BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18111
(186 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 188 bits (477), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 123/173 (71%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D VLL+ ++E+ FI NL +R+K D+IYTYIG+V+++ NP+K LNIY +AY R
Sbjct: 9 GVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYKESDIKAYNGR 68
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGPV 131
+++PPH++A+A AYR +R E+QC+I+SGESG+GKT+A+ ++ F+ + P
Sbjct: 69 YKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSPN 128
Query: 132 LNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHITN 184
+ + L PLLEAFGNA+TL+NDNSSRFGKY++++F+ G P+G ITN
Sbjct: 129 GERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITN 181
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 187 bits (476), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 123/173 (71%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D VLL+ ++E+ FI NL +R+K D+IYTYIG+V+++ NP+K LNIY +AY R
Sbjct: 9 GVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYKESDIKAYNGR 68
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGPV 131
+++PPH++A+A AYR +R E+QC+I+SGESG+GKT+A+ ++ F+ + P
Sbjct: 69 YKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSPN 128
Query: 132 LNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHITN 184
+ + L PLLEAFGNA+TL+NDNSSRFGKY++++F+ G P+G ITN
Sbjct: 129 GERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITN 181
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 144 bits (363), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 4 PLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPL-NIYSA 62
P DS+ D L L+E T + N+ +RY +D IYTY+ N+L+ VNPY + IYS+
Sbjct: 59 PAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSS 118
Query: 63 ELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122
E ++Y+ + +PPH+FAIA A+R ++ Q IIVSGESG+GKT+ V+ ++
Sbjct: 119 ETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT 178
Query: 123 CATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
+ GTG + +++ PLLEAFGNA+T++N+NSSRFGK+++I F+ K +G +
Sbjct: 179 -ESYGTG---QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 234
Query: 183 TN 184
++
Sbjct: 235 SH 236
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 144 bits (363), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 4 PLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPL-NIYSA 62
P DS+ D L L+E T + N+ +RY +D IYTY+ N+L+ VNPY + IYS+
Sbjct: 59 PAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSS 118
Query: 63 ELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122
E ++Y+ + +PPH+FAIA A+R ++ Q IIVSGESG+GKT+ V+ ++
Sbjct: 119 ETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT 178
Query: 123 CATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
+ GTG + +++ PLLEAFGNA+T++N+NSSRFGK+++I F+ K +G +
Sbjct: 179 -ESYGTG---QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 234
Query: 183 TN 184
++
Sbjct: 235 SH 236
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 144 bits (362), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 4 PLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPL-NIYSA 62
P DS+ D L L+E T + N+ +RY +D IYTY+ N+L+ VNPY + IYS+
Sbjct: 46 PAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSS 105
Query: 63 ELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122
E ++Y+ + +PPH+FAIA A+R ++ Q IIVSGESG+GKT+ V+ ++
Sbjct: 106 ETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT 165
Query: 123 CATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
+ GTG + +++ PLLEAFGNA+T++N+NSSRFGK+++I F+ K +G +
Sbjct: 166 -ESYGTG---QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 221
Query: 183 TN 184
++
Sbjct: 222 SH 223
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 144 bits (362), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 4 PLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPL-NIYSA 62
P DS+ D L L+E T + N+ +RY +D IYTY+ N+L+ VNPY + IYS+
Sbjct: 49 PAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSS 108
Query: 63 ELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122
E ++Y+ + +PPH+FAIA A+R ++ Q IIVSGESG+GKT+ V+ ++
Sbjct: 109 ETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT 168
Query: 123 CATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
+ GTG + +++ PLLEAFGNA+T++N+NSSRFGK+++I F+ K +G +
Sbjct: 169 -ESYGTG---QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 224
Query: 183 TN 184
++
Sbjct: 225 SH 226
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 4 PLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPL-NIYSA 62
P DS+ D L L+E T + N+ +RY +D IYTY+ N+L+ VNPY + IYS+
Sbjct: 50 PAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSS 109
Query: 63 ELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122
E ++Y+ + +PPH+FAIA A+R ++ Q IIVSGESG+GKT+ V+ ++
Sbjct: 110 ETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT 169
Query: 123 CATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
+ GTG + +++ PLLEAFGNA+T++N+NSSRFGK+++I F+ K +G +
Sbjct: 170 -ESYGTG---QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 225
Query: 183 TN 184
++
Sbjct: 226 SH 227
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 4 PLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPL-NIYSA 62
P DS+ D L L+E T + N+ +RY +D IYTY+ N+L+ VNPY + IYS+
Sbjct: 47 PAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSS 106
Query: 63 ELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122
E ++Y+ + +PPH+FAIA A+R ++ Q IIVSGESG+GKT+ V+ ++
Sbjct: 107 ETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT 166
Query: 123 CATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
+ GTG + +++ PLLEAFGNA+T++N+NSSRFGK+++I F+ K +G +
Sbjct: 167 -ESYGTG---QDIYDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 222
Query: 183 TN 184
++
Sbjct: 223 SH 224
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 4 PLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPL-NIYSA 62
P DS+ D L L+E T + N+ +RY +D IYTY+ N+L+ VNPY + IYS+
Sbjct: 49 PAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSS 108
Query: 63 ELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122
E ++Y+ + +PPH+FAIA A+R ++ Q IIVSGESG+GKT+ V+ ++
Sbjct: 109 ETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT 168
Query: 123 CATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
+ GTG + +++ PLLEAFGNA+T++N+NSSRFGK+++I F+ K +G +
Sbjct: 169 -ESYGTG---QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 224
Query: 183 TN 184
++
Sbjct: 225 SH 226
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 4 PLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPL-NIYSA 62
P DS+ D L L+E T + N+ +RY +D IYTY+ N+L+ VNPY + IYS+
Sbjct: 50 PAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSS 109
Query: 63 ELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122
E ++Y+ + +PPH+FAIA A+R ++ Q IIVSGESG+GKT+ V+ ++
Sbjct: 110 ETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT 169
Query: 123 CATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
+ GTG + +++ PLLEAFGNA+T++N+NSSRFGK+++I F+ K +G +
Sbjct: 170 -ESYGTG---QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 225
Query: 183 TN 184
++
Sbjct: 226 SH 227
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 4 PLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPL-NIYSA 62
P DS+ D L L+E T + N+ +RY +D IYTY+ N+L+ VNPY + IYS+
Sbjct: 49 PAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSS 108
Query: 63 ELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122
E ++Y+ + +PPH+FAIA A+R ++ Q IIVSGESG+GKT+ V+ ++
Sbjct: 109 ETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT 168
Query: 123 CATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
+ GTG + +++ PLLEAFGNA+T++N+NSSRFGK+++I F+ K +G +
Sbjct: 169 -ESYGTG---QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 224
Query: 183 TN 184
++
Sbjct: 225 SH 226
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 4 PLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPL-NIYSA 62
P DS+ D L L+E T + N+ +RY +D IYTY+ N+L+ VNPY + IYS+
Sbjct: 49 PAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSS 108
Query: 63 ELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122
E ++Y+ + +PPH+FAIA A+R ++ Q IIVSGESG+GKT+ V+ ++
Sbjct: 109 ETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT 168
Query: 123 CATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
+ GTG + +++ PLLEAFGNA+T++N+NSSRFGK+++I F+ K +G +
Sbjct: 169 -ESYGTG---QDIYDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 224
Query: 183 TN 184
++
Sbjct: 225 SH 226
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 4 PLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPL-NIYSA 62
P DS+ D L L+E T + N+ +RY +D IYTY+ N+L+ VNPY + IYS+
Sbjct: 50 PAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSS 109
Query: 63 ELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122
E ++Y+ + +PPH+FAIA A+R ++ Q IIVSGESG+GKT+ V+ ++
Sbjct: 110 ETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT 169
Query: 123 CATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
+ GTG + +++ PLLEAFGNA+T++N+NSSRFGK+++I F+ K +G +
Sbjct: 170 -ESYGTG---QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 225
Query: 183 TN 184
++
Sbjct: 226 SH 227
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 4 PLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPL-NIYSA 62
P DS+ D L L+E T + N+ +RY +D IYTY+ N+L+ VNPY + IYS+
Sbjct: 49 PAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSS 108
Query: 63 ELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122
E ++Y+ + +PPH+FAIA A+R ++ Q IIVSGESG+GKT+ V+ ++
Sbjct: 109 ETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT 168
Query: 123 CATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
+ GTG + +++ PLLEAFGNA+T++N+NSSRFGK+++I F+ K +G +
Sbjct: 169 -ESYGTG---QDIYDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 224
Query: 183 TN 184
++
Sbjct: 225 SH 226
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 142 bits (359), Expect = 9e-35, Method: Composition-based stats.
Identities = 79/194 (40%), Positives = 110/194 (56%), Gaps = 16/194 (8%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D L L+E + + NL RY IYTY G V +NPYK L IY
Sbjct: 77 MNPPKFSKVE----DMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIY 132
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
S ++ Y+ + ++PPHI+AIA +AYR + EDQ I+ +GESG+GKT+ V+ +
Sbjct: 133 SEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQY 192
Query: 121 IACA------------TPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLD 168
+A T G + ++L P+LEAFGNA+T+KNDNSSRFGK++
Sbjct: 193 LAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIR 252
Query: 169 IEFDYKGDPLGAHI 182
I FD G +GA+I
Sbjct: 253 INFDVTGYIVGANI 266
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 111/194 (57%), Gaps = 16/194 (8%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D L L+E + + NL RY IYTY G V +NPYK L IY
Sbjct: 77 MNPPKFSKVE----DMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIY 132
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
S ++ Y+ + ++PPHI+AIA +AYR + EDQ I+ +GESG+GKT+ V+ +
Sbjct: 133 SEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQY 192
Query: 121 IACATPG----------TGPVLN--AVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLD 168
+A GP + + ++L P+LEAFGNA+T+KNDNSSRFGK++
Sbjct: 193 LAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIR 252
Query: 169 IEFDYKGDPLGAHI 182
I FD G +GA+I
Sbjct: 253 INFDVTGYIVGANI 266
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 111/194 (57%), Gaps = 16/194 (8%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D L L+E + + NL RY IYTY G V +NPYK L IY
Sbjct: 77 MNPPKFSKVE----DMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIY 132
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
S ++ Y+ + ++PPHI+AIA +AYR + EDQ I+ +GESG+GKT+ V+ +
Sbjct: 133 SEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQY 192
Query: 121 IACATPG----------TGPVLN--AVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLD 168
+A GP + + ++L P+LEAFGNA+T+KNDNSSRFGK++
Sbjct: 193 LAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIR 252
Query: 169 IEFDYKGDPLGAHI 182
I FD G +GA+I
Sbjct: 253 INFDVTGYIVGANI 266
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 111/194 (57%), Gaps = 16/194 (8%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D L L+E + + NL RY IYTY G V +NPYK L IY
Sbjct: 77 MNPPKFSKVE----DMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIY 132
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
S ++ Y+ + ++PPHI+AIA +AYR + EDQ I+ +GESG+GKT+ V+ +
Sbjct: 133 SEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQY 192
Query: 121 IACATPG----------TGPVLN--AVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLD 168
+A GP + + ++L P+LEAFGNA+T+KNDNSSRFGK++
Sbjct: 193 LAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIR 252
Query: 169 IEFDYKGDPLGAHI 182
I FD G +GA+I
Sbjct: 253 INFDVTGYIVGANI 266
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 110/194 (56%), Gaps = 16/194 (8%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D L L+E + + NL RY IYTY G V +NPYK L IY
Sbjct: 77 MNPPKFSKVE----DMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIY 132
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
S ++ Y+ + ++PPHI+AIA +AYR + EDQ I+ +GESG+GKT+ V+ +
Sbjct: 133 SEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQY 192
Query: 121 IACA------------TPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLD 168
+A T G + ++L P+LEAFGNA+T+KNDNSSRFGK++
Sbjct: 193 LAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIR 252
Query: 169 IEFDYKGDPLGAHI 182
I FD G +GA+I
Sbjct: 253 INFDVTGYIVGANI 266
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 110/194 (56%), Gaps = 16/194 (8%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D L L+E + + NL RY IYTY G V +NPYK L IY
Sbjct: 77 MNPPKFSKVE----DMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIY 132
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
S ++ Y+ + ++PPHI+AIA +AYR + EDQ I+ +GESG+GKT+ V+ +
Sbjct: 133 SEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQY 192
Query: 121 IACA------------TPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLD 168
+A T G + ++L P+LEAFGNA+T+KNDNSSRFGK++
Sbjct: 193 LAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIR 252
Query: 169 IEFDYKGDPLGAHI 182
I FD G +GA+I
Sbjct: 253 INFDVTGYIVGANI 266
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 109/187 (58%), Gaps = 9/187 (4%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP +E D L L+E + + NL RY IYTY G V +NPYK L IY
Sbjct: 54 MNPPKFSKAE----DMAELTCLNEASVLHNLRERYYSGLIYTYSGLFCVVINPYKQLPIY 109
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
+ + YR + ++PPH++A+ AYR + EDQ I+ +GESG+GKT+ V+ +
Sbjct: 110 TEAIVEMYRGKKRHEVPPHVYAVTEGAYRSMLQDREDQSILCTGESGAGKTENTKKVIQY 169
Query: 121 IA-CATPGTGP----VLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKG 175
+A A+ G V + +L P+LEAFGNA+T+KNDNSSRFGK++ I FD G
Sbjct: 170 LAHVASSPKGRKEPGVPGELERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAG 229
Query: 176 DPLGAHI 182
+GA+I
Sbjct: 230 YIVGANI 236
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 136 bits (343), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 145
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 146 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 205
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 206 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 257
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 136 bits (342), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 145
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 146 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 205
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 206 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 257
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 136 bits (342), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 145
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 146 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 205
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 206 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 257
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 136 bits (342), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 157
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 158 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 217
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 218 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 269
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 258
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASI 258
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 157
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 158 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 217
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 218 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 269
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 258
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASI 258
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 258
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASI 258
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASI 258
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASI 258
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 258
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASI 258
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 258
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASI 258
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 145
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 146 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 205
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 206 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 257
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 135 bits (341), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 157
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 158 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 217
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 218 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 269
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 135 bits (341), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 157
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 158 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 217
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 218 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 269
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIPIYTQEMVDIFKGR 145
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 146 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 205
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 206 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 257
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIPIYTQEMVDIFKGR 145
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 146 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 205
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSSRFGK+++I+F+ G GA I
Sbjct: 206 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 257
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+N+SRFGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNASRFGKFIEIQFNSAGFISGASI 258
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 107/176 (60%), Gaps = 9/176 (5%)
Query: 12 GAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTR 71
G D L L+E NL +RY +D IYTY G LV VNP+K + IY+ E+ ++ R
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGR 146
Query: 72 GPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACA-----TP 126
++ PHIFAI+ AYR + D ++Q ++++GESG+GKT+ V+ ++A
Sbjct: 147 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQAN 206
Query: 127 GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
G+G + +++ P+LEAFGNA+T +N+NSS FGK+++I+F+ G GA I
Sbjct: 207 GSG----VLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASI 258
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D ++ L E + NL RY IYTY G VTVNPYK L +Y
Sbjct: 77 MNPPKYDKIE----DMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLPVY 132
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVV-Y 119
+ ++ AYR + + PPHIF+I+ +AY+++ E+Q I+++GESG+GKT V+ Y
Sbjct: 133 NPKVVLAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQY 192
Query: 120 FIACATPG-------TGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFD 172
F A G +G + + +++ PLLEAFGNA+T++NDNSSRFGK++ I F
Sbjct: 193 FATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFG 252
Query: 173 YKGDPLGAHI 182
G A I
Sbjct: 253 ATGKLASADI 262
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 129 bits (325), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 101/175 (57%), Gaps = 7/175 (4%)
Query: 15 DCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTRGPF 74
D +L L E + NL RY IYTY G VTVNPYK L +Y+ E+ AYR +
Sbjct: 89 DMAMLTFLHEPAVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLPVYTPEVVAAYRGKKRS 148
Query: 75 QLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVV-YFIACATPG------ 127
+ PPHIF+I+ +AY+++ E+Q I+++GESG+GKT V+ YF A G
Sbjct: 149 EAPPHIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKD 208
Query: 128 TGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAHI 182
P + +++ P LEAFGNA+T++NDNSSRFGK++ I F G A I
Sbjct: 209 QSPGKGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADI 263
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 127 bits (320), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 107/182 (58%), Gaps = 4/182 (2%)
Query: 3 PPLVV-DSETGAWDCVLLDPLSEDTFISNLHLRY-KRDHIYTYIGNVLVTVNPYKPLNIY 60
PPL D G D L L E + NL +R+ IYTY G VLV +NPY+ L IY
Sbjct: 60 PPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIY 119
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
++ AY + + PHIFA+A AY+ + +Q IIVSGESG+GKT +A + +
Sbjct: 120 GEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRY 179
Query: 121 IACATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGA 180
A + G+ N V EK+ P++E+ GNA+T +NDNSSRFGKY++I FD + +GA
Sbjct: 180 FATVS-GSASEAN-VEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGA 237
Query: 181 HI 182
++
Sbjct: 238 NM 239
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 127 bits (320), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 107/182 (58%), Gaps = 4/182 (2%)
Query: 3 PPLVV-DSETGAWDCVLLDPLSEDTFISNLHLRY-KRDHIYTYIGNVLVTVNPYKPLNIY 60
PPL D G D L L E + NL +R+ IYTY G VLV +NPY+ L IY
Sbjct: 60 PPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIY 119
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
++ AY + + PHIFA+A AY+ + +Q IIVSGESG+GKT +A + +
Sbjct: 120 GEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRY 179
Query: 121 IACATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGA 180
A + G+ N V EK+ P++E+ GNA+T +NDNSSRFGKY++I FD + +GA
Sbjct: 180 FATVS-GSASEAN-VEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGA 237
Query: 181 HI 182
++
Sbjct: 238 NM 239
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 127 bits (320), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 107/182 (58%), Gaps = 4/182 (2%)
Query: 3 PPLVV-DSETGAWDCVLLDPLSEDTFISNLHLRY-KRDHIYTYIGNVLVTVNPYKPLNIY 60
PPL D G D L L E + NL +R+ IYTY G VLV +NPY+ L IY
Sbjct: 60 PPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIY 119
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
++ AY + + PHIFA+A AY+ + +Q IIVSGESG+GKT +A + +
Sbjct: 120 GEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRY 179
Query: 121 IACATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGA 180
A + G+ N V EK+ P++E+ GNA+T +NDNSSRFGKY++I FD + +GA
Sbjct: 180 FATVS-GSASEAN-VEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGA 237
Query: 181 HI 182
++
Sbjct: 238 NM 239
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 105/190 (55%), Gaps = 12/190 (6%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D ++ L E + NL RY IYTY G VTVNPY L +Y
Sbjct: 80 MNPPXYDXIE----DMAMMTHLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLPVY 135
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVV-Y 119
+ + AYR + + PPHIF+I+ +AY+++ E+Q I+++GESG+GKT V+ Y
Sbjct: 136 NPXVVLAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQY 195
Query: 120 FIACATPG-------TGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFD 172
F A G +G + + +++ PLLEAFGNA T++NDNSSRFG ++ I F
Sbjct: 196 FATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFG 255
Query: 173 YKGDPLGAHI 182
G A I
Sbjct: 256 ATGKLASADI 265
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 105/190 (55%), Gaps = 12/190 (6%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D ++ L E + NL RY IYTY G VTVNPY L +Y
Sbjct: 77 MNPPXYDXIE----DMAMMTHLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLPVY 132
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVV-Y 119
+ + AYR + + PPHIF+I+ +AY+++ E+Q I+++GESG+GKT V+ Y
Sbjct: 133 NPXVVLAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQY 192
Query: 120 FIACATPG-------TGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFD 172
F A G +G + + +++ PLLEAFGNA T++NDNSSRFG ++ I F
Sbjct: 193 FATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFG 252
Query: 173 YKGDPLGAHI 182
G A I
Sbjct: 253 ATGKLASADI 262
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 13/181 (7%)
Query: 15 DCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTRGPF 74
D L L+E + + NL RY+ IYTY G + +NPY+ L IY+ L YR +
Sbjct: 87 DMANLTFLNEASILHNLRSRYESGFIYTYSGLFCIAINPYRRLPIYTQGLVDKYRGKRRA 146
Query: 75 QLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVV-YFIACATPGTG---- 129
++PPH+F+IA +AY+++ E+Q ++++GESG+GKT+ V+ YF A G
Sbjct: 147 EMPPHLFSIADNAYQYMLQDRENQSMLITGESGAGKTENTKKVIQYFALVAASLAGKKDK 206
Query: 130 --------PVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFDYKGDPLGAH 181
+ +++ P+LEA+GNA+T +N+NSSRFGK++ I F +G GA
Sbjct: 207 KEEEKKKDEKKGTLEDQIVQCNPVLEAYGNAKTTRNNNSSRFGKFIRIHFGTQGKIAGAD 266
Query: 182 I 182
I
Sbjct: 267 I 267
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 108/191 (56%), Gaps = 13/191 (6%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D + L+E + ++NL RY IYTY G + VNPY+ L IY
Sbjct: 77 MNPPKFEKLE----DMANMTYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLPIY 132
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
+ + YR + ++PPH+F++A +AY+ + E+Q +++GESG+GKT++ V+ +
Sbjct: 133 TDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTESTKKVIMY 192
Query: 121 IACATPG-----TGPVLNA----VREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEF 171
A PV N + +++ P+LEAFGNA+T++N+NSSRFGK++ I F
Sbjct: 193 FARVAANLYKQKEEPVPNLRASNLEDQIIEANPVLEAFGNAKTVRNNNSSRFGKFIRIHF 252
Query: 172 DYKGDPLGAHI 182
G GA I
Sbjct: 253 GPTGKIAGADI 263
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 12/190 (6%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D + L+E + + NL RY IYTY G + VNPY+ L IY
Sbjct: 77 MNPPKFEKLE----DMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIY 132
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
+ + YR + ++PPH+F++A +AY+ + E+Q +++GESG+GKT+ V+ +
Sbjct: 133 TDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMY 192
Query: 121 ---IACATP-----GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFD 172
+ACA + ++ +++ P+LEA+GNA+T +N+NSSRFGK++ I F
Sbjct: 193 LAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFG 252
Query: 173 YKGDPLGAHI 182
G GA I
Sbjct: 253 PTGKIAGADI 262
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 12/190 (6%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D + L+E + + NL RY IYTY G + VNPY+ L IY
Sbjct: 72 MNPPKFEKLE----DMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIY 127
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
+ + YR + ++PPH+F++A +AY+ + E+Q +++GESG+GKT+ V+ +
Sbjct: 128 TDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMY 187
Query: 121 ---IACATP-----GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFD 172
+ACA + ++ +++ P+LEA+GNA+T +N+NSSRFGK++ I F
Sbjct: 188 LAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFG 247
Query: 173 YKGDPLGAHI 182
G GA I
Sbjct: 248 PTGKIAGADI 257
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 12/190 (6%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D + L+E + + NL RY IYTY G + VNPY+ L IY
Sbjct: 73 MNPPKFEKLE----DMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIY 128
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
+ + YR + ++PPH+F++A +AY+ + E+Q +++GESG+GKT+ V+ +
Sbjct: 129 TDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMY 188
Query: 121 ---IACATP-----GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFD 172
+ACA + ++ +++ P+LEA+GNA+T +N+NSSRFGK++ I F
Sbjct: 189 LAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFG 248
Query: 173 YKGDPLGAHI 182
G GA I
Sbjct: 249 PTGKIAGADI 258
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 120 bits (301), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 12/190 (6%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D + L+E + + NL RY IYTY G + VNPY+ L IY
Sbjct: 77 MNPPKFEKLE----DMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIY 132
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
+ + YR + ++PPH+F++A +AY+ + E+Q +++GESG+GKT+ V+ +
Sbjct: 133 TDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMY 192
Query: 121 ---IACATP-----GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFD 172
+ACA + ++ +++ P+LEA+GNA+T +N+NSSRFGK++ I F
Sbjct: 193 LAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFG 252
Query: 173 YKGDPLGAHI 182
G GA I
Sbjct: 253 PTGKIAGADI 262
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 120 bits (301), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 12/190 (6%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D + L+E + + NL RY IYTY G + VNPY+ L IY
Sbjct: 77 MNPPKFEKLE----DMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIY 132
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
+ + YR + ++PPH+F++A +AY+ + E+Q +++GESG+GKT+ V+ +
Sbjct: 133 TDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMY 192
Query: 121 ---IACATP-----GTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIEFD 172
+ACA + ++ +++ P+LEA+GNA+T +N+NSSRFGK++ I F
Sbjct: 193 LAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFG 252
Query: 173 YKGDPLGAHI 182
G GA I
Sbjct: 253 PTGKIAGADI 262
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 107/192 (55%), Gaps = 14/192 (7%)
Query: 1 MDPPLVVDSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIY 60
M+PP E D + L+E + ++NL RY IYTY G + VNPY+ L IY
Sbjct: 77 MNPPKFEKLE----DMANMTYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLPIY 132
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120
+ + YR + ++PPH+F++A +AY+ + E+Q +++GESG+GKT+ V+ +
Sbjct: 133 TDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMY 192
Query: 121 ---IACATPG-------TGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDIE 170
+ACA ++ +++ P+LEA+GNA+T +N+NSSRFGK++ I
Sbjct: 193 LAKVACAVKKKTSEEEEADQKKGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIH 252
Query: 171 FDYKGDPLGAHI 182
F G GA I
Sbjct: 253 FGPTGKIAGADI 264
>pdb|2YZ2|A Chain A, Crystal Structure Of The Abc Transporter In The Cobalt
Transport System
pdb|2YZ2|B Chain B, Crystal Structure Of The Abc Transporter In The Cobalt
Transport System
Length = 266
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 95 SEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGPVL 132
+E +C++V+G +GSGK+ +V I P +G VL
Sbjct: 31 NEGECLLVAGNTGSGKSTLLQIVAGLIE---PTSGDVL 65
>pdb|4HLU|A Chain A, Structure Of The Ecfa-a' Heterodimer Bound To Adp
pdb|4HLU|B Chain B, Structure Of The Ecfa-a' Heterodimer Bound To Adp
Length = 268
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 95 SEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGPVL 132
+E +C++V+G +GSGK+ +V I P +G VL
Sbjct: 33 NEGECLLVAGNTGSGKSTLLQIVAGLIE---PTSGDVL 67
>pdb|3KLU|A Chain A, Crystal Structure Of The Protein Yqbn. Northeast
Structural Genomics Consortium Target Sr445
Length = 157
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 61 SAELARAYRTRGPFQLPPHIFAIAGSAYRWL 91
+ EL AY+T P ++ + ++ G WL
Sbjct: 97 AKELREAYKTEDPVEVAKRVLSVGGEYANWL 127
>pdb|2WJV|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
pdb|2WJV|B Chain B, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
pdb|2WJY|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2 Orthorhombic Form
Length = 800
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 101 IVSGESGSGKTQAASMVVYFIACATPGTGPVL 132
++ G G+GKT ++ +VY + A G GPVL
Sbjct: 375 LIQGPPGTGKTVTSATIVYHL--ARQGNGPVL 404
>pdb|2XZO|A Chain A, Upf1 Helicase - Rna Complex
pdb|2XZP|A Chain A, Upf1 Helicase
Length = 623
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 101 IVSGESGSGKTQAASMVVYFIACATPGTGPVL 132
++ G G+GKT ++ +VY + A G GPVL
Sbjct: 198 LIQGPPGTGKTVTSATIVYHL--ARQGNGPVL 227
>pdb|2GJK|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
pdb|2GK6|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
pdb|2GK6|B Chain B, Structural And Functional Insights Into The Human Upf1
Helicase Core
pdb|2GK7|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
Length = 624
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 101 IVSGESGSGKTQAASMVVYFIACATPGTGPVL 132
++ G G+GKT ++ +VY + A G GPVL
Sbjct: 199 LIQGPPGTGKTVTSATIVYHL--ARQGNGPVL 228
>pdb|3SGG|A Chain A, Crystal Structure Of A Hypothetical Hydrolase (Bt_2193)
From Bacteroides Thetaiotaomicron Vpi-5482 At 1.25 A
Resolution
Length = 536
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 74 FQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGS 108
+ + P ++ +A +A RW + S++ V+G SGS
Sbjct: 337 YTISPSLYDLAPAALRWYYENSKEGDYFVAGPSGS 371
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,014,451
Number of Sequences: 62578
Number of extensions: 238283
Number of successful extensions: 714
Number of sequences better than 100.0: 70
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 579
Number of HSP's gapped (non-prelim): 71
length of query: 186
length of database: 14,973,337
effective HSP length: 93
effective length of query: 93
effective length of database: 9,153,583
effective search space: 851283219
effective search space used: 851283219
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)