Uncharacterized protein AF0587
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 66
Score = 25.7 bits (56), Expect = 1.5
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 113 KYPENFFLLRGNHECASINRIYGFYD 138
+YPE LL G A ++RIYG D
Sbjct: 28 RYPE-LELLEGKKRLARVDRIYGMLD 52
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936
{Methanococcus jannaschii [TaxId: 2190]}
Length = 165
Score = 27.1 bits (59), Expect = 1.7
Identities = 10/85 (11%), Positives = 21/85 (24%), Gaps = 9/85 (10%)
Query: 60 LVPGDIHGQYYDLLRLFEYGGFPPISNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF 119
+ D H ++ + E + + GD+V + N
Sbjct: 4 GIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSLFV---------IKEFENLNANII 54
Query: 120 LLRGNHECASINRIYGFYDECKRRF 144
GN++ D +
Sbjct: 55 ATYGNNDGERCKLKEWLKDINEENI 79
>d1bsma2 d.44.1.1 (A:87-201) Cambialistic superoxide dismutase
{Propionibacterium shermanii [TaxId: 1752]}
Length = 115
Score = 25.7 bits (56), Expect = 3.0
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 128 ASINRIYGFYDECKRRFNIKLWKTFTECFNCL 159
A+I+ +G +D K +F + L
Sbjct: 12 AAIDEFFGSFDNMKAQFTAAATGIQGSGWASL 43
>d1a77a1 a.60.7.1 (A:209-316) Flap endonuclease-1 (Fen-1 nuclease)
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 108
Score = 25.6 bits (56), Expect = 3.1
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Query: 160 PVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKD 212
A + L +++ ++I+RI + V D L PDK+
Sbjct: 27 FKRAYELVRSGVAKDVLKKEVEYYDEIKRIFKEPKVTDN---YSLSLKLPDKE 76
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId:
2261]}
Length = 333
Score = 25.8 bits (55), Expect = 4.9
Identities = 20/164 (12%), Positives = 42/164 (25%), Gaps = 5/164 (3%)
Query: 88 LFLGDYVDRGKQSLETICLLLAYKIKYPEN---FFLLRGNHECASINRIYGFYDECKRRF 144
L GD + S T+ +A E+ F + GNH+ R + +
Sbjct: 45 LIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHDRTQ--RGPSVLNLLEDFG 102
Query: 145 NIKLWKTFTECFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDL 204
+ + E + + G+ DL+ + + L
Sbjct: 103 LVYVIGMRKEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEILKRLF 162
Query: 205 LWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHDFDLICRAH 248
+D + G + + + + H
Sbjct: 163 RPTDNAILMLHQGVREVSEARGEDYFEIGLGDLPEGYLYYALGH 206
>d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 293
Score = 25.5 bits (55), Expect = 7.6
Identities = 3/16 (18%), Positives = 6/16 (37%)
Query: 68 QYYDLLRLFEYGGFPP 83
+ L + + G P
Sbjct: 241 SFRPYLEIAKAGKLKP 256
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.326 0.144 0.466
Gapped
Lambda K H
0.267 0.0556 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,019,144
Number of extensions: 48442
Number of successful extensions: 169
Number of sequences better than 10.0: 1
Number of HSP's gapped: 159
Number of HSP's successfully gapped: 22
Length of query: 249
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 166
Effective length of database: 1,268,006
Effective search space: 210488996
Effective search space used: 210488996
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.2 bits)