BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18112
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P34092|MYOB_DICDI Myosin IB heavy chain OS=Dictyostelium discoideum GN=myoB PE=1 SV=2
Length = 1111
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHTCYTV 67
SRV YQ PGERNFHIFYQLL GA R ++ P + + Q CYTV
Sbjct: 187 SRVVYQNPGERNFHIFYQLLAGASAQEKRDYVLSSPESYYYLN-QSQCYTV 236
>sp|P34109|MYOD_DICDI Myosin ID heavy chain OS=Dictyostelium discoideum GN=myoD PE=1 SV=2
Length = 1109
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHTCYTV 67
SRV YQ GERNFHIFYQLL GA+ L + + P +F + CYTV
Sbjct: 186 SRVVYQTKGERNFHIFYQLLSGANQQLKSELRLDTPDKFNYLSAS-GCYTV 235
>sp|Q62774|MYO1A_RAT Unconventional myosin-Ia (Fragment) OS=Rattus norvegicus GN=Myo1a
PE=2 SV=1
Length = 842
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 26/38 (68%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMR 54
SRV Q GERNFHIFYQLL GAD LL+ + + E R
Sbjct: 178 SRVVKQLKGERNFHIFYQLLAGADTQLLKALKLEEDAR 215
>sp|O88329|MYO1A_MOUSE Unconventional myosin-Ia OS=Mus musculus GN=Myo1a PE=2 SV=2
Length = 1043
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAE 51
SRV Q GERNFHIFYQLL GAD LL+ + + E
Sbjct: 186 SRVVKQLKGERNFHIFYQLLAGADAQLLKALKLEE 220
>sp|P19706|MYSB_ACACA Myosin heavy chain IB OS=Acanthamoeba castellanii GN=MIB PE=1 SV=2
Length = 1147
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHTCYTV 67
SRVT+Q GER+FHIFYQLL GA + + + P F + Q CYTV
Sbjct: 184 SRVTFQTRGERSFHIFYQLLAGASDAEAQEMQLYAPENFNYLN-QSACYTV 233
>sp|P10568|MYO1A_BOVIN Unconventional myosin-Ia OS=Bos taurus GN=MYO1A PE=2 SV=1
Length = 1043
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNM 49
SRV Q GERNFHIFYQLL GAD LL+ + +
Sbjct: 186 SRVVKQLEGERNFHIFYQLLAGADAQLLKALKL 218
>sp|Q9UBC5|MYO1A_HUMAN Unconventional myosin-Ia OS=Homo sapiens GN=MYO1A PE=1 SV=1
Length = 1043
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNM 49
SR+ Q GERNFHIFYQLL GAD LL+ + +
Sbjct: 186 SRLVKQLKGERNFHIFYQLLAGADEQLLKALKL 218
>sp|Q9U1M8|MYOI_DICDI Myosin-I heavy chain OS=Dictyostelium discoideum GN=myoI PE=1 SV=1
Length = 2357
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRF 57
SR+++QA ERN+HIFYQLL GA L + + EP + +
Sbjct: 188 SRISHQASSERNYHIFYQLLAGASDELKEKLKLGEPEDYHY 228
>sp|P08799|MYS2_DICDI Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3
Length = 2116
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHTCYTVATTSVDTIF 76
SRV +Q+ ERN+HIFYQLL GA + +++A P F + Q C + S F
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLN-QSGCVDIKGVSDSEEF 324
Query: 77 PSSRRDYD 84
+R+ D
Sbjct: 325 KITRQAMD 332
>sp|P22467|MYOA_DICDI Myosin IA heavy chain OS=Dictyostelium discoideum GN=myoA PE=4 SV=2
Length = 994
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRF--GRLQHTCYTVATTSVDT 74
SRV Q GERNFHIFYQLL G+ + N+ P ++ + + C+T
Sbjct: 190 SRVINQTQGERNFHIFYQLLKGSSEEEKKTYNLLSPDQYHYLTRNASNGCFTADGIDDQI 249
Query: 75 IFPSSRRDYDPT--DEPLREE 93
F ++ DEPL++E
Sbjct: 250 GFKQTKNAMKVVGIDEPLQKE 270
>sp|Q9Y2K3|MYH15_HUMAN Myosin-15 OS=Homo sapiens GN=MYH15 PE=1 SV=5
Length = 1946
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 1 MSSYDIEMRIATGASMSRVTYQAPGERNFHIFYQLLVG-ADVHLLRVVNMAEPMRFRFGR 59
+SS DI++ + SRV +Q GERN+HIFYQ+L G ++H L +V+ A P F F
Sbjct: 271 LSSVDIDIYLL---EKSRVIFQQAGERNYHIFYQILSGQKELHDLLLVS-ANPSDFHFC- 325
Query: 60 LQHTCYTVATTSVD 73
+C V S+D
Sbjct: 326 ---SCGAVTVESLD 336
>sp|Q23979|MY61F_DROME Myosin-IB OS=Drosophila melanogaster GN=Myo61F PE=1 SV=3
Length = 1035
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPM 53
SRV Q GERNFHIFYQLL GAD LL+ + + +
Sbjct: 199 SRVVAQMGGERNFHIFYQLLAGADEALLQELRLERAL 235
>sp|Q5ZLA6|MYO1C_CHICK Unconventional myosin-Ic OS=Gallus gallus GN=MYO1C PE=2 SV=1
Length = 1028
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAE-PMRFRF 57
SRV +Q GERNFHIFYQLL G + LLR + + + P ++ +
Sbjct: 190 SRVVHQNHGERNFHIFYQLLEGGEEDLLRRLGLEKNPQQYHY 231
>sp|Q8N1T3|MYO1H_HUMAN Unconventional myosin-Ih OS=Homo sapiens GN=MYO1H PE=2 SV=2
Length = 1032
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMA-EPMRFRF 57
SRV YQ GERNFHIFYQLL G + L + + +P +++
Sbjct: 190 SRVVYQNEGERNFHIFYQLLAGGEEERLSYLGLERDPQLYKY 231
>sp|P05659|MYSN_ACACA Myosin-2 heavy chain, non muscle OS=Acanthamoeba castellanii PE=3
SV=1
Length = 1509
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGA-DVHLLRVVNMAEPMRFRFGRLQHTCYTVATTSVDTI 75
SRVT Q GERNFHIFYQ+L A L + + + +P + F Q+ CYTV
Sbjct: 266 SRVTAQGAGERNFHIFYQILSKAMPEELKQKLKLTKPEDYFFLN-QNACYTVDDMDDAKE 324
Query: 76 FPSSRRDYDPTDEPLREEDRI 96
F + +D + + EE+R+
Sbjct: 325 FDHMLKAFDILN--INEEERL 343
>sp|Q92002|MYO1C_LITCT Unconventional myosin-Ic OS=Lithobates catesbeiana GN=Myo1c PE=2
SV=1
Length = 1028
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLR 45
SRV +Q GERNFHIFYQLL G + LLR
Sbjct: 190 SRVVHQNHGERNFHIFYQLLEGGEEDLLR 218
>sp|Q23978|MY31D_DROME Myosin-IA OS=Drosophila melanogaster GN=Myo31DF PE=2 SV=1
Length = 1011
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLR 45
SRV Q PGERNFH FYQLL GA+ + LR
Sbjct: 187 SRVVQQQPGERNFHSFYQLLRGANDNELR 215
>sp|P47807|MYO1A_CHICK Unconventional myosin-Ia OS=Gallus gallus GN=MYO1A PE=1 SV=2
Length = 1045
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQH 62
SR+ GERNFHIFYQLL G LL+ + + P +G L H
Sbjct: 189 SRIVRHVKGERNFHIFYQLLAGGSAQLLQQLKL-RPDCSHYGYLNH 233
>sp|Q5ZMC2|MYO1G_CHICK Unconventional myosin-Ig OS=Gallus gallus GN=MYO1G PE=2 SV=1
Length = 1007
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNM 49
SRV Q PGERNFH FYQLL+GA LL +++
Sbjct: 189 SRVLQQQPGERNFHSFYQLLLGAPDALLASLHL 221
>sp|Q9D6A1|MYO1H_MOUSE Unconventional myosin-Ih OS=Mus musculus GN=Myo1h PE=2 SV=2
Length = 958
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMA-EPMRFRF 57
SRV YQ GERNFHIFYQLL G L + + +P +++
Sbjct: 190 SRVVYQNHGERNFHIFYQLLAGGGSERLASLGLERDPQLYKY 231
>sp|O94832|MYO1D_HUMAN Unconventional myosin-Id OS=Homo sapiens GN=MYO1D PE=1 SV=2
Length = 1006
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPM 53
SRV Q PGER+FH FYQLL G +LR +++ + +
Sbjct: 189 SRVIVQQPGERSFHSFYQLLQGGSEQMLRSLHLQKSL 225
>sp|Q27966|MYO1C_BOVIN Unconventional myosin-Ic OS=Bos taurus GN=MYO1C PE=1 SV=3
Length = 1063
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNM 49
SRV +Q GERNFHIFYQLL G + LR + +
Sbjct: 225 SRVVHQNHGERNFHIFYQLLEGGEEETLRRLGL 257
>sp|Q17R14|MYO1D_BOVIN Unconventional myosin-Id OS=Bos taurus GN=MYO1D PE=2 SV=1
Length = 1006
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPM 53
SRV Q PGER+FH FYQLL G +LR +++ + +
Sbjct: 189 SRVIVQQPGERSFHSFYQLLQGGSDQMLRSLHLQKSL 225
>sp|Q569U0|MYO19_XENLA Unconventional myosin-XIX OS=Xenopus laevis GN=myo19 PE=2 SV=1
Length = 971
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 7/35 (20%)
Query: 12 TGASM-------SRVTYQAPGERNFHIFYQLLVGA 39
TGAS+ +RV +QAP ERNFHIFYQ+ GA
Sbjct: 223 TGASIQTYLLEKTRVAHQAPLERNFHIFYQMFKGA 257
>sp|Q63355|MYO1C_RAT Unconventional myosin-Ic OS=Rattus norvegicus GN=Myo1c PE=2 SV=2
Length = 1044
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNM 49
SRV +Q GERNFH+FYQLL G + LR + +
Sbjct: 206 SRVVHQNHGERNFHVFYQLLEGGEEEALRRLGL 238
>sp|O00159|MYO1C_HUMAN Unconventional myosin-Ic OS=Homo sapiens GN=MYO1C PE=1 SV=4
Length = 1063
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLR 45
SRV +Q GERNFHIFYQLL G + LR
Sbjct: 225 SRVVHQNHGERNFHIFYQLLEGGEEETLR 253
>sp|Q9WTI7|MYO1C_MOUSE Unconventional myosin-Ic OS=Mus musculus GN=Myo1c PE=1 SV=2
Length = 1063
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNM 49
SRV +Q GERNFH+FYQLL G + LR + +
Sbjct: 225 SRVVHQNHGERNFHVFYQLLEGGEEETLRRLGL 257
>sp|Q05096|MYO1B_RAT Unconventional myosin-Ib OS=Rattus norvegicus GN=Myo1b PE=2 SV=1
Length = 1136
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNM 49
SRV Q GERNFH+FYQLL GA LL + +
Sbjct: 193 SRVVKQPRGERNFHVFYQLLSGASEELLHKLKL 225
>sp|Q9UKN7|MYO15_HUMAN Unconventional myosin-XV OS=Homo sapiens GN=MYO15A PE=1 SV=2
Length = 3530
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHTCYTVATTSVD 73
SR+ +QA ERN+HIFY+LL G L + ++ E + + C + D
Sbjct: 1397 SRIVFQAKNERNYHIFYELLAGLPAQLRQAFSLQEAETYYYLNQGGNCEIAGKSDAD 1453
>sp|P46735|MYO1B_MOUSE Unconventional myosin-Ib OS=Mus musculus GN=Myo1b PE=2 SV=3
Length = 1107
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 19/28 (67%), Positives = 20/28 (71%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLL 44
SRV Q GERNFH+FYQLL GA LL
Sbjct: 193 SRVVKQPRGERNFHVFYQLLSGASEELL 220
>sp|O43795|MYO1B_HUMAN Unconventional myosin-Ib OS=Homo sapiens GN=MYO1B PE=1 SV=3
Length = 1136
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 19/28 (67%), Positives = 20/28 (71%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLL 44
SRV Q GERNFH+FYQLL GA LL
Sbjct: 193 SRVVKQPRGERNFHVFYQLLSGASEELL 220
>sp|Q9QZZ4|MYO15_MOUSE Unconventional myosin-XV OS=Mus musculus GN=Myo15a PE=1 SV=2
Length = 3511
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHTCYTVATTSVD 73
SR+ +QA ERN+HIFY+LL G L + ++ E + + C + D
Sbjct: 1381 SRIVFQAKNERNYHIFYELLAGLPAQLRQAFSLQEAETYYYLNQGGNCEIAGKSDAD 1437
>sp|P10569|MYSC_ACACA Myosin IC heavy chain OS=Acanthamoeba castellanii GN=MIC PE=1 SV=1
Length = 1168
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 17/20 (85%), Positives = 17/20 (85%)
Query: 17 SRVTYQAPGERNFHIFYQLL 36
SRV YQ GERNFHIFYQLL
Sbjct: 180 SRVVYQTNGERNFHIFYQLL 199
>sp|Q86AC8|MYOG_DICDI Myosin-G heavy chain OS=Dictyostelium discoideum GN=myoG PE=3 SV=1
Length = 3446
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 17 SRVTYQAPGERNFHIFYQLLVG 38
+RVTYQ GERNFHIFYQ L G
Sbjct: 614 NRVTYQNKGERNFHIFYQFLKG 635
>sp|Q01989|MYS9_DROME Myosin heavy chain 95F OS=Drosophila melanogaster GN=jar PE=2 SV=4
Length = 1253
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHTCYTVATTSVDTIF 76
SR+ Q+ ERN+H+FY LL GA L +++ +P +R+ L A + +
Sbjct: 233 SRICTQSAEERNYHVFYMLLAGAPQQLRDKLSLGKPDDYRY--LSGCTQYFANAKTEQLI 290
Query: 77 PSSRRDYDPTDE-PLRE 92
P S++ + + PL++
Sbjct: 291 PGSQKSKNHQQKGPLKD 307
>sp|Q60LV4|MYO3_CAEBR Myosin-3 OS=Caenorhabditis briggsae GN=myo-3 PE=3 SV=1
Length = 1969
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHL 43
SRV QAPGER +HIFYQ++ G D L
Sbjct: 274 SRVVRQAPGERCYHIFYQIMSGNDASL 300
>sp|Q6PIF6|MYO7B_HUMAN Unconventional myosin-VIIb OS=Homo sapiens GN=MYO7B PE=2 SV=2
Length = 2116
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRF 57
SRV QAP ERN+HIFY +L+G +++++ P + +
Sbjct: 240 SRVCRQAPEERNYHIFYCMLMGVSAEDKQLLSLGTPSEYHY 280
>sp|Q9XXV8|MYOK_DICDI Myosin-K heavy chain OS=Dictyostelium discoideum GN=myoK PE=2 SV=1
Length = 858
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGAD 40
+RVT+Q ERNFHIFYQ+L G D
Sbjct: 326 TRVTFQQKNERNFHIFYQMLGGLD 349
>sp|Q5SYD0|MYO1D_MOUSE Unconventional myosin-Id OS=Mus musculus GN=Myo1d PE=1 SV=1
Length = 1006
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPM 53
SRV Q PGER+FH FYQLL G +L +++ + +
Sbjct: 189 SRVIVQQPGERSFHSFYQLLQGGSEQMLHSLHLQKSL 225
>sp|Q63357|MYO1D_RAT Unconventional myosin-Id OS=Rattus norvegicus GN=Myo1d PE=1 SV=3
Length = 1006
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPM 53
SRV Q PGER+FH FYQLL G +L +++ + +
Sbjct: 189 SRVIVQQPGERSFHSFYQLLQGGSEQMLHSLHLQKSL 225
>sp|P19524|MYO2_YEAST Myosin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MYO2 PE=1 SV=1
Length = 1574
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 15/22 (68%), Positives = 18/22 (81%)
Query: 17 SRVTYQAPGERNFHIFYQLLVG 38
SR+ YQ P ERN+HIFYQL+ G
Sbjct: 256 SRLVYQPPIERNYHIFYQLMAG 277
>sp|P12844|MYO3_CAEEL Myosin-3 OS=Caenorhabditis elegans GN=myo-3 PE=2 SV=1
Length = 1969
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHL 43
SRV QAPGER +HIFYQ++ G D L
Sbjct: 274 SRVVRQAPGERCYHIFYQIMSGNDPSL 300
>sp|F8VQB6|MYO10_MOUSE Unconventional myosin-X OS=Mus musculus GN=Myo10 PE=1 SV=1
Length = 2062
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 18/24 (75%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGAD 40
+RV Q PGERN+HIFY LL G D
Sbjct: 248 NRVVRQNPGERNYHIFYALLAGLD 271
>sp|A6ZZJ1|MYO3_YEAS7 Myosin-3 OS=Saccharomyces cerevisiae (strain YJM789) GN=MYO3 PE=3
SV=1
Length = 1270
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 19/89 (21%)
Query: 18 RVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHTCYTVAT--TSVDTI 75
RV Q ERNFHIFYQ GA ++ + P ++ YT A T+ DTI
Sbjct: 216 RVVSQIKNERNFHIFYQFTKGASDTYRQMFGVQMPEQY--------IYTAAAGCTTADTI 267
Query: 76 FPSSRRDYDPTDEPLR-------EEDRIW 97
+DY+ T E +R E+D+I+
Sbjct: 268 --DDVKDYEGTLEAMRTIGLVQEEQDQIF 294
>sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2
Length = 1568
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 15/22 (68%), Positives = 18/22 (81%)
Query: 17 SRVTYQAPGERNFHIFYQLLVG 38
SR+ YQ P ERN+HIFYQL+ G
Sbjct: 256 SRLVYQPPIERNYHIFYQLMAG 277
>sp|Q12965|MYO1E_HUMAN Unconventional myosin-Ie OS=Homo sapiens GN=MYO1E PE=1 SV=2
Length = 1108
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADV---HLLRVVNM 49
SRV + PGER+FHIFYQL+ GA H L + +M
Sbjct: 197 SRVVMRNPGERSFHIFYQLIEGASAEQKHSLGITSM 232
>sp|Q9USI6|MYO2_SCHPO Myosin type-2 heavy chain 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=myo2 PE=1 SV=1
Length = 1526
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHL 43
SRV +Q ERN+H+FYQLL GAD L
Sbjct: 256 SRVVHQNEFERNYHVFYQLLSGADTAL 282
>sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle OS=Cyprinus carpio PE=2
SV=2
Length = 1935
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 1 MSSYDIEMRIATGASMSRVTYQAPGERNFHIFYQLLVGADVHLLRVV 47
++S DIE + SRVT+Q ER++HIFYQL+ G LL +
Sbjct: 260 LASADIETYLL---EKSRVTFQLSAERSYHIFYQLMTGHKPELLEAL 303
>sp|Q29122|MYO6_PIG Unconventional myosin-VI OS=Sus scrofa GN=MYO6 PE=1 SV=1
Length = 1254
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRF 57
SR+ Q ERN+HIFY+L GA + ++++ P FR+
Sbjct: 233 SRICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRY 273
>sp|Q9UM54|MYO6_HUMAN Unconventional myosin-VI OS=Homo sapiens GN=MYO6 PE=1 SV=4
Length = 1294
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 17 SRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRF 57
SR+ Q ERN+HIFY+L GA + ++++ P FR+
Sbjct: 233 SRICVQGKEERNYHIFYRLCAGASEDIREKLHLSSPDNFRY 273
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,559,627
Number of Sequences: 539616
Number of extensions: 1323129
Number of successful extensions: 3861
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3653
Number of HSP's gapped (non-prelim): 211
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)