Query psy18111
Match_columns 186
No_of_seqs 111 out of 1193
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 22:49:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18111.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18111hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lkx_A Myosin IE heavy chain; 100.0 3.8E-62 1.3E-66 448.7 19.0 176 10-186 7-183 (697)
2 4db1_A Myosin-7; S1DC, cardiac 100.0 4.4E-62 1.5E-66 452.2 17.9 176 10-186 84-267 (783)
3 4anj_A Unconventional myosin-V 100.0 1.2E-61 4.1E-66 460.0 17.5 175 8-186 54-229 (1052)
4 1w7j_A Myosin VA; motor protei 100.0 2.4E-61 8.2E-66 448.5 18.6 174 11-186 69-243 (795)
5 2v26_A Myosin VI; calmodulin-b 100.0 3.2E-61 1.1E-65 447.4 18.1 174 9-186 51-225 (784)
6 1w9i_A Myosin II heavy chain; 100.0 3.4E-61 1.2E-65 445.3 17.6 175 11-186 86-262 (770)
7 1kk8_A Myosin heavy chain, str 100.0 3.3E-61 1.1E-65 449.5 17.7 175 11-186 83-266 (837)
8 1g8x_A Myosin II heavy chain f 100.0 4.6E-60 1.6E-64 449.4 18.4 175 11-186 86-262 (1010)
9 2ycu_A Non muscle myosin 2C, a 100.0 3.7E-60 1.3E-64 450.0 16.1 175 11-186 60-240 (995)
10 2dfs_A Myosin-5A; myosin-V, in 100.0 6.6E-60 2.3E-64 451.1 17.0 174 11-186 69-243 (1080)
11 1i84_S Smooth muscle myosin he 100.0 1.3E-59 4.6E-64 453.8 16.4 175 11-186 83-270 (1184)
12 4eun_A Thermoresistant glucoki 96.9 0.00066 2.3E-08 52.2 3.7 32 90-121 22-53 (200)
13 3uie_A Adenylyl-sulfate kinase 96.9 0.0011 3.7E-08 51.0 4.8 31 92-122 20-50 (200)
14 3ec2_A DNA replication protein 96.8 0.0012 4.2E-08 49.6 4.2 28 95-122 36-63 (180)
15 1kgd_A CASK, peripheral plasma 96.7 0.00093 3.2E-08 50.6 3.2 27 96-122 4-30 (180)
16 3c8u_A Fructokinase; YP_612366 96.7 0.0016 5.3E-08 50.5 4.4 28 95-122 20-47 (208)
17 1zp6_A Hypothetical protein AT 96.6 0.00086 2.9E-08 50.7 2.6 30 91-120 3-32 (191)
18 1jbk_A CLPB protein; beta barr 96.6 0.0023 7.9E-08 47.3 4.9 31 92-122 38-68 (195)
19 1qhx_A CPT, protein (chloramph 96.6 0.0012 4E-08 49.3 3.2 25 97-121 3-27 (178)
20 2p65_A Hypothetical protein PF 96.6 0.0039 1.3E-07 46.0 6.0 31 92-122 38-68 (187)
21 3a00_A Guanylate kinase, GMP k 96.6 0.0011 3.6E-08 50.5 2.7 25 98-122 2-26 (186)
22 1lvg_A Guanylate kinase, GMP k 96.5 0.0013 4.4E-08 50.8 3.0 27 96-122 3-29 (198)
23 3tr0_A Guanylate kinase, GMP k 96.5 0.0016 5.3E-08 49.7 3.4 26 96-121 6-31 (205)
24 1znw_A Guanylate kinase, GMP k 96.5 0.0016 5.4E-08 50.4 3.3 28 95-122 18-45 (207)
25 3bos_A Putative DNA replicatio 96.5 0.0041 1.4E-07 48.0 5.6 35 88-122 43-77 (242)
26 1zuh_A Shikimate kinase; alpha 96.4 0.002 6.8E-08 47.8 3.4 27 96-122 6-32 (168)
27 2qor_A Guanylate kinase; phosp 96.4 0.0015 5.3E-08 50.3 2.8 27 95-121 10-36 (204)
28 1ex7_A Guanylate kinase; subst 96.4 0.0016 5.5E-08 50.4 2.8 22 100-121 4-25 (186)
29 2j41_A Guanylate kinase; GMP, 96.4 0.0017 5.9E-08 49.4 3.0 26 96-121 5-30 (207)
30 3vaa_A Shikimate kinase, SK; s 96.4 0.0023 8E-08 49.1 3.7 27 96-122 24-50 (199)
31 3tau_A Guanylate kinase, GMP k 96.4 0.0018 6.2E-08 50.2 3.0 28 95-122 6-33 (208)
32 2eyu_A Twitching motility prot 96.4 0.0031 1.1E-07 51.1 4.4 34 88-122 17-50 (261)
33 1knq_A Gluconate kinase; ALFA/ 96.3 0.0031 1.1E-07 47.0 3.9 26 96-121 7-32 (175)
34 3asz_A Uridine kinase; cytidin 96.3 0.0026 9E-08 48.9 3.5 28 95-122 4-31 (211)
35 1z6g_A Guanylate kinase; struc 96.3 0.0021 7.3E-08 50.3 2.8 27 95-121 21-47 (218)
36 3kb2_A SPBC2 prophage-derived 96.2 0.0027 9.4E-08 46.7 3.2 24 99-122 3-26 (173)
37 1s96_A Guanylate kinase, GMP k 96.2 0.0026 8.8E-08 50.3 3.2 28 95-122 14-41 (219)
38 1m7g_A Adenylylsulfate kinase; 96.2 0.0049 1.7E-07 47.6 4.8 32 91-122 19-50 (211)
39 1kht_A Adenylate kinase; phosp 96.2 0.0031 1.1E-07 47.2 3.6 26 97-122 3-28 (192)
40 3t61_A Gluconokinase; PSI-biol 96.2 0.0027 9.1E-08 48.6 3.2 26 97-122 18-43 (202)
41 2rhm_A Putative kinase; P-loop 96.2 0.0033 1.1E-07 47.3 3.6 27 96-122 4-30 (193)
42 2w58_A DNAI, primosome compone 96.2 0.0051 1.7E-07 46.9 4.6 25 98-122 55-79 (202)
43 3iij_A Coilin-interacting nucl 96.2 0.0034 1.2E-07 47.1 3.4 27 96-122 10-36 (180)
44 2pez_A Bifunctional 3'-phospho 96.2 0.004 1.4E-07 46.7 3.8 27 96-122 4-30 (179)
45 1htw_A HI0065; nucleotide-bind 96.1 0.0038 1.3E-07 46.8 3.6 28 95-122 31-58 (158)
46 2kjq_A DNAA-related protein; s 96.1 0.0037 1.3E-07 46.3 3.4 27 96-122 35-61 (149)
47 1kag_A SKI, shikimate kinase I 96.1 0.0031 1.1E-07 46.7 2.9 26 97-122 4-29 (173)
48 3ney_A 55 kDa erythrocyte memb 96.1 0.0032 1.1E-07 49.2 3.1 27 96-122 18-44 (197)
49 1ye8_A Protein THEP1, hypothet 96.0 0.0041 1.4E-07 47.4 3.4 24 99-122 2-25 (178)
50 4gp7_A Metallophosphoesterase; 96.0 0.0068 2.3E-07 45.5 4.6 21 95-115 7-27 (171)
51 2yvu_A Probable adenylyl-sulfa 96.0 0.0041 1.4E-07 46.9 3.3 27 96-122 12-38 (186)
52 3trf_A Shikimate kinase, SK; a 96.0 0.0045 1.5E-07 46.4 3.6 26 97-122 5-30 (185)
53 2bbw_A Adenylate kinase 4, AK4 96.0 0.0042 1.4E-07 49.2 3.5 27 96-122 26-52 (246)
54 2f1r_A Molybdopterin-guanine d 96.0 0.0021 7.2E-08 49.0 1.5 25 98-122 3-27 (171)
55 2chg_A Replication factor C sm 96.0 0.0094 3.2E-07 44.9 5.1 34 89-122 30-63 (226)
56 3cr8_A Sulfate adenylyltranfer 96.0 0.0057 1.9E-07 54.9 4.4 29 94-122 366-394 (552)
57 1odf_A YGR205W, hypothetical 3 95.9 0.0052 1.8E-07 50.6 3.8 29 94-122 28-56 (290)
58 1njg_A DNA polymerase III subu 95.9 0.013 4.4E-07 44.6 5.8 29 94-122 42-70 (250)
59 3aez_A Pantothenate kinase; tr 95.9 0.0055 1.9E-07 51.0 3.9 29 94-122 87-115 (312)
60 1gvn_B Zeta; postsegregational 95.9 0.011 3.6E-07 48.5 5.6 26 96-121 32-57 (287)
61 1rz3_A Hypothetical protein rb 95.9 0.0051 1.7E-07 47.3 3.5 28 95-122 20-47 (201)
62 1ly1_A Polynucleotide kinase; 95.9 0.0051 1.7E-07 45.6 3.3 23 97-119 2-24 (181)
63 1nks_A Adenylate kinase; therm 95.9 0.0041 1.4E-07 46.6 2.8 24 99-122 3-26 (194)
64 1sq5_A Pantothenate kinase; P- 95.9 0.0089 3E-07 49.3 5.0 28 95-122 78-105 (308)
65 2bdt_A BH3686; alpha-beta prot 95.9 0.005 1.7E-07 46.5 3.2 23 98-120 3-25 (189)
66 3cm0_A Adenylate kinase; ATP-b 95.9 0.0054 1.8E-07 46.0 3.3 27 96-122 3-29 (186)
67 1cke_A CK, MSSA, protein (cyti 95.9 0.0057 1.9E-07 47.3 3.5 25 97-121 5-29 (227)
68 3tlx_A Adenylate kinase 2; str 95.8 0.018 6E-07 45.8 6.3 28 94-121 26-53 (243)
69 3lw7_A Adenylate kinase relate 95.8 0.0045 1.5E-07 45.3 2.6 22 99-121 3-24 (179)
70 1p9r_A General secretion pathw 95.8 0.01 3.5E-07 51.4 5.3 36 86-122 157-192 (418)
71 2jaq_A Deoxyguanosine kinase; 95.8 0.0061 2.1E-07 46.1 3.4 24 99-122 2-25 (205)
72 3lnc_A Guanylate kinase, GMP k 95.7 0.0044 1.5E-07 48.5 2.4 27 95-121 25-52 (231)
73 1e6c_A Shikimate kinase; phosp 95.7 0.0063 2.1E-07 45.0 3.2 24 99-122 4-27 (173)
74 1zd8_A GTP:AMP phosphotransfer 95.7 0.005 1.7E-07 48.1 2.7 27 95-121 5-31 (227)
75 2v9p_A Replication protein E1; 95.7 0.0073 2.5E-07 50.3 3.8 36 86-121 114-150 (305)
76 1gtv_A TMK, thymidylate kinase 95.7 0.0028 9.6E-08 48.6 1.2 24 99-122 2-25 (214)
77 1via_A Shikimate kinase; struc 95.7 0.0063 2.2E-07 45.4 3.1 24 99-122 6-29 (175)
78 2jeo_A Uridine-cytidine kinase 95.7 0.0084 2.9E-07 47.5 3.9 28 95-122 23-50 (245)
79 2c95_A Adenylate kinase 1; tra 95.7 0.0073 2.5E-07 45.4 3.4 27 96-122 8-34 (196)
80 1tev_A UMP-CMP kinase; ploop, 95.6 0.0084 2.9E-07 44.9 3.7 25 97-121 3-27 (196)
81 2pt5_A Shikimate kinase, SK; a 95.6 0.0078 2.7E-07 44.3 3.4 24 99-122 2-25 (168)
82 2iyv_A Shikimate kinase, SK; t 95.6 0.007 2.4E-07 45.4 3.2 24 99-122 4-27 (184)
83 2gks_A Bifunctional SAT/APS ki 95.6 0.014 4.8E-07 52.2 5.6 48 74-122 345-397 (546)
84 1l8q_A Chromosomal replication 95.6 0.014 4.8E-07 47.9 5.2 35 88-122 26-62 (324)
85 2plr_A DTMP kinase, probable t 95.6 0.0093 3.2E-07 45.3 3.8 26 97-122 4-29 (213)
86 3jvv_A Twitching mobility prot 95.6 0.012 4.2E-07 49.8 4.8 34 88-122 115-148 (356)
87 3b9q_A Chloroplast SRP recepto 95.6 0.012 4E-07 48.8 4.6 31 96-127 99-129 (302)
88 2vli_A Antibiotic resistance p 95.6 0.0057 2E-07 45.6 2.4 26 97-122 5-30 (183)
89 3e70_C DPA, signal recognition 95.6 0.011 3.9E-07 49.5 4.5 32 95-127 127-158 (328)
90 1rj9_A FTSY, signal recognitio 95.5 0.011 3.8E-07 48.9 4.3 27 96-122 101-127 (304)
91 3tif_A Uncharacterized ABC tra 95.5 0.0075 2.6E-07 48.0 3.1 28 95-122 29-56 (235)
92 2ewv_A Twitching motility prot 95.5 0.0094 3.2E-07 50.7 3.9 29 94-122 133-161 (372)
93 2p5t_B PEZT; postsegregational 95.5 0.0072 2.5E-07 48.2 3.0 28 95-122 30-57 (253)
94 2z0h_A DTMP kinase, thymidylat 95.5 0.0082 2.8E-07 45.2 3.2 24 99-122 2-25 (197)
95 2cdn_A Adenylate kinase; phosp 95.5 0.01 3.5E-07 45.2 3.7 28 95-122 18-45 (201)
96 1np6_A Molybdopterin-guanine d 95.5 0.0096 3.3E-07 45.4 3.5 26 97-122 6-31 (174)
97 4e22_A Cytidylate kinase; P-lo 95.5 0.0089 3E-07 47.8 3.4 27 95-121 25-51 (252)
98 1qf9_A UMP/CMP kinase, protein 95.5 0.01 3.4E-07 44.3 3.5 25 97-121 6-30 (194)
99 2wwf_A Thymidilate kinase, put 95.5 0.0091 3.1E-07 45.6 3.3 27 96-122 9-35 (212)
100 2pbr_A DTMP kinase, thymidylat 95.5 0.0088 3E-07 44.8 3.2 23 99-121 2-24 (195)
101 2qt1_A Nicotinamide riboside k 95.5 0.006 2.1E-07 46.8 2.3 26 96-121 20-45 (207)
102 1nn5_A Similar to deoxythymidy 95.5 0.0098 3.3E-07 45.4 3.5 28 95-122 7-34 (215)
103 1uf9_A TT1252 protein; P-loop, 95.4 0.0093 3.2E-07 45.1 3.2 25 96-120 7-31 (203)
104 1ukz_A Uridylate kinase; trans 95.4 0.011 3.6E-07 45.1 3.5 26 96-121 14-39 (203)
105 1ofh_A ATP-dependent HSL prote 95.4 0.018 6.3E-07 46.2 5.1 28 95-122 48-75 (310)
106 4a74_A DNA repair and recombin 95.4 0.0087 3E-07 46.1 3.0 28 95-122 23-50 (231)
107 2bwj_A Adenylate kinase 5; pho 95.4 0.0095 3.2E-07 44.9 3.1 26 97-122 12-37 (199)
108 3fb4_A Adenylate kinase; psych 95.4 0.0095 3.2E-07 45.8 3.2 24 99-122 2-25 (216)
109 2qby_B CDC6 homolog 3, cell di 95.3 0.023 7.7E-07 47.2 5.6 37 86-122 34-70 (384)
110 2gza_A Type IV secretion syste 95.3 0.0052 1.8E-07 52.0 1.6 28 95-122 173-200 (361)
111 2ehv_A Hypothetical protein PH 95.3 0.01 3.4E-07 46.3 3.2 26 95-120 28-53 (251)
112 2i3b_A HCR-ntpase, human cance 95.3 0.01 3.6E-07 45.7 3.2 25 98-122 2-26 (189)
113 3n70_A Transport activator; si 95.3 0.0095 3.2E-07 43.4 2.8 27 95-121 22-48 (145)
114 3b85_A Phosphate starvation-in 95.3 0.013 4.4E-07 45.8 3.7 37 86-127 14-50 (208)
115 1fnn_A CDC6P, cell division co 95.3 0.027 9.2E-07 46.7 5.9 35 88-122 33-69 (389)
116 1d2n_A N-ethylmaleimide-sensit 95.3 0.021 7.1E-07 45.6 5.0 29 94-122 61-89 (272)
117 2v54_A DTMP kinase, thymidylat 95.3 0.01 3.6E-07 45.0 3.0 26 96-121 3-28 (204)
118 1svm_A Large T antigen; AAA+ f 95.3 0.032 1.1E-06 47.7 6.4 47 76-122 147-194 (377)
119 1y63_A LMAJ004144AAA protein; 95.3 0.013 4.3E-07 44.3 3.5 25 96-120 9-33 (184)
120 3nwj_A ATSK2; P loop, shikimat 95.2 0.011 3.8E-07 47.7 3.2 26 97-122 48-73 (250)
121 3tqf_A HPR(Ser) kinase; transf 95.2 0.012 4E-07 45.5 3.1 24 96-119 15-38 (181)
122 1aky_A Adenylate kinase; ATP:A 95.2 0.014 4.8E-07 45.2 3.7 27 96-122 3-29 (220)
123 1xjc_A MOBB protein homolog; s 95.2 0.014 4.8E-07 44.5 3.6 25 98-122 5-29 (169)
124 3tqc_A Pantothenate kinase; bi 95.2 0.019 6.6E-07 48.0 4.7 24 99-122 94-117 (321)
125 1g8f_A Sulfate adenylyltransfe 95.2 0.016 5.4E-07 51.6 4.3 45 76-122 376-420 (511)
126 1zak_A Adenylate kinase; ATP:A 95.2 0.01 3.5E-07 46.0 2.8 27 96-122 4-30 (222)
127 2og2_A Putative signal recogni 95.2 0.018 6.3E-07 48.9 4.5 48 79-127 128-186 (359)
128 2w0m_A SSO2452; RECA, SSPF, un 95.2 0.016 5.4E-07 44.4 3.8 28 95-122 21-48 (235)
129 3dl0_A Adenylate kinase; phosp 95.2 0.01 3.5E-07 45.7 2.7 23 99-121 2-24 (216)
130 3ake_A Cytidylate kinase; CMP 95.1 0.014 4.7E-07 44.3 3.4 24 99-122 4-27 (208)
131 1lv7_A FTSH; alpha/beta domain 95.1 0.016 5.4E-07 45.9 3.8 27 96-122 44-70 (257)
132 1mv5_A LMRA, multidrug resista 95.1 0.0075 2.6E-07 48.1 1.8 28 95-122 26-53 (243)
133 2vp4_A Deoxynucleoside kinase; 95.1 0.0072 2.5E-07 47.5 1.7 26 95-120 18-43 (230)
134 3te6_A Regulatory protein SIR3 95.1 0.025 8.6E-07 47.3 5.0 37 86-122 34-70 (318)
135 2qz4_A Paraplegin; AAA+, SPG7, 95.1 0.017 5.8E-07 45.4 3.8 28 95-122 37-64 (262)
136 4g1u_C Hemin import ATP-bindin 95.1 0.0068 2.3E-07 49.2 1.5 27 96-122 36-62 (266)
137 2cbz_A Multidrug resistance-as 95.1 0.013 4.5E-07 46.6 3.1 28 95-122 29-56 (237)
138 2ze6_A Isopentenyl transferase 95.0 0.013 4.6E-07 46.9 3.1 24 99-122 3-26 (253)
139 3a4m_A L-seryl-tRNA(SEC) kinas 95.0 0.018 6E-07 46.2 3.8 26 97-122 4-29 (260)
140 2ff7_A Alpha-hemolysin translo 95.0 0.014 4.6E-07 46.9 3.0 27 96-122 34-60 (247)
141 2d2e_A SUFC protein; ABC-ATPas 94.9 0.015 5.1E-07 46.6 3.2 25 96-120 28-52 (250)
142 1b0u_A Histidine permease; ABC 94.9 0.015 5.1E-07 47.0 3.1 28 95-122 30-57 (262)
143 2ghi_A Transport protein; mult 94.9 0.015 5.1E-07 46.9 3.1 28 95-122 44-71 (260)
144 2zu0_C Probable ATP-dependent 94.9 0.016 5.5E-07 47.0 3.3 27 95-121 44-70 (267)
145 2pcj_A ABC transporter, lipopr 94.9 0.013 4.4E-07 46.2 2.6 27 96-122 29-55 (224)
146 3pvs_A Replication-associated 94.9 0.025 8.7E-07 49.2 4.7 37 86-122 39-75 (447)
147 3gfo_A Cobalt import ATP-bindi 94.9 0.015 5E-07 47.6 3.0 28 95-122 32-59 (275)
148 2yhs_A FTSY, cell division pro 94.8 0.025 8.4E-07 50.2 4.6 44 79-122 266-318 (503)
149 3syl_A Protein CBBX; photosynt 94.8 0.034 1.1E-06 44.9 5.1 28 95-122 65-92 (309)
150 3nh6_A ATP-binding cassette SU 94.8 0.0069 2.4E-07 50.4 0.9 28 95-122 78-105 (306)
151 2olj_A Amino acid ABC transpor 94.8 0.016 5.5E-07 47.0 3.1 28 95-122 48-75 (263)
152 2onk_A Molybdate/tungstate ABC 94.8 0.016 5.5E-07 46.3 3.1 27 95-122 23-49 (240)
153 1e4v_A Adenylate kinase; trans 94.8 0.015 5.1E-07 44.9 2.8 23 99-121 2-24 (214)
154 4eaq_A DTMP kinase, thymidylat 94.8 0.023 7.8E-07 44.9 3.9 27 96-122 25-51 (229)
155 1g6h_A High-affinity branched- 94.8 0.016 5.4E-07 46.6 3.0 27 96-122 32-58 (257)
156 1sxj_C Activator 1 40 kDa subu 94.8 0.036 1.2E-06 45.8 5.2 35 88-122 37-71 (340)
157 1ixz_A ATP-dependent metallopr 94.8 0.018 6.1E-07 45.5 3.2 25 97-121 49-73 (254)
158 1iqp_A RFCS; clamp loader, ext 94.8 0.043 1.5E-06 44.3 5.5 35 88-122 37-71 (327)
159 2ixe_A Antigen peptide transpo 94.8 0.017 5.9E-07 46.9 3.1 28 95-122 43-70 (271)
160 4fcw_A Chaperone protein CLPB; 94.8 0.024 8.3E-07 45.8 4.0 26 97-122 47-72 (311)
161 1m8p_A Sulfate adenylyltransfe 94.8 0.019 6.6E-07 51.6 3.7 29 94-122 393-421 (573)
162 2xb4_A Adenylate kinase; ATP-b 94.7 0.018 6.3E-07 44.9 3.1 24 99-122 2-25 (223)
163 2yz2_A Putative ABC transporte 94.7 0.018 6.2E-07 46.6 3.1 28 95-122 31-58 (266)
164 1vpl_A ABC transporter, ATP-bi 94.7 0.019 6.5E-07 46.3 3.1 28 95-122 39-66 (256)
165 1vht_A Dephospho-COA kinase; s 94.6 0.024 8.2E-07 43.7 3.6 23 97-119 4-26 (218)
166 2pze_A Cystic fibrosis transme 94.6 0.019 6.4E-07 45.4 3.0 28 95-122 32-59 (229)
167 3b9p_A CG5977-PA, isoform A; A 94.6 0.022 7.7E-07 45.9 3.6 27 96-122 53-79 (297)
168 2z4s_A Chromosomal replication 94.6 0.04 1.4E-06 47.7 5.3 38 85-122 117-155 (440)
169 2qby_A CDC6 homolog 1, cell di 94.6 0.015 5E-07 48.0 2.5 29 94-122 42-70 (386)
170 2if2_A Dephospho-COA kinase; a 94.6 0.016 5.5E-07 44.1 2.5 21 99-119 3-23 (204)
171 1sgw_A Putative ABC transporte 94.6 0.016 5.5E-07 45.6 2.6 27 96-122 34-60 (214)
172 3uk6_A RUVB-like 2; hexameric 94.6 0.045 1.5E-06 45.3 5.4 25 98-122 71-95 (368)
173 2v1u_A Cell division control p 94.6 0.012 4.1E-07 48.7 1.9 29 94-122 41-69 (387)
174 1ji0_A ABC transporter; ATP bi 94.6 0.02 6.7E-07 45.6 3.0 27 96-122 31-57 (240)
175 1ak2_A Adenylate kinase isoenz 94.6 0.027 9.3E-07 44.1 3.8 27 96-122 15-41 (233)
176 2bjv_A PSP operon transcriptio 94.6 0.035 1.2E-06 44.1 4.5 27 96-122 28-54 (265)
177 1vma_A Cell division protein F 94.6 0.028 9.6E-07 46.6 4.0 43 80-122 79-129 (306)
178 3sop_A Neuronal-specific septi 94.6 0.019 6.4E-07 46.7 2.9 24 99-122 4-27 (270)
179 3rlf_A Maltose/maltodextrin im 94.5 0.021 7.2E-07 48.9 3.3 28 95-122 27-54 (381)
180 1nij_A Hypothetical protein YJ 94.5 0.017 5.9E-07 47.8 2.7 25 97-121 4-28 (318)
181 1jjv_A Dephospho-COA kinase; P 94.5 0.019 6.6E-07 43.8 2.7 21 99-119 4-24 (206)
182 3h4m_A Proteasome-activating n 94.5 0.026 8.7E-07 45.2 3.6 28 95-122 49-76 (285)
183 1uj2_A Uridine-cytidine kinase 94.5 0.026 8.9E-07 44.8 3.5 27 96-122 21-47 (252)
184 2oap_1 GSPE-2, type II secreti 94.4 0.011 3.9E-07 52.4 1.4 27 96-122 259-285 (511)
185 1a7j_A Phosphoribulokinase; tr 94.4 0.019 6.6E-07 47.0 2.7 27 96-122 4-30 (290)
186 3co5_A Putative two-component 94.4 0.01 3.5E-07 43.1 1.0 26 95-120 25-50 (143)
187 1sxj_E Activator 1 40 kDa subu 94.4 0.022 7.6E-07 46.9 3.1 24 99-122 38-61 (354)
188 1sxj_D Activator 1 41 kDa subu 94.4 0.034 1.2E-06 45.6 4.2 35 88-122 49-83 (353)
189 3cf0_A Transitional endoplasmi 94.4 0.027 9.4E-07 46.0 3.5 28 95-122 47-74 (301)
190 1in4_A RUVB, holliday junction 94.4 0.061 2.1E-06 44.6 5.7 27 95-121 49-75 (334)
191 2nq2_C Hypothetical ABC transp 94.4 0.023 8E-07 45.6 3.1 27 96-122 30-56 (253)
192 2ihy_A ABC transporter, ATP-bi 94.4 0.023 7.9E-07 46.4 3.0 27 96-122 46-72 (279)
193 1jr3_A DNA polymerase III subu 94.3 0.064 2.2E-06 44.2 5.8 29 94-122 35-63 (373)
194 2qi9_C Vitamin B12 import ATP- 94.3 0.024 8.1E-07 45.6 3.0 28 95-122 24-51 (249)
195 1ltq_A Polynucleotide kinase; 94.3 0.027 9.3E-07 45.5 3.3 23 98-120 3-25 (301)
196 1cr0_A DNA primase/helicase; R 94.3 0.029 1E-06 45.4 3.5 29 94-122 32-60 (296)
197 1lw7_A Transcriptional regulat 94.3 0.022 7.5E-07 47.9 2.8 26 97-122 170-195 (365)
198 2chq_A Replication factor C sm 94.3 0.032 1.1E-06 44.9 3.7 31 92-122 33-63 (319)
199 1iy2_A ATP-dependent metallopr 94.3 0.027 9.2E-07 45.3 3.2 25 97-121 73-97 (278)
200 3r20_A Cytidylate kinase; stru 94.2 0.032 1.1E-06 44.5 3.6 27 96-122 8-34 (233)
201 3fvq_A Fe(3+) IONS import ATP- 94.2 0.025 8.4E-07 48.1 2.9 28 95-122 28-55 (359)
202 3be4_A Adenylate kinase; malar 94.2 0.025 8.6E-07 43.8 2.8 25 98-122 6-30 (217)
203 2hf9_A Probable hydrogenase ni 94.2 0.063 2.2E-06 41.2 5.1 34 89-122 30-63 (226)
204 2cvh_A DNA repair and recombin 94.2 0.031 1.1E-06 42.6 3.3 25 95-119 18-42 (220)
205 1q3t_A Cytidylate kinase; nucl 94.2 0.039 1.3E-06 43.2 3.9 27 95-121 14-40 (236)
206 2pt7_A CAG-ALFA; ATPase, prote 94.1 0.012 4.1E-07 49.2 0.9 28 95-122 169-196 (330)
207 3u61_B DNA polymerase accessor 94.1 0.11 3.7E-06 42.4 6.6 56 65-122 17-73 (324)
208 2r62_A Cell division protease 94.1 0.022 7.4E-07 45.3 2.3 27 96-122 43-69 (268)
209 3tui_C Methionine import ATP-b 94.1 0.03 1E-06 47.7 3.3 28 95-122 52-79 (366)
210 1sxj_B Activator 1 37 kDa subu 94.0 0.056 1.9E-06 43.5 4.7 35 88-122 33-67 (323)
211 2ga8_A Hypothetical 39.9 kDa p 94.0 0.063 2.2E-06 45.6 5.1 41 82-122 6-49 (359)
212 2yyz_A Sugar ABC transporter, 94.0 0.032 1.1E-06 47.4 3.3 28 95-122 27-54 (359)
213 2it1_A 362AA long hypothetical 94.0 0.033 1.1E-06 47.4 3.3 28 95-122 27-54 (362)
214 2px0_A Flagellar biosynthesis 94.0 0.037 1.3E-06 45.5 3.5 27 96-122 104-130 (296)
215 3zvl_A Bifunctional polynucleo 94.0 0.025 8.5E-07 48.7 2.6 28 95-122 256-283 (416)
216 2dpy_A FLII, flagellum-specifi 93.9 0.034 1.2E-06 48.3 3.3 38 85-122 145-182 (438)
217 1z47_A CYSA, putative ABC-tran 93.9 0.034 1.2E-06 47.2 3.2 28 95-122 39-66 (355)
218 3pfi_A Holliday junction ATP-d 93.9 0.066 2.3E-06 43.9 4.9 28 95-122 53-80 (338)
219 1hqc_A RUVB; extended AAA-ATPa 93.9 0.057 1.9E-06 43.8 4.5 28 95-122 36-63 (324)
220 1n0w_A DNA repair protein RAD5 93.9 0.036 1.2E-06 43.0 3.1 27 95-121 22-48 (243)
221 4edh_A DTMP kinase, thymidylat 93.9 0.048 1.6E-06 42.7 3.8 27 96-122 5-31 (213)
222 3sr0_A Adenylate kinase; phosp 93.9 0.037 1.3E-06 43.1 3.2 24 99-122 2-25 (206)
223 3foz_A TRNA delta(2)-isopenten 93.9 0.039 1.3E-06 46.2 3.4 29 94-122 7-35 (316)
224 2wsm_A Hydrogenase expression/ 93.8 0.067 2.3E-06 40.8 4.6 32 91-122 24-55 (221)
225 2pjz_A Hypothetical protein ST 93.8 0.033 1.1E-06 45.1 2.9 25 97-121 30-54 (263)
226 3umf_A Adenylate kinase; rossm 93.8 0.049 1.7E-06 42.9 3.8 28 95-122 27-54 (217)
227 1v43_A Sugar-binding transport 93.8 0.037 1.2E-06 47.2 3.3 28 95-122 35-62 (372)
228 1w5s_A Origin recognition comp 93.8 0.075 2.6E-06 44.4 5.2 28 95-122 48-77 (412)
229 2obl_A ESCN; ATPase, hydrolase 93.8 0.033 1.1E-06 46.9 3.0 39 84-122 58-96 (347)
230 2bbs_A Cystic fibrosis transme 93.8 0.032 1.1E-06 45.9 2.8 28 95-122 62-89 (290)
231 3ld9_A DTMP kinase, thymidylat 93.8 0.052 1.8E-06 43.0 3.9 29 94-122 18-46 (223)
232 1g8p_A Magnesium-chelatase 38 93.8 0.035 1.2E-06 45.5 3.1 26 97-122 45-70 (350)
233 1zu4_A FTSY; GTPase, signal re 93.8 0.051 1.7E-06 45.2 4.0 27 96-122 104-130 (320)
234 2ocp_A DGK, deoxyguanosine kin 93.8 0.035 1.2E-06 43.6 2.9 26 97-122 2-27 (241)
235 2h92_A Cytidylate kinase; ross 93.8 0.034 1.2E-06 42.7 2.8 25 97-121 3-27 (219)
236 3kta_A Chromosome segregation 93.7 0.038 1.3E-06 41.2 2.9 25 98-122 27-51 (182)
237 2grj_A Dephospho-COA kinase; T 93.7 0.046 1.6E-06 42.1 3.4 28 94-121 9-36 (192)
238 2qmh_A HPR kinase/phosphorylas 93.7 0.036 1.2E-06 43.6 2.8 27 96-122 33-59 (205)
239 3llm_A ATP-dependent RNA helic 93.7 0.077 2.6E-06 41.5 4.8 36 80-118 62-97 (235)
240 1g29_1 MALK, maltose transport 93.7 0.038 1.3E-06 47.1 3.2 27 96-122 28-54 (372)
241 1a5t_A Delta prime, HOLB; zinc 93.7 0.11 3.8E-06 42.9 6.0 30 93-122 20-49 (334)
242 3b5x_A Lipid A export ATP-bind 93.7 0.031 1.1E-06 50.1 2.7 32 95-127 367-398 (582)
243 3gd7_A Fusion complex of cysti 93.7 0.036 1.2E-06 47.6 2.9 28 95-122 45-72 (390)
244 1ko7_A HPR kinase/phosphatase; 93.6 0.039 1.3E-06 46.1 3.1 25 96-120 143-167 (314)
245 3d31_A Sulfate/molybdate ABC t 93.6 0.03 1E-06 47.4 2.4 28 95-122 24-51 (348)
246 2qgz_A Helicase loader, putati 93.6 0.1 3.5E-06 43.0 5.6 26 97-122 152-177 (308)
247 2yv5_A YJEQ protein; hydrolase 93.6 0.065 2.2E-06 44.0 4.3 33 89-122 157-189 (302)
248 3t15_A Ribulose bisphosphate c 93.6 0.047 1.6E-06 44.5 3.4 28 95-122 34-61 (293)
249 1r6b_X CLPA protein; AAA+, N-t 93.5 0.14 4.9E-06 46.9 6.9 64 57-122 169-232 (758)
250 3lv8_A DTMP kinase, thymidylat 93.5 0.05 1.7E-06 43.4 3.3 27 96-122 26-52 (236)
251 1um8_A ATP-dependent CLP prote 93.5 0.043 1.5E-06 46.0 3.1 26 96-121 71-96 (376)
252 3v9p_A DTMP kinase, thymidylat 93.5 0.049 1.7E-06 43.2 3.3 27 96-122 24-50 (227)
253 3hws_A ATP-dependent CLP prote 93.4 0.072 2.5E-06 44.5 4.4 26 96-121 50-75 (363)
254 2qm8_A GTPase/ATPase; G protei 93.4 0.079 2.7E-06 44.3 4.6 38 85-122 42-80 (337)
255 3eie_A Vacuolar protein sortin 93.4 0.061 2.1E-06 44.2 3.9 27 96-122 50-76 (322)
256 2f6r_A COA synthase, bifunctio 93.4 0.052 1.8E-06 44.1 3.4 24 96-119 74-97 (281)
257 2npi_A Protein CLP1; CLP1-PCF1 93.4 0.037 1.3E-06 48.4 2.6 29 94-122 135-163 (460)
258 3d8b_A Fidgetin-like protein 1 93.3 0.055 1.9E-06 45.3 3.5 28 95-122 115-142 (357)
259 2dr3_A UPF0273 protein PH0284; 93.3 0.058 2E-06 41.7 3.4 27 96-122 22-48 (247)
260 2axn_A 6-phosphofructo-2-kinas 93.2 0.062 2.1E-06 47.7 3.9 27 96-122 34-60 (520)
261 1oxx_K GLCV, glucose, ABC tran 93.2 0.03 1E-06 47.3 1.8 28 95-122 29-56 (353)
262 3d3q_A TRNA delta(2)-isopenten 93.2 0.046 1.6E-06 46.2 2.8 25 98-122 8-32 (340)
263 1knx_A Probable HPR(Ser) kinas 93.2 0.043 1.5E-06 45.8 2.6 24 96-119 146-169 (312)
264 4tmk_A Protein (thymidylate ki 93.2 0.059 2E-06 42.2 3.3 26 97-122 3-28 (213)
265 3m6a_A ATP-dependent protease 93.2 0.073 2.5E-06 47.4 4.2 29 94-122 105-133 (543)
266 1sxj_A Activator 1 95 kDa subu 93.1 0.086 3E-06 46.4 4.6 27 96-122 76-102 (516)
267 1ojl_A Transcriptional regulat 93.1 0.056 1.9E-06 44.4 3.2 28 95-122 23-50 (304)
268 1nlf_A Regulatory protein REPA 93.1 0.062 2.1E-06 43.2 3.4 27 96-122 29-55 (279)
269 3tmk_A Thymidylate kinase; pho 93.1 0.068 2.3E-06 42.0 3.5 27 96-122 4-30 (216)
270 1xwi_A SKD1 protein; VPS4B, AA 93.0 0.066 2.2E-06 44.3 3.6 26 96-121 44-69 (322)
271 1x6v_B Bifunctional 3'-phospho 93.0 0.1 3.4E-06 47.6 5.0 26 96-121 51-76 (630)
272 2x8a_A Nuclear valosin-contain 93.0 0.052 1.8E-06 43.9 2.9 26 97-122 44-69 (274)
273 3euj_A Chromosome partition pr 93.0 0.067 2.3E-06 47.2 3.7 25 98-122 30-54 (483)
274 3b60_A Lipid A export ATP-bind 92.9 0.035 1.2E-06 49.7 1.7 28 95-122 367-394 (582)
275 3pxg_A Negative regulator of g 92.8 0.12 4E-06 45.1 4.9 32 91-122 195-226 (468)
276 3qf4_B Uncharacterized ABC tra 92.8 0.036 1.2E-06 49.9 1.7 28 95-122 379-406 (598)
277 1bif_A 6-phosphofructo-2-kinas 92.8 0.079 2.7E-06 46.1 3.8 28 95-122 37-64 (469)
278 3crm_A TRNA delta(2)-isopenten 92.7 0.067 2.3E-06 44.8 3.2 26 97-122 5-30 (323)
279 2yl4_A ATP-binding cassette SU 92.7 0.036 1.2E-06 49.8 1.6 28 95-122 368-395 (595)
280 2qp9_X Vacuolar protein sortin 92.6 0.076 2.6E-06 44.5 3.4 26 97-122 84-109 (355)
281 2f9l_A RAB11B, member RAS onco 92.6 0.07 2.4E-06 40.2 2.9 22 99-120 7-28 (199)
282 3upu_A ATP-dependent DNA helic 92.6 0.22 7.4E-06 43.1 6.3 25 98-122 46-70 (459)
283 3exa_A TRNA delta(2)-isopenten 92.5 0.074 2.5E-06 44.5 3.2 26 97-122 3-28 (322)
284 1yqt_A RNAse L inhibitor; ATP- 92.5 0.072 2.4E-06 47.4 3.2 27 96-122 46-72 (538)
285 1ls1_A Signal recognition part 92.4 0.098 3.3E-06 42.9 3.8 27 96-122 97-123 (295)
286 3kl4_A SRP54, signal recogniti 92.4 0.2 6.9E-06 43.5 5.9 27 96-122 96-122 (433)
287 1oix_A RAS-related protein RAB 92.4 0.072 2.5E-06 40.0 2.7 23 99-121 31-53 (191)
288 3qf4_A ABC transporter, ATP-bi 92.3 0.036 1.2E-06 49.8 1.0 28 95-122 367-394 (587)
289 4a82_A Cystic fibrosis transme 92.2 0.031 1.1E-06 50.1 0.5 28 95-122 365-392 (578)
290 3a8t_A Adenylate isopentenyltr 92.2 0.071 2.4E-06 45.0 2.6 28 95-122 38-65 (339)
291 1u0l_A Probable GTPase ENGC; p 92.2 0.098 3.3E-06 42.8 3.4 31 92-122 164-194 (301)
292 4ag6_A VIRB4 ATPase, type IV s 92.0 0.1 3.5E-06 44.0 3.5 27 96-122 34-60 (392)
293 1z2a_A RAS-related protein RAB 92.0 0.095 3.3E-06 37.6 2.9 21 99-119 7-27 (168)
294 3ice_A Transcription terminati 92.0 0.18 6E-06 43.7 4.9 44 79-122 156-199 (422)
295 3vfd_A Spastin; ATPase, microt 91.9 0.11 3.8E-06 43.8 3.6 27 96-122 147-173 (389)
296 3ozx_A RNAse L inhibitor; ATP 91.9 0.093 3.2E-06 46.8 3.2 28 95-122 23-50 (538)
297 1p5z_B DCK, deoxycytidine kina 91.9 0.043 1.5E-06 43.7 1.0 28 95-122 22-49 (263)
298 3fdi_A Uncharacterized protein 91.9 0.088 3E-06 40.6 2.7 25 98-122 7-31 (201)
299 3dm5_A SRP54, signal recogniti 91.8 0.24 8.2E-06 43.2 5.7 27 96-122 99-125 (443)
300 1tf7_A KAIC; homohexamer, hexa 91.8 0.083 2.8E-06 46.6 2.8 31 87-117 27-59 (525)
301 3j16_B RLI1P; ribosome recycli 91.7 0.073 2.5E-06 48.2 2.3 28 95-122 101-128 (608)
302 2rcn_A Probable GTPase ENGC; Y 91.6 0.13 4.3E-06 43.7 3.6 27 95-121 213-239 (358)
303 2dyk_A GTP-binding protein; GT 91.6 0.11 3.7E-06 37.1 2.8 21 99-119 3-23 (161)
304 3k1j_A LON protease, ATP-depen 91.6 0.078 2.7E-06 47.7 2.4 27 96-122 59-85 (604)
305 2qen_A Walker-type ATPase; unk 91.6 0.18 6.2E-06 40.8 4.5 23 98-120 32-54 (350)
306 2fna_A Conserved hypothetical 91.6 0.19 6.6E-06 40.7 4.6 24 98-121 31-54 (357)
307 1pzn_A RAD51, DNA repair and r 91.6 0.1 3.6E-06 43.7 3.0 27 95-121 129-155 (349)
308 3eph_A TRNA isopentenyltransfe 91.6 0.096 3.3E-06 45.3 2.8 25 98-122 3-27 (409)
309 2qag_B Septin-6, protein NEDD5 91.5 0.11 3.6E-06 45.3 3.0 28 94-121 37-66 (427)
310 1u8z_A RAS-related protein RAL 91.4 0.12 4.1E-06 36.8 2.9 21 99-119 6-26 (168)
311 2zej_A Dardarin, leucine-rich 91.4 0.089 3E-06 39.1 2.2 21 99-119 4-24 (184)
312 2ce2_X GTPase HRAS; signaling 91.3 0.11 3.6E-06 37.0 2.5 21 99-119 5-25 (166)
313 3pxi_A Negative regulator of g 91.3 0.2 6.9E-06 46.0 4.9 32 91-122 195-226 (758)
314 2ffh_A Protein (FFH); SRP54, s 91.3 0.15 5.1E-06 44.2 3.8 27 96-122 97-123 (425)
315 3hjn_A DTMP kinase, thymidylat 91.2 0.14 4.7E-06 39.4 3.2 23 100-122 3-25 (197)
316 1pui_A ENGB, probable GTP-bind 91.2 0.071 2.4E-06 40.2 1.5 27 95-121 24-50 (210)
317 4f4c_A Multidrug resistance pr 91.2 0.059 2E-06 52.9 1.3 32 95-127 1103-1134(1321)
318 2gj8_A MNME, tRNA modification 91.2 0.13 4.3E-06 38.0 2.8 25 96-120 3-27 (172)
319 1tue_A Replication protein E1; 91.1 0.13 4.3E-06 40.6 2.9 36 87-122 47-83 (212)
320 1ek0_A Protein (GTP-binding pr 91.1 0.13 4.5E-06 36.8 2.9 21 99-119 5-25 (170)
321 3ozx_A RNAse L inhibitor; ATP 91.1 0.066 2.3E-06 47.8 1.4 28 95-122 292-319 (538)
322 2wji_A Ferrous iron transport 91.0 0.13 4.3E-06 37.5 2.7 21 99-119 5-25 (165)
323 1kao_A RAP2A; GTP-binding prot 91.0 0.14 4.7E-06 36.5 2.8 21 99-119 5-25 (167)
324 1ky3_A GTP-binding protein YPT 91.0 0.13 4.6E-06 37.3 2.8 22 98-119 9-30 (182)
325 3hu3_A Transitional endoplasmi 91.0 0.14 4.7E-06 45.1 3.3 27 95-121 236-262 (489)
326 1c1y_A RAS-related protein RAP 91.0 0.14 4.8E-06 36.6 2.9 21 99-119 5-25 (167)
327 1m2o_B GTP-binding protein SAR 91.0 0.13 4.4E-06 38.5 2.7 24 96-119 22-45 (190)
328 3ch4_B Pmkase, phosphomevalona 90.9 0.13 4.5E-06 40.2 2.8 23 99-121 13-35 (202)
329 1z0j_A RAB-22, RAS-related pro 90.8 0.14 4.9E-06 36.7 2.8 21 99-119 8-28 (170)
330 3hdt_A Putative kinase; struct 90.8 0.14 4.9E-06 40.3 3.0 26 97-122 14-39 (223)
331 2c9o_A RUVB-like 1; hexameric 90.8 0.38 1.3E-05 41.5 5.9 26 97-122 63-88 (456)
332 1z08_A RAS-related protein RAB 90.8 0.15 5E-06 36.7 2.8 21 99-119 8-28 (170)
333 1j8m_F SRP54, signal recogniti 90.8 0.18 6.1E-06 41.4 3.6 26 97-122 98-123 (297)
334 2wjg_A FEOB, ferrous iron tran 90.8 0.13 4.6E-06 37.8 2.7 21 99-119 9-29 (188)
335 1ypw_A Transitional endoplasmi 90.7 0.14 4.7E-06 47.8 3.2 27 95-121 236-262 (806)
336 3bk7_A ABC transporter ATP-bin 90.7 0.14 4.6E-06 46.4 3.1 28 95-122 115-142 (607)
337 2ged_A SR-beta, signal recogni 90.6 0.15 5.1E-06 37.8 2.8 21 99-119 50-70 (193)
338 1wms_A RAB-9, RAB9, RAS-relate 90.5 0.16 5.4E-06 36.9 2.8 21 99-119 9-29 (177)
339 2fn4_A P23, RAS-related protei 90.5 0.14 4.6E-06 37.2 2.5 22 99-120 11-32 (181)
340 4hlc_A DTMP kinase, thymidylat 90.5 0.17 5.8E-06 39.2 3.1 25 98-122 3-27 (205)
341 2zan_A Vacuolar protein sortin 90.4 0.16 5.6E-06 43.8 3.3 26 96-121 166-191 (444)
342 3lda_A DNA repair protein RAD5 90.4 0.14 4.8E-06 44.0 2.8 23 96-118 177-199 (400)
343 2fh5_B SR-beta, signal recogni 90.4 0.18 6.1E-06 38.1 3.1 24 96-119 6-29 (214)
344 1z0f_A RAB14, member RAS oncog 90.3 0.17 5.8E-06 36.6 2.9 21 99-119 17-37 (179)
345 1r2q_A RAS-related protein RAB 90.3 0.17 5.9E-06 36.1 2.9 21 99-119 8-28 (170)
346 2www_A Methylmalonic aciduria 90.3 0.26 8.8E-06 41.2 4.3 26 97-122 74-99 (349)
347 2b8t_A Thymidine kinase; deoxy 90.3 0.25 8.6E-06 39.0 3.9 27 96-122 11-37 (223)
348 2a9k_A RAS-related protein RAL 90.2 0.17 5.9E-06 36.8 2.9 21 99-119 20-40 (187)
349 1g16_A RAS-related protein SEC 90.2 0.15 5.2E-06 36.5 2.5 21 99-119 5-25 (170)
350 2erx_A GTP-binding protein DI- 90.2 0.17 5.7E-06 36.3 2.7 21 99-119 5-25 (172)
351 3bc1_A RAS-related protein RAB 90.2 0.18 6E-06 37.0 2.9 21 99-119 13-33 (195)
352 3clv_A RAB5 protein, putative; 90.1 0.18 6E-06 37.2 2.8 22 99-120 9-30 (208)
353 1h65_A Chloroplast outer envel 90.1 0.4 1.4E-05 38.1 5.2 44 76-119 17-61 (270)
354 2zts_A Putative uncharacterize 90.1 0.19 6.7E-06 38.7 3.2 25 96-120 29-53 (251)
355 3con_A GTPase NRAS; structural 90.1 0.18 6.2E-06 37.2 2.9 21 99-119 23-43 (190)
356 2ce7_A Cell division protein F 90.1 0.22 7.5E-06 43.8 3.8 27 96-122 48-74 (476)
357 1qvr_A CLPB protein; coiled co 90.1 0.2 6.8E-06 46.8 3.7 32 91-122 185-216 (854)
358 1upt_A ARL1, ADP-ribosylation 90.1 0.19 6.4E-06 36.2 2.9 22 98-119 8-29 (171)
359 1r8s_A ADP-ribosylation factor 90.0 0.19 6.5E-06 35.9 2.9 21 99-119 2-22 (164)
360 1tq4_A IIGP1, interferon-induc 90.0 0.3 1E-05 42.1 4.6 27 96-122 68-94 (413)
361 3ihw_A Centg3; RAS, centaurin, 89.9 0.19 6.3E-06 37.5 2.8 21 99-119 22-42 (184)
362 2qnr_A Septin-2, protein NEDD5 89.9 0.14 4.7E-06 42.0 2.2 23 98-120 19-41 (301)
363 4dsu_A GTPase KRAS, isoform 2B 89.9 0.19 6.5E-06 36.8 2.8 21 99-119 6-26 (189)
364 2nzj_A GTP-binding protein REM 89.9 0.18 6.1E-06 36.4 2.7 21 99-119 6-26 (175)
365 2gno_A DNA polymerase III, gam 89.9 0.39 1.3E-05 39.5 5.0 34 87-120 8-41 (305)
366 3kkq_A RAS-related protein M-R 89.8 0.2 6.7E-06 36.7 2.9 21 99-119 20-40 (183)
367 3lxx_A GTPase IMAP family memb 89.8 0.17 5.9E-06 39.3 2.7 22 98-119 30-51 (239)
368 3pqc_A Probable GTP-binding pr 89.7 0.16 5.3E-06 37.4 2.2 21 99-119 25-45 (195)
369 2efe_B Small GTP-binding prote 89.7 0.2 6.9E-06 36.4 2.8 21 99-119 14-34 (181)
370 2g6b_A RAS-related protein RAB 89.7 0.21 7E-06 36.3 2.9 21 99-119 12-32 (180)
371 2gf0_A GTP-binding protein DI- 89.7 0.23 8E-06 36.7 3.2 25 95-119 6-30 (199)
372 2lkc_A Translation initiation 89.7 0.19 6.5E-06 36.4 2.6 24 96-119 7-30 (178)
373 1tf7_A KAIC; homohexamer, hexa 89.6 0.21 7.2E-06 44.0 3.4 28 95-122 279-306 (525)
374 2qag_C Septin-7; cell cycle, c 89.6 0.15 5.2E-06 44.0 2.4 24 98-121 32-55 (418)
375 2dhr_A FTSH; AAA+ protein, hex 89.6 0.21 7.1E-06 44.2 3.3 25 97-121 64-88 (499)
376 2bov_A RAla, RAS-related prote 89.6 0.21 7.1E-06 37.2 2.9 21 99-119 16-36 (206)
377 3ux8_A Excinuclease ABC, A sub 89.5 0.12 4.2E-06 46.9 1.8 24 95-118 346-369 (670)
378 3q85_A GTP-binding protein REM 89.5 0.2 6.9E-06 36.0 2.7 20 99-118 4-23 (169)
379 2oil_A CATX-8, RAS-related pro 89.5 0.21 7.3E-06 37.0 2.9 21 99-119 27-47 (193)
380 2bme_A RAB4A, RAS-related prot 89.5 0.18 6.3E-06 36.9 2.5 21 99-119 12-32 (186)
381 1yqt_A RNAse L inhibitor; ATP- 89.5 0.19 6.4E-06 44.7 2.9 27 96-122 311-337 (538)
382 2r44_A Uncharacterized protein 89.5 0.14 4.7E-06 41.9 1.9 25 98-122 47-71 (331)
383 2y8e_A RAB-protein 6, GH09086P 89.4 0.19 6.5E-06 36.3 2.5 21 99-119 16-36 (179)
384 4f4c_A Multidrug resistance pr 89.4 0.11 3.8E-06 51.0 1.5 28 95-122 442-469 (1321)
385 3bk7_A ABC transporter ATP-bin 89.4 0.19 6.5E-06 45.4 2.9 28 95-122 380-407 (607)
386 1yrb_A ATP(GTP)binding protein 89.4 0.32 1.1E-05 38.0 3.9 27 96-122 13-39 (262)
387 2v3c_C SRP54, signal recogniti 89.3 0.24 8.2E-06 42.9 3.4 26 97-122 99-124 (432)
388 1z06_A RAS-related protein RAB 89.3 0.22 7.6E-06 36.8 2.8 22 98-119 21-42 (189)
389 3p32_A Probable GTPase RV1496/ 89.3 0.69 2.3E-05 38.6 6.1 41 82-122 63-104 (355)
390 1nrj_B SR-beta, signal recogni 89.2 0.3 1E-05 37.0 3.5 26 96-121 11-36 (218)
391 2xxa_A Signal recognition part 89.2 0.31 1E-05 42.2 4.0 27 96-122 99-125 (433)
392 3g5u_A MCG1178, multidrug resi 89.2 0.11 3.9E-06 50.8 1.3 28 95-122 414-441 (1284)
393 1svi_A GTP-binding protein YSX 89.2 0.18 6.2E-06 37.3 2.2 23 97-119 23-45 (195)
394 3j16_B RLI1P; ribosome recycli 89.2 0.22 7.6E-06 45.0 3.2 25 98-122 379-403 (608)
395 3tkl_A RAS-related protein RAB 89.1 0.23 8E-06 36.6 2.9 21 99-119 18-38 (196)
396 2a5j_A RAS-related protein RAB 89.1 0.24 8.2E-06 36.8 2.9 21 99-119 23-43 (191)
397 1mh1_A RAC1; GTP-binding, GTPa 89.1 0.24 8.2E-06 36.1 2.9 21 99-119 7-27 (186)
398 1t9h_A YLOQ, probable GTPase E 89.0 0.089 3E-06 43.6 0.4 31 92-122 168-198 (307)
399 2p67_A LAO/AO transport system 89.0 0.5 1.7E-05 39.2 5.1 38 85-122 43-81 (341)
400 1w36_D RECD, exodeoxyribonucle 89.0 0.42 1.4E-05 43.0 4.8 27 96-122 163-189 (608)
401 2orw_A Thymidine kinase; TMTK, 89.0 0.31 1.1E-05 36.9 3.5 23 97-119 3-25 (184)
402 1qvr_A CLPB protein; coiled co 89.0 0.26 8.8E-06 46.1 3.5 25 98-122 589-613 (854)
403 2xau_A PRE-mRNA-splicing facto 89.0 0.56 1.9E-05 43.5 5.8 60 51-118 71-130 (773)
404 3pxi_A Negative regulator of g 88.9 0.25 8.5E-06 45.4 3.4 24 99-122 523-546 (758)
405 2hxs_A RAB-26, RAS-related pro 88.9 0.21 7.2E-06 36.2 2.4 21 99-119 8-28 (178)
406 2cxx_A Probable GTP-binding pr 88.9 0.19 6.7E-06 36.8 2.2 21 99-119 3-23 (190)
407 3bwd_D RAC-like GTP-binding pr 88.9 0.26 8.7E-06 35.9 2.9 22 98-119 9-30 (182)
408 1vg8_A RAS-related protein RAB 88.9 0.25 8.5E-06 36.9 2.8 21 99-119 10-30 (207)
409 3q72_A GTP-binding protein RAD 88.8 0.19 6.6E-06 36.0 2.1 21 99-119 4-24 (166)
410 3bh0_A DNAB-like replicative h 88.8 0.35 1.2E-05 39.7 3.9 28 95-122 66-93 (315)
411 2gf9_A RAS-related protein RAB 88.7 0.26 8.9E-06 36.4 2.9 21 99-119 24-44 (189)
412 3e1s_A Exodeoxyribonuclease V, 88.7 0.45 1.5E-05 42.6 4.8 27 96-122 203-229 (574)
413 1zj6_A ADP-ribosylation factor 88.7 0.56 1.9E-05 34.5 4.7 25 94-118 13-37 (187)
414 2p5s_A RAS and EF-hand domain 88.7 0.26 9E-06 36.8 2.9 23 97-119 28-50 (199)
415 1x3s_A RAS-related protein RAB 88.6 0.27 9.1E-06 36.2 2.9 21 99-119 17-37 (195)
416 1m7b_A RND3/RHOE small GTP-bin 88.6 0.23 7.9E-06 36.6 2.5 21 99-119 9-29 (184)
417 3tw8_B RAS-related protein RAB 88.6 0.23 8E-06 35.9 2.5 21 99-119 11-31 (181)
418 3def_A T7I23.11 protein; chlor 88.6 0.69 2.3E-05 36.6 5.4 34 86-119 24-58 (262)
419 3szr_A Interferon-induced GTP- 88.5 0.2 7E-06 45.1 2.5 23 100-122 48-70 (608)
420 2atv_A RERG, RAS-like estrogen 88.5 0.27 9.3E-06 36.6 2.8 24 96-119 27-50 (196)
421 1ksh_A ARF-like protein 2; sma 88.4 0.28 9.6E-06 36.0 2.8 25 95-119 16-40 (186)
422 3c5c_A RAS-like protein 12; GD 88.4 0.28 9.6E-06 36.4 2.8 22 98-119 22-43 (187)
423 3reg_A RHO-like small GTPase; 88.4 0.28 9.7E-06 36.4 2.9 21 99-119 25-45 (194)
424 1r6b_X CLPA protein; AAA+, N-t 88.3 0.36 1.2E-05 44.3 4.0 25 98-122 489-513 (758)
425 3t5g_A GTP-binding protein RHE 88.3 0.25 8.7E-06 36.0 2.5 21 99-119 8-28 (181)
426 2iw3_A Elongation factor 3A; a 88.2 0.27 9.2E-06 47.0 3.2 25 95-119 459-483 (986)
427 2iwr_A Centaurin gamma 1; ANK 88.2 0.24 8.2E-06 36.0 2.3 21 99-119 9-29 (178)
428 1f6b_A SAR1; gtpases, N-termin 88.2 0.35 1.2E-05 36.3 3.3 31 88-118 16-46 (198)
429 1zd9_A ADP-ribosylation factor 88.2 0.3 1E-05 36.2 2.9 21 99-119 24-44 (188)
430 2fg5_A RAB-22B, RAS-related pr 88.1 0.25 8.7E-06 36.7 2.5 21 99-119 25-45 (192)
431 1v5w_A DMC1, meiotic recombina 88.1 0.32 1.1E-05 40.5 3.3 26 95-120 120-145 (343)
432 2xtp_A GTPase IMAP family memb 88.0 0.23 8E-06 39.0 2.3 24 97-120 22-45 (260)
433 1qhl_A Protein (cell division 88.0 0.15 5.3E-06 40.3 1.2 23 100-122 30-52 (227)
434 1u0j_A DNA replication protein 88.0 0.75 2.6E-05 37.4 5.3 36 86-121 91-128 (267)
435 1moz_A ARL1, ADP-ribosylation 88.0 0.24 8.3E-06 36.1 2.2 24 95-118 16-39 (183)
436 1zbd_A Rabphilin-3A; G protein 87.9 0.29 9.9E-06 36.5 2.7 21 99-119 10-30 (203)
437 3oes_A GTPase rhebl1; small GT 87.9 0.27 9.2E-06 36.9 2.5 22 98-119 25-46 (201)
438 3g5u_A MCG1178, multidrug resi 87.9 0.18 6E-06 49.5 1.7 28 95-122 1057-1084(1284)
439 2ew1_A RAS-related protein RAB 87.9 0.27 9.2E-06 37.3 2.5 21 99-119 28-48 (201)
440 3dz8_A RAS-related protein RAB 87.8 0.28 9.4E-06 36.4 2.5 22 99-120 25-46 (191)
441 3t1o_A Gliding protein MGLA; G 87.8 0.32 1.1E-05 35.7 2.9 21 99-119 16-36 (198)
442 2r6a_A DNAB helicase, replicat 87.8 0.41 1.4E-05 41.3 3.9 27 96-122 202-228 (454)
443 3hr8_A Protein RECA; alpha and 87.8 0.37 1.3E-05 40.7 3.5 27 96-122 60-86 (356)
444 2zr9_A Protein RECA, recombina 87.6 0.37 1.3E-05 40.4 3.4 27 96-122 60-86 (349)
445 2bcg_Y Protein YP2, GTP-bindin 87.5 0.29 1E-05 36.7 2.5 21 99-119 10-30 (206)
446 2j37_W Signal recognition part 87.5 0.82 2.8E-05 40.4 5.6 26 97-122 101-126 (504)
447 2fz4_A DNA repair protein RAD2 87.4 0.38 1.3E-05 37.7 3.2 33 86-121 100-132 (237)
448 3cph_A RAS-related protein SEC 87.3 0.36 1.2E-05 36.2 2.9 21 99-119 22-42 (213)
449 1zcb_A G alpha I/13; GTP-bindi 87.3 0.38 1.3E-05 40.6 3.3 23 95-117 31-53 (362)
450 2fv8_A H6, RHO-related GTP-bin 87.3 0.3 1E-05 36.8 2.5 22 98-119 26-47 (207)
451 2o52_A RAS-related protein RAB 87.0 0.3 1E-05 36.7 2.3 21 99-119 27-47 (200)
452 1fzq_A ADP-ribosylation factor 87.0 0.29 9.8E-06 36.2 2.1 22 98-119 17-38 (181)
453 2q3h_A RAS homolog gene family 87.0 0.36 1.2E-05 36.0 2.7 22 98-119 21-42 (201)
454 2il1_A RAB12; G-protein, GDP, 86.9 0.34 1.2E-05 36.1 2.5 21 99-119 28-48 (192)
455 2z43_A DNA repair and recombin 86.9 0.35 1.2E-05 39.8 2.8 28 95-122 105-132 (324)
456 4bas_A ADP-ribosylation factor 86.8 0.27 9.4E-06 36.3 2.0 22 98-119 18-39 (199)
457 1gwn_A RHO-related GTP-binding 86.8 0.33 1.1E-05 36.8 2.5 21 99-119 30-50 (205)
458 4aby_A DNA repair protein RECN 86.7 0.15 5E-06 43.1 0.4 23 99-121 62-84 (415)
459 2atx_A Small GTP binding prote 86.7 0.35 1.2E-05 35.8 2.5 21 99-119 20-40 (194)
460 3b6e_A Interferon-induced heli 86.6 0.43 1.5E-05 35.8 3.0 34 86-122 40-73 (216)
461 4b4t_K 26S protease regulatory 86.6 0.52 1.8E-05 40.8 3.8 28 95-122 204-231 (428)
462 2f7s_A C25KG, RAS-related prot 86.5 0.39 1.3E-05 36.3 2.7 21 99-119 27-47 (217)
463 2i1q_A DNA repair and recombin 86.5 0.4 1.4E-05 39.2 2.9 26 95-120 96-121 (322)
464 2cjw_A GTP-binding protein GEM 86.5 0.42 1.4E-05 35.8 2.9 21 99-119 8-28 (192)
465 2h17_A ADP-ribosylation factor 86.4 0.3 1E-05 35.8 2.0 22 98-119 22-43 (181)
466 1wb9_A DNA mismatch repair pro 86.4 0.41 1.4E-05 44.7 3.3 26 96-121 606-631 (800)
467 3lxw_A GTPase IMAP family memb 86.4 0.39 1.3E-05 37.9 2.7 24 96-119 20-43 (247)
468 2r2a_A Uncharacterized protein 86.4 0.42 1.4E-05 36.9 2.8 20 99-118 7-26 (199)
469 3cbq_A GTP-binding protein REM 86.3 0.31 1E-05 36.7 2.0 20 99-118 25-44 (195)
470 2qu8_A Putative nucleolar GTP- 86.2 0.33 1.1E-05 37.3 2.2 22 98-119 30-51 (228)
471 2fu5_C RAS-related protein RAB 86.2 0.23 8E-06 36.3 1.2 21 99-119 10-30 (183)
472 3qf7_A RAD50; ABC-ATPase, ATPa 86.2 0.38 1.3E-05 40.5 2.7 24 99-122 25-48 (365)
473 2gco_A H9, RHO-related GTP-bin 86.1 0.39 1.3E-05 36.0 2.5 21 99-119 27-47 (201)
474 1sky_E F1-ATPase, F1-ATP synth 86.0 0.61 2.1E-05 41.0 4.0 42 81-122 135-176 (473)
475 2j1l_A RHO-related GTP-binding 86.0 0.36 1.2E-05 36.7 2.3 21 99-119 36-56 (214)
476 1e9r_A Conjugal transfer prote 86.0 0.36 1.2E-05 41.1 2.5 27 96-122 52-78 (437)
477 1g41_A Heat shock protein HSLU 85.9 0.43 1.5E-05 41.6 3.0 26 97-122 50-75 (444)
478 3l0o_A Transcription terminati 85.9 0.94 3.2E-05 39.2 5.0 43 80-122 158-200 (427)
479 2hup_A RAS-related protein RAB 85.8 0.41 1.4E-05 36.0 2.5 21 99-119 31-51 (201)
480 3q3j_B RHO-related GTP-binding 85.8 0.47 1.6E-05 36.1 2.9 21 99-119 29-49 (214)
481 3cpj_B GTP-binding protein YPT 85.7 0.48 1.6E-05 36.2 2.9 21 99-119 15-35 (223)
482 1e69_A Chromosome segregation 85.7 0.42 1.4E-05 39.2 2.7 22 99-120 26-47 (322)
483 1c9k_A COBU, adenosylcobinamid 85.7 0.39 1.3E-05 36.7 2.3 20 100-119 2-21 (180)
484 2gxq_A Heat resistant RNA depe 85.6 0.73 2.5E-05 34.4 3.8 25 98-122 39-64 (207)
485 3gbj_A KIF13B protein; kinesin 85.6 0.88 3E-05 38.4 4.7 36 79-114 75-110 (354)
486 4b4t_L 26S protease subunit RP 85.6 0.63 2.2E-05 40.4 3.8 28 95-122 213-240 (437)
487 1xx6_A Thymidine kinase; NESG, 85.6 0.69 2.4E-05 35.4 3.7 25 96-120 7-31 (191)
488 2j0v_A RAC-like GTP-binding pr 85.6 0.42 1.4E-05 35.9 2.5 21 99-119 11-31 (212)
489 4gzl_A RAS-related C3 botulinu 85.6 0.53 1.8E-05 35.5 3.0 24 96-119 29-52 (204)
490 1qde_A EIF4A, translation init 85.5 0.87 3E-05 34.6 4.3 34 86-122 43-77 (224)
491 3t5d_A Septin-7; GTP-binding p 85.5 0.32 1.1E-05 38.9 1.8 20 99-118 10-29 (274)
492 1ewq_A DNA mismatch repair pro 85.5 0.46 1.6E-05 44.1 3.1 25 97-121 576-600 (765)
493 1f2t_A RAD50 ABC-ATPase; DNA d 85.5 0.59 2E-05 34.1 3.1 26 97-122 23-48 (149)
494 1u94_A RECA protein, recombina 85.4 0.65 2.2E-05 39.1 3.8 27 96-122 62-88 (356)
495 3dc4_A Kinesin-like protein NO 85.3 0.88 3E-05 38.2 4.5 22 93-114 91-112 (344)
496 4b4t_M 26S protease regulatory 85.2 0.68 2.3E-05 40.2 3.8 28 95-122 213-240 (434)
497 1bg2_A Kinesin; motor protein, 85.1 0.93 3.2E-05 37.8 4.5 22 93-114 74-95 (325)
498 1ry6_A Internal kinesin; kines 85.0 0.75 2.6E-05 38.9 3.9 37 78-114 65-102 (360)
499 2iw3_A Elongation factor 3A; a 85.0 0.33 1.1E-05 46.4 1.9 28 95-122 697-724 (986)
500 4i1u_A Dephospho-COA kinase; s 85.0 0.59 2E-05 36.6 3.1 22 98-119 10-31 (210)
No 1
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=100.00 E-value=3.8e-62 Score=448.72 Aligned_cols=176 Identities=47% Similarity=0.856 Sum_probs=167.9
Q ss_pred CCCCCCccCCCCCCHHHHHHHHHHHHhcCCccccccceEEEeCCCCCCCCCCHHHHHHHhcCCCCCCCchHHHhHHHHHH
Q psy18111 10 ETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTRGPFQLPPHIFAIAGSAYR 89 (186)
Q Consensus 10 ~~~~~Dl~~L~~l~e~~il~~L~~Ry~~~~iyT~~g~~Li~vNP~~~l~~y~~~~~~~y~~~~~~~~~PHi~~~a~~a~~ 89 (186)
..++|||+.|+++||++||++|+.||..++||||+|++||+||||+.+|+|+++++..|+++.+.++|||||++|++||+
T Consensus 7 ~~~~~Dl~~L~~l~E~~vl~nL~~Ry~~~~IYTy~G~iLiavNPyk~l~iY~~~~~~~Y~g~~~~~~pPHifaiA~~Ay~ 86 (697)
T 1lkx_A 7 AEGVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYKESDIKAYNGRYKYEMPPHMYALANDAYR 86 (697)
T ss_dssp --CCSSGGGCSSCSHHHHHHHHHHHHHTTCCEEESSSCEEEECCSSCCSCCSHHHHHHHSSCCGGGSCCCHHHHHHHHHH
T ss_pred ccCCcccccCCCCCHHHHHHHHHHHHhcCCcEEeeCCeEEEEcCCcCCCCCCHHHHHHHhCCCCCCCCchHHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCeEEEecCCCCCchhHHHHHHHHHHhhhcCC-CCCchhhHHHHHhhccchHHhhcCccccCCCCCCCceeeEE
Q psy18111 90 WLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPG-TGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLD 168 (186)
Q Consensus 90 ~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~-~~~~~~~~~~~i~~~~~iLeaFgnakT~~N~nSSR~gk~~~ 168 (186)
+|+..++|||||++|||||||||++|++++||+ .+++ .+.....++++|+++||||||||||||++|+||||||||++
T Consensus 87 ~m~~~~~nQsIiisGESGAGKTe~tK~i~~yla-~~~~~~~~~~~~i~~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~ 165 (697)
T 1lkx_A 87 SMRQSQENQCVIISGESGAGKTEASKKIMQFLT-FVSSNQSPNGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYME 165 (697)
T ss_dssp HHHHHCCCEEEEEECSTTSSHHHHHHHHHHHHH-HHSCSSCHHHHHHHHHHHHHHHHHHHHHBBCCSSCSSCBCSEEEEE
T ss_pred HHHhcCCCcEEEecCCCCCCchhhHHHHHHHHH-hhcCCCCCccccHHHHHHhcchHHHHhcCcccCCCCCcchhheeEE
Confidence 999999999999999999999999999999999 7776 33345689999999999999999999999999999999999
Q ss_pred EEEcCCCCeeeeEecccC
Q psy18111 169 IEFDYKGDPLGAHITNCK 186 (186)
Q Consensus 169 l~f~~~g~i~ga~i~~y~ 186 (186)
|+|+.+|.|+||+|++||
T Consensus 166 i~F~~~g~i~Ga~I~~yL 183 (697)
T 1lkx_A 166 MQFNAVGSPIGGKITNYL 183 (697)
T ss_dssp EEECTTCCEEEEEEEEEC
T ss_pred EEECCCCCEeeeeeeeee
Confidence 999999999999999997
No 2
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=100.00 E-value=4.4e-62 Score=452.20 Aligned_cols=176 Identities=40% Similarity=0.632 Sum_probs=167.5
Q ss_pred CCCCCCccCCCCCCHHHHHHHHHHHHhcCCccccccceEEEeCCCCCCCCCCHHHHHHHhcCCCCCCCchHHHhHHHHHH
Q psy18111 10 ETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTRGPFQLPPHIFAIAGSAYR 89 (186)
Q Consensus 10 ~~~~~Dl~~L~~l~e~~il~~L~~Ry~~~~iyT~~g~~Li~vNP~~~l~~y~~~~~~~y~~~~~~~~~PHi~~~a~~a~~ 89 (186)
..++|||+.|++|||++||++|+.||.+++||||+|++||+||||+.+|+|+++++..|+++.+.++|||||++|+.||+
T Consensus 84 ~~~~eDl~~L~~LnE~svL~nL~~Ry~~~~IYTy~G~iLvavNPyk~l~iY~~~~~~~Y~g~~~~~~pPHifaiA~~Ay~ 163 (783)
T 4db1_A 84 FDKIEDMAMLTFLHEPAVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLPVYTPEVVAAYRGKKRSEAPPHIFSISDNAYQ 163 (783)
T ss_dssp GTTCSBGGGCSCCSHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCSCSSHHHHHHHTTCCGGGSCCCHHHHHHHHHH
T ss_pred cCCcchhhccccccHHHHHHHHHHHhcCCceEEecCceeEecCCCccCCCCCHHHHHHhcCCCcCCCCchhhHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCeEEEecCCCCCchhHHHHHHHHHHhhhcCCCCCc--------hhhHHHHHhhccchHHhhcCccccCCCCCC
Q psy18111 90 WLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGPV--------LNAVREKLKHIGPLLEAFGNAQTLKNDNSS 161 (186)
Q Consensus 90 ~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~~~~~--------~~~~~~~i~~~~~iLeaFgnakT~~N~nSS 161 (186)
+|+..+++||||++|||||||||++|++++||+ .+++.+.. ...++++|+++||||||||||||++|+|||
T Consensus 164 ~m~~~~~nQsIiiSGESGAGKTe~tK~im~yla-~v~~~~~~~~~~~~~~~~~ve~~il~snpiLEAFGNAkT~rNdNSS 242 (783)
T 4db1_A 164 YMLTDRENQSILITGESGAGKTVNTKRVIQYFA-VIAAIGDRSKKDQSPGKGTLEDQIIQANPALEAFGNAKTVRNDNSS 242 (783)
T ss_dssp HHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHH-HHSBCCCC-------CCSCHHHHHHHHHHHHHHHHEECCSSCTTEE
T ss_pred HHHhhCCCceEEEeCCCCCCCchHHHHHHHhhh-hhccCCCccccccccccccHHHHHHHhHHHHHhccCcccCCCCCCC
Confidence 999999999999999999999999999999999 76653321 256899999999999999999999999999
Q ss_pred CceeeEEEEEcCCCCeeeeEecccC
Q psy18111 162 RFGKYLDIEFDYKGDPLGAHITNCK 186 (186)
Q Consensus 162 R~gk~~~l~f~~~g~i~ga~i~~y~ 186 (186)
|||||++|+|+.+|.|+||+|++||
T Consensus 243 RFGK~i~i~F~~~g~i~Ga~I~~YL 267 (783)
T 4db1_A 243 RFGKFIRIHFGATGKLASADIETYL 267 (783)
T ss_dssp CSEEEEEEEECTTSBEEEEEEEEEC
T ss_pred ccceeEEEEECCCCCEeeeEEEEee
Confidence 9999999999999999999999997
No 3
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=100.00 E-value=1.2e-61 Score=460.03 Aligned_cols=175 Identities=42% Similarity=0.742 Sum_probs=166.0
Q ss_pred CCCCCCCCccCCCCCCHHHHHHHHHHHHhcCCccccccceEEEeCCCCCCC-CCCHHHHHHHhcCCCCCCCchHHHhHHH
Q psy18111 8 DSETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLN-IYSAELARAYRTRGPFQLPPHIFAIAGS 86 (186)
Q Consensus 8 ~~~~~~~Dl~~L~~l~e~~il~~L~~Ry~~~~iyT~~g~~Li~vNP~~~l~-~y~~~~~~~y~~~~~~~~~PHi~~~a~~ 86 (186)
+...++|||+.|++|||++||++|+.||.+++||||+|++||+||||+.+| +|+++++..|+++.+.++|||||++|+.
T Consensus 54 ~~~~~veDl~~L~~LnE~svL~nL~~Ry~~~~IYTy~G~iLIaVNPyk~lp~iY~~~~~~~Y~g~~~~~lpPHIfaiA~~ 133 (1052)
T 4anj_A 54 DSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADK 133 (1052)
T ss_dssp CSSCCCSBGGGSSSCSHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCTTTTSHHHHHHHTTCCBTTBCSCHHHHHHH
T ss_pred CccCCCcccccCCCCCHHHHHHHHHHHHcCCCcEEeECCEEEEECCCCCccccCCHHHHHHhcCCCCCCCCCcHHHHHHH
Confidence 445689999999999999999999999999999999999999999999997 9999999999999999999999999999
Q ss_pred HHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHhhhcCCCCCchhhHHHHHhhccchHHhhcCccccCCCCCCCceee
Q psy18111 87 AYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKY 166 (186)
Q Consensus 87 a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~~~~~~~~~~~~i~~~~~iLeaFgnakT~~N~nSSR~gk~ 166 (186)
||++|+..++|||||++|||||||||++|++++||+ ..++++ ..++++|+++||||||||||||.+|+||||||||
T Consensus 134 AY~~M~~~~~nQsIiiSGESGAGKTestK~im~yLa-~~~~~~---~~ie~~Il~snpiLEAFGNAKT~rNdNSSRFGK~ 209 (1052)
T 4anj_A 134 AFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT-ESYGTG---QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKF 209 (1052)
T ss_dssp HHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHH-HHHCC------CTTHHHHTHHHHHHHHEECCSSCTTEESSEEE
T ss_pred HHHHHHHhCCCceEEEecCCCCCHHHHHHHHHHHHH-HhcCCC---ccHHHHHHHHHHHHHhccCCCCCCCCCcCCceeE
Confidence 999999999999999999999999999999999999 666543 3578999999999999999999999999999999
Q ss_pred EEEEEcCCCCeeeeEecccC
Q psy18111 167 LDIEFDYKGDPLGAHITNCK 186 (186)
Q Consensus 167 ~~l~f~~~g~i~ga~i~~y~ 186 (186)
++|+|+.+|.|+||+|++||
T Consensus 210 iel~F~~~G~i~Ga~I~~YL 229 (1052)
T 4anj_A 210 VEIHFNEKSSVVGGFVSHYL 229 (1052)
T ss_dssp EEEEECTTSCEEEEEEEEEC
T ss_pred EEEEECCCCCEEEEEEeccc
Confidence 99999999999999999997
No 4
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=100.00 E-value=2.4e-61 Score=448.49 Aligned_cols=174 Identities=41% Similarity=0.675 Sum_probs=167.6
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHH-hcCCccccccceEEEeCCCCCCCCCCHHHHHHHhcCCCCCCCchHHHhHHHHHH
Q psy18111 11 TGAWDCVLLDPLSEDTFISNLHLRY-KRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTRGPFQLPPHIFAIAGSAYR 89 (186)
Q Consensus 11 ~~~~Dl~~L~~l~e~~il~~L~~Ry-~~~~iyT~~g~~Li~vNP~~~l~~y~~~~~~~y~~~~~~~~~PHi~~~a~~a~~ 89 (186)
.++|||+.|+++||++||++|+.|| ..++||||+|++||+||||+.+|+|+++++..|+++.+.++|||||++|++||+
T Consensus 69 ~~~~Dl~~L~~l~E~svL~nL~~Ry~~~~~IYTy~G~iLiavNPyk~l~iY~~~~~~~Y~g~~~~~~pPHifaiA~~Ay~ 148 (795)
T 1w7j_A 69 VGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYK 148 (795)
T ss_dssp TTCSSSTTCSCCSHHHHHHHHHHHHHHHCCCEEEETTEEEEECCSSCCSCCSHHHHHHHTTCCGGGSCCCHHHHHHHHHH
T ss_pred ccccchhhhhcccHHHHHHHHHHHHHhcccchhccCcceEEecCccccCcCCHHHHHHHcCCCccCCCccHhHHHHHHHH
Confidence 6899999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCeEEEecCCCCCchhHHHHHHHHHHhhhcCCCCCchhhHHHHHhhccchHHhhcCccccCCCCCCCceeeEEE
Q psy18111 90 WLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDI 169 (186)
Q Consensus 90 ~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~~~~~~~~~~~~i~~~~~iLeaFgnakT~~N~nSSR~gk~~~l 169 (186)
+|+..++|||||++|||||||||++|++++||+ .+++... ...++++|+++||||||||||||++|+||||||||++|
T Consensus 149 ~m~~~~~nQsIiisGESGAGKTe~tK~i~~yla-~~~~~~~-~~~ie~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~i 226 (795)
T 1w7j_A 149 QMARDERNQSIIVSGESGAGKTVSAKYAMRYFA-TVSGSAS-EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEI 226 (795)
T ss_dssp HHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHH-HHTCCSS-SSCHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEEE
T ss_pred HhHhcCCCeEEEEeCCCCCCcchHHHHHHHHHH-hhcCCCC-ccchHHHHHHHHHHHHHhcCccCCCCCCccccceEEEE
Confidence 999999999999999999999999999999999 7776432 25789999999999999999999999999999999999
Q ss_pred EEcCCCCeeeeEecccC
Q psy18111 170 EFDYKGDPLGAHITNCK 186 (186)
Q Consensus 170 ~f~~~g~i~ga~i~~y~ 186 (186)
+|+.+|.|+||+|++||
T Consensus 227 ~F~~~g~i~Ga~I~~YL 243 (795)
T 1w7j_A 227 GFDKRYRIIGANMRTYL 243 (795)
T ss_dssp EECTTSCEEEEEEEEEC
T ss_pred EECCCCCEeeeeceEEe
Confidence 99999999999999997
No 5
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=100.00 E-value=3.2e-61 Score=447.44 Aligned_cols=174 Identities=41% Similarity=0.741 Sum_probs=163.4
Q ss_pred CCCCCCCccCCCCCCHHHHHHHHHHHHhcCCccccccceEEEeCCCCCC-CCCCHHHHHHHhcCCCCCCCchHHHhHHHH
Q psy18111 9 SETGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPL-NIYSAELARAYRTRGPFQLPPHIFAIAGSA 87 (186)
Q Consensus 9 ~~~~~~Dl~~L~~l~e~~il~~L~~Ry~~~~iyT~~g~~Li~vNP~~~l-~~y~~~~~~~y~~~~~~~~~PHi~~~a~~a 87 (186)
...++|||+.|++|||++||++|+.||..++||||+|++||+||||+.+ ++|+++++..|+++.+.++|||||++|++|
T Consensus 51 ~~~~~~Dl~~L~~L~E~svL~nL~~Ry~~~~IYTy~G~iLiaVNPyk~l~~iY~~~~~~~Y~g~~~~~~pPHifaiA~~A 130 (784)
T 2v26_A 51 SKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKA 130 (784)
T ss_dssp SSCCCSBGGGSSSCSHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCTTTTSHHHHHHHTTCCTTSSCSCHHHHHHHH
T ss_pred cccccchhhhhhhccHHHHHHHHHHHHhcCceeeeccceEEEecCCcCcCCCCCHHHHHHHhCCCcccCCchHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999999 699999999999999999999999999999
Q ss_pred HHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHhhhcCCCCCchhhHHHHHhhccchHHhhcCccccCCCCCCCceeeE
Q psy18111 88 YRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYL 167 (186)
Q Consensus 88 ~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~~~~~~~~~~~~i~~~~~iLeaFgnakT~~N~nSSR~gk~~ 167 (186)
|++|+..+++||||++|||||||||++|++++||+ ..++.+ ..++++|+++||||||||||||++|+||||||||+
T Consensus 131 y~~m~~~~~nQsIiiSGESGAGKTe~tK~i~~yla-~~~~~~---~~ie~~il~snpiLEAFGNAKT~rNdNSSRFGKfi 206 (784)
T 2v26_A 131 FRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT-ESYGTG---QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFV 206 (784)
T ss_dssp HHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHH-HHHC---------CHHHHTHHHHHHHHEECCSSCTTEECSEEEE
T ss_pred HHHHHhcCCCcEEEEcCCCCCCceehHHHHHHHHH-hhcCCC---CcHHHHHHHHHHHHHHhCCCcCCCCCCcchhheEE
Confidence 99999999999999999999999999999999999 665532 46889999999999999999999999999999999
Q ss_pred EEEEcCCCCeeeeEecccC
Q psy18111 168 DIEFDYKGDPLGAHITNCK 186 (186)
Q Consensus 168 ~l~f~~~g~i~ga~i~~y~ 186 (186)
+|+|+.+|.|+||+|++||
T Consensus 207 ~i~F~~~g~i~Ga~I~~YL 225 (784)
T 2v26_A 207 EIHFNEKSSVVGGFVSHYL 225 (784)
T ss_dssp EEEECTTSCEEEEEEEEEC
T ss_pred EEEEecCCcEeeeeeeeee
Confidence 9999999999999999997
No 6
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=100.00 E-value=3.4e-61 Score=445.35 Aligned_cols=175 Identities=39% Similarity=0.689 Sum_probs=166.2
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHHhcCCccccccceEEEeCCCCCCCCCCHHHHHHHhcCCCCCCCchHHHhHHHHHHH
Q psy18111 11 TGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTRGPFQLPPHIFAIAGSAYRW 90 (186)
Q Consensus 11 ~~~~Dl~~L~~l~e~~il~~L~~Ry~~~~iyT~~g~~Li~vNP~~~l~~y~~~~~~~y~~~~~~~~~PHi~~~a~~a~~~ 90 (186)
.++|||+.|+++||++||++|+.||..++||||+|++||+||||+.+|+|+++++..|+++.+.++|||||++|+.||++
T Consensus 86 ~~~~Dl~~L~~l~E~svL~nL~~Ry~~~~IYTy~G~iLvavNPyk~l~iY~~~~~~~Y~~~~~~~~pPHifaiA~~Ay~~ 165 (770)
T 1w9i_A 86 DGVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRS 165 (770)
T ss_dssp TTCSBGGGCSCCCHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCSCCSHHHHHHHTTCCGGGSCCCHHHHHHHHHHH
T ss_pred cchhhhhhhccCCHHHHHHHHHHHHhcCCceeccCceeEEecCCccccCCCHHHHHHhcCCCcCCCCccHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCeEEEecCCCCCchhHHHHHHHHHHhhhcCCCCC--chhhHHHHHhhccchHHhhcCccccCCCCCCCceeeEE
Q psy18111 91 LRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGP--VLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLD 168 (186)
Q Consensus 91 ~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~~~~--~~~~~~~~i~~~~~iLeaFgnakT~~N~nSSR~gk~~~ 168 (186)
|+..+++||||++|||||||||++|++++||+ .+++... ....++++|+++||||||||||||++|+||||||||++
T Consensus 166 m~~~~~nQsIiisGESGAGKTe~tK~i~~yla-~~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~ 244 (770)
T 1w9i_A 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLA-SVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIE 244 (770)
T ss_dssp HHHHCCCEEEEEECSTTSSHHHHHHHHHHHHH-HHHCC------CHHHHHHHHHHHHHHHHHEECCSSCTTEESSEEEEE
T ss_pred HHhhcCCcEEEEecCCCCcchHHHHHHHHHHH-HhccccCCcccCcHHHHHHHHHHHHHHhCCCcCCCCCCcCCcceEEE
Confidence 99999999999999999999999999999999 6665332 23679999999999999999999999999999999999
Q ss_pred EEEcCCCCeeeeEecccC
Q psy18111 169 IEFDYKGDPLGAHITNCK 186 (186)
Q Consensus 169 l~f~~~g~i~ga~i~~y~ 186 (186)
|+|+.+|.|+||+|++||
T Consensus 245 i~F~~~g~i~Ga~I~~yL 262 (770)
T 1w9i_A 245 IQFNSAGFISGASIQSYL 262 (770)
T ss_dssp EEECTTSCEEEEEEEEEC
T ss_pred EEECCCCCEeeeEEEEEe
Confidence 999999999999999997
No 7
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=100.00 E-value=3.3e-61 Score=449.50 Aligned_cols=175 Identities=35% Similarity=0.614 Sum_probs=167.1
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHHhcCCccccccceEEEeCCCCCCCCCCHHHHHHHhcCCCCCCCchHHHhHHHHHHH
Q psy18111 11 TGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTRGPFQLPPHIFAIAGSAYRW 90 (186)
Q Consensus 11 ~~~~Dl~~L~~l~e~~il~~L~~Ry~~~~iyT~~g~~Li~vNP~~~l~~y~~~~~~~y~~~~~~~~~PHi~~~a~~a~~~ 90 (186)
.++|||+.|+++||++||++|+.||..++||||+|++||+||||+.+|+|+++++..|+++.+.++|||||++|+.||++
T Consensus 83 ~~~~Dl~~L~~l~E~svL~nL~~Ry~~~~IYTy~G~iLiavNPyk~l~iY~~~~~~~Y~g~~~~~~pPHifaiA~~Ay~~ 162 (837)
T 1kk8_A 83 EKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQN 162 (837)
T ss_dssp TTCSBGGGSSCCSHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCSTTSHHHHHHHTTCCGGGSCCCHHHHHHHHHHH
T ss_pred cchhhhhhhhcccHHHHHHHHHHHHhcCCceeeccceeEEeCCCcCCCCCCHHHHHHhcCCCcCCCCCcHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCeEEEecCCCCCchhHHHHHHHHHHhhhcCCCCC--c-------hhhHHHHHhhccchHHhhcCccccCCCCCC
Q psy18111 91 LRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGP--V-------LNAVREKLKHIGPLLEAFGNAQTLKNDNSS 161 (186)
Q Consensus 91 ~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~~~~--~-------~~~~~~~i~~~~~iLeaFgnakT~~N~nSS 161 (186)
|+..++|||||++|||||||||++|++++||+ .+++... . ...++++|+++||||||||||||++|+|||
T Consensus 163 m~~~~~nQsIiiSGESGAGKTe~tK~i~~yla-~~~~~~~~~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rNdNSS 241 (837)
T 1kk8_A 163 MVTDRENQSCLITGESGAGKTENTKKVIMYLA-KVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSS 241 (837)
T ss_dssp HHHHTSEEEEEEECSTTSSHHHHHHHHHHHHH-HHSCCCCCC--------CCCHHHHHHHHHHHHHHHHEECCSSCTTEE
T ss_pred HHhcCCCcEEEEeCCCCCCchhhHHHHHHHHH-HhcccCCcccccccccccccHHHHHHHHHHHHHHhcCccCCCCCCCC
Confidence 99999999999999999999999999999999 7665332 1 257899999999999999999999999999
Q ss_pred CceeeEEEEEcCCCCeeeeEecccC
Q psy18111 162 RFGKYLDIEFDYKGDPLGAHITNCK 186 (186)
Q Consensus 162 R~gk~~~l~f~~~g~i~ga~i~~y~ 186 (186)
|||||++|+|+.+|.|+||+|++||
T Consensus 242 RFGKfi~i~F~~~g~i~Ga~I~~YL 266 (837)
T 1kk8_A 242 RFGKFIRIHFGPTGKIAGADIETYL 266 (837)
T ss_dssp SSEEEEEEEECTTSSEEEEEEEEEC
T ss_pred CceeEEEEEECCCCCEeeeEEEEEe
Confidence 9999999999999999999999997
No 8
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=100.00 E-value=4.6e-60 Score=449.39 Aligned_cols=175 Identities=39% Similarity=0.681 Sum_probs=167.6
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHHhcCCccccccceEEEeCCCCCCCCCCHHHHHHHhcCCCCCCCchHHHhHHHHHHH
Q psy18111 11 TGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTRGPFQLPPHIFAIAGSAYRW 90 (186)
Q Consensus 11 ~~~~Dl~~L~~l~e~~il~~L~~Ry~~~~iyT~~g~~Li~vNP~~~l~~y~~~~~~~y~~~~~~~~~PHi~~~a~~a~~~ 90 (186)
.+++||+.|+++||++||++|+.||..++||||+|++||+||||+.+|+|+++++..|+++.+.++|||||++|+.||++
T Consensus 86 ~~~~Dl~~L~~l~e~~vl~nL~~Ry~~~~iYTy~G~ilvavNPyk~l~iy~~~~~~~Y~~~~~~~~pPHifaiA~~Ay~~ 165 (1010)
T 1g8x_A 86 DGVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRS 165 (1010)
T ss_dssp TTCSBGGGCSSCCHHHHHHHHHHHHTTTCCEEEETTEEEEECCSSCCSCCSHHHHHHHTTCCTTTSCCCHHHHHHHHHHH
T ss_pred cchhhhhhhhcccHHHHHHHHHHHHhhCCceeccCceeEEecCCccccCCCHHHHHHhcCCCccCCCccHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCeEEEecCCCCCchhHHHHHHHHHHhhhcCCCCC--chhhHHHHHhhccchHHhhcCccccCCCCCCCceeeEE
Q psy18111 91 LRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGP--VLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLD 168 (186)
Q Consensus 91 ~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~~~~--~~~~~~~~i~~~~~iLeaFgnakT~~N~nSSR~gk~~~ 168 (186)
|+..++|||||++|||||||||++|.+++||+ .+++... ....++++|+++||||||||||||++|+||||||||++
T Consensus 166 m~~~~~~QsIiisGESGAGKTe~~K~i~~yla-~~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~ 244 (1010)
T 1g8x_A 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLA-SVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIE 244 (1010)
T ss_dssp HHHHTCCEEEEEEESTTSSHHHHHHHHHHHHH-HHHCCCCTTTSSHHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEE
T ss_pred HHhcCCCeEEEEeCCCCCCcchHHHHHHHHHH-HhcccCCCcccchHHHHHHHHHHHHHHhCCCcCCCCCCccccceEEE
Confidence 99999999999999999999999999999999 6665332 23689999999999999999999999999999999999
Q ss_pred EEEcCCCCeeeeEecccC
Q psy18111 169 IEFDYKGDPLGAHITNCK 186 (186)
Q Consensus 169 l~f~~~g~i~ga~i~~y~ 186 (186)
|+|+.+|.|+||+|++||
T Consensus 245 i~F~~~g~i~Ga~i~~yL 262 (1010)
T 1g8x_A 245 IQFNNAGFISGASIQSYL 262 (1010)
T ss_dssp EEECTTSCEEEEEEEEEC
T ss_pred EEECCCCCCcceEEEEEE
Confidence 999999999999999997
No 9
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=100.00 E-value=3.7e-60 Score=450.01 Aligned_cols=175 Identities=41% Similarity=0.677 Sum_probs=166.3
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHHhcCCccccccceEEEeCCCCCCCCCCHHHHHHHhcCCCCCCCchHHHhHHHHHHH
Q psy18111 11 TGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTRGPFQLPPHIFAIAGSAYRW 90 (186)
Q Consensus 11 ~~~~Dl~~L~~l~e~~il~~L~~Ry~~~~iyT~~g~~Li~vNP~~~l~~y~~~~~~~y~~~~~~~~~PHi~~~a~~a~~~ 90 (186)
.++|||+.|+++||++||++|+.||..++||||+|++||+||||+.+|+|+++++..|+++.+.++|||||++|+.||++
T Consensus 60 ~~~~Dl~~L~~l~e~~vl~nL~~Ry~~~~iYTy~G~ilvavNPyk~l~iy~~~~~~~Y~~~~~~~~pPHifaiA~~Ay~~ 139 (995)
T 2ycu_A 60 SKAEDMAELTCLNEASVLHNLRERYYSGLIYTYSGLFCVVINPYKQLPIYTEAIVEMYRGKKRHEVPPHVYAVTEGAYRS 139 (995)
T ss_dssp TTCSBGGGCSSCSHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCSCCSHHHHHHHTTCCGGGSCCCHHHHHHHHHHH
T ss_pred cccchhhhhccccHHHHHHHHHHHHhcCceeeecCceeeeeCCccccCCCCHHHHHHhcCCccCCCCchHHHHhHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCeEEEecCCCCCchhHHHHHHHHHHhhhcCCCCC--c----hhhHHHHHhhccchHHhhcCccccCCCCCCCce
Q psy18111 91 LRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGP--V----LNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFG 164 (186)
Q Consensus 91 ~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~~~~--~----~~~~~~~i~~~~~iLeaFgnakT~~N~nSSR~g 164 (186)
|+..++||||||+|||||||||++|++++||+ .+++... . ...++++|+++||||||||||||++|+||||||
T Consensus 140 m~~~~~~QsIiisGESGAGKTe~~K~i~~yla-~~~~~~~~~~~~~~~~~ie~~il~~npiLEAFGNAkT~rN~NSSRFG 218 (995)
T 2ycu_A 140 MLQDREDQSILCTGESGAGKTENTKKVIQYLA-HVASSPKGRKEPGVPGELERQLLQANPILEAFGNAKTVKNDNSSRFG 218 (995)
T ss_dssp HHHHCCCEEEEEECBTTSSHHHHHHHHHHHHH-HHSCCSSSCSSSCCCC-CCSTTTSHHHHHHHHHEECCSSCTTEESSE
T ss_pred HHhcCCCcEEEecCCCCCCchhhHHHHHHHHH-HhcccCCccccccccccHHHHHHHHHHHHHHhcCccCCCCCCCCccc
Confidence 99999999999999999999999999999999 7765432 1 257889999999999999999999999999999
Q ss_pred eeEEEEEcCCCCeeeeEecccC
Q psy18111 165 KYLDIEFDYKGDPLGAHITNCK 186 (186)
Q Consensus 165 k~~~l~f~~~g~i~ga~i~~y~ 186 (186)
||++|+|+.+|.|+||+|++||
T Consensus 219 K~i~i~F~~~g~i~Ga~i~~yL 240 (995)
T 2ycu_A 219 KFIRINFDVAGYIVGANIETYL 240 (995)
T ss_dssp EEEEEEECTTSCEEEEEEEEEC
T ss_pred eEEEEEECCCCCEeeeEEEEEe
Confidence 9999999999999999999997
No 10
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=100.00 E-value=6.6e-60 Score=451.13 Aligned_cols=174 Identities=41% Similarity=0.675 Sum_probs=167.5
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHH-hcCCccccccceEEEeCCCCCCCCCCHHHHHHHhcCCCCCCCchHHHhHHHHHH
Q psy18111 11 TGAWDCVLLDPLSEDTFISNLHLRY-KRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTRGPFQLPPHIFAIAGSAYR 89 (186)
Q Consensus 11 ~~~~Dl~~L~~l~e~~il~~L~~Ry-~~~~iyT~~g~~Li~vNP~~~l~~y~~~~~~~y~~~~~~~~~PHi~~~a~~a~~ 89 (186)
.+++||+.|+++||++||++|+.|| ..++||||+|++||+||||+.+|+|+++++..|++....++|||||++|+.||+
T Consensus 69 ~~~~Dl~~L~~l~e~~vl~nL~~Ry~~~~~iYTy~G~iLiavNPyk~l~iy~~~~~~~Y~~~~~~~~pPHifaiA~~Ay~ 148 (1080)
T 2dfs_A 69 VGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYK 148 (1080)
T ss_dssp SSCSBSTTCSSCSHHHHHHHHHHHHHTTCCCEEEETTEEEEECCSSCCSCSSHHHHHHHTTCCGGGSCCCHHHHHHHHHH
T ss_pred cchhhhhhhhhcchHHHHHHHHHHHHhcCCchhccCceeEEecCCcccccCCHHHHHHhcCCCCCCCCCcHHHHHHHHHH
Confidence 6899999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCeEEEecCCCCCchhHHHHHHHHHHhhhcCCCCCchhhHHHHHhhccchHHhhcCccccCCCCCCCceeeEEE
Q psy18111 90 WLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGPVLNAVREKLKHIGPLLEAFGNAQTLKNDNSSRFGKYLDI 169 (186)
Q Consensus 90 ~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~~~~~~~~~~~~i~~~~~iLeaFgnakT~~N~nSSR~gk~~~l 169 (186)
+|+..++|||||++|||||||||++|.+++||+ .+++... ...++++|+++||||||||||||++|+||||||||++|
T Consensus 149 ~m~~~~~~QsIiisGESGAGKTe~~K~i~~yla-~~~~~~~-~~~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~i 226 (1080)
T 2dfs_A 149 QMARDERNQSIIVSGESGAGKTVSAKYAMRYFA-TVSGSAS-EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEI 226 (1080)
T ss_dssp HHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHH-HTTTCCT-TTCTHHHHHHHHHHHHHHHEEEETTEEEEECSEEEEEE
T ss_pred HHHhcCCCcEEEEcCCCCCCccchHHHHHHHHH-hhccCCC-ccchHHHHHHHHHHHHHhcCCcCCCCCCccccceeEEE
Confidence 999999999999999999999999999999999 7776442 25789999999999999999999999999999999999
Q ss_pred EEcCCCCeeeeEecccC
Q psy18111 170 EFDYKGDPLGAHITNCK 186 (186)
Q Consensus 170 ~f~~~g~i~ga~i~~y~ 186 (186)
+|+.+|.|+||+|++||
T Consensus 227 ~F~~~g~i~Ga~i~~yL 243 (1080)
T 2dfs_A 227 GFDKRYRIIGANMRTYL 243 (1080)
T ss_dssp EECTTCCEEEEEEEEEC
T ss_pred EECCCCCEeeecceeEe
Confidence 99999999999999997
No 11
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=100.00 E-value=1.3e-59 Score=453.81 Aligned_cols=175 Identities=42% Similarity=0.686 Sum_probs=167.1
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHHhcCCccccccceEEEeCCCCCCCCCCHHHHHHHhcCCCCCCCchHHHhHHHHHHH
Q psy18111 11 TGAWDCVLLDPLSEDTFISNLHLRYKRDHIYTYIGNVLVTVNPYKPLNIYSAELARAYRTRGPFQLPPHIFAIAGSAYRW 90 (186)
Q Consensus 11 ~~~~Dl~~L~~l~e~~il~~L~~Ry~~~~iyT~~g~~Li~vNP~~~l~~y~~~~~~~y~~~~~~~~~PHi~~~a~~a~~~ 90 (186)
.+++||+.|+++||++||++|+.||..++||||+|++||+||||+.+|+|+++++..|+++.+.++|||||++|+.||++
T Consensus 83 ~~~~Dl~~l~~l~e~~vl~~L~~Ry~~~~iyT~~g~~li~vNP~~~l~~y~~~~~~~y~~~~~~~~~PHi~aia~~ay~~ 162 (1184)
T 1i84_S 83 SKVEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRS 162 (1184)
T ss_dssp TTCSBTTSSSCCCTTHHHHHHHHHHHHTCCEEEETTEEEEECCCSCCSCCSHHHHHHHSSCCSSSSCCCHHHHHHHHHHH
T ss_pred cccchhhhhccccHHHHHHHHHHHhcCCCcEEecCcceeeeCCCcCCCCCCHHHHHHhcCcccccCCccHhhhHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCeEEEecCCCCCchhHHHHHHHHHHhhhcCCCCCc-------------hhhHHHHHhhccchHHhhcCccccCC
Q psy18111 91 LRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPGTGPV-------------LNAVREKLKHIGPLLEAFGNAQTLKN 157 (186)
Q Consensus 91 ~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~~~~~-------------~~~~~~~i~~~~~iLeaFgnakT~~N 157 (186)
|+..++||||||+||||||||+++|+|++||+ .+++.... ...++++|+++||||||||||||++|
T Consensus 163 m~~~~~~Q~i~isGeSGaGKTe~~k~~~~yla-~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~npileaFGnAkT~rN 241 (1184)
T 1i84_S 163 MLQDREDQSILCTGESGAGKTENTKKVIQYLA-VVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKN 241 (1184)
T ss_dssp HHHHTCCEEEECCCSTTSSTTHHHHHHHHHHH-HHSSCCSCC------CTTCCCCCSHHHHHHHHHHHHTTTTEEEETTE
T ss_pred HHhcCCCcEEEEecCCCCCccHHHHHHHHHHH-HHhcCCCcccccccccccccccchHHHHHHHHHHHHHHhcCCcCCCC
Confidence 99999999999999999999999999999999 76654210 35789999999999999999999999
Q ss_pred CCCCCceeeEEEEEcCCCCeeeeEecccC
Q psy18111 158 DNSSRFGKYLDIEFDYKGDPLGAHITNCK 186 (186)
Q Consensus 158 ~nSSR~gk~~~l~f~~~g~i~ga~i~~y~ 186 (186)
+|||||||||+|+|+.+|.|+||+|.+||
T Consensus 242 ~NSSRfgk~~~i~f~~~g~i~ga~i~~yl 270 (1184)
T 1i84_S 242 DNSSRFGKFIRINFDVTGYIVGANIETYL 270 (1184)
T ss_dssp EEEECSCEEEEEEECSSSCEEEEEEEECC
T ss_pred ccccccceeEEEEECCCCCEeeeEEeEee
Confidence 99999999999999999999999999997
No 12
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=96.89 E-value=0.00066 Score=52.23 Aligned_cols=32 Identities=31% Similarity=0.283 Sum_probs=24.1
Q ss_pred HHHhhCCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 90 WLRDRSEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 90 ~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.|......+.|+|.|.+|||||+.++.+.+.+
T Consensus 22 ~~m~~~~g~~i~l~G~~GsGKSTl~~~L~~~~ 53 (200)
T 4eun_A 22 SMMTGEPTRHVVVMGVSGSGKTTIAHGVADET 53 (200)
T ss_dssp ------CCCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred hhhcCCCCcEEEEECCCCCCHHHHHHHHHHhh
Confidence 44555678899999999999999999998865
No 13
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=96.87 E-value=0.0011 Score=50.98 Aligned_cols=31 Identities=29% Similarity=0.287 Sum_probs=27.1
Q ss_pred HhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 92 RDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 92 ~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
......+.|+|.|.||||||+.++.+.+.+.
T Consensus 20 ~~~~~g~~i~l~G~sGsGKSTl~~~La~~l~ 50 (200)
T 3uie_A 20 LLDQKGCVIWVTGLSGSGKSTLACALNQMLY 50 (200)
T ss_dssp HHTSCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred hcCCCCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3456788999999999999999999999874
No 14
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=96.76 E-value=0.0012 Score=49.65 Aligned_cols=28 Identities=29% Similarity=0.355 Sum_probs=25.3
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.++|.|++|+|||+.++.+...+.
T Consensus 36 ~~g~~~~l~G~~G~GKTtL~~~i~~~~~ 63 (180)
T 3ec2_A 36 EEGKGLTFVGSPGVGKTHLAVATLKAIY 63 (180)
T ss_dssp GGCCEEEECCSSSSSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3468899999999999999999999886
No 15
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=96.70 E-value=0.00093 Score=50.63 Aligned_cols=27 Identities=11% Similarity=0.292 Sum_probs=23.7
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+.|+|+|.||||||+.++.+.+.+.
T Consensus 4 ~g~~i~i~GpsGsGKSTL~~~L~~~~~ 30 (180)
T 1kgd_A 4 MRKTLVLLGAHGVGRRHIKNTLITKHP 30 (180)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhCC
Confidence 456899999999999999999998753
No 16
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=96.68 E-value=0.0016 Score=50.46 Aligned_cols=28 Identities=25% Similarity=0.401 Sum_probs=25.9
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.|.|.|.||||||+.++.+...+.
T Consensus 20 ~~g~~v~I~G~sGsGKSTl~~~l~~~~~ 47 (208)
T 3c8u_A 20 PGRQLVALSGAPGSGKSTLSNPLAAALS 47 (208)
T ss_dssp CSCEEEEEECCTTSCTHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHh
Confidence 5778999999999999999999999886
No 17
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=96.65 E-value=0.00086 Score=50.68 Aligned_cols=30 Identities=27% Similarity=0.495 Sum_probs=24.3
Q ss_pred HHhhCCCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 91 LRDRSEDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 91 ~~~~~~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
|..-.+.+.|++.|.+|||||+.++.+...
T Consensus 3 m~~i~~g~~i~l~G~~GsGKSTl~~~La~~ 32 (191)
T 1zp6_A 3 MTDDLGGNILLLSGHPGSGKSTIAEALANL 32 (191)
T ss_dssp ---CCTTEEEEEEECTTSCHHHHHHHHHTC
T ss_pred ccCCCCCeEEEEECCCCCCHHHHHHHHHhc
Confidence 445567789999999999999999999875
No 18
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=96.63 E-value=0.0023 Score=47.26 Aligned_cols=31 Identities=26% Similarity=0.297 Sum_probs=26.8
Q ss_pred HhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 92 RDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 92 ~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.......++|.|++|+|||+.++.+.+.+.
T Consensus 38 l~~~~~~~~ll~G~~G~GKT~l~~~~~~~~~ 68 (195)
T 1jbk_A 38 LQRRTKNNPVLIGEPGVGKTAIVEGLAQRII 68 (195)
T ss_dssp HTSSSSCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HhcCCCCceEEECCCCCCHHHHHHHHHHHHH
Confidence 3445678899999999999999999999875
No 19
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=96.63 E-value=0.0012 Score=49.35 Aligned_cols=25 Identities=24% Similarity=0.409 Sum_probs=22.2
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
+..|+++|.||||||+.++.+.+.+
T Consensus 3 ~~~i~l~G~~GsGKST~a~~La~~l 27 (178)
T 1qhx_A 3 TRMIILNGGSSAGKSGIVRCLQSVL 27 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHS
T ss_pred ceEEEEECCCCCCHHHHHHHHHHhc
Confidence 4679999999999999999998854
No 20
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=96.60 E-value=0.0039 Score=46.01 Aligned_cols=31 Identities=26% Similarity=0.309 Sum_probs=26.9
Q ss_pred HhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 92 RDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 92 ~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.......++|.|++|+|||+.++.+.+.+.
T Consensus 38 l~~~~~~~vll~G~~G~GKT~la~~~~~~~~ 68 (187)
T 2p65_A 38 LSRRTKNNPILLGDPGVGKTAIVEGLAIKIV 68 (187)
T ss_dssp HTSSSSCEEEEESCGGGCHHHHHHHHHHHHH
T ss_pred HhCCCCCceEEECCCCCCHHHHHHHHHHHHH
Confidence 3446678899999999999999999999886
No 21
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=96.57 E-value=0.0011 Score=50.51 Aligned_cols=25 Identities=28% Similarity=0.404 Sum_probs=22.5
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.|+|+|.||||||+.++.++..+.
T Consensus 2 ~ii~l~GpsGaGKsTl~~~L~~~~~ 26 (186)
T 3a00_A 2 RPIVISGPSGTGKSTLLKKLFAEYP 26 (186)
T ss_dssp CCEEEESSSSSSHHHHHHHHHHHCG
T ss_pred CEEEEECCCCCCHHHHHHHHHhhCC
Confidence 5689999999999999999998765
No 22
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=96.53 E-value=0.0013 Score=50.81 Aligned_cols=27 Identities=22% Similarity=0.321 Sum_probs=22.8
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+.++|.|.||||||+..+.++..+.
T Consensus 3 ~g~~i~lvGpsGaGKSTLl~~L~~~~~ 29 (198)
T 1lvg_A 3 GPRPVVLSGPSGAGKSTLLKKLFQEHS 29 (198)
T ss_dssp --CCEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhCc
Confidence 346799999999999999999999763
No 23
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=96.52 E-value=0.0016 Score=49.70 Aligned_cols=26 Identities=31% Similarity=0.442 Sum_probs=23.6
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
+.+.|+|.|.+|||||+.++.+...+
T Consensus 6 ~g~ii~l~Gp~GsGKSTl~~~L~~~~ 31 (205)
T 3tr0_A 6 KANLFIISAPSGAGKTSLVRALVKAL 31 (205)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHS
T ss_pred CCcEEEEECcCCCCHHHHHHHHHhhC
Confidence 56789999999999999999999875
No 24
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=96.49 E-value=0.0016 Score=50.40 Aligned_cols=28 Identities=21% Similarity=0.328 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|+||||||+..+.+...+.
T Consensus 18 ~~Gei~~l~GpnGsGKSTLl~~l~gl~~ 45 (207)
T 1znw_A 18 AVGRVVVLSGPSAVGKSTVVRCLRERIP 45 (207)
T ss_dssp -CCCEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhhCC
Confidence 4678999999999999999999999763
No 25
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=96.48 E-value=0.0041 Score=47.98 Aligned_cols=35 Identities=17% Similarity=0.086 Sum_probs=28.8
Q ss_pred HHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 88 YRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 88 ~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+......+.++|.|++|+|||+.++.+.+.+.
T Consensus 43 l~~~~~~~~~~~~ll~G~~G~GKT~la~~l~~~~~ 77 (242)
T 3bos_A 43 LKSAASGDGVQAIYLWGPVKSGRTHLIHAACARAN 77 (242)
T ss_dssp HHHHHHTCSCSEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 34444445778999999999999999999998876
No 26
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=96.43 E-value=0.002 Score=47.81 Aligned_cols=27 Identities=26% Similarity=0.302 Sum_probs=23.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.-|.|+|+|..|||||+.++.+-+.|-
T Consensus 6 ~~~~i~l~G~~GsGKSTva~~La~~lg 32 (168)
T 1zuh_A 6 HMQHLVLIGFMGSGKSSLAQELGLALK 32 (168)
T ss_dssp --CEEEEESCTTSSHHHHHHHHHHHHT
T ss_pred ccceEEEECCCCCCHHHHHHHHHHHhC
Confidence 448999999999999999999988654
No 27
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=96.42 E-value=0.0015 Score=50.27 Aligned_cols=27 Identities=26% Similarity=0.292 Sum_probs=24.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.....|+|+|.||||||+.++.+.+.+
T Consensus 10 ~~~~~i~l~G~sGsGKsTl~~~L~~~~ 36 (204)
T 2qor_A 10 ARIPPLVVCGPSGVGKGTLIKKVLSEF 36 (204)
T ss_dssp CCCCCEEEECCTTSCHHHHHHHHHHHC
T ss_pred ccCCEEEEECCCCCCHHHHHHHHHHhC
Confidence 366789999999999999999999876
No 28
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=96.41 E-value=0.0016 Score=50.39 Aligned_cols=22 Identities=32% Similarity=0.478 Sum_probs=20.3
Q ss_pred EEecCCCCCchhHHHHHHHHHH
Q psy18111 100 IIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 100 IilsGeSGsGKt~~~k~il~~l 121 (186)
|||+|.||+|||+.++.+++-+
T Consensus 4 IVi~GPSG~GK~Tl~~~L~~~~ 25 (186)
T 1ex7_A 4 IVISGPSGTGKSTLLKKLFAEY 25 (186)
T ss_dssp EEEECCTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHhC
Confidence 8999999999999999998764
No 29
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=96.40 E-value=0.0017 Score=49.43 Aligned_cols=26 Identities=27% Similarity=0.299 Sum_probs=23.8
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
+...|+|.|.+|||||+.++.+...+
T Consensus 5 ~g~~i~l~G~~GsGKSTl~~~L~~~~ 30 (207)
T 2j41_A 5 KGLLIVLSGPSGVGKGTVRKRIFEDP 30 (207)
T ss_dssp CCCEEEEECSTTSCHHHHHHHHHHCT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhh
Confidence 46789999999999999999999987
No 30
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=96.40 E-value=0.0023 Score=49.05 Aligned_cols=27 Identities=22% Similarity=0.254 Sum_probs=23.9
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
....|+|.|.+|||||+.++.+.+.+-
T Consensus 24 ~~~~i~l~G~~GsGKsTl~~~La~~l~ 50 (199)
T 3vaa_A 24 AMVRIFLTGYMGAGKTTLGKAFARKLN 50 (199)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHcC
Confidence 557899999999999999999998654
No 31
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=96.38 E-value=0.0018 Score=50.20 Aligned_cols=28 Identities=29% Similarity=0.294 Sum_probs=24.8
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.....|+|+|.||||||+.++.+.+.+.
T Consensus 6 ~~g~~i~l~GpsGsGKsTl~~~L~~~~~ 33 (208)
T 3tau_A 6 ERGLLIVLSGPSGVGKGTVREAVFKDPE 33 (208)
T ss_dssp CCCCEEEEECCTTSCHHHHHHHHHHSTT
T ss_pred CCCcEEEEECcCCCCHHHHHHHHHhhCC
Confidence 4567899999999999999999998764
No 32
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=96.36 E-value=0.0031 Score=51.11 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=28.6
Q ss_pred HHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 88 YRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 88 ~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..+. -...+.+++.|.+|||||+..+.++.++.
T Consensus 17 l~~i~-i~~g~~v~i~Gp~GsGKSTll~~l~g~~~ 50 (261)
T 2eyu_A 17 VLELC-HRKMGLILVTGPTGSGKSTTIASMIDYIN 50 (261)
T ss_dssp HHHGG-GCSSEEEEEECSTTCSHHHHHHHHHHHHH
T ss_pred HHHHh-hCCCCEEEEECCCCccHHHHHHHHHHhCC
Confidence 34443 56778999999999999999999999886
No 33
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=96.31 E-value=0.0031 Score=47.00 Aligned_cols=26 Identities=35% Similarity=0.475 Sum_probs=23.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
+...|+|.|.+|||||+.++.+.+.+
T Consensus 7 ~g~~i~l~G~~GsGKSTl~~~l~~~~ 32 (175)
T 1knq_A 7 DHHIYVLMGVSGSGKSAVASEVAHQL 32 (175)
T ss_dssp TSEEEEEECSTTSCHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHhh
Confidence 45789999999999999999998765
No 34
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=96.29 E-value=0.0026 Score=48.86 Aligned_cols=28 Identities=25% Similarity=0.313 Sum_probs=24.1
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+...|.|.|.+|||||+.++.+...+.
T Consensus 4 ~~~~~i~i~G~~GsGKSTl~~~l~~~~~ 31 (211)
T 3asz_A 4 PKPFVIGIAGGTASGKTTLAQALARTLG 31 (211)
T ss_dssp -CCEEEEEEESTTSSHHHHHHHHHHHHG
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3567899999999999999999999754
No 35
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=96.26 E-value=0.0021 Score=50.34 Aligned_cols=27 Identities=19% Similarity=0.260 Sum_probs=23.8
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
...+.+.|.|+||||||+..+.+...+
T Consensus 21 ~~G~~~~lvGpsGsGKSTLl~~L~g~~ 47 (218)
T 1z6g_A 21 NNIYPLVICGPSGVGKGTLIKKLLNEF 47 (218)
T ss_dssp -CCCCEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhhC
Confidence 467789999999999999999999865
No 36
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=96.24 E-value=0.0027 Score=46.73 Aligned_cols=24 Identities=21% Similarity=0.170 Sum_probs=21.6
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|+++|.+|||||+.++.+.+.+.
T Consensus 3 ~i~l~G~~GsGKsT~~~~L~~~l~ 26 (173)
T 3kb2_A 3 LIILEGPDCCFKSTVAAKLSKELK 26 (173)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 589999999999999999988754
No 37
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=96.24 E-value=0.0026 Score=50.26 Aligned_cols=28 Identities=25% Similarity=0.322 Sum_probs=24.4
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.++|+|+||||||+..+.++..+.
T Consensus 14 ~~G~ii~l~GpsGsGKSTLlk~L~g~~~ 41 (219)
T 1s96_A 14 AQGTLYIVSAPSGAGKSSLIQALLKTQP 41 (219)
T ss_dssp -CCCEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred CCCcEEEEECCCCCCHHHHHHHHhccCC
Confidence 4678999999999999999999998764
No 38
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=96.23 E-value=0.0049 Score=47.63 Aligned_cols=32 Identities=22% Similarity=0.161 Sum_probs=27.3
Q ss_pred HHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 91 LRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 91 ~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.........|++.|.+|||||+.++.+.+.+.
T Consensus 19 ~~~~~~~~~i~~~G~~GsGKsT~~~~l~~~l~ 50 (211)
T 1m7g_A 19 ELRNQRGLTIWLTGLSASGKSTLAVELEHQLV 50 (211)
T ss_dssp HHHTSSCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCCCCHHHHHHHHHHHhc
Confidence 34456778999999999999999999998775
No 39
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=96.23 E-value=0.0031 Score=47.21 Aligned_cols=26 Identities=19% Similarity=0.487 Sum_probs=23.0
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..|+|.|.+|||||+.++.+.+.+.
T Consensus 3 ~~~I~i~G~~GsGKsT~~~~L~~~l~ 28 (192)
T 1kht_A 3 NKVVVVTGVPGVGSTTSSQLAMDNLR 28 (192)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 45799999999999999999988765
No 40
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=96.22 E-value=0.0027 Score=48.63 Aligned_cols=26 Identities=31% Similarity=0.417 Sum_probs=22.8
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...|+|+|.+|||||+.++.+.+.+-
T Consensus 18 ~~~I~l~G~~GsGKSTla~~L~~~lg 43 (202)
T 3t61_A 18 PGSIVVMGVSGSGKSSVGEAIAEACG 43 (202)
T ss_dssp SSCEEEECSTTSCHHHHHHHHHHHHT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 44799999999999999999988764
No 41
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=96.21 E-value=0.0033 Score=47.27 Aligned_cols=27 Identities=26% Similarity=0.353 Sum_probs=23.5
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+..|++.|.+|||||+.++.+.+.+-
T Consensus 4 ~~~~I~l~G~~GsGKST~~~~L~~~l~ 30 (193)
T 2rhm_A 4 TPALIIVTGHPATGKTTLSQALATGLR 30 (193)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHcC
Confidence 456799999999999999999988754
No 42
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=96.19 E-value=0.0051 Score=46.88 Aligned_cols=25 Identities=24% Similarity=0.328 Sum_probs=23.6
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.|+|.|++|+|||+.++.+.+.+.
T Consensus 55 ~~~~l~G~~GtGKT~la~~i~~~~~ 79 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYLLAAIANELA 79 (202)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHH
Confidence 8899999999999999999999876
No 43
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=96.16 E-value=0.0034 Score=47.07 Aligned_cols=27 Identities=22% Similarity=0.235 Sum_probs=23.4
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+.|+++|.+|||||+.++.+.+.+-
T Consensus 10 ~~~~i~i~G~~GsGKst~~~~l~~~~~ 36 (180)
T 3iij_A 10 LLPNILLTGTPGVGKTTLGKELASKSG 36 (180)
T ss_dssp CCCCEEEECSTTSSHHHHHHHHHHHHC
T ss_pred cCCeEEEEeCCCCCHHHHHHHHHHHhC
Confidence 456799999999999999999987654
No 44
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=96.16 E-value=0.004 Score=46.71 Aligned_cols=27 Identities=22% Similarity=0.403 Sum_probs=24.4
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+...|++.|.+|||||+.++.+.+++.
T Consensus 4 ~g~~i~l~G~~GsGKST~~~~L~~~l~ 30 (179)
T 2pez_A 4 RGCTVWLTGLSGAGKTTVSMALEEYLV 30 (179)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHh
Confidence 567899999999999999999999874
No 45
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=96.14 E-value=0.0038 Score=46.84 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=25.7
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.+.|.|++|||||+..|.+...+.
T Consensus 31 ~~Ge~v~L~G~nGaGKTTLlr~l~g~l~ 58 (158)
T 1htw_A 31 EKAIMVYLNGDLGAGKTTLTRGMLQGIG 58 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhCC
Confidence 6788999999999999999999999874
No 46
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=96.12 E-value=0.0037 Score=46.27 Aligned_cols=27 Identities=33% Similarity=0.341 Sum_probs=25.2
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+.++|.|++|+|||+.++.+...+.
T Consensus 35 ~g~~~~l~G~~G~GKTtL~~~i~~~~~ 61 (149)
T 2kjq_A 35 HGQFIYVWGEEGAGKSHLLQAWVAQAL 61 (149)
T ss_dssp CCSEEEEESSSTTTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 678999999999999999999999886
No 47
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=96.11 E-value=0.0031 Score=46.73 Aligned_cols=26 Identities=19% Similarity=0.364 Sum_probs=22.5
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...|+|.|.+|||||+.++.+...+.
T Consensus 4 ~~~i~l~G~~GsGKSTl~~~La~~l~ 29 (173)
T 1kag_A 4 KRNIFLVGPMGAGKSTIGRQLAQQLN 29 (173)
T ss_dssp CCCEEEECCTTSCHHHHHHHHHHHTT
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhC
Confidence 45799999999999999999988654
No 48
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=96.11 E-value=0.0032 Score=49.17 Aligned_cols=27 Identities=15% Similarity=0.345 Sum_probs=24.2
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+.|+|+|.||+|||+.++.+++.+.
T Consensus 18 ~g~~ivl~GPSGaGKsTL~~~L~~~~~ 44 (197)
T 3ney_A 18 GRKTLVLIGASGVGRSHIKNALLSQNP 44 (197)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred CCCEEEEECcCCCCHHHHHHHHHhhCC
Confidence 567899999999999999999998754
No 49
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=96.04 E-value=0.0041 Score=47.41 Aligned_cols=24 Identities=38% Similarity=0.553 Sum_probs=21.8
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.|.|++|||||+..+.+...+.
T Consensus 2 ~i~l~G~nGsGKTTLl~~l~g~l~ 25 (178)
T 1ye8_A 2 KIIITGEPGVGKTTLVKKIVERLG 25 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHG
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 578999999999999999999874
No 50
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=96.04 E-value=0.0068 Score=45.49 Aligned_cols=21 Identities=38% Similarity=0.544 Sum_probs=19.1
Q ss_pred CCCeEEEecCCCCCchhHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAAS 115 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k 115 (186)
.+.+.+.+.|++|||||+.++
T Consensus 7 ~~gei~~l~G~nGsGKSTl~~ 27 (171)
T 4gp7_A 7 PELSLVVLIGSSGSGKSTFAK 27 (171)
T ss_dssp ESSEEEEEECCTTSCHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHH
Confidence 356789999999999999999
No 51
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=96.03 E-value=0.0041 Score=46.93 Aligned_cols=27 Identities=26% Similarity=0.426 Sum_probs=24.4
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+...|++.|.+|||||+.++.+.+.+.
T Consensus 12 ~~~~i~l~G~~GsGKsT~~~~L~~~l~ 38 (186)
T 2yvu_A 12 KGIVVWLTGLPGSGKTTIATRLADLLQ 38 (186)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 556899999999999999999998876
No 52
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=96.03 E-value=0.0045 Score=46.42 Aligned_cols=26 Identities=27% Similarity=0.293 Sum_probs=22.9
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...|+++|.+|||||+.++.+.+.+-
T Consensus 5 ~~~i~l~G~~GsGKst~a~~La~~l~ 30 (185)
T 3trf_A 5 LTNIYLIGLMGAGKTSVGSQLAKLTK 30 (185)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 45799999999999999999988654
No 53
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=96.03 E-value=0.0042 Score=49.19 Aligned_cols=27 Identities=19% Similarity=0.245 Sum_probs=24.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+..|+|.|.+|||||+.++.+.+.+.
T Consensus 26 ~~~~i~l~G~~GsGKSTl~k~La~~lg 52 (246)
T 2bbw_A 26 KLLRAVILGPPGSGKGTVCQRIAQNFG 52 (246)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHhC
Confidence 468999999999999999999997664
No 54
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=96.00 E-value=0.0021 Score=48.96 Aligned_cols=25 Identities=24% Similarity=0.332 Sum_probs=23.4
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.|.|.|+||||||+.++.+++++.
T Consensus 3 ~~v~IvG~SGsGKSTL~~~L~~~~~ 27 (171)
T 2f1r_A 3 LILSIVGTSDSGKTTLITRMMPILR 27 (171)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhh
Confidence 5788999999999999999999987
No 55
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=95.97 E-value=0.0094 Score=44.93 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=26.5
Q ss_pred HHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 89 RWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 89 ~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.......++|.|++|+|||+.++.+.+.+.
T Consensus 30 ~~~l~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~ 63 (226)
T 2chg_A 30 KGYVERKNIPHLLFSGPPGTGKTATAIALARDLF 63 (226)
T ss_dssp HHHHHTTCCCCEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 3344444555699999999999999999998764
No 56
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=95.97 E-value=0.0057 Score=54.91 Aligned_cols=29 Identities=21% Similarity=0.329 Sum_probs=26.0
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
-.+.+.|+|.|.||||||+.++.+.+.+.
T Consensus 366 ~~~G~iI~LiG~sGSGKSTLar~La~~L~ 394 (552)
T 3cr8_A 366 ERQGFTVFFTGLSGAGKSTLARALAARLM 394 (552)
T ss_dssp GGSCEEEEEEESSCHHHHHHHHHHHHHHH
T ss_pred cccceEEEEECCCCChHHHHHHHHHHhhc
Confidence 34678999999999999999999999886
No 57
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=95.94 E-value=0.0052 Score=50.60 Aligned_cols=29 Identities=24% Similarity=0.311 Sum_probs=26.0
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..++..|.|.|.||||||+.++.+.+.+.
T Consensus 28 ~~~~~ii~I~G~sGsGKSTla~~L~~~l~ 56 (290)
T 1odf_A 28 NKCPLFIFFSGPQGSGKSFTSIQIYNHLM 56 (290)
T ss_dssp CCSCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHhh
Confidence 35677899999999999999999999887
No 58
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=95.93 E-value=0.013 Score=44.62 Aligned_cols=29 Identities=24% Similarity=0.327 Sum_probs=24.9
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+..++|.|++|+|||+.++.+.+.+.
T Consensus 42 ~~~~~~~ll~G~~G~GKT~l~~~~~~~~~ 70 (250)
T 1njg_A 42 GRIHHAYLFSGTRGVGKTSIARLLAKGLN 70 (250)
T ss_dssp TCCCSEEEEECSTTSCHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHhc
Confidence 34456899999999999999999998775
No 59
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=95.93 E-value=0.0055 Score=50.97 Aligned_cols=29 Identities=28% Similarity=0.336 Sum_probs=26.3
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+.+.|.|.|.||||||+.++.|...+.
T Consensus 87 ~~~g~ivgI~G~sGsGKSTL~~~L~gll~ 115 (312)
T 3aez_A 87 RPVPFIIGVAGSVAVGKSTTARVLQALLA 115 (312)
T ss_dssp SCCCEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCchHHHHHHHHHhhcc
Confidence 46778999999999999999999999887
No 60
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=95.92 E-value=0.011 Score=48.46 Aligned_cols=26 Identities=27% Similarity=0.408 Sum_probs=23.1
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.+..|+++|.||||||+.++.+.+.+
T Consensus 32 ~~~livl~G~sGsGKSTla~~L~~~~ 57 (287)
T 1gvn_B 32 SPTAFLLGGQPGSGKTSLRSAIFEET 57 (287)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 45689999999999999999998865
No 61
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=95.92 E-value=0.0051 Score=47.29 Aligned_cols=28 Identities=25% Similarity=0.240 Sum_probs=25.1
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+...|.++|.+|||||+.++.+...+.
T Consensus 20 ~~~~~i~i~G~~GsGKstl~~~l~~~~~ 47 (201)
T 1rz3_A 20 AGRLVLGIDGLSRSGKTTLANQLSQTLR 47 (201)
T ss_dssp SSSEEEEEEECTTSSHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHh
Confidence 4567899999999999999999999875
No 62
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=95.92 E-value=0.0051 Score=45.60 Aligned_cols=23 Identities=30% Similarity=0.401 Sum_probs=20.9
Q ss_pred CeEEEecCCCCCchhHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
+..|++.|.+|||||+.++.+.+
T Consensus 2 ~~~I~i~G~~GsGKST~a~~L~~ 24 (181)
T 1ly1_A 2 KKIILTIGCPGSGKSTWAREFIA 24 (181)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHH
T ss_pred CeEEEEecCCCCCHHHHHHHHHh
Confidence 35799999999999999999988
No 63
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=95.90 E-value=0.0041 Score=46.58 Aligned_cols=24 Identities=29% Similarity=0.357 Sum_probs=22.2
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|++.|.+|||||+.++.+.+.+.
T Consensus 3 ~I~i~G~~GsGKsT~~~~L~~~l~ 26 (194)
T 1nks_A 3 IGIVTGIPGVGKSTVLAKVKEILD 26 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 589999999999999999999775
No 64
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=95.89 E-value=0.0089 Score=49.29 Aligned_cols=28 Identities=18% Similarity=0.299 Sum_probs=25.0
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+...|.|.|.+|||||+.++.+...+.
T Consensus 78 ~~g~iigI~G~~GsGKSTl~~~L~~~l~ 105 (308)
T 1sq5_A 78 RIPYIISIAGSVAVGKSTTARVLQALLS 105 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHh
Confidence 5678999999999999999999998764
No 65
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=95.88 E-value=0.005 Score=46.48 Aligned_cols=23 Identities=22% Similarity=0.416 Sum_probs=20.7
Q ss_pred eEEEecCCCCCchhHHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
+.|++.|.+|||||+.++.+.+.
T Consensus 3 ~ii~l~G~~GaGKSTl~~~L~~~ 25 (189)
T 2bdt_A 3 KLYIITGPAGVGKSTTCKRLAAQ 25 (189)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred eEEEEECCCCCcHHHHHHHHhcc
Confidence 57899999999999999999873
No 66
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=95.86 E-value=0.0054 Score=45.98 Aligned_cols=27 Identities=30% Similarity=0.393 Sum_probs=23.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+...|++.|.+|||||+.++.+.+.+-
T Consensus 3 ~g~~I~l~G~~GsGKST~~~~La~~l~ 29 (186)
T 3cm0_A 3 VGQAVIFLGPPGAGKGTQASRLAQELG 29 (186)
T ss_dssp CEEEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 346799999999999999999987553
No 67
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=95.85 E-value=0.0057 Score=47.32 Aligned_cols=25 Identities=24% Similarity=0.393 Sum_probs=22.5
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
...|.|.|.+|||||+.++.+.+.+
T Consensus 5 ~~~i~i~G~~GsGKSTl~~~L~~~~ 29 (227)
T 1cke_A 5 APVITIDGPSGAGKGTLCKAMAEAL 29 (227)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 4579999999999999999999865
No 68
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=95.82 E-value=0.018 Score=45.76 Aligned_cols=28 Identities=25% Similarity=0.196 Sum_probs=24.3
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
...+-.|+|+|.+|||||+.++.+.+.+
T Consensus 26 ~~~~~~I~l~G~~GsGKsT~a~~L~~~~ 53 (243)
T 3tlx_A 26 SKPDGRYIFLGAPGSGKGTQSLNLKKSH 53 (243)
T ss_dssp TSCCEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred cCCCcEEEEECCCCCCHHHHHHHHHHHh
Confidence 3466789999999999999999998765
No 69
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=95.81 E-value=0.0045 Score=45.26 Aligned_cols=22 Identities=32% Similarity=0.525 Sum_probs=19.5
Q ss_pred EEEecCCCCCchhHHHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l 121 (186)
.|+++|.+|||||+.++.+ +.+
T Consensus 3 ~I~l~G~~GsGKsT~a~~L-~~~ 24 (179)
T 3lw7_A 3 VILITGMPGSGKSEFAKLL-KER 24 (179)
T ss_dssp EEEEECCTTSCHHHHHHHH-HHT
T ss_pred EEEEECCCCCCHHHHHHHH-HHC
Confidence 5899999999999999999 543
No 70
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=95.80 E-value=0.01 Score=51.40 Aligned_cols=36 Identities=25% Similarity=0.389 Sum_probs=30.0
Q ss_pred HHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 86 SAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 86 ~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+++.++ ......|+++|++|||||++.+.++.++.
T Consensus 157 ~~L~~l~-~~~ggii~I~GpnGSGKTTlL~allg~l~ 192 (418)
T 1p9r_A 157 DNFRRLI-KRPHGIILVTGPTGSGKSTTLYAGLQELN 192 (418)
T ss_dssp HHHHHHH-TSSSEEEEEECSTTSCHHHHHHHHHHHHC
T ss_pred HHHHHHH-HhcCCeEEEECCCCCCHHHHHHHHHhhcC
Confidence 3566664 46677899999999999999999999886
No 71
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=95.80 E-value=0.0061 Score=46.08 Aligned_cols=24 Identities=21% Similarity=0.343 Sum_probs=22.0
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|+|.|.+|||||+.++.+.+.|.
T Consensus 2 ~I~i~G~~GsGKsT~~~~L~~~l~ 25 (205)
T 2jaq_A 2 KIAIFGTVGAGKSTISAEISKKLG 25 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHC
T ss_pred EEEEECCCccCHHHHHHHHHHhcC
Confidence 589999999999999999999765
No 72
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=95.74 E-value=0.0044 Score=48.55 Aligned_cols=27 Identities=30% Similarity=0.342 Sum_probs=18.0
Q ss_pred CCCeEEEecCCCCCchhHHHHHHH-HHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVV-YFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il-~~l 121 (186)
...+.|+|.|.+|||||+.++.+. ..+
T Consensus 25 ~~G~ii~l~Gp~GsGKSTl~~~L~~~~~ 52 (231)
T 3lnc_A 25 SVGVILVLSSPSGCGKTTVANKLLEKQK 52 (231)
T ss_dssp ECCCEEEEECSCC----CHHHHHHC---
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhcCC
Confidence 356789999999999999999999 876
No 73
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=95.73 E-value=0.0063 Score=44.96 Aligned_cols=24 Identities=21% Similarity=0.318 Sum_probs=21.5
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|+|+|.+|||||+.++.+-+.+-
T Consensus 4 ~I~l~G~~GsGKsT~a~~La~~lg 27 (173)
T 1e6c_A 4 PIFMVGARGCGMTTVGRELARALG 27 (173)
T ss_dssp CEEEESCTTSSHHHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHhC
Confidence 589999999999999999988654
No 74
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=95.73 E-value=0.005 Score=48.08 Aligned_cols=27 Identities=22% Similarity=0.322 Sum_probs=22.3
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.+...|+|.|.+|||||+.++.+.+.+
T Consensus 5 ~~~~~I~l~G~~GsGKsT~a~~La~~l 31 (227)
T 1zd8_A 5 ARLLRAVIMGAPGSGKGTVSSRITTHF 31 (227)
T ss_dssp --CCEEEEEECTTSSHHHHHHHHHHHS
T ss_pred ccCcEEEEECCCCCCHHHHHHHHHHHc
Confidence 345689999999999999999998754
No 75
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=95.72 E-value=0.0073 Score=50.27 Aligned_cols=36 Identities=17% Similarity=0.415 Sum_probs=29.7
Q ss_pred HHHHHHH-hhCCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 86 SAYRWLR-DRSEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 86 ~a~~~~~-~~~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.++..+. .-...+++.|.|+||||||+.++.|+.++
T Consensus 114 ~vL~~vsl~i~~Ge~vaIvGpsGsGKSTLl~lL~gl~ 150 (305)
T 2v9p_A 114 NALKLWLKGIPKKNCLAFIGPPNTGKSMLCNSLIHFL 150 (305)
T ss_dssp HHHHHHHHTCTTCSEEEEECSSSSSHHHHHHHHHHHH
T ss_pred hhhccceEEecCCCEEEEECCCCCcHHHHHHHHhhhc
Confidence 4555553 33688999999999999999999999986
No 76
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=95.72 E-value=0.0028 Score=48.56 Aligned_cols=24 Identities=21% Similarity=0.281 Sum_probs=22.3
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|+|.|.+|||||+.++.+.+++.
T Consensus 2 ~I~i~G~~GsGKsTl~~~L~~~l~ 25 (214)
T 1gtv_A 2 LIAIEGVDGAGKRTLVEKLSGAFR 25 (214)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHH
Confidence 589999999999999999999885
No 77
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=95.71 E-value=0.0063 Score=45.40 Aligned_cols=24 Identities=29% Similarity=0.322 Sum_probs=21.3
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|+|.|.+|||||+.++.+.+.+-
T Consensus 6 ~i~i~G~~GsGKsTla~~La~~l~ 29 (175)
T 1via_A 6 NIVFIGFMGSGKSTLARALAKDLD 29 (175)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCCHHHHHHHHHHHcC
Confidence 599999999999999999988653
No 78
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=95.67 E-value=0.0084 Score=47.51 Aligned_cols=28 Identities=25% Similarity=0.326 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+...|.|.|.+|||||+.++.+...+-
T Consensus 23 ~~g~iigI~G~~GsGKSTl~k~L~~~lG 50 (245)
T 2jeo_A 23 MRPFLIGVSGGTASGKSTVCEKIMELLG 50 (245)
T ss_dssp CCSEEEEEECSTTSSHHHHHHHHHHHHT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHhc
Confidence 4667899999999999999999988754
No 79
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=95.66 E-value=0.0073 Score=45.45 Aligned_cols=27 Identities=30% Similarity=0.400 Sum_probs=23.4
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+...|+|.|.+|||||+.++.+.+.+-
T Consensus 8 ~~~~I~l~G~~GsGKsT~~~~La~~l~ 34 (196)
T 2c95_A 8 KTNIIFVVGGPGSGKGTQCEKIVQKYG 34 (196)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 456899999999999999999988653
No 80
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=95.65 E-value=0.0084 Score=44.86 Aligned_cols=25 Identities=24% Similarity=0.337 Sum_probs=22.0
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
+..|++.|.+|||||+.++.+.+.+
T Consensus 3 ~~~I~l~G~~GsGKsT~a~~L~~~~ 27 (196)
T 1tev_A 3 PLVVFVLGGPGAGKGTQCARIVEKY 27 (196)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHh
Confidence 4579999999999999999988764
No 81
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=95.65 E-value=0.0078 Score=44.30 Aligned_cols=24 Identities=25% Similarity=0.254 Sum_probs=21.4
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|+|.|.+|||||+.++.+.+.+-
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~l~ 25 (168)
T 2pt5_A 2 RIYLIGFMCSGKSTVGSLLSRSLN 25 (168)
T ss_dssp EEEEESCTTSCHHHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHhC
Confidence 589999999999999999988654
No 82
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=95.64 E-value=0.007 Score=45.38 Aligned_cols=24 Identities=21% Similarity=0.324 Sum_probs=21.3
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|+|+|.+|||||+.++.+.+.+-
T Consensus 4 ~I~l~G~~GsGKsT~a~~La~~lg 27 (184)
T 2iyv_A 4 KAVLVGLPGSGKSTIGRRLAKALG 27 (184)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHcC
Confidence 589999999999999999988654
No 83
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=95.63 E-value=0.014 Score=52.18 Aligned_cols=48 Identities=17% Similarity=0.288 Sum_probs=33.7
Q ss_pred CCCCchHHH---hHHHHHHHHH--hhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 74 FQLPPHIFA---IAGSAYRWLR--DRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 74 ~~~~PHi~~---~a~~a~~~~~--~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+|+-|. ++. ..+... ..+....|+++|.+|||||+.++.+.+.|.
T Consensus 345 g~~~p~~~~r~eV~~-~lr~~~~~~~~~~~~I~l~G~~GsGKSTia~~La~~L~ 397 (546)
T 2gks_A 345 GRKLPEWFTRPEVAE-ILAETYVPKHKQGFCVWLTGLPCAGKSTIAEILATMLQ 397 (546)
T ss_dssp TCCCCTTTSCHHHHH-HHHHHSCCGGGCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCCCCccccchhHHH-HHHHhhccccccceEEEccCCCCCCHHHHHHHHHHHhh
Confidence 345667665 443 223322 334567899999999999999999998775
No 84
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=95.62 E-value=0.014 Score=47.87 Aligned_cols=35 Identities=17% Similarity=0.077 Sum_probs=27.7
Q ss_pred HHHHHhhC--CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 88 YRWLRDRS--EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 88 ~~~~~~~~--~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.... ....++|.|++|+|||+.++.+.+.+.
T Consensus 26 ~~~~~~~~~~~~~~lll~G~~GtGKT~la~~i~~~~~ 62 (324)
T 1l8q_A 26 VKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAK 62 (324)
T ss_dssp HHHHHHTTTTSCSSEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhCcCCCCCeEEEECCCCCcHHHHHHHHHHHHH
Confidence 34444432 457899999999999999999999886
No 85
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=95.61 E-value=0.0093 Score=45.32 Aligned_cols=26 Identities=31% Similarity=0.471 Sum_probs=23.5
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..|++.|.+|||||+.++.+.+.+.
T Consensus 4 ~~~I~i~G~~GsGKsT~~~~L~~~l~ 29 (213)
T 2plr_A 4 GVLIAFEGIDGSGKSSQATLLKDWIE 29 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHHHh
Confidence 46799999999999999999999775
No 86
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=95.59 E-value=0.012 Score=49.80 Aligned_cols=34 Identities=18% Similarity=0.488 Sum_probs=27.7
Q ss_pred HHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 88 YRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 88 ~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..+. ......|+++|.+|||||++.+.++.++.
T Consensus 115 l~~l~-~~~~g~i~I~GptGSGKTTlL~~l~g~~~ 148 (356)
T 3jvv_A 115 FKRVS-DVPRGLVLVTGPTGSGKSTTLAAMLDYLN 148 (356)
T ss_dssp HHHHH-HCSSEEEEEECSTTSCHHHHHHHHHHHHH
T ss_pred HHHHH-hCCCCEEEEECCCCCCHHHHHHHHHhccc
Confidence 44443 34555899999999999999999999887
No 87
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=95.59 E-value=0.012 Score=48.75 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=26.7
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHhhhcCC
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIACATPG 127 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~ 127 (186)
+.+.|.+.|++|||||++++.+..++. ...+
T Consensus 99 ~g~vi~lvG~nGsGKTTll~~Lag~l~-~~~g 129 (302)
T 3b9q_A 99 KPAVIMIVGVNGGGKTTSLGKLAHRLK-NEGT 129 (302)
T ss_dssp SCEEEEEECCTTSCHHHHHHHHHHHHH-HTTC
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHH-HcCC
Confidence 567899999999999999999999987 4433
No 88
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=95.57 E-value=0.0057 Score=45.62 Aligned_cols=26 Identities=27% Similarity=0.348 Sum_probs=18.7
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...|++.|.+|||||+.++.+.+.+.
T Consensus 5 ~~~I~l~G~~GsGKST~a~~La~~l~ 30 (183)
T 2vli_A 5 SPIIWINGPFGVGKTHTAHTLHERLP 30 (183)
T ss_dssp CCEEEEECCC----CHHHHHHHHHST
T ss_pred CeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 45799999999999999999987654
No 89
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=95.57 E-value=0.011 Score=49.48 Aligned_cols=32 Identities=22% Similarity=0.292 Sum_probs=27.7
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHhhhcCC
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIACATPG 127 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~ 127 (186)
.+++.|.+.|++|||||++++.+..++. ...+
T Consensus 127 ~~g~vi~lvG~nGaGKTTll~~Lag~l~-~~~g 158 (328)
T 3e70_C 127 EKPYVIMFVGFNGSGKTTTIAKLANWLK-NHGF 158 (328)
T ss_dssp CSSEEEEEECCTTSSHHHHHHHHHHHHH-HTTC
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHH-hcCC
Confidence 5678999999999999999999999887 4433
No 90
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=95.55 E-value=0.011 Score=48.94 Aligned_cols=27 Identities=22% Similarity=0.433 Sum_probs=25.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.|.+.|.+|||||++++.+..++.
T Consensus 101 ~g~vi~lvG~nGsGKTTll~~Lagll~ 127 (304)
T 1rj9_A 101 KGRVVLVVGVNGVGKTTTIAKLGRYYQ 127 (304)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHHH
Confidence 567999999999999999999999887
No 91
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=95.54 E-value=0.0075 Score=47.98 Aligned_cols=28 Identities=25% Similarity=0.414 Sum_probs=24.5
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|+||||||+..|.+...+.
T Consensus 29 ~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~ 56 (235)
T 3tif_A 29 KEGEFVSIMGPSGSGKSTMLNIIGCLDK 56 (235)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCcHHHHHHHHhcCCC
Confidence 3678899999999999999999888665
No 92
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=95.53 E-value=0.0094 Score=50.69 Aligned_cols=29 Identities=28% Similarity=0.526 Sum_probs=26.3
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
-...+.|++.|.+|||||++.+.++.++.
T Consensus 133 ~~~g~~i~ivG~~GsGKTTll~~l~~~~~ 161 (372)
T 2ewv_A 133 HRKMGLILVTGPTGSGKSTTIASMIDYIN 161 (372)
T ss_dssp TSSSEEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred hcCCCEEEEECCCCCCHHHHHHHHHhhcC
Confidence 45678899999999999999999999887
No 93
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=95.53 E-value=0.0072 Score=48.24 Aligned_cols=28 Identities=25% Similarity=0.376 Sum_probs=24.0
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+..|++.|.+|||||+.++.+.+.+.
T Consensus 30 ~~~~~i~l~G~~GsGKSTla~~L~~~l~ 57 (253)
T 2p5t_B 30 KQPIAILLGGQSGAGKTTIHRIKQKEFQ 57 (253)
T ss_dssp SSCEEEEEESCGGGTTHHHHHHHHHHTT
T ss_pred cCCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 3456899999999999999999988763
No 94
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=95.51 E-value=0.0082 Score=45.19 Aligned_cols=24 Identities=25% Similarity=0.522 Sum_probs=21.9
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|++.|-+|||||+.++.+.+.|.
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l~ 25 (197)
T 2z0h_A 2 FITFEGIDGSGKSTQIQLLAQYLE 25 (197)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 489999999999999999999873
No 95
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=95.51 E-value=0.01 Score=45.22 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=24.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+..|+|.|.+|||||+.++.+.+.+-
T Consensus 18 ~~~~~I~l~G~~GsGKST~a~~La~~l~ 45 (201)
T 2cdn_A 18 GSHMRVLLLGPPGAGKGTQAVKLAEKLG 45 (201)
T ss_dssp CSCCEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4556899999999999999999988764
No 96
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=95.51 E-value=0.0096 Score=45.38 Aligned_cols=26 Identities=19% Similarity=0.202 Sum_probs=23.6
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
-..|+++|.||||||+.++.+++.+.
T Consensus 6 ~~~i~i~G~sGsGKTTl~~~l~~~l~ 31 (174)
T 1np6_A 6 IPLLAFAAWSGTGKTTLLKKLIPALC 31 (174)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCHHHHHHHHHHhcc
Confidence 35789999999999999999999876
No 97
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=95.49 E-value=0.0089 Score=47.78 Aligned_cols=27 Identities=26% Similarity=0.345 Sum_probs=23.1
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.....|.|.|.+|||||+.++.+.+.|
T Consensus 25 ~~g~~I~I~G~~GsGKSTl~k~La~~L 51 (252)
T 4e22_A 25 AIAPVITVDGPSGAGKGTLCKALAESL 51 (252)
T ss_dssp TTSCEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHhc
Confidence 345689999999999999999999654
No 98
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=95.48 E-value=0.01 Score=44.35 Aligned_cols=25 Identities=28% Similarity=0.395 Sum_probs=22.2
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
...|+|+|.+|||||+.++.+.+.+
T Consensus 6 ~~~I~l~G~~GsGKsT~~~~L~~~l 30 (194)
T 1qf9_A 6 PNVVFVLGGPGSGKGTQCANIVRDF 30 (194)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHh
Confidence 4579999999999999999998765
No 99
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=95.48 E-value=0.0091 Score=45.56 Aligned_cols=27 Identities=22% Similarity=0.495 Sum_probs=23.9
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
++..|+|+|-+|||||+.++.+.+.+.
T Consensus 9 ~~~~I~l~G~~GsGKST~~~~L~~~l~ 35 (212)
T 2wwf_A 9 KGKFIVFEGLDRSGKSTQSKLLVEYLK 35 (212)
T ss_dssp CSCEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred cCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 456799999999999999999998765
No 100
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=95.47 E-value=0.0088 Score=44.81 Aligned_cols=23 Identities=35% Similarity=0.498 Sum_probs=21.4
Q ss_pred EEEecCCCCCchhHHHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l 121 (186)
.|+++|.+|||||+.++.+.+.+
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l 24 (195)
T 2pbr_A 2 LIAFEGIDGSGKTTQAKKLYEYL 24 (195)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 48999999999999999999977
No 101
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=95.46 E-value=0.006 Score=46.78 Aligned_cols=26 Identities=31% Similarity=0.302 Sum_probs=23.3
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
..+.|.++|.+|||||+.++.+.+.+
T Consensus 20 ~~~~i~i~G~~GsGKSTl~~~L~~~~ 45 (207)
T 2qt1_A 20 KTFIIGISGVTNSGKTTLAKNLQKHL 45 (207)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHTTS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhc
Confidence 56789999999999999999998865
No 102
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=95.46 E-value=0.0098 Score=45.41 Aligned_cols=28 Identities=18% Similarity=0.324 Sum_probs=24.5
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.++..|+|+|-+|||||+.++.+.+.+.
T Consensus 7 ~~~~~I~l~G~~GsGKsT~~~~L~~~l~ 34 (215)
T 1nn5_A 7 RRGALIVLEGVDRAGKSTQSRKLVEALC 34 (215)
T ss_dssp CCCCEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3456899999999999999999998765
No 103
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=95.44 E-value=0.0093 Score=45.13 Aligned_cols=25 Identities=28% Similarity=0.461 Sum_probs=22.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
+...|.|+|.+|||||+.++.+.+.
T Consensus 7 ~~~~I~i~G~~GsGKST~~~~La~~ 31 (203)
T 1uf9_A 7 HPIIIGITGNIGSGKSTVAALLRSW 31 (203)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHHHT
T ss_pred CceEEEEECCCCCCHHHHHHHHHHC
Confidence 4567999999999999999998774
No 104
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=95.42 E-value=0.011 Score=45.10 Aligned_cols=26 Identities=27% Similarity=0.321 Sum_probs=22.5
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
+...|+|+|.+|||||+.++.+.+.+
T Consensus 14 ~~~~I~l~G~~GsGKsT~~~~L~~~~ 39 (203)
T 1ukz_A 14 QVSVIFVLGGPGAGKGTQCEKLVKDY 39 (203)
T ss_dssp TCEEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHc
Confidence 45679999999999999999998754
No 105
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=95.39 E-value=0.018 Score=46.23 Aligned_cols=28 Identities=25% Similarity=0.383 Sum_probs=24.9
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+..++|.|++|+|||+.++.+.+.+.
T Consensus 48 ~~~~~vll~G~~GtGKT~la~~la~~l~ 75 (310)
T 1ofh_A 48 VTPKNILMIGPTGVGKTEIARRLAKLAN 75 (310)
T ss_dssp CCCCCEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCCceEEEECCCCCCHHHHHHHHHHHhC
Confidence 4577899999999999999999998764
No 106
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=95.39 E-value=0.0087 Score=46.06 Aligned_cols=28 Identities=36% Similarity=0.405 Sum_probs=24.7
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+.++.+...+.
T Consensus 23 ~~G~~~~l~G~nGsGKSTll~~l~g~~~ 50 (231)
T 4a74_A 23 ETQAITEVFGEFGSGKTQLAHTLAVMVQ 50 (231)
T ss_dssp ESSEEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHHh
Confidence 4678999999999999999999988654
No 107
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=95.39 E-value=0.0095 Score=44.92 Aligned_cols=26 Identities=27% Similarity=0.326 Sum_probs=23.0
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...|++.|.+|||||+.++.+.+.+.
T Consensus 12 ~~~I~l~G~~GsGKsT~a~~L~~~l~ 37 (199)
T 2bwj_A 12 CKIIFIIGGPGSGKGTQCEKLVEKYG 37 (199)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 45799999999999999999988764
No 108
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=95.38 E-value=0.0095 Score=45.82 Aligned_cols=24 Identities=25% Similarity=0.379 Sum_probs=20.8
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|+|+|.+|||||+.++.+.+.+-
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~~ 25 (216)
T 3fb4_A 2 NIVLMGLPGAGKGTQAEQIIEKYE 25 (216)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 389999999999999999977553
No 109
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=95.34 E-value=0.023 Score=47.23 Aligned_cols=37 Identities=22% Similarity=0.271 Sum_probs=30.1
Q ss_pred HHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 86 SAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 86 ~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.........+..++|.|++|+|||+.++.+.+.+.
T Consensus 34 ~~l~~~~~~~~~~~vll~G~~G~GKT~la~~l~~~~~ 70 (384)
T 2qby_B 34 IAIRYFVKNEVKFSNLFLGLTGTGKTFVSKYIFNEIE 70 (384)
T ss_dssp HHHHHHHTTCCCCEEEEEECTTSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCcEEEECCCCCCHHHHHHHHHHHHH
Confidence 3444555566778999999999999999999999874
No 110
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=95.33 E-value=0.0052 Score=52.01 Aligned_cols=28 Identities=36% Similarity=0.544 Sum_probs=25.0
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.|+++|++|||||+..+.++.++.
T Consensus 173 ~~G~~i~ivG~sGsGKSTll~~l~~~~~ 200 (361)
T 2gza_A 173 QLERVIVVAGETGSGKTTLMKALMQEIP 200 (361)
T ss_dssp HTTCCEEEEESSSSCHHHHHHHHHTTSC
T ss_pred hcCCEEEEECCCCCCHHHHHHHHHhcCC
Confidence 4667899999999999999999999766
No 111
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=95.33 E-value=0.01 Score=46.33 Aligned_cols=26 Identities=31% Similarity=0.621 Sum_probs=23.1
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
.+.+.+.+.|++|||||+.++.++..
T Consensus 28 ~~G~~~~l~GpnGsGKSTLl~~i~~~ 53 (251)
T 2ehv_A 28 PEGTTVLLTGGTGTGKTTFAAQFIYK 53 (251)
T ss_dssp ETTCEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHHHHHHH
Confidence 36789999999999999999999853
No 112
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=95.31 E-value=0.01 Score=45.67 Aligned_cols=25 Identities=20% Similarity=0.365 Sum_probs=22.8
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.|.+.|.+|+|||+..+.+..++.
T Consensus 2 ~~i~i~G~nG~GKTTll~~l~g~~~ 26 (189)
T 2i3b_A 2 RHVFLTGPPGVGKTTLIHKASEVLK 26 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCChHHHHHHHHHhhcc
Confidence 4689999999999999999999875
No 113
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=95.30 E-value=0.0095 Score=43.38 Aligned_cols=27 Identities=22% Similarity=0.390 Sum_probs=23.3
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
..+..|+|.||+|+|||..++.+-+..
T Consensus 22 ~~~~~vll~G~~GtGKt~lA~~i~~~~ 48 (145)
T 3n70_A 22 ETDIAVWLYGAPGTGRMTGARYLHQFG 48 (145)
T ss_dssp TCCSCEEEESSTTSSHHHHHHHHHHSS
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHhC
Confidence 456679999999999999999887764
No 114
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=95.29 E-value=0.013 Score=45.82 Aligned_cols=37 Identities=22% Similarity=0.151 Sum_probs=28.9
Q ss_pred HHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHhhhcCC
Q psy18111 86 SAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIACATPG 127 (186)
Q Consensus 86 ~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~ 127 (186)
.++..+ ...+.+.+.|++|||||+..+.+... . ..+|
T Consensus 14 ~~l~~i---~~Ge~~~liG~nGsGKSTLl~~l~Gl-~-p~~G 50 (208)
T 3b85_A 14 HYVDAI---DTNTIVFGLGPAGSGKTYLAMAKAVQ-A-LQSK 50 (208)
T ss_dssp HHHHHH---HHCSEEEEECCTTSSTTHHHHHHHHH-H-HHTT
T ss_pred HHHHhc---cCCCEEEEECCCCCCHHHHHHHHhcC-C-CcCC
Confidence 344554 45778999999999999999999988 5 4444
No 115
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=95.29 E-value=0.027 Score=46.67 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=27.9
Q ss_pred HHHHHhhCCCe--EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 88 YRWLRDRSEDQ--CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 88 ~~~~~~~~~~Q--~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.........+. .++|.|++|+|||+.++.+.+.+.
T Consensus 33 l~~~~~~~~~~~~~~li~G~~G~GKTtl~~~l~~~~~ 69 (389)
T 1fnn_A 33 LGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYK 69 (389)
T ss_dssp HHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred HHHHHcCCCCCCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 33344445666 899999999999999999998875
No 116
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=95.29 E-value=0.021 Score=45.64 Aligned_cols=29 Identities=24% Similarity=0.266 Sum_probs=24.8
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
......++|.|++|+|||+.++.+.+.+-
T Consensus 61 ~~~~~~vLl~G~~GtGKT~la~~ia~~~~ 89 (272)
T 1d2n_A 61 RTPLVSVLLEGPPHSGKTALAAKIAEESN 89 (272)
T ss_dssp SCSEEEEEEECSTTSSHHHHHHHHHHHHT
T ss_pred CCCCeEEEEECCCCCcHHHHHHHHHHHhC
Confidence 45667899999999999999999988643
No 117
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=95.27 E-value=0.01 Score=44.95 Aligned_cols=26 Identities=27% Similarity=0.307 Sum_probs=23.2
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
++..|+|.|.+|||||+.++.+.+.+
T Consensus 3 ~~~~I~l~G~~GsGKsT~~~~L~~~l 28 (204)
T 2v54_A 3 RGALIVFEGLDKSGKTTQCMNIMESI 28 (204)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHTS
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHH
Confidence 35679999999999999999999876
No 118
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=95.27 E-value=0.032 Score=47.65 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=36.6
Q ss_pred CCchHHHhHHHHHHHHHh-hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 76 LPPHIFAIAGSAYRWLRD-RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 76 ~~PHi~~~a~~a~~~~~~-~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+-|.+......++..+.. -...+.|++.|.+|+|||+.++.+...+.
T Consensus 147 l~~~~~~~~~~~l~~~~~~i~~~~~i~l~G~~GsGKSTl~~~l~~~~~ 194 (377)
T 1svm_A 147 LLPKMDSVVYDFLKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLELCG 194 (377)
T ss_dssp TSTTHHHHHHHHHHHHHHCCTTCCEEEEECSTTSSHHHHHHHHHHHHC
T ss_pred hhhhhhHHHHHHHHhcccccCCCCEEEEECCCCCCHHHHHHHHHhhcC
Confidence 345666666677777643 46778999999999999999999998654
No 119
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=95.26 E-value=0.013 Score=44.32 Aligned_cols=25 Identities=32% Similarity=0.531 Sum_probs=22.3
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
+...|+++|.+|||||+.++.+.+.
T Consensus 9 ~~~~I~l~G~~GsGKSTv~~~La~~ 33 (184)
T 1y63_A 9 KGINILITGTPGTGKTSMAEMIAAE 33 (184)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHh
Confidence 3467999999999999999999887
No 120
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=95.25 E-value=0.011 Score=47.65 Aligned_cols=26 Identities=23% Similarity=0.414 Sum_probs=23.0
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.|+|.|.+|||||+.++.+.+.+-
T Consensus 48 g~~i~l~G~~GsGKSTl~~~La~~lg 73 (250)
T 3nwj_A 48 GRSMYLVGMMGSGKTTVGKIMARSLG 73 (250)
T ss_dssp TCCEEEECSTTSCHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhcC
Confidence 67899999999999999999988543
No 121
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii}
Probab=95.23 E-value=0.012 Score=45.46 Aligned_cols=24 Identities=17% Similarity=0.457 Sum_probs=21.7
Q ss_pred CCeEEEecCCCCCchhHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
....|+|+|+||+|||+.+..+++
T Consensus 15 ~G~gvli~G~SGaGKStlal~L~~ 38 (181)
T 3tqf_A 15 DKMGVLITGEANIGKSELSLALID 38 (181)
T ss_dssp TTEEEEEEESSSSSHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHH
Confidence 567899999999999999988887
No 122
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=95.22 E-value=0.014 Score=45.16 Aligned_cols=27 Identities=22% Similarity=0.292 Sum_probs=23.3
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+...|+|.|.+|||||+.++.+.+.+-
T Consensus 3 ~~~~I~l~G~~GsGKsT~a~~La~~l~ 29 (220)
T 1aky_A 3 ESIRMVLIGPPGAGKGTQAPNLQERFH 29 (220)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHcC
Confidence 445799999999999999999988754
No 123
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=95.22 E-value=0.014 Score=44.45 Aligned_cols=25 Identities=28% Similarity=0.122 Sum_probs=23.1
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..|.++|.+|||||+.+..+++.|.
T Consensus 5 ~~i~i~G~sGsGKTTl~~~L~~~l~ 29 (169)
T 1xjc_A 5 NVWQVVGYKHSGKTTLMEKWVAAAV 29 (169)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHhhH
Confidence 4789999999999999999999886
No 124
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=95.21 E-value=0.019 Score=48.01 Aligned_cols=24 Identities=17% Similarity=0.364 Sum_probs=22.1
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|.|.|.||||||+.++.+...+.
T Consensus 94 iigI~GpsGSGKSTl~~~L~~ll~ 117 (321)
T 3tqc_A 94 IIGIAGSVAVGKSTTSRVLKALLS 117 (321)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhc
Confidence 789999999999999999988775
No 125
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=95.19 E-value=0.016 Score=51.58 Aligned_cols=45 Identities=9% Similarity=0.059 Sum_probs=33.4
Q ss_pred CCchHHHhHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 76 LPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 76 ~~PHi~~~a~~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+|+|..+..++|.. ..++...|+|+|-||||||+.++.+-+.|.
T Consensus 376 ~rpeV~~vLr~~~~~--~~~~~~~I~l~GlsGsGKSTIa~~La~~L~ 420 (511)
T 1g8f_A 376 SYPEVVKILRESNPP--RPKQGFSIVLGNSLTVSREQLSIALLSTFL 420 (511)
T ss_dssp SCHHHHHHHHHHSCC--GGGCCEEEEECTTCCSCHHHHHHHHHHHHT
T ss_pred cChhhHHHHHHhccc--ccccceEEEecccCCCCHHHHHHHHHHHHH
Confidence 446666555555422 124557899999999999999999999987
No 126
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=95.18 E-value=0.01 Score=46.02 Aligned_cols=27 Identities=19% Similarity=0.316 Sum_probs=23.2
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+...|+|.|.+|||||+.++.+.+.+-
T Consensus 4 ~~~~I~l~G~~GsGKsT~~~~La~~l~ 30 (222)
T 1zak_A 4 DPLKVMISGAPASGKGTQCELIKTKYQ 30 (222)
T ss_dssp CSCCEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 345699999999999999999988764
No 127
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=95.17 E-value=0.018 Score=48.86 Aligned_cols=48 Identities=15% Similarity=0.160 Sum_probs=35.2
Q ss_pred hHHHhHHHHHHHHHhh-----------CCCeEEEecCCCCCchhHHHHHHHHHHhhhcCC
Q psy18111 79 HIFAIAGSAYRWLRDR-----------SEDQCIIVSGESGSGKTQAASMVVYFIACATPG 127 (186)
Q Consensus 79 Hi~~~a~~a~~~~~~~-----------~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~ 127 (186)
.+..+..+....++.. .+++.|.+.|.+|||||++++.+..++. ...+
T Consensus 128 ~~~~~l~~~l~~~l~~~~~~~~l~l~~~~g~vi~lvG~nGsGKTTll~~Lag~l~-~~~G 186 (359)
T 2og2_A 128 EIKDALKESVLEMLAKKNSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLK-NEGT 186 (359)
T ss_dssp HHHHHHHHHHHHHHCCC---CSCCCCSSSSEEEEEECCTTSCHHHHHHHHHHHHH-HTTC
T ss_pred HHHHHHHHHHHHHhCCcccCCCcceecCCCeEEEEEcCCCChHHHHHHHHHhhcc-ccCC
Confidence 4555555555555432 2467899999999999999999999987 4333
No 128
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=95.16 E-value=0.016 Score=44.45 Aligned_cols=28 Identities=25% Similarity=0.261 Sum_probs=24.8
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+++.|++|+|||+.++.+...+.
T Consensus 21 ~~G~~~~i~G~~GsGKTtl~~~l~~~~~ 48 (235)
T 2w0m_A 21 PQGFFIALTGEPGTGKTIFSLHFIAKGL 48 (235)
T ss_dssp ETTCEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 3667899999999999999999997776
No 129
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=95.16 E-value=0.01 Score=45.70 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=20.3
Q ss_pred EEEecCCCCCchhHHHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l 121 (186)
.|+|+|.+|||||+.++.+.+.+
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~ 24 (216)
T 3dl0_A 2 NLVLMGLPGAGKGTQGERIVEKY 24 (216)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 38999999999999999997754
No 130
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=95.15 E-value=0.014 Score=44.32 Aligned_cols=24 Identities=29% Similarity=0.423 Sum_probs=21.4
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|.|+|.+|||||+.++.+.+.+-
T Consensus 4 ~i~i~G~~GsGKst~~~~la~~lg 27 (208)
T 3ake_A 4 IVTIDGPSASGKSSVARRVAAALG 27 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHhcC
Confidence 689999999999999999988653
No 131
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=95.14 E-value=0.016 Score=45.92 Aligned_cols=27 Identities=22% Similarity=0.281 Sum_probs=23.5
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+..|+|.|++|+|||+.++.+.+.+.
T Consensus 44 ~~~~vll~G~~GtGKT~la~~la~~~~ 70 (257)
T 1lv7_A 44 IPKGVLMVGPPGTGKTLLAKAIAGEAK 70 (257)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred CCCeEEEECcCCCCHHHHHHHHHHHcC
Confidence 456799999999999999999988653
No 132
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=95.10 E-value=0.0075 Score=48.14 Aligned_cols=28 Identities=29% Similarity=0.454 Sum_probs=24.8
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.+.|.|++|||||+..+.+...+.
T Consensus 26 ~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~ 53 (243)
T 1mv5_A 26 QPNSIIAFAGPSGGGKSTIFSLLERFYQ 53 (243)
T ss_dssp CTTEEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 4678999999999999999999988765
No 133
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=95.09 E-value=0.0072 Score=47.49 Aligned_cols=26 Identities=23% Similarity=0.422 Sum_probs=22.8
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
.+...|.|.|.+|||||+.++.+..+
T Consensus 18 ~~g~~i~i~G~~GsGKSTl~~~L~~~ 43 (230)
T 2vp4_A 18 TQPFTVLIEGNIGSGKTTYLNHFEKY 43 (230)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGGG
T ss_pred CCceEEEEECCCCCCHHHHHHHHHhc
Confidence 35678999999999999999988775
No 134
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=95.08 E-value=0.025 Score=47.26 Aligned_cols=37 Identities=14% Similarity=-0.025 Sum_probs=31.9
Q ss_pred HHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 86 SAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 86 ~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+......++.+|+|+|.+|+|||.+++.+++-+.
T Consensus 34 ~~L~~~i~~~~~~~lli~GpPGTGKT~~v~~v~~~L~ 70 (318)
T 3te6_A 34 LPIYDSLMSSQNKLFYITNADDSTKFQLVNDVMDELI 70 (318)
T ss_dssp HHHHHHHHTTCCCEEEEECCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 3445556778999999999999999999999999886
No 135
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=95.08 E-value=0.017 Score=45.43 Aligned_cols=28 Identities=25% Similarity=0.239 Sum_probs=24.1
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+..|+|.|++|+|||+.++.+.+.+.
T Consensus 37 ~~~~~vll~G~~GtGKT~la~~la~~~~ 64 (262)
T 2qz4_A 37 KVPKGALLLGPPGCGKTLLAKAVATEAQ 64 (262)
T ss_dssp CCCCEEEEESCTTSSHHHHHHHHHHHHT
T ss_pred CCCceEEEECCCCCCHHHHHHHHHHHhC
Confidence 3566899999999999999999988654
No 136
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=95.07 E-value=0.0068 Score=49.23 Aligned_cols=27 Identities=15% Similarity=0.466 Sum_probs=24.4
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.+.|.|++|||||+..|.+...+.
T Consensus 36 ~Ge~~~liG~nGsGKSTLl~~l~Gl~~ 62 (266)
T 4g1u_C 36 SGEMVAIIGPNGAGKSTLLRLLTGYLS 62 (266)
T ss_dssp TTCEEEEECCTTSCHHHHHHHHTSSSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCCC
Confidence 678899999999999999999988765
No 137
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=95.05 E-value=0.013 Score=46.59 Aligned_cols=28 Identities=25% Similarity=0.375 Sum_probs=24.7
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 29 ~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~ 56 (237)
T 2cbz_A 29 PEGALVAVVGQVGCGKSSLLSALLAEMD 56 (237)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTCSE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 3678999999999999999999988764
No 138
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=95.04 E-value=0.013 Score=46.85 Aligned_cols=24 Identities=25% Similarity=0.248 Sum_probs=21.3
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|+|+|.+|||||+.++.+.+.+.
T Consensus 3 li~I~G~~GSGKSTla~~La~~~~ 26 (253)
T 2ze6_A 3 LHLIYGPTCSGKTDMAIQIAQETG 26 (253)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhcCC
Confidence 589999999999999999988654
No 139
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=95.01 E-value=0.018 Score=46.18 Aligned_cols=26 Identities=23% Similarity=0.354 Sum_probs=23.2
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...|+++|.+|||||+.++.+.+.|.
T Consensus 4 ~~lIvl~G~pGSGKSTla~~La~~L~ 29 (260)
T 3a4m_A 4 IMLIILTGLPGVGKSTFSKNLAKILS 29 (260)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 45799999999999999999998764
No 140
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=94.98 E-value=0.014 Score=46.86 Aligned_cols=27 Identities=30% Similarity=0.519 Sum_probs=24.2
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.+.|.|++|||||+..|.+...+.
T Consensus 34 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~~ 60 (247)
T 2ff7_A 34 QGEVIGIVGRSGSGKSTLTKLIQRFYI 60 (247)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 678899999999999999999988765
No 141
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=94.95 E-value=0.015 Score=46.61 Aligned_cols=25 Identities=16% Similarity=0.291 Sum_probs=23.2
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
+.+.+.|.|++|||||+..|.+...
T Consensus 28 ~Ge~~~l~G~nGsGKSTLlk~l~Gl 52 (250)
T 2d2e_A 28 KGEVHALMGPNGAGKSTLGKILAGD 52 (250)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCC
Confidence 6788999999999999999999986
No 142
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=94.91 E-value=0.015 Score=47.03 Aligned_cols=28 Identities=25% Similarity=0.402 Sum_probs=24.4
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 30 ~~Ge~~~liG~nGsGKSTLlk~l~Gl~~ 57 (262)
T 1b0u_A 30 RAGDVISIIGSSGSGKSTFLRCINFLEK 57 (262)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 3678899999999999999999887655
No 143
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=94.91 E-value=0.015 Score=46.94 Aligned_cols=28 Identities=25% Similarity=0.443 Sum_probs=24.9
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 44 ~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~ 71 (260)
T 2ghi_A 44 PSGTTCALVGHTGSGKSTIAKLLYRFYD 71 (260)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhccCC
Confidence 4778999999999999999999988754
No 144
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=94.90 E-value=0.016 Score=46.97 Aligned_cols=27 Identities=19% Similarity=0.240 Sum_probs=24.1
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.+.+.+.|.|++|||||+..|.+...+
T Consensus 44 ~~Ge~~~l~G~NGsGKSTLlk~l~Gl~ 70 (267)
T 2zu0_C 44 HPGEVHAIMGPNGSGKSTLSATLAGRE 70 (267)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHHTCT
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 367889999999999999999999874
No 145
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=94.89 E-value=0.013 Score=46.23 Aligned_cols=27 Identities=26% Similarity=0.384 Sum_probs=23.7
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.+.|.|++|||||+..|.+...+.
T Consensus 29 ~Ge~~~iiG~nGsGKSTLl~~l~Gl~~ 55 (224)
T 2pcj_A 29 KGEFVSIIGASGSGKSTLLYILGLLDA 55 (224)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 667899999999999999998887654
No 146
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=94.87 E-value=0.025 Score=49.21 Aligned_cols=37 Identities=19% Similarity=0.315 Sum_probs=30.6
Q ss_pred HHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 86 SAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 86 ~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..++.++...+..+++|.|++|+|||+.++.+.+.+.
T Consensus 39 ~~L~~~i~~~~~~~vLL~GppGtGKTtlAr~ia~~~~ 75 (447)
T 3pvs_A 39 KPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 (447)
T ss_dssp SHHHHHHHHTCCCEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCcEEEEECCCCCcHHHHHHHHHHHhC
Confidence 3455666667778999999999999999999998764
No 147
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=94.85 E-value=0.015 Score=47.55 Aligned_cols=28 Identities=14% Similarity=0.208 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 32 ~~Ge~~~iiGpnGsGKSTLl~~l~Gl~~ 59 (275)
T 3gfo_A 32 KRGEVTAILGGNGVGKSTLFQNFNGILK 59 (275)
T ss_dssp ETTSEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHHcCCC
Confidence 3678899999999999999999988765
No 148
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=94.85 E-value=0.025 Score=50.23 Aligned_cols=44 Identities=14% Similarity=0.235 Sum_probs=35.0
Q ss_pred hHHHhHHHHHHHHHhh---------CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 79 HIFAIAGSAYRWLRDR---------SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 79 Hi~~~a~~a~~~~~~~---------~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+..+....+..++.. ...+.|.|.|.+|||||++++.|..++.
T Consensus 266 ~~~~~l~~~l~~~l~~~~~~Isl~i~~GeVI~LVGpNGSGKTTLl~~LAgll~ 318 (503)
T 2yhs_A 266 ALYGLLKEEMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFE 318 (503)
T ss_dssp GHHHHHHHHHHHHHHTTBCCCCCCSCTTEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCceeeccCCeEEEEECCCcccHHHHHHHHHHHhh
Confidence 4666666666666542 3577999999999999999999999887
No 149
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=94.84 E-value=0.034 Score=44.94 Aligned_cols=28 Identities=21% Similarity=0.351 Sum_probs=24.7
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.....|+|.|++|+|||+.++.+.+.+.
T Consensus 65 ~~~~~vll~G~~GtGKT~la~~la~~l~ 92 (309)
T 3syl_A 65 TPTLHMSFTGNPGTGKTTVALKMAGLLH 92 (309)
T ss_dssp CCCCEEEEEECTTSSHHHHHHHHHHHHH
T ss_pred CCCceEEEECCCCCCHHHHHHHHHHHHH
Confidence 4555799999999999999999999886
No 150
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=94.84 E-value=0.0069 Score=50.38 Aligned_cols=28 Identities=25% Similarity=0.444 Sum_probs=25.3
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.+.|.|+||||||+..+.+..++.
T Consensus 78 ~~Ge~vaivG~sGsGKSTLl~ll~gl~~ 105 (306)
T 3nh6_A 78 MPGQTLALVGPSGAGKSTILRLLFRFYD 105 (306)
T ss_dssp CTTCEEEEESSSCHHHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCchHHHHHHHHHcCCC
Confidence 4778999999999999999999998765
No 151
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=94.84 E-value=0.016 Score=47.00 Aligned_cols=28 Identities=29% Similarity=0.422 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 48 ~~Gei~~liG~NGsGKSTLlk~l~Gl~~ 75 (263)
T 2olj_A 48 REGEVVVVIGPSGSGKSTFLRCLNLLED 75 (263)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEEcCCCCcHHHHHHHHHcCCC
Confidence 3778899999999999999999888654
No 152
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=94.83 E-value=0.016 Score=46.27 Aligned_cols=27 Identities=15% Similarity=0.377 Sum_probs=23.7
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+ +.+.+.|++|||||+..|.+...+.
T Consensus 23 ~~-e~~~liG~nGsGKSTLl~~l~Gl~~ 49 (240)
T 2onk_A 23 GR-DYCVLLGPTGAGKSVFLELIAGIVK 49 (240)
T ss_dssp CS-SEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CC-EEEEEECCCCCCHHHHHHHHhCCCC
Confidence 35 8899999999999999999988764
No 153
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=94.83 E-value=0.015 Score=44.90 Aligned_cols=23 Identities=26% Similarity=0.306 Sum_probs=20.8
Q ss_pred EEEecCCCCCchhHHHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l 121 (186)
.|+|.|.+|||||+.++.+.+.+
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~ 24 (214)
T 1e4v_A 2 RIILLGAPVAGKGTQAQFIMEKY 24 (214)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 48999999999999999998865
No 154
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=94.81 E-value=0.023 Score=44.85 Aligned_cols=27 Identities=30% Similarity=0.330 Sum_probs=24.7
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
....|+|.|.+|||||+.++.+.+.+.
T Consensus 25 ~g~~i~i~G~~GsGKsT~~~~l~~~l~ 51 (229)
T 4eaq_A 25 MSAFITFEGPEGSGKTTVINEVYHRLV 51 (229)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHHh
Confidence 557899999999999999999999886
No 155
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=94.81 E-value=0.016 Score=46.64 Aligned_cols=27 Identities=22% Similarity=0.517 Sum_probs=24.1
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.+.|.|++|||||+..|.+...+.
T Consensus 32 ~Ge~~~liG~nGsGKSTLlk~l~Gl~~ 58 (257)
T 1g6h_A 32 KGDVTLIIGPNGSGKSTLINVITGFLK 58 (257)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 678899999999999999999988765
No 156
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=94.78 E-value=0.036 Score=45.85 Aligned_cols=35 Identities=23% Similarity=0.271 Sum_probs=27.0
Q ss_pred HHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 88 YRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 88 ~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.......++-..++|.|++|+|||+.++.+.+.+.
T Consensus 37 L~~~i~~g~~~~~ll~Gp~G~GKTtla~~la~~l~ 71 (340)
T 1sxj_C 37 VRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIY 71 (340)
T ss_dssp HHHHHHTTCCCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCceEEEECCCCCCHHHHHHHHHHHHc
Confidence 33444444434499999999999999999999875
No 157
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=94.78 E-value=0.018 Score=45.53 Aligned_cols=25 Identities=28% Similarity=0.351 Sum_probs=21.9
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
+..++|.|++|+|||+.++.+...+
T Consensus 49 ~~g~ll~G~~G~GKTtl~~~i~~~~ 73 (254)
T 1ixz_A 49 PKGVLLVGPPGVGKTHLARAVAGEA 73 (254)
T ss_dssp CSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHh
Confidence 4559999999999999999998864
No 158
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=94.76 E-value=0.043 Score=44.32 Aligned_cols=35 Identities=20% Similarity=0.251 Sum_probs=27.9
Q ss_pred HHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 88 YRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 88 ~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+....+...++|.|++|+|||+.++.+.+.+.
T Consensus 37 l~~~l~~~~~~~~ll~G~~G~GKT~la~~l~~~l~ 71 (327)
T 1iqp_A 37 LKHYVKTGSMPHLLFAGPPGVGKTTAALALARELF 71 (327)
T ss_dssp HHHHHHHTCCCEEEEESCTTSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCeEEEECcCCCCHHHHHHHHHHHhc
Confidence 34455555655699999999999999999998864
No 159
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=94.76 E-value=0.017 Score=46.90 Aligned_cols=28 Identities=21% Similarity=0.383 Sum_probs=24.8
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.|...+.
T Consensus 43 ~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~ 70 (271)
T 2ixe_A 43 YPGKVTALVGPNGSGKSTVAALLQNLYQ 70 (271)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 4778899999999999999999988765
No 160
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=94.76 E-value=0.024 Score=45.76 Aligned_cols=26 Identities=23% Similarity=0.296 Sum_probs=23.5
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...++|.|++|+|||+.++.+.+.+.
T Consensus 47 ~~~~ll~G~~GtGKt~la~~la~~~~ 72 (311)
T 4fcw_A 47 IGSFLFLGPTGVGKTELAKTLAATLF 72 (311)
T ss_dssp SEEEEEESCSSSSHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCcCHHHHHHHHHHHHc
Confidence 35899999999999999999999875
No 161
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=94.75 E-value=0.019 Score=51.62 Aligned_cols=29 Identities=21% Similarity=0.264 Sum_probs=25.0
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.++...|+|+|.+|||||+.++.+-+.|.
T Consensus 393 gq~~~~I~l~GlsGSGKSTiA~~La~~L~ 421 (573)
T 1m8p_A 393 ATQGFTIFLTGYMNSGKDAIARALQVTLN 421 (573)
T ss_dssp TTCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred cccceEEEeecCCCCCHHHHHHHHHHHhc
Confidence 34556899999999999999999988876
No 162
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=94.73 E-value=0.018 Score=44.89 Aligned_cols=24 Identities=29% Similarity=0.415 Sum_probs=21.3
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|+|.|.+|||||+.++.+.+.+.
T Consensus 2 ~I~l~G~~GsGKsT~a~~La~~lg 25 (223)
T 2xb4_A 2 NILIFGPNGSGKGTQGNLVKDKYS 25 (223)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 489999999999999999988653
No 163
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=94.71 E-value=0.018 Score=46.56 Aligned_cols=28 Identities=36% Similarity=0.748 Sum_probs=24.3
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 31 ~~Ge~~~liG~nGsGKSTLl~~i~Gl~~ 58 (266)
T 2yz2_A 31 NEGECLLVAGNTGSGKSTLLQIVAGLIE 58 (266)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCcHHHHHHHHhCCCC
Confidence 3678899999999999999999887654
No 164
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=94.65 E-value=0.019 Score=46.33 Aligned_cols=28 Identities=25% Similarity=0.424 Sum_probs=24.3
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 39 ~~Gei~~l~G~NGsGKSTLlk~l~Gl~~ 66 (256)
T 1vpl_A 39 EEGEIFGLIGPNGAGKTTTLRIISTLIK 66 (256)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred cCCcEEEEECCCCCCHHHHHHHHhcCCC
Confidence 3678899999999999999999887654
No 165
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=94.65 E-value=0.024 Score=43.68 Aligned_cols=23 Identities=26% Similarity=0.388 Sum_probs=20.6
Q ss_pred CeEEEecCCCCCchhHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
+-.|+|+|.+|||||+.++.+-+
T Consensus 4 ~~~I~i~G~~GSGKST~~~~L~~ 26 (218)
T 1vht_A 4 RYIVALTGGIGSGKSTVANAFAD 26 (218)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHH
Confidence 45799999999999999999876
No 166
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=94.64 E-value=0.019 Score=45.42 Aligned_cols=28 Identities=29% Similarity=0.442 Sum_probs=24.5
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 32 ~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~ 59 (229)
T 2pze_A 32 ERGQLLAVAGSTGAGKTSLLMMIMGELE 59 (229)
T ss_dssp ETTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCCCc
Confidence 3678899999999999999999988754
No 167
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=94.64 E-value=0.022 Score=45.86 Aligned_cols=27 Identities=26% Similarity=0.322 Sum_probs=23.9
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+..|+|.|++|+|||+.++.+.+.+.
T Consensus 53 ~~~~vll~Gp~GtGKT~la~~la~~~~ 79 (297)
T 3b9p_A 53 PAKGLLLFGPPGNGKTLLARAVATECS 79 (297)
T ss_dssp CCSEEEEESSSSSCHHHHHHHHHHHTT
T ss_pred CCCeEEEECcCCCCHHHHHHHHHHHhC
Confidence 467899999999999999999988654
No 168
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=94.64 E-value=0.04 Score=47.73 Aligned_cols=38 Identities=16% Similarity=0.152 Sum_probs=29.0
Q ss_pred HHHHHHHHhhCC-CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 85 GSAYRWLRDRSE-DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 85 ~~a~~~~~~~~~-~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+...+..... ...++|.|++|+|||+.++.+.+.+.
T Consensus 117 ~~~~~~~a~~~~~~~~lll~Gp~G~GKTtLa~aia~~l~ 155 (440)
T 2z4s_A 117 YHAALEVAKHPGRYNPLFIYGGVGLGKTHLLQSIGNYVV 155 (440)
T ss_dssp HHHHHHHHHSTTSSCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 334444444332 67899999999999999999999886
No 169
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=94.64 E-value=0.015 Score=48.01 Aligned_cols=29 Identities=24% Similarity=0.410 Sum_probs=25.8
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
....+.++|.|++|+|||+.++.+.+.+.
T Consensus 42 ~~~~~~vli~G~~G~GKTtl~~~l~~~~~ 70 (386)
T 2qby_A 42 EEKPNNIFIYGLTGTGKTAVVKFVLSKLH 70 (386)
T ss_dssp TCCCCCEEEEECTTSSHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999998775
No 170
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=94.63 E-value=0.016 Score=44.09 Aligned_cols=21 Identities=33% Similarity=0.425 Sum_probs=19.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|.|+|.+|||||+.++.+.+
T Consensus 3 ~i~i~G~~GsGKSTl~~~L~~ 23 (204)
T 2if2_A 3 RIGLTGNIGCGKSTVAQMFRE 23 (204)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHH
Confidence 589999999999999999887
No 171
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=94.63 E-value=0.016 Score=45.56 Aligned_cols=27 Identities=19% Similarity=0.385 Sum_probs=23.7
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.+.|.|++|||||+..|.+...+.
T Consensus 34 ~Ge~~~iiG~NGsGKSTLlk~l~Gl~~ 60 (214)
T 1sgw_A 34 KGNVVNFHGPNGIGKTTLLKTISTYLK 60 (214)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 667899999999999999999887654
No 172
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=94.63 E-value=0.045 Score=45.33 Aligned_cols=25 Identities=24% Similarity=0.517 Sum_probs=23.5
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..++|.|++|+|||..++.+.+.+.
T Consensus 71 ~~vLl~GppGtGKT~la~~la~~l~ 95 (368)
T 3uk6_A 71 RAVLIAGQPGTGKTAIAMGMAQALG 95 (368)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhc
Confidence 6999999999999999999999876
No 173
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=94.62 E-value=0.012 Score=48.66 Aligned_cols=29 Identities=24% Similarity=0.387 Sum_probs=25.9
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.....+++|.|++|+|||+.++.+.+.+.
T Consensus 41 ~~~~~~vll~G~~G~GKT~l~~~~~~~~~ 69 (387)
T 2v1u_A 41 GEKPSNALLYGLTGTGKTAVARLVLRRLE 69 (387)
T ss_dssp SCCCCCEEECBCTTSSHHHHHHHHHHHHH
T ss_pred CCCCCcEEEECCCCCCHHHHHHHHHHHHH
Confidence 45678899999999999999999999874
No 174
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=94.59 E-value=0.02 Score=45.62 Aligned_cols=27 Identities=26% Similarity=0.454 Sum_probs=23.9
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.+.|.|++|||||+..|.+...+.
T Consensus 31 ~Ge~~~l~G~nGsGKSTLl~~l~Gl~~ 57 (240)
T 1ji0_A 31 RGQIVTLIGANGAGKTTTLSAIAGLVR 57 (240)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 667899999999999999999888654
No 175
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=94.58 E-value=0.027 Score=44.07 Aligned_cols=27 Identities=19% Similarity=0.272 Sum_probs=23.6
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
....|+|.|..|||||+.++.+.+.+.
T Consensus 15 ~~~~I~l~G~~GsGKsT~a~~La~~l~ 41 (233)
T 1ak2_A 15 KGVRAVLLGPPGAGKGTQAPKLAKNFC 41 (233)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 456799999999999999999988764
No 176
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=94.57 E-value=0.035 Score=44.05 Aligned_cols=27 Identities=33% Similarity=0.552 Sum_probs=23.3
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+..|+|.||+|+|||+.++.+.+.+.
T Consensus 28 ~~~~vll~G~~GtGKt~la~~i~~~~~ 54 (265)
T 2bjv_A 28 LDKPVLIIGERGTGKELIASRLHYLSS 54 (265)
T ss_dssp SCSCEEEECCTTSCHHHHHHHHHHTST
T ss_pred CCCCEEEECCCCCcHHHHHHHHHHhcC
Confidence 456799999999999999999987654
No 177
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=94.56 E-value=0.028 Score=46.59 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=33.3
Q ss_pred HHHhHHHHHHHHHhh--------CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 80 IFAIAGSAYRWLRDR--------SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 80 i~~~a~~a~~~~~~~--------~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..+..+....++.. ..++.|.+.|.+|+|||++++.+..++.
T Consensus 79 ~~~~~~~~l~~~l~~~~~~~~~~~~~~vi~ivG~~GsGKTTl~~~LA~~l~ 129 (306)
T 1vma_A 79 ALESLKEIILEILNFDTKLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFV 129 (306)
T ss_dssp HHHHHHHHHHHHTCSCCCCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcccCCCCeEEEEEcCCCChHHHHHHHHHHHHH
Confidence 555555665555532 3457899999999999999999999987
No 178
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=94.56 E-value=0.019 Score=46.69 Aligned_cols=24 Identities=29% Similarity=0.387 Sum_probs=21.8
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.|++|||||+..+.+.....
T Consensus 4 ~v~lvG~nGaGKSTLln~L~g~~~ 27 (270)
T 3sop_A 4 NIMVVGQSGLGKSTLVNTLFKSQV 27 (270)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhCCCC
Confidence 478999999999999999999776
No 179
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=94.54 E-value=0.021 Score=48.92 Aligned_cols=28 Identities=25% Similarity=0.439 Sum_probs=24.7
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|+||||||+..|.|...+.
T Consensus 27 ~~Ge~~~llGpsGsGKSTLLr~iaGl~~ 54 (381)
T 3rlf_A 27 HEGEFVVFVGPSGCGKSTLLRMIAGLET 54 (381)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCCCEEEEEcCCCchHHHHHHHHHcCCC
Confidence 3668899999999999999999988765
No 180
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=94.54 E-value=0.017 Score=47.79 Aligned_cols=25 Identities=20% Similarity=0.214 Sum_probs=22.0
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
-+.++|+|.+|||||+..+.++...
T Consensus 4 i~v~~i~G~~GaGKTTll~~l~~~~ 28 (318)
T 1nij_A 4 IAVTLLTGFLGAGKTTLLRHILNEQ 28 (318)
T ss_dssp EEEEEEEESSSSSCHHHHHHHHHSC
T ss_pred ccEEEEEecCCCCHHHHHHHHHhhc
Confidence 3578999999999999999999864
No 181
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=94.51 E-value=0.019 Score=43.76 Aligned_cols=21 Identities=33% Similarity=0.453 Sum_probs=19.2
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|.|.|.+|||||+.++.+.+
T Consensus 4 ~i~l~G~~GsGKST~~~~La~ 24 (206)
T 1jjv_A 4 IVGLTGGIGSGKTTIANLFTD 24 (206)
T ss_dssp EEEEECSTTSCHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 588999999999999999876
No 182
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=94.50 E-value=0.026 Score=45.17 Aligned_cols=28 Identities=29% Similarity=0.334 Sum_probs=24.4
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+..++|.|++|+|||+.++.+.+.+.
T Consensus 49 ~~~~~~ll~G~~GtGKT~la~~la~~~~ 76 (285)
T 3h4m_A 49 EPPKGILLYGPPGTGKTLLAKAVATETN 76 (285)
T ss_dssp CCCSEEEEESSSSSSHHHHHHHHHHHTT
T ss_pred CCCCeEEEECCCCCcHHHHHHHHHHHhC
Confidence 4677899999999999999999987654
No 183
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=94.48 E-value=0.026 Score=44.79 Aligned_cols=27 Identities=33% Similarity=0.443 Sum_probs=23.1
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
....|.|+|.+|||||+.++.+.+.|.
T Consensus 21 ~~~iI~I~G~~GSGKST~a~~L~~~lg 47 (252)
T 1uj2_A 21 EPFLIGVSGGTASGKSSVCAKIVQLLG 47 (252)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred CcEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 445799999999999999999988654
No 184
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=94.45 E-value=0.011 Score=52.41 Aligned_cols=27 Identities=37% Similarity=0.570 Sum_probs=24.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+.|+++|++|||||++.+.++.++.
T Consensus 259 ~g~~i~I~GptGSGKTTlL~aL~~~i~ 285 (511)
T 2oap_1 259 HKFSAIVVGETASGKTTTLNAIMMFIP 285 (511)
T ss_dssp TTCCEEEEESTTSSHHHHHHHHGGGSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhCC
Confidence 456699999999999999999998875
No 185
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=94.44 E-value=0.019 Score=47.02 Aligned_cols=27 Identities=22% Similarity=0.348 Sum_probs=20.1
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.-.|.|+|.||||||+.++.+.+.+.
T Consensus 4 ~~~iIgItG~sGSGKSTva~~L~~~lg 30 (290)
T 1a7j_A 4 KHPIISVTGSSGAGTSTVKHTFDQIFR 30 (290)
T ss_dssp TSCEEEEESCC---CCTHHHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHHh
Confidence 345799999999999999999988664
No 186
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=94.44 E-value=0.01 Score=43.13 Aligned_cols=26 Identities=19% Similarity=0.195 Sum_probs=21.4
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
..+..|+|.||+|+|||..++.+-+.
T Consensus 25 ~~~~~vll~G~~GtGKt~lA~~i~~~ 50 (143)
T 3co5_A 25 KRTSPVFLTGEAGSPFETVARYFHKN 50 (143)
T ss_dssp TCSSCEEEEEETTCCHHHHHGGGCCT
T ss_pred CCCCcEEEECCCCccHHHHHHHHHHh
Confidence 35567999999999999998877653
No 187
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=94.44 E-value=0.022 Score=46.94 Aligned_cols=24 Identities=21% Similarity=0.373 Sum_probs=21.5
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.++|.|++|+|||+.++.+.+.+.
T Consensus 38 ~~ll~Gp~G~GKTtl~~~la~~l~ 61 (354)
T 1sxj_E 38 HLLLYGPNGTGKKTRCMALLESIF 61 (354)
T ss_dssp CEEEECSTTSSHHHHHHTHHHHHS
T ss_pred eEEEECCCCCCHHHHHHHHHHHHc
Confidence 399999999999999999999654
No 188
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=94.41 E-value=0.034 Score=45.56 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=26.9
Q ss_pred HHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 88 YRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 88 ~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
............++|.|++|+|||+.++.+.+.+.
T Consensus 49 l~~~l~~~~~~~~ll~G~~G~GKT~la~~la~~l~ 83 (353)
T 1sxj_D 49 LKKTLKSANLPHMLFYGPPGTGKTSTILALTKELY 83 (353)
T ss_dssp HHHHTTCTTCCCEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 34444444434599999999999999999999875
No 189
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=94.38 E-value=0.027 Score=45.96 Aligned_cols=28 Identities=21% Similarity=0.313 Sum_probs=24.0
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+..|+|.|++|+|||+.++.+.+.+.
T Consensus 47 ~~~~~vLL~Gp~GtGKT~la~ala~~~~ 74 (301)
T 3cf0_A 47 TPSKGVLFYGPPGCGKTLLAKAIANECQ 74 (301)
T ss_dssp CCCSEEEEECSSSSSHHHHHHHHHHHTT
T ss_pred CCCceEEEECCCCcCHHHHHHHHHHHhC
Confidence 4567899999999999999999887643
No 190
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=94.38 E-value=0.061 Score=44.57 Aligned_cols=27 Identities=22% Similarity=0.368 Sum_probs=24.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.....++|.|++|+|||+.++.+...+
T Consensus 49 ~~~~~~ll~Gp~G~GKTTLa~~ia~~l 75 (334)
T 1in4_A 49 EVLDHVLLAGPPGLGKTTLAHIIASEL 75 (334)
T ss_dssp CCCCCEEEESSTTSSHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCcHHHHHHHHHHHh
Confidence 344789999999999999999999987
No 191
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=94.38 E-value=0.023 Score=45.64 Aligned_cols=27 Identities=19% Similarity=0.375 Sum_probs=23.9
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.+.|.|++|||||+..+.+...+.
T Consensus 30 ~Ge~~~l~G~nGsGKSTLl~~l~Gl~~ 56 (253)
T 2nq2_C 30 KGDILAVLGQNGCGKSTLLDLLLGIHR 56 (253)
T ss_dssp TTCEEEEECCSSSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 678899999999999999999888654
No 192
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=94.36 E-value=0.023 Score=46.42 Aligned_cols=27 Identities=22% Similarity=0.338 Sum_probs=24.2
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.+.|.|++|||||+..|.+...+.
T Consensus 46 ~Ge~~~liG~NGsGKSTLlk~l~Gl~~ 72 (279)
T 2ihy_A 46 KGDKWILYGLNGAGKTTLLNILNAYEP 72 (279)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCCC
Confidence 678899999999999999999988765
No 193
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=94.35 E-value=0.064 Score=44.23 Aligned_cols=29 Identities=24% Similarity=0.327 Sum_probs=25.2
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+..++|.|++|+|||+.++.+.+.+.
T Consensus 35 ~~~~~~~ll~G~~G~GKT~la~~la~~l~ 63 (373)
T 1jr3_A 35 GRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 (373)
T ss_dssp TCCCSEEEEESCTTSSHHHHHHHHHHHHS
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 34467899999999999999999998875
No 194
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=94.33 E-value=0.024 Score=45.56 Aligned_cols=28 Identities=14% Similarity=0.296 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 24 ~~Ge~~~liG~NGsGKSTLlk~l~Gl~~ 51 (249)
T 2qi9_C 24 RAGEILHLVGPNGAGKSTLLARMAGMTS 51 (249)
T ss_dssp ETTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCcHHHHHHHHhCCCC
Confidence 3677899999999999999999988765
No 195
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=94.31 E-value=0.027 Score=45.51 Aligned_cols=23 Identities=30% Similarity=0.346 Sum_probs=20.9
Q ss_pred eEEEecCCCCCchhHHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
..|+++|.+|||||+.++.+.+.
T Consensus 3 ~~I~l~G~~GsGKST~a~~L~~~ 25 (301)
T 1ltq_A 3 KIILTIGCPGSGKSTWAREFIAK 25 (301)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHh
Confidence 56999999999999999999874
No 196
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=94.31 E-value=0.029 Score=45.38 Aligned_cols=29 Identities=21% Similarity=0.245 Sum_probs=26.3
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
-...+.++|.|++|+|||+.++.+...+.
T Consensus 32 l~~G~~~~i~G~~G~GKTTl~~~ia~~~~ 60 (296)
T 1cr0_A 32 ARGGEVIMVTSGSGMGKSTFVRQQALQWG 60 (296)
T ss_dssp BCTTCEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 35778999999999999999999999887
No 197
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=94.30 E-value=0.022 Score=47.88 Aligned_cols=26 Identities=15% Similarity=0.275 Sum_probs=24.1
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.|.|++|||||+.++.+..++.
T Consensus 170 g~k~~IvG~nGsGKSTLlk~L~gl~~ 195 (365)
T 1lw7_A 170 AKTVAILGGESSGKSVLVNKLAAVFN 195 (365)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTT
T ss_pred hCeEEEECCCCCCHHHHHHHHHHHhC
Confidence 67899999999999999999999876
No 198
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=94.29 E-value=0.032 Score=44.92 Aligned_cols=31 Identities=26% Similarity=0.349 Sum_probs=24.9
Q ss_pred HhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 92 RDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 92 ~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+....++|.|++|+|||+.++.+.+.+.
T Consensus 33 l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~ 63 (319)
T 2chq_A 33 VERKNIPHLLFSGPPGTGKTATAIALARDLF 63 (319)
T ss_dssp TTTTCCCCEEEESSSSSSHHHHHHHHHHHHH
T ss_pred HhCCCCCeEEEECcCCcCHHHHHHHHHHHhc
Confidence 3344444599999999999999999998863
No 199
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=94.28 E-value=0.027 Score=45.25 Aligned_cols=25 Identities=28% Similarity=0.351 Sum_probs=21.9
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
+..|+|.|++|+|||+.++.+...+
T Consensus 73 ~~gvll~Gp~GtGKTtl~~~i~~~~ 97 (278)
T 1iy2_A 73 PKGVLLVGPPGVGKTHLARAVAGEA 97 (278)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCeEEEECCCcChHHHHHHHHHHHc
Confidence 4459999999999999999998864
No 200
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=94.23 E-value=0.032 Score=44.52 Aligned_cols=27 Identities=19% Similarity=0.368 Sum_probs=22.9
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+-.|.|.|.+|||||+.++.+.+.+.
T Consensus 8 ~~~~i~i~G~~GsGKsTla~~la~~lg 34 (233)
T 3r20_A 8 GSLVVAVDGPAGTGKSSVSRGLARALG 34 (233)
T ss_dssp -CCEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 345799999999999999999988764
No 201
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=94.20 E-value=0.025 Score=48.13 Aligned_cols=28 Identities=25% Similarity=0.383 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|+||||||+..|.|..++.
T Consensus 28 ~~Ge~~~llGpsGsGKSTLLr~iaGl~~ 55 (359)
T 3fvq_A 28 DPGEILFIIGASGCGKTTLLRCLAGFEQ 55 (359)
T ss_dssp CTTCEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred cCCCEEEEECCCCchHHHHHHHHhcCCC
Confidence 3668899999999999999999988765
No 202
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=94.19 E-value=0.025 Score=43.80 Aligned_cols=25 Identities=24% Similarity=0.375 Sum_probs=22.1
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..|+|.|.+|||||+.++.+.+.+-
T Consensus 6 ~~I~l~G~~GsGKsT~a~~La~~l~ 30 (217)
T 3be4_A 6 HNLILIGAPGSGKGTQCEFIKKEYG 30 (217)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHHC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4699999999999999999988653
No 203
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=94.17 E-value=0.063 Score=41.16 Aligned_cols=34 Identities=24% Similarity=0.212 Sum_probs=27.3
Q ss_pred HHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 89 RWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 89 ~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+....+...|++.|.+|+|||+....++..+.
T Consensus 30 r~~~~~~~~~~i~ivG~~gvGKTtl~~~l~~~~~ 63 (226)
T 2hf9_A 30 RKLLNKHGVVAFDFMGAIGSGKTLLIEKLIDNLK 63 (226)
T ss_dssp HHHHHHTTCEEEEEEESTTSSHHHHHHHHHHHHT
T ss_pred HHHHHhCCCeEEEEEcCCCCCHHHHHHHHHHHhc
Confidence 4444556677899999999999999999988754
No 204
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=94.17 E-value=0.031 Score=42.59 Aligned_cols=25 Identities=28% Similarity=0.145 Sum_probs=22.5
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
...+.+++.|++|+|||+.++.+..
T Consensus 18 ~~G~~~~i~G~~GsGKTtl~~~l~~ 42 (220)
T 2cvh_A 18 APGVLTQVYGPYASGKTTLALQTGL 42 (220)
T ss_dssp CTTSEEEEECSTTSSHHHHHHHHHH
T ss_pred cCCEEEEEECCCCCCHHHHHHHHHH
Confidence 4677899999999999999999887
No 205
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=94.16 E-value=0.039 Score=43.24 Aligned_cols=27 Identities=22% Similarity=0.324 Sum_probs=23.3
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.+...|.|.|.+|||||+.++.+.+.|
T Consensus 14 ~~~~~i~i~G~~gsGKst~~~~l~~~l 40 (236)
T 1q3t_A 14 MKTIQIAIDGPASSGKSTVAKIIAKDF 40 (236)
T ss_dssp CCCCEEEEECSSCSSHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHHc
Confidence 456689999999999999999988754
No 206
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=94.13 E-value=0.012 Score=49.18 Aligned_cols=28 Identities=36% Similarity=0.551 Sum_probs=24.4
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.+.+.|.+|||||+..+.++.++.
T Consensus 169 ~~g~~v~i~G~~GsGKTTll~~l~g~~~ 196 (330)
T 2pt7_A 169 AIGKNVIVCGGTGSGKTTYIKSIMEFIP 196 (330)
T ss_dssp HHTCCEEEEESTTSCHHHHHHHGGGGSC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCCCc
Confidence 3456899999999999999999998765
No 207
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=94.10 E-value=0.11 Score=42.36 Aligned_cols=56 Identities=18% Similarity=0.208 Sum_probs=35.8
Q ss_pred HHHHhcCCCCCCCchHHHhHHHHHHHHHh-hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 65 ARAYRTRGPFQLPPHIFAIAGSAYRWLRD-RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 65 ~~~y~~~~~~~~~PHi~~~a~~a~~~~~~-~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+|+.....++.-|--. .+..+.... .+.+..+++.|++|+|||+.++.+.+.+-
T Consensus 17 ~~k~rP~~~~~ivg~~~~--~~~l~~~l~~~~~~~~~L~~G~~G~GKT~la~~la~~l~ 73 (324)
T 3u61_B 17 EQKYRPSTIDECILPAFD--KETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVN 73 (324)
T ss_dssp HHHSCCCSTTTSCCCHHH--HHHHHHHHHTTCCCSEEEECSSTTSSHHHHHHHHHHHTT
T ss_pred HHhhCCCCHHHHhCcHHH--HHHHHHHHHcCCCCeEEEeeCcCCCCHHHHHHHHHHHhC
Confidence 456665555554433221 133334433 44556788999999999999999988653
No 208
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=94.09 E-value=0.022 Score=45.25 Aligned_cols=27 Identities=26% Similarity=0.282 Sum_probs=23.3
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+..|+|.|++|+|||+.++.+.+.+.
T Consensus 43 ~~~~vll~G~~GtGKT~la~~la~~~~ 69 (268)
T 2r62_A 43 IPKGVLLVGPPGTGKTLLAKAVAGEAH 69 (268)
T ss_dssp CCSCCCCBCSSCSSHHHHHHHHHHHHT
T ss_pred CCceEEEECCCCCcHHHHHHHHHHHhC
Confidence 355699999999999999999988754
No 209
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=94.09 E-value=0.03 Score=47.69 Aligned_cols=28 Identities=29% Similarity=0.277 Sum_probs=24.5
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|+||||||+..|.+...+.
T Consensus 52 ~~Gei~~IiGpnGaGKSTLlr~i~GL~~ 79 (366)
T 3tui_C 52 PAGQIYGVIGASGAGKSTLIRCVNLLER 79 (366)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred cCCCEEEEEcCCCchHHHHHHHHhcCCC
Confidence 3678899999999999999999888665
No 210
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=94.05 E-value=0.056 Score=43.52 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=26.6
Q ss_pred HHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 88 YRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 88 ~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
........+...++|.|++|+|||+.++.+.+.+.
T Consensus 33 l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~ 67 (323)
T 1sxj_B 33 LQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELL 67 (323)
T ss_dssp HHHHHHSCCCCCEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCeEEEECcCCCCHHHHHHHHHHHhc
Confidence 33444444444499999999999999999998864
No 211
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=94.04 E-value=0.063 Score=45.63 Aligned_cols=41 Identities=27% Similarity=0.490 Sum_probs=29.9
Q ss_pred HhHHHHHHHHH---hhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 82 AIAGSAYRWLR---DRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 82 ~~a~~a~~~~~---~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+++.+...+. ..++-..|+|.|.+|+|||+.++.+.+.+.
T Consensus 6 ~L~~~il~~l~~~i~~g~~~~i~l~G~~G~GKTTl~~~la~~l~ 49 (359)
T 2ga8_A 6 KLADDVLQLLDNRIEDNYRVCVILVGSPGSGKSTIAEELCQIIN 49 (359)
T ss_dssp HHHHHHHHHHHHTTTTCSCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCeeEEEEECCCCCcHHHHHHHHHHHhC
Confidence 45566655553 233445699999999999999998888665
No 212
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=94.03 E-value=0.032 Score=47.38 Aligned_cols=28 Identities=25% Similarity=0.388 Sum_probs=24.5
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|+||||||+..|.|..++.
T Consensus 27 ~~Ge~~~llGpnGsGKSTLLr~iaGl~~ 54 (359)
T 2yyz_A 27 KDGEFVALLGPSGCGKTTTLLMLAGIYK 54 (359)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHHTSSC
T ss_pred cCCCEEEEEcCCCchHHHHHHHHHCCCC
Confidence 3678899999999999999999988765
No 213
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=93.98 E-value=0.033 Score=47.35 Aligned_cols=28 Identities=21% Similarity=0.332 Sum_probs=24.5
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|+||||||+..|.|..++.
T Consensus 27 ~~Ge~~~llGpnGsGKSTLLr~iaGl~~ 54 (362)
T 2it1_A 27 KDGEFMALLGPSGSGKSTLLYTIAGIYK 54 (362)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCCCEEEEECCCCchHHHHHHHHhcCCC
Confidence 3678899999999999999999988765
No 214
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=93.97 E-value=0.037 Score=45.54 Aligned_cols=27 Identities=22% Similarity=0.416 Sum_probs=25.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.|++.|.+|+|||++++.+..++.
T Consensus 104 ~g~vi~lvG~~GsGKTTl~~~LA~~l~ 130 (296)
T 2px0_A 104 HSKYIVLFGSTGAGKTTTLAKLAAISM 130 (296)
T ss_dssp CSSEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHH
Confidence 567899999999999999999999887
No 215
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=93.97 E-value=0.025 Score=48.65 Aligned_cols=28 Identities=14% Similarity=0.245 Sum_probs=23.7
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+..|+++|.+|||||+.++.+.+.+-
T Consensus 256 ~~~~lIil~G~pGSGKSTla~~L~~~~~ 283 (416)
T 3zvl_A 256 PNPEVVVAVGFPGAGKSTFIQEHLVSAG 283 (416)
T ss_dssp SSCCEEEEESCTTSSHHHHHHHHTGGGT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHhcC
Confidence 3567899999999999999999887553
No 216
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=93.90 E-value=0.034 Score=48.32 Aligned_cols=38 Identities=21% Similarity=0.147 Sum_probs=33.4
Q ss_pred HHHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 85 GSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 85 ~~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+...++.-.+.|.+.|.|.||+|||+..+.|..++.
T Consensus 145 ~~vld~vl~i~~Gq~~~IvG~sGsGKSTLl~~Iag~~~ 182 (438)
T 2dpy_A 145 VRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTR 182 (438)
T ss_dssp CHHHHHHSCCBTTCEEEEEECTTSSHHHHHHHHHHHSC
T ss_pred ceEEeeeEEecCCCEEEEECCCCCCHHHHHHHHhcccC
Confidence 45777887778999999999999999999999999865
No 217
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=93.89 E-value=0.034 Score=47.17 Aligned_cols=28 Identities=29% Similarity=0.364 Sum_probs=24.5
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|+||||||+..|.|...+.
T Consensus 39 ~~Ge~~~llGpnGsGKSTLLr~iaGl~~ 66 (355)
T 1z47_A 39 REGEMVGLLGPSGSGKTTILRLIAGLER 66 (355)
T ss_dssp ETTCEEEEECSTTSSHHHHHHHHHTSSC
T ss_pred CCCCEEEEECCCCCcHHHHHHHHhCCCC
Confidence 3678899999999999999999988765
No 218
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=93.89 E-value=0.066 Score=43.86 Aligned_cols=28 Identities=32% Similarity=0.478 Sum_probs=23.6
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.....|+|.|++|+|||+.++.+.+.+.
T Consensus 53 ~~~~~vll~G~~GtGKT~la~~ia~~~~ 80 (338)
T 3pfi_A 53 ECLDHILFSGPAGLGKTTLANIISYEMS 80 (338)
T ss_dssp SCCCCEEEECSTTSSHHHHHHHHHHHTT
T ss_pred CCCCeEEEECcCCCCHHHHHHHHHHHhC
Confidence 4556799999999999999999977643
No 219
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=93.89 E-value=0.057 Score=43.80 Aligned_cols=28 Identities=21% Similarity=0.323 Sum_probs=24.1
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+..++|.|++|+|||+.++.+.+.+.
T Consensus 36 ~~~~~vll~G~~GtGKT~la~~i~~~~~ 63 (324)
T 1hqc_A 36 EPLEHLLLFGPPGLGKTTLAHVIAHELG 63 (324)
T ss_dssp SCCCCCEEECCTTCCCHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHHHhC
Confidence 3557899999999999999999988654
No 220
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=93.89 E-value=0.036 Score=42.95 Aligned_cols=27 Identities=22% Similarity=0.176 Sum_probs=23.5
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.+.+.++|.|++|+|||+.++.+....
T Consensus 22 ~~G~~~~i~G~~GsGKTtl~~~l~~~~ 48 (243)
T 1n0w_A 22 ETGSITEMFGEFRTGKTQICHTLAVTC 48 (243)
T ss_dssp ETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred cCCeEEEEECCCCCcHHHHHHHHHHHH
Confidence 367889999999999999999988753
No 221
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=93.87 E-value=0.048 Score=42.70 Aligned_cols=27 Identities=15% Similarity=0.310 Sum_probs=24.5
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..-|+|.|.+|||||+.++.+.++|.
T Consensus 5 ~g~~i~~eG~~gsGKsT~~~~l~~~l~ 31 (213)
T 4edh_A 5 TGLFVTLEGPEGAGKSTNRDYLAERLR 31 (213)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CceEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 356799999999999999999999986
No 222
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=93.85 E-value=0.037 Score=43.13 Aligned_cols=24 Identities=21% Similarity=0.288 Sum_probs=21.4
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.|+|.|..||||++.++.+.+.+-
T Consensus 2 ~Iil~GpPGsGKgTqa~~La~~~g 25 (206)
T 3sr0_A 2 ILVFLGPPGAGKGTQAKRLAKEKG 25 (206)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
Confidence 388999999999999999998764
No 223
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=93.85 E-value=0.039 Score=46.16 Aligned_cols=29 Identities=28% Similarity=0.313 Sum_probs=24.7
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+..|+|+|.+|||||+.+..+.+.+.
T Consensus 7 ~~~~~~i~i~GptgsGKt~la~~La~~~~ 35 (316)
T 3foz_A 7 ASLPKAIFLMGPTASGKTALAIELRKILP 35 (316)
T ss_dssp CCCCEEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred CCCCcEEEEECCCccCHHHHHHHHHHhCC
Confidence 34567899999999999999999998764
No 224
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=93.84 E-value=0.067 Score=40.85 Aligned_cols=32 Identities=25% Similarity=0.227 Sum_probs=25.6
Q ss_pred HHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 91 LRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 91 ~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+....+.-.|++.|.+|+|||+.+..++..+.
T Consensus 24 ~~~~~~~~~i~i~G~~g~GKTTl~~~l~~~~~ 55 (221)
T 2wsm_A 24 ALRESGTVAVNIMGAIGSGKTLLIERTIERIG 55 (221)
T ss_dssp HHHHHTCEEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred hhcccCceEEEEEcCCCCCHHHHHHHHHHHhc
Confidence 33344566899999999999999999988753
No 225
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=93.84 E-value=0.033 Score=45.12 Aligned_cols=25 Identities=28% Similarity=0.465 Sum_probs=22.2
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.+.+.+.|++|||||+..|.+...+
T Consensus 30 Ge~~~i~G~NGsGKSTLlk~l~Gl~ 54 (263)
T 2pjz_A 30 GEKVIILGPNGSGKTTLLRAISGLL 54 (263)
T ss_dssp SSEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEEECCCCCCHHHHHHHHhCCC
Confidence 6789999999999999999988754
No 226
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=93.82 E-value=0.049 Score=42.93 Aligned_cols=28 Identities=29% Similarity=0.394 Sum_probs=23.9
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+...|++.|..||||++.++.+.+.+-
T Consensus 27 ~k~kiI~llGpPGsGKgTqa~~L~~~~g 54 (217)
T 3umf_A 27 AKAKVIFVLGGPGSGKGTQCEKLVQKFH 54 (217)
T ss_dssp TSCEEEEEECCTTCCHHHHHHHHHHHHC
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHHHC
Confidence 4556788999999999999999988764
No 227
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=93.82 E-value=0.037 Score=47.23 Aligned_cols=28 Identities=25% Similarity=0.462 Sum_probs=24.4
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|+||||||+..|.|..++.
T Consensus 35 ~~Ge~~~llGpnGsGKSTLLr~iaGl~~ 62 (372)
T 1v43_A 35 KDGEFLVLLGPSGCGKTTTLRMIAGLEE 62 (372)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCCCEEEEECCCCChHHHHHHHHHcCCC
Confidence 3668899999999999999999988765
No 228
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=93.82 E-value=0.075 Score=44.38 Aligned_cols=28 Identities=32% Similarity=0.375 Sum_probs=25.1
Q ss_pred CCCeEEEe--cCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIV--SGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~Iil--sGeSGsGKt~~~k~il~~l~ 122 (186)
...+.+++ .|++|.|||+.++.+.+.+.
T Consensus 48 ~~~~~~li~i~G~~G~GKT~L~~~~~~~~~ 77 (412)
T 1w5s_A 48 LSDVNMIYGSIGRVGIGKTTLAKFTVKRVS 77 (412)
T ss_dssp BCCEEEEEECTTCCSSSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcCCCCHHHHHHHHHHHHH
Confidence 57789999 99999999999999998765
No 229
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=93.80 E-value=0.033 Score=46.93 Aligned_cols=39 Identities=23% Similarity=0.088 Sum_probs=33.8
Q ss_pred HHHHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 84 AGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 84 a~~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...|...++.-.+.|.+.|.|.+|+|||+..+.|...+.
T Consensus 58 g~~ald~ll~i~~Gq~~gIiG~nGaGKTTLl~~I~g~~~ 96 (347)
T 2obl_A 58 GVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGAS 96 (347)
T ss_dssp SCHHHHHHSCEETTCEEEEEECTTSSHHHHHHHHHHHSC
T ss_pred CCEEEEeeeeecCCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 346777887778999999999999999999999999765
No 230
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=93.79 E-value=0.032 Score=45.91 Aligned_cols=28 Identities=29% Similarity=0.442 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 62 ~~Ge~~~i~G~NGsGKSTLlk~l~Gl~~ 89 (290)
T 2bbs_A 62 ERGQLLAVAGSTGAGKTSLLMMIMGELE 89 (290)
T ss_dssp CTTCEEEEEESTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCcHHHHHHHHhcCCC
Confidence 3678899999999999999999988764
No 231
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=93.79 E-value=0.052 Score=42.99 Aligned_cols=29 Identities=24% Similarity=0.440 Sum_probs=25.6
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+...|++.|.+|||||+.++.+.++|.
T Consensus 18 ~~~~~~i~~~G~~g~GKst~~~~l~~~l~ 46 (223)
T 3ld9_A 18 GPGSMFITFEGIDGSGKTTQSHLLAEYLS 46 (223)
T ss_dssp -CCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHh
Confidence 34667899999999999999999999987
No 232
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=93.78 E-value=0.035 Score=45.49 Aligned_cols=26 Identities=23% Similarity=0.445 Sum_probs=22.6
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...|+|.|++|+|||+.++.+.+.+.
T Consensus 45 ~~~vLl~G~~GtGKT~la~~la~~~~ 70 (350)
T 1g8p_A 45 IGGVLVFGDRGTGKSTAVRALAALLP 70 (350)
T ss_dssp GCCEEEECCGGGCTTHHHHHHHHHSC
T ss_pred CceEEEECCCCccHHHHHHHHHHhCc
Confidence 34599999999999999999998764
No 233
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=93.77 E-value=0.051 Score=45.24 Aligned_cols=27 Identities=22% Similarity=0.409 Sum_probs=24.7
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.|.+.|.+|+|||+++..+..++.
T Consensus 104 ~~~vI~ivG~~G~GKTT~~~~LA~~l~ 130 (320)
T 1zu4_A 104 RLNIFMLVGVNGTGKTTSLAKMANYYA 130 (320)
T ss_dssp SCEEEEEESSTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 466899999999999999999999988
No 234
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=93.76 E-value=0.035 Score=43.60 Aligned_cols=26 Identities=12% Similarity=0.222 Sum_probs=23.3
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..|++.|..|||||+.++.+.++|.
T Consensus 2 ~~~i~~~G~~g~GKtt~~~~l~~~l~ 27 (241)
T 2ocp_A 2 PRRLSIEGNIAVGKSTFVKLLTKTYP 27 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCT
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHHcC
Confidence 45799999999999999999999873
No 235
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=93.76 E-value=0.034 Score=42.68 Aligned_cols=25 Identities=24% Similarity=0.296 Sum_probs=21.7
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
+..|+|+|.+|||||+.++.+.+.+
T Consensus 3 ~~~i~i~G~~gsGkst~~~~l~~~~ 27 (219)
T 2h92_A 3 AINIALDGPAAAGKSTIAKRVASEL 27 (219)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHhc
Confidence 3569999999999999999988854
No 236
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=93.73 E-value=0.038 Score=41.17 Aligned_cols=25 Identities=20% Similarity=0.535 Sum_probs=21.0
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+|.|++|||||+..+.|.-.|.
T Consensus 27 g~~~i~G~NGsGKStll~ai~~~l~ 51 (182)
T 3kta_A 27 GFTAIVGANGSGKSNIGDAILFVLG 51 (182)
T ss_dssp SEEEEEECTTSSHHHHHHHHHHHTT
T ss_pred CcEEEECCCCCCHHHHHHHHHHHHc
Confidence 3789999999999999988776554
No 237
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=93.73 E-value=0.046 Score=42.12 Aligned_cols=28 Identities=21% Similarity=0.335 Sum_probs=23.3
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
....-.|.++|-+|||||+.++.+.+.+
T Consensus 9 ~~~~~iIgltG~~GSGKSTva~~L~~~l 36 (192)
T 2grj_A 9 HHHHMVIGVTGKIGTGKSTVCEILKNKY 36 (192)
T ss_dssp -CCEEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred cccceEEEEECCCCCCHHHHHHHHHHhc
Confidence 3455679999999999999999998864
No 238
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=93.72 E-value=0.036 Score=43.57 Aligned_cols=27 Identities=26% Similarity=0.351 Sum_probs=23.4
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
....|+|+|.||+|||+.+..+.+...
T Consensus 33 ~g~~ilI~GpsGsGKStLA~~La~~g~ 59 (205)
T 2qmh_A 33 YGLGVLITGDSGVGKSETALELVQRGH 59 (205)
T ss_dssp TTEEEEEECCCTTTTHHHHHHHHTTTC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhCC
Confidence 567899999999999999998888654
No 239
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=93.72 E-value=0.077 Score=41.47 Aligned_cols=36 Identities=17% Similarity=0.402 Sum_probs=24.7
Q ss_pred HHHhHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHHHH
Q psy18111 80 IFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVV 118 (186)
Q Consensus 80 i~~~a~~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il 118 (186)
++.+-+++...+. +++.+++.|++|||||+....++
T Consensus 62 ~~~~q~~~i~~i~---~g~~~~i~g~TGsGKTt~~~~~~ 97 (235)
T 3llm_A 62 VKKFESEILEAIS---QNSVVIIRGATGCGKTTQVPQFI 97 (235)
T ss_dssp GGGGHHHHHHHHH---HCSEEEEECCTTSSHHHHHHHHH
T ss_pred hHHHHHHHHHHHh---cCCEEEEEeCCCCCcHHhHHHHH
Confidence 3444555555543 34689999999999998665544
No 240
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=93.71 E-value=0.038 Score=47.09 Aligned_cols=27 Identities=30% Similarity=0.485 Sum_probs=24.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.+.|.|+||||||+..|.|..++.
T Consensus 28 ~Ge~~~llGpnGsGKSTLLr~iaGl~~ 54 (372)
T 1g29_1 28 DGEFMILLGPSGCGKTTTLRMIAGLEE 54 (372)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCcHHHHHHHHHHcCCC
Confidence 667899999999999999999988654
No 241
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=93.66 E-value=0.11 Score=42.94 Aligned_cols=30 Identities=7% Similarity=0.224 Sum_probs=26.4
Q ss_pred hhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 93 DRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 93 ~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+-+.+++|.|+.|.|||+.++.+.+.+.
T Consensus 20 ~~~~~~a~L~~G~~G~GKt~~a~~la~~l~ 49 (334)
T 1a5t_A 20 AGRGHHALLIQALPGMGDDALIYALSRYLL 49 (334)
T ss_dssp TTCCCSEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred cCCcceeEEEECCCCchHHHHHHHHHHHHh
Confidence 345577899999999999999999999886
No 242
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=93.66 E-value=0.031 Score=50.09 Aligned_cols=32 Identities=28% Similarity=0.545 Sum_probs=27.4
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHhhhcCC
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIACATPG 127 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~ 127 (186)
.+.+.+.+.|+||||||+..+.+..++. ..+|
T Consensus 367 ~~G~~~~ivG~sGsGKSTll~~l~g~~~-p~~G 398 (582)
T 3b5x_A 367 PQGKTVALVGRSGSGKSTIANLFTRFYD-VDSG 398 (582)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhcCCC-CCCC
Confidence 5778999999999999999999999876 4444
No 243
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=93.65 E-value=0.036 Score=47.60 Aligned_cols=28 Identities=29% Similarity=0.393 Sum_probs=24.7
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|+||||||+..|.|..++.
T Consensus 45 ~~Ge~~~llGpsGsGKSTLLr~iaGl~~ 72 (390)
T 3gd7_A 45 SPGQRVGLLGRTGSGKSTLLSAFLRLLN 72 (390)
T ss_dssp CTTCEEEEEESTTSSHHHHHHHHHTCSE
T ss_pred cCCCEEEEECCCCChHHHHHHHHhCCCC
Confidence 4678899999999999999999988654
No 244
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=93.65 E-value=0.039 Score=46.09 Aligned_cols=25 Identities=24% Similarity=0.431 Sum_probs=22.3
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
..+.++|.|+||+|||+.+..+++.
T Consensus 143 ~g~~vl~~G~sG~GKSt~a~~l~~~ 167 (314)
T 1ko7_A 143 YGVGVLITGDSGIGKSETALELIKR 167 (314)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHT
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHhc
Confidence 3679999999999999999998883
No 245
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=93.63 E-value=0.03 Score=47.36 Aligned_cols=28 Identities=21% Similarity=0.434 Sum_probs=24.4
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|+||||||+..|.|..++.
T Consensus 24 ~~Ge~~~llGpnGsGKSTLLr~iaGl~~ 51 (348)
T 3d31_A 24 ESGEYFVILGPTGAGKTLFLELIAGFHV 51 (348)
T ss_dssp CTTCEEEEECCCTHHHHHHHHHHHTSSC
T ss_pred cCCCEEEEECCCCccHHHHHHHHHcCCC
Confidence 3668899999999999999999988765
No 246
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=93.62 E-value=0.1 Score=42.95 Aligned_cols=26 Identities=15% Similarity=0.286 Sum_probs=23.8
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.++|.|++|+|||+.++.+.+.+.
T Consensus 152 ~~~lll~G~~GtGKT~La~aia~~~~ 177 (308)
T 2qgz_A 152 QKGLYLYGDMGIGKSYLLAAMAHELS 177 (308)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHH
Confidence 68899999999999999999988776
No 247
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=93.57 E-value=0.065 Score=44.03 Aligned_cols=33 Identities=30% Similarity=0.222 Sum_probs=27.0
Q ss_pred HHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 89 RWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 89 ~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+......+.+.+.|+||+|||+..+.+. .+.
T Consensus 157 ~~L~~~l~G~i~~l~G~sG~GKSTLln~l~-~~~ 189 (302)
T 2yv5_A 157 DELVDYLEGFICILAGPSGVGKSSILSRLT-GEE 189 (302)
T ss_dssp HHHHHHTTTCEEEEECSTTSSHHHHHHHHH-SCC
T ss_pred HHHHhhccCcEEEEECCCCCCHHHHHHHHH-Hhh
Confidence 445555678899999999999999999999 544
No 248
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=93.55 E-value=0.047 Score=44.51 Aligned_cols=28 Identities=18% Similarity=0.228 Sum_probs=24.0
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+..+++.|++|+|||..++.+.+.+-
T Consensus 34 ~~p~~lLl~GppGtGKT~la~aiA~~l~ 61 (293)
T 3t15_A 34 KVPLILGIWGGKGQGKSFQCELVFRKMG 61 (293)
T ss_dssp CCCSEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3556789999999999999999998764
No 249
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=93.49 E-value=0.14 Score=46.92 Aligned_cols=64 Identities=23% Similarity=0.198 Sum_probs=39.9
Q ss_pred CCCCCHHHHHHHhcCCCCCCCchHHHhHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 57 LNIYSAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 57 l~~y~~~~~~~y~~~~~~~~~PHi~~~a~~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.-|.......++.....++.-.- ... +.....+..+....++|.|++|+|||+.++.+.+.+.
T Consensus 169 l~~~~~~l~~~~~~~~~d~~iGr~-~~i-~~l~~~l~~~~~~~vlL~G~~GtGKT~la~~la~~l~ 232 (758)
T 1r6b_X 169 LENFTTNLNQLARVGGIDPLIGRE-KEL-ERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIV 232 (758)
T ss_dssp CCSSSCBHHHHHHTTCSCCCCSCH-HHH-HHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred HHHHhHhHHHHHhcCCCCCccCCH-HHH-HHHHHHHhccCCCCeEEEcCCCCCHHHHHHHHHHHHH
Confidence 444555555666554433322110 111 1223345556778899999999999999999999874
No 250
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=93.46 E-value=0.05 Score=43.40 Aligned_cols=27 Identities=30% Similarity=0.527 Sum_probs=24.7
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..-|++.|.+|||||+.++.+.++|.
T Consensus 26 ~~~~i~~eG~~GsGKsT~~~~l~~~l~ 52 (236)
T 3lv8_A 26 NAKFIVIEGLEGAGKSTAIQVVVETLQ 52 (236)
T ss_dssp CCCEEEEEESTTSCHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 456899999999999999999999986
No 251
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=93.46 E-value=0.043 Score=46.02 Aligned_cols=26 Identities=31% Similarity=0.473 Sum_probs=23.3
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
....|+|.|++|+|||+.++.+.+.+
T Consensus 71 ~~~~ill~Gp~GtGKT~la~~la~~l 96 (376)
T 1um8_A 71 SKSNILLIGPTGSGKTLMAQTLAKHL 96 (376)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHh
Confidence 45679999999999999999998876
No 252
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=93.45 E-value=0.049 Score=43.20 Aligned_cols=27 Identities=22% Similarity=0.288 Sum_probs=21.8
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..-|+|.|.+|||||+.++.+.++|.
T Consensus 24 ~g~~I~~eG~~GsGKsT~~~~l~~~l~ 50 (227)
T 3v9p_A 24 RGKFITFEGIDGAGKTTHLQWFCDRLQ 50 (227)
T ss_dssp CCCEEEEECCC---CHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 566899999999999999999999986
No 253
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=93.44 E-value=0.072 Score=44.45 Aligned_cols=26 Identities=31% Similarity=0.484 Sum_probs=22.9
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.+..|+|.|++|+|||+.++.+-+.+
T Consensus 50 ~~~~vll~GppGtGKT~la~~ia~~~ 75 (363)
T 3hws_A 50 GKSNILLIGPTGSGKTLLAETLARLL 75 (363)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHc
Confidence 45679999999999999999998865
No 254
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=93.42 E-value=0.079 Score=44.27 Aligned_cols=38 Identities=11% Similarity=0.153 Sum_probs=30.9
Q ss_pred HHHHHHHH-hhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 85 GSAYRWLR-DRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 85 ~~a~~~~~-~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+...+. ...+.+.+.|.|.+|||||+..+.+..++.
T Consensus 42 ~~~l~~i~~~~~~g~~v~i~G~~GaGKSTLl~~l~g~~~ 80 (337)
T 2qm8_A 42 RDLIDAVLPQTGRAIRVGITGVPGVGKSTTIDALGSLLT 80 (337)
T ss_dssp HHHHHHHGGGCCCSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHhCCcccCCCeEEEEECCCCCCHHHHHHHHHHhhh
Confidence 44555553 346788999999999999999999999876
No 255
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=93.41 E-value=0.061 Score=44.24 Aligned_cols=27 Identities=26% Similarity=0.320 Sum_probs=23.2
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+..|+|.|++|+|||..++.+.+.+.
T Consensus 50 ~~~~vLl~GppGtGKT~la~aia~~~~ 76 (322)
T 3eie_A 50 PTSGILLYGPPGTGKSYLAKAVATEAN 76 (322)
T ss_dssp CCCEEEEECSSSSCHHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHC
Confidence 356799999999999999999988654
No 256
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=93.38 E-value=0.052 Score=44.07 Aligned_cols=24 Identities=29% Similarity=0.296 Sum_probs=21.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
+...|+|+|.+|||||+.++.+.+
T Consensus 74 ~~~iI~I~G~~GSGKSTva~~La~ 97 (281)
T 2f6r_A 74 GLYVLGLTGISGSGKSSVAQRLKN 97 (281)
T ss_dssp TCEEEEEEECTTSCHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHH
Confidence 455799999999999999998875
No 257
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=93.37 E-value=0.037 Score=48.43 Aligned_cols=29 Identities=21% Similarity=0.348 Sum_probs=26.4
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
-.+.+.+.|.|.+|||||+.+|.+..++.
T Consensus 135 i~~Ge~v~IvGpnGsGKSTLlr~L~Gl~~ 163 (460)
T 2npi_A 135 NFEGPRVVIVGGSQTGKTSLSRTLCSYAL 163 (460)
T ss_dssp SSSCCCEEEEESTTSSHHHHHHHHHHTTH
T ss_pred eCCCCEEEEECCCCCCHHHHHHHHhCccc
Confidence 35788999999999999999999999886
No 258
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=93.32 E-value=0.055 Score=45.31 Aligned_cols=28 Identities=21% Similarity=0.312 Sum_probs=24.3
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+..|+|.|++|+|||+.++.+.+.+.
T Consensus 115 ~~~~~vLl~GppGtGKT~la~aia~~~~ 142 (357)
T 3d8b_A 115 GPPKGILLFGPPGTGKTLIGKCIASQSG 142 (357)
T ss_dssp SCCSEEEEESSTTSSHHHHHHHHHHHTT
T ss_pred CCCceEEEECCCCCCHHHHHHHHHHHcC
Confidence 4577899999999999999999988653
No 259
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=93.28 E-value=0.058 Score=41.74 Aligned_cols=27 Identities=26% Similarity=0.418 Sum_probs=23.4
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+.+++.|++|+|||+.+..++..++
T Consensus 22 ~G~~~~i~G~~GsGKTtl~~~~~~~~~ 48 (247)
T 2dr3_A 22 ERNVVLLSGGPGTGKTIFSQQFLWNGL 48 (247)
T ss_dssp TTCEEEEEECTTSSHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHH
Confidence 667899999999999999888877665
No 260
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A*
Probab=93.25 E-value=0.062 Score=47.67 Aligned_cols=27 Identities=19% Similarity=0.358 Sum_probs=24.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
....|++.|-+|||||+.++.+.++|-
T Consensus 34 ~~~lIvlvGlpGSGKSTia~~La~~L~ 60 (520)
T 2axn_A 34 SPTVIVMVGLPARGKTYISKKLTRYLN 60 (520)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHh
Confidence 456899999999999999999998874
No 261
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=93.23 E-value=0.03 Score=47.34 Aligned_cols=28 Identities=21% Similarity=0.279 Sum_probs=24.4
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|+||||||+..|.|..++.
T Consensus 29 ~~Ge~~~llGpnGsGKSTLLr~iaGl~~ 56 (353)
T 1oxx_K 29 ENGERFGILGPSGAGKTTFMRIIAGLDV 56 (353)
T ss_dssp CTTCEEEEECSCHHHHHHHHHHHHTSSC
T ss_pred CCCCEEEEECCCCCcHHHHHHHHhCCCC
Confidence 3668899999999999999999988654
No 262
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=93.21 E-value=0.046 Score=46.16 Aligned_cols=25 Identities=28% Similarity=0.325 Sum_probs=22.4
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..|+|+|.||||||+.++.+.+.+-
T Consensus 8 ~lI~I~GptgSGKTtla~~La~~l~ 32 (340)
T 3d3q_A 8 FLIVIVGPTASGKTELSIEVAKKFN 32 (340)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred ceEEEECCCcCcHHHHHHHHHHHcC
Confidence 4799999999999999999998764
No 263
>1knx_A Probable HPR(Ser) kinase/phosphatase; HPR kinase, HPR kinase/phosphatase, HPRK/P, P-loop, walker A BOX, catabolite repression; 2.50A {Mycoplasma pneumoniae} SCOP: c.98.2.1 c.91.1.2
Probab=93.20 E-value=0.043 Score=45.81 Aligned_cols=24 Identities=25% Similarity=0.421 Sum_probs=20.9
Q ss_pred CCeEEEecCCCCCchhHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
....|+|+|+||+|||+.+..+++
T Consensus 146 ~g~gvli~G~sG~GKStlal~l~~ 169 (312)
T 1knx_A 146 FGVGVLLTGRSGIGKSECALDLIN 169 (312)
T ss_dssp TTEEEEEEESSSSSHHHHHHHHHT
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHH
Confidence 567899999999999999877665
No 264
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=93.19 E-value=0.059 Score=42.21 Aligned_cols=26 Identities=35% Similarity=0.576 Sum_probs=23.9
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..-|+|.|.+|||||+.++.+.++|.
T Consensus 3 g~~i~~eG~~gsGKsT~~~~l~~~l~ 28 (213)
T 4tmk_A 3 SKYIVIEGLEGAGKTTARNVVVETLE 28 (213)
T ss_dssp CCEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 45799999999999999999999987
No 265
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=93.15 E-value=0.073 Score=47.36 Aligned_cols=29 Identities=21% Similarity=0.328 Sum_probs=25.4
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
......++|.|++|+|||+.++.+.+.+.
T Consensus 105 ~~~g~~vll~Gp~GtGKTtlar~ia~~l~ 133 (543)
T 3m6a_A 105 SLKGPILCLAGPPGVGKTSLAKSIAKSLG 133 (543)
T ss_dssp SCCSCEEEEESSSSSSHHHHHHHHHHHHT
T ss_pred cCCCCEEEEECCCCCCHHHHHHHHHHhcC
Confidence 34677899999999999999999998874
No 266
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=93.11 E-value=0.086 Score=46.41 Aligned_cols=27 Identities=30% Similarity=0.364 Sum_probs=23.7
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
....++|+|++|+|||+.++.+.+.+-
T Consensus 76 ~~~~lLL~GppGtGKTtla~~la~~l~ 102 (516)
T 1sxj_A 76 VFRAAMLYGPPGIGKTTAAHLVAQELG 102 (516)
T ss_dssp SCSEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHcC
Confidence 347999999999999999999988763
No 267
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=93.10 E-value=0.056 Score=44.38 Aligned_cols=28 Identities=29% Similarity=0.478 Sum_probs=23.8
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+..|+|.||+|+|||..++.+-+...
T Consensus 23 ~~~~~vLi~Ge~GtGKt~lAr~i~~~~~ 50 (304)
T 1ojl_A 23 PSDATVLIHGDSGTGKELVARALHACSA 50 (304)
T ss_dssp STTSCEEEESCTTSCHHHHHHHHHHHSS
T ss_pred CCCCcEEEECCCCchHHHHHHHHHHhCc
Confidence 4567899999999999999999888543
No 268
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=93.08 E-value=0.062 Score=43.15 Aligned_cols=27 Identities=22% Similarity=0.193 Sum_probs=24.3
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.++|.|++|+|||+.++.+...+.
T Consensus 29 ~G~i~~i~G~~GsGKTtl~~~l~~~~~ 55 (279)
T 1nlf_A 29 AGTVGALVSPGGAGKSMLALQLAAQIA 55 (279)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHh
Confidence 678899999999999999999998665
No 269
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=93.06 E-value=0.068 Score=42.04 Aligned_cols=27 Identities=19% Similarity=0.363 Sum_probs=24.6
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..-|++.|.+|||||+.++.+.++|.
T Consensus 4 ~g~~i~~eG~~g~GKst~~~~l~~~l~ 30 (216)
T 3tmk_A 4 RGKLILIEGLDRTGKTTQCNILYKKLQ 30 (216)
T ss_dssp CCCEEEEEECSSSSHHHHHHHHHHHHC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhc
Confidence 456799999999999999999999986
No 270
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=93.04 E-value=0.066 Score=44.27 Aligned_cols=26 Identities=27% Similarity=0.275 Sum_probs=23.3
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
....|+|.|++|+|||..++.+.+.+
T Consensus 44 ~~~~iLL~GppGtGKT~la~ala~~~ 69 (322)
T 1xwi_A 44 PWRGILLFGPPGTGKSYLAKAVATEA 69 (322)
T ss_dssp CCSEEEEESSSSSCHHHHHHHHHHHT
T ss_pred CCceEEEECCCCccHHHHHHHHHHHc
Confidence 34689999999999999999999876
No 271
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=93.02 E-value=0.1 Score=47.59 Aligned_cols=26 Identities=23% Similarity=0.417 Sum_probs=23.8
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
+...|+|+|.+|||||+.++.+-+.|
T Consensus 51 ~g~lIvLtGlsGSGKSTlAr~La~~L 76 (630)
T 1x6v_B 51 RGCTVWLTGLSGAGKTTVSMALEEYL 76 (630)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHH
Confidence 55689999999999999999999987
No 272
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=93.02 E-value=0.052 Score=43.92 Aligned_cols=26 Identities=27% Similarity=0.351 Sum_probs=22.1
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..++|.|++|+|||+.++.+...+.
T Consensus 44 ~~GvlL~Gp~GtGKTtLakala~~~~ 69 (274)
T 2x8a_A 44 PAGVLLAGPPGCGKTLLAKAVANESG 69 (274)
T ss_dssp CSEEEEESSTTSCHHHHHHHHHHHTT
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHcC
Confidence 34599999999999999999988643
No 273
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=93.01 E-value=0.067 Score=47.19 Aligned_cols=25 Identities=24% Similarity=0.344 Sum_probs=23.3
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.|.|++|||||+..+.+...+.
T Consensus 30 e~~~liG~nGsGKSTLl~~l~Gl~~ 54 (483)
T 3euj_A 30 LVTTLSGGNGAGKSTTMAGFVTALI 54 (483)
T ss_dssp SEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred ceEEEECCCCCcHHHHHHHHhcCCC
Confidence 7899999999999999999998776
No 274
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=92.87 E-value=0.035 Score=49.74 Aligned_cols=28 Identities=32% Similarity=0.570 Sum_probs=25.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.+.|+||||||+..+.+..++.
T Consensus 367 ~~G~~~~ivG~sGsGKSTLl~~l~g~~~ 394 (582)
T 3b60_A 367 PAGKTVALVGRSGSGKSTIASLITRFYD 394 (582)
T ss_dssp CTTCEEEEEECTTSSHHHHHHHHTTTTC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhhccC
Confidence 4778999999999999999999998765
No 275
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=92.78 E-value=0.12 Score=45.06 Aligned_cols=32 Identities=28% Similarity=0.333 Sum_probs=26.9
Q ss_pred HHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 91 LRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 91 ~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
++..+....++|.|++|+|||..++.+.+.+.
T Consensus 195 ~l~r~~~~~~LL~G~pG~GKT~la~~la~~l~ 226 (468)
T 3pxg_A 195 VLSRRTKNNPVLIGEPGVGKTAIAEGLAQQII 226 (468)
T ss_dssp HHHCSSSCEEEEESCTTTTTHHHHHHHHHHHH
T ss_pred HHhccCCCCeEEECCCCCCHHHHHHHHHHHHH
Confidence 34445666899999999999999999999875
No 276
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=92.76 E-value=0.036 Score=49.88 Aligned_cols=28 Identities=29% Similarity=0.501 Sum_probs=25.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.+.+.|+||||||+..+.+..++.
T Consensus 379 ~~G~~~~ivG~sGsGKSTll~~l~g~~~ 406 (598)
T 3qf4_B 379 KPGQKVALVGPTGSGKTTIVNLLMRFYD 406 (598)
T ss_dssp CTTCEEEEECCTTSSTTHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCcHHHHHHHHhcCcC
Confidence 4678999999999999999999998765
No 277
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Probab=92.75 E-value=0.079 Score=46.09 Aligned_cols=28 Identities=18% Similarity=0.300 Sum_probs=24.1
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.....|++.|.+|||||+.++.+.+++.
T Consensus 37 ~~~~~IvlvGlpGsGKSTia~~La~~l~ 64 (469)
T 1bif_A 37 NCPTLIVMVGLPARGKTYISKKLTRYLN 64 (469)
T ss_dssp -CCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHHh
Confidence 3556899999999999999999998764
No 278
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=92.75 E-value=0.067 Score=44.81 Aligned_cols=26 Identities=23% Similarity=0.340 Sum_probs=22.8
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..|+|+|.+|||||+.++.+.+.+-
T Consensus 5 ~~~i~i~GptGsGKTtla~~La~~l~ 30 (323)
T 3crm_A 5 PPAIFLMGPTAAGKTDLAMALADALP 30 (323)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHcC
Confidence 35799999999999999999998763
No 279
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=92.67 E-value=0.036 Score=49.76 Aligned_cols=28 Identities=25% Similarity=0.423 Sum_probs=25.0
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.+.|+||||||+..+.+..++.
T Consensus 368 ~~G~~~~ivG~sGsGKSTLl~~l~g~~~ 395 (595)
T 2yl4_A 368 PSGSVTALVGPSGSGKSTVLSLLLRLYD 395 (595)
T ss_dssp CTTCEEEEECCTTSSSTHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhcCcC
Confidence 4678999999999999999999998765
No 280
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=92.63 E-value=0.076 Score=44.50 Aligned_cols=26 Identities=27% Similarity=0.339 Sum_probs=23.0
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..|+|.|++|+|||..++.+.+.+.
T Consensus 84 ~~~iLL~GppGtGKT~la~ala~~~~ 109 (355)
T 2qp9_X 84 TSGILLYGPPGTGKSYLAKAVATEAN 109 (355)
T ss_dssp CCCEEEECSTTSCHHHHHHHHHHHHT
T ss_pred CceEEEECCCCCcHHHHHHHHHHHhC
Confidence 45799999999999999999998764
No 281
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=92.58 E-value=0.07 Score=40.19 Aligned_cols=22 Identities=27% Similarity=0.392 Sum_probs=19.5
Q ss_pred EEEecCCCCCchhHHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~ 120 (186)
.|++.|.+|+|||+..+.+...
T Consensus 7 kv~lvG~~g~GKSTLl~~l~~~ 28 (199)
T 2f9l_A 7 KVVLIGDSGVGKSNLLSRFTRN 28 (199)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHhcC
Confidence 4889999999999999888764
No 282
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=92.55 E-value=0.22 Score=43.07 Aligned_cols=25 Identities=16% Similarity=0.464 Sum_probs=23.6
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+++.|..|+|||+.++.++.+|.
T Consensus 46 ~~~li~G~aGTGKT~ll~~~~~~l~ 70 (459)
T 3upu_A 46 HHVTINGPAGTGATTLTKFIIEALI 70 (459)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4899999999999999999999998
No 283
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=92.51 E-value=0.074 Score=44.55 Aligned_cols=26 Identities=19% Similarity=0.413 Sum_probs=22.6
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...|+|+|.||||||+.+..+.+.+.
T Consensus 3 ~~~i~i~GptgsGKt~la~~La~~~~ 28 (322)
T 3exa_A 3 EKLVAIVGPTAVGKTKTSVMLAKRLN 28 (322)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHTTT
T ss_pred CcEEEEECCCcCCHHHHHHHHHHhCc
Confidence 34689999999999999999988664
No 284
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=92.50 E-value=0.072 Score=47.44 Aligned_cols=27 Identities=22% Similarity=0.399 Sum_probs=24.1
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+.+.|.|++|||||+..|.+...+.
T Consensus 46 ~Ge~~~LvG~NGaGKSTLlk~l~Gl~~ 72 (538)
T 1yqt_A 46 EGMVVGIVGPNGTGKSTAVKILAGQLI 72 (538)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 668899999999999999999988665
No 285
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=92.45 E-value=0.098 Score=42.87 Aligned_cols=27 Identities=26% Similarity=0.437 Sum_probs=24.7
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.|.+.|.+|+|||++++.+..++.
T Consensus 97 ~~~~i~i~g~~G~GKTT~~~~la~~~~ 123 (295)
T 1ls1_A 97 DRNLWFLVGLQGSGKTTTAAKLALYYK 123 (295)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999988
No 286
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=92.39 E-value=0.2 Score=43.52 Aligned_cols=27 Identities=37% Similarity=0.540 Sum_probs=24.6
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+..|++.|.+|+|||+++..+..++.
T Consensus 96 ~~~vI~lvG~~GsGKTTt~~kLA~~l~ 122 (433)
T 3kl4_A 96 LPFIIMLVGVQGSGKTTTAGKLAYFYK 122 (433)
T ss_dssp SSEEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999988
No 287
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=92.37 E-value=0.072 Score=40.05 Aligned_cols=23 Identities=26% Similarity=0.336 Sum_probs=20.0
Q ss_pred EEEecCCCCCchhHHHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l 121 (186)
.|++.|.+|+|||+..+.+....
T Consensus 31 kv~lvG~~g~GKSTLl~~l~~~~ 53 (191)
T 1oix_A 31 KVVLIGDSGVGKSNLLSRFTRNE 53 (191)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHhcCC
Confidence 58999999999999999887743
No 288
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=92.28 E-value=0.036 Score=49.77 Aligned_cols=28 Identities=29% Similarity=0.487 Sum_probs=25.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.+.+.|+||||||+..+.+..++.
T Consensus 367 ~~Ge~~~ivG~sGsGKSTll~~l~g~~~ 394 (587)
T 3qf4_A 367 KPGSLVAVLGETGSGKSTLMNLIPRLID 394 (587)
T ss_dssp CTTCEEEEECSSSSSHHHHHHTTTTSSC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCCcc
Confidence 4778999999999999999999998765
No 289
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=92.19 E-value=0.031 Score=50.06 Aligned_cols=28 Identities=21% Similarity=0.434 Sum_probs=25.1
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.+.|+||||||+..+.+..++.
T Consensus 365 ~~G~~~~ivG~sGsGKSTll~~l~g~~~ 392 (578)
T 4a82_A 365 EKGETVAFVGMSGGGKSTLINLIPRFYD 392 (578)
T ss_dssp CTTCEEEEECSTTSSHHHHHTTTTTSSC
T ss_pred CCCCEEEEECCCCChHHHHHHHHhcCCC
Confidence 4778999999999999999999988765
No 290
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=92.17 E-value=0.071 Score=44.98 Aligned_cols=28 Identities=14% Similarity=0.418 Sum_probs=24.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+....|+|+|.+|+|||+.+..+.+.+-
T Consensus 38 ~~~~lIvI~GPTgsGKTtLa~~LA~~l~ 65 (339)
T 3a8t_A 38 RKEKLLVLMGATGTGKSRLSIDLAAHFP 65 (339)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHTTSC
T ss_pred cCCceEEEECCCCCCHHHHHHHHHHHCC
Confidence 3456899999999999999999998764
No 291
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=92.16 E-value=0.098 Score=42.84 Aligned_cols=31 Identities=16% Similarity=0.210 Sum_probs=24.9
Q ss_pred HhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 92 RDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 92 ~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
......+.+.+.|+||+|||+..+.+...+.
T Consensus 164 f~~l~geiv~l~G~sG~GKSTll~~l~g~~~ 194 (301)
T 1u0l_A 164 KEYLKGKISTMAGLSGVGKSSLLNAINPGLK 194 (301)
T ss_dssp HHHHSSSEEEEECSTTSSHHHHHHHHSTTCC
T ss_pred HHHhcCCeEEEECCCCCcHHHHHHHhccccc
Confidence 3334678899999999999999988877554
No 292
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=91.99 E-value=0.1 Score=43.98 Aligned_cols=27 Identities=19% Similarity=0.255 Sum_probs=23.2
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+..+++.|.+|||||+.++.++..+.
T Consensus 34 ~~~~~~i~G~~G~GKs~~~~~~~~~~~ 60 (392)
T 4ag6_A 34 TNSNWTILAKPGAGKSFTAKMLLLREY 60 (392)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHHH
T ss_pred ccCceEEEcCCCCCHHHHHHHHHHHHH
Confidence 455678999999999999999998766
No 293
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=91.97 E-value=0.095 Score=37.58 Aligned_cols=21 Identities=19% Similarity=0.286 Sum_probs=18.7
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 7 ~i~v~G~~~~GKssl~~~l~~ 27 (168)
T 1z2a_A 7 KMVVVGNGAVGKSSMIQRYCK 27 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 589999999999999888775
No 294
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A
Probab=91.95 E-value=0.18 Score=43.68 Aligned_cols=44 Identities=14% Similarity=0.059 Sum_probs=39.4
Q ss_pred hHHHhHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 79 HIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 79 Hi~~~a~~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
......-+|...+..-.+.|.+.|.|.+|+|||+.++.|.+++.
T Consensus 156 ~~~~tGiraID~~~pi~rGQr~~IvG~sG~GKTtLl~~Iar~i~ 199 (422)
T 3ice_A 156 STEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIA 199 (422)
T ss_dssp CTTHHHHHHHHHHSCCBTTCEEEEECCSSSSHHHHHHHHHHHHH
T ss_pred CcccccceeeeeeeeecCCcEEEEecCCCCChhHHHHHHHHHHh
Confidence 46677888888888889999999999999999999999999876
No 295
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=91.89 E-value=0.11 Score=43.76 Aligned_cols=27 Identities=26% Similarity=0.304 Sum_probs=23.4
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
....|+|.|++|+|||..++.+.+.+-
T Consensus 147 ~~~~vLL~GppGtGKT~la~aia~~~~ 173 (389)
T 3vfd_A 147 PARGLLLFGPPGNGKTMLAKAVAAESN 173 (389)
T ss_dssp CCSEEEEESSTTSCHHHHHHHHHHHTT
T ss_pred CCceEEEECCCCCCHHHHHHHHHHhhc
Confidence 457899999999999999999977643
No 296
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=91.89 E-value=0.093 Score=46.78 Aligned_cols=28 Identities=25% Similarity=0.323 Sum_probs=24.7
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 23 ~~Gei~gLiGpNGaGKSTLlkiL~Gl~~ 50 (538)
T 3ozx_A 23 KNNTILGVLGKNGVGKTTVLKILAGEII 50 (538)
T ss_dssp CTTEEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCCEEEEECCCCCcHHHHHHHHhcCCC
Confidence 3678899999999999999999988665
No 297
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=91.89 E-value=0.043 Score=43.71 Aligned_cols=28 Identities=14% Similarity=0.256 Sum_probs=24.0
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+...|+|.|-.|||||+.++.+.++|.
T Consensus 22 ~~~~~I~ieG~~GsGKST~~~~L~~~l~ 49 (263)
T 1p5z_B 22 TRIKKISIEGNIAAGKSTFVNILKQLCE 49 (263)
T ss_dssp -CCEEEEEECSTTSSHHHHHTTTGGGCT
T ss_pred cCceEEEEECCCCCCHHHHHHHHHHhcC
Confidence 3567899999999999999999988873
No 298
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=91.85 E-value=0.088 Score=40.61 Aligned_cols=25 Identities=24% Similarity=0.205 Sum_probs=22.3
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
-.|.|+|+.|||||+.++.+-+.|-
T Consensus 7 ~iI~i~g~~GsGk~ti~~~la~~lg 31 (201)
T 3fdi_A 7 IIIAIGREFGSGGHLVAKKLAEHYN 31 (201)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHTT
T ss_pred eEEEEeCCCCCCHHHHHHHHHHHhC
Confidence 4799999999999999999988655
No 299
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=91.84 E-value=0.24 Score=43.19 Aligned_cols=27 Identities=22% Similarity=0.460 Sum_probs=24.8
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+..|++.|.+|+|||+++..+..++.
T Consensus 99 ~p~vIlivG~~G~GKTTt~~kLA~~l~ 125 (443)
T 3dm5_A 99 KPTILLMVGIQGSGKTTTVAKLARYFQ 125 (443)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECcCCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999988
No 300
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=91.80 E-value=0.083 Score=46.63 Aligned_cols=31 Identities=26% Similarity=0.342 Sum_probs=24.6
Q ss_pred HHHHHHh--hCCCeEEEecCCCCCchhHHHHHH
Q psy18111 87 AYRWLRD--RSEDQCIIVSGESGSGKTQAASMV 117 (186)
Q Consensus 87 a~~~~~~--~~~~Q~IilsGeSGsGKt~~~k~i 117 (186)
++..+.. -.+.+.+.|.|++|||||+.++.+
T Consensus 27 ~Ld~i~~G~i~~Ge~~~l~G~nGsGKSTL~~~~ 59 (525)
T 1tf7_A 27 GFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQF 59 (525)
T ss_dssp THHHHTTSSEETTSEEEEEESTTSSHHHHHHHH
T ss_pred hHHHhcCCCCCCCeEEEEEcCCCCCHHHHHHHH
Confidence 3444443 257889999999999999999996
No 301
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=91.68 E-value=0.073 Score=48.22 Aligned_cols=28 Identities=21% Similarity=0.249 Sum_probs=25.1
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 101 ~~Gei~~LvGpNGaGKSTLLkiL~Gll~ 128 (608)
T 3j16_B 101 RPGQVLGLVGTNGIGKSTALKILAGKQK 128 (608)
T ss_dssp CTTSEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCCCEEEEECCCCChHHHHHHHHhcCCC
Confidence 4788999999999999999999988765
No 302
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=91.64 E-value=0.13 Score=43.67 Aligned_cols=27 Identities=22% Similarity=0.332 Sum_probs=23.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
...+.+.|.|.||+|||+..+.++..+
T Consensus 213 ~~G~~~~lvG~sG~GKSTLln~L~g~~ 239 (358)
T 2rcn_A 213 LTGRISIFAGQSGVGKSSLLNALLGLQ 239 (358)
T ss_dssp HTTSEEEEECCTTSSHHHHHHHHHCCS
T ss_pred cCCCEEEEECCCCccHHHHHHHHhccc
Confidence 367899999999999999998888643
No 303
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=91.64 E-value=0.11 Score=37.06 Aligned_cols=21 Identities=14% Similarity=0.335 Sum_probs=18.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.+..
T Consensus 3 ki~v~G~~~~GKSsli~~l~~ 23 (161)
T 2dyk_A 3 KVVIVGRPNVGKSSLFNRLLK 23 (161)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 489999999999999888775
No 304
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=91.63 E-value=0.078 Score=47.67 Aligned_cols=27 Identities=19% Similarity=0.497 Sum_probs=23.9
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+.++|.|++|+|||+.++.+.+.+.
T Consensus 59 ~g~~vll~Gp~GtGKTtlar~ia~~l~ 85 (604)
T 3k1j_A 59 QKRHVLLIGEPGTGKSMLGQAMAELLP 85 (604)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHHHTSC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHhccCC
Confidence 346899999999999999999999764
No 305
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=91.63 E-value=0.18 Score=40.78 Aligned_cols=23 Identities=13% Similarity=0.099 Sum_probs=21.2
Q ss_pred eEEEecCCCCCchhHHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
+.+++.|+.|.|||+.++.+.+.
T Consensus 32 ~~v~i~G~~G~GKT~Ll~~~~~~ 54 (350)
T 2qen_A 32 PLTLLLGIRRVGKSSLLRAFLNE 54 (350)
T ss_dssp SEEEEECCTTSSHHHHHHHHHHH
T ss_pred CeEEEECCCcCCHHHHHHHHHHH
Confidence 79999999999999999988874
No 306
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=91.62 E-value=0.19 Score=40.68 Aligned_cols=24 Identities=17% Similarity=0.225 Sum_probs=22.0
Q ss_pred eEEEecCCCCCchhHHHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
+.+++.|+.|.|||+.++.+.+.+
T Consensus 31 ~~v~i~G~~G~GKT~L~~~~~~~~ 54 (357)
T 2fna_A 31 PITLVLGLRRTGKSSIIKIGINEL 54 (357)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHhc
Confidence 799999999999999999998864
No 307
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=91.57 E-value=0.1 Score=43.73 Aligned_cols=27 Identities=37% Similarity=0.422 Sum_probs=24.0
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
...+.+.|.|++|||||+.++.+....
T Consensus 129 ~~G~i~~I~G~~GsGKTTL~~~l~~~~ 155 (349)
T 1pzn_A 129 ETQAITEVFGEFGSGKTQLAHTLAVMV 155 (349)
T ss_dssp ESSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 377889999999999999999998865
No 308
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=91.56 E-value=0.096 Score=45.28 Aligned_cols=25 Identities=24% Similarity=0.469 Sum_probs=22.2
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..|+|+|.||+|||+.+..+.+.+.
T Consensus 3 ~~i~i~GptgsGKttla~~La~~~~ 27 (409)
T 3eph_A 3 KVIVIAGTTGVGKSQLSIQLAQKFN 27 (409)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHHT
T ss_pred cEEEEECcchhhHHHHHHHHHHHCC
Confidence 3689999999999999999998765
No 309
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=91.48 E-value=0.11 Score=45.25 Aligned_cols=28 Identities=29% Similarity=0.458 Sum_probs=23.1
Q ss_pred hCCCeE--EEecCCCCCchhHHHHHHHHHH
Q psy18111 94 RSEDQC--IIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 94 ~~~~Q~--IilsGeSGsGKt~~~k~il~~l 121 (186)
-...+. +.|.|++|||||+..+.++...
T Consensus 37 i~~Gei~~vaLvG~nGaGKSTLln~L~G~~ 66 (427)
T 2qag_B 37 VSQGFCFNILCVGETGLGKSTLMDTLFNTK 66 (427)
T ss_dssp CC-CCEEEEEEECSTTSSSHHHHHHHHTSC
T ss_pred ecCCCeeEEEEECCCCCCHHHHHHHHhCcc
Confidence 356677 8999999999999999988764
No 310
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=91.36 E-value=0.12 Score=36.83 Aligned_cols=21 Identities=29% Similarity=0.550 Sum_probs=18.3
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 6 ~i~v~G~~~~GKssl~~~l~~ 26 (168)
T 1u8z_A 6 KVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 589999999999999877765
No 311
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=91.35 E-value=0.089 Score=39.08 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=18.6
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.+..
T Consensus 4 kv~ivG~~gvGKStLl~~l~~ 24 (184)
T 2zej_A 4 KLMIVGNTGSGKTTLLQQLMK 24 (184)
T ss_dssp EEEEESCTTSSHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 489999999999999888765
No 312
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=91.34 E-value=0.11 Score=37.01 Aligned_cols=21 Identities=24% Similarity=0.461 Sum_probs=18.4
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 5 ~i~v~G~~~~GKssl~~~l~~ 25 (166)
T 2ce2_X 5 KLVVVGAGGVGKSALTIQLIQ 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 489999999999999877765
No 313
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=91.33 E-value=0.2 Score=46.03 Aligned_cols=32 Identities=28% Similarity=0.333 Sum_probs=26.8
Q ss_pred HHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 91 LRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 91 ~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
++..+....++|.|++|+|||..++.+.+.+.
T Consensus 195 ~l~~~~~~~vLL~G~pGtGKT~la~~la~~l~ 226 (758)
T 3pxi_A 195 VLSRRTKNNPVLIGEPGVGKTAIAEGLAQQII 226 (758)
T ss_dssp HHHCSSSCEEEEESCTTTTTHHHHHHHHHHHH
T ss_pred HHhCCCCCCeEEECCCCCCHHHHHHHHHHHHh
Confidence 34445666799999999999999999999874
No 314
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=91.33 E-value=0.15 Score=44.23 Aligned_cols=27 Identities=26% Similarity=0.437 Sum_probs=24.7
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.++.|++.|.+|+|||+++..+..++.
T Consensus 97 ~~~vi~i~G~~GsGKTT~~~~LA~~l~ 123 (425)
T 2ffh_A 97 DRNLWFLVGLQGSGKTTTAAKLALYYK 123 (425)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999988
No 315
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=91.23 E-value=0.14 Score=39.42 Aligned_cols=23 Identities=26% Similarity=0.556 Sum_probs=21.9
Q ss_pred EEecCCCCCchhHHHHHHHHHHh
Q psy18111 100 IIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 100 IilsGeSGsGKt~~~k~il~~l~ 122 (186)
|+|-|.-|||||+-++.+.++|.
T Consensus 3 I~~EG~DGsGKsTq~~~L~~~L~ 25 (197)
T 3hjn_A 3 ITFEGIDGSGKSTQIQLLAQYLE 25 (197)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 88999999999999999999997
No 316
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=91.21 E-value=0.071 Score=40.23 Aligned_cols=27 Identities=19% Similarity=0.230 Sum_probs=21.8
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.....|++.|.+|+|||+..+.+....
T Consensus 24 ~~~~~v~lvG~~g~GKSTLl~~l~g~~ 50 (210)
T 1pui_A 24 DTGIEVAFAGRSNAGKSSALNTLTNQK 50 (210)
T ss_dssp SCSEEEEEEECTTSSHHHHHTTTCCC-
T ss_pred CCCcEEEEECCCCCCHHHHHHHHhCCC
Confidence 456779999999999999988876543
No 317
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=91.20 E-value=0.059 Score=52.90 Aligned_cols=32 Identities=25% Similarity=0.455 Sum_probs=27.3
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHhhhcCC
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIACATPG 127 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~~~~~~ 127 (186)
...|.|-|.|+||||||+..+.+++++- ..+|
T Consensus 1103 ~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-p~~G 1134 (1321)
T 4f4c_A 1103 EPGQTLALVGPSGCGKSTVVALLERFYD-TLGG 1134 (1321)
T ss_dssp CTTCEEEEECSTTSSTTSHHHHHTTSSC-CSSS
T ss_pred CCCCEEEEECCCCChHHHHHHHHhcCcc-CCCC
Confidence 4678999999999999999999999876 4444
No 318
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=91.16 E-value=0.13 Score=37.98 Aligned_cols=25 Identities=12% Similarity=0.268 Sum_probs=20.7
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
+...|++.|.+|+|||+..+.+...
T Consensus 3 ~~~ki~ivG~~g~GKStLl~~l~~~ 27 (172)
T 2gj8_A 3 HGMKVVIAGRPNAGKSSLLNALAGR 27 (172)
T ss_dssp -CEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCC
Confidence 4567999999999999998888753
No 319
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=91.14 E-value=0.13 Score=40.64 Aligned_cols=36 Identities=19% Similarity=0.450 Sum_probs=27.2
Q ss_pred HHHHHHhhC-CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 87 AYRWLRDRS-EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 87 a~~~~~~~~-~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
++..+...- +.-+|++.|..|+|||+.+..+.+++.
T Consensus 47 ~l~~~~~~iPkkn~ili~GPPGtGKTt~a~ala~~l~ 83 (212)
T 1tue_A 47 ALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQ 83 (212)
T ss_dssp HHHHHHHTCTTCSEEEEESCGGGCHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCcccEEEEECCCCCCHHHHHHHHHHHhC
Confidence 344444431 224799999999999999999999875
No 320
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=91.12 E-value=0.13 Score=36.79 Aligned_cols=21 Identities=24% Similarity=0.354 Sum_probs=18.4
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 5 ~i~v~G~~~~GKssli~~l~~ 25 (170)
T 1ek0_A 5 KLVLLGEAAVGKSSIVLRFVS 25 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 489999999999999887765
No 321
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=91.11 E-value=0.066 Score=47.75 Aligned_cols=28 Identities=36% Similarity=0.398 Sum_probs=24.5
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 292 ~~Gei~~i~G~nGsGKSTLl~~l~Gl~~ 319 (538)
T 3ozx_A 292 KEGEIIGILGPNGIGKTTFARILVGEIT 319 (538)
T ss_dssp ETTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 3577899999999999999999988765
No 322
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=91.04 E-value=0.13 Score=37.53 Aligned_cols=21 Identities=19% Similarity=0.219 Sum_probs=18.6
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.+..
T Consensus 5 ~v~lvG~~gvGKStL~~~l~~ 25 (165)
T 2wji_A 5 EIALIGNPNVGKSTIFNALTG 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999888765
No 323
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=91.02 E-value=0.14 Score=36.52 Aligned_cols=21 Identities=29% Similarity=0.439 Sum_probs=18.2
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 5 ~i~v~G~~~~GKSsli~~l~~ 25 (167)
T 1kao_A 5 KVVVLGSGGVGKSALTVQFVT 25 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 589999999999999777664
No 324
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=91.00 E-value=0.13 Score=37.27 Aligned_cols=22 Identities=36% Similarity=0.462 Sum_probs=19.1
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
=.|++.|.+|+|||+..+.++.
T Consensus 9 ~~i~v~G~~~~GKSsli~~l~~ 30 (182)
T 1ky3_A 9 LKVIILGDSGVGKTSLMHRYVN 30 (182)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHh
Confidence 3689999999999999887765
No 325
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=90.98 E-value=0.14 Score=45.10 Aligned_cols=27 Identities=30% Similarity=0.356 Sum_probs=23.3
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
..+..|+|.|++|+|||..++.+.+.+
T Consensus 236 ~~~~~vLL~GppGtGKT~lAraia~~~ 262 (489)
T 3hu3_A 236 KPPRGILLYGPPGTGKTLIARAVANET 262 (489)
T ss_dssp CCCCEEEEECSTTSSHHHHHHHHHHHC
T ss_pred CCCCcEEEECcCCCCHHHHHHHHHHHh
Confidence 566789999999999999999987753
No 326
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=90.98 E-value=0.14 Score=36.63 Aligned_cols=21 Identities=29% Similarity=0.438 Sum_probs=18.4
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 5 ki~v~G~~~~GKssli~~l~~ 25 (167)
T 1c1y_A 5 KLVVLGSGGVGKSALTVQFVQ 25 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 489999999999999887765
No 327
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=90.97 E-value=0.13 Score=38.52 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=19.3
Q ss_pred CCeEEEecCCCCCchhHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
+.=.|++.|.+|+|||+..+.+..
T Consensus 22 ~~~ki~~vG~~~vGKSsli~~l~~ 45 (190)
T 1m2o_B 22 KHGKLLFLGLDNAGKTTLLHMLKN 45 (190)
T ss_dssp --CEEEEEESTTSSHHHHHHHHHH
T ss_pred CccEEEEECCCCCCHHHHHHHHhc
Confidence 334699999999999999887765
No 328
>3ch4_B Pmkase, phosphomevalonate kinase; parallel beta-sheet with the strand order 23145, walker A motif, cholesterol biosynthesis, lipid synthesis; 1.76A {Homo sapiens}
Probab=90.90 E-value=0.13 Score=40.21 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=20.7
Q ss_pred EEEecCCCCCchhHHHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l 121 (186)
.|+++|.+||||++.++.+.+.+
T Consensus 13 II~itGk~~SGKd~va~~l~~~~ 35 (202)
T 3ch4_B 13 VLLFSGKRKSGKDFVTEALQSRL 35 (202)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCChHHHHHHHHHHc
Confidence 58889999999999999998854
No 329
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=90.83 E-value=0.14 Score=36.65 Aligned_cols=21 Identities=24% Similarity=0.336 Sum_probs=18.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 8 ~i~v~G~~~~GKSsli~~l~~ 28 (170)
T 1z0j_A 8 KVCLLGDTGVGKSSIMWRFVE 28 (170)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 489999999999999888765
No 330
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=90.82 E-value=0.14 Score=40.28 Aligned_cols=26 Identities=19% Similarity=0.220 Sum_probs=22.9
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.-.|.|+|++|||||+.++.+-+.|-
T Consensus 14 ~~iI~i~g~~gsGk~~i~~~la~~lg 39 (223)
T 3hdt_A 14 NLIITIEREYGSGGRIVGKKLAEELG 39 (223)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred CeEEEEeCCCCCCHHHHHHHHHHHcC
Confidence 45799999999999999999988665
No 331
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=90.82 E-value=0.38 Score=41.55 Aligned_cols=26 Identities=23% Similarity=0.474 Sum_probs=23.4
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..++|.|++|+|||..++.+.+.+-
T Consensus 63 ~~~iLl~GppGtGKT~la~ala~~l~ 88 (456)
T 2c9o_A 63 GRAVLLAGPPGTGKTALALAIAQELG 88 (456)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred CCeEEEECCCcCCHHHHHHHHHHHhC
Confidence 46899999999999999999999864
No 332
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=90.80 E-value=0.15 Score=36.71 Aligned_cols=21 Identities=24% Similarity=0.232 Sum_probs=18.3
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 8 ~i~v~G~~~~GKssli~~l~~ 28 (170)
T 1z08_A 8 KVVLLGEGCVGKTSLVLRYCE 28 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 589999999999999877764
No 333
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=90.79 E-value=0.18 Score=41.43 Aligned_cols=26 Identities=35% Similarity=0.613 Sum_probs=24.1
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.|+++|.+|+|||+++..+..++.
T Consensus 98 ~~vi~i~G~~G~GKTT~~~~la~~~~ 123 (297)
T 1j8m_F 98 PYVIMLVGVQGTGKTTTAGKLAYFYK 123 (297)
T ss_dssp SEEEEEECSSCSSTTHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 67899999999999999999999887
No 334
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=90.79 E-value=0.13 Score=37.78 Aligned_cols=21 Identities=19% Similarity=0.219 Sum_probs=18.9
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.+..
T Consensus 9 ~i~lvG~~gvGKStL~~~l~~ 29 (188)
T 2wjg_A 9 EIALIGNPNVGKSTIFNALTG 29 (188)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999888875
No 335
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=90.71 E-value=0.14 Score=47.78 Aligned_cols=27 Identities=30% Similarity=0.356 Sum_probs=23.5
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
..+..|+|.|++|+|||+.++.+...+
T Consensus 236 ~~~~~vLL~Gp~GtGKTtLarala~~l 262 (806)
T 1ypw_A 236 KPPRGILLYGPPGTGKTLIARAVANET 262 (806)
T ss_dssp CCCCEEEECSCTTSSHHHHHHHHHHTT
T ss_pred CCCCeEEEECcCCCCHHHHHHHHHHHc
Confidence 456789999999999999999998754
No 336
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=90.70 E-value=0.14 Score=46.41 Aligned_cols=28 Identities=21% Similarity=0.387 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.|.|++|||||+..|.+...+.
T Consensus 115 ~~Ge~~~LiG~NGsGKSTLlkiL~Gll~ 142 (607)
T 3bk7_A 115 KDGMVVGIVGPNGTGKTTAVKILAGQLI 142 (607)
T ss_dssp CTTSEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCCEEEEECCCCChHHHHHHHHhCCCC
Confidence 3678999999999999999999888665
No 337
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=90.64 E-value=0.15 Score=37.77 Aligned_cols=21 Identities=33% Similarity=0.564 Sum_probs=18.9
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+....+..
T Consensus 50 ~i~vvG~~g~GKSsll~~l~~ 70 (193)
T 2ged_A 50 SIIIAGPQNSGKTSLLTLLTT 70 (193)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 699999999999999887765
No 338
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=90.55 E-value=0.16 Score=36.87 Aligned_cols=21 Identities=29% Similarity=0.453 Sum_probs=18.4
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 9 ~i~v~G~~~~GKSsli~~l~~ 29 (177)
T 1wms_A 9 KVILLGDGGVGKSSLMNRYVT 29 (177)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 589999999999999887764
No 339
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=90.53 E-value=0.14 Score=37.22 Aligned_cols=22 Identities=23% Similarity=0.360 Sum_probs=19.1
Q ss_pred EEEecCCCCCchhHHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~ 120 (186)
.|++.|.+|+|||+..+.++.-
T Consensus 11 ~i~v~G~~~~GKssli~~l~~~ 32 (181)
T 2fn4_A 11 KLVVVGGGGVGKSALTIQFIQS 32 (181)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 5899999999999998877663
No 340
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=90.52 E-value=0.17 Score=39.19 Aligned_cols=25 Identities=32% Similarity=0.376 Sum_probs=23.0
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.-|+|-|.-|||||+.++.+.++|.
T Consensus 3 kFI~~EG~dGsGKsTq~~~L~~~L~ 27 (205)
T 4hlc_A 3 AFITFEGPEGSGKTTVINEVYHRLV 27 (205)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHH
Confidence 4699999999999999999999985
No 341
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=90.44 E-value=0.16 Score=43.81 Aligned_cols=26 Identities=27% Similarity=0.275 Sum_probs=23.5
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
....|+|.|++|+|||..++.+.+.+
T Consensus 166 ~~~~vLL~GppGtGKT~lA~aia~~~ 191 (444)
T 2zan_A 166 PWRGILLFGPPGTGKSYLAKAVATEA 191 (444)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHC
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHc
Confidence 45789999999999999999999876
No 342
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=90.42 E-value=0.14 Score=43.98 Aligned_cols=23 Identities=22% Similarity=0.250 Sum_probs=20.6
Q ss_pred CCeEEEecCCCCCchhHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVV 118 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il 118 (186)
..+.+.|.|++|+|||+.++.+.
T Consensus 177 ~Gei~~I~G~sGsGKTTLl~~la 199 (400)
T 3lda_A 177 TGSITELFGEFRTGKSQLCHTLA 199 (400)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHH
T ss_pred CCcEEEEEcCCCCChHHHHHHHH
Confidence 67789999999999999998765
No 343
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2
Probab=90.37 E-value=0.18 Score=38.12 Aligned_cols=24 Identities=21% Similarity=0.286 Sum_probs=19.3
Q ss_pred CCeEEEecCCCCCchhHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
+.-.|++.|.+|+|||...+.++.
T Consensus 6 ~~~ki~vvG~~~~GKTsli~~l~~ 29 (214)
T 2fh5_B 6 SQRAVLFVGLCDSGKTLLFVRLLT 29 (214)
T ss_dssp --CEEEEECSTTSSHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHhC
Confidence 445699999999999999887775
No 344
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=90.35 E-value=0.17 Score=36.61 Aligned_cols=21 Identities=24% Similarity=0.287 Sum_probs=18.7
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 17 ~i~v~G~~~~GKSsli~~l~~ 37 (179)
T 1z0f_A 17 KYIIIGDMGVGKSCLLHQFTE 37 (179)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 599999999999999888765
No 345
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=90.31 E-value=0.17 Score=36.14 Aligned_cols=21 Identities=29% Similarity=0.362 Sum_probs=18.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 8 ~i~v~G~~~~GKssli~~l~~ 28 (170)
T 1r2q_A 8 KLVLLGESAVGKSSLVLRFVK 28 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 489999999999999887765
No 346
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=90.30 E-value=0.26 Score=41.25 Aligned_cols=26 Identities=19% Similarity=0.253 Sum_probs=23.6
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...|.|.|.+|||||+..+.++..+.
T Consensus 74 ~~~v~lvG~pgaGKSTLln~L~~~~~ 99 (349)
T 2www_A 74 AFRVGLSGPPGAGKSTFIEYFGKMLT 99 (349)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHHhh
Confidence 56799999999999999999999775
No 347
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=90.26 E-value=0.25 Score=38.99 Aligned_cols=27 Identities=15% Similarity=0.023 Sum_probs=21.4
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+.++++|+.|+|||+.+..++.-+.
T Consensus 11 ~G~i~litG~mGsGKTT~ll~~~~r~~ 37 (223)
T 2b8t_A 11 IGWIEFITGPMFAGKTAELIRRLHRLE 37 (223)
T ss_dssp CCEEEEEECSTTSCHHHHHHHHHHHHH
T ss_pred CcEEEEEECCCCCcHHHHHHHHHHHHH
Confidence 467899999999999998766665444
No 348
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=90.24 E-value=0.17 Score=36.82 Aligned_cols=21 Identities=29% Similarity=0.550 Sum_probs=18.4
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 20 ki~v~G~~~~GKSsli~~l~~ 40 (187)
T 2a9k_A 20 KVIMVGSGGVGKSALTLQFMY 40 (187)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhh
Confidence 599999999999999877764
No 349
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=90.22 E-value=0.15 Score=36.53 Aligned_cols=21 Identities=33% Similarity=0.409 Sum_probs=18.3
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 5 ~i~v~G~~~~GKssli~~l~~ 25 (170)
T 1g16_A 5 KILLIGDSGVGKSCLLVRFVE 25 (170)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHh
Confidence 489999999999999887764
No 350
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=90.17 E-value=0.17 Score=36.32 Aligned_cols=21 Identities=29% Similarity=0.340 Sum_probs=18.2
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 5 ~i~v~G~~~~GKssli~~l~~ 25 (172)
T 2erx_A 5 RVAVFGAGGVGKSSLVLRFVK 25 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 589999999999998877764
No 351
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=90.17 E-value=0.18 Score=36.97 Aligned_cols=21 Identities=29% Similarity=0.330 Sum_probs=18.4
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 13 ki~v~G~~~~GKSsli~~l~~ 33 (195)
T 3bc1_A 13 KFLALGDSGVGKTSVLYQYTD 33 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 589999999999998877765
No 352
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=90.15 E-value=0.18 Score=37.16 Aligned_cols=22 Identities=23% Similarity=0.205 Sum_probs=19.3
Q ss_pred EEEecCCCCCchhHHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~ 120 (186)
.|++.|.+|+|||+..+.++.-
T Consensus 9 ki~v~G~~~~GKSsli~~l~~~ 30 (208)
T 3clv_A 9 KTVLLGESSVGKSSIVLRLTKD 30 (208)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 5899999999999998887763
No 353
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=90.14 E-value=0.4 Score=38.14 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=27.7
Q ss_pred CCchHHHhHHHHHHHHHhhCC-CeEEEecCCCCCchhHHHHHHHH
Q psy18111 76 LPPHIFAIAGSAYRWLRDRSE-DQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 76 ~~PHi~~~a~~a~~~~~~~~~-~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
+|.-+...-.+....+..... .=.|++.|++|+|||+....++.
T Consensus 17 l~~~~~~~l~~~~~~~~~~~~~~~~I~vvG~~g~GKSSLin~l~~ 61 (270)
T 1h65_A 17 FAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIG 61 (270)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCCEEEEEEEESTTSSHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHhhcCCCCeEEEEECCCCCCHHHHHHHHhC
Confidence 333333333334444444433 33699999999999999888775
No 354
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=90.11 E-value=0.19 Score=38.70 Aligned_cols=25 Identities=32% Similarity=0.640 Sum_probs=20.9
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
..+.+++.|++|+|||..+..++..
T Consensus 29 ~G~l~~i~G~pG~GKT~l~l~~~~~ 53 (251)
T 2zts_A 29 EGTTVLLTGGTGTGKTTFAAQFIYK 53 (251)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHH
Confidence 5678999999999999988776543
No 355
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=90.09 E-value=0.18 Score=37.21 Aligned_cols=21 Identities=24% Similarity=0.461 Sum_probs=18.7
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 23 ki~vvG~~~~GKSsli~~l~~ 43 (190)
T 3con_A 23 KLVVVGAGGVGKSALTIQLIQ 43 (190)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 589999999999999888765
No 356
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=90.08 E-value=0.22 Score=43.77 Aligned_cols=27 Identities=30% Similarity=0.304 Sum_probs=23.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
-+..|+|.|++|+|||+.++.+...+-
T Consensus 48 ~p~gvLL~GppGtGKT~Laraia~~~~ 74 (476)
T 2ce7_A 48 MPKGILLVGPPGTGKTLLARAVAGEAN 74 (476)
T ss_dssp CCSEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHcC
Confidence 456799999999999999999987543
No 357
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=90.06 E-value=0.2 Score=46.84 Aligned_cols=32 Identities=25% Similarity=0.276 Sum_probs=27.0
Q ss_pred HHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 91 LRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 91 ~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
++..+....++|.|++|+|||+.++.+.+.+.
T Consensus 185 ~l~~~~~~~vlL~G~pG~GKT~la~~la~~l~ 216 (854)
T 1qvr_A 185 ILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIV 216 (854)
T ss_dssp HHHCSSCCCCEEEECTTSCHHHHHHHHHHHHH
T ss_pred HHhcCCCCceEEEcCCCCCHHHHHHHHHHHHh
Confidence 33455666799999999999999999999885
No 358
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=90.06 E-value=0.19 Score=36.16 Aligned_cols=22 Identities=27% Similarity=0.342 Sum_probs=18.8
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
=.|++.|.+|+|||+..+.+..
T Consensus 8 ~~i~v~G~~~~GKssl~~~l~~ 29 (171)
T 1upt_A 8 MRILILGLDGAGKTTILYRLQV 29 (171)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHhc
Confidence 4699999999999999877754
No 359
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=90.00 E-value=0.19 Score=35.91 Aligned_cols=21 Identities=24% Similarity=0.290 Sum_probs=18.3
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||...+.++.
T Consensus 2 ki~~~G~~~~GKssl~~~l~~ 22 (164)
T 1r8s_A 2 RILMVGLDAAGKTTILYKLKL 22 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 388999999999999888765
No 360
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=89.99 E-value=0.3 Score=42.08 Aligned_cols=27 Identities=26% Similarity=0.277 Sum_probs=23.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
....+.|.|++|||||+..+.+...+.
T Consensus 68 ~~~~valvG~nGaGKSTLln~L~Gl~~ 94 (413)
T 1tq4_A 68 SVLNVAVTGETGSGKSSFINTLRGIGN 94 (413)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHTCCT
T ss_pred CCeEEEEECCCCCcHHHHHHHHhCCCC
Confidence 445899999999999999999988654
No 361
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=89.94 E-value=0.19 Score=37.46 Aligned_cols=21 Identities=19% Similarity=0.205 Sum_probs=18.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 22 ki~ivG~~~vGKSsL~~~~~~ 42 (184)
T 3ihw_A 22 KVGIVGNLSSGKSALVHRYLT 42 (184)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 699999999999999877665
No 362
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=89.92 E-value=0.14 Score=42.02 Aligned_cols=23 Identities=30% Similarity=0.436 Sum_probs=19.3
Q ss_pred eEEEecCCCCCchhHHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
=.|++.|++|+|||+..+.+...
T Consensus 19 ~~I~lvG~nG~GKSTLl~~L~g~ 41 (301)
T 2qnr_A 19 FTLMVVGESGLGKSTLINSLFLT 41 (301)
T ss_dssp EEEEEEEETTSSHHHHHHHHHC-
T ss_pred EEEEEECCCCCCHHHHHHHHhCC
Confidence 45799999999999999997653
No 363
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=89.92 E-value=0.19 Score=36.77 Aligned_cols=21 Identities=24% Similarity=0.463 Sum_probs=18.6
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 6 ki~v~G~~~~GKSsli~~l~~ 26 (189)
T 4dsu_A 6 KLVVVGADGVGKSALTIQLIQ 26 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 489999999999999888775
No 364
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=89.92 E-value=0.18 Score=36.42 Aligned_cols=21 Identities=33% Similarity=0.539 Sum_probs=18.0
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.+..
T Consensus 6 ki~i~G~~~vGKSsl~~~l~~ 26 (175)
T 2nzj_A 6 RVVLLGDPGVGKTSLASLFAG 26 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCccHHHHHHHHhc
Confidence 589999999999998877654
No 365
>2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20
Probab=89.91 E-value=0.39 Score=39.51 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=27.6
Q ss_pred HHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 87 AYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 87 a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
.+++....++..+++|.|+.|.|||+.++.+.+-
T Consensus 8 ~L~~~i~~~~~~~~Lf~Gp~G~GKtt~a~~la~~ 41 (305)
T 2gno_A 8 TLKRIIEKSEGISILINGEDLSYPREVSLELPEY 41 (305)
T ss_dssp HHHHHHHTCSSEEEEEECSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCcEEEEECCCCCCHHHHHHHHHHh
Confidence 3455556556789999999999999999998874
No 366
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=89.83 E-value=0.2 Score=36.70 Aligned_cols=21 Identities=24% Similarity=0.430 Sum_probs=18.6
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 20 ki~v~G~~~~GKSsl~~~l~~ 40 (183)
T 3kkq_A 20 KLVVVGDGGVGKSALTIQFFQ 40 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 589999999999999888775
No 367
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=89.80 E-value=0.17 Score=39.35 Aligned_cols=22 Identities=23% Similarity=0.511 Sum_probs=19.6
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
=.|++.|.+|+|||+..+.++.
T Consensus 30 ~~i~lvG~~g~GKStlin~l~g 51 (239)
T 3lxx_A 30 LRIVLVGKTGAGKSATGNSILG 51 (239)
T ss_dssp EEEEEECCTTSSHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHcC
Confidence 3699999999999999988876
No 368
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=89.75 E-value=0.16 Score=37.44 Aligned_cols=21 Identities=19% Similarity=0.268 Sum_probs=18.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 25 ~i~v~G~~~~GKSsli~~l~~ 45 (195)
T 3pqc_A 25 EVAFVGRSNVGKSSLLNALFN 45 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 589999999999999887765
No 369
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=89.73 E-value=0.2 Score=36.42 Aligned_cols=21 Identities=24% Similarity=0.427 Sum_probs=18.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 14 ki~v~G~~~~GKSsli~~l~~ 34 (181)
T 2efe_B 14 KLVLLGDVGAGKSSLVLRFVK 34 (181)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 589999999999999877765
No 370
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=89.69 E-value=0.21 Score=36.33 Aligned_cols=21 Identities=29% Similarity=0.336 Sum_probs=18.3
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 12 ~i~v~G~~~~GKssli~~l~~ 32 (180)
T 2g6b_A 12 KVMLVGDSGVGKTCLLVRFKD 32 (180)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHh
Confidence 589999999999999877765
No 371
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=89.67 E-value=0.23 Score=36.72 Aligned_cols=25 Identities=32% Similarity=0.418 Sum_probs=20.5
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
...=.|++.|.+|+|||+..+.++.
T Consensus 6 ~~~~ki~vvG~~~~GKSsli~~l~~ 30 (199)
T 2gf0_A 6 SNDYRVVVFGAGGVGKSSLVLRFVK 30 (199)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHH
T ss_pred CCeeEEEEECCCCCcHHHHHHHHHc
Confidence 3445699999999999999887765
No 372
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=89.65 E-value=0.19 Score=36.44 Aligned_cols=24 Identities=17% Similarity=0.255 Sum_probs=19.8
Q ss_pred CCeEEEecCCCCCchhHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
+.-.|++.|.+|+|||+..+.++.
T Consensus 7 ~~~~i~v~G~~~~GKssl~~~l~~ 30 (178)
T 2lkc_A 7 RPPVVTIMGHVDHGKTTLLDAIRH 30 (178)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHhC
Confidence 344699999999999999887764
No 373
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=89.62 E-value=0.21 Score=43.98 Aligned_cols=28 Identities=32% Similarity=0.410 Sum_probs=25.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+.+.+.+.|++|+|||+.++.+...+.
T Consensus 279 ~~G~i~~i~G~~GsGKSTLl~~l~g~~~ 306 (525)
T 1tf7_A 279 FKDSIILATGATGTGKTLLVSRFVENAC 306 (525)
T ss_dssp ESSCEEEEEECTTSSHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 5778899999999999999999998776
No 374
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=89.62 E-value=0.15 Score=44.01 Aligned_cols=24 Identities=29% Similarity=0.365 Sum_probs=20.3
Q ss_pred eEEEecCCCCCchhHHHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
=.|++.|+||+|||+..+.++...
T Consensus 32 f~I~lvG~sGaGKSTLln~L~g~~ 55 (418)
T 2qag_C 32 FTLMVVGESGLGKSTLINSLFLTD 55 (418)
T ss_dssp EEEEEECCTTSSHHHHHHHHTTCC
T ss_pred EEEEEECCCCCcHHHHHHHHhCCC
Confidence 347999999999999998887654
No 375
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=89.60 E-value=0.21 Score=44.17 Aligned_cols=25 Identities=28% Similarity=0.351 Sum_probs=21.9
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
+..|+|.|++|+|||+.++.+...+
T Consensus 64 p~GvLL~GppGtGKTtLaraIa~~~ 88 (499)
T 2dhr_A 64 PKGVLLVGPPGVGKTHLARAVAGEA 88 (499)
T ss_dssp CSEEEEECSSSSSHHHHHHHHHHHT
T ss_pred CceEEEECCCCCCHHHHHHHHHHHh
Confidence 4569999999999999999988764
No 376
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=89.58 E-value=0.21 Score=37.24 Aligned_cols=21 Identities=29% Similarity=0.550 Sum_probs=18.4
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 16 ki~v~G~~~~GKSsli~~l~~ 36 (206)
T 2bov_A 16 KVIMVGSGGVGKSALTLQFMY 36 (206)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 589999999999999877764
No 377
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=89.55 E-value=0.12 Score=46.93 Aligned_cols=24 Identities=33% Similarity=0.475 Sum_probs=20.8
Q ss_pred CCCeEEEecCCCCCchhHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVV 118 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il 118 (186)
.+.+.+.|.|+||||||+..+.++
T Consensus 346 ~~Ge~vaIiGpnGsGKSTLl~~i~ 369 (670)
T 3ux8_A 346 PLGTFVAVTGVSGSGKSTLVNEVL 369 (670)
T ss_dssp ETTSEEEEECSTTSSHHHHHTTTH
T ss_pred cCCCEEEEEeeCCCCHHHHHHHHH
Confidence 367889999999999999998665
No 378
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=89.54 E-value=0.2 Score=35.98 Aligned_cols=20 Identities=35% Similarity=0.513 Sum_probs=17.6
Q ss_pred EEEecCCCCCchhHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVV 118 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il 118 (186)
.|++.|.+|+|||+..+.+.
T Consensus 4 ki~ivG~~~~GKSsli~~l~ 23 (169)
T 3q85_A 4 KVMLVGESGVGKSTLAGTFG 23 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 48999999999999988775
No 379
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=89.52 E-value=0.21 Score=36.97 Aligned_cols=21 Identities=38% Similarity=0.490 Sum_probs=18.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 27 ki~v~G~~~~GKSsLi~~l~~ 47 (193)
T 2oil_A 27 KVVLIGESGVGKTNLLSRFTR 47 (193)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHhc
Confidence 589999999999998887765
No 380
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=89.49 E-value=0.18 Score=36.87 Aligned_cols=21 Identities=24% Similarity=0.400 Sum_probs=18.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 12 ki~v~G~~~~GKSsli~~l~~ 32 (186)
T 2bme_A 12 KFLVIGNAGTGKSCLLHQFIE 32 (186)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 589999999999999887765
No 381
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=89.48 E-value=0.19 Score=44.72 Aligned_cols=27 Identities=26% Similarity=0.325 Sum_probs=24.2
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.+.|.|.+|||||+..|.+...+.
T Consensus 311 ~Ge~~~i~G~NGsGKSTLlk~l~Gl~~ 337 (538)
T 1yqt_A 311 KGEVIGIVGPNGIGKTTFVKMLAGVEE 337 (538)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 578899999999999999999988665
No 382
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=89.48 E-value=0.14 Score=41.91 Aligned_cols=25 Identities=20% Similarity=0.295 Sum_probs=21.8
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..++|.|++|+|||+.++.+.+.+.
T Consensus 47 ~~vll~G~pGtGKT~la~~la~~~~ 71 (331)
T 2r44_A 47 GHILLEGVPGLAKTLSVNTLAKTMD 71 (331)
T ss_dssp CCEEEESCCCHHHHHHHHHHHHHTT
T ss_pred CeEEEECCCCCcHHHHHHHHHHHhC
Confidence 4799999999999999999888543
No 383
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=89.40 E-value=0.19 Score=36.32 Aligned_cols=21 Identities=29% Similarity=0.488 Sum_probs=18.4
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 16 ~i~v~G~~~~GKssli~~l~~ 36 (179)
T 2y8e_A 16 KLVFLGEQSVGKTSLITRFMY 36 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 589999999999999887764
No 384
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=89.40 E-value=0.11 Score=50.99 Aligned_cols=28 Identities=25% Similarity=0.508 Sum_probs=25.4
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.+.+.|+||||||+..+.+++++-
T Consensus 442 ~~G~~vaivG~sGsGKSTll~ll~~~~~ 469 (1321)
T 4f4c_A 442 NAGQTVALVGSSGCGKSTIISLLLRYYD 469 (1321)
T ss_dssp CTTCEEEEEECSSSCHHHHHHHHTTSSC
T ss_pred cCCcEEEEEecCCCcHHHHHHHhccccc
Confidence 4778999999999999999999999765
No 385
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=89.37 E-value=0.19 Score=45.42 Aligned_cols=28 Identities=25% Similarity=0.311 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.+.|.|++|||||+..|.+...+.
T Consensus 380 ~~Gei~~i~G~NGsGKSTLlk~l~Gl~~ 407 (607)
T 3bk7_A 380 RKGEVIGIVGPNGIGKTTFVKMLAGVEE 407 (607)
T ss_dssp ETTCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 3578899999999999999999988655
No 386
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=89.37 E-value=0.32 Score=38.04 Aligned_cols=27 Identities=22% Similarity=0.410 Sum_probs=23.6
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.-.++++|..|+|||+.+..+..+++
T Consensus 13 ~~~i~~~~GkgGvGKTTl~~~La~~l~ 39 (262)
T 1yrb_A 13 ASMIVVFVGTAGSGKTTLTGEFGRYLE 39 (262)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHT
T ss_pred ceEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 456788899999999999999998775
No 387
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=89.31 E-value=0.24 Score=42.90 Aligned_cols=26 Identities=35% Similarity=0.592 Sum_probs=23.5
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..|++.|.+|+|||+++..+..+++
T Consensus 99 ~~vI~ivG~~GvGKTTla~~La~~l~ 124 (432)
T 2v3c_C 99 QNVILLVGIQGSGKTTTAAKLARYIQ 124 (432)
T ss_dssp CCCEEEECCSSSSTTHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 45799999999999999999999887
No 388
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=89.29 E-value=0.22 Score=36.79 Aligned_cols=22 Identities=36% Similarity=0.285 Sum_probs=18.9
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
=.|++.|.+|+|||+..+.++.
T Consensus 21 ~ki~v~G~~~~GKSsli~~l~~ 42 (189)
T 1z06_A 21 FKIIVIGDSNVGKTCLTYRFCA 42 (189)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHc
Confidence 4699999999999999887764
No 389
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=89.28 E-value=0.69 Score=38.56 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=30.3
Q ss_pred HhHHHHHHHHHh-hCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 82 AIAGSAYRWLRD-RSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 82 ~~a~~a~~~~~~-~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..++.....+.. ..+.-.|+++|..|+|||+.+..+...+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~I~i~G~~G~GKSTl~~~L~~~l~ 104 (355)
T 3p32_A 63 EQAQQLLLRLLPDSGNAHRVGITGVPGVGKSTAIEALGMHLI 104 (355)
T ss_dssp HHHHHHHHHHGGGCCCSEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHhhcCCceEEEEECCCCCCHHHHHHHHHHHHH
Confidence 344444444432 34566899999999999999999998876
No 390
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=89.21 E-value=0.3 Score=36.99 Aligned_cols=26 Identities=27% Similarity=0.350 Sum_probs=21.3
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
..-.|++.|.+|+|||+....+..-.
T Consensus 11 ~~~~i~~~G~~g~GKTsl~~~l~~~~ 36 (218)
T 1nrj_B 11 YQPSIIIAGPQNSGKTSLLTLLTTDS 36 (218)
T ss_dssp CCCEEEEECSTTSSHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 33469999999999999988887643
No 391
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=89.19 E-value=0.31 Score=42.25 Aligned_cols=27 Identities=22% Similarity=0.458 Sum_probs=24.5
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+..|++.|..|+|||+++-.+..+|.
T Consensus 99 ~~~vI~ivG~~GvGKTT~a~~LA~~l~ 125 (433)
T 2xxa_A 99 PPAVVLMAGLQGAGKTTSVGKLGKFLR 125 (433)
T ss_dssp SSEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 456899999999999999999999998
No 392
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=89.19 E-value=0.11 Score=50.81 Aligned_cols=28 Identities=21% Similarity=0.434 Sum_probs=25.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.+.+.|+||||||+..+.+++++.
T Consensus 414 ~~G~~~~ivG~sGsGKSTl~~ll~g~~~ 441 (1284)
T 3g5u_A 414 KSGQTVALVGNSGCGKSTTVQLMQRLYD 441 (1284)
T ss_dssp CTTCEEEEECCSSSSHHHHHHHTTTSSC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 4778999999999999999999998765
No 393
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=89.17 E-value=0.18 Score=37.29 Aligned_cols=23 Identities=22% Similarity=0.276 Sum_probs=19.6
Q ss_pred CeEEEecCCCCCchhHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
.-.|++.|.+|+|||+..+.++.
T Consensus 23 ~~~i~v~G~~~~GKSsli~~l~~ 45 (195)
T 1svi_A 23 LPEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp CCEEEEEEBTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 34699999999999999888765
No 394
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=89.17 E-value=0.22 Score=45.03 Aligned_cols=25 Identities=24% Similarity=0.496 Sum_probs=22.4
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.+.|.|++||||||..+.+...+.
T Consensus 379 Eiv~iiG~NGsGKSTLlk~l~Gl~~ 403 (608)
T 3j16_B 379 EILVMMGENGTGKTTLIKLLAGALK 403 (608)
T ss_dssp CEEEEESCTTSSHHHHHHHHHTSSC
T ss_pred eEEEEECCCCCcHHHHHHHHhcCCC
Confidence 5689999999999999999988765
No 395
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=89.15 E-value=0.23 Score=36.62 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=18.7
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 18 ki~v~G~~~~GKSsli~~l~~ 38 (196)
T 3tkl_A 18 KLLLIGDSGVGKSCLLLRFAD 38 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 589999999999999888775
No 396
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=89.10 E-value=0.24 Score=36.76 Aligned_cols=21 Identities=24% Similarity=0.302 Sum_probs=18.4
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 23 ki~v~G~~~~GKSsli~~l~~ 43 (191)
T 2a5j_A 23 KYIIIGDTGVGKSCLLLQFTD 43 (191)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHhc
Confidence 589999999999999877765
No 397
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=89.09 E-value=0.24 Score=36.08 Aligned_cols=21 Identities=24% Similarity=0.194 Sum_probs=18.1
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 7 ~i~~~G~~~~GKssl~~~l~~ 27 (186)
T 1mh1_A 7 KCVVVGDGAVGKTCLLISYTT 27 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 489999999999999877664
No 398
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=89.04 E-value=0.089 Score=43.65 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=23.8
Q ss_pred HhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 92 RDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 92 ~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..-.+.+.+.+.|.||+|||+..+.++..+.
T Consensus 168 ~~~~~G~~~~lvG~sG~GKSTLln~L~g~~~ 198 (307)
T 1t9h_A 168 IPHFQDKTTVFAGQSGVGKSSLLNAISPELG 198 (307)
T ss_dssp GGGGTTSEEEEEESHHHHHHHHHHHHCC---
T ss_pred HhhcCCCEEEEECCCCCCHHHHHHHhccccc
Confidence 3444678999999999999999998876554
No 399
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=89.03 E-value=0.5 Score=39.20 Aligned_cols=38 Identities=13% Similarity=0.126 Sum_probs=29.6
Q ss_pred HHHHHHH-HhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 85 GSAYRWL-RDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 85 ~~a~~~~-~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+...+ ....+...|.+.|..|+|||+.++.+...+.
T Consensus 43 ~~~~~~l~~~~~~~~~i~i~G~~g~GKSTl~~~l~~~~~ 81 (341)
T 2p67_A 43 TQLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLI 81 (341)
T ss_dssp HHHHHHHGGGCSCSEEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred HHHHHhCCcccCCCEEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 3444444 2346778899999999999999999998876
No 400
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D*
Probab=88.97 E-value=0.42 Score=43.03 Aligned_cols=27 Identities=22% Similarity=0.430 Sum_probs=24.3
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.+..++++|..|+|||++...++..+.
T Consensus 163 ~~~~~vi~G~pGTGKTt~l~~ll~~l~ 189 (608)
T 1w36_D 163 TRRISVISGGPGTGKTTTVAKLLAALI 189 (608)
T ss_dssp TBSEEEEECCTTSTHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 356899999999999999999999887
No 401
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=88.96 E-value=0.31 Score=36.89 Aligned_cols=23 Identities=26% Similarity=0.270 Sum_probs=18.4
Q ss_pred CeEEEecCCCCCchhHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
.+.++++|..|+|||+.+..+++
T Consensus 3 g~i~vi~G~~gsGKTT~ll~~~~ 25 (184)
T 2orw_A 3 GKLTVITGPMYSGKTTELLSFVE 25 (184)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHH
T ss_pred cEEEEEECCCCCCHHHHHHHHHH
Confidence 46789999999999999744444
No 402
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=88.96 E-value=0.26 Score=46.09 Aligned_cols=25 Identities=24% Similarity=0.359 Sum_probs=23.2
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..++|.|++|+|||+.++.+.+.+.
T Consensus 589 ~~vLl~Gp~GtGKT~lA~~la~~~~ 613 (854)
T 1qvr_A 589 GSFLFLGPTGVGKTELAKTLAATLF 613 (854)
T ss_dssp EEEEEBSCSSSSHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhc
Confidence 5899999999999999999999885
No 403
>2xau_A PRE-mRNA-splicing factor ATP-dependent RNA helica; hydrolase, ribosome biogenesis, ATPase, ATP-binding, OB-fold; HET: ADP; 1.90A {Saccharomyces cerevisiae} PDB: 3kx2_B*
Probab=88.95 E-value=0.56 Score=43.48 Aligned_cols=60 Identities=27% Similarity=0.478 Sum_probs=33.6
Q ss_pred eCCCCCCCCCCHHHHHHHhcCCCCCCCchHHHhHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHHHH
Q psy18111 51 VNPYKPLNIYSAELARAYRTRGPFQLPPHIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVV 118 (186)
Q Consensus 51 vNP~~~l~~y~~~~~~~y~~~~~~~~~PHi~~~a~~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il 118 (186)
+|||..+++ ++.......... .+|-.++ +.+....+. .++.+++.|++|||||+....++
T Consensus 71 ~~~f~~~~l-~~~~~~~l~~r~--~lP~~~q---~~~i~~~l~--~~~~vii~gpTGSGKTtllp~ll 130 (773)
T 2xau_A 71 INPFTGREF-TPKYVDILKIRR--ELPVHAQ---RDEFLKLYQ--NNQIMVFVGETGSGKTTQIPQFV 130 (773)
T ss_dssp BCTTTCSBC-CHHHHHHHHHHT--TSGGGGG---HHHHHHHHH--HCSEEEEECCTTSSHHHHHHHHH
T ss_pred CCCccccCC-CHHHHHHHHHhh--cCChHHH---HHHHHHHHh--CCCeEEEECCCCCCHHHHHHHHH
Confidence 467776653 444443332221 3443332 233333333 35789999999999999655553
No 404
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=88.94 E-value=0.25 Score=45.44 Aligned_cols=24 Identities=33% Similarity=0.400 Sum_probs=22.5
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.++|.|++|+|||+.++.+-+.+.
T Consensus 523 ~~Ll~Gp~GtGKT~lA~ala~~l~ 546 (758)
T 3pxi_A 523 SFIFLGPTGVGKTELARALAESIF 546 (758)
T ss_dssp EEEEESCTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhc
Confidence 699999999999999999999874
No 405
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=88.94 E-value=0.21 Score=36.21 Aligned_cols=21 Identities=33% Similarity=0.461 Sum_probs=18.2
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.+..
T Consensus 8 ki~v~G~~~~GKssl~~~l~~ 28 (178)
T 2hxs_A 8 KIVVLGDGASGKTSLTTCFAQ 28 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHG
T ss_pred EEEEECcCCCCHHHHHHHHHh
Confidence 589999999999998877764
No 406
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=88.92 E-value=0.19 Score=36.80 Aligned_cols=21 Identities=29% Similarity=0.332 Sum_probs=18.2
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 3 ki~v~G~~~~GKSsli~~l~~ 23 (190)
T 2cxx_A 3 TIIFAGRSNVGKSTLIYRLTG 23 (190)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 388999999999999887765
No 407
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C
Probab=88.86 E-value=0.26 Score=35.87 Aligned_cols=22 Identities=18% Similarity=0.105 Sum_probs=18.5
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
=.|++.|.+|+|||+..+.+..
T Consensus 9 ~ki~v~G~~~~GKssl~~~~~~ 30 (182)
T 3bwd_D 9 IKCVTVGDGAVGKTCLLISYTS 30 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 3589999999999998877664
No 408
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=88.86 E-value=0.25 Score=36.90 Aligned_cols=21 Identities=38% Similarity=0.537 Sum_probs=18.6
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 10 ki~v~G~~~~GKSsli~~l~~ 30 (207)
T 1vg8_A 10 KVIILGDSGVGKTSLMNQYVN 30 (207)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 589999999999999887765
No 409
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=88.84 E-value=0.19 Score=35.96 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=17.6
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.+..
T Consensus 4 ki~~vG~~~~GKSsli~~l~~ 24 (166)
T 3q72_A 4 KVLLLGAPGVGKSALARIFGG 24 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHcC
Confidence 489999999999998877643
No 410
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=88.80 E-value=0.35 Score=39.75 Aligned_cols=28 Identities=14% Similarity=0.195 Sum_probs=24.5
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.+++.|.+|+|||+.+..+....+
T Consensus 66 ~~G~l~li~G~pG~GKTtl~l~ia~~~a 93 (315)
T 3bh0_A 66 KRRNFVLIAARPSMGKTAFALKQAKNMS 93 (315)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 5778999999999999999888887666
No 411
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=88.74 E-value=0.26 Score=36.42 Aligned_cols=21 Identities=24% Similarity=0.202 Sum_probs=18.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 24 ki~vvG~~~~GKSsli~~l~~ 44 (189)
T 2gf9_A 24 KLLLIGNSSVGKTSFLFRYAD 44 (189)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 589999999999999887765
No 412
>3e1s_A Exodeoxyribonuclease V, subunit RECD; alpha and beta protein, ATP-binding, nucleotide-binding, HYD; 2.20A {Deinococcus radiodurans} PDB: 3gp8_A 3gpl_A*
Probab=88.67 E-value=0.45 Score=42.64 Aligned_cols=27 Identities=19% Similarity=0.460 Sum_probs=24.8
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.++.++++|..|+|||++++.++..+.
T Consensus 203 ~~~~~~I~G~pGTGKTt~i~~l~~~l~ 229 (574)
T 3e1s_A 203 GHRLVVLTGGPGTGKSTTTKAVADLAE 229 (574)
T ss_dssp TCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred hCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 567899999999999999999999887
No 413
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=88.67 E-value=0.56 Score=34.48 Aligned_cols=25 Identities=20% Similarity=0.327 Sum_probs=20.9
Q ss_pred hCCCeEEEecCCCCCchhHHHHHHH
Q psy18111 94 RSEDQCIIVSGESGSGKTQAASMVV 118 (186)
Q Consensus 94 ~~~~Q~IilsGeSGsGKt~~~k~il 118 (186)
.++.=.|++.|.+|+|||+..+.++
T Consensus 13 ~~~~~~i~v~G~~~~GKssl~~~l~ 37 (187)
T 1zj6_A 13 NHQEHKVIIVGLDNAGKTTILYQFS 37 (187)
T ss_dssp TTSCEEEEEEESTTSSHHHHHHHHH
T ss_pred CCCccEEEEECCCCCCHHHHHHHHh
Confidence 3455679999999999999988776
No 414
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=88.66 E-value=0.26 Score=36.83 Aligned_cols=23 Identities=17% Similarity=0.287 Sum_probs=19.4
Q ss_pred CeEEEecCCCCCchhHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
.=.|++.|.+|+|||+..+.++.
T Consensus 28 ~~ki~v~G~~~~GKSsli~~l~~ 50 (199)
T 2p5s_A 28 AYKIVLAGDAAVGKSSFLMRLCK 50 (199)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHH
T ss_pred CeEEEEECcCCCCHHHHHHHHHh
Confidence 34699999999999998887764
No 415
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=88.65 E-value=0.27 Score=36.20 Aligned_cols=21 Identities=33% Similarity=0.412 Sum_probs=18.6
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 17 ~i~v~G~~~~GKssli~~l~~ 37 (195)
T 1x3s_A 17 KILIIGESGVGKSSLLLRFTD 37 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 599999999999999887765
No 416
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=88.64 E-value=0.23 Score=36.62 Aligned_cols=21 Identities=33% Similarity=0.422 Sum_probs=18.6
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.+..
T Consensus 9 ki~v~G~~~vGKSsli~~l~~ 29 (184)
T 1m7b_A 9 KIVVVGDSQCGKTALLHVFAK 29 (184)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 589999999999999887765
No 417
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=88.62 E-value=0.23 Score=35.90 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=17.9
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 11 ~i~v~G~~~~GKssl~~~l~~ 31 (181)
T 3tw8_B 11 KLLIIGDSGVGKSSLLLRFAD 31 (181)
T ss_dssp EEEEECCTTSCHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 589999999999998777653
No 418
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=88.60 E-value=0.69 Score=36.63 Aligned_cols=34 Identities=18% Similarity=0.392 Sum_probs=23.9
Q ss_pred HHHHHHHhhCC-CeEEEecCCCCCchhHHHHHHHH
Q psy18111 86 SAYRWLRDRSE-DQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 86 ~a~~~~~~~~~-~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
+..+.+..... .=.|++.|.+|+|||+....++.
T Consensus 24 ~~~~~~~~~~~~~~~I~lvG~~g~GKSSLin~l~~ 58 (262)
T 3def_A 24 EFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIG 58 (262)
T ss_dssp HHHHHHHHTTCCEEEEEEEECTTSSHHHHHHHHHT
T ss_pred HHHHHHhhccCCCcEEEEECCCCCCHHHHHHHHhC
Confidence 33344444333 33699999999999999888775
No 419
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B
Probab=88.49 E-value=0.2 Score=45.12 Aligned_cols=23 Identities=26% Similarity=0.316 Sum_probs=20.6
Q ss_pred EEecCCCCCchhHHHHHHHHHHh
Q psy18111 100 IIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 100 IilsGeSGsGKt~~~k~il~~l~ 122 (186)
|++.|++|||||+..+.+...+.
T Consensus 48 iaIvG~nGsGKSTLL~~I~Gl~~ 70 (608)
T 3szr_A 48 IAVIGDQSSGKSSVLEALSGVAL 70 (608)
T ss_dssp EECCCCTTSCHHHHHHHHHSCC-
T ss_pred EEEECCCCChHHHHHHHHhCCCC
Confidence 89999999999999999998753
No 420
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=88.47 E-value=0.27 Score=36.59 Aligned_cols=24 Identities=17% Similarity=0.303 Sum_probs=19.7
Q ss_pred CCeEEEecCCCCCchhHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
..=.|++.|.+|+|||+..+.++.
T Consensus 27 ~~~ki~v~G~~~vGKSsli~~l~~ 50 (196)
T 2atv_A 27 AEVKLAIFGRAGVGKSALVVRFLT 50 (196)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHHh
Confidence 334699999999999998877765
No 421
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=88.41 E-value=0.28 Score=36.01 Aligned_cols=25 Identities=16% Similarity=0.179 Sum_probs=19.8
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
.+.=.|++.|.+|+|||+..+.++.
T Consensus 16 ~~~~~i~v~G~~~~GKssl~~~l~~ 40 (186)
T 1ksh_A 16 ERELRLLMLGLDNAGKTTILKKFNG 40 (186)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHTT
T ss_pred CCeeEEEEECCCCCCHHHHHHHHhc
Confidence 3445699999999999999777654
No 422
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=88.39 E-value=0.28 Score=36.43 Aligned_cols=22 Identities=18% Similarity=0.339 Sum_probs=18.9
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
=.|++.|.+|+|||...+.++.
T Consensus 22 ~ki~vvG~~~vGKTsLi~~l~~ 43 (187)
T 3c5c_A 22 VNLAILGRRGAGKSALTVKFLT 43 (187)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCcHHHHHHHHHh
Confidence 3699999999999999877765
No 423
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A*
Probab=88.37 E-value=0.28 Score=36.37 Aligned_cols=21 Identities=29% Similarity=0.281 Sum_probs=18.6
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 25 ki~~vG~~~~GKSsl~~~l~~ 45 (194)
T 3reg_A 25 KIVVVGDGAVGKTCLLLAFSK 45 (194)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHhc
Confidence 699999999999998877765
No 424
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=88.27 E-value=0.36 Score=44.25 Aligned_cols=25 Identities=20% Similarity=0.397 Sum_probs=22.4
Q ss_pred eEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
-.++|.|++|+|||+.++.+.+.+.
T Consensus 489 ~~~ll~G~~GtGKT~la~~la~~l~ 513 (758)
T 1r6b_X 489 GSFLFAGPTGVGKTEVTVQLSKALG 513 (758)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCcHHHHHHHHHHHhc
Confidence 3799999999999999999988764
No 425
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=88.25 E-value=0.25 Score=36.00 Aligned_cols=21 Identities=24% Similarity=0.215 Sum_probs=18.4
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 8 ki~~~G~~~~GKSsli~~l~~ 28 (181)
T 3t5g_A 8 KIAILGYRSVGKSSLTIQFVE 28 (181)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 589999999999999887763
No 426
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=88.25 E-value=0.27 Score=46.99 Aligned_cols=25 Identities=16% Similarity=0.288 Sum_probs=22.3
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
.+.+.+.|.|++|||||+..|.|..
T Consensus 459 ~~Ge~v~LiGpNGsGKSTLLk~Lag 483 (986)
T 2iw3_A 459 KRARRYGICGPNGCGKSTLMRAIAN 483 (986)
T ss_dssp ETTCEEEEECSTTSSHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhC
Confidence 3778899999999999999999984
No 427
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=88.23 E-value=0.24 Score=36.03 Aligned_cols=21 Identities=24% Similarity=0.265 Sum_probs=18.2
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||...+.++.
T Consensus 9 ki~~vG~~~vGKTsli~~l~~ 29 (178)
T 2iwr_A 9 RLGVLGDARSGKSSLIHRFLT 29 (178)
T ss_dssp EEEEECCGGGCHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 489999999999998777665
No 428
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=88.19 E-value=0.35 Score=36.32 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=22.4
Q ss_pred HHHHHhhCCCeEEEecCCCCCchhHHHHHHH
Q psy18111 88 YRWLRDRSEDQCIIVSGESGSGKTQAASMVV 118 (186)
Q Consensus 88 ~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il 118 (186)
++.+-...+.=.|++.|.+|+|||+..+.+.
T Consensus 16 l~~~~~~~~~~ki~lvG~~~vGKSsLi~~l~ 46 (198)
T 1f6b_A 16 LQFLGLYKKTGKLVFLGLDNAGKTTLLHMLK 46 (198)
T ss_dssp HHHHTCTTCCEEEEEEEETTSSHHHHHHHHS
T ss_pred HHHhhccCCCcEEEEECCCCCCHHHHHHHHh
Confidence 3444233344569999999999999988765
No 429
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=88.18 E-value=0.3 Score=36.19 Aligned_cols=21 Identities=24% Similarity=0.257 Sum_probs=18.6
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 24 ki~v~G~~~~GKSsli~~l~~ 44 (188)
T 1zd9_A 24 ELTLVGLQYSGKTTFVNVIAS 44 (188)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 589999999999999888765
No 430
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=88.14 E-value=0.25 Score=36.70 Aligned_cols=21 Identities=24% Similarity=0.419 Sum_probs=18.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 25 ki~vvG~~~~GKSsli~~l~~ 45 (192)
T 2fg5_A 25 KVCLLGDTGVGKSSIVCRFVQ 45 (192)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHhc
Confidence 599999999999999887765
No 431
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=88.09 E-value=0.32 Score=40.47 Aligned_cols=26 Identities=23% Similarity=0.138 Sum_probs=22.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
...+.+++.|++|+|||+.+..+...
T Consensus 120 ~~G~i~~I~G~~GsGKTtla~~la~~ 145 (343)
T 1v5w_A 120 ESMAITEAFGEFRTGKTQLSHTLCVT 145 (343)
T ss_dssp CSSEEEEEECCTTCTHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 36678999999999999998887765
No 432
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=88.02 E-value=0.23 Score=39.04 Aligned_cols=24 Identities=29% Similarity=0.534 Sum_probs=20.3
Q ss_pred CeEEEecCCCCCchhHHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
.-.|++.|.+|+|||+....++..
T Consensus 22 ~~~I~lvG~~g~GKStl~n~l~~~ 45 (260)
T 2xtp_A 22 ELRIILVGKTGTGKSAAGNSILRK 45 (260)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHTS
T ss_pred ceEEEEECCCCCCHHHHHHHHhCC
Confidence 346999999999999998888753
No 433
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12
Probab=88.01 E-value=0.15 Score=40.30 Aligned_cols=23 Identities=26% Similarity=0.437 Sum_probs=20.1
Q ss_pred EEecCCCCCchhHHHHHHHHHHh
Q psy18111 100 IIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 100 IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+.|.|++|||||+..+.|.-.+.
T Consensus 30 ~~i~GpnGsGKSTll~~i~g~~~ 52 (227)
T 1qhl_A 30 TTLSGGNGAGKSTTMAAFVTALI 52 (227)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhcccc
Confidence 45899999999999999888766
No 434
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A
Probab=88.00 E-value=0.75 Score=37.37 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=27.0
Q ss_pred HHHHHHHhhC-C-CeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 86 SAYRWLRDRS-E-DQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 86 ~a~~~~~~~~-~-~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.++...+... . .-+|+|.|..|+|||..++.+.+++
T Consensus 91 ~~l~~~l~~~~~~~n~~~l~GppgtGKt~~a~ala~~~ 128 (267)
T 1u0j_A 91 SVFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHTV 128 (267)
T ss_dssp HHHHHHHTTCSTTCCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred HHHHHHHhCCCCCCcEEEEECCCCCCHHHHHHHHHhhh
Confidence 3344444443 2 3489999999999999999999864
No 435
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=87.96 E-value=0.24 Score=36.09 Aligned_cols=24 Identities=25% Similarity=0.387 Sum_probs=19.6
Q ss_pred CCCeEEEecCCCCCchhHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVV 118 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il 118 (186)
.+.=.|++.|.+|+|||+..+.+.
T Consensus 16 ~~~~~i~v~G~~~~GKssli~~l~ 39 (183)
T 1moz_A 16 NKELRILILGLDGAGKTTILYRLQ 39 (183)
T ss_dssp SSCEEEEEEEETTSSHHHHHHHTC
T ss_pred CCccEEEEECCCCCCHHHHHHHHh
Confidence 345579999999999999876665
No 436
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=87.94 E-value=0.29 Score=36.52 Aligned_cols=21 Identities=29% Similarity=0.241 Sum_probs=18.0
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 10 ki~v~G~~~~GKSsli~~l~~ 30 (203)
T 1zbd_A 10 KILIIGNSSVGKTSFLFRYAD 30 (203)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 589999999999998877654
No 437
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=87.92 E-value=0.27 Score=36.86 Aligned_cols=22 Identities=27% Similarity=0.303 Sum_probs=19.1
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
=.|++.|.+|+|||+..+.++.
T Consensus 25 ~ki~vvG~~~~GKSsli~~l~~ 46 (201)
T 3oes_A 25 RKVVILGYRCVGKTSLAHQFVE 46 (201)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3599999999999999887775
No 438
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=87.90 E-value=0.18 Score=49.45 Aligned_cols=28 Identities=25% Similarity=0.485 Sum_probs=25.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+..+.+.|.|+||||||+..+.+.+++.
T Consensus 1057 ~~Ge~v~ivG~sGsGKSTl~~~l~g~~~ 1084 (1284)
T 3g5u_A 1057 KKGQTLALVGSSGCGKSTVVQLLERFYD 1084 (1284)
T ss_dssp CSSSEEEEECSSSTTHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhcCcC
Confidence 4678999999999999999999999765
No 439
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=87.87 E-value=0.27 Score=37.33 Aligned_cols=21 Identities=29% Similarity=0.379 Sum_probs=18.8
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 28 ki~lvG~~~vGKSsLi~~l~~ 48 (201)
T 2ew1_A 28 KIVLIGNAGVGKTCLVRRFTQ 48 (201)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHh
Confidence 589999999999999888765
No 440
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=87.83 E-value=0.28 Score=36.41 Aligned_cols=22 Identities=23% Similarity=0.144 Sum_probs=19.1
Q ss_pred EEEecCCCCCchhHHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~ 120 (186)
.|++.|.+|+|||+..+.++.-
T Consensus 25 ki~v~G~~~~GKSsli~~l~~~ 46 (191)
T 3dz8_A 25 KLLIIGNSSVGKTSFLFRYADD 46 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHhcC
Confidence 5999999999999998887753
No 441
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=87.83 E-value=0.32 Score=35.67 Aligned_cols=21 Identities=29% Similarity=0.249 Sum_probs=17.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.+..
T Consensus 16 ki~vvG~~~~GKssL~~~l~~ 36 (198)
T 3t1o_A 16 KIVYYGPGLSGKTTNLKWIYS 36 (198)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 589999999999999765544
No 442
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=87.83 E-value=0.41 Score=41.33 Aligned_cols=27 Identities=30% Similarity=0.314 Sum_probs=24.6
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+.+++.|.+|+|||+.+..+...++
T Consensus 202 ~G~liiI~G~pG~GKTtl~l~ia~~~~ 228 (454)
T 2r6a_A 202 RSDLIIVAARPSVGKTAFALNIAQNVA 228 (454)
T ss_dssp TTCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 667899999999999999999998877
No 443
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=87.82 E-value=0.37 Score=40.71 Aligned_cols=27 Identities=22% Similarity=0.235 Sum_probs=24.1
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
....+.|.|++|+|||+.+..+...+.
T Consensus 60 ~G~i~~I~GppGsGKSTLal~la~~~~ 86 (356)
T 3hr8_A 60 RGRIVEIFGQESSGKTTLALHAIAEAQ 86 (356)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHH
Confidence 567899999999999999999988766
No 444
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=87.57 E-value=0.37 Score=40.38 Aligned_cols=27 Identities=30% Similarity=0.273 Sum_probs=23.6
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
....+++.|++|+|||+.+..+.....
T Consensus 60 ~G~iv~I~G~pGsGKTtLal~la~~~~ 86 (349)
T 2zr9_A 60 RGRVIEIYGPESSGKTTVALHAVANAQ 86 (349)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 567899999999999999998887665
No 445
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=87.54 E-value=0.29 Score=36.67 Aligned_cols=21 Identities=24% Similarity=0.273 Sum_probs=18.3
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 10 ki~v~G~~~~GKSsli~~l~~ 30 (206)
T 2bcg_Y 10 KLLLIGNSGVGKSCLLLRFSD 30 (206)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 589999999999998877764
No 446
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=87.45 E-value=0.82 Score=40.41 Aligned_cols=26 Identities=35% Similarity=0.617 Sum_probs=23.2
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...|++.|..|+|||+++..+..++.
T Consensus 101 ~~vI~ivG~~GvGKTTl~~kLA~~l~ 126 (504)
T 2j37_W 101 QNVIMFVGLQGSGKTTTCSKLAYYYQ 126 (504)
T ss_dssp -EEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 45799999999999999999999887
No 447
>2fz4_A DNA repair protein RAD25; RECA-like domain, DNA damage recognition domain, DNA binding; HET: DNA; 2.40A {Archaeoglobus fulgidus} SCOP: c.37.1.19
Probab=87.41 E-value=0.38 Score=37.73 Aligned_cols=33 Identities=21% Similarity=0.113 Sum_probs=23.4
Q ss_pred HHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 86 SAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 86 ~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.|+..+... ..++++|++|+|||..+..++..+
T Consensus 100 ~ai~~~~~~---~~~ll~~~tG~GKT~~a~~~~~~~ 132 (237)
T 2fz4_A 100 KALERWLVD---KRGCIVLPTGSGKTHVAMAAINEL 132 (237)
T ss_dssp HHHHHHTTT---SEEEEEESSSTTHHHHHHHHHHHS
T ss_pred HHHHHHHhC---CCEEEEeCCCCCHHHHHHHHHHHc
Confidence 455544433 348899999999999987776643
No 448
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=87.31 E-value=0.36 Score=36.18 Aligned_cols=21 Identities=33% Similarity=0.409 Sum_probs=18.4
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+....++.
T Consensus 22 ~i~v~G~~~~GKSsli~~l~~ 42 (213)
T 3cph_A 22 KILLIGDSGVGKSCLLVRFVE 42 (213)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 589999999999999887764
No 449
>1zcb_A G alpha I/13; GTP-binding, lipoprotein, membrane, transducer, signaling PR; HET: GDP; 2.00A {Mus musculus} SCOP: a.66.1.1 c.37.1.8 PDB: 3ab3_A* 3cx8_A* 3cx7_A* 3cx6_A* 1zca_A*
Probab=87.28 E-value=0.38 Score=40.62 Aligned_cols=23 Identities=22% Similarity=0.242 Sum_probs=20.9
Q ss_pred CCCeEEEecCCCCCchhHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMV 117 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~i 117 (186)
++...|++.|-+|||||+.+|.+
T Consensus 31 ~~~~killlG~~~SGKST~~kq~ 53 (362)
T 1zcb_A 31 ARLVKILLLGAGESGKSTFLKQM 53 (362)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHH
T ss_pred cCccEEEEECCCCCcHHHHHHHH
Confidence 45678999999999999999998
No 450
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=87.28 E-value=0.3 Score=36.79 Aligned_cols=22 Identities=23% Similarity=0.329 Sum_probs=19.0
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
-.|++.|.+|+|||+..+.++.
T Consensus 26 ~ki~vvG~~~~GKSsli~~l~~ 47 (207)
T 2fv8_A 26 KKLVVVGDGACGKTCLLIVFSK 47 (207)
T ss_dssp EEEEEEECTTSSHHHHHHHHHH
T ss_pred cEEEEECcCCCCHHHHHHHHhc
Confidence 4699999999999999877765
No 451
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=87.04 E-value=0.3 Score=36.66 Aligned_cols=21 Identities=24% Similarity=0.389 Sum_probs=18.4
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 27 ki~v~G~~~~GKSsLi~~l~~ 47 (200)
T 2o52_A 27 KFLVIGSAGTGKSCLLHQFIE 47 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHHh
Confidence 589999999999999887763
No 452
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=87.04 E-value=0.29 Score=36.18 Aligned_cols=22 Identities=23% Similarity=0.268 Sum_probs=18.7
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
=.|++.|.+|+|||+..+.+..
T Consensus 17 ~ki~ivG~~~vGKSsL~~~l~~ 38 (181)
T 1fzq_A 17 VRILLLGLDNAGKTTLLKQLAS 38 (181)
T ss_dssp EEEEEEESTTSSHHHHHHHHCC
T ss_pred eEEEEECCCCCCHHHHHHHHhc
Confidence 3699999999999999877654
No 453
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens}
Probab=87.00 E-value=0.36 Score=35.96 Aligned_cols=22 Identities=18% Similarity=0.210 Sum_probs=18.6
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
=.|++.|.+|+|||+..+.++.
T Consensus 21 ~ki~~~G~~~~GKssl~~~l~~ 42 (201)
T 2q3h_A 21 VKCVLVGDGAVGKTSLVVSYTT 42 (201)
T ss_dssp EEEEEECSTTSSHHHHHHHHHC
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 3599999999999998877764
No 454
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=86.92 E-value=0.34 Score=36.07 Aligned_cols=21 Identities=29% Similarity=0.392 Sum_probs=18.0
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 28 ki~vvG~~~~GKSsLi~~l~~ 48 (192)
T 2il1_A 28 QVIIIGSRGVGKTSLMERFTD 48 (192)
T ss_dssp EEEEECSTTSSHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 489999999999998877653
No 455
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=86.88 E-value=0.35 Score=39.81 Aligned_cols=28 Identities=29% Similarity=0.260 Sum_probs=23.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.+++.|++|+|||+.+..+.....
T Consensus 105 ~~G~i~~i~G~~GsGKT~la~~la~~~~ 132 (324)
T 2z43_A 105 ETRTMTEFFGEFGSGKTQLCHQLSVNVQ 132 (324)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred CCCcEEEEECCCCCCHhHHHHHHHHHHh
Confidence 3567899999999999999988876543
No 456
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=86.84 E-value=0.27 Score=36.32 Aligned_cols=22 Identities=27% Similarity=0.305 Sum_probs=18.7
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
-.|++.|.+|+|||+..+.++.
T Consensus 18 ~ki~v~G~~~~GKSsl~~~l~~ 39 (199)
T 4bas_A 18 LQVVMCGLDNSGKTTIINQVKP 39 (199)
T ss_dssp EEEEEECCTTSCHHHHHHHHSC
T ss_pred cEEEEECCCCCCHHHHHHHHhc
Confidence 4699999999999998877654
No 457
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8
Probab=86.84 E-value=0.33 Score=36.85 Aligned_cols=21 Identities=33% Similarity=0.422 Sum_probs=18.7
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.+..
T Consensus 30 ki~vvG~~~vGKSsLi~~l~~ 50 (205)
T 1gwn_A 30 KIVVVGDSQCGKTALLHVFAK 50 (205)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 599999999999999887765
No 458
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=86.74 E-value=0.15 Score=43.13 Aligned_cols=23 Identities=22% Similarity=0.437 Sum_probs=19.7
Q ss_pred EEEecCCCCCchhHHHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l 121 (186)
.++|.|++|||||+..+.|.-.+
T Consensus 62 ~~~lvG~NGaGKStLl~aI~~l~ 84 (415)
T 4aby_A 62 FCAFTGETGAGKSIIVDALGLLL 84 (415)
T ss_dssp EEEEEESHHHHHHHHTHHHHHHT
T ss_pred cEEEECCCCCCHHHHHHHHHHHh
Confidence 89999999999999998875443
No 459
>2atx_A Small GTP binding protein TC10; GTPase, P-loop, alpha-beta, hydrolase; HET: GNP; 2.65A {Homo sapiens} SCOP: c.37.1.8
Probab=86.67 E-value=0.35 Score=35.79 Aligned_cols=21 Identities=24% Similarity=0.210 Sum_probs=18.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||...+.++.
T Consensus 20 ki~v~G~~~~GKssli~~l~~ 40 (194)
T 2atx_A 20 KCVVVGDGAVGKTCLLMSYAN 40 (194)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 589999999999998877775
No 460
>3b6e_A Interferon-induced helicase C domain-containing P; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, S genomics; 1.60A {Homo sapiens}
Probab=86.64 E-value=0.43 Score=35.79 Aligned_cols=34 Identities=24% Similarity=0.184 Sum_probs=24.2
Q ss_pred HHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 86 SAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 86 ~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+|+..++. .+.+++.+++|+|||..+-.++..+.
T Consensus 40 ~~i~~~~~---~~~~li~~~tGsGKT~~~~~~~~~~~ 73 (216)
T 3b6e_A 40 EVAQPALE---GKNIIICLPTGSGKTRVAVYIAKDHL 73 (216)
T ss_dssp HHHHHHHT---TCCEEEECSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc---CCCEEEEcCCCCCHHHHHHHHHHHHH
Confidence 44444443 35699999999999998877666543
No 461
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.56 E-value=0.52 Score=40.81 Aligned_cols=28 Identities=21% Similarity=0.324 Sum_probs=24.3
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+..|++.|.+|+|||..++.+...+-
T Consensus 204 ~~prGiLL~GPPGtGKT~lakAiA~~~~ 231 (428)
T 4b4t_K 204 DPPRGVLLYGPPGTGKTMLVKAVANSTK 231 (428)
T ss_dssp CCCCEEEEESCTTTTHHHHHHHHHHHHT
T ss_pred CCCceEEEECCCCCCHHHHHHHHHHHhC
Confidence 3566899999999999999999988764
No 462
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=86.54 E-value=0.39 Score=36.29 Aligned_cols=21 Identities=29% Similarity=0.306 Sum_probs=17.9
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 27 ki~vvG~~~~GKSsLi~~l~~ 47 (217)
T 2f7s_A 27 KLLALGDSGVGKTTFLYRYTD 47 (217)
T ss_dssp EEEEESCTTSSHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHhc
Confidence 589999999999998777653
No 463
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=86.49 E-value=0.4 Score=39.19 Aligned_cols=26 Identities=27% Similarity=0.222 Sum_probs=22.0
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
...+.+++.|++|+|||+.+..+...
T Consensus 96 ~~g~i~~i~G~~gsGKT~la~~la~~ 121 (322)
T 2i1q_A 96 ESQSVTEFAGVFGSGKTQIMHQSCVN 121 (322)
T ss_dssp ETTEEEEEEESTTSSHHHHHHHHHHH
T ss_pred cCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 36678999999999999998877754
No 464
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=86.47 E-value=0.42 Score=35.75 Aligned_cols=21 Identities=29% Similarity=0.510 Sum_probs=18.3
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||...+.++.
T Consensus 8 kv~lvG~~~vGKSsL~~~~~~ 28 (192)
T 2cjw_A 8 RVVLIGEQGVGKSTLANIFAG 28 (192)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 589999999999999887764
No 465
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=86.44 E-value=0.3 Score=35.83 Aligned_cols=22 Identities=23% Similarity=0.300 Sum_probs=18.9
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
=.|++.|.+|+|||+..+.++.
T Consensus 22 ~~i~v~G~~~~GKSsli~~l~~ 43 (181)
T 2h17_A 22 HKVIIVGLDNAGKTTILYQFSM 43 (181)
T ss_dssp EEEEEEEETTSSHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHhc
Confidence 4699999999999999887764
No 466
>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, DNA binding, DNA repair, mismatch recognition; HET: DNA ADP; 2.10A {Escherichia coli} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1wbb_A* 1e3m_A* 1oh5_A* 1oh6_A* 1oh7_A* 1oh8_A* 1w7a_A* 2wtu_A* 1wbd_A* 1ng9_A* 3k0s_A*
Probab=86.43 E-value=0.41 Score=44.70 Aligned_cols=26 Identities=15% Similarity=0.319 Sum_probs=22.6
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
..+.++|+|++|||||+..|.+....
T Consensus 606 ~g~i~~ItGpNGsGKSTlLr~iagl~ 631 (800)
T 1wb9_A 606 QRRMLIITGPNMGGKSTYMRQTALIA 631 (800)
T ss_dssp SSCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCChHHHHHHHHHHH
Confidence 55789999999999999999987753
No 467
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=86.40 E-value=0.39 Score=37.91 Aligned_cols=24 Identities=21% Similarity=0.500 Sum_probs=20.4
Q ss_pred CCeEEEecCCCCCchhHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
..-.|++.|.+|+|||+....++.
T Consensus 20 ~~l~I~lvG~~g~GKSSlin~l~~ 43 (247)
T 3lxw_A 20 STRRLILVGRTGAGKSATGNSILG 43 (247)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHT
T ss_pred CceEEEEECCCCCcHHHHHHHHhC
Confidence 445699999999999999888775
No 468
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=86.40 E-value=0.42 Score=36.89 Aligned_cols=20 Identities=30% Similarity=0.523 Sum_probs=16.4
Q ss_pred EEEecCCCCCchhHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVV 118 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il 118 (186)
.++++|..|||||..+..++
T Consensus 7 i~l~tG~pGsGKT~~a~~~~ 26 (199)
T 2r2a_A 7 ICLITGTPGSGKTLKMVSMM 26 (199)
T ss_dssp EEEEECCTTSSHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHH
Confidence 46899999999999875543
No 469
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=86.34 E-value=0.31 Score=36.66 Aligned_cols=20 Identities=35% Similarity=0.513 Sum_probs=17.5
Q ss_pred EEEecCCCCCchhHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVV 118 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il 118 (186)
.|++.|.+|+|||+..+.+.
T Consensus 25 ki~vvG~~~vGKSsLi~~l~ 44 (195)
T 3cbq_A 25 KVMLVGESGVGKSTLAGTFG 44 (195)
T ss_dssp EEEEECSTTSSHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 58999999999999987764
No 470
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=86.24 E-value=0.33 Score=37.32 Aligned_cols=22 Identities=32% Similarity=0.484 Sum_probs=18.7
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
=.|++.|.+|+|||+....++.
T Consensus 30 ~kI~vvG~~~vGKSsLin~l~~ 51 (228)
T 2qu8_A 30 KTIILSGAPNVGKSSFMNIVSR 51 (228)
T ss_dssp EEEEEECSTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHhC
Confidence 4699999999999998877654
No 471
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=86.21 E-value=0.23 Score=36.26 Aligned_cols=21 Identities=29% Similarity=0.329 Sum_probs=9.2
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.+..
T Consensus 10 ki~v~G~~~~GKssl~~~l~~ 30 (183)
T 2fu5_C 10 KLLLIGDSGVGKTCVLFRFSE 30 (183)
T ss_dssp EEEEECCCCC-----------
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 489999999999999877654
No 472
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A*
Probab=86.18 E-value=0.38 Score=40.49 Aligned_cols=24 Identities=21% Similarity=0.454 Sum_probs=19.1
Q ss_pred EEEecCCCCCchhHHHHHHHHHHh
Q psy18111 99 CIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+|+|++|||||+....|.--+.
T Consensus 25 ~~~i~G~NGaGKTTll~ai~~al~ 48 (365)
T 3qf7_A 25 ITVVEGPNGAGKSSLFEAISFALF 48 (365)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHhc
Confidence 567899999999999866664444
No 473
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ...
Probab=86.11 E-value=0.39 Score=36.00 Aligned_cols=21 Identities=19% Similarity=0.316 Sum_probs=18.3
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.+..
T Consensus 27 ki~vvG~~~~GKSsli~~l~~ 47 (201)
T 2gco_A 27 KLVIVGDGACGKTCLLIVFSK 47 (201)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 599999999999998877665
No 474
>1sky_E F1-ATPase, F1-ATP synthase; F1FO ATP synthase, alpha3BETA3 SUBC F1-ATPase, hydrolase; 3.20A {Bacillus SP} SCOP: a.69.1.1 b.49.1.1 c.37.1.11
Probab=86.04 E-value=0.61 Score=40.98 Aligned_cols=42 Identities=21% Similarity=0.130 Sum_probs=34.6
Q ss_pred HHhHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 81 FAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 81 ~~~a~~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+...-++...|..-.+.|.++|.|.+|.|||+.++.++....
T Consensus 135 l~TGir~ID~L~pi~kGq~~~i~G~sGvGKTtL~~~l~~~~~ 176 (473)
T 1sky_E 135 LETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELIHNIA 176 (473)
T ss_dssp ECCSCHHHHHHSCEETTCEEEEECCSSSCHHHHHHHHHHHHH
T ss_pred ccccchHHHHHhhhccCCEEEEECCCCCCccHHHHHHHhhhh
Confidence 344445677777778999999999999999999999988766
No 475
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=86.04 E-value=0.36 Score=36.69 Aligned_cols=21 Identities=24% Similarity=0.450 Sum_probs=18.5
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 36 ki~vvG~~~vGKSsli~~l~~ 56 (214)
T 2j1l_A 36 KVVLVGDGGCGKTSLLMVFAD 56 (214)
T ss_dssp EEEEEECTTSSHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 599999999999999887764
No 476
>1e9r_A Conjugal transfer protein TRWB; coupling protein, bacterial conjugation, F1-ATPase-like quaternary structure, ring helicases; 2.4A {Escherichia coli} SCOP: c.37.1.11 PDB: 1e9s_A 1gki_A* 1gl7_A* 1gl6_A*
Probab=86.02 E-value=0.36 Score=41.11 Aligned_cols=27 Identities=26% Similarity=0.448 Sum_probs=23.6
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
.++.+++.|.+|||||+..+.++..+.
T Consensus 52 ~~~h~~i~G~tGsGKs~~~~~li~~~~ 78 (437)
T 1e9r_A 52 EPRHLLVNGATGTGKSVLLRELAYTGL 78 (437)
T ss_dssp GGGCEEEEECTTSSHHHHHHHHHHHHH
T ss_pred CcceEEEECCCCCCHHHHHHHHHHHHH
Confidence 467799999999999999888888776
No 477
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=85.91 E-value=0.43 Score=41.57 Aligned_cols=26 Identities=27% Similarity=0.427 Sum_probs=22.9
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...|++.|.+|+|||+.++.+-+.+-
T Consensus 50 ~~~iLl~GppGtGKT~lar~lA~~l~ 75 (444)
T 1g41_A 50 PKNILMIGPTGVGKTEIARRLAKLAN 75 (444)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTT
T ss_pred CceEEEEcCCCCCHHHHHHHHHHHcC
Confidence 45799999999999999999988764
No 478
>3l0o_A Transcription termination factor RHO; helicase, RHO factor, RNA capture mechanism, ATP-binding, hydrolase, nucleotide-binding, RN binding; 2.35A {Thermotoga maritima}
Probab=85.86 E-value=0.94 Score=39.18 Aligned_cols=43 Identities=14% Similarity=0.017 Sum_probs=37.8
Q ss_pred HHHhHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 80 IFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 80 i~~~a~~a~~~~~~~~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+..+|.-.|.--.+.|.+.|.|.+|.|||+.+..|.+...
T Consensus 158 ~~~tGiraID~l~PigrGQR~lIfg~~g~GKT~Ll~~Ia~~i~ 200 (427)
T 3l0o_A 158 PKIYSTRLIDLFAPIGKGQRGMIVAPPKAGKTTILKEIANGIA 200 (427)
T ss_dssp TTCHHHHHHHHHSCCBTTCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred chhccchhhhhcccccCCceEEEecCCCCChhHHHHHHHHHHh
Confidence 4567778888888889999999999999999999999998765
No 479
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=85.81 E-value=0.41 Score=36.01 Aligned_cols=21 Identities=19% Similarity=0.300 Sum_probs=18.3
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 31 ki~vvG~~~vGKSsli~~l~~ 51 (201)
T 2hup_A 31 KLVLVGDASVGKTCVVQRFKT 51 (201)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHhh
Confidence 499999999999999887754
No 480
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=85.80 E-value=0.47 Score=36.14 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=18.6
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||...+.++.
T Consensus 29 ki~vvG~~~vGKSsL~~~l~~ 49 (214)
T 3q3j_B 29 KLVLVGDVQCGKTAMLQVLAK 49 (214)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHhc
Confidence 599999999999998887765
No 481
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae}
Probab=85.73 E-value=0.48 Score=36.18 Aligned_cols=21 Identities=33% Similarity=0.469 Sum_probs=18.3
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 15 ki~v~G~~~vGKSsli~~l~~ 35 (223)
T 3cpj_B 15 KIVLIGDSGVGKSNLLSRFTK 35 (223)
T ss_dssp EEEEESCTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHhc
Confidence 589999999999998877765
No 482
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=85.71 E-value=0.42 Score=39.25 Aligned_cols=22 Identities=23% Similarity=0.490 Sum_probs=18.9
Q ss_pred EEEecCCCCCchhHHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~~ 120 (186)
..+|.|++|||||+....+.-.
T Consensus 26 ~~~i~G~NGsGKS~ll~ai~~l 47 (322)
T 1e69_A 26 VTAIVGPNGSGKSNIIDAIKWV 47 (322)
T ss_dssp EEEEECCTTTCSTHHHHHHHHT
T ss_pred cEEEECCCCCcHHHHHHHHHHH
Confidence 7899999999999998886643
No 483
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=85.69 E-value=0.39 Score=36.73 Aligned_cols=20 Identities=35% Similarity=0.577 Sum_probs=17.8
Q ss_pred EEecCCCCCchhHHHHHHHH
Q psy18111 100 IIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 100 IilsGeSGsGKt~~~k~il~ 119 (186)
|+++|-+|||||+.+..+..
T Consensus 2 ilV~Gg~~SGKS~~A~~la~ 21 (180)
T 1c9k_A 2 ILVTGGARSGKSRHAEALIG 21 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHC
T ss_pred EEEECCCCCcHHHHHHHHHh
Confidence 78999999999999988764
No 484
>2gxq_A Heat resistant RNA dependent ATPase; RNA helicase, atomic resolution, AMP complex, ribosome biogenesis, thermophilic, hydrolase; HET: AMP; 1.20A {Thermus thermophilus HB27} PDB: 2gxs_A* 2gxu_A 3mwj_A 3mwk_A* 3mwl_A* 3nbf_A* 3nej_A
Probab=85.64 E-value=0.73 Score=34.42 Aligned_cols=25 Identities=28% Similarity=0.285 Sum_probs=18.4
Q ss_pred eEEEecCCCCCchhHHH-HHHHHHHh
Q psy18111 98 QCIIVSGESGSGKTQAA-SMVVYFIA 122 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~-k~il~~l~ 122 (186)
+.+++.+++|+|||... -.+++.+.
T Consensus 39 ~~~li~~~TGsGKT~~~~~~~~~~l~ 64 (207)
T 2gxq_A 39 KDLIGQARTGTGKTLAFALPIAERLA 64 (207)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHCC
T ss_pred CCEEEECCCCChHHHHHHHHHHHHHh
Confidence 45999999999999874 44455443
No 485
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=85.63 E-value=0.88 Score=38.39 Aligned_cols=36 Identities=25% Similarity=0.373 Sum_probs=25.3
Q ss_pred hHHHhHHHHHHHHHhhCCCeEEEecCCCCCchhHHH
Q psy18111 79 HIFAIAGSAYRWLRDRSEDQCIIVSGESGSGKTQAA 114 (186)
Q Consensus 79 Hi~~~a~~a~~~~~~~~~~Q~IilsGeSGsGKt~~~ 114 (186)
.||...-...-.-...+.|-||+..|.+|||||.+.
T Consensus 75 ~vy~~~~~~lv~~~l~G~n~tifAYGqTGSGKTyTm 110 (354)
T 3gbj_A 75 IVFKCLGENILQNAFDGYNACIFAYGQTGSGKSYTM 110 (354)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEECTTSSHHHHH
T ss_pred HHHHHhhHHHHHHHhCCceeEEEeeCCCCCCCceEE
Confidence 355444332223334688999999999999999986
No 486
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.63 E-value=0.63 Score=40.43 Aligned_cols=28 Identities=29% Similarity=0.402 Sum_probs=24.4
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+-.|+|.|.+|+|||..++.+...+-
T Consensus 213 ~~prGvLL~GPPGtGKTllAkAiA~e~~ 240 (437)
T 4b4t_L 213 KPPKGVLLYGPPGTGKTLLAKAVAATIG 240 (437)
T ss_dssp CCCCEEEEESCTTSSHHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCCCcHHHHHHHHHHHhC
Confidence 3567899999999999999999988765
No 487
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=85.62 E-value=0.69 Score=35.44 Aligned_cols=25 Identities=16% Similarity=0.104 Sum_probs=19.0
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYF 120 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~ 120 (186)
..+-+++.|..|||||+.+-.+.+-
T Consensus 7 ~g~i~v~~G~mgsGKTT~ll~~a~r 31 (191)
T 1xx6_A 7 HGWVEVIVGPMYSGKSEELIRRIRR 31 (191)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCcHHHHHHHHHHH
Confidence 4578999999999999765544443
No 488
>2j0v_A RAC-like GTP-binding protein ARAC7; nucleotide-binding protein, ROP9, atrac7, membrane, palmitate, RHO GTPase; HET: GDP; 1.78A {Arabidopsis thaliana}
Probab=85.62 E-value=0.42 Score=35.92 Aligned_cols=21 Identities=19% Similarity=0.156 Sum_probs=18.2
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il~ 119 (186)
.|++.|.+|+|||+..+.++.
T Consensus 11 ki~i~G~~~~GKTsli~~l~~ 31 (212)
T 2j0v_A 11 KCVTVGDGAVGKTCMLICYTS 31 (212)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 589999999999999877664
No 489
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A*
Probab=85.55 E-value=0.53 Score=35.46 Aligned_cols=24 Identities=21% Similarity=0.163 Sum_probs=19.2
Q ss_pred CCeEEEecCCCCCchhHHHHHHHH
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~ 119 (186)
+.=.|++.|.+|+|||+..+.++.
T Consensus 29 ~~~ki~vvG~~~~GKSsLi~~l~~ 52 (204)
T 4gzl_A 29 QAIKCVVVGDGAVGKTCLLISYTT 52 (204)
T ss_dssp -CEEEEEEESTTSSHHHHHHHHHH
T ss_pred CeEEEEEECcCCCCHHHHHHHHHh
Confidence 344699999999999998877664
No 490
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A
Probab=85.51 E-value=0.87 Score=34.56 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=22.2
Q ss_pred HHHHHHHhhCCCeEEEecCCCCCchhHH-HHHHHHHHh
Q psy18111 86 SAYRWLRDRSEDQCIIVSGESGSGKTQA-ASMVVYFIA 122 (186)
Q Consensus 86 ~a~~~~~~~~~~Q~IilsGeSGsGKt~~-~k~il~~l~ 122 (186)
+|+..+... +.+++.+++|+|||.. .-.+++.+.
T Consensus 43 ~~i~~~~~~---~~~lv~~pTGsGKT~~~~~~~l~~l~ 77 (224)
T 1qde_A 43 RAIMPIIEG---HDVLAQAQSGTGKTGTFSIAALQRID 77 (224)
T ss_dssp HHHHHHHTT---CCEEEECCTTSSHHHHHHHHHHHHCC
T ss_pred HHHHHHhcC---CCEEEECCCCCcHHHHHHHHHHHHHh
Confidence 444444433 4499999999999987 444555443
No 491
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=85.50 E-value=0.32 Score=38.86 Aligned_cols=20 Identities=35% Similarity=0.581 Sum_probs=17.5
Q ss_pred EEEecCCCCCchhHHHHHHH
Q psy18111 99 CIIVSGESGSGKTQAASMVV 118 (186)
Q Consensus 99 ~IilsGeSGsGKt~~~k~il 118 (186)
.|++.|++|+|||+....++
T Consensus 10 ~I~vvG~~g~GKSTLin~L~ 29 (274)
T 3t5d_A 10 TLMVVGESGLGKSTLINSLF 29 (274)
T ss_dssp EEEEEECTTSSHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 59999999999999987754
No 492
>1ewq_A DNA mismatch repair protein MUTS; multiple domains of protein, mostly mixed alpha-beta structures, one domain is entirely helical; HET: DNA; 2.20A {Thermus aquaticus} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1nne_A* 1fw6_A* 1ewr_A*
Probab=85.47 E-value=0.46 Score=44.12 Aligned_cols=25 Identities=12% Similarity=0.303 Sum_probs=22.2
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHH
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFI 121 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l 121 (186)
.+.++|+|.+|||||+..|.+....
T Consensus 576 g~i~~I~GpNGsGKSTlLr~iagl~ 600 (765)
T 1ewq_A 576 HELVLITGPNMAGKSTFLRQTALIA 600 (765)
T ss_dssp SCEEEEESCSSSSHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCChHHHHHHHHhhh
Confidence 5789999999999999999988754
No 493
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=85.47 E-value=0.59 Score=34.07 Aligned_cols=26 Identities=19% Similarity=0.360 Sum_probs=20.3
Q ss_pred CeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 97 DQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 97 ~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
+...+|.|+.|||||+....|.--|.
T Consensus 23 ~g~~~I~G~NGsGKStil~Ai~~~l~ 48 (149)
T 1f2t_A 23 EGINLIIGQNGSGKSSLLDAILVGLY 48 (149)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHc
Confidence 34678999999999999877665443
No 494
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=85.44 E-value=0.65 Score=39.10 Aligned_cols=27 Identities=22% Similarity=0.231 Sum_probs=23.6
Q ss_pred CCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 96 EDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 96 ~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+.+++.|++|+|||+.+..+...++
T Consensus 62 ~G~ii~I~G~pGsGKTtLal~la~~~~ 88 (356)
T 1u94_A 62 MGRIVEIYGPESSGKTTLTLQVIAAAQ 88 (356)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 567899999999999999988887665
No 495
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=85.32 E-value=0.88 Score=38.24 Aligned_cols=22 Identities=18% Similarity=0.290 Sum_probs=19.7
Q ss_pred hhCCCeEEEecCCCCCchhHHH
Q psy18111 93 DRSEDQCIIVSGESGSGKTQAA 114 (186)
Q Consensus 93 ~~~~~Q~IilsGeSGsGKt~~~ 114 (186)
..+.|-||+..|.+|||||.+.
T Consensus 91 l~G~N~tifAYGQTGSGKTyTM 112 (344)
T 3dc4_A 91 LEGFQCTALAYGQTGTGKSYSM 112 (344)
T ss_dssp HHTCCEEEEEESSTTSSHHHHH
T ss_pred hCCCceEEEEecCCCCCCCeEE
Confidence 4578899999999999999986
No 496
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.21 E-value=0.68 Score=40.19 Aligned_cols=28 Identities=21% Similarity=0.243 Sum_probs=24.2
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
..+-.|+|.|.+|+|||..++.+...+-
T Consensus 213 ~~prGvLLyGPPGTGKTllAkAiA~e~~ 240 (434)
T 4b4t_M 213 RAPKGALMYGPPGTGKTLLARACAAQTN 240 (434)
T ss_dssp CCCCEEEEESCTTSSHHHHHHHHHHHHT
T ss_pred CCCCeeEEECcCCCCHHHHHHHHHHHhC
Confidence 3467899999999999999999988654
No 497
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=85.12 E-value=0.93 Score=37.77 Aligned_cols=22 Identities=27% Similarity=0.362 Sum_probs=19.7
Q ss_pred hhCCCeEEEecCCCCCchhHHH
Q psy18111 93 DRSEDQCIIVSGESGSGKTQAA 114 (186)
Q Consensus 93 ~~~~~Q~IilsGeSGsGKt~~~ 114 (186)
..+.|-+|+..|.+|||||.+.
T Consensus 74 l~G~n~tifAYGqTGSGKTyTm 95 (325)
T 1bg2_A 74 LEGYNGTIFAYGQTSSGKTHTM 95 (325)
T ss_dssp HTTCCEEEEEECSTTSSHHHHH
T ss_pred hCCCeEEEEEECCCCCCCceEe
Confidence 4578899999999999999986
No 498
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=85.02 E-value=0.75 Score=38.93 Aligned_cols=37 Identities=19% Similarity=0.136 Sum_probs=26.5
Q ss_pred chHHHh-HHHHHHHHHhhCCCeEEEecCCCCCchhHHH
Q psy18111 78 PHIFAI-AGSAYRWLRDRSEDQCIIVSGESGSGKTQAA 114 (186)
Q Consensus 78 PHi~~~-a~~a~~~~~~~~~~Q~IilsGeSGsGKt~~~ 114 (186)
-.||.- +.......+..+.+-+|+-.|.+|||||.+.
T Consensus 65 ~~Vy~~~~~plv~~~~~~G~n~tifAYGqTGSGKTyTM 102 (360)
T 1ry6_A 65 FTVYENTIKPLIIDLYENGCVCSCFAYGQTGSGKTYTM 102 (360)
T ss_dssp HHHHHHHTHHHHHHHHHHCCEEEEEEECCTTSSHHHHH
T ss_pred HHHHHHHhhhhhhhhccCCceeEEEeeCCCCCCCCEEE
Confidence 355652 3334445556677888999999999999876
No 499
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=84.99 E-value=0.33 Score=46.41 Aligned_cols=28 Identities=25% Similarity=0.296 Sum_probs=24.3
Q ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHh
Q psy18111 95 SEDQCIIVSGESGSGKTQAASMVVYFIA 122 (186)
Q Consensus 95 ~~~Q~IilsGeSGsGKt~~~k~il~~l~ 122 (186)
...+.+.|.|.+|||||+..|.+...+.
T Consensus 697 ~~GeivaIiGpNGSGKSTLLklLaGll~ 724 (986)
T 2iw3_A 697 SLSSRIAVIGPNGAGKSTLINVLTGELL 724 (986)
T ss_dssp ETTCEEEECSCCCHHHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 4667899999999999999999988654
No 500
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=84.97 E-value=0.59 Score=36.56 Aligned_cols=22 Identities=36% Similarity=0.463 Sum_probs=19.5
Q ss_pred eEEEecCCCCCchhHHHHHHHH
Q psy18111 98 QCIIVSGESGSGKTQAASMVVY 119 (186)
Q Consensus 98 Q~IilsGeSGsGKt~~~k~il~ 119 (186)
-+|.++|-.|||||+.++.+-+
T Consensus 10 ~~iglTGgigsGKStv~~~l~~ 31 (210)
T 4i1u_A 10 YAIGLTGGIGSGKTTVADLFAA 31 (210)
T ss_dssp CEEEEECCTTSCHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHH
Confidence 3689999999999999988766
Done!