Query psy18112
Match_columns 107
No_of_seqs 152 out of 1040
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 22:51:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18112.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18112hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lkx_A Myosin IE heavy chain; 100.0 1.1E-33 3.9E-38 229.5 6.2 101 1-106 174-280 (697)
2 1kk8_A Myosin heavy chain, str 100.0 2.7E-33 9.4E-38 230.8 7.4 101 1-106 257-362 (837)
3 4db1_A Myosin-7; S1DC, cardiac 100.0 5.5E-33 1.9E-37 227.6 8.2 101 1-106 258-363 (783)
4 1w7j_A Myosin VA; motor protei 100.0 2.1E-33 7.2E-38 230.5 5.2 101 1-106 234-339 (795)
5 1i84_S Smooth muscle myosin he 100.0 1.2E-32 4.2E-37 233.0 7.4 101 1-106 261-365 (1184)
6 2v26_A Myosin VI; calmodulin-b 100.0 9.3E-33 3.2E-37 226.5 5.6 100 1-105 216-346 (784)
7 2dfs_A Myosin-5A; myosin-V, in 100.0 1.3E-32 4.6E-37 231.4 6.7 101 1-106 234-339 (1080)
8 1g8x_A Myosin II heavy chain f 100.0 1.5E-32 5.1E-37 229.8 6.9 101 1-106 253-358 (1010)
9 2ycu_A Non muscle myosin 2C, a 100.0 2.7E-32 9.2E-37 228.1 7.2 100 1-106 231-334 (995)
10 1w9i_A Myosin II heavy chain; 100.0 2E-32 7E-37 223.9 6.3 102 1-106 253-358 (770)
11 4anj_A Unconventional myosin-V 100.0 1.8E-32 6E-37 229.8 5.1 101 1-106 220-351 (1052)
12 1qjt_A EH1, epidermal growth f 66.2 7.3 0.00025 23.1 3.6 27 75-101 29-55 (99)
13 2bwb_A Ubiquitin-like protein 64.8 3.3 0.00011 21.8 1.6 20 73-92 4-23 (46)
14 1c07_A Protein (epidermal grow 61.8 8.7 0.0003 22.4 3.3 28 75-102 28-55 (95)
15 3neh_A Renal dipeptidase famil 60.3 7.8 0.00027 28.6 3.4 31 67-98 271-301 (318)
16 2pmy_A RAS and EF-hand domain- 59.3 9.6 0.00033 21.7 3.2 29 74-102 44-72 (91)
17 1n45_A Heme oxygenase 1, HO-1; 58.8 20 0.00069 24.8 5.3 48 44-98 152-201 (233)
18 1eh2_A EPS15; calcium binding, 58.6 11 0.00038 22.8 3.5 28 75-102 32-59 (106)
19 2knz_A Ubiquilin-4; cytoplasm, 57.9 6.5 0.00022 21.2 2.1 26 73-98 8-34 (53)
20 3oq9_A Tumor necrosis factor r 57.4 4 0.00014 24.5 1.2 29 69-97 5-33 (86)
21 1sk7_A Hypothetical protein PA 57.4 16 0.00055 24.7 4.4 46 46-98 135-180 (198)
22 1ixs_A Holliday junction DNA h 56.0 11 0.00036 21.1 2.8 26 75-100 16-41 (62)
23 1vg5_A RSGI RUH-014, rhomboid 55.0 6.3 0.00022 22.9 1.7 31 70-100 23-53 (73)
24 1wr1_B Ubiquitin-like protein 54.3 5 0.00017 22.3 1.2 22 72-93 13-34 (58)
25 1ify_A HHR23A, UV excision rep 54.2 8.2 0.00028 20.4 2.0 25 75-99 7-31 (49)
26 2lr2_A Immunoglobulin G-bindin 53.0 11 0.00037 22.4 2.5 19 88-106 18-36 (88)
27 2dna_A Unnamed protein product 51.5 7 0.00024 22.5 1.5 23 71-93 14-36 (67)
28 1l6x_B Minimized B-domain of p 50.7 15 0.00053 18.2 2.5 18 89-106 2-19 (34)
29 2jy5_A Ubiquilin-1; UBA, alter 50.0 12 0.0004 20.1 2.2 25 73-97 9-34 (52)
30 2dah_A Ubiquilin-3; UBA domain 49.5 4.8 0.00016 21.9 0.6 20 74-93 7-26 (54)
31 1fi6_A EH domain protein REPS1 48.8 13 0.00045 21.4 2.6 28 75-102 27-54 (92)
32 3fia_A Intersectin-1; EH 1 dom 48.6 19 0.00066 22.7 3.4 28 75-102 50-77 (121)
33 1j77_A HEMO, heme oxygenase; p 47.6 26 0.0009 23.8 4.3 45 46-97 130-174 (209)
34 1iq3_A Ralbp1-interacting prot 44.8 13 0.00043 22.6 2.1 29 74-102 39-67 (110)
35 1b0n_B Protein (SINI protein); 44.5 22 0.00074 19.7 2.8 30 73-102 12-41 (57)
36 2jq6_A EH domain-containing pr 42.4 24 0.00081 22.7 3.2 29 74-102 67-95 (139)
37 2cwb_A Chimera of immunoglobul 41.8 11 0.00039 23.5 1.5 20 73-92 63-82 (108)
38 1c7v_A CAVP, calcium vector pr 41.6 27 0.00093 18.8 3.1 27 75-101 26-55 (81)
39 1vej_A Riken cDNA 4931431F19; 40.8 9.1 0.00031 22.3 0.9 21 72-92 25-45 (74)
40 2i5g_A Amidohydrolase; NYSGXRC 40.1 23 0.00078 26.0 3.2 30 68-97 282-311 (325)
41 1tiz_A Calmodulin-related prot 37.8 37 0.0013 17.2 3.1 27 75-101 19-47 (67)
42 2b1u_A Calmodulin-like protein 36.8 39 0.0013 17.4 3.2 27 75-101 24-52 (71)
43 2opo_A Polcalcin CHE A 3; calc 36.4 40 0.0014 18.3 3.3 28 75-102 29-57 (86)
44 1itu_A Renal dipeptidase; glyc 36.1 26 0.00088 26.3 2.9 30 68-97 297-326 (369)
45 2rag_A Dipeptidase; aminohydro 36.1 29 0.00098 26.5 3.2 32 67-98 367-398 (417)
46 2kld_A Polycystin-2; PC2, PKD2 36.1 37 0.0012 20.7 3.3 28 74-101 63-90 (123)
47 1j02_A Heme oxygenase 1; alpha 35.9 79 0.0027 22.4 5.4 48 44-98 152-201 (267)
48 3mse_B Calcium-dependent prote 35.7 33 0.0011 21.7 3.2 28 74-101 56-83 (180)
49 2kn2_A Calmodulin; S MAPK phos 34.7 42 0.0014 18.5 3.2 27 75-101 27-55 (92)
50 1z96_A DNA-damage, UBA-domain 34.6 38 0.0013 16.3 2.6 24 76-99 4-27 (40)
51 3ezq_A Tumor necrosis factor r 33.9 15 0.00053 23.2 1.2 29 69-97 13-41 (115)
52 3ly0_A Dipeptidase AC. metallo 33.9 27 0.00092 26.2 2.7 30 68-97 314-343 (364)
53 1wov_A Heme oxygenase 2; HOMO 33.4 99 0.0034 21.5 5.5 48 44-98 142-193 (250)
54 3id7_A Dipeptidase; streptomyc 32.3 32 0.0011 26.1 2.9 30 68-97 329-358 (400)
55 3i5g_C Myosin catalytic light 32.3 32 0.0011 21.7 2.6 28 75-102 103-132 (159)
56 3b40_A PVDM, probable dipeptid 32.2 28 0.00095 26.6 2.6 32 67-98 366-397 (417)
57 2ktg_A Calmodulin, putative; e 31.4 53 0.0018 17.7 3.2 27 75-101 32-60 (85)
58 1s6j_A CDPK, calcium-dependent 31.1 55 0.0019 17.7 3.3 27 75-101 41-69 (87)
59 1nya_A Calerythrin; EF-hand, m 31.0 45 0.0016 20.4 3.2 28 74-101 119-146 (176)
60 2q32_A Heme oxygenase 2, HO-2; 30.6 88 0.003 22.1 4.9 48 44-98 172-221 (264)
61 1dv0_A DNA repair protein HHR2 29.9 17 0.00059 19.0 0.8 22 79-100 7-28 (47)
62 1q08_A Zn(II)-responsive regul 29.8 50 0.0017 19.2 3.0 26 76-101 5-30 (99)
63 2lv7_A Calcium-binding protein 28.3 37 0.0013 20.0 2.2 28 75-102 54-83 (100)
64 2sas_A Sarcoplasmic calcium-bi 28.0 40 0.0014 20.8 2.5 28 74-101 122-149 (185)
65 3akb_A Putative calcium bindin 28.0 58 0.002 19.6 3.3 27 75-101 116-142 (166)
66 2cp8_A NEXT to BRCA1 gene 1 pr 27.7 20 0.00068 19.6 0.8 21 74-94 7-27 (54)
67 2ccm_A Calexcitin; EF hand, ca 27.2 64 0.0022 20.2 3.4 28 74-101 126-153 (191)
68 2kgr_A Intersectin-1; structur 26.2 69 0.0024 19.0 3.3 28 75-102 32-59 (111)
69 1q80_A SCP, sarcoplasmic calci 26.0 46 0.0016 20.4 2.5 27 75-101 112-138 (174)
70 1s6i_A CDPK, calcium-dependent 25.8 57 0.0019 20.9 3.0 29 74-102 99-127 (188)
71 1avs_A Troponin C; muscle cont 24.4 82 0.0028 17.2 3.2 27 75-101 38-66 (90)
72 2g3q_A Protein YBL047C; endocy 24.3 75 0.0026 15.7 2.7 22 79-100 7-28 (43)
73 2fwt_A DHC, diheme cytochrome 24.2 82 0.0028 20.0 3.4 33 68-100 22-59 (125)
74 1wzd_A Heme oxygenase; electro 23.7 78 0.0027 21.3 3.5 31 68-98 164-195 (215)
75 2kz2_A Calmodulin, CAM; TR2C, 23.6 63 0.0022 18.3 2.6 26 76-101 48-75 (94)
76 1wiv_A UBP14, ubiquitin-specif 23.3 27 0.00094 20.0 0.9 24 77-100 30-53 (73)
77 1ich_A TNF-1, tumor necrosis f 22.8 26 0.00088 22.0 0.7 23 75-97 24-46 (112)
78 2d58_A Allograft inflammatory 22.3 88 0.003 17.9 3.2 27 75-101 50-78 (107)
79 1zda_A Mini protein A domain, 22.2 37 0.0013 17.2 1.1 15 81-95 16-30 (38)
80 2blf_B SORB, sulfite\:cytochro 22.1 99 0.0034 17.4 3.3 30 71-100 45-77 (81)
81 2ekk_A UBA domain from E3 ubiq 21.8 20 0.00068 18.5 0.1 22 78-99 11-32 (47)
82 4fp9_B Mterf domain-containing 21.7 71 0.0024 23.5 3.1 27 73-99 43-69 (335)
83 2hpk_A Photoprotein berovin; s 21.3 72 0.0025 20.4 2.8 27 75-101 146-172 (208)
84 1g6u_A Domain swapped dimer; d 21.1 59 0.002 16.7 1.8 21 78-98 7-27 (48)
85 1top_A Troponin C; contractIle 20.8 1E+02 0.0034 18.4 3.3 27 75-101 114-142 (162)
86 2dak_A Ubiquitin carboxyl-term 20.7 47 0.0016 18.2 1.5 22 78-99 11-32 (63)
87 2joj_A Centrin protein; N-term 20.6 55 0.0019 17.2 1.8 26 76-101 26-53 (77)
88 1veg_A NEDD8 ultimate buster-1 20.6 33 0.0011 20.3 0.9 25 76-100 29-53 (83)
89 2d8n_A Recoverin; structural g 20.5 81 0.0028 20.1 2.9 26 75-100 17-42 (207)
90 1rro_A RAT oncomodulin; calciu 20.5 1.2E+02 0.004 17.1 3.4 27 75-101 59-90 (108)
No 1
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=99.98 E-value=1.1e-33 Score=229.52 Aligned_cols=101 Identities=24% Similarity=0.424 Sum_probs=96.2
Q ss_pred CccceehhhhccCCCcceecccCCCCcchhHHHHHhcCCCHHHHHHccCC-CCccccccccCCc-cccccCCchhhhhHH
Q psy18112 1 MSSYDIEMRIATGASMSRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMA-EPMRFRFGRLQHT-CYTVATTSVDTIFPS 78 (107)
Q Consensus 1 ~~ga~i~~yL~~~LEKSRVv~q~~gErnfHIFY~Ll~g~~~~~~~~l~L~-~~~~y~y~~l~~~-~~~~~~~~d~~~f~~ 78 (107)
|+||+|++|| |||||||+|++|||||||||||++|+++++++.|+|. +++.|+| |+++ |.+++++||+++|++
T Consensus 174 i~Ga~I~~yL---LEKSRVv~q~~gERnfHIFYqllaG~~~~~~~~l~L~~~~~~y~y--L~~~~~~~~~~~dD~~~f~~ 248 (697)
T 1lkx_A 174 PIGGKITNYL---LEKSRVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEY--LKKSGCFDVSTIDDSGEFKI 248 (697)
T ss_dssp EEEEEEEEEC---CCGGGGTCCCTTCCCBHHHHHHHTTSCHHHHHHHTCCSCGGGSHH--HHHTTCCCCTTCCHHHHHHH
T ss_pred Eeeeeeeeee---ccCceeeeecCCCCceeehhHHhcCCCHHHHHHhcCCCChhhCcc--ccCCCCcccCCCchHHHHHH
Confidence 5799999999 9999999999999999999999999999999999998 9999999 9877 678899999999999
Q ss_pred HHHhhccCCCChHHHHHHHHHH----hcCCCC
Q psy18112 79 SRRDYDPTDEPLREEDRIWFRE----ELGKLN 106 (107)
Q Consensus 79 l~~al~~lGf~~~e~~~I~~il----~~~~~~ 106 (107)
+++||++|||+++|+..||+|| +|||+.
T Consensus 249 ~~~Am~~lG~~~~e~~~i~~ilaaILhLGNi~ 280 (697)
T 1lkx_A 249 IVKAMETLGLKESDQNSIWRILAAILHIGNIT 280 (697)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHhcccce
Confidence 9999999999999999999987 899873
No 2
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=99.98 E-value=2.7e-33 Score=230.77 Aligned_cols=101 Identities=28% Similarity=0.431 Sum_probs=96.6
Q ss_pred CccceehhhhccCCCcceecccCCCCcchhHHHHHhcCCCHHHHHHccC-CCCccccccccCCccccccCCchhhhhHHH
Q psy18112 1 MSSYDIEMRIATGASMSRVTYQAPGERNFHIFYQLLVGADVHLLRVVNM-AEPMRFRFGRLQHTCYTVATTSVDTIFPSS 79 (107)
Q Consensus 1 ~~ga~i~~yL~~~LEKSRVv~q~~gErnfHIFY~Ll~g~~~~~~~~l~L-~~~~~y~y~~l~~~~~~~~~~~d~~~f~~l 79 (107)
|+||+|++|| |||||||+|++||||||||||||+|+++++++.|+| .+++.|+| |++++.+++++||+++|+++
T Consensus 257 i~Ga~I~~YL---LEKSRVv~q~~gERNfHIFYqLlaG~~~~~~~~l~L~~~~~~y~y--L~~g~~~~~~~dD~~~f~~~ 331 (837)
T 1kk8_A 257 IAGADIETYL---LEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSF--INQGCLTVDNIDDVEEFKLC 331 (837)
T ss_dssp EEEEEEEEEC---CCGGGGTCCCTTCCSBHHHHHHTSCSSGGGHHHHTCCSCGGGCTT--TCSSCSCBTTBCHHHHHHHH
T ss_pred EeeeEEEEEe---ccCceeeeecCCCCceeehHHHHcCCCHHHHHHhCCCCChhhccc--ccCCCcccCCcChHHHHHHH
Confidence 5799999999 999999999999999999999999999999999999 59999999 99998888999999999999
Q ss_pred HHhhccCCCChHHHHHHHHHH----hcCCCC
Q psy18112 80 RRDYDPTDEPLREEDRIWFRE----ELGKLN 106 (107)
Q Consensus 80 ~~al~~lGf~~~e~~~I~~il----~~~~~~ 106 (107)
++||++|||+++|+..||+|| .|||+.
T Consensus 332 ~~Am~~lGfs~~e~~~i~~ilAaILhLGNi~ 362 (837)
T 1kk8_A 332 DEAFDILGFTKEEKQSMFKCTASILHMGEMK 362 (837)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhcCcCHHHHHHHHHHHHHHHhhccce
Confidence 999999999999999999987 899873
No 3
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=99.98 E-value=5.5e-33 Score=227.61 Aligned_cols=101 Identities=26% Similarity=0.448 Sum_probs=96.5
Q ss_pred CccceehhhhccCCCcceecccCCCCcchhHHHHHhcCCCHHHHHHccCC-CCccccccccCCccccccCCchhhhhHHH
Q psy18112 1 MSSYDIEMRIATGASMSRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMA-EPMRFRFGRLQHTCYTVATTSVDTIFPSS 79 (107)
Q Consensus 1 ~~ga~i~~yL~~~LEKSRVv~q~~gErnfHIFY~Ll~g~~~~~~~~l~L~-~~~~y~y~~l~~~~~~~~~~~d~~~f~~l 79 (107)
|+||+|++|| |||||||+|++||||||||||||+|+++++++.|+|. ++..|+| |++++..+++++|+++|+.+
T Consensus 258 i~Ga~I~~YL---LEKSRVv~q~~gERnfHIFYqLlaG~~~~~~~~l~L~~~~~~y~y--l~~g~~~~~~~dD~~~f~~~ 332 (783)
T 4db1_A 258 LASADIETYL---LEKSRVIFQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYAF--ISQGETTVASIDDAEELMAT 332 (783)
T ss_dssp EEEEEEEEEC---CCGGGGTCCCTTCCSBHHHHHHHTCSSHHHHHHTTCCSCGGGCGG--GCSSCCCCTTCCHHHHHHHH
T ss_pred EeeeEEEEee---cccceeeccCCCCCcchhHHHHHcCCCHHHHHHhccCCCHHHCcc--ccCCCcccCCCCcHHHHHHH
Confidence 5799999999 9999999999999999999999999999999999996 8999999 99998889999999999999
Q ss_pred HHhhccCCCChHHHHHHHHHH----hcCCCC
Q psy18112 80 RRDYDPTDEPLREEDRIWFRE----ELGKLN 106 (107)
Q Consensus 80 ~~al~~lGf~~~e~~~I~~il----~~~~~~ 106 (107)
++||++|||+++|+..||+|| +|||+.
T Consensus 333 ~~Am~~lGfs~~e~~~i~~ilaaILhLGNi~ 363 (783)
T 4db1_A 333 DNAFDVLGFTSEEKNSMYKLTGAIMHFGNMK 363 (783)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHhhccce
Confidence 999999999999999999987 899873
No 4
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=99.98 E-value=2.1e-33 Score=230.51 Aligned_cols=101 Identities=20% Similarity=0.293 Sum_probs=96.1
Q ss_pred CccceehhhhccCCCcceecccCCCCcchhHHHHHhcCCCHHHHHHccCCCCccccccccCCc-cccccCCchhhhhHHH
Q psy18112 1 MSSYDIEMRIATGASMSRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHT-CYTVATTSVDTIFPSS 79 (107)
Q Consensus 1 ~~ga~i~~yL~~~LEKSRVv~q~~gErnfHIFY~Ll~g~~~~~~~~l~L~~~~~y~y~~l~~~-~~~~~~~~d~~~f~~l 79 (107)
|+||+|++|| |||||||+|++||||||||||||+|+++++++.|+|.+++.|+| |+++ +.++++++|+++|+++
T Consensus 234 i~Ga~I~~YL---LEKSRVv~q~~gERNfHIFYqLlag~~~~~~~~l~L~~~~~y~y--l~~~~~~~~~~~dD~~~f~~~ 308 (795)
T 1w7j_A 234 IIGANMRTYL---LEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHY--TKQGGSPVIDGIDDAKEMVNT 308 (795)
T ss_dssp EEEEEEEEEC---CCGGGGTCCCTTCCSBHHHHHHHHTTTSGGGGGGCCCCTTTSHH--HHTTSCCCCTTCCHHHHHHHH
T ss_pred EeeeeceEEe---cccceEeccCCCCCchHhHHHHHcCCCHHHHHHccCCChHhCcc--ccCCCCCcCCCccHHHHHHHH
Confidence 5799999999 99999999999999999999999999999999999999999999 9988 5678999999999999
Q ss_pred HHhhccCCCChHHHHHHHHHH----hcCCCC
Q psy18112 80 RRDYDPTDEPLREEDRIWFRE----ELGKLN 106 (107)
Q Consensus 80 ~~al~~lGf~~~e~~~I~~il----~~~~~~ 106 (107)
++||++|||+++|+..||+|| +|||+.
T Consensus 309 ~~Am~~lG~s~~e~~~i~~ilaaILhLGNi~ 339 (795)
T 1w7j_A 309 RQACTLLGISDSYQMGIFRILAGILHLGNVE 339 (795)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHhccCce
Confidence 999999999999999999977 899874
No 5
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.97 E-value=1.2e-32 Score=232.97 Aligned_cols=101 Identities=24% Similarity=0.327 Sum_probs=97.1
Q ss_pred CccceehhhhccCCCcceecccCCCCcchhHHHHHhcCCCHHHHHHccCCCCccccccccCCccccccCCchhhhhHHHH
Q psy18112 1 MSSYDIEMRIATGASMSRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHTCYTVATTSVDTIFPSSR 80 (107)
Q Consensus 1 ~~ga~i~~yL~~~LEKSRVv~q~~gErnfHIFY~Ll~g~~~~~~~~l~L~~~~~y~y~~l~~~~~~~~~~~d~~~f~~l~ 80 (107)
|+||+|++|| |||||||+|++||||||||||||+|++++++..|+|.++..|+| |++++.++++++|+++|..++
T Consensus 261 i~ga~i~~yl---LEksRv~~q~~~ErnfhiFYqll~g~~~~~~~~l~l~~~~~~~y--l~~~~~~~~~~~d~~~f~~~~ 335 (1184)
T 1i84_S 261 IVGANIETYL---LEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTF--LSNGHVPIPAQQDDEMFQETL 335 (1184)
T ss_dssp EEEEEEEECC---CCCGGGSCCCTTCCCCTHHHHHHHHCCHHHHHHTTCCCTTSCSS--CTTSSCCCTTCCHHHHHHHHH
T ss_pred EeeeEEeEee---cCCceeeeecCCCCchhhHHHHHcCCCHHHHHHcCCCChHhCCc--cCCCCcCCCCCChHHHHHHHH
Confidence 5799999999 99999999999999999999999999999999999999999999 999988899999999999999
Q ss_pred HhhccCCCChHHHHHHHHHH----hcCCCC
Q psy18112 81 RDYDPTDEPLREEDRIWFRE----ELGKLN 106 (107)
Q Consensus 81 ~al~~lGf~~~e~~~I~~il----~~~~~~ 106 (107)
.||++|||+++++..||+|| +|||+.
T Consensus 336 ~a~~~lg~~~~e~~~i~~ilaaiLhlGni~ 365 (1184)
T 1i84_S 336 EAMTIMGFTEEEQTSILRVVSSVLQLGNIV 365 (1184)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHhceeCHHHHHHHHHHHHHHHhhcCce
Confidence 99999999999999999977 999973
No 6
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=99.97 E-value=9.3e-33 Score=226.49 Aligned_cols=100 Identities=22% Similarity=0.313 Sum_probs=93.4
Q ss_pred CccceehhhhccCCCcceecccCCCCcchhHHHHHhcCCCHHHHHHccCCCCccccccccCCccc---------------
Q psy18112 1 MSSYDIEMRIATGASMSRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHTCY--------------- 65 (107)
Q Consensus 1 ~~ga~i~~yL~~~LEKSRVv~q~~gErnfHIFY~Ll~g~~~~~~~~l~L~~~~~y~y~~l~~~~~--------------- 65 (107)
|+||+|++|| |||||||+|++||||||||||||+|+++++++.|+|.+++.|+| |++++.
T Consensus 216 i~Ga~I~~YL---LEKSRVv~q~~gERNfHIFYqLlaG~~~~~~~~l~L~~~~~y~y--L~~g~~~~~~~~~~~~~i~~~ 290 (784)
T 2v26_A 216 VVGGFVSHYL---LEKSRICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRY--LNRGCTRYFANKETDKQILQN 290 (784)
T ss_dssp EEEEEEEEEC---CCCGGGTCCCTTCCSBHHHHHHHHHSCHHHHHHTTCCCGGGCHH--HHTSCCCCBCCHHHHTTSCGG
T ss_pred Eeeeeeeeee---ccCCeEeeecCCCCcchhhHHHHcCCCHHHHHHcCCCChhhCcc--ccCCCcccccccccccccccc
Confidence 5799999999 99999999999999999999999999999999999999999999 988742
Q ss_pred ------------cccCCchhhhhHHHHHhhccCCCChHHHHHHHHHH----hcCCC
Q psy18112 66 ------------TVATTSVDTIFPSSRRDYDPTDEPLREEDRIWFRE----ELGKL 105 (107)
Q Consensus 66 ------------~~~~~~d~~~f~~l~~al~~lGf~~~e~~~I~~il----~~~~~ 105 (107)
.++++||+++|+++++||++|||+++|+..||+|| +|||+
T Consensus 291 ~~s~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lG~~~~e~~~i~~ilaaILhLGNi 346 (784)
T 2v26_A 291 RKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNI 346 (784)
T ss_dssp GCCHHHHHHCCBCCSSCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccccccccccCCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccc
Confidence 34578999999999999999999999999999977 89987
No 7
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.97 E-value=1.3e-32 Score=231.37 Aligned_cols=101 Identities=20% Similarity=0.293 Sum_probs=96.4
Q ss_pred CccceehhhhccCCCcceecccCCCCcchhHHHHHhcCCCHHHHHHccCCCCccccccccCCc-cccccCCchhhhhHHH
Q psy18112 1 MSSYDIEMRIATGASMSRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHT-CYTVATTSVDTIFPSS 79 (107)
Q Consensus 1 ~~ga~i~~yL~~~LEKSRVv~q~~gErnfHIFY~Ll~g~~~~~~~~l~L~~~~~y~y~~l~~~-~~~~~~~~d~~~f~~l 79 (107)
|+||+|++|| |||||||+|++||||||||||||+|+++++++.|+|.++..|+| |+++ |.+++++||+++|..+
T Consensus 234 i~Ga~i~~yL---LEKsRVv~q~~~ERnfHIFYqllag~~~~~~~~l~L~~~~~y~y--l~~~~~~~~~~~dD~~~f~~~ 308 (1080)
T 2dfs_A 234 IIGANMRTYL---LEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHY--TKQGGSPVIDGIDDAKEMVNT 308 (1080)
T ss_dssp EEEEEEEEEC---CCCGGGTCCCTTCCSBHHHHHHHHTTTSSGGGGTCCCCTTTCTT--TSTTSCCSCTTCCHHHHHHHH
T ss_pred EeeecceeEe---ecCceeeccCCCCCcchhHHHHHcCCChHHHHHccCCCHHhcCc--ccCCCCCCCCCccHHHHHHHH
Confidence 5799999999 99999999999999999999999999999999999999999999 9988 6678999999999999
Q ss_pred HHhhccCCCChHHHHHHHHHH----hcCCCC
Q psy18112 80 RRDYDPTDEPLREEDRIWFRE----ELGKLN 106 (107)
Q Consensus 80 ~~al~~lGf~~~e~~~I~~il----~~~~~~ 106 (107)
+.||++|||+++|+..||+|| +|||+.
T Consensus 309 ~~A~~~lg~~~~e~~~i~~ilaaILhLGni~ 339 (1080)
T 2dfs_A 309 RQACTLLGISDSYQMGIFRILAGILHLGNVE 339 (1080)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHhccCce
Confidence 999999999999999999987 999974
No 8
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.97 E-value=1.5e-32 Score=229.83 Aligned_cols=101 Identities=31% Similarity=0.509 Sum_probs=96.7
Q ss_pred CccceehhhhccCCCcceecccCCCCcchhHHHHHhcCCCHHHHHHccCCCCccccccccCCc-cccccCCchhhhhHHH
Q psy18112 1 MSSYDIEMRIATGASMSRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHT-CYTVATTSVDTIFPSS 79 (107)
Q Consensus 1 ~~ga~i~~yL~~~LEKSRVv~q~~gErnfHIFY~Ll~g~~~~~~~~l~L~~~~~y~y~~l~~~-~~~~~~~~d~~~f~~l 79 (107)
|+||+|++|| |||||||+|++||||||||||||+|+++++++.|+|.++..|+| |+++ |.++++++|+++|+.+
T Consensus 253 i~Ga~i~~yL---LEksRvv~q~~~ERnfHIFYqll~g~~~~~~~~l~L~~~~~y~y--l~~~~~~~~~~~dD~~~f~~~ 327 (1010)
T 1g8x_A 253 ISGASIQSYL---LEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNY--LNQSGCVDIKGVSDEDEFKIT 327 (1010)
T ss_dssp EEEEEEEEEC---CCGGGGTCCCTTCCCBHHHHHHHHHCCHHHHHHHTCCCGGGCGG--GSSSSCCCCBTCCHHHHHHHH
T ss_pred CcceEEEEEE---cCCceeeeecCCCCcchhHHHHHcCCCHHHHHHhCCCChHhcch--hcCCCccccCCCChHHHHHHH
Confidence 5799999999 99999999999999999999999999999999999999999999 9988 5889999999999999
Q ss_pred HHhhccCCCChHHHHHHHHHH----hcCCCC
Q psy18112 80 RRDYDPTDEPLREEDRIWFRE----ELGKLN 106 (107)
Q Consensus 80 ~~al~~lGf~~~e~~~I~~il----~~~~~~ 106 (107)
++||++|||+++|+..||+|| .|||+.
T Consensus 328 ~~A~~~lg~~~~e~~~i~~ilaaILhLGni~ 358 (1010)
T 1g8x_A 328 RQAMDIVGFSQEEQMSIFKIIAGILHLGNIK 358 (1010)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHhccce
Confidence 999999999999999999977 899874
No 9
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.97 E-value=2.7e-32 Score=228.14 Aligned_cols=100 Identities=24% Similarity=0.278 Sum_probs=95.6
Q ss_pred CccceehhhhccCCCcceecccCCCCcchhHHHHHhcCCCHHHHHHccCCCCccccccccCCccccccCCchhhhhHHHH
Q psy18112 1 MSSYDIEMRIATGASMSRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHTCYTVATTSVDTIFPSSR 80 (107)
Q Consensus 1 ~~ga~i~~yL~~~LEKSRVv~q~~gErnfHIFY~Ll~g~~~~~~~~l~L~~~~~y~y~~l~~~~~~~~~~~d~~~f~~l~ 80 (107)
|+||+|++|| |||||||+|++||||||||||||+|+++++++.|+|.++..|+| |++++.++++ ||+++|++++
T Consensus 231 i~Ga~i~~yL---LEksRvv~q~~~ERnfHIFYqll~g~~~~~~~~l~L~~~~~y~y--l~~~~~~~~~-dD~~~f~~~~ 304 (995)
T 2ycu_A 231 IVGANIETYL---LEKSRAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCSHYRF--LTNGPSSSPG-QERELFQETL 304 (995)
T ss_dssp EEEEEEEEEC---CCGGGGTCCCTTCCCBHHHHHHHHHCCHHHHHHTTCCCGGGCTT--STTCSCSSTT-THHHHHHHHH
T ss_pred EeeeEEEEEe---ccCCeeeccCCCCCcchhHHHHHcCCCHHHHHHcCCCChHHccc--ccCCccccCC-cHHHHHHHHH
Confidence 5799999999 99999999999999999999999999999999999999999999 9999777888 9999999999
Q ss_pred HhhccCCCChHHHHHHHHHH----hcCCCC
Q psy18112 81 RDYDPTDEPLREEDRIWFRE----ELGKLN 106 (107)
Q Consensus 81 ~al~~lGf~~~e~~~I~~il----~~~~~~ 106 (107)
.||++|||+++|+..||+|| .|||+.
T Consensus 305 ~A~~~lg~~~~e~~~i~~ilaaILhlGni~ 334 (995)
T 2ycu_A 305 ESLRVLGFSHEEIISMLRMVSAVLQFGNIA 334 (995)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHGGGCC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHhhccce
Confidence 99999999999999999977 899873
No 10
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=99.97 E-value=2e-32 Score=223.89 Aligned_cols=102 Identities=30% Similarity=0.453 Sum_probs=95.4
Q ss_pred CccceehhhhccCCCcceecccCCCCcchhHHHHHhcCCCHHHHHHccCCCCccccccccCCccccccCCchhhhhHHHH
Q psy18112 1 MSSYDIEMRIATGASMSRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHTCYTVATTSVDTIFPSSR 80 (107)
Q Consensus 1 ~~ga~i~~yL~~~LEKSRVv~q~~gErnfHIFY~Ll~g~~~~~~~~l~L~~~~~y~y~~l~~~~~~~~~~~d~~~f~~l~ 80 (107)
|+||+|++|| |||||||+|++|||||||||||++|+++++++.|+|.++..|+|. +++++.++++++|+++|++++
T Consensus 253 i~Ga~I~~yL---LEKSRVv~q~~gERnfHIFYqLlaG~~~~~~~~l~L~~~~~y~yl-l~~g~~~~~~~dD~~~f~~~~ 328 (770)
T 1w9i_A 253 ISGASIQSYL---LEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYL-NQSGCVDIKGVSDSEEFKITR 328 (770)
T ss_dssp EEEEEEEEEC---CCGGGGTCCCTTCCSBHHHHHHHHHCCHHHHHHHTCCCGGGCTTT-SSSSCCCCTTCCHHHHHHHHH
T ss_pred EeeeEEEEEe---ccCceeecccCCCCcchhHHHHhcCCCHHHHHHhCCCChhhcccc-ccCCccccCCCchHHHHHHHH
Confidence 5799999999 999999999999999999999999999999999999999999992 456677889999999999999
Q ss_pred HhhccCCCChHHHHHHHHHH----hcCCCC
Q psy18112 81 RDYDPTDEPLREEDRIWFRE----ELGKLN 106 (107)
Q Consensus 81 ~al~~lGf~~~e~~~I~~il----~~~~~~ 106 (107)
+||++|||+++|+..||+|| +|||+.
T Consensus 329 ~Am~~lGf~~~e~~~i~~ilaaILhLGNi~ 358 (770)
T 1w9i_A 329 QAMDIVGFSQEEQMSIFKIIAGILHLGNIK 358 (770)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHhhcCce
Confidence 99999999999999999987 899874
No 11
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=99.97 E-value=1.8e-32 Score=229.80 Aligned_cols=101 Identities=21% Similarity=0.286 Sum_probs=94.3
Q ss_pred CccceehhhhccCCCcceecccCCCCcchhHHHHHhcCCCHHHHHHccCCCCccccccccCCc-----------------
Q psy18112 1 MSSYDIEMRIATGASMSRVTYQAPGERNFHIFYQLLVGADVHLLRVVNMAEPMRFRFGRLQHT----------------- 63 (107)
Q Consensus 1 ~~ga~i~~yL~~~LEKSRVv~q~~gErnfHIFY~Ll~g~~~~~~~~l~L~~~~~y~y~~l~~~----------------- 63 (107)
|+||+|++|| |||||||+|++||||||||||||+|+++++++.|+|.+++.|+| |+++
T Consensus 220 i~Ga~I~~YL---LEKSRVv~q~~gERNfHIFYqLlaGa~~~~r~~l~L~~~~~y~y--L~qg~~~~~~~~~~~~~~~~~ 294 (1052)
T 4anj_A 220 VVGGFVSHYL---LEKSRICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRY--LNRGCTRYFANKETDKQILQN 294 (1052)
T ss_dssp EEEEEEEEEC---CCSGGGTCCCTTCCSBHHHHHHHHHCCHHHHHHHTCCCGGGCHH--HHTSCCCCBCCHHHHTTSCGG
T ss_pred EEEEEEeccc---cccCceeecCCCCCCcccHHHHhcCCCHHHHHHcCCCChHhCch--hcCCCccccccccchhhhccc
Confidence 5799999999 99999999999999999999999999999999999999999999 9875
Q ss_pred ----------cccccCCchhhhhHHHHHhhccCCCChHHHHHHHHHH----hcCCCC
Q psy18112 64 ----------CYTVATTSVDTIFPSSRRDYDPTDEPLREEDRIWFRE----ELGKLN 106 (107)
Q Consensus 64 ----------~~~~~~~~d~~~f~~l~~al~~lGf~~~e~~~I~~il----~~~~~~ 106 (107)
+..++++||+++|.++++||++|||+++|+..||+|| +|||+.
T Consensus 295 ~~~~~~~~~g~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~iLAaILhLGNi~ 351 (1052)
T 4anj_A 295 RKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNID 351 (1052)
T ss_dssp GCCHHHHHHCCBCCSSCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred ccchhhccCCCccCCCcchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccee
Confidence 3456789999999999999999999999999999987 899874
No 12
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=66.24 E-value=7.3 Score=23.14 Aligned_cols=27 Identities=11% Similarity=0.073 Sum_probs=21.6
Q ss_pred hhHHHHHhhccCCCChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTDEPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lGf~~~e~~~I~~il~ 101 (107)
..+++..+|..+|+++++...||+.+.
T Consensus 29 s~~el~~~l~~~~l~~~~l~~i~~~~D 55 (99)
T 1qjt_A 29 LALDAAAFLKKSGLPDLILGKIWDLAD 55 (99)
T ss_dssp CSHHHHHHHHTSSSCHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHC
Confidence 345566777778999999999999884
No 13
>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A
Probab=64.77 E-value=3.3 Score=21.81 Aligned_cols=20 Identities=5% Similarity=-0.047 Sum_probs=15.9
Q ss_pred hhhhHHHHHhhccCCCChHH
Q psy18112 73 DTIFPSSRRDYDPTDEPLRE 92 (107)
Q Consensus 73 ~~~f~~l~~al~~lGf~~~e 92 (107)
.+.|+.-.+.|..|||++++
T Consensus 4 ~~~~~~~i~~L~~MGF~d~~ 23 (46)
T 2bwb_A 4 EERYEHQLRQLNDMGFFDFD 23 (46)
T ss_dssp HHHTHHHHHHHHHTTCCCHH
T ss_pred hHHHHHHHHHHHHcCCCcHH
Confidence 35788888999999997654
No 14
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=61.84 E-value=8.7 Score=22.40 Aligned_cols=28 Identities=18% Similarity=0.039 Sum_probs=22.6
Q ss_pred hhHHHHHhhccCCCChHHHHHHHHHHhc
Q psy18112 75 IFPSSRRDYDPTDEPLREEDRIWFREEL 102 (107)
Q Consensus 75 ~f~~l~~al~~lGf~~~e~~~I~~il~~ 102 (107)
..+++..+|..+|++.+++..||+.+..
T Consensus 28 ~~~el~~~l~~~g~~~~~~~~i~~~~D~ 55 (95)
T 1c07_A 28 SGLEVREIFLKTGLPSTLLAHIWSLCDT 55 (95)
T ss_dssp CHHHHHHHHHTTTCCHHHHHHHHHHHCT
T ss_pred eHHHHHHHHHHcCCCHHHHHHHHHHHCC
Confidence 4566777788889999999999998743
No 15
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=60.28 E-value=7.8 Score=28.60 Aligned_cols=31 Identities=10% Similarity=-0.098 Sum_probs=26.9
Q ss_pred ccCCchhhhhHHHHHhhccCCCChHHHHHHHH
Q psy18112 67 VATTSVDTIFPSSRRDYDPTDEPLREEDRIWF 98 (107)
Q Consensus 67 ~~~~~d~~~f~~l~~al~~lGf~~~e~~~I~~ 98 (107)
.++..|..+|..+.++|.. |++++++..|+-
T Consensus 271 p~gl~d~s~~p~L~~~L~~-g~se~~i~ki~g 301 (318)
T 3neh_A 271 VKGLEHVGKYQSFLETLEK-HYTKEEIEGFAS 301 (318)
T ss_dssp BBTBSSGGGHHHHHHHHTT-TSCHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHh-cCCHHHHHHHHh
Confidence 3567889999999999999 999999998763
No 16
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=59.29 E-value=9.6 Score=21.72 Aligned_cols=29 Identities=7% Similarity=-0.068 Sum_probs=22.8
Q ss_pred hhhHHHHHhhccCCCChHHHHHHHHHHhc
Q psy18112 74 TIFPSSRRDYDPTDEPLREEDRIWFREEL 102 (107)
Q Consensus 74 ~~f~~l~~al~~lGf~~~e~~~I~~il~~ 102 (107)
-...++..+|..+|++.+++..+|..+..
T Consensus 44 I~~~El~~~l~~~g~~~~~~~~~~~~~D~ 72 (91)
T 2pmy_A 44 LEREEFRALCTELRVRPADAEAVFQRLDA 72 (91)
T ss_dssp EEHHHHHHHHHHTTCCHHHHHHHHHHHCT
T ss_pred CcHHHHHHHHHHcCcCHHHHHHHHHHhCC
Confidence 34566777788889999999999988753
No 17
>1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 3tgm_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* ...
Probab=58.82 E-value=20 Score=24.83 Aligned_cols=48 Identities=10% Similarity=0.170 Sum_probs=33.5
Q ss_pred HHHccCCC-CccccccccCCccccccCCchhhhhHH-HHHhhccCCCChHHHHHHHH
Q psy18112 44 LRVVNMAE-PMRFRFGRLQHTCYTVATTSVDTIFPS-SRRDYDPTDEPLREEDRIWF 98 (107)
Q Consensus 44 ~~~l~L~~-~~~y~y~~l~~~~~~~~~~~d~~~f~~-l~~al~~lGf~~~e~~~I~~ 98 (107)
.+.++|.+ ....+| +. .++..|.+.|.. .++.|+.++++++++..|..
T Consensus 152 ~~~l~L~~~~~g~~f--~~-----f~~~~~~~~~k~~fr~~Ld~~~l~~~e~~~ii~ 201 (233)
T 1n45_A 152 QKALDLPSSGEGLAF--FT-----FPNIASATKFKQLYRSRMNSLEMTPAVRQRVIE 201 (233)
T ss_dssp HHHHCCCSCSCSCGG--GC-----CTTCSCHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred HHhcCCCCCCCccee--ec-----cCCcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 34577763 344445 32 345567888988 89999999999998877643
No 18
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=58.58 E-value=11 Score=22.84 Aligned_cols=28 Identities=11% Similarity=0.120 Sum_probs=22.7
Q ss_pred hhHHHHHhhccCCCChHHHHHHHHHHhc
Q psy18112 75 IFPSSRRDYDPTDEPLREEDRIWFREEL 102 (107)
Q Consensus 75 ~f~~l~~al~~lGf~~~e~~~I~~il~~ 102 (107)
...++..+|..+|+++++...||..+..
T Consensus 32 s~~el~~~l~~~gl~~~el~~i~~~~D~ 59 (106)
T 1eh2_A 32 SGDKVKPVLLNSKLPVDILGRVWELSDI 59 (106)
T ss_dssp BHHHHHHHHHTTTCCHHHHHHHHHHHCS
T ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHcC
Confidence 4456777788889999999999998854
No 19
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=57.94 E-value=6.5 Score=21.16 Aligned_cols=26 Identities=4% Similarity=0.003 Sum_probs=18.3
Q ss_pred hhhhHHHHHhhccCCC-ChHHHHHHHH
Q psy18112 73 DTIFPSSRRDYDPTDE-PLREEDRIWF 98 (107)
Q Consensus 73 ~~~f~~l~~al~~lGf-~~~e~~~I~~ 98 (107)
...|+.-.+.|..||| +.+......+
T Consensus 8 e~~~~~~l~~L~~MGF~~~~~~~~AL~ 34 (53)
T 2knz_A 8 EVRFQQQLEQLNSMGFINREANLQALI 34 (53)
T ss_dssp HHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 4678888999999999 5544344333
No 20
>3oq9_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS; 6.80A {Mus musculus}
Probab=57.38 E-value=4 Score=24.49 Aligned_cols=29 Identities=10% Similarity=0.050 Sum_probs=23.1
Q ss_pred CCchhhhhHHHHHhhccCCCChHHHHHHH
Q psy18112 69 TTSVDTIFPSSRRDYDPTDEPLREEDRIW 97 (107)
Q Consensus 69 ~~~d~~~f~~l~~al~~lGf~~~e~~~I~ 97 (107)
.+.|.-.+.+.++.+..+|+++.+++.|-
T Consensus 5 ~ia~~~~~~~wK~~~R~LGlse~~Id~I~ 33 (86)
T 3oq9_A 5 RIAEDMTIQEAKKFARENNIKEGKIDEIM 33 (86)
T ss_dssp HHHHHSCHHHHHHHHHTTTSCHHHHHHHH
T ss_pred hHHHHcCHHHHHHHHHHcCCCHhHHHHHH
Confidence 34456678888899999999999998764
No 21
>1sk7_A Hypothetical protein PA-HO; heme oxygenase, heme degradation, regioselectivity, oxidored; HET: HEM; 1.60A {Pseudomonas aeruginosa} SCOP: a.132.1.2
Probab=57.36 E-value=16 Score=24.68 Aligned_cols=46 Identities=15% Similarity=-0.015 Sum_probs=32.8
Q ss_pred HccCCCCccccccccCCccccccCCchhhhhHHHHHhhccCCCChHHHHHHHH
Q psy18112 46 VVNMAEPMRFRFGRLQHTCYTVATTSVDTIFPSSRRDYDPTDEPLREEDRIWF 98 (107)
Q Consensus 46 ~l~L~~~~~y~y~~l~~~~~~~~~~~d~~~f~~l~~al~~lGf~~~e~~~I~~ 98 (107)
.++|++....+| +. ..+..+.+.|...+.+|+.+.++++++..|..
T Consensus 135 ~l~l~~~~g~~f--~~-----~~~~~~~~~wk~f~~~Ld~l~~d~~~~~~ii~ 180 (198)
T 1sk7_A 135 ALELDENFGARH--LA-----EPEGGRAQGWKSFVAILDGIELNEEEERLAAK 180 (198)
T ss_dssp GGTCBTTBBCGG--GS-----CCTTCHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred HcCCCcccchHh--hC-----CCCccchHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 456653344444 32 35667888999999999999999998877643
No 22
>1ixs_A Holliday junction DNA helicase RUVA; heterodimeric protein complex, AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ANP; 3.20A {Thermus thermophilus} SCOP: a.5.1.1
Probab=55.99 E-value=11 Score=21.10 Aligned_cols=26 Identities=0% Similarity=-0.192 Sum_probs=21.2
Q ss_pred hhHHHHHhhccCCCChHHHHHHHHHH
Q psy18112 75 IFPSSRRDYDPTDEPLREEDRIWFRE 100 (107)
Q Consensus 75 ~f~~l~~al~~lGf~~~e~~~I~~il 100 (107)
..++...||..|||++.|...+.+-+
T Consensus 16 ~~~ea~~AL~aLGY~~~ea~kav~~v 41 (62)
T 1ixs_A 16 AAEEAVMALAALGFKEAQARAVVLDL 41 (62)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 34679999999999999988766543
No 23
>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=55.01 E-value=6.3 Score=22.94 Aligned_cols=31 Identities=0% Similarity=-0.233 Sum_probs=23.6
Q ss_pred CchhhhhHHHHHhhccCCCChHHHHHHHHHH
Q psy18112 70 TSVDTIFPSSRRDYDPTDEPLREEDRIWFRE 100 (107)
Q Consensus 70 ~~d~~~f~~l~~al~~lGf~~~e~~~I~~il 100 (107)
..+...+++.++-|..|||+.++....++..
T Consensus 23 ~~~~~~~ee~I~~L~eMGF~r~~a~~AL~~~ 53 (73)
T 1vg5_A 23 QGRVAASEEQIQKLVAMGFDRTQVEVALAAA 53 (73)
T ss_dssp CCCSCCCHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred ccCCcccHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 3455677778888889999999887766644
No 24
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=54.34 E-value=5 Score=22.26 Aligned_cols=22 Identities=5% Similarity=-0.064 Sum_probs=17.4
Q ss_pred hhhhhHHHHHhhccCCCChHHH
Q psy18112 72 VDTIFPSSRRDYDPTDEPLREE 93 (107)
Q Consensus 72 d~~~f~~l~~al~~lGf~~~e~ 93 (107)
..+.|+.-.+.|..|||++++.
T Consensus 13 pe~~~~~qi~~L~~MGF~d~~~ 34 (58)
T 1wr1_B 13 PEERYEHQLRQLNDMGFFDFDR 34 (58)
T ss_dssp HHHHTHHHHHHHHHHTCCCHHH
T ss_pred hHHHHHHHHHHHHHcCCCcHHH
Confidence 4578888899999999975543
No 25
>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=54.19 E-value=8.2 Score=20.40 Aligned_cols=25 Identities=0% Similarity=-0.221 Sum_probs=19.0
Q ss_pred hhHHHHHhhccCCCChHHHHHHHHH
Q psy18112 75 IFPSSRRDYDPTDEPLREEDRIWFR 99 (107)
Q Consensus 75 ~f~~l~~al~~lGf~~~e~~~I~~i 99 (107)
.+++..+.|..|||++++.....+.
T Consensus 7 ~~~~~i~~L~~MGF~~~~a~~AL~~ 31 (49)
T 1ify_A 7 EYETMLTEIMSMGYERERVVAALRA 31 (49)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred cCHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4566778888899998887766654
No 26
>2lr2_A Immunoglobulin G-binding protein A; Z domain, lanthanide binding TAG, de novo protein; NMR {Artificial gene}
Probab=52.97 E-value=11 Score=22.44 Aligned_cols=19 Identities=16% Similarity=0.106 Sum_probs=11.7
Q ss_pred CChHHHHHHHHHHhcCCCC
Q psy18112 88 EPLREEDRIWFREELGKLN 106 (107)
Q Consensus 88 f~~~e~~~I~~il~~~~~~ 106 (107)
|..+++...+.|+.|-|||
T Consensus 18 fnk~qqnAfyEIl~lPNLn 36 (88)
T 2lr2_A 18 FNKEQQNAFYEILHLPNLN 36 (88)
T ss_dssp CCHHHHHHHHHHHTCSSCC
T ss_pred hhHHHHHHHHHHHhCCCCC
Confidence 5555666666666666665
No 27
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=51.51 E-value=7 Score=22.46 Aligned_cols=23 Identities=4% Similarity=-0.086 Sum_probs=18.7
Q ss_pred chhhhhHHHHHhhccCCCChHHH
Q psy18112 71 SVDTIFPSSRRDYDPTDEPLREE 93 (107)
Q Consensus 71 ~d~~~f~~l~~al~~lGf~~~e~ 93 (107)
...+.|+.-...|..|||++.+.
T Consensus 14 ~pe~~y~~ql~qL~~MGF~d~~a 36 (67)
T 2dna_A 14 APEVRFSKEMECLQAMGFVNYNA 36 (67)
T ss_dssp CHHHHTHHHHHHHHHHTCCCHHH
T ss_pred ChHHHHHHHHHHHHHcCCCcHHH
Confidence 35678999999999999987654
No 28
>1l6x_B Minimized B-domain of protein A Z34C; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: k.13.1.1 PDB: 1oqo_C* 1oqx_C* 1zdc_A 1zdd_A
Probab=50.75 E-value=15 Score=18.18 Aligned_cols=18 Identities=17% Similarity=0.145 Sum_probs=8.9
Q ss_pred ChHHHHHHHHHHhcCCCC
Q psy18112 89 PLREEDRIWFREELGKLN 106 (107)
Q Consensus 89 ~~~e~~~I~~il~~~~~~ 106 (107)
+..++...+.||.+-+|+
T Consensus 2 ~~~qQnaFYevLh~~nLt 19 (34)
T 1l6x_B 2 NMQCQRRFYEALHDPNLN 19 (34)
T ss_dssp CHHHHHHHHHHHHCTTCC
T ss_pred CHHHHHHHHHHHcCCCCC
Confidence 344455555555555443
No 29
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B
Probab=50.02 E-value=12 Score=20.06 Aligned_cols=25 Identities=4% Similarity=-0.035 Sum_probs=17.3
Q ss_pred hhhhHHHHHhhccCCC-ChHHHHHHH
Q psy18112 73 DTIFPSSRRDYDPTDE-PLREEDRIW 97 (107)
Q Consensus 73 ~~~f~~l~~al~~lGf-~~~e~~~I~ 97 (107)
...|+.-.+.|..||| +.+......
T Consensus 9 ~~~~~~~l~~L~~MGF~~~~~~~~AL 34 (52)
T 2jy5_A 9 EVRFQQQLEQLSAMGFLNREANLQAL 34 (52)
T ss_dssp TTTTHHHHHHHHHTTCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 4578888899999999 544433333
No 30
>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=49.54 E-value=4.8 Score=21.95 Aligned_cols=20 Identities=15% Similarity=0.011 Sum_probs=15.5
Q ss_pred hhhHHHHHhhccCCCChHHH
Q psy18112 74 TIFPSSRRDYDPTDEPLREE 93 (107)
Q Consensus 74 ~~f~~l~~al~~lGf~~~e~ 93 (107)
..|+.-.+.|..|||++++.
T Consensus 7 ~~~~~~l~~L~~MGF~d~~~ 26 (54)
T 2dah_A 7 GHFQVQLEQLRSMGFLNREA 26 (54)
T ss_dssp CSSHHHHHHHHHHTCCCHHH
T ss_pred hhHHHHHHHHHHcCCCcHHH
Confidence 46777788899999987663
No 31
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=48.75 E-value=13 Score=21.38 Aligned_cols=28 Identities=14% Similarity=0.290 Sum_probs=21.1
Q ss_pred hhHHHHHhhccCCCChHHHHHHHHHHhc
Q psy18112 75 IFPSSRRDYDPTDEPLREEDRIWFREEL 102 (107)
Q Consensus 75 ~f~~l~~al~~lGf~~~e~~~I~~il~~ 102 (107)
..+++..+|..+|++.++...||..+..
T Consensus 27 ~~~el~~~l~~~g~~~~~~~~i~~~~D~ 54 (92)
T 1fi6_A 27 PGSAAKEFFTKSKLPILELSHIWELSDF 54 (92)
T ss_dssp EHHHHHHHHHHHSSCHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHCC
Confidence 3455666777779999999999987743
No 32
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=48.57 E-value=19 Score=22.72 Aligned_cols=28 Identities=14% Similarity=0.184 Sum_probs=23.5
Q ss_pred hhHHHHHhhccCCCChHHHHHHHHHHhc
Q psy18112 75 IFPSSRRDYDPTDEPLREEDRIWFREEL 102 (107)
Q Consensus 75 ~f~~l~~al~~lGf~~~e~~~I~~il~~ 102 (107)
.-++++..|...|+++++...||.+...
T Consensus 50 sg~elr~~~~~sgLp~~~L~~Iw~laD~ 77 (121)
T 3fia_A 50 TGDQARNFFFQSGLPQPVLAQIWALADM 77 (121)
T ss_dssp EHHHHHHHHGGGCCCHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHcC
Confidence 4466788888899999999999999854
No 33
>1j77_A HEMO, heme oxygenase; proximal histidine, distal helix, oxidoreductase; HET: HEM; 1.50A {Neisseria meningitidis} SCOP: a.132.1.2 PDB: 1p3t_A* 1p3u_A* 1p3v_A*
Probab=47.58 E-value=26 Score=23.84 Aligned_cols=45 Identities=7% Similarity=-0.013 Sum_probs=31.9
Q ss_pred HccCCCCccccccccCCccccccCCchhhhhHHHHHhhccCCCChHHHHHHH
Q psy18112 46 VVNMAEPMRFRFGRLQHTCYTVATTSVDTIFPSSRRDYDPTDEPLREEDRIW 97 (107)
Q Consensus 46 ~l~L~~~~~y~y~~l~~~~~~~~~~~d~~~f~~l~~al~~lGf~~~e~~~I~ 97 (107)
.++|++....+| +. ..+..+.+.|...+.+|+.+.++++++..|.
T Consensus 130 ~l~l~~~~g~~f--~~-----~~~~~~~~~w~~fr~~Ld~l~~d~~~~~~ii 174 (209)
T 1j77_A 130 KLDYNGEHGARH--LA-----PHPDGRGKHWRAFVEHLNALNLTPEAEAEAI 174 (209)
T ss_dssp TTTCBTTBBCGG--GS-----CCTTCHHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred HcCCCcccchhh--hC-----CCCcccHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 455553344445 32 3455677889999999999999999887764
No 34
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=44.77 E-value=13 Score=22.62 Aligned_cols=29 Identities=10% Similarity=0.125 Sum_probs=23.6
Q ss_pred hhhHHHHHhhccCCCChHHHHHHHHHHhc
Q psy18112 74 TIFPSSRRDYDPTDEPLREEDRIWFREEL 102 (107)
Q Consensus 74 ~~f~~l~~al~~lGf~~~e~~~I~~il~~ 102 (107)
-..+++..+|..+|++.+++..||+.+..
T Consensus 39 Is~~el~~~l~~~gl~~~el~~i~~~~D~ 67 (110)
T 1iq3_A 39 ISGSVAKNFFTKSKLSIPELSYIWELSDA 67 (110)
T ss_dssp EEHHHHHHHCCSSSCSSCCHHHHHHHHCS
T ss_pred EcHHHHHHHHHHcCCCHHHHHHHHHHHcC
Confidence 35667788888899999999999998743
No 35
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=44.46 E-value=22 Score=19.66 Aligned_cols=30 Identities=7% Similarity=-0.008 Sum_probs=24.4
Q ss_pred hhhhHHHHHhhccCCCChHHHHHHHHHHhc
Q psy18112 73 DTIFPSSRRDYDPTDEPLREEDRIWFREEL 102 (107)
Q Consensus 73 ~~~f~~l~~al~~lGf~~~e~~~I~~il~~ 102 (107)
..+|-.+...-+.+||+.+|+...+.+...
T Consensus 12 d~ewl~LI~~Ak~lGlsleEIrefL~l~~~ 41 (57)
T 1b0n_B 12 DQEWVELMVEAKEANISPEEIRKYLLLNKK 41 (57)
T ss_dssp CHHHHHHHHHHHHTTCCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHhcc
Confidence 467888999999999999999998876533
No 36
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=42.45 E-value=24 Score=22.71 Aligned_cols=29 Identities=10% Similarity=0.222 Sum_probs=23.5
Q ss_pred hhhHHHHHhhccCCCChHHHHHHHHHHhc
Q psy18112 74 TIFPSSRRDYDPTDEPLREEDRIWFREEL 102 (107)
Q Consensus 74 ~~f~~l~~al~~lGf~~~e~~~I~~il~~ 102 (107)
-...++..+|..+|++.+++..||..+..
T Consensus 67 Is~~El~~~l~~~gl~~~el~~I~~~~D~ 95 (139)
T 2jq6_A 67 ITGANAKKEMVKSKLPNTVLGKIWKLADV 95 (139)
T ss_dssp EEHHHHHHHHHHTTCCHHHHHHHHHHHCS
T ss_pred ECHHHHHHHHHHhCcCHHHHHHHHHHhCC
Confidence 35567778888899999999999998854
No 37
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=41.81 E-value=11 Score=23.53 Aligned_cols=20 Identities=5% Similarity=-0.017 Sum_probs=16.2
Q ss_pred hhhhHHHHHhhccCCCChHH
Q psy18112 73 DTIFPSSRRDYDPTDEPLRE 92 (107)
Q Consensus 73 ~~~f~~l~~al~~lGf~~~e 92 (107)
...|+.-.+.|..|||++++
T Consensus 63 e~~~~~qL~qL~eMGF~d~~ 82 (108)
T 2cwb_A 63 GSQWQPQLQQLRDMGIQDDE 82 (108)
T ss_dssp CCTTHHHHHHHHTTTCCCHH
T ss_pred ccchHHHHHHHHHcCCCCHH
Confidence 35788888999999997654
No 38
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=41.60 E-value=27 Score=18.84 Aligned_cols=27 Identities=7% Similarity=-0.104 Sum_probs=20.4
Q ss_pred hhHHHHHhhccCC---CChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTD---EPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lG---f~~~e~~~I~~il~ 101 (107)
...++..+|..+| ++++++..+|+.+.
T Consensus 26 ~~~el~~~l~~~g~~~~~~~~~~~~~~~~D 55 (81)
T 1c7v_A 26 DFDEFKFIMQKVGEEPLTDAEVEEAMKEAD 55 (81)
T ss_dssp CHHHHHHHSSTTTTCCCCHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhCCCCCCHHHHHHHHHHhC
Confidence 4566677777777 77888888888774
No 39
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=40.79 E-value=9.1 Score=22.34 Aligned_cols=21 Identities=5% Similarity=0.094 Sum_probs=16.5
Q ss_pred hhhhhHHHHHhhccCCCChHH
Q psy18112 72 VDTIFPSSRRDYDPTDEPLRE 92 (107)
Q Consensus 72 d~~~f~~l~~al~~lGf~~~e 92 (107)
....|+.-.+-|..|||++++
T Consensus 25 pe~~ye~qi~qL~eMGF~dr~ 45 (74)
T 1vej_A 25 TEGRYQQELEELKALGFANRD 45 (74)
T ss_dssp TTTTSHHHHHHHHHHTCCCHH
T ss_pred chHHHHHHHHHHHHcCCCcHH
Confidence 356788888999999996544
No 40
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=40.13 E-value=23 Score=26.02 Aligned_cols=30 Identities=13% Similarity=0.083 Sum_probs=27.0
Q ss_pred cCCchhhhhHHHHHhhccCCCChHHHHHHH
Q psy18112 68 ATTSVDTIFPSSRRDYDPTDEPLREEDRIW 97 (107)
Q Consensus 68 ~~~~d~~~f~~l~~al~~lGf~~~e~~~I~ 97 (107)
++..|...|..+.++|..-|++++++..|+
T Consensus 282 ~gl~~~~~~~~l~~~L~~~G~se~~i~ki~ 311 (325)
T 2i5g_A 282 LGIRTVGEFPNLTETLLKRGMPERVVRKVM 311 (325)
T ss_dssp BTCSSGGGTHHHHHHHHHTTCCHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 456788999999999999999999999886
No 41
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=37.81 E-value=37 Score=17.24 Aligned_cols=27 Identities=4% Similarity=-0.153 Sum_probs=18.6
Q ss_pred hhHHHHHhhccCC--CChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTD--EPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lG--f~~~e~~~I~~il~ 101 (107)
...++..++..+| ++++++..+|+.+.
T Consensus 19 ~~~el~~~l~~~~~~~~~~~~~~~~~~~D 47 (67)
T 1tiz_A 19 SLDEFREVALAFSPYFTQEDIVKFFEEID 47 (67)
T ss_dssp EHHHHHHHHHHTCTTSCHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHHC
Confidence 3445556666665 67888888888774
No 42
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=36.81 E-value=39 Score=17.44 Aligned_cols=27 Identities=19% Similarity=0.148 Sum_probs=19.0
Q ss_pred hhHHHHHhhccCC--CChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTD--EPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lG--f~~~e~~~I~~il~ 101 (107)
...++..++..+| ++++++..+|+.+.
T Consensus 24 ~~~el~~~l~~~~~~~~~~~~~~~~~~~d 52 (71)
T 2b1u_A 24 TVDELRRAMAGLGQPLPQEELDAMIREAD 52 (71)
T ss_dssp EHHHHHHHGGGTTCSSCHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 3455666777776 67888888888764
No 43
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=36.40 E-value=40 Score=18.34 Aligned_cols=28 Identities=7% Similarity=-0.096 Sum_probs=18.7
Q ss_pred hhHHHHHhhccCC-CChHHHHHHHHHHhc
Q psy18112 75 IFPSSRRDYDPTD-EPLREEDRIWFREEL 102 (107)
Q Consensus 75 ~f~~l~~al~~lG-f~~~e~~~I~~il~~ 102 (107)
...++..++..+| ++++++..+|+.+..
T Consensus 29 ~~~el~~~l~~~g~~~~~~~~~~~~~~D~ 57 (86)
T 2opo_A 29 SSSELGDALKTLGSVTPDEVRRMMAEIDT 57 (86)
T ss_dssp EHHHHHHHHHTTTTCCHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHcCCCCHHHHHHHHHHhCC
Confidence 3444555555555 788888888888743
No 44
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=36.08 E-value=26 Score=26.32 Aligned_cols=30 Identities=7% Similarity=-0.093 Sum_probs=26.8
Q ss_pred cCCchhhhhHHHHHhhccCCCChHHHHHHH
Q psy18112 68 ATTSVDTIFPSSRRDYDPTDEPLREEDRIW 97 (107)
Q Consensus 68 ~~~~d~~~f~~l~~al~~lGf~~~e~~~I~ 97 (107)
.+..|...|..+.++|..-|++++++..|+
T Consensus 297 ~gl~d~~~~p~l~~~L~~~G~se~~i~ki~ 326 (369)
T 1itu_A 297 EGLEDVSKYPDLIAELLRRNWTEAEVKGAL 326 (369)
T ss_dssp BTCSSTTCHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 366788999999999999999999999875
No 45
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=36.06 E-value=29 Score=26.49 Aligned_cols=32 Identities=13% Similarity=0.090 Sum_probs=28.2
Q ss_pred ccCCchhhhhHHHHHhhccCCCChHHHHHHHH
Q psy18112 67 VATTSVDTIFPSSRRDYDPTDEPLREEDRIWF 98 (107)
Q Consensus 67 ~~~~~d~~~f~~l~~al~~lGf~~~e~~~I~~ 98 (107)
.++..|..+|..+.++|..-|++++++..|+.
T Consensus 367 ~~gl~dvs~~p~L~~~Ll~rG~se~di~ki~g 398 (417)
T 2rag_A 367 MDGFEDITDLPKITARLKAEGYSDADIEAIWS 398 (417)
T ss_dssp BBTBSSGGGTHHHHHHHHHTTCCHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 35678999999999999999999999998763
No 46
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=36.05 E-value=37 Score=20.69 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=22.5
Q ss_pred hhhHHHHHhhccCCCChHHHHHHHHHHh
Q psy18112 74 TIFPSSRRDYDPTDEPLREEDRIWFREE 101 (107)
Q Consensus 74 ~~f~~l~~al~~lGf~~~e~~~I~~il~ 101 (107)
-...++..+|..+|.+++++..+++-+.
T Consensus 63 I~~~El~~~l~~lG~t~~ei~~~~~~~D 90 (123)
T 2kld_A 63 LNFDELRQDLKGKGHTDAEIEAIFTKYD 90 (123)
T ss_dssp EEHHHHHHHTTTCCSSHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHhCCCHHHHHHHHHHHc
Confidence 3566788889999998889998888763
No 47
>1j02_A Heme oxygenase 1; alpha helix, O2-analog bound form, oxidoreductase; HET: HEM; 1.70A {Rattus norvegicus} SCOP: a.132.1.1 PDB: 1irm_C 1dve_A* 1ix3_A* 1ivj_A* 1ix4_A* 1j2c_A* 1ubb_A* 1ulx_A* 1vgi_A* 2dy5_A* 2e7e_A* 2zvu_A* 1dvg_A* 3i9t_A* 3i9u_A*
Probab=35.88 E-value=79 Score=22.40 Aligned_cols=48 Identities=8% Similarity=0.051 Sum_probs=31.7
Q ss_pred HHHccCCC-CccccccccCCccccccCCchhhh-hHHHHHhhccCCCChHHHHHHHH
Q psy18112 44 LRVVNMAE-PMRFRFGRLQHTCYTVATTSVDTI-FPSSRRDYDPTDEPLREEDRIWF 98 (107)
Q Consensus 44 ~~~l~L~~-~~~y~y~~l~~~~~~~~~~~d~~~-f~~l~~al~~lGf~~~e~~~I~~ 98 (107)
.+.++|.+ ....+| +. .++..|.+. +...+++|+.++++++++..|..
T Consensus 152 ~k~lgL~~~~~gl~F--y~-----f~g~~d~~~~k~~fr~~Ld~l~ld~ee~~~iI~ 201 (267)
T 1j02_A 152 QKAMALPSSGEGLAF--FT-----FPSIDNPTKFKQLYRARMNTLEMTPEVKHRVTE 201 (267)
T ss_dssp HHHHTCCTTCTTCGG--GC-----CTTCSCHHHHHHHHHHHHTTSCCCHHHHHHHHH
T ss_pred HHhcCCCCCCCccee--ec-----cCCcCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 34577763 344455 32 344445554 67789999999999999887653
No 48
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=35.75 E-value=33 Score=21.68 Aligned_cols=28 Identities=7% Similarity=-0.122 Sum_probs=22.5
Q ss_pred hhhHHHHHhhccCCCChHHHHHHHHHHh
Q psy18112 74 TIFPSSRRDYDPTDEPLREEDRIWFREE 101 (107)
Q Consensus 74 ~~f~~l~~al~~lGf~~~e~~~I~~il~ 101 (107)
-.+.++..+|..+|++++++..+|..+.
T Consensus 56 i~~~El~~~l~~~g~~~~~~~~~~~~~D 83 (180)
T 3mse_B 56 LSHREIYTVLASVGIKKWDINRILQALD 83 (180)
T ss_dssp EEHHHHHHHHHHTTCCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHHhC
Confidence 3566677888889999999999998874
No 49
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=34.68 E-value=42 Score=18.52 Aligned_cols=27 Identities=7% Similarity=-0.111 Sum_probs=19.0
Q ss_pred hhHHHHHhhccCC--CChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTD--EPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lG--f~~~e~~~I~~il~ 101 (107)
...++..+|..+| ++++++..+|..+.
T Consensus 27 ~~~el~~~l~~~g~~~~~~~~~~l~~~~d 55 (92)
T 2kn2_A 27 SASELRHVMINLGEKLTDEEVEQMIKEAD 55 (92)
T ss_dssp CHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 3445556666666 67888888888774
No 50
>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1
Probab=34.56 E-value=38 Score=16.31 Aligned_cols=24 Identities=8% Similarity=-0.172 Sum_probs=15.6
Q ss_pred hHHHHHhhccCCCChHHHHHHHHH
Q psy18112 76 FPSSRRDYDPTDEPLREEDRIWFR 99 (107)
Q Consensus 76 f~~l~~al~~lGf~~~e~~~I~~i 99 (107)
+++..+-|..+||+.++....++-
T Consensus 4 ~~~~i~~L~~mGf~~~~a~~AL~~ 27 (40)
T 1z96_A 4 LNSKIAQLVSMGFDPLEAAQALDA 27 (40)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHH
Confidence 344556666779998877655443
No 51
>3ezq_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS, membrane,receptor, transmembrane; 2.73A {Homo sapiens} SCOP: a.77.1.2 PDB: 1ddf_A
Probab=33.95 E-value=15 Score=23.15 Aligned_cols=29 Identities=10% Similarity=-0.102 Sum_probs=22.7
Q ss_pred CCchhhhhHHHHHhhccCCCChHHHHHHH
Q psy18112 69 TTSVDTIFPSSRRDYDPTDEPLREEDRIW 97 (107)
Q Consensus 69 ~~~d~~~f~~l~~al~~lGf~~~e~~~I~ 97 (107)
.+.+.-.+.+.++.+..+|+++.+++.|-
T Consensus 13 ~Iae~m~~~~wK~laR~LGlse~~Id~I~ 41 (115)
T 3ezq_A 13 TIAGVMTLSQVKGFVRKNGVNEAKIDEIK 41 (115)
T ss_dssp HHHHTSCHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHcCHHHHHHHHHHcCCCHhhHHHHH
Confidence 34455567788899999999999998764
No 52
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=33.90 E-value=27 Score=26.25 Aligned_cols=30 Identities=7% Similarity=-0.081 Sum_probs=26.7
Q ss_pred cCCchhhhhHHHHHhhccCCCChHHHHHHH
Q psy18112 68 ATTSVDTIFPSSRRDYDPTDEPLREEDRIW 97 (107)
Q Consensus 68 ~~~~d~~~f~~l~~al~~lGf~~~e~~~I~ 97 (107)
++..|..+|..+.++|..=|++++++..|+
T Consensus 314 ~gl~d~s~~p~L~~~L~~rG~se~~i~ki~ 343 (364)
T 3ly0_A 314 QGIADVTGLPALQAAMRAHGYDEPLMRKLC 343 (364)
T ss_dssp TTTCSGGGHHHHHHHHHHHTCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 456789999999999999999999999875
No 53
>1wov_A Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: HEM; 1.75A {Synechocystis SP} SCOP: a.132.1.1 PDB: 1wow_A* 1wox_A*
Probab=33.43 E-value=99 Score=21.55 Aligned_cols=48 Identities=8% Similarity=-0.066 Sum_probs=30.9
Q ss_pred HHHccCCCCccccccccCCccccccCCc---hhh-hhHHHHHhhccCCCChHHHHHHHH
Q psy18112 44 LRVVNMAEPMRFRFGRLQHTCYTVATTS---VDT-IFPSSRRDYDPTDEPLREEDRIWF 98 (107)
Q Consensus 44 ~~~l~L~~~~~y~y~~l~~~~~~~~~~~---d~~-~f~~l~~al~~lGf~~~e~~~I~~ 98 (107)
.+.++|++....+| +. .+++. |.+ -++..+++|+.++++++++..|..
T Consensus 142 ~k~l~L~~~~g~~f--y~-----f~~~~~~~d~~~~k~~fr~~Ld~l~l~~~e~~~ii~ 193 (250)
T 1wov_A 142 RSALQLPEGEGTAM--YE-----FDSLPTPGDRRQFKEIYRDVLNSLPLDEATINRIVE 193 (250)
T ss_dssp HHHTTCCTTSSCGG--GC-----CTTCCSHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHhcCCCCccccee--ec-----cCCccccccHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 34577764444455 32 23333 544 467788999999999998877653
No 54
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=32.27 E-value=32 Score=26.13 Aligned_cols=30 Identities=3% Similarity=-0.095 Sum_probs=26.8
Q ss_pred cCCchhhhhHHHHHhhccCCCChHHHHHHH
Q psy18112 68 ATTSVDTIFPSSRRDYDPTDEPLREEDRIW 97 (107)
Q Consensus 68 ~~~~d~~~f~~l~~al~~lGf~~~e~~~I~ 97 (107)
.+..|..+|..+..+|..=|++++++..|+
T Consensus 329 ~gl~dvs~~p~L~~~L~~rG~se~di~ki~ 358 (400)
T 3id7_A 329 DGLGDVSGYPNLIAELLDRGWSQSDLAKLT 358 (400)
T ss_dssp BTCSSTTCHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhhcCCCHHHHHHHH
Confidence 466889999999999999999999999876
No 55
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=32.26 E-value=32 Score=21.73 Aligned_cols=28 Identities=7% Similarity=-0.084 Sum_probs=20.1
Q ss_pred hhHHHHHhhccCC--CChHHHHHHHHHHhc
Q psy18112 75 IFPSSRRDYDPTD--EPLREEDRIWFREEL 102 (107)
Q Consensus 75 ~f~~l~~al~~lG--f~~~e~~~I~~il~~ 102 (107)
...+++.+|..+| ++++++..+++....
T Consensus 103 ~~~el~~~l~~~g~~ls~~e~~~l~~~~D~ 132 (159)
T 3i5g_C 103 SSAEIRNVLKMLGERITEDQCNDIFTFCDI 132 (159)
T ss_dssp CHHHHHHHHHHSSSCCCHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhCc
Confidence 3445666777776 688889999887754
No 56
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=32.17 E-value=28 Score=26.56 Aligned_cols=32 Identities=6% Similarity=-0.028 Sum_probs=28.1
Q ss_pred ccCCchhhhhHHHHHhhccCCCChHHHHHHHH
Q psy18112 67 VATTSVDTIFPSSRRDYDPTDEPLREEDRIWF 98 (107)
Q Consensus 67 ~~~~~d~~~f~~l~~al~~lGf~~~e~~~I~~ 98 (107)
.++..|..+|..+.++|..-|++++++..|+.
T Consensus 366 ~~gl~dvs~~p~l~~~L~~rG~se~di~ki~g 397 (417)
T 3b40_A 366 VDGWKDVSEIRNVTAELITRGYSDADIAKLWG 397 (417)
T ss_dssp BBTBCSGGGHHHHHHHHHHHTCCHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 35678999999999999999999999998763
No 57
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=31.45 E-value=53 Score=17.67 Aligned_cols=27 Identities=4% Similarity=-0.177 Sum_probs=18.8
Q ss_pred hhHHHHHhhccCC--CChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTD--EPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lG--f~~~e~~~I~~il~ 101 (107)
...++..+|..+| ++++++..+|+.+.
T Consensus 32 ~~~el~~~l~~~g~~~~~~~~~~~~~~~d 60 (85)
T 2ktg_A 32 TAEELGTVMRALGANPTKQKISEIVKDYD 60 (85)
T ss_dssp EHHHHHHHHHTTSSCCCHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 4455566666666 67788888888774
No 58
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=31.08 E-value=55 Score=17.72 Aligned_cols=27 Identities=7% Similarity=-0.018 Sum_probs=20.0
Q ss_pred hhHHHHHhhccCC--CChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTD--EPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lG--f~~~e~~~I~~il~ 101 (107)
...++..+|..+| ++++++..+++.+.
T Consensus 41 ~~~el~~~l~~~~~~~~~~~~~~l~~~~d 69 (87)
T 1s6j_A 41 TFDELKDGLKRVGSELMESEIKDLMDAAD 69 (87)
T ss_dssp EHHHHHHHHHTTTSSCCHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 4556667777776 67888889988874
No 59
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=30.98 E-value=45 Score=20.40 Aligned_cols=28 Identities=4% Similarity=-0.174 Sum_probs=22.0
Q ss_pred hhhHHHHHhhccCCCChHHHHHHHHHHh
Q psy18112 74 TIFPSSRRDYDPTDEPLREEDRIWFREE 101 (107)
Q Consensus 74 ~~f~~l~~al~~lGf~~~e~~~I~~il~ 101 (107)
-.+.++..++..+|++++++..+|+.+.
T Consensus 119 I~~~e~~~~l~~~g~~~~~~~~~~~~~D 146 (176)
T 1nya_A 119 INADEFAAWLTALGMSKAEAAEAFNQVD 146 (176)
T ss_dssp EEHHHHHHHHHHTTCCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhCCCHHHHHHHHHHhC
Confidence 3456667777778899999999998874
No 60
>2q32_A Heme oxygenase 2, HO-2; structural genomics medical relevance, structural genomics community request, protein structure in PSI; HET: OXN; 2.40A {Homo sapiens} PDB: 2qpp_A* 2rgz_A*
Probab=30.59 E-value=88 Score=22.11 Aligned_cols=48 Identities=13% Similarity=0.131 Sum_probs=31.1
Q ss_pred HHHccCCC-CccccccccCCccccccCCchhh-hhHHHHHhhccCCCChHHHHHHHH
Q psy18112 44 LRVVNMAE-PMRFRFGRLQHTCYTVATTSVDT-IFPSSRRDYDPTDEPLREEDRIWF 98 (107)
Q Consensus 44 ~~~l~L~~-~~~y~y~~l~~~~~~~~~~~d~~-~f~~l~~al~~lGf~~~e~~~I~~ 98 (107)
.+.++|.+ ....+| +. .++..|.+ -++..+++|+.+.++++++..|..
T Consensus 172 ~k~lgL~~~~~g~~F--y~-----f~g~~d~~~~k~~fr~~Ld~l~ld~ee~~~iI~ 221 (264)
T 2q32_A 172 QRALKLPSTGEGTQF--YL-----FENVDNAQQFKQLYRARMNALDLNMKTKERIVE 221 (264)
T ss_dssp HHHHTCCTTCTTCGG--GC-----CTTCSCHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHhcCCCCCCcccee--ec-----cCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 34577763 344455 32 33444554 457788999999999999887653
No 61
>1dv0_A DNA repair protein HHR23A; helical bundle, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 1f4i_A
Probab=29.90 E-value=17 Score=18.97 Aligned_cols=22 Identities=9% Similarity=-0.016 Sum_probs=14.2
Q ss_pred HHHhhccCCCChHHHHHHHHHH
Q psy18112 79 SRRDYDPTDEPLREEDRIWFRE 100 (107)
Q Consensus 79 l~~al~~lGf~~~e~~~I~~il 100 (107)
..+-|..|||++......+.-.
T Consensus 7 aI~rL~~mGF~~~~a~~Al~a~ 28 (47)
T 1dv0_A 7 AIERLKALGFPESLVIQAYFAC 28 (47)
T ss_dssp HHTTTTTTTCCHHHHHHHHTTT
T ss_pred HHHHHHHcCCCHHHHHHHHHHc
Confidence 3466677788887766655433
No 62
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=29.83 E-value=50 Score=19.16 Aligned_cols=26 Identities=8% Similarity=-0.206 Sum_probs=20.8
Q ss_pred hHHHHHhhccCCCChHHHHHHHHHHh
Q psy18112 76 FPSSRRDYDPTDEPLREEDRIWFREE 101 (107)
Q Consensus 76 f~~l~~al~~lGf~~~e~~~I~~il~ 101 (107)
+-.....++.+|||-+|+..++....
T Consensus 5 rL~~I~~lr~lGfsL~eIk~~l~~~~ 30 (99)
T 1q08_A 5 RLKFIRHARQLGFSLESIRELLSIRI 30 (99)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHh
Confidence 34567889999999999999887643
No 63
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=28.34 E-value=37 Score=19.96 Aligned_cols=28 Identities=11% Similarity=-0.089 Sum_probs=19.3
Q ss_pred hhHHHHHhhccCC--CChHHHHHHHHHHhc
Q psy18112 75 IFPSSRRDYDPTD--EPLREEDRIWFREEL 102 (107)
Q Consensus 75 ~f~~l~~al~~lG--f~~~e~~~I~~il~~ 102 (107)
...++..+|..+| ++++++..+++.+..
T Consensus 54 ~~~El~~~l~~lg~~~~~~ei~~l~~~~D~ 83 (100)
T 2lv7_A 54 SKQELGTAMRSLGYMPNEVELEVIIQRLDM 83 (100)
T ss_dssp CHHHHHHHHHHHTCCCCTTTHHHHHHHHCS
T ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHHHCC
Confidence 4455566666666 577888888887743
No 64
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=28.04 E-value=40 Score=20.83 Aligned_cols=28 Identities=0% Similarity=-0.168 Sum_probs=22.9
Q ss_pred hhhHHHHHhhccCCCChHHHHHHHHHHh
Q psy18112 74 TIFPSSRRDYDPTDEPLREEDRIWFREE 101 (107)
Q Consensus 74 ~~f~~l~~al~~lGf~~~e~~~I~~il~ 101 (107)
-.++++..++..+|++++++..+|+.+.
T Consensus 122 Is~~E~~~~l~~~g~~~~~~~~~~~~~D 149 (185)
T 2sas_A 122 VDLEEFQNYCKNFQLQCADVPAVYNVIT 149 (185)
T ss_dssp CCHHHHHHHTTSSCCCCSSHHHHHHHHH
T ss_pred EcHHHHHHHHHHhCCCHHHHHHHHHHhc
Confidence 4566777888888999999999998874
No 65
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=28.00 E-value=58 Score=19.57 Aligned_cols=27 Identities=7% Similarity=-0.029 Sum_probs=21.0
Q ss_pred hhHHHHHhhccCCCChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTDEPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lGf~~~e~~~I~~il~ 101 (107)
.+.++..++..+|++++++..+|+.+.
T Consensus 116 ~~~E~~~~l~~~~~~~~~~~~~~~~~D 142 (166)
T 3akb_A 116 TVADTARALTAFGVPEDLARQAAAALD 142 (166)
T ss_dssp BHHHHHHHHHHTTCCHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhCCCHHHHHHHHHHhC
Confidence 455666777777899999999998874
No 66
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=27.73 E-value=20 Score=19.65 Aligned_cols=21 Identities=5% Similarity=-0.290 Sum_probs=15.5
Q ss_pred hhhHHHHHhhccCCCChHHHH
Q psy18112 74 TIFPSSRRDYDPTDEPLREED 94 (107)
Q Consensus 74 ~~f~~l~~al~~lGf~~~e~~ 94 (107)
+.|....+-|.-|||.+.+..
T Consensus 7 e~~a~~L~~L~eMGF~D~~~N 27 (54)
T 2cp8_A 7 GQTAALMAHLFEMGFCDRQLN 27 (54)
T ss_dssp TTHHHHHHHHHHHTCCCHHHH
T ss_pred HhhHHHHHHHHHcCCCcHHHH
Confidence 567767788888999776543
No 67
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=27.18 E-value=64 Score=20.20 Aligned_cols=28 Identities=11% Similarity=-0.098 Sum_probs=21.8
Q ss_pred hhhHHHHHhhccCCCChHHHHHHHHHHh
Q psy18112 74 TIFPSSRRDYDPTDEPLREEDRIWFREE 101 (107)
Q Consensus 74 ~~f~~l~~al~~lGf~~~e~~~I~~il~ 101 (107)
-.+.++..++..+|++++++..+|+.+.
T Consensus 126 I~~~E~~~~l~~~g~~~~~~~~~~~~~D 153 (191)
T 2ccm_A 126 IDKHEYSTVYMSYGIPKSDCDAAFDTLS 153 (191)
T ss_dssp CCHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHhCCCHHHHHHHHHHhC
Confidence 3456666777778899999999999874
No 68
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=26.18 E-value=69 Score=19.01 Aligned_cols=28 Identities=18% Similarity=0.266 Sum_probs=20.7
Q ss_pred hhHHHHHhhccCCCChHHHHHHHHHHhc
Q psy18112 75 IFPSSRRDYDPTDEPLREEDRIWFREEL 102 (107)
Q Consensus 75 ~f~~l~~al~~lGf~~~e~~~I~~il~~ 102 (107)
...++..+|...+++.+++..||+.+..
T Consensus 32 ~~~El~~~l~~~~~~~~~~~~i~~~~D~ 59 (111)
T 2kgr_A 32 TGPQARTILMQSSLPQAQLASIWNLSDI 59 (111)
T ss_dssp EHHHHHHHHHTTCCCHHHHHHHHHHHCS
T ss_pred cHHHHHHHHHhCCCCHHHHHHHHHHHCC
Confidence 4455666666778999999999987743
No 69
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=26.05 E-value=46 Score=20.37 Aligned_cols=27 Identities=0% Similarity=-0.319 Sum_probs=19.7
Q ss_pred hhHHHHHhhccCCCChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTDEPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lGf~~~e~~~I~~il~ 101 (107)
...++..++..+|++++++..+|+.+.
T Consensus 112 ~~~e~~~~l~~~g~~~~~~~~~~~~~D 138 (174)
T 1q80_A 112 SRDEYGIFFGMLGLDKTMAPASFDAID 138 (174)
T ss_dssp CHHHHHHHHHHHTCCGGGHHHHHHHHC
T ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHhC
Confidence 344455556566899999999998874
No 70
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=25.83 E-value=57 Score=20.87 Aligned_cols=29 Identities=3% Similarity=-0.149 Sum_probs=23.7
Q ss_pred hhhHHHHHhhccCCCChHHHHHHHHHHhc
Q psy18112 74 TIFPSSRRDYDPTDEPLREEDRIWFREEL 102 (107)
Q Consensus 74 ~~f~~l~~al~~lGf~~~e~~~I~~il~~ 102 (107)
-...++..+|..+|++++++..+|+.+..
T Consensus 99 Is~~El~~~l~~~g~~~~~~~~~~~~~D~ 127 (188)
T 1s6i_A 99 ITLDEIQQACKDFGLDDIHIDDMIKEIDQ 127 (188)
T ss_dssp EEHHHHHHTTTTTTCCTTHHHHHHHHHCS
T ss_pred CcHHHHHHHHHHcCCCHHHHHHHHHHHCC
Confidence 45677788888999999999999988743
No 71
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=24.37 E-value=82 Score=17.21 Aligned_cols=27 Identities=11% Similarity=-0.150 Sum_probs=18.4
Q ss_pred hhHHHHHhhccCC--CChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTD--EPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lG--f~~~e~~~I~~il~ 101 (107)
...++..++..+| ++++++..+|..+.
T Consensus 38 ~~~el~~~l~~~g~~~~~~~~~~l~~~~D 66 (90)
T 1avs_A 38 STKELGTVMRMLGQNPTKEELDAIIEEVD 66 (90)
T ss_dssp CHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 3445556666666 56788888888774
No 72
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=24.30 E-value=75 Score=15.70 Aligned_cols=22 Identities=5% Similarity=-0.103 Sum_probs=14.9
Q ss_pred HHHhhccCCCChHHHHHHHHHH
Q psy18112 79 SRRDYDPTDEPLREEDRIWFRE 100 (107)
Q Consensus 79 l~~al~~lGf~~~e~~~I~~il 100 (107)
..+-|..|||++++....++..
T Consensus 7 ~i~~L~~MGF~~~~a~~AL~~~ 28 (43)
T 2g3q_A 7 AVEELSGMGFTEEEAHNALEKC 28 (43)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHh
Confidence 4566777899988766655543
No 73
>2fwt_A DHC, diheme cytochrome C; diheme protein, electron transfer, sphaeroides heme protein, oxygen-binding, electron transpor; HET: HEM; 1.85A {Rhodobacter sphaeroides}
Probab=24.16 E-value=82 Score=19.95 Aligned_cols=33 Identities=9% Similarity=-0.119 Sum_probs=28.3
Q ss_pred cCCchhhhhHHHHHhhc-----cCCCChHHHHHHHHHH
Q psy18112 68 ATTSVDTIFPSSRRDYD-----PTDEPLREEDRIWFRE 100 (107)
Q Consensus 68 ~~~~d~~~f~~l~~al~-----~lGf~~~e~~~I~~il 100 (107)
++.-.+..|..+.+.|+ -..+++++...|++-|
T Consensus 22 p~~lpa~sW~~il~~m~~HfG~~a~Ld~~~~~~I~~YL 59 (125)
T 2fwt_A 22 AALLPARSWTALMADLPNHFGEDASLDEASRGQIESYL 59 (125)
T ss_dssp GGGSCHHHHHHHHTTGGGBTTBCCCCCHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHhcccccCCCHHHHHHHHHHH
Confidence 34567899999999998 5789999999999877
No 74
>1wzd_A Heme oxygenase; electron-transfer, artificial metalloprotein; HET: YOK; 1.35A {Corynebacterium diphtheriae} SCOP: a.132.1.1 PDB: 1iw1_A* 1v8x_A* 1iw0_A* 1wzf_A* 1wzg_A* 2z68_A* 3i8r_A* 3moo_A* 1wnw_A* 1wnx_A* 1wnv_A*
Probab=23.72 E-value=78 Score=21.35 Aligned_cols=31 Identities=3% Similarity=-0.016 Sum_probs=23.7
Q ss_pred cCCch-hhhhHHHHHhhccCCCChHHHHHHHH
Q psy18112 68 ATTSV-DTIFPSSRRDYDPTDEPLREEDRIWF 98 (107)
Q Consensus 68 ~~~~d-~~~f~~l~~al~~lGf~~~e~~~I~~ 98 (107)
++..| ..-|+..+.+|+.+.++++++..|..
T Consensus 164 ~~~~~~~~~~~~fr~~Ld~~~~~~~~~~~ii~ 195 (215)
T 1wzd_A 164 EGIAKLKVYKDEYREKLNNLELSDEQREHLLK 195 (215)
T ss_dssp TTCSCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 44434 56788889999999999998877643
No 75
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=23.58 E-value=63 Score=18.27 Aligned_cols=26 Identities=12% Similarity=-0.032 Sum_probs=17.5
Q ss_pred hHHHHHhhccCC--CChHHHHHHHHHHh
Q psy18112 76 FPSSRRDYDPTD--EPLREEDRIWFREE 101 (107)
Q Consensus 76 f~~l~~al~~lG--f~~~e~~~I~~il~ 101 (107)
..++..+|..+| ++++++..+|+.+.
T Consensus 48 ~~El~~~l~~~g~~~~~~e~~~l~~~~D 75 (94)
T 2kz2_A 48 AAELRHVMTNLGEKLTDEEVDEMIREAD 75 (94)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 344455555555 67888888888774
No 76
>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=23.27 E-value=27 Score=19.95 Aligned_cols=24 Identities=8% Similarity=-0.208 Sum_probs=17.3
Q ss_pred HHHHHhhccCCCChHHHHHHHHHH
Q psy18112 77 PSSRRDYDPTDEPLREEDRIWFRE 100 (107)
Q Consensus 77 ~~l~~al~~lGf~~~e~~~I~~il 100 (107)
.+.++.|..|||+.++....++..
T Consensus 30 ~~~v~~L~~MGF~~~~a~~AL~~t 53 (73)
T 1wiv_A 30 QSSVDTLLSFGFAEDVARKALKAS 53 (73)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHh
Confidence 345677778899998877766654
No 77
>1ich_A TNF-1, tumor necrosis factor receptor-1; death domain, apoptosis; NMR {Homo sapiens} SCOP: a.77.1.2
Probab=22.76 E-value=26 Score=22.00 Aligned_cols=23 Identities=13% Similarity=-0.189 Sum_probs=17.8
Q ss_pred hhHHHHHhhccCCCChHHHHHHH
Q psy18112 75 IFPSSRRDYDPTDEPLREEDRIW 97 (107)
Q Consensus 75 ~f~~l~~al~~lGf~~~e~~~I~ 97 (107)
.+...++.+..||+++.+++.|-
T Consensus 24 ~~~~WK~~aRkLGLse~~Id~Ie 46 (112)
T 1ich_A 24 PPLRWKEFVKRLGLSDHEIDRLE 46 (112)
T ss_dssp CSTTHHHHHHHHTCCHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHH
Confidence 34456677889999999998764
No 78
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=22.29 E-value=88 Score=17.86 Aligned_cols=27 Identities=11% Similarity=-0.048 Sum_probs=19.3
Q ss_pred hhHHHHHhhccCC--CChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTD--EPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lG--f~~~e~~~I~~il~ 101 (107)
...++..++..+| ++++++..++..+.
T Consensus 50 ~~~el~~~l~~~g~~~~~~~~~~l~~~~D 78 (107)
T 2d58_A 50 DIMSLKRMLEKLGVPKTHLELKKLIGEVS 78 (107)
T ss_dssp EHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 4455666777776 67888888888774
No 79
>1zda_A Mini protein A domain, Z38; IGG binding domain, protein A mimic; NMR {Synthetic construct} SCOP: k.13.1.1 PDB: 1zdb_A
Probab=22.17 E-value=37 Score=17.18 Aligned_cols=15 Identities=0% Similarity=-0.004 Sum_probs=8.0
Q ss_pred HhhccCCCChHHHHH
Q psy18112 81 RDYDPTDEPLREEDR 95 (107)
Q Consensus 81 ~al~~lGf~~~e~~~ 95 (107)
+.|..=+++++++..
T Consensus 16 evLh~~nLtEeQrn~ 30 (38)
T 1zda_A 16 EALHDPNLNEEQRNA 30 (38)
T ss_dssp HHHSCSSSCTTHHHH
T ss_pred HHHcCCCCCHHHHHh
Confidence 344555566655554
No 80
>2blf_B SORB, sulfite\:cytochrome C oxidoreductase subunit B; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_B* 2c9x_B* 2ca3_B* 2ca4_B*
Probab=22.15 E-value=99 Score=17.36 Aligned_cols=30 Identities=3% Similarity=-0.186 Sum_probs=23.0
Q ss_pred chhhhhHHHHHhhc-cC--CCChHHHHHHHHHH
Q psy18112 71 SVDTIFPSSRRDYD-PT--DEPLREEDRIWFRE 100 (107)
Q Consensus 71 ~d~~~f~~l~~al~-~l--Gf~~~e~~~I~~il 100 (107)
.+...|..+...|. .. .++++|+..|..-|
T Consensus 45 ~~~~~W~~~v~~M~~~~g~~ls~~e~~~I~~YL 77 (81)
T 2blf_B 45 KGQAFWDAEVQKMIKVYHAPVDEADAKAIADYL 77 (81)
T ss_dssp CCHHHHHHHHHHHHHTSCCCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 35678888888887 34 48999999888766
No 81
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.79 E-value=20 Score=18.48 Aligned_cols=22 Identities=0% Similarity=-0.158 Sum_probs=14.1
Q ss_pred HHHHhhccCCCChHHHHHHHHH
Q psy18112 78 SSRRDYDPTDEPLREEDRIWFR 99 (107)
Q Consensus 78 ~l~~al~~lGf~~~e~~~I~~i 99 (107)
+..+.|..|||+++....-.+.
T Consensus 11 ~~v~~L~~MGF~~~~a~~AL~~ 32 (47)
T 2ekk_A 11 QQLQQLMDMGFTREHAMEALLN 32 (47)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHH
Confidence 3456666688988766555444
No 82
>4fp9_B Mterf domain-containing protein 2; modification enzyme, transferase; HET: SAM; 2.90A {Homo sapiens}
Probab=21.66 E-value=71 Score=23.49 Aligned_cols=27 Identities=0% Similarity=-0.235 Sum_probs=22.5
Q ss_pred hhhhHHHHHhhccCCCChHHHHHHHHH
Q psy18112 73 DTIFPSSRRDYDPTDEPLREEDRIWFR 99 (107)
Q Consensus 73 ~~~f~~l~~al~~lGf~~~e~~~I~~i 99 (107)
..+|+.+...|.-+||+++++..++..
T Consensus 43 ~~~~e~~l~~L~d~Gfs~~~i~~il~~ 69 (335)
T 4fp9_B 43 SLELERVMSSLLDMGFSNAHINELLSV 69 (335)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHCCCCHHHHHHHHHh
Confidence 457888999999999999998877664
No 83
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=21.29 E-value=72 Score=20.38 Aligned_cols=27 Identities=7% Similarity=0.051 Sum_probs=20.8
Q ss_pred hhHHHHHhhccCCCChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTDEPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lGf~~~e~~~I~~il~ 101 (107)
...++..++..+|++++++..+|..+.
T Consensus 146 s~~El~~~l~~~g~~~~~~~~~~~~~D 172 (208)
T 2hpk_A 146 DVDELKTMMKAFDVPQEAAYTFFEKAD 172 (208)
T ss_dssp CHHHHHHHHHHTTSCTTHHHHHHHHHC
T ss_pred CHHHHHHHHHHhCcCHHHHHHHHHHhC
Confidence 455566777778899999999998874
No 84
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=21.15 E-value=59 Score=16.72 Aligned_cols=21 Identities=10% Similarity=-0.132 Sum_probs=15.9
Q ss_pred HHHHhhccCCCChHHHHHHHH
Q psy18112 78 SSRRDYDPTDEPLREEDRIWF 98 (107)
Q Consensus 78 ~l~~al~~lGf~~~e~~~I~~ 98 (107)
.-.+|++.-||+++|...+-+
T Consensus 7 selqalkkegfspeelaales 27 (48)
T 1g6u_A 7 SELQALKKEGFSPEELAALES 27 (48)
T ss_dssp HHHHHHHHTTCSHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHH
Confidence 345788999999999776543
No 85
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=20.83 E-value=1e+02 Score=18.40 Aligned_cols=27 Identities=4% Similarity=-0.092 Sum_probs=19.4
Q ss_pred hhHHHHHhhccCC--CChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTD--EPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lG--f~~~e~~~I~~il~ 101 (107)
...++..++..+| ++++++..+|..+.
T Consensus 114 ~~~e~~~~l~~~g~~~~~~~~~~~~~~~d 142 (162)
T 1top_A 114 DIEELGEILRATGEHVTEEDIEDLMKDSD 142 (162)
T ss_dssp CHHHHHHHHHTTTCCCCHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 3445556666666 88889999988874
No 86
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.68 E-value=47 Score=18.19 Aligned_cols=22 Identities=0% Similarity=-0.242 Sum_probs=14.2
Q ss_pred HHHHhhccCCCChHHHHHHHHH
Q psy18112 78 SSRRDYDPTDEPLREEDRIWFR 99 (107)
Q Consensus 78 ~l~~al~~lGf~~~e~~~I~~i 99 (107)
+..+.|..|||+.++...-.+.
T Consensus 11 ~~v~~L~~MGF~~~~a~~AL~~ 32 (63)
T 2dak_A 11 DCVTTIVSMGFSRDQALKALRA 32 (63)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHH
Confidence 3456666689988776655444
No 87
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=20.65 E-value=55 Score=17.16 Aligned_cols=26 Identities=4% Similarity=-0.100 Sum_probs=16.6
Q ss_pred hHHHHHhhccCC--CChHHHHHHHHHHh
Q psy18112 76 FPSSRRDYDPTD--EPLREEDRIWFREE 101 (107)
Q Consensus 76 f~~l~~al~~lG--f~~~e~~~I~~il~ 101 (107)
..++..++..+| ++++++..+|..+.
T Consensus 26 ~~el~~~l~~~g~~~~~~~~~~~~~~~d 53 (77)
T 2joj_A 26 YHELKVAMRALGFDVKKPEILELMNEYD 53 (77)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHC
Confidence 444555566556 46677788887764
No 88
>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=20.57 E-value=33 Score=20.32 Aligned_cols=25 Identities=4% Similarity=-0.351 Sum_probs=18.1
Q ss_pred hHHHHHhhccCCCChHHHHHHHHHH
Q psy18112 76 FPSSRRDYDPTDEPLREEDRIWFRE 100 (107)
Q Consensus 76 f~~l~~al~~lGf~~~e~~~I~~il 100 (107)
.++..+.|-.|||+.++.....+..
T Consensus 29 ~ee~I~~Lv~MGF~~~~A~~AL~~t 53 (83)
T 1veg_A 29 SQESINQLVYMGFDTVVAEAALRVF 53 (83)
T ss_dssp CHHHHHHHHHHSCCHHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCHHHHHHHHHHc
Confidence 4556677778899998877766543
No 89
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=20.47 E-value=81 Score=20.07 Aligned_cols=26 Identities=8% Similarity=-0.371 Sum_probs=19.9
Q ss_pred hhHHHHHhhccCCCChHHHHHHHHHH
Q psy18112 75 IFPSSRRDYDPTDEPLREEDRIWFRE 100 (107)
Q Consensus 75 ~f~~l~~al~~lGf~~~e~~~I~~il 100 (107)
...++...++.+|++++++..+|...
T Consensus 17 ~~~el~~~~~~~~~~~~~i~~~f~~~ 42 (207)
T 2d8n_A 17 SKEILEELQLNTKFSEEELCSWYQSF 42 (207)
T ss_dssp CHHHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 34556667777889999999998876
No 90
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=20.45 E-value=1.2e+02 Score=17.06 Aligned_cols=27 Identities=4% Similarity=-0.228 Sum_probs=19.9
Q ss_pred hhHHHHHhhccCC-----CChHHHHHHHHHHh
Q psy18112 75 IFPSSRRDYDPTD-----EPLREEDRIWFREE 101 (107)
Q Consensus 75 ~f~~l~~al~~lG-----f~~~e~~~I~~il~ 101 (107)
...++..++..+| ++++++..+++.+.
T Consensus 59 ~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D 90 (108)
T 1rro_A 59 DGDELKYFLQKFQSDARELTESETKSLMDAAD 90 (108)
T ss_dssp CTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHhhccCCCCHHHHHHHHHHhC
Confidence 4556667777773 78889999988774
Done!