Query psy18113
Match_columns 542
No_of_seqs 204 out of 1540
Neff 8.1
Searched_HMMs 46136
Date Fri Aug 16 22:51:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18113.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18113hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0659 SUL1 Sulfate permease 100.0 1.2E-88 2.6E-93 731.9 50.4 487 8-542 2-507 (554)
2 TIGR00815 sulP high affinity s 100.0 4.3E-88 9.4E-93 739.5 52.8 497 14-542 1-527 (563)
3 PRK11660 putative transporter; 100.0 1.3E-85 2.7E-90 720.1 53.3 494 7-542 4-523 (568)
4 KOG0236|consensus 100.0 1.9E-87 4E-92 737.5 38.4 510 4-542 56-603 (665)
5 PF00916 Sulfate_transp: Sulfa 100.0 2.6E-46 5.6E-51 376.8 16.8 275 117-416 1-280 (280)
6 COG2252 Xanthine/uracil/vitami 100.0 2.4E-27 5.3E-32 243.3 33.5 382 6-447 3-407 (436)
7 TIGR03173 pbuX xanthine permea 100.0 6.4E-27 1.4E-31 247.3 35.3 321 38-414 11-353 (406)
8 PRK10720 uracil transporter; P 100.0 1.7E-25 3.7E-30 236.5 32.9 356 38-454 30-416 (428)
9 TIGR00801 ncs2 uracil-xanthine 99.9 8.5E-25 1.8E-29 231.2 33.1 325 36-412 19-367 (415)
10 PF13792 Sulfate_tra_GLY: Sulf 99.9 1.1E-24 2.3E-29 175.8 8.5 82 13-94 1-83 (84)
11 TIGR03616 RutG pyrimidine util 99.9 1.2E-20 2.6E-25 199.6 34.8 324 26-406 28-372 (429)
12 COG2233 UraA Xanthine/uracil p 99.8 2.1E-18 4.6E-23 179.0 27.7 307 57-410 56-376 (451)
13 PF00860 Xan_ur_permease: Perm 99.8 4E-18 8.8E-23 179.3 28.7 339 28-412 1-365 (389)
14 PRK11412 putative uracil/xanth 99.8 3.7E-17 8.1E-22 172.1 33.5 326 37-415 23-376 (433)
15 TIGR00843 benE benzoate transp 99.6 5.8E-13 1.2E-17 137.3 32.0 363 1-440 1-392 (395)
16 TIGR00834 ae anion exchange pr 99.5 1.3E-10 2.9E-15 130.2 36.8 347 33-398 374-790 (900)
17 KOG1172|consensus 99.4 4.8E-10 1E-14 122.7 34.2 337 43-398 375-766 (876)
18 PF03594 BenE: Benzoate membra 99.4 1.1E-09 2.5E-14 111.1 30.8 342 29-440 6-376 (378)
19 PF01740 STAS: STAS domain; I 98.9 2.2E-09 4.8E-14 93.3 6.7 74 464-542 8-81 (117)
20 COG3135 BenE Uncharacterized p 98.9 8.4E-07 1.8E-11 88.5 24.9 291 29-389 21-335 (402)
21 cd06844 STAS Sulphate Transpor 98.8 6.8E-09 1.5E-13 87.7 7.0 66 464-542 7-72 (100)
22 PF00955 HCO3_cotransp: HCO3- 98.8 1.3E-09 2.7E-14 116.5 2.6 345 35-399 40-472 (510)
23 TIGR02886 spore_II_AA anti-sig 98.7 2.3E-08 4.9E-13 85.4 7.2 66 464-542 7-72 (106)
24 KOG1292|consensus 98.7 1.8E-06 3.8E-11 89.7 21.5 297 59-400 55-392 (510)
25 cd07041 STAS_RsbR_RsbS_like Su 98.7 3E-08 6.5E-13 85.1 7.0 66 464-542 9-74 (109)
26 cd07042 STAS_SulP_like_sulfate 98.5 4.4E-07 9.6E-12 77.0 8.3 68 463-542 7-74 (107)
27 cd07043 STAS_anti-anti-sigma_f 98.3 2.6E-06 5.7E-11 71.1 7.1 64 465-542 8-71 (99)
28 TIGR00377 ant_ant_sig anti-ant 98.2 2.6E-06 5.6E-11 72.7 6.8 66 464-542 11-76 (108)
29 PF11840 DUF3360: Protein of u 97.6 0.032 6.9E-07 56.6 23.6 255 104-412 145-418 (492)
30 PF13466 STAS_2: STAS domain 97.4 0.00029 6.2E-09 56.6 5.2 58 469-541 1-58 (80)
31 COG1366 SpoIIAA Anti-anti-sigm 97.3 0.00069 1.5E-08 58.8 6.5 63 467-542 15-77 (117)
32 TIGR00815 sulP high affinity s 92.3 6.6 0.00014 43.7 17.5 115 279-398 10-142 (563)
33 COG0659 SUL1 Sulfate permease 91.1 5.4 0.00012 44.2 14.9 110 284-398 22-143 (554)
34 TIGR03173 pbuX xanthine permea 90.9 5.5 0.00012 42.3 14.5 112 35-154 225-346 (406)
35 PRK11660 putative transporter; 89.7 12 0.00026 41.7 16.4 113 280-397 26-147 (568)
36 PRK11412 putative uracil/xanth 89.3 6 0.00013 42.4 13.1 119 31-157 242-371 (433)
37 TIGR00801 ncs2 uracil-xanthine 89.0 4 8.6E-05 43.6 11.5 120 30-157 235-365 (415)
38 PRK10720 uracil transporter; P 84.7 10 0.00023 40.6 11.9 113 35-155 231-354 (428)
39 COG3113 Predicted NTP binding 84.0 1.1 2.3E-05 37.2 3.0 31 511-541 41-71 (99)
40 TIGR03616 RutG pyrimidine util 78.1 17 0.00037 39.0 10.6 111 35-153 253-372 (429)
41 PF00860 Xan_ur_permease: Perm 66.0 88 0.0019 33.0 12.5 117 30-154 233-360 (389)
42 PF00916 Sulfate_transp: Sulfa 64.1 20 0.00044 35.6 7.0 117 21-146 140-262 (280)
43 COG2233 UraA Xanthine/uracil p 58.4 15 0.00032 39.4 4.9 92 58-157 284-376 (451)
44 PF06686 SpoIIIAC: Stage III s 53.2 38 0.00083 25.1 5.1 45 85-129 9-54 (58)
45 cd00394 Clp_protease_like Case 45.2 53 0.0011 29.6 5.8 58 468-539 1-58 (161)
46 PF03956 DUF340: Membrane prot 43.7 62 0.0013 30.6 6.1 57 379-435 23-80 (191)
47 PRK12657 putative monovalent c 40.3 47 0.001 27.9 4.1 30 291-320 68-97 (100)
48 PHA00736 hypothetical protein 39.2 1.4E+02 0.0031 22.7 6.0 68 44-112 3-71 (79)
49 PF14213 DUF4325: Domain of un 37.6 96 0.0021 24.1 5.4 28 511-538 19-47 (74)
50 TIGR00843 benE benzoate transp 37.0 4E+02 0.0087 28.2 11.4 70 321-391 64-143 (395)
51 COG1296 AzlC Predicted branche 35.1 75 0.0016 31.1 5.3 82 24-120 9-93 (238)
52 KOG1288|consensus 35.0 2.9E+02 0.0063 31.4 10.1 76 317-392 291-382 (945)
53 TIGR00210 gltS sodium--glutama 33.7 77 0.0017 33.6 5.6 41 106-146 7-51 (398)
54 cd07023 S49_Sppa_N_C Signal pe 31.3 1.8E+02 0.0039 27.5 7.3 61 466-540 2-65 (208)
55 TIGR00706 SppA_dom signal pept 31.2 1.6E+02 0.0035 27.9 7.0 58 466-538 2-59 (207)
56 COG3715 ManY Phosphotransferas 30.7 3E+02 0.0065 27.4 8.6 64 315-379 51-114 (265)
57 PF05437 AzlD: Branched-chain 29.7 2E+02 0.0044 23.6 6.5 62 376-441 34-96 (99)
58 cd07019 S49_SppA_1 Signal pept 29.6 2E+02 0.0043 27.4 7.3 62 466-541 2-70 (211)
59 PRK12600 putative monovalent c 29.2 91 0.002 25.8 4.1 28 291-318 64-91 (94)
60 PF03609 EII-Sor: PTS system s 29.1 4.2E+02 0.0091 25.9 9.5 28 117-144 162-189 (238)
61 PRK09757 PTS system N-acetylga 28.8 3.2E+02 0.007 27.3 8.7 28 118-145 163-190 (267)
62 PF11964 SpoIIAA-like: SpoIIAA 28.1 99 0.0022 25.5 4.4 55 465-532 1-56 (109)
63 PF07178 TraL: TraL protein; 26.7 1.6E+02 0.0035 24.2 5.3 44 409-452 18-62 (95)
64 COG0786 GltS Na+/glutamate sym 25.6 1.4E+02 0.003 31.4 5.6 54 104-157 7-64 (404)
65 PF02308 MgtC: MgtC family; I 25.1 4.7E+02 0.01 22.9 8.9 47 343-389 13-66 (134)
66 PF05552 TM_helix: Conserved T 24.9 1E+02 0.0022 22.3 3.3 27 374-400 8-34 (53)
67 PF13792 Sulfate_tra_GLY: Sulf 24.8 3.6E+02 0.0079 21.7 6.8 58 278-340 10-68 (84)
68 PF10131 PTPS_related: 6-pyruv 24.7 6.2E+02 0.013 28.6 11.0 89 357-450 51-141 (616)
69 PF03616 Glt_symporter: Sodium 23.8 1.3E+02 0.0029 31.5 5.2 37 107-143 8-48 (368)
70 PRK10692 hypothetical protein; 23.0 2.9E+02 0.0064 22.4 5.7 31 24-56 5-35 (92)
71 PRK15065 PTS system mannose-sp 22.9 5.3E+02 0.011 25.7 8.9 27 118-144 163-189 (262)
72 COG4392 Predicted membrane pro 22.3 4.8E+02 0.01 22.1 7.1 62 376-441 39-101 (107)
73 COG1279 Lysine efflux permease 20.8 3.2E+02 0.007 26.0 6.5 74 76-151 14-87 (202)
74 PF03904 DUF334: Domain of unk 20.5 5.5E+02 0.012 24.9 8.0 80 355-446 144-225 (230)
75 KOG0236|consensus 20.5 1.3E+03 0.028 26.3 14.9 119 17-144 313-440 (665)
76 PF10762 DUF2583: Protein of u 20.0 3.4E+02 0.0074 21.9 5.4 29 25-55 6-34 (89)
No 1
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-88 Score=731.93 Aligned_cols=487 Identities=30% Similarity=0.505 Sum_probs=446.0
Q ss_pred hhhhcccccccCCCCChhhhhHhHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHhHHHHHHHhhhcCCCccccchhHHH
Q psy18113 8 LLHRKVPILAWLPKYNVNAAVSDVLAGITVGLTLIPQAIAYASLAGLNPKYGLYSSIFGGVMYIFLGTTKQLSVGPTSIM 87 (542)
Q Consensus 8 ~~~~~~p~~~wl~~y~~~~l~~Di~aGi~~~~~~iP~~~aya~lag~pp~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~ 87 (542)
++++++|..+|.+.|+++++++|++||+|+|++++||+||||..||+||++|||++++++++|++||+||++++||++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~Dl~AGltva~valP~ama~a~~aGv~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a~ 81 (554)
T COG0659 2 RLRSEIPTLKWLPYYFRSWLRGDLLAGLTVAAVALPLAMAFAIAAGVPPEAGLYASIVAGIIYALFGGSRGLISGPTGAF 81 (554)
T ss_pred cchhhccHHHhccccchhhhHHHHHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHcCCccceeccchhh
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh---cCCHHHHHHHHHHHHHHHHHHHhhhhchhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccCCCcHH
Q psy18113 88 ALLCLTYTH---DTSLEMVAFLTFLTGLVQLTCGLLSLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFKPKNFL 164 (542)
Q Consensus 88 ~~~~~~~~~---~~~~~~~~~~~~l~Gii~~llg~~rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~ 164 (542)
+++++..+. +++++++..+++++|++|+++|++|+|++++|+|+||+.||++|+|++|+.+|++.++|++....+++
T Consensus 82 ~~v~a~~i~~~~~~g~~~~~~~tllaGv~~i~~G~lRLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~~~~~~~ 161 (554)
T COG0659 82 AVVLAAVIASLVETGLALAFLATLLAGVFQILLGLLRLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLASKVSGFW 161 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchH
Confidence 999999988 89999999999999999999999999999999999999999999999999999999999998877789
Q ss_pred HHHHHHHhccCCCchhhHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHHHHHhc
Q psy18113 165 DMYVQLFKNIGKTKYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIITYVLKN 244 (542)
Q Consensus 165 ~~~~~~~~~l~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~ 244 (542)
+++..++++..+.|+.+++++++++++++.++|+.++.|. .++++++++.+++.++.
T Consensus 162 ~~~~~l~~~~~~~~~~~~~lg~~~l~il~~~~~~~~~~P~-----------------------~liaiv~~t~i~~~~~~ 218 (554)
T COG0659 162 AKVSALFTVLLTINLATLLLGLLTLAILLFLPRLTPRIPS-----------------------PLIALVLGTLIVWIFPL 218 (554)
T ss_pred HHHHHHHHhcccccHHHHHHHHHHHHHHHHccchhhhCCc-----------------------HHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999998855431 35678899999999887
Q ss_pred CCCccCeeEecccCCCCCCCCCCCCccccCCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc--CCCccCCChhHH
Q psy18113 245 THEKVPFALVGNIESGFPSLAFPPTHININGTDLGLLDMVSHLNTGIFLVPLVGLVANVAIAKAFS--EGKIVDASQEMI 322 (542)
Q Consensus 245 ~~~~~~~~~~g~ip~~~p~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a--~~~~~d~n~EL~ 322 (542)
+...++ .+.+.+|+++|++.+|+++ |+.+.+ +.+.++++++++++|++.++++++ +|+++|.||||+
T Consensus 219 ~~~~~G-~i~~~lp~~~~~~~~P~~~---------~~~~~~-l~~~al~la~lg~iesllta~~~~~~~~~~~d~nrELi 287 (554)
T COG0659 219 DSLRYG-EIPGSLPSGLPHFRLPNVS---------LSLLLA-LLPYALALALLGLLESLLTAVSFDGMTGTKHDSNRELI 287 (554)
T ss_pred Cchhcc-cCcccCCcCCCcccCCCCC---------HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHH
Confidence 642244 6788999999999999984 555544 455568999999999999999999 678999999999
Q ss_pred HHhhhhhHhhhhCCCCCccchhhhHHhhhcCcCchhHHHHHHHHHHHHHHHhhHHHhhhhHHHHHHHHHHHHhhhccHHH
Q psy18113 323 ALGMGNLAGSFINAMPVASSFSRSAVNNASGVQTTLGGLYTSIIVLLSLSLLTPYLQYIPQASLAAVLVCAVLTLVEIEI 402 (542)
Q Consensus 323 a~G~aNivs~~fG~~p~~~s~srS~~~~~~GarT~la~i~~a~~~ll~ll~~~~ll~~iP~~vLa~ili~~~~~li~~~~ 402 (542)
+||+||+++|||||+|+||+++||++|.++|||||+|++++++++++++++++|+++|||+|+|++++++++++|+||+.
T Consensus 288 aqGiaNi~sglfgg~p~~g~~srS~~nv~sGarT~lsgi~~a~~lll~l~~~~~~~~~IP~a~Laavli~v~~~l~~~~~ 367 (554)
T COG0659 288 AQGIANIASGLFGGIPATGSISRSAINIKSGARTRLSGIIHAALLLLLLLFLAPLVSYIPLAALAAVLILVGWGLLDWSL 367 (554)
T ss_pred HhhHHHHHHHHhCCccccchhHHHHHHHHhCCcChHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHh-hccCccchHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCceeecccc-------------ccCCceEEE
Q psy18113 403 MAVL-WKTNKRNFLTLVVTFAACLLIGIEIGLLCGICLDIFNLLHFNARPNVHFDKKV-------------TDMGFEFWL 468 (542)
Q Consensus 403 ~~~l-~~~~~~d~~v~~~t~~~~l~~~~~~Gi~~Gi~~s~~~~~~~~~r~~~~~~~~~-------------~~~~~~i~i 468 (542)
++.+ +|.+|.|+.++++|++++++.|++.|+.+|+++|++.+++|.+||+....+.. ++..+++.+
T Consensus 368 ~~~~~~~~~~~e~~v~~~t~~~tv~~~l~~GV~vGi~ls~~~~i~r~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 447 (554)
T COG0659 368 LKPLLRKLPRGELLVLLTTALLTVFFDLVIGVVVGILLACLLFIRRISRPSIVVLGRVPGPAGSDNALKPLDEIGPGVLV 447 (554)
T ss_pred HHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhhccCCCcccccccccccccCCCCeEE
Confidence 8984 45889999999999999999999999999999999999999999986543321 112357999
Q ss_pred EEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhhcCC
Q psy18113 469 FEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNNFYV 542 (542)
Q Consensus 469 ~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~~~ 542 (542)
+|++|++||+|++++++++.++. .+ + ++ .+++|+++++++|.|+.++++++.++++++|+
T Consensus 448 ~ri~gplfF~~~~~~~~~i~~~~----------~~-~--~~-~~il~~~~v~~iD~ta~~al~~~~~~~~~~g~ 507 (554)
T COG0659 448 YRLSGPLFFGNADRLERALLGLI----------EE-R--PE-RVILDLKSVPYIDASAAEALEDLIKELERRGI 507 (554)
T ss_pred EEecCceEEeeHHHHHHHHHHHH----------hc-c--CC-EEEEEcccCCcCChhHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999832 11 2 35 59999999999999999999999999999985
No 2
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=100.00 E-value=4.3e-88 Score=739.46 Aligned_cols=497 Identities=32% Similarity=0.563 Sum_probs=436.7
Q ss_pred cccccCCCCChhhhhHhHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHhHHHHHHHhhhcCCCccccchhHHHHHHHHH
Q psy18113 14 PILAWLPKYNVNAAVSDVLAGITVGLTLIPQAIAYASLAGLNPKYGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLCLT 93 (542)
Q Consensus 14 p~~~wl~~y~~~~l~~Di~aGi~~~~~~iP~~~aya~lag~pp~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~ 93 (542)
|+++|+++|+++++++|++||++++++++||+||||.++|+||.+|||++++++++|++||+||++++||++.+++++++
T Consensus 1 p~~~wl~~y~~~~l~~Di~aGltv~~~~iP~~~ayA~laglpp~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~ 80 (563)
T TIGR00815 1 PVLRWLPHYRLKKFKGDLMAGLTVGILLIPQAMAYAILAGLSPIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGS 80 (563)
T ss_pred ChhhhhhhCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhcCC---------HHHHHHHHHHHHHHHHHHHhhhhchhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCccc--CCCc
Q psy18113 94 YTHDTS---------LEMVAFLTFLTGLVQLTCGLLSLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQF--KPKN 162 (542)
Q Consensus 94 ~~~~~~---------~~~~~~~~~l~Gii~~llg~~rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~--~~~~ 162 (542)
++++.+ .+.+..+++++|++|+++|++|+|++++|+|+||+.||++|+|++|+.+|+++++|.+. +.++
T Consensus 81 ~v~~~~~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~lrlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~~~~~ 160 (563)
T TIGR00815 81 VIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRLGFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTD 160 (563)
T ss_pred HHHHhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 875422 23567889999999999999999999999999999999999999999999999999987 4566
Q ss_pred HHHHHHHHHhccCCC---chhhHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHH
Q psy18113 163 FLDMYVQLFKNIGKT---KYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIIT 239 (542)
Q Consensus 163 ~~~~~~~~~~~l~~~---~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~ 239 (542)
+++++.+.+.++++. |+++++++++++++++..|+++++.+. +. | .+.|..++++++++.++
T Consensus 161 ~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~-------------~~-~-~~~p~~li~vi~~~~~~ 225 (563)
T TIGR00815 161 TLGVVISTWAGLPNTHNWNWCTLVIGLVLLLFLLYTKKLGKRNKK-------------LL-F-APAVAPLLVVILATLAV 225 (563)
T ss_pred hHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHhhhhccc-------------hh-c-ccccHHHHHHHHHHHHH
Confidence 888888888888777 999999999999999888887654321 11 1 11222566777788887
Q ss_pred HHHhcCCCccCeeEecccCCCCCCCCCCCCccccCCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc--CCCccCC
Q psy18113 240 YVLKNTHEKVPFALVGNIESGFPSLAFPPTHININGTDLGLLDMVSHLNTGIFLVPLVGLVANVAIAKAFS--EGKIVDA 317 (542)
Q Consensus 240 ~~~~~~~~~~~~~~~g~ip~~~p~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a--~~~~~d~ 317 (542)
+.++.++ +++..+|++|.++|.+.+|++ +|..+ .++.+.++++++++++|+++++|+++ +|+++|.
T Consensus 226 ~~~~~~~--~~~~~~g~ip~g~p~~~~~~~---------~~~~~-~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~~~~d~ 293 (563)
T TIGR00815 226 TIGLHKK--QGVSILGHIPSGLSFFPPITL---------DWELL-PTLAPDAIAIAIVGLIESIAIARSFARMTGYKIDA 293 (563)
T ss_pred HHHccCC--CCeEEEeecCCCCCCCCCCCC---------CHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 7775432 788999999999988888877 46554 44556678999999999999999999 6789999
Q ss_pred ChhHHHHhhhhhHhhhhCCCCCccchhhhHHhhhcCcCchhHHHHHHHHHHHHHHHhhHHHhhhhHHHHHHHHHHHHhhh
Q psy18113 318 SQEMIALGMGNLAGSFINAMPVASSFSRSAVNNASGVQTTLGGLYTSIIVLLSLSLLTPYLQYIPQASLAAVLVCAVLTL 397 (542)
Q Consensus 318 n~EL~a~G~aNivs~~fG~~p~~~s~srS~~~~~~GarT~la~i~~a~~~ll~ll~~~~ll~~iP~~vLa~ili~~~~~l 397 (542)
||||+++|++|+++|+|||+|++++++||++|+++|+|||++++++++++++++++++|+++|+|++++|+++++++++|
T Consensus 294 n~El~a~G~~N~~~~~fg~~p~~~s~srs~~~~~~G~~t~~a~i~~~~~~l~~~l~~~~~l~~iP~~~la~ili~~~~~l 373 (563)
T TIGR00815 294 NQELVAQGIANIVGSFFSCYPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYIPQAALAAIIISAVRGL 373 (563)
T ss_pred cHHHHHhhHHHHHHHHhCccCCCCcchHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHhhccCccchHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCceeecccc--------------ccCC
Q psy18113 398 VEIEIMAVLWKTNKRNFLTLVVTFAACLLIGIEIGLLCGICLDIFNLLHFNARPNVHFDKKV--------------TDMG 463 (542)
Q Consensus 398 i~~~~~~~l~~~~~~d~~v~~~t~~~~l~~~~~~Gi~~Gi~~s~~~~~~~~~r~~~~~~~~~--------------~~~~ 463 (542)
+||++++++||.++.|+.+|++|+++|+++|++.|+.+|+++|++.+++|++||+....++. .++.
T Consensus 374 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~Gi~vGv~~s~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~ 453 (563)
T TIGR00815 374 IDYKELYKLWKADKMDFVVWLVTFFGVVFTSIEIGLLVGVALSAAFLLLRIARPRGAVLGRVPGTEVYRSIKQYPNARPP 453 (563)
T ss_pred cCHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCceeEeeecCCCCcccchhhCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999997654321 0112
Q ss_pred ceEEEEEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhhcCC
Q psy18113 464 FEFWLFEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNNFYV 542 (542)
Q Consensus 464 ~~i~i~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~~~ 542 (542)
+++.++|++|+|||+|++++++++++++.++.+++ ++++ +.+++|+||++++++|+|++++|+++.++++++|+
T Consensus 454 ~~i~I~r~~g~L~F~na~~~~~~l~~~~~~~~~~~----~~~~-~~~~vIlD~~~V~~iDsSg~~~L~~l~~~l~~~g~ 527 (563)
T TIGR00815 454 PGILVYRVDGPLYFANAEDLKDRLLKRIEDETRRE----LERP-PLQVVILDMSAVPHLDTSGIHALEELRKELKARGI 527 (563)
T ss_pred CCEEEEEcCCceEeCcHHHHHHHHHHHHhhhcccc----ccCC-CceEEEEECCCCCcchHHHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999999988554322110 1111 24689999999999999999999999999999985
No 3
>PRK11660 putative transporter; Provisional
Probab=100.00 E-value=1.3e-85 Score=720.09 Aligned_cols=494 Identities=23% Similarity=0.400 Sum_probs=431.9
Q ss_pred hhhhhcccccc-----cCCCCChhhhhHhHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHhHHHHHHHhhhcCCCcccc
Q psy18113 7 ELLHRKVPILA-----WLPKYNVNAAVSDVLAGITVGLTLIPQAIAYASLAGLNPKYGLYSSIFGGVMYIFLGTTKQLSV 81 (542)
Q Consensus 7 ~~~~~~~p~~~-----wl~~y~~~~l~~Di~aGi~~~~~~iP~~~aya~lag~pp~~gl~~~~~~~ii~~lfgss~~~~~ 81 (542)
+.+.++.|++. |+++|+++++++|++||+|++++.+||+||||.+||+||+||||++++++++|++||+||++++
T Consensus 4 ~~~~~~~~~~~~~~~~wl~~y~~~~l~~D~iAGltv~~~~iPq~mayA~lag~pp~~GLysa~~~~~vyal~Gss~~~~~ 83 (568)
T PRK11660 4 AHLFSVRPFSALIDACWKEKYTAARFTRDLIAGITVGIIAIPLAMALAIASGVPPQYGLYTAAVAGIVIALTGGSRFSVS 83 (568)
T ss_pred chhHhhHhhhhHHHHHHHhcCCHHhhhHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 55666777776 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHhhhhchhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccC--
Q psy18113 82 GPTSIMALLCLTYTHDTSLEMVAFLTFLTGLVQLTCGLLSLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFK-- 159 (542)
Q Consensus 82 Gp~~~~~~~~~~~~~~~~~~~~~~~~~l~Gii~~llg~~rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~-- 159 (542)
||++.++++.++..++++.+.+..+++++|++|+++|++|+|++++|+|+||+.||++|+|++++.+|+++++|++.+
T Consensus 84 Gp~a~~~~~~~~~~~~~~~~~~~~~~~l~Gii~~l~gllrlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~~~~~~ 163 (568)
T PRK11660 84 GPTAAFVVILYPVSQQFGLAGLLVATLMSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQMAHV 163 (568)
T ss_pred ChhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999888887788888888999999999999999999999999999999999999999999999999999864
Q ss_pred CCcHHHHHHHHHhccCCCchhhHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHH
Q psy18113 160 PKNFLDMYVQLFKNIGKTKYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIIT 239 (542)
Q Consensus 160 ~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~ 239 (542)
++++++++.+++++++++||++.++++.++++++.++|++++.| . .+++++++++++
T Consensus 164 ~~~~~~~l~~~~~~l~~~~~~~~~~~~~~l~lll~~~~~~~~iP--~---------------------~li~iiv~t~~~ 220 (568)
T PRK11660 164 PEHYLEKVGALFQALPTINWGDALIGIVTLGVLILWPRLKIRLP--G---------------------HLPALLAGTAVM 220 (568)
T ss_pred CccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhhcccCc--h---------------------HHHHHHHHHHHH
Confidence 45688999999999999999999999999999999887765432 1 355778888898
Q ss_pred HHHhcCCCccCeeEecc--------------cCCCCCCCCCCCCcccc--CCCcCcHHHHHHhhhhHHHHHHHHHHHHHH
Q psy18113 240 YVLKNTHEKVPFALVGN--------------IESGFPSLAFPPTHINI--NGTDLGLLDMVSHLNTGIFLVPLVGLVANV 303 (542)
Q Consensus 240 ~~~~~~~~~~~~~~~g~--------------ip~~~p~~~~P~~~~~~--~~~~~~~~~~~~~l~~~~~~ia~v~~~es~ 303 (542)
+.++..+ .+++.+|. +|+++|++.+|...... +...++|+.+. ++.+.++.+++++++|++
T Consensus 221 ~~~~~~~--~~v~~vg~~~~~~~~~g~~~~~ip~~~p~~~~p~~~~~~~~~~~~~~~~~~~-~ll~~a~~iaiv~~iesl 297 (568)
T PRK11660 221 GVLNLLG--GHVATIGSRFHYVLADGSQGNGIPPLLPQFVLPWNLPGADGQPFTLSWDLIR-ALLPAAFSMAMLGAIESL 297 (568)
T ss_pred HHHhccC--CCceeecccccccccccccccCCCCCCCCCCCCccccccccccCCcCHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 8887542 44555554 67777777777421100 11234776654 455566899999999999
Q ss_pred HHHHHhc--CCCccCCChhHHHHhhhhhHhhhhCCCCCccchhhhHHhhhcCcCchhHHHHHHHHHHHHHHHhhHHHhhh
Q psy18113 304 AIAKAFS--EGKIVDASQEMIALGMGNLAGSFINAMPVASSFSRSAVNNASGVQTTLGGLYTSIIVLLSLSLLTPYLQYI 381 (542)
Q Consensus 304 ~~~~~~a--~~~~~d~n~EL~a~G~aNivs~~fG~~p~~~s~srS~~~~~~GarT~la~i~~a~~~ll~ll~~~~ll~~i 381 (542)
.+++.++ +++++|.||||+++|++|++||+|||+|++++++||++|.++|||||++++++++++++.+++++|+++|+
T Consensus 298 ~~~~~~~~~~~~~~d~n~EL~a~G~aNi~~~~fgg~p~~~s~srSa~n~~aGarT~la~iv~a~~~ll~ll~l~~ll~~i 377 (568)
T PRK11660 298 LCAVVLDGMTGTKHSANSELVGQGLGNIVAPFFGGITATAAIARSAANVRAGATSPISAVIHALLVLLALLVLAPLLSYL 377 (568)
T ss_pred HHHHHHHHhcCCCCCCcHHHHHHhHHHHHHHHhCcccccchHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999998 67899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhccHHHHHHhhc-cCccchHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCceeeccccc
Q psy18113 382 PQASLAAVLVCAVLTLVEIEIMAVLWK-TNKRNFLTLVVTFAACLLIGIEIGLLCGICLDIFNLLHFNARPNVHFDKKVT 460 (542)
Q Consensus 382 P~~vLa~ili~~~~~li~~~~~~~l~~-~~~~d~~v~~~t~~~~l~~~~~~Gi~~Gi~~s~~~~~~~~~r~~~~~~~~~~ 460 (542)
|++++|+++++++++|+|+++++++|| .++.|+.+|+.|+++++++|++.|+.+|+++|++.+++|++|++......+.
T Consensus 378 P~~vLa~ili~~~~~m~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~Gi~~s~~~~~~~~~~~~~~~~~~~~ 457 (568)
T PRK11660 378 PLSAMAALLLMVAWNMSEAHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIAEMTRLAPISVQ 457 (568)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 999999999999999999887777766 5799999999999999999999999999999999999999987532111112
Q ss_pred cCCceEEEEEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhhc
Q psy18113 461 DMGFEFWLFEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNNF 540 (542)
Q Consensus 461 ~~~~~i~i~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~ 540 (542)
++.+++.++|++|+|||+|++++++++++ .. + +.++||+||++++++|+|++++|.++.+++++
T Consensus 458 ~~~~~i~iv~~~g~L~F~n~~~l~~~l~~----------~~--~---~~~~VVlD~~~V~~iDssg~~~L~~l~~~l~~- 521 (568)
T PRK11660 458 DVPDDVLVLRINGPLFFAAAERLFTELES----------RT--E---GKRIVVLQWDAVPVLDAGGLDAFQRFVKRLPE- 521 (568)
T ss_pred cCCCcEEEEEeCCeeeeeeHHHHHHHHHh----------hC--C---CCCEEEEEcCCCCcccHHHHHHHHHHHHHHHC-
Confidence 34568999999999999999999999987 21 1 24479999999999999999999999999999
Q ss_pred CC
Q psy18113 541 YV 542 (542)
Q Consensus 541 ~~ 542 (542)
|+
T Consensus 522 g~ 523 (568)
T PRK11660 522 GC 523 (568)
T ss_pred CC
Confidence 75
No 4
>KOG0236|consensus
Probab=100.00 E-value=1.9e-87 Score=737.53 Aligned_cols=510 Identities=34% Similarity=0.588 Sum_probs=443.2
Q ss_pred chhhhhhhcccccccCCCCCh-hhhhHhHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHhHHHHHHHhhhcCCCccccc
Q psy18113 4 KLTELLHRKVPILAWLPKYNV-NAAVSDVLAGITVGLTLIPQAIAYASLAGLNPKYGLYSSIFGGVMYIFLGTTKQLSVG 82 (542)
Q Consensus 4 ~~~~~~~~~~p~~~wl~~y~~-~~l~~Di~aGi~~~~~~iP~~~aya~lag~pp~~gl~~~~~~~ii~~lfgss~~~~~G 82 (542)
|.++++++++|+++|+|+|++ +++..|++||+|+|++++||+||||.+||+||+||||++++|+++|++||+|||+++|
T Consensus 56 ~~~~~l~~~~Pil~Wlp~Y~~~~~l~~DliaGltvg~l~VPQ~iaYa~la~lppiyGLYssf~~~~iY~~fGtsr~isiG 135 (665)
T KOG0236|consen 56 KFLRSLLSLLPILEWLPKYSLKEWLLGDLIAGLTVGSLSVPQGLAYALLAGLPPIYGLYSSFFPPLIYAIFGTSRHVSIG 135 (665)
T ss_pred HHHHHHHhhccHhhhhhcCCchhhchHHHhcCceeeeeecchHHHHHHHcCCChHHHHHHHHHHHHHheeccCCCccccc
Confidence 457889999999999999996 9999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhh------------cCCHHHHHHHHHHHHHHHHHHHhhhhchhhhhcchhHHHHHHHHHHHHHHHHhh
Q psy18113 83 PTSIMALLCLTYTH------------DTSLEMVAFLTFLTGLVQLTCGLLSLGFVVEFVSLPVVSGFTSSTAIIMASSQL 150 (542)
Q Consensus 83 p~~~~~~~~~~~~~------------~~~~~~~~~~~~l~Gii~~llg~~rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql 150 (542)
|++++|+|++++++ ...++.+..+++++|++|++||++|+|++++|+|+|++.||++|+|++++.+|+
T Consensus 136 ~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va~~lt~l~Giiq~~mG~lrLGfl~~~lS~~~l~GFt~gaa~~I~~sQl 215 (665)
T KOG0236|consen 136 PFAVVSLMVGTVVSQVVLSEAPSNDIATTIQVATTLTFLTGIIQLILGLLRLGFLVRFLSEPALSGFTTGAALHIVTSQL 215 (665)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhcChHHHHccHHHHhHhhhhhhhhhhHHhh
Confidence 99999999996543 245678999999999999999999999999999999999999999999999999
Q ss_pred hhhhCccc-C-CCc---HHHHHHHHHhccCCCchhhHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhc
Q psy18113 151 KYFLGIQF-K-PKN---FLDMYVQLFKNIGKTKYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFIST 225 (542)
Q Consensus 151 ~~~~G~~~-~-~~~---~~~~~~~~~~~l~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (542)
+.++|++. . +.+ .+....+.+.+.++. +.+++++++++++++..|++.+++. ++++| +++
T Consensus 216 k~llGi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~L~~~k~~~~~~~-------------~k~~~-v~~ 280 (665)
T KOG0236|consen 216 KVLLGITSFPRHSGPGSIVFIVFDLLANLPKT-LATLVLSLIFLVVLLLTKELNPKFK-------------KKLFS-VPI 280 (665)
T ss_pred HhhccccccCCCCCceeEEEeeHHhhhccccc-chhhhhHHHHHHHHHHHHHhhhhhc-------------cccee-ecc
Confidence 99999992 2 222 223344555555555 7889999999999999997553321 35566 788
Q ss_pred ccchhHHHHHHHHHHHHhcCCCccCeeEecccCCCCCCCCCCCCccccCCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHH
Q psy18113 226 GRNAFILMGCAIITYVLKNTHEKVPFALVGNIESGFPSLAFPPTHININGTDLGLLDMVSHLNTGIFLVPLVGLVANVAI 305 (542)
Q Consensus 226 ~~~~i~vi~~~~i~~~~~~~~~~~~~~~~g~ip~~~p~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~ 305 (542)
|++++++++++++++.+..+.+ +....++++|.|+|+|.+|+++. +. +..+.++++++++++|++++
T Consensus 281 ~~~li~vIi~T~~~~~~~~~~~-~~~~~~~~i~~g~~~~~lp~~~~--------~~----~~~~~~~~i~iva~~~~iai 347 (665)
T KOG0236|consen 281 PFELIVVIIGTLISYIFRLEGR-YGPIIVGEIPRGFPPPSLPPLSL--------TP----QVIPDAFAIAIVALLEHIAI 347 (665)
T ss_pred cHHHHHHHHHHHHHHHhccccc-cCCeeeccCCCCCCCCCCCChhh--------hH----HHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999987654 55667779999999999999864 33 33445688999999999999
Q ss_pred HHHhc--CCCccCCChhHHHHhhhhhHhhhhCCCCCccchhhhHHhhhcCcCchhHHHHHHHHHHHHHHHhhHHHhhhhH
Q psy18113 306 AKAFS--EGKIVDASQEMIALGMGNLAGSFINAMPVASSFSRSAVNNASGVQTTLGGLYTSIIVLLSLSLLTPYLQYIPQ 383 (542)
Q Consensus 306 ~~~~a--~~~~~d~n~EL~a~G~aNivs~~fG~~p~~~s~srS~~~~~~GarT~la~i~~a~~~ll~ll~~~~ll~~iP~ 383 (542)
+|+++ +++++|.||||+|+|++|++||||+++|+|+++|||++|.++|+|||++++++++++++.+++++|+++|+|+
T Consensus 348 ~k~fa~~~~y~vd~nqELiAlG~~Ni~sSff~~~p~tgs~sRSav~~~sG~~T~~s~i~~~~~vl~~l~~l~p~f~~iP~ 427 (665)
T KOG0236|consen 348 GKSFASLHGYKVDSNQELIALGISNILSSFFGCYPTTGSFSRSAVNIKSGGRTQVAGIVSAALVLLALLFLGPLFYYIPK 427 (665)
T ss_pred HHHHHHHhCCeeCCChHHHHHHHHHHhhhhhceEcccchhhHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHHhhhhhH
Confidence 99999 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh-hccHHHHHHhhccCccchHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCceeeccccc--
Q psy18113 384 ASLAAVLVCAVLT-LVEIEIMAVLWKTNKRNFLTLVVTFAACLLIGIEIGLLCGICLDIFNLLHFNARPNVHFDKKVT-- 460 (542)
Q Consensus 384 ~vLa~ili~~~~~-li~~~~~~~l~~~~~~d~~v~~~t~~~~l~~~~~~Gi~~Gi~~s~~~~~~~~~r~~~~~~~~~~-- 460 (542)
|+||++++.++.+ +.+.++++.+||.+|.|+.+|+.|++.+++.+++.|+++|+++|++.++.|.+||+...++...
T Consensus 428 ~vLaaIIi~a~~~~l~~~~~~~~lwr~~k~D~~~~~~t~~~~i~~~ve~Glligv~~s~~~ii~~~~~p~~~~l~~~~~t 507 (665)
T KOG0236|consen 428 CVLAAIIISALIGMLIQLEDLKPLWRLSKIDLLIWVVTFFTTIFLSLEIGLLIGVAFSLFFIILRSQRPRISLLGRIPRT 507 (665)
T ss_pred HHHHHHHHHHhhHHHhhhhhhhhheeCCHHHHHHHHHHhheeeEehhhhhHHHHHHHHHHHHHHHhcCcchhhhcccCCC
Confidence 9999999999999 5699999999999999999999999999999999999999999999999999999987654211
Q ss_pred ------------cCCceEEEEEeCCccccccHHHHHHHHH--hhhhhcc-chhhhhhhcCCCCCeEEEEEccCCCcccHH
Q psy18113 461 ------------DMGFEFWLFEPSGGLLFPTVDYLREVVL--SKIYEDN-NKNKMLHRTRAAGDVYIIINCSHIDKTDYT 525 (542)
Q Consensus 461 ------------~~~~~i~i~r~~g~LfF~na~~l~~~l~--~~~~~~~-~~~~~~~~~~~~~~~~vIlD~~~v~~iD~t 525 (542)
++-+++.++|++++++|+|.+.++++++ +.+.+.+ .++....-+.+ ..+++|+||++++++|.+
T Consensus 508 ~~~~~~~~y~~~~~~~gi~i~r~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vild~s~v~~iD~~ 586 (665)
T KOG0236|consen 508 NIYRDINQYRELKEIPGIKIFRISSPLLFGNVESFEKKLERLKYLRKEEVLENSARELHEN-SIHSVILDCSGVSFIDTS 586 (665)
T ss_pred ccccchhhcchhhccCceEEEEeccceeeccHHHHHHHHHHHHhhhhcccccCcccccccC-cceEEEEECCccchhhHH
Confidence 1125699999999999999999999883 3333321 11111000111 256899999999999999
Q ss_pred HHHHHHHHHHHHhhcCC
Q psy18113 526 AAKVKTFLFRDCNNFYV 542 (542)
Q Consensus 526 a~~~l~~l~~~~~~~~~ 542 (542)
++++|+++.++++++++
T Consensus 587 g~~~L~~l~~~~~~~~i 603 (665)
T KOG0236|consen 587 GASALKSLFKDLKTRGV 603 (665)
T ss_pred HHHHHHHHHHHHHhcCc
Confidence 99999999999999885
No 5
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=2.6e-46 Score=376.78 Aligned_cols=275 Identities=33% Similarity=0.600 Sum_probs=232.2
Q ss_pred HHhhhhchhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCccc--CCCcHHHHHHHHHhccCC-CchhhHHHHHHHHHHHH
Q psy18113 117 CGLLSLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQF--KPKNFLDMYVQLFKNIGK-TKYSDLSLGVACVVLLL 193 (542)
Q Consensus 117 lg~~rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~--~~~~~~~~~~~~~~~l~~-~~~~~~~l~~~~l~~l~ 193 (542)
||++|+|++++|+|+||+.||++|+|++++.+|++.++|.+. .+++..+.+.++++..++ +|+.++++++++++++.
T Consensus 1 lGllrlG~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 80 (280)
T PF00916_consen 1 LGLLRLGFLVRFIPRPVISGFLAGIAILIIFSQLPNLLGIPVVPSHEGLFSFIRALFQLISTITNWPTLAIGLVALVFLL 80 (280)
T ss_pred CccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhhhhhhccchhhhhhhhHHHHHHh
Confidence 589999999999999999999999999999999999999984 334445555666666655 58999999999998888
Q ss_pred HHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHHHHHhcCCCccCeeEecccCCCCCCCCCCCCcccc
Q psy18113 194 FMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIITYVLKNTHEKVPFALVGNIESGFPSLAFPPTHINI 273 (542)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~~~~~~~~~~~g~ip~~~p~~~~P~~~~~~ 273 (542)
..++..++.+. |+. ...|..++++++++++++.+..+. ++++.++++|.++|++.+|+.+
T Consensus 81 ~~~~~~~~~~~---------~~~------~~~p~~li~vv~~~~~~~~~~~~~--~~v~~~~~i~~~lp~~~~p~~~--- 140 (280)
T PF00916_consen 81 IIRLLPKRLPS---------RFW------PPIPAPLIVVVLGTLLSWLFLLDK--YGVAIVGEIPSGLPPPSLPSFD--- 140 (280)
T ss_pred hhhhhhhhccc---------ccc------ccccccceeeehhhhhhhhhhhcc--ccccccccccccCccccCcccc---
Confidence 88877632210 111 112335667788888888775432 5788899999999999999421
Q ss_pred CCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc--CCCccCCChhHHHHhhhhhHhhhhCCCCCccchhhhHHhhh
Q psy18113 274 NGTDLGLLDMVSHLNTGIFLVPLVGLVANVAIAKAFS--EGKIVDASQEMIALGMGNLAGSFINAMPVASSFSRSAVNNA 351 (542)
Q Consensus 274 ~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a--~~~~~d~n~EL~a~G~aNivs~~fG~~p~~~s~srS~~~~~ 351 (542)
++|+.+.+ +.+.++++++++++|++.++|+++ +++++|.||||+++|++|+++|+|||+|+++++|||++|++
T Consensus 141 ----~~~~~~~~-~~~~a~~ia~v~~~~s~~~~~~~~~~~~~~~d~n~El~a~G~aNi~s~~~gg~p~~~s~srs~~~~~ 215 (280)
T PF00916_consen 141 ----ISWSLILD-LLPTALAIAIVGFIESLLIAKSIAKKTGYRIDPNQELIALGLANIVSGLFGGMPGSGSFSRSAVNYR 215 (280)
T ss_pred ----cccccccc-cchhHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHhhhccccchhhcccccccccccchHHHh
Confidence 14555444 444568999999999999999999 67899999999999999999999999999999999999999
Q ss_pred cCcCchhHHHHHHHHHHHHHHHhhHHHhhhhHHHHHHHHHHHHhhhccHHHHHHhhccCccchHH
Q psy18113 352 SGVQTTLGGLYTSIIVLLSLSLLTPYLQYIPQASLAAVLVCAVLTLVEIEIMAVLWKTNKRNFLT 416 (542)
Q Consensus 352 ~GarT~la~i~~a~~~ll~ll~~~~ll~~iP~~vLa~ili~~~~~li~~~~~~~l~~~~~~d~~v 416 (542)
+|||||++++++++++++++++++|+++|+|+++||+++++++++|+|+++++++||.+|.|+.+
T Consensus 216 ~Ga~t~~s~~~~~~~~l~~l~~~~~~l~~iP~~~La~ili~~~~~l~~~~~~~~~~~~~~~d~~i 280 (280)
T PF00916_consen 216 AGARTRLSGLISALFVLLVLLFLAPLLAYIPKAVLAAILIVVGISLIDWSSLRRLWRVSKADFLI 280 (280)
T ss_pred cCcceeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhcCChhheEC
Confidence 99999999999999999999999999999999999999999999999999999999999999863
No 6
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=99.96 E-value=2.4e-27 Score=243.31 Aligned_cols=382 Identities=17% Similarity=0.224 Sum_probs=290.9
Q ss_pred hhhhhhcccccccCCCCChhhhhHhHHHHHHHHHHHHHHHHHHHHH--------hCCCcc----hhhHHhHHHHHHHhhh
Q psy18113 6 TELLHRKVPILAWLPKYNVNAAVSDVLAGITVGLTLIPQAIAYASL--------AGLNPK----YGLYSSIFGGVMYIFL 73 (542)
Q Consensus 6 ~~~~~~~~p~~~wl~~y~~~~l~~Di~aGi~~~~~~iP~~~aya~l--------ag~pp~----~gl~~~~~~~ii~~lf 73 (542)
++.+.++|.+ +-+.+++|+|++||+|+++ +|+|-.. +|+|.. ....++.++++.++++
T Consensus 3 ~~~~~~~F~l-----~~~~t~vrtEiiAGlTTFl-----tM~YIl~VnP~IL~~ag~~~~av~~AT~l~a~~gs~~mgl~ 72 (436)
T COG2252 3 KGDLDRFFKL-----KEHGTTVRTEVIAGLTTFL-----TMAYIVFVNPQILGAAGMPVGAVFVATCLAAAIGSIAMGLY 72 (436)
T ss_pred hhHHHHHhCc-----cccCchHHHHHHHHHHHHH-----HHHHhheecHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 4455555533 1258999999999999999 7888543 677753 3466788999999999
Q ss_pred cCCCccccchhHHHHHHHHHhhhc--CCHHHHHHHHHHHHHHHHHHHhhhhch-hhhhcchhHHHHHHHHHHHHHHHHhh
Q psy18113 74 GTTKQLSVGPTSIMALLCLTYTHD--TSLEMVAFLTFLTGLVQLTCGLLSLGF-VVEFVSLPVVSGFTSSTAIIMASSQL 150 (542)
Q Consensus 74 gss~~~~~Gp~~~~~~~~~~~~~~--~~~~~~~~~~~l~Gii~~llg~~rlg~-l~~~ip~~V~~Gf~~gigl~i~~~ql 150 (542)
.+.|....-..+..+.+..+++.. .+||.+..+.|++|+++++++++++++ +.|.+|+++..|..+|+|++|..-.+
T Consensus 73 An~P~alapgmglnAfFaftvv~~~gi~wq~AL~aVF~sGiif~ils~t~iR~~ii~~IP~~lk~ai~aGIGlFia~IgL 152 (436)
T COG2252 73 ANLPIALAPGMGLNAFFAFTVVLGMGLSWQVALGAVFLSGIIFLLLSLTGIREWIINAIPRSLKLAIGAGIGLFIALIGL 152 (436)
T ss_pred HcCchhhcchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 998887644566777777777654 469999999999999999999999955 89999999999999999999998888
Q ss_pred hhhhCcccCCCcHHHHHHHHHhccCCCchhhHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchh
Q psy18113 151 KYFLGIQFKPKNFLDMYVQLFKNIGKTKYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAF 230 (542)
Q Consensus 151 ~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 230 (542)
+ -.|+-..++ .....+++.+.+..++++..+++...+...+-+.. .++
T Consensus 153 ~-~~Givv~~~-------~tlv~LG~~~~p~vll~i~G~~l~~~L~~~~i~Ga------------------------ili 200 (436)
T COG2252 153 K-NAGIVVANP-------ATLVALGDFTSPGVLLAILGLLLIIVLVSRKIKGA------------------------ILI 200 (436)
T ss_pred h-hCCeEEecC-------cceEEeecCCCchHHHHHHHHHHHHHHHHhhccHh------------------------hhH
Confidence 7 455532221 11344566666778888888777777665442211 234
Q ss_pred HHHHHHHHHHHHhcCCCccCeeEecccCCCCCCCCCCCCccccCCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy18113 231 ILMGCAIITYVLKNTHEKVPFALVGNIESGFPSLAFPPTHININGTDLGLLDMVSHLNTGIFLVPLVGLVANVAIAKAFS 310 (542)
Q Consensus 231 ~vi~~~~i~~~~~~~~~~~~~~~~g~ip~~~p~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a 310 (542)
.++..+.+++.++......+. .+..|+-.|.+...|+. ++ .......+..++..++.++++.++-...+
T Consensus 201 ~i~~~t~~g~~~g~~~~~~~~--~~~~p~~~~~~~~~d~~--------~~-~~~~~~~~~if~f~~~~~FD~~GTl~gv~ 269 (436)
T COG2252 201 GILVTTILGIILGIDVHFGGL--VGAPPSLSPIFGQLDLS--------GN-LSLAAFAPVIFTFFFVDLFDTLGTLIGVA 269 (436)
T ss_pred HHHHHHHHHHHhccccccccc--ccCCCCccchhhHhhhc--------cc-hhhHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 566677788877743221111 23333322222211221 00 11122333457788889999988776666
Q ss_pred --------CCCccCCChhHHHHhhhhhHhhhhCCCCCccchhhhHHhhhcCcCchhHHHHHHHHHHHHHHHhhHHHhhhh
Q psy18113 311 --------EGKIVDASQEMIALGMGNLAGSFINAMPVASSFSRSAVNNASGVQTTLGGLYTSIIVLLSLSLLTPYLQYIP 382 (542)
Q Consensus 311 --------~~~~~d~n~EL~a~G~aNivs~~fG~~p~~~s~srS~~~~~~GarT~la~i~~a~~~ll~ll~~~~ll~~iP 382 (542)
+|+..|.+|-+.+++++.++|+++|+.|++ ++-+|+.....|+||.++++++++++++. +|++|+...+|
T Consensus 270 ~~ag~~~~~g~~~~~~~al~~D~v~t~~ga~~GtS~~t-~yIESaaGva~GgrTGltavv~g~lFl~~-lf~~Pl~~~vP 347 (436)
T COG2252 270 SKAGLLDKNGKMPRIGKALLADSVATVVGALFGTSTVT-AYIESAAGVAAGGRTGLTAVVTGLLFLLS-LFFSPLAALVP 347 (436)
T ss_pred HhcCCcCCCCCccccchHHHHhHHHHHHHHhcCCcchh-hhhhcccccccccccccHHHHHHHHHHHH-HHHHHHHHhCc
Confidence 223458999999999999999999999988 89999999999999999999999999999 69999999999
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHhhccCccchHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy18113 383 QASLAAVLVCAVLTLVEIEIMAVLWKTNKRNFLTLVVTFAACLLIGIEIGLLCGICLDIFNLLHF 447 (542)
Q Consensus 383 ~~vLa~ili~~~~~li~~~~~~~l~~~~~~d~~v~~~t~~~~l~~~~~~Gi~~Gi~~s~~~~~~~ 447 (542)
..+.++.++++|..|. +.+.+.+|+|+...+..|.+.+++.+++.|.-|+.++++.|..-
T Consensus 348 ~~AtapaLi~vG~lM~-----~~v~~id~~d~~ea~PaF~tiv~mplTySIa~Gia~Gfi~y~i~ 407 (436)
T COG2252 348 GYATAPALIIVGALML-----SSVKQIDWSDFTEAVPAFLTIVMMPLTYSIADGIAFGFISYVIL 407 (436)
T ss_pred HhhhhHHHHHHHHHHH-----hhhccCCchhhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 9999999999999999 67889999999999999999999999999999999998887753
No 7
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=99.96 E-value=6.4e-27 Score=247.34 Aligned_cols=321 Identities=18% Similarity=0.221 Sum_probs=237.4
Q ss_pred HHHHHHHHHHHHHHhCCCc-------chhhHHhHHHHHHHh----hhcCCCccccchhHHHHHHHHHhhhcCCHHHHHHH
Q psy18113 38 GLTLIPQAIAYASLAGLNP-------KYGLYSSIFGGVMYI----FLGTTKQLSVGPTSIMALLCLTYTHDTSLEMVAFL 106 (542)
Q Consensus 38 ~~~~iP~~~aya~lag~pp-------~~gl~~~~~~~ii~~----lfgss~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~ 106 (542)
+.+.+|.-++-+ .|+|+ ...+.++.+++++.. .+|++.++..||.............+++++.+...
T Consensus 11 ~~i~~p~i~~~a--~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga 88 (406)
T TIGR03173 11 GAVAVPLIVGGA--LGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGA 88 (406)
T ss_pred HHHHHHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHH
Confidence 445566555532 58887 567889999999996 57899898999976544433334456889999999
Q ss_pred HHHHHHHHHHHHhhhhchhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccCCCcHHHHHHHHHhccCCCchhhHHHHH
Q psy18113 107 TFLTGLVQLTCGLLSLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFKPKNFLDMYVQLFKNIGKTKYSDLSLGV 186 (542)
Q Consensus 107 ~~l~Gii~~llg~~rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 186 (542)
.+++|++++++|. +++++.|++|+.|.+.++..+|+.+...+++...|.+... +..++..+.+++
T Consensus 89 ~~v~Gii~illg~-~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~~~~~--------------~~~~~~~~~l~l 153 (406)
T TIGR03173 89 VIVAGLFVILLAP-FFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGGAGAP--------------DFGSPQNLGLAL 153 (406)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccCCCcc--------------cccchHHHHHHH
Confidence 9999999999994 7899999999999888999999999999988876543111 123455667788
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHHHHHhcCCCccCeeEecccCC-CCC---
Q psy18113 187 ACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIITYVLKNTHEKVPFALVGNIES-GFP--- 262 (542)
Q Consensus 187 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~~~~~~~~~~~g~ip~-~~p--- 262 (542)
.+++++++++++.|+.. +. +..++.+++++++++.++..+ .+.+++.|. .+|
T Consensus 154 ~~l~~~il~~~~~~~~~-------------~~-------~aiLi~ivvg~iva~~~g~~~----~~~i~~~~~~~~P~~~ 209 (406)
T TIGR03173 154 LTLVIILLLNRFGKGFL-------------RS-------IAVLLGLVVGTIVAAALGMVD----FSGVAEAPWFALPTPF 209 (406)
T ss_pred HHHHHHHHHHHHhhhHH-------------HH-------hHHHHHHHHHHHHHHHhcCCC----chhhccCCeeeCCCCC
Confidence 88888777776654321 00 003567788888888776532 122222221 122
Q ss_pred CCCCCCCccccCCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc--CCC---ccCCChhHHHHhhhhhHhhhhCCC
Q psy18113 263 SLAFPPTHININGTDLGLLDMVSHLNTGIFLVPLVGLVANVAIAKAFS--EGK---IVDASQEMIALGMGNLAGSFINAM 337 (542)
Q Consensus 263 ~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a--~~~---~~d~n~EL~a~G~aNivs~~fG~~ 337 (542)
++..|+| ||..+.. ++.+++++++|++++.++.+ .|+ +.|.|||+.++|++|+++|+||++
T Consensus 210 ~~~~P~f---------~~~~~~~-----~~~~~lv~~~esig~~~a~~~~~g~~~~~~~~~~~l~~~Gi~~i~aglfG~~ 275 (406)
T TIGR03173 210 HFGAPTF---------DLVAILT-----MIIVYLVSMVETTGDFLALGEITGRPITEKDLAGGLRADGLGSALGGLFNTF 275 (406)
T ss_pred cCCCCee---------CHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhCCCCCchhccchHHhccHHHHHHHHhCCC
Confidence 2445555 4554432 45688999999999888877 343 345689999999999999999999
Q ss_pred CCccchhhhHHhhhcCcCchhHHHHHHHHHHHHHHH--hhHHHhhhhHHHHHHHHHHHHhhhccHHHHHHhhccCccch
Q psy18113 338 PVASSFSRSAVNNASGVQTTLGGLYTSIIVLLSLSL--LTPYLQYIPQASLAAVLVCAVLTLVEIEIMAVLWKTNKRNF 414 (542)
Q Consensus 338 p~~~s~srS~~~~~~GarT~la~i~~a~~~ll~ll~--~~~ll~~iP~~vLa~ili~~~~~li~~~~~~~l~~~~~~d~ 414 (542)
|.++...+++++..+|+|||+++++++++++++.++ ++++++++|+++++++++ +.++++....++.++|.+++|.
T Consensus 276 p~t~~~~~~~~~~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~~l-~~~~~i~~~g~~~l~~~~~~~~ 353 (406)
T TIGR03173 276 PYTSFSQNVGLVQLTGVKSRYVVAAAGVILVLLGLFPKLAALVASIPQPVLGGAGL-VMFGMVAASGIRILSKVDFDRR 353 (406)
T ss_pred CCcchhhhHHHHHHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHHHhCcccCc
Confidence 988644446788889999999999999998888766 899999999999999766 5999998888888877765443
No 8
>PRK10720 uracil transporter; Provisional
Probab=99.95 E-value=1.7e-25 Score=236.54 Aligned_cols=356 Identities=15% Similarity=0.174 Sum_probs=257.7
Q ss_pred HHHHHHHHHHHHHHhCCCcchhhHHhHHHHHHHhhhcC-CCccccchhHHH-HHHHHHhhhcCCHHHHHHHHHHHHHHHH
Q psy18113 38 GLTLIPQAIAYASLAGLNPKYGLYSSIFGGVMYIFLGT-TKQLSVGPTSIM-ALLCLTYTHDTSLEMVAFLTFLTGLVQL 115 (542)
Q Consensus 38 ~~~~iP~~~aya~lag~pp~~gl~~~~~~~ii~~lfgs-s~~~~~Gp~~~~-~~~~~~~~~~~~~~~~~~~~~l~Gii~~ 115 (542)
+.+.+|.-+ |+++...+..+.+++++..+++. +-+...||+... +.+... . ..+++.+....+++|++++
T Consensus 30 ~~i~~Pli~------gl~~~~~l~~sGi~TliQ~~~~g~rlP~~~G~sfa~i~~~~~~-~-~~~~~~~lgav~v~Glv~i 101 (428)
T PRK10720 30 ATVLVPILF------HINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLL-L-PLGYEVALGGFIMCGVLFC 101 (428)
T ss_pred HHHHHHhhc------CCCHHHHHHHHHHHHHHHHHhccCccceEEeCcHHHHHHHHHH-H-HccHHHHHHHHHHHHHHHH
Confidence 556666633 89998899999999999998775 556667885443 333322 2 2589999999999999999
Q ss_pred HHHhh--hh--chhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccCCCcHHHHHHHHHhccCCCchhhHHHHHHHHHH
Q psy18113 116 TCGLL--SL--GFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFKPKNFLDMYVQLFKNIGKTKYSDLSLGVACVVL 191 (542)
Q Consensus 116 llg~~--rl--g~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~ 191 (542)
+++++ |+ +++.+++|+.|++.+++.+|+.+....++. .|...+.. +..+++.+.+++.++++
T Consensus 102 lls~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~~-~g~~~~~~-------------~~~~~~~~~lalv~l~i 167 (428)
T PRK10720 102 LVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGM-AGLLPAEG-------------QTPDSKTIIISMVTLAV 167 (428)
T ss_pred HHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHhh-ccccCCCC-------------cccchHHHHHHHHHHHH
Confidence 99997 44 468899999999999999999998776653 33221111 12455677888888888
Q ss_pred HHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHHHHHhcCCCccCeeEeccc-CCCCCCCCCCCCc
Q psy18113 192 LLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIITYVLKNTHEKVPFALVGNI-ESGFPSLAFPPTH 270 (542)
Q Consensus 192 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~~~~~~~~~~~g~i-p~~~p~~~~P~~~ 270 (542)
+++..++.++.. ++++ .++.+++++++++.++..+ ++.+++. +.++|++..|+|
T Consensus 168 il~~~~~~kg~~-------------~~~~-------iLigIvvG~ila~~lG~~d----~~~v~~a~~~~lP~~~~P~f- 222 (428)
T PRK10720 168 TVLGSVLFRGFL-------------AIIP-------ILIGVLVGYALSFAMGMVD----TTPIIEAHWFALPTFYTPRF- 222 (428)
T ss_pred HHHHHHHhccHH-------------HHhH-------HHHHHHHHHHHHHHhcCCC----HHHhhcCccccCCCCCCCcC-
Confidence 776554443321 1111 3567888888888876532 2223322 245666666766
Q ss_pred cccCCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc--CC----CccCCChhHHHHhhhhhHhhhhCCCCCccchh
Q psy18113 271 ININGTDLGLLDMVSHLNTGIFLVPLVGLVANVAIAKAFS--EG----KIVDASQEMIALGMGNLAGSFINAMPVASSFS 344 (542)
Q Consensus 271 ~~~~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a--~~----~~~d~n~EL~a~G~aNivs~~fG~~p~~~s~s 344 (542)
||..+.. ++..+++.++|++++..+.+ .+ ++.|.|||+.++|++|+++|+||++|++++..
T Consensus 223 --------d~~~il~-----l~~~~lv~~~EsiG~~~a~~~~~~~~~~~~~~~~r~l~adGlatii~glfG~~p~tty~e 289 (428)
T PRK10720 223 --------EWFAILT-----ILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGE 289 (428)
T ss_pred --------cHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccchHhhhhHHHHHHHhcCCCCcccccc
Confidence 4555442 34566677889988777655 12 24588999999999999999999999999888
Q ss_pred hhHHhhhcCcCchhHHHHHHHHHHHHHHH--hhHHHhhhhHHHHHHHHHHHHhhhccHHHHHHhhc--cCcc---chHH-
Q psy18113 345 RSAVNNASGVQTTLGGLYTSIIVLLSLSL--LTPYLQYIPQASLAAVLVCAVLTLVEIEIMAVLWK--TNKR---NFLT- 416 (542)
Q Consensus 345 rS~~~~~~GarT~la~i~~a~~~ll~ll~--~~~ll~~iP~~vLa~ili~~~~~li~~~~~~~l~~--~~~~---d~~v- 416 (542)
+..+...+|.++|....+++++++++.++ ++++++.+|.++++|+.+ +.++++....++.+++ .+.. +..+
T Consensus 290 n~g~ia~T~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i-~~fg~i~~~Gi~~l~~~~~~~~~~~n~~i~ 368 (428)
T PRK10720 290 NIGVMAITRVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSL-LLYGVIGASGIRVLIESKVDYNKAQNLILT 368 (428)
T ss_pred ccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHHHHccCCCCcccchhHH
Confidence 88888889999998888888877777644 899999999999999887 8999999999999954 3322 1231
Q ss_pred ----------HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCcee
Q psy18113 417 ----------LVVTFAACLLIGIEIGLLCGICLDIFNLLHFNARPNVH 454 (542)
Q Consensus 417 ----------~~~t~~~~l~~~~~~Gi~~Gi~~s~~~~~~~~~r~~~~ 454 (542)
...++...+..|+..|.++|+++++++..+|..|++-+
T Consensus 369 ~~~l~~g~~~~~~~~~~~~~~gi~~g~~~ai~Lnlll~~~~~~~~~~~ 416 (428)
T PRK10720 369 SVILIIGVSGAKVNIGAAELKGMALATIVGIGLSLIFKLISKLRPEEE 416 (428)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhcccccccCCcc
Confidence 12223334446888899999999999999888887643
No 9
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=99.95 E-value=8.5e-25 Score=231.15 Aligned_cols=325 Identities=14% Similarity=0.188 Sum_probs=242.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCc-------chhhHHhHHHHHHHhhhcCCC---ccccchh-HHHHHHHHHhhhcCCHHHHH
Q psy18113 36 TVGLTLIPQAIAYASLAGLNP-------KYGLYSSIFGGVMYIFLGTTK---QLSVGPT-SIMALLCLTYTHDTSLEMVA 104 (542)
Q Consensus 36 ~~~~~~iP~~~aya~lag~pp-------~~gl~~~~~~~ii~~lfgss~---~~~~Gp~-~~~~~~~~~~~~~~~~~~~~ 104 (542)
..+.+.+|.-++-+. +++ +..+.++.+++++.++.+..+ ....|+. +.++..... ..+++++.+.
T Consensus 19 ~~~~i~~p~iv~~~~---l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~-~~~~~~~~~~ 94 (415)
T TIGR00801 19 FGGTVLVPLLVGLAP---LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAI-GSGLGIPAIM 94 (415)
T ss_pred HHHHHHHHHHHhccc---CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHH-HhccCHHHHH
Confidence 345677777776555 343 457889999999999988766 5566886 444433322 2457889999
Q ss_pred HHHHHHHHHHHHHHhh--hh--chhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccCCCcHHHHHHHHHhccCCCchh
Q psy18113 105 FLTFLTGLVQLTCGLL--SL--GFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFKPKNFLDMYVQLFKNIGKTKYS 180 (542)
Q Consensus 105 ~~~~l~Gii~~llg~~--rl--g~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~ 180 (542)
...+++|+++.+++.+ |+ +++.|++|+.|.+.++.++|+.+...+++.+.|...++++ .+..|+.
T Consensus 95 g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~~~-----------~~~~~~~ 163 (415)
T TIGR00801 95 GALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAMSS-----------ATYGSLE 163 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCcccc-----------cccCchh
Confidence 9999999999999985 54 4579999999999999999999999999998776542111 0122455
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHHHHHhcCCCccCeeEecccC-C
Q psy18113 181 DLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIITYVLKNTHEKVPFALVGNIE-S 259 (542)
Q Consensus 181 ~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~~~~~~~~~~~g~ip-~ 259 (542)
.+.+++.+++++++++|+.++.. +... .++.+++++++++.++..+. .+ +.+.| .
T Consensus 164 ~~~vg~~~l~~~vl~~~~~~g~~-------------~~~a-------iLigiv~g~i~a~~lg~~~~-~~---v~~~~~~ 219 (415)
T TIGR00801 164 NLGVAFVVLALIILLNRFGKGFL-------------KSIS-------ILIGILVGYILALFMGIVDF-SP---VIDAPWF 219 (415)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHH-------------HHHH-------HHHHHHHHHHHHHHcCCccc-hh---hccCccc
Confidence 67889999888878777654321 0100 45677888888887764322 11 22222 1
Q ss_pred CCCCCCCCCCccccCCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc--CCCc----cCCChhHHHHhhhhhHhhh
Q psy18113 260 GFPSLAFPPTHININGTDLGLLDMVSHLNTGIFLVPLVGLVANVAIAKAFS--EGKI----VDASQEMIALGMGNLAGSF 333 (542)
Q Consensus 260 ~~p~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a--~~~~----~d~n~EL~a~G~aNivs~~ 333 (542)
++|++..|. .++||..+. .++.+++++++|++++.++++ .|++ .+.|||+.++|++|+++|+
T Consensus 220 ~lP~~~~~g-------~~f~~~~~~-----~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~agl 287 (415)
T TIGR00801 220 SLPTPFTFG-------PSFEWPAIL-----TMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLLAGL 287 (415)
T ss_pred ccCCccCCC-------ceecHHHHH-----HHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHHHHh
Confidence 233333221 122554333 346788999999999998877 3443 3468999999999999999
Q ss_pred hCCCCCccchhhhHHhhhcCcCchhHHHHHHHHHHHHHHH--hhHHHhhhhHHHHHHHHHHHHhhhccHHHHHHhhccCc
Q psy18113 334 INAMPVASSFSRSAVNNASGVQTTLGGLYTSIIVLLSLSL--LTPYLQYIPQASLAAVLVCAVLTLVEIEIMAVLWKTNK 411 (542)
Q Consensus 334 fG~~p~~~s~srS~~~~~~GarT~la~i~~a~~~ll~ll~--~~~ll~~iP~~vLa~ili~~~~~li~~~~~~~l~~~~~ 411 (542)
||++|.+++..|++++..+|.+||.+..+++++++++.++ ++++++++|.++++++.+ +.++++....++.+++.+.
T Consensus 288 fG~~p~t~~sen~g~~~~T~~~sr~~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~~l-~~~~~i~~~gi~~l~~~~~ 366 (415)
T TIGR00801 288 FGGFPNTTFAQNIGVIALTRVASRWVIVGAAVILIALGFFPKIAALITSIPSPVLGGASI-VMFGMIAASGIRILIRNKL 366 (415)
T ss_pred cCCCCCcchhhhheeeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHHHhCcc
Confidence 9999999999999999999999999999999999999999 999999999999999877 8899998888888887654
Q ss_pred c
Q psy18113 412 R 412 (542)
Q Consensus 412 ~ 412 (542)
+
T Consensus 367 ~ 367 (415)
T TIGR00801 367 D 367 (415)
T ss_pred C
Confidence 4
No 10
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=99.91 E-value=1.1e-24 Score=175.85 Aligned_cols=82 Identities=46% Similarity=0.891 Sum_probs=79.7
Q ss_pred ccccccCCCCC-hhhhhHhHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHhHHHHHHHhhhcCCCccccchhHHHHHHH
Q psy18113 13 VPILAWLPKYN-VNAAVSDVLAGITVGLTLIPQAIAYASLAGLNPKYGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLC 91 (542)
Q Consensus 13 ~p~~~wl~~y~-~~~l~~Di~aGi~~~~~~iP~~~aya~lag~pp~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~ 91 (542)
+|+++|+++|+ |+++++|++||++++++++||+||||.+||+||.+|||++++++++|++||+||++++||++.+++++
T Consensus 1 ~P~l~wl~~y~~k~~~~~D~~aGltva~~~iPq~~a~A~lAg~pp~~GLy~a~~~~liyalfG~s~~~~~Gp~a~~s~l~ 80 (84)
T PF13792_consen 1 FPILQWLPRYSWKSNLRGDLLAGLTVALVAIPQGMAYALLAGVPPIYGLYAAIIPPLIYALFGSSRHMIVGPTAAMSLLI 80 (84)
T ss_pred CCchhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeeeHHHHHHHHHHhhccCCCccccChHHHHHHHH
Confidence 69999999999 59999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHh
Q psy18113 92 LTY 94 (542)
Q Consensus 92 ~~~ 94 (542)
+++
T Consensus 81 ~~~ 83 (84)
T PF13792_consen 81 ASV 83 (84)
T ss_pred HHh
Confidence 865
No 11
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=99.90 E-value=1.2e-20 Score=199.63 Aligned_cols=324 Identities=15% Similarity=0.234 Sum_probs=216.3
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHhHHHHHHHh-hhcCCCccccchhHHHH-HHHHHh-hh----cC
Q psy18113 26 AAVSDVLAGITVGLTLIPQAIAYASLAGLNPKYGLYSSIFGGVMYI-FLGTTKQLSVGPTSIMA-LLCLTY-TH----DT 98 (542)
Q Consensus 26 ~l~~Di~aGi~~~~~~iP~~~aya~lag~pp~~gl~~~~~~~ii~~-lfgss~~~~~Gp~~~~~-~~~~~~-~~----~~ 98 (542)
.+++++..|+.-.+...--.++...+-|+++...+.++.+++++.. .+|+.-+...|++.... .+.... .. +.
T Consensus 28 p~~~~~~~GlQh~lam~~~~v~~Plilgl~~~~tl~~sGi~TllQ~~~~G~rlP~v~G~sf~f~~~~~~~~~~~~~~~~~ 107 (429)
T TIGR03616 28 PAAQTIVMGLQHAVAMFGATVLMPLLMGFDPNLTILMSGIGTLLFFLITGGRVPSYLGSSAAFVGAVIAATGYNGQGTNP 107 (429)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHhCCCceeEEcCcHHHHHHHHHHHhhcccCCcc
Confidence 4567899999888754433444444458999899999999999997 57888888889976543 222221 11 12
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhhh----chhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccCCCcHHHHHHHHHhcc
Q psy18113 99 SLEMVAFLTFLTGLVQLTCGLLSL----GFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFKPKNFLDMYVQLFKNI 174 (542)
Q Consensus 99 ~~~~~~~~~~l~Gii~~llg~~rl----g~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~~~~~l 174 (542)
+.+.+...++++|++++++|++++ +++.|++|+.|.+-.+..+|+.++...++...+- + +
T Consensus 108 ~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~~~~~-----~-~---------- 171 (429)
T TIGR03616 108 NIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSAS-----G-F---------- 171 (429)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhcccc-----c-c----------
Confidence 457788999999999999999876 5588899999999999999998887666642211 1 0
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHHHHHhcC-C--CccCe
Q psy18113 175 GKTKYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIITYVLKNT-H--EKVPF 251 (542)
Q Consensus 175 ~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~~-~--~~~~~ 251 (542)
.++. ++.+++.+.+..++.+.. .+++. .++.+++++++++.+... + +..+.
T Consensus 172 --~~~~----al~tl~~i~l~~l~~~~~-------------l~~~a-------vLiGivvG~iva~~l~~~~g~~~~vd~ 225 (429)
T TIGR03616 172 --DSWM----AVLTILCIGAVAVFTRGM-------------LQRLL-------ILVGLIAAYLAYFILTNVFGLGKAVDF 225 (429)
T ss_pred --ccHH----HHHHHHHHHHHHHHHHHH-------------HHHHH-------HHHHHHHHHHHHHHHhhhcCCCccccC
Confidence 1121 222222222222222211 11111 355677777776654210 0 00222
Q ss_pred eEe-cccCCCCCCCCCCCCccccCCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc--CCCccC--CChhHHHHhh
Q psy18113 252 ALV-GNIESGFPSLAFPPTHININGTDLGLLDMVSHLNTGIFLVPLVGLVANVAIAKAFS--EGKIVD--ASQEMIALGM 326 (542)
Q Consensus 252 ~~~-g~ip~~~p~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a--~~~~~d--~n~EL~a~G~ 326 (542)
+.+ +.-.-++|++..|+| ||..+.. ++..+++.++|+++...+.+ .+++.| .|||+.++|+
T Consensus 226 s~v~~a~~~~lP~~~~p~f---------~~~~il~-----~~~~~lv~~~esiG~~~a~~~~~~~~~~~~i~r~l~adGl 291 (429)
T TIGR03616 226 SPISQAAWFGLPNFHTPVF---------NANAMLL-----IAPVALILVAENLGHFKAVAGMTGRNLDPYMGRAFVGDGL 291 (429)
T ss_pred cccccCccccCCcCCCceE---------cHHHHHH-----HHHHHHHHHHHhhHHHHHHHHHhCCCCCchhccchhhhhH
Confidence 222 111124555555544 5555432 35667889999998888877 344444 4899999999
Q ss_pred hhhHhhhhCCCCCccchhhhHHhhhcCcCchhHHHHHHHHHHHHHHH--hhHHHhhhhHHHHHHHHHHHHhhhccHHHHH
Q psy18113 327 GNLAGSFINAMPVASSFSRSAVNNASGVQTTLGGLYTSIIVLLSLSL--LTPYLQYIPQASLAAVLVCAVLTLVEIEIMA 404 (542)
Q Consensus 327 aNivs~~fG~~p~~~s~srS~~~~~~GarT~la~i~~a~~~ll~ll~--~~~ll~~iP~~vLa~ili~~~~~li~~~~~~ 404 (542)
+|+++|+||+.|.+.+..+..+...+|.+||.....++++++++.++ ++.+++.||.++++|+++ +.++++....++
T Consensus 292 ~t~~agl~g~~p~tt~~en~g~i~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i-~~fg~i~~~Gi~ 370 (429)
T TIGR03616 292 ATMLSGSVGGTGVTTYAENIGVMAVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASI-VVFGLIAVAGAR 370 (429)
T ss_pred HHHHHHhcCCCCCcceeeeeeeeeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHH
Confidence 99999999999999887777777888888888777777665555433 334999999999999887 899999888888
Q ss_pred Hh
Q psy18113 405 VL 406 (542)
Q Consensus 405 ~l 406 (542)
.+
T Consensus 371 ~l 372 (429)
T TIGR03616 371 IW 372 (429)
T ss_pred HH
Confidence 54
No 12
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=99.83 E-value=2.1e-18 Score=178.96 Aligned_cols=307 Identities=13% Similarity=0.152 Sum_probs=227.5
Q ss_pred chhhHHhHHHHHHHhh----hcCCCccccchhHHHHHHHHHhhhcCC--HHHHHHHHHHHHHHHHHHHhhhhchhhhhcc
Q psy18113 57 KYGLYSSIFGGVMYIF----LGTTKQLSVGPTSIMALLCLTYTHDTS--LEMVAFLTFLTGLVQLTCGLLSLGFVVEFVS 130 (542)
Q Consensus 57 ~~gl~~~~~~~ii~~l----fgss~~~~~Gp~~~~~~~~~~~~~~~~--~~~~~~~~~l~Gii~~llg~~rlg~l~~~ip 130 (542)
.+.|.+|.++++++.+ +|+.-+...|.+.........+.++++ .+.+....+.+|++.++++.+--.|+.|++|
T Consensus 56 s~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfP 135 (451)
T COG2233 56 SADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFP 135 (451)
T ss_pred HHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3459999999999998 344445556775544333333344444 7888899999999999998873339999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCcccCCCcHHHHHHHHHhccCCCchhhHHHHHHHHHHHHHHHHhhhcccCCCCCCc
Q psy18113 131 LPVVSGFTSSTAIIMASSQLKYFLGIQFKPKNFLDMYVQLFKNIGKTKYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPG 210 (542)
Q Consensus 131 ~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~ 210 (542)
+-|.+-++.-+|+.++...++.+.|.+...++ -+..+...+.+++.++++.++..++.+...
T Consensus 136 PvVtG~Vi~~IGlsL~~vai~~~~G~~~~~~~-----------~~~~~~~~l~la~~tl~~il~~~~f~~g~~------- 197 (451)
T COG2233 136 PVVTGPVVLVIGLSLAPVAINMAGGGPGAAGN-----------PDFGSLENLGLALVTLLIILLINRFGKGFL------- 197 (451)
T ss_pred CceEEeEeeeehhhhHHHHHHHhhCCCCCCCC-----------cccCchhHHHHHHHHHHHHHHHHHHhhhHH-------
Confidence 99999999999999999999999998743221 022445567888999888888888775432
Q ss_pred hhhhhhhhhHHHhhcccchhHHHHHHHHHHHHhcCCCccCeeEecccCCCCCCCCCCCCccccCCCcCcHHHHHHhhhhH
Q psy18113 211 VKIKYLKSFLWFISTGRNAFILMGCAIITYVLKNTHEKVPFALVGNIESGFPSLAFPPTHININGTDLGLLDMVSHLNTG 290 (542)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~~~~~~~~~~~g~ip~~~p~~~~P~~~~~~~~~~~~~~~~~~~l~~~ 290 (542)
+.++ .++.+++++++++..+..+. +.+ .+ .|.+++|.+.. ... .+||..++.
T Consensus 198 ------~~i~-------ILiGlv~G~~la~~~G~vdf-~~v---~~----a~w~~~P~~~~-fg~-~F~~~ail~----- 249 (451)
T COG2233 198 ------RRIP-------ILIGLVVGYLLALFMGMVDF-SGV---AE----APWFALPTPFY-FGM-AFDWGAILT----- 249 (451)
T ss_pred ------HHHH-------HHHHHHHHHHHHHHhCCcCc-ccc---cc----CceeeCCcccC-CCe-eecHHHHHH-----
Confidence 2222 45677888888888774332 222 22 22333333221 000 347877665
Q ss_pred HHHHHHHHHHHHHHHHHHhc--CCC----ccCCChhHHHHhhhhhHhhhhCCCCCccchhhhHHhhhcCcCchhHHHHHH
Q psy18113 291 IFLVPLVGLVANVAIAKAFS--EGK----IVDASQEMIALGMGNLAGSFINAMPVASSFSRSAVNNASGVQTTLGGLYTS 364 (542)
Q Consensus 291 ~~~ia~v~~~es~~~~~~~a--~~~----~~d~n~EL~a~G~aNivs~~fG~~p~~~s~srS~~~~~~GarT~la~i~~a 364 (542)
+..++++.+.|+.+.-++.+ .|+ +.+.+|-++++|++++++|+||++|.|....+..+...+|.+||.....++
T Consensus 250 m~~v~iV~~~E~~G~i~A~~~itg~~~~~~~~l~rg~~aDGlat~iag~fg~~p~TtfaqNiGvv~lT~v~Sr~V~~~aa 329 (451)
T COG2233 250 MLPVAIVTIVEHTGDITATGEITGRDLDGKPRLRRGLLADGLATLIAGLFGGFPNTTFAQNIGVVALTGVYSRYVIAGAA 329 (451)
T ss_pred HHHHHHHHHHHHhhhhhhHHhHhCCcCccCcccccceeeccHHHHHHHhcCCCCCCchhhceeeeeeccCChhHHHHHHH
Confidence 45688999999998776666 222 367889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH--hhHHHhhhhHHHHHHHHHHHHhhhccHHHHHHhhccC
Q psy18113 365 IIVLLSLSL--LTPYLQYIPQASLAAVLVCAVLTLVEIEIMAVLWKTN 410 (542)
Q Consensus 365 ~~~ll~ll~--~~~ll~~iP~~vLa~ili~~~~~li~~~~~~~l~~~~ 410 (542)
++.+++-++ ++.+++.||.+|++| ...+.++++-...++.+-|.+
T Consensus 330 vili~lgl~pk~~al~~sIP~pVlGG-a~ivmFG~Ia~sGir~l~~~~ 376 (451)
T COG2233 330 VILILLGLFPKFGALIQSIPSPVLGG-AMLVLFGMIAASGIRILIRNK 376 (451)
T ss_pred HHHHHHHhhHHHHHHHHhCChhhhhH-HHHHHHHHHHHHHHHHHHhcc
Confidence 988888766 788999999999999 566688888777777776654
No 13
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=99.83 E-value=4e-18 Score=179.28 Aligned_cols=339 Identities=15% Similarity=0.182 Sum_probs=200.8
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHH----hCCC------cchhhHHhHHHHHHHhh-hcCCCccccchhHHHHHHHHHh-h
Q psy18113 28 VSDVLAGITVGLTLIPQAIAYASL----AGLN------PKYGLYSSIFGGVMYIF-LGTTKQLSVGPTSIMALLCLTY-T 95 (542)
Q Consensus 28 ~~Di~aGi~~~~~~iP~~~aya~l----ag~p------p~~gl~~~~~~~ii~~l-fgss~~~~~Gp~~~~~~~~~~~-~ 95 (542)
++++++|+...+...+..+....+ .|.+ ....+..+.+++++.++ +|..-.+..||....-...... .
T Consensus 1 ~~~i~~glQ~~l~m~~~~iv~P~il~~~~g~~~~~~~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~~~~~~~g 80 (389)
T PF00860_consen 1 GKEILLGLQHFLAMFYIIIVVPLILAAAFGLDADTAALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIFAFMIVIG 80 (389)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTTS-----------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHHHHHGGG-
T ss_pred CccHHHHHHHHHHHHHHHHHhHHHHhhcccccchhhHHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhhhhhcccc
Confidence 478899999887544433333322 1321 24568889999999999 7887777778854321111111 1
Q ss_pred ----hcCCHHHHHHHHHHHHHHHHHHHhhhhc-hhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccCCCcHHHHHHHH
Q psy18113 96 ----HDTSLEMVAFLTFLTGLVQLTCGLLSLG-FVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFKPKNFLDMYVQL 170 (542)
Q Consensus 96 ----~~~~~~~~~~~~~l~Gii~~llg~~rlg-~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~~ 170 (542)
.+++++.+....+++|+++++++++++. ++.|++|+.|..+++.++|+.+....++...|.....+.
T Consensus 81 ~~~~~~~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~~~-------- 152 (389)
T PF00860_consen 81 MAESGGYGLQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNPDG-------- 152 (389)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---BTT--------
T ss_pred cccchhhchhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhccccccccccc--------
Confidence 2356788999999999999999999984 799999999999999999999999999998887743111
Q ss_pred HhccCCCchhhHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHHHHHhcCCCccC
Q psy18113 171 FKNIGKTKYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIITYVLKNTHEKVP 250 (542)
Q Consensus 171 ~~~l~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~~~~~~~ 250 (542)
....+.....++...++..+....+.+++. ++.. .++.+++++++++.++..+. .+
T Consensus 153 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~a-------iligi~~g~i~~~~~g~~~~-~~ 208 (389)
T PF00860_consen 153 ---LLVGDGKNLGLAVLTLLFILLLSLFLKGFL-------------RKGA-------ILIGIIAGWIVAAILGVVDF-SP 208 (389)
T ss_dssp ----B---HHHHHHHHHHHHHHHHHHHSSSTTT-------------TTHH-------HHHHHHHHHHHHHHHHHTTS-SH
T ss_pred ---cccccccccccccccchhhhhhhhhhhhhc-------------cccc-------chhhhhhhhhhhhccccccc-Cc
Confidence 011223334445555555555555443221 1111 34567778888887774322 11
Q ss_pred eeEecccCCCCCCCCCCCCccccCCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc-----CCC-ccCCChhHHHH
Q psy18113 251 FALVGNIESGFPSLAFPPTHININGTDLGLLDMVSHLNTGIFLVPLVGLVANVAIAKAFS-----EGK-IVDASQEMIAL 324 (542)
Q Consensus 251 ~~~~g~ip~~~p~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a-----~~~-~~d~n~EL~a~ 324 (542)
.+.+ .|.+.+|.... +..+.++|..+. .++.++++.++|++++..+.+ +.+ +.+.||-+.++
T Consensus 209 --~~~~----~~~~~~p~~~~-~g~p~f~~~~i~-----~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~~~r~l~~d 276 (389)
T PF00860_consen 209 --SVSS----APWFSLPSPFP-FGWPSFDPGAIL-----TFLIFALVAMFESIGTIVAVARIAGKDDPRPPRIRRGLLAD 276 (389)
T ss_dssp ---HHH----S-SS---------------HHHHH-----HHTHHHHHHHHHHHHHHHHHHHHHTS-TCCCCCHHHHHHHH
T ss_pred --cccc----ccccccccccc-cccccccHHHHH-----HHHHHHHHHhhhhhhhHHHHHHHhCCCCccchhhcccceee
Confidence 0111 12233331100 000111343332 345677889999988777766 122 56789999999
Q ss_pred hhhhhHhhhhCCCCCccchhhhHHhhhcCcCchhHHHHHHHHHHHHHHH--hhHHHhhhhHHHHHHHHH-HHHhhhccHH
Q psy18113 325 GMGNLAGSFINAMPVASSFSRSAVNNASGVQTTLGGLYTSIIVLLSLSL--LTPYLQYIPQASLAAVLV-CAVLTLVEIE 401 (542)
Q Consensus 325 G~aNivs~~fG~~p~~~s~srS~~~~~~GarT~la~i~~a~~~ll~ll~--~~~ll~~iP~~vLa~ili-~~~~~li~~~ 401 (542)
|++|+++|+||+.|.+.+..+.+....+|.+||.+++.++++.+++.++ ++|++..||.++++|..+ ..+.-|. .
T Consensus 277 g~~~~l~gl~G~~~~t~~~en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~i~~--~ 354 (389)
T PF00860_consen 277 GLGTILAGLFGTSPTTTYSENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLVLFGMIMM--S 354 (389)
T ss_dssp HHHHHHHHHHT---EEE-HHHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHHHHH--H
T ss_pred eeeeeechhhcCCCCccccccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHHHHHHHHH--H
Confidence 9999999999999999777777777778899999999999887777644 899999999999877654 3444443 3
Q ss_pred HHHHhhccCcc
Q psy18113 402 IMAVLWKTNKR 412 (542)
Q Consensus 402 ~~~~l~~~~~~ 412 (542)
.++.+.+.+.+
T Consensus 355 gi~~i~~~~~~ 365 (389)
T PF00860_consen 355 GIRNIDWVDLD 365 (389)
T ss_dssp HHHHHHHTTS-
T ss_pred HhHhheecccC
Confidence 33444334333
No 14
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=99.82 E-value=3.7e-17 Score=172.06 Aligned_cols=326 Identities=14% Similarity=0.128 Sum_probs=225.9
Q ss_pred HHHHHHHHHHHHHHHhCCCc-------chhhHHhHHHHHHHhhhcCCCccccchhHHH-HHHHHHhh--hcCC--HHHHH
Q psy18113 37 VGLTLIPQAIAYASLAGLNP-------KYGLYSSIFGGVMYIFLGTTKQLSVGPTSIM-ALLCLTYT--HDTS--LEMVA 104 (542)
Q Consensus 37 ~~~~~iP~~~aya~lag~pp-------~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~-~~~~~~~~--~~~~--~~~~~ 104 (542)
.+.+.+|.-++= ..|+++ ++.+..+.+++++=.++|++.+...||+... ..+..... ..++ .+...
T Consensus 23 ~~~i~vPliva~--a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~~~~~~i~~~~~~~g~~~~~~~ 100 (433)
T PRK11412 23 CNTVVVPPTLLS--AFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIA 100 (433)
T ss_pred HHHHHHHHHHHH--HcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHHHHHHHHHhcccccCccHHHHH
Confidence 445666655553 367777 4568888899999999999999999997654 22222221 1223 33333
Q ss_pred H----HHHHHHHHHHHHHhhh-hchhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcc-cCCCcHHHHHHHHHhccCCCc
Q psy18113 105 F----LTFLTGLVQLTCGLLS-LGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQ-FKPKNFLDMYVQLFKNIGKTK 178 (542)
Q Consensus 105 ~----~~~l~Gii~~llg~~r-lg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~-~~~~~~~~~~~~~~~~l~~~~ 178 (542)
. ..+++|++++++|..+ ++++.|++|+-|.+-++.-+|+.++...++.+.|.+ ...+++ ++.+
T Consensus 101 g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~~~~~-----------~~~~ 169 (433)
T PRK11412 101 TSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGIADPN-----------GKIQ 169 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccCcccc-----------cccc
Confidence 3 4799999999999998 699999999999999999999999999999998862 111111 1122
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHHH-HHhcCCCccCeeEeccc
Q psy18113 179 YSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIITY-VLKNTHEKVPFALVGNI 257 (542)
Q Consensus 179 ~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~~-~~~~~~~~~~~~~~g~i 257 (542)
+..+.+++.++++++...++.|... +.+. .++.++++++++. .++. +. ..+....|
T Consensus 170 ~~~~~~a~~~l~~il~~~~~~~g~~-------------~~~s-------vLiGiv~G~v~a~~~~g~-d~-~~v~~a~w- 226 (433)
T PRK11412 170 LPPFGLSVAVMCLVLAMIIFLPQRI-------------ARYS-------LLVGTIVGWILWAFCFPS-SH-SLSGELHW- 226 (433)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHH-------------HHHH-------HHHHHHHHHHHHHHHhCC-Cc-chhccCCc-
Confidence 3445567777776666666554321 1111 3456666776643 3332 11 12222222
Q ss_pred CCCCCCCCCCC-CccccCCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc--CCC----ccCCChhHHHHhhhhhH
Q psy18113 258 ESGFPSLAFPP-THININGTDLGLLDMVSHLNTGIFLVPLVGLVANVAIAKAFS--EGK----IVDASQEMIALGMGNLA 330 (542)
Q Consensus 258 p~~~p~~~~P~-~~~~~~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a--~~~----~~d~n~EL~a~G~aNiv 330 (542)
..+| +..|. | ||..+.. ++.++++...|+++.-++.+ .++ +.+.+|-+.++|++|++
T Consensus 227 -~~~p-fG~P~~F---------~~~~il~-----~~~~~lv~~~e~iG~~~a~~~~~~~~~~~~~~l~rgi~~dGi~s~l 290 (433)
T PRK11412 227 -QWFP-LGSGGAL---------EPGIILT-----AVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLI 290 (433)
T ss_pred -eeec-CCCCCcc---------CHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccccchhhccHHHHH
Confidence 1222 45553 5 5665443 35677788889887666655 122 44778999999999999
Q ss_pred hhhhCCCCCccchhhhHHhhhcCcCchhHHHHHHHHHHHHHHH--hhHHHhhhhHHHHHHHHHHHHhhhccHHHHHHhhc
Q psy18113 331 GSFINAMPVASSFSRSAVNNASGVQTTLGGLYTSIIVLLSLSL--LTPYLQYIPQASLAAVLVCAVLTLVEIEIMAVLWK 408 (542)
Q Consensus 331 s~~fG~~p~~~s~srS~~~~~~GarT~la~i~~a~~~ll~ll~--~~~ll~~iP~~vLa~ili~~~~~li~~~~~~~l~~ 408 (542)
+|+||++|.+....+..+-..+|.+||.....++++++++-++ ++.++..||.++++|+.++ .+.++--..++.+.|
T Consensus 291 aglfg~~p~tt~sqNvGvi~~TgV~SR~v~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~-~Fg~I~~~Gi~~l~~ 369 (433)
T PRK11412 291 TVPLAVIPFSPFVSSIGLLTQTGDYRRRSFIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLV-SYLPLLGSALVFSQQ 369 (433)
T ss_pred HHhcCCCCCCchhhhhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998888766 7779999999999996655 777776666677766
Q ss_pred cCccchH
Q psy18113 409 TNKRNFL 415 (542)
Q Consensus 409 ~~~~d~~ 415 (542)
.+.++.-
T Consensus 370 ~~~~~rn 376 (433)
T PRK11412 370 ITFTARN 376 (433)
T ss_pred CCCCccc
Confidence 6644443
No 15
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=99.64 E-value=5.8e-13 Score=137.32 Aligned_cols=363 Identities=15% Similarity=0.161 Sum_probs=213.8
Q ss_pred Cccchhhhhhhcc-cccccCCCCChhhhhHhHHHHHHHHHHHH--HHHHHH--HHHhCCCcc---hhh----HHhHHHHH
Q psy18113 1 MKTKLTELLHRKV-PILAWLPKYNVNAAVSDVLAGITVGLTLI--PQAIAY--ASLAGLNPK---YGL----YSSIFGGV 68 (542)
Q Consensus 1 ~~~~~~~~~~~~~-p~~~wl~~y~~~~l~~Di~aGi~~~~~~i--P~~~ay--a~lag~pp~---~gl----~~~~~~~i 68 (542)
|.||+|...++.. ..++ .=.+.+.||++..++.. |.++=+ +.-.|+++. +.+ .++.+.++
T Consensus 1 ~~~~~~~~~~~~~~r~~~--------~~~s~~~aG~va~lvg~~~~~~iv~~a~~~~g~s~aq~~swl~a~~~~~Gl~ti 72 (395)
T TIGR00843 1 MLRCLKAIKHDVSLRLAS--------IPPPTLIAGFLAVLIGYAGPAAIFFQAAIKAGASTAMIIGWITAIGIAAAVSGI 72 (395)
T ss_pred CchhHHhhccccceeccc--------CchHHHHHHHHHHHHhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5677776654432 1111 12256778888877543 222222 233577762 222 34444445
Q ss_pred HHhhhcCCCccccchhHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHhhh-hchhhhhcchhHHHHHHHHHHHHHHH
Q psy18113 69 MYIFLGTTKQLSVGPTSIMALLCLTYTHDTSLEMVAFLTFLTGLVQLTCGLLS-LGFVVEFVSLPVVSGFTSSTAIIMAS 147 (542)
Q Consensus 69 i~~lfgss~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~l~Gii~~llg~~r-lg~l~~~ip~~V~~Gf~~gigl~i~~ 147 (542)
..++.- +-+++.+++.--+.+.....++.+++.+....+++|++.+++|+.+ ++|+.+++|+++..|+++|+.+....
T Consensus 73 ~lS~~~-r~Pi~~awStPGaAll~~~~~~~~~~eavGAfiv~g~lilllGltG~f~rl~~~IP~~Va~amLAGIlL~f~l 151 (395)
T TIGR00843 73 FLSIRF-KTPVLTAWSAPGAALLVTGFPGISLNEAIAAFITAAALIFLCGITGLFAKLLKIIPHGIAAAMLAGILFQFGL 151 (395)
T ss_pred HHHHHH-cCCeeeecCchHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 555544 3455667764444444445556788899999999999999999999 49999999999999999999887754
Q ss_pred HhhhhhhCcccCCCcHHHHHHHHHhccCCCchhhHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhccc
Q psy18113 148 SQLKYFLGIQFKPKNFLDMYVQLFKNIGKTKYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGR 227 (542)
Q Consensus 148 ~ql~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (542)
.-++.+.. ...+++..++..+..||+.+++.
T Consensus 152 ~~~~a~~~-------------------------~pll~~~mll~~l~~~r~~Pr~a------------------------ 182 (395)
T TIGR00843 152 GAFAALDG-------------------------LFLICFSMLLCWLASKAFAPRYA------------------------ 182 (395)
T ss_pred HHHHHHHH-------------------------hHHHHHHHHHHHHHHHHhcchHH------------------------
Confidence 43222210 11233444444445555543221
Q ss_pred chhHHHHHHHHHHHHhcCCCccCeeEecccCCCCCCCCCCCCccccCCCcCcHHHHHHhhhhHHHHHHHH-HHHHHHHHH
Q psy18113 228 NAFILMGCAIITYVLKNTHEKVPFALVGNIESGFPSLAFPPTHININGTDLGLLDMVSHLNTGIFLVPLV-GLVANVAIA 306 (542)
Q Consensus 228 ~~i~vi~~~~i~~~~~~~~~~~~~~~~g~ip~~~p~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~ia~v-~~~es~~~~ 306 (542)
.++++++++++++..+..+. .++ +. .-..|.+..|+| +|...+....|- +.+++. ..++.+.+.
T Consensus 183 vl~aLlvG~iva~~~G~~~~-~~~---~~-~l~~p~~~~P~f---------s~~a~~~l~lPl-~~vtm~~qnlpgiavl 247 (395)
T TIGR00843 183 MIAALICGIAFSFALGDMNP-TDL---DF-KIALPQFIAPDF---------SFAHSLNLALPL-FLVSLAGQFAPGIAAL 247 (395)
T ss_pred HHHHHHHHHHHHHHhcCCCc-ccc---cc-ccccceeeCCCC---------CHHHHHHHHHHH-HHHHHHhcCchHHHHH
Confidence 34566778778777654221 111 11 112355667877 466665543332 222221 112223333
Q ss_pred HHhcCCCccCCChhHHHHhhhhhHhhhhCCCCCccchhhhH-----HhhhcCcCchhHHHHHHHHHHHHHHH---hhHHH
Q psy18113 307 KAFSEGKIVDASQEMIALGMGNLAGSFINAMPVASSFSRSA-----VNNASGVQTTLGGLYTSIIVLLSLSL---LTPYL 378 (542)
Q Consensus 307 ~~~a~~~~~d~n~EL~a~G~aNivs~~fG~~p~~~s~srS~-----~~~~~GarT~la~i~~a~~~ll~ll~---~~~ll 378 (542)
++ .||+.+.|+-+...|++|++++.||+++.+-+---++ -..+-++|+-.+++.+|++.+++.++ +..++
T Consensus 248 ~a--aGy~~p~~~~~~~tGl~sll~ApfGg~~~nlaaitaAic~G~~ah~d~~rR~~a~i~~Gv~yll~glfag~i~~l~ 325 (395)
T TIGR00843 248 KA--AGYNAPAKPIIAAAGLAALFAAFAGGISIGIAAITAAICMGKDAHEDKDKRWIAAAAAGIFYLLAGLFAGAITALF 325 (395)
T ss_pred HH--cCCCCCchHHHHHHHHHHHHHhccCCchhhhhHHhHHHhcCcccccCcCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 6788888999999999999999999999222211111 22334789999999999999998877 45578
Q ss_pred hhhhHHHHHHHHHHHHhhhccHHHHHHhhccCccchHHHHHHHHHHH----HHh---hHHHHHHHHHHH
Q psy18113 379 QYIPQASLAAVLVCAVLTLVEIEIMAVLWKTNKRNFLTLVVTFAACL----LIG---IEIGLLCGICLD 440 (542)
Q Consensus 379 ~~iP~~vLa~ili~~~~~li~~~~~~~l~~~~~~d~~v~~~t~~~~l----~~~---~~~Gi~~Gi~~s 440 (542)
..+|+...+++-=.+.++-+.- .+..-.+. .++..-.++||++|. ++| -..|+++|+...
T Consensus 326 ~~~P~~li~~laGlAll~~~~~-~l~~a~~~-~~~r~~a~~tflvtaSg~~~~gigaafWgl~~G~~~~ 392 (395)
T TIGR00843 326 AALPKELIAALAGLALLGAIAG-NIKIALHE-DQERDAALIAFLATASGLHFLGIGSAFWGLCAGGLAY 392 (395)
T ss_pred HHCCHHHHHHHHHHHHHHHHHH-HHHHHhcC-cchhHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHH
Confidence 9999998888544444433322 22333332 223444556666654 232 344677775543
No 16
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=99.49 E-value=1.3e-10 Score=130.21 Aligned_cols=347 Identities=16% Similarity=0.195 Sum_probs=230.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhC------CCcchhhHHhHHHHHHHhhhcCCCccccchhHHHHHHHH---HhhhcCCHH--
Q psy18113 33 AGITVGLTLIPQAIAYASLAG------LNPKYGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLCL---TYTHDTSLE-- 101 (542)
Q Consensus 33 aGi~~~~~~iP~~~aya~lag------~pp~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~---~~~~~~~~~-- 101 (542)
|=+-..+..+.-++||+.+.+ +...=-|.++.+++++|++||+.|..++|+++.+.++.. ..+.+.+.+
T Consensus 374 a~ifiyFA~L~PaIaFG~ll~~~T~g~~gv~E~Llstai~Giifslf~GQPL~IlG~TGPilvF~~~ly~~c~~~~~~yl 453 (900)
T TIGR00834 374 AVIFIYFAALSPAITFGGLLGEKTRNMMGVSELLISTAVQGVLFALLAAQPLLVVGFSGPLLVFEEAFFSFCESNGLEYL 453 (900)
T ss_pred HHHHHHHHHhhHHhhHHHHHHHhhCCcchHHHHHHHHHHHHHHHhhhcCCceEEecCcccHHHHHHHHHHHHhhcCCchH
Confidence 334455666777888887632 344446999999999999999999999877766655544 445555544
Q ss_pred -HHHHHHHHHHHHHHHHHhhhhchhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccCCC--cHHHHHHHH--------
Q psy18113 102 -MVAFLTFLTGLVQLTCGLLSLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFKPK--NFLDMYVQL-------- 170 (542)
Q Consensus 102 -~~~~~~~l~Gii~~llg~~rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~~--~~~~~~~~~-------- 170 (542)
....+.+.++++.++++.+...++++|+.+.--..|-.=|+++.+...++.+...-..+. ..++.-.+.
T Consensus 454 ~~~~WigiW~~~~~~lla~~~~s~lvryiTRFTeEiFa~lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~~~~~~ 533 (900)
T TIGR00834 454 VGRVWIGLWLVLLVLLLVATEGSFLVRYISRFTQEIFSFLISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPKPQGPS 533 (900)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccc
Confidence 466778999999999999999999999999999999999999999888877654211100 000000000
Q ss_pred --------------------HhccCCCchhhHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchh
Q psy18113 171 --------------------FKNIGKTKYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAF 230 (542)
Q Consensus 171 --------------------~~~l~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 230 (542)
+...+..-+.++++.+.++.+.+.++++++....|. ..++++..+- ..+
T Consensus 534 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~llsliL~lgTf~~a~~L~~fk~s~yf~~----~vR~~isDfg-------v~i 602 (900)
T TIGR00834 534 VSALLEKDCSKLGGTLGGNNCRFQPNTALLSLVLMLGTFFLAMFLRKFKNSRYFPG----KARRLIGDFG-------VPI 602 (900)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhCCCCcCCc----hhhhhhhhhh-------HHH
Confidence 001122334567777778888788888775433221 1222333332 345
Q ss_pred HHHHHHHHHHHHhcCCCccCeeEecccCCCCCCCCCCCC-ccc----cCCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHH
Q psy18113 231 ILMGCAIITYVLKNTHEKVPFALVGNIESGFPSLAFPPT-HIN----INGTDLGLLDMVSHLNTGIFLVPLVGLVANVAI 305 (542)
Q Consensus 231 ~vi~~~~i~~~~~~~~~~~~~~~~g~ip~~~p~~~~P~~-~~~----~~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~ 305 (542)
.+++.+.+.+.++.... .. -.+|++++ |..|+- .+. .....+.|+.++..++++ +.++++-|+|+-.+
T Consensus 603 aI~~~t~v~~~~~~v~~-~k----l~Vp~~f~-pt~p~~R~W~i~p~~~~~~~p~w~~~~A~iPA-lll~ILiFmD~nIt 675 (900)
T TIGR00834 603 SILIMVLVDIFIGDTYT-QK----LSVPSGLK-VTNPSARGWFIPPLGENRPFPWWMMFAAALPA-LLVFILIFMEQQIT 675 (900)
T ss_pred HHHHHHHHHHHhccCcc-cc----cCCCCCcC-CCCCCCCCeEEccccccccccHHHHHHHHHHH-HHHHHHHHHHhhhH
Confidence 66777777776541111 11 13555543 233320 000 111223566667777776 67889999999766
Q ss_pred HHHhcC-----CCccCCChhHHHHhhhhhHhhhhCCCCCccchhhhHHhhhc-----------------Cc-CchhHHHH
Q psy18113 306 AKAFSE-----GKIVDASQEMIALGMGNLAGSFINAMPVASSFSRSAVNNAS-----------------GV-QTTLGGLY 362 (542)
Q Consensus 306 ~~~~a~-----~~~~d~n~EL~a~G~aNivs~~fG~~p~~~s~srS~~~~~~-----------------Ga-rT~la~i~ 362 (542)
+....+ ++..-.+-+|+-.|+.|.++|++|--+.+|+..||....++ +. -+|+++++
T Consensus 676 s~iv~~~e~kLkKgsgyH~Dllllg~~~~v~sllGLPw~~aatv~S~~Hv~sL~v~~~~~~~Ge~~~i~~V~EQRvT~ll 755 (900)
T TIGR00834 676 TLIVSKKERKLKKGSGFHLDLLLVVGMGGVAALFGLPWLSAATVRSVTHANALTVMSKASAPGEKAQIQEVREQRVTGLL 755 (900)
T ss_pred HHHhcCccccCCCCcccchHHHHHHHHHHHHHhcCCCcccccCCcChhhHhHHeeeeeccCCCCCCccceeEeeehHHHH
Confidence 665552 12334678999999999999999999889888777655442 12 36899999
Q ss_pred HHHHHHHHHHHhhHHHhhhhHHHHHHHHHHHHhhhc
Q psy18113 363 TSIIVLLSLSLLTPYLQYIPQASLAAVLVCAVLTLV 398 (542)
Q Consensus 363 ~a~~~ll~ll~~~~ll~~iP~~vLa~ili~~~~~li 398 (542)
.++++.+.+ +..|++.+||++||.|+.++.|+.-+
T Consensus 756 ~~lLiglsv-~~~PvL~~IP~aVL~GvFlYMGv~SL 790 (900)
T TIGR00834 756 VAVLVGLSI-LMEPILKRIPLAVLFGIFLYMGVTSL 790 (900)
T ss_pred HHHHHHHHH-HHHHHHhhccHHHHHHHHHHHHHhhc
Confidence 998776655 68899999999999999999998665
No 17
>KOG1172|consensus
Probab=99.43 E-value=4.8e-10 Score=122.75 Aligned_cols=337 Identities=17% Similarity=0.215 Sum_probs=224.7
Q ss_pred HHHHHHHHHhC------CCcchhhHHhHHHHHHHhhhcCCCccccchhHHHHHH---HHHhhhcCCHHH---HHHHHHHH
Q psy18113 43 PQAIAYASLAG------LNPKYGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALL---CLTYTHDTSLEM---VAFLTFLT 110 (542)
Q Consensus 43 P~~~aya~lag------~pp~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~---~~~~~~~~~~~~---~~~~~~l~ 110 (542)
--+++|+.+-| +...=.|.++.+++++|++||+-|..++|+++-+.++ +.....+.+.++ ...+.+.+
T Consensus 375 ~P~ItFG~ll~~~Tdg~~~v~E~L~stal~GiifslfggQPLlIlg~TgP~lVfe~~lf~f~~~~~~dyl~~r~wVglW~ 454 (876)
T KOG1172|consen 375 LPAITFGGLLGEATDGLIGVVETLLSTALCGIIFSLFGGQPLLILGVTGPLLVFEKALFKFCKDNGLDYLAFRAWVGLWT 454 (876)
T ss_pred hhHhhHHHHhhhhccchHHHHHHHHHHHHHHHHHHHhcCCceEEEecCccHHHHHHHHHHHHhhCCCchhhHHHHHHHHH
Confidence 34677775533 2233458999999999999999999998776665554 444455666554 56678999
Q ss_pred HHHHHHHHhhhhchhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccCCC-cHH--H--HH---HHHHhcc--------
Q psy18113 111 GLVQLTCGLLSLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFKPK-NFL--D--MY---VQLFKNI-------- 174 (542)
Q Consensus 111 Gii~~llg~~rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~~-~~~--~--~~---~~~~~~l-------- 174 (542)
.++.+++..+....+++|+.+.-=..|-.=|+++.+.-.++.+.++..... ++. . .. ..-..+.
T Consensus 455 ~~l~illaa~~as~lv~~~TRfteEiF~~LIs~iFi~eai~kl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (876)
T KOG1172|consen 455 AFLLILLAATNASSLVKYITRFTEEIFGLLISLIFIYEAIKKLIKIFKGLPIEFDSKPNPGADWSGPECESVSGTLLGSS 534 (876)
T ss_pred HHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCcccccccccccccCcccCCCc
Confidence 999999999999999999999999999999999999999986665442210 000 0 00 0000000
Q ss_pred --CCCchhhHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhh-hhhhhHHHhhcccchhHHHHHHHHHHHHhcCCCccCe
Q psy18113 175 --GKTKYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIK-YLKSFLWFISTGRNAFILMGCAIITYVLKNTHEKVPF 251 (542)
Q Consensus 175 --~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~~~~~~~~ 251 (542)
++....++++.+.++.+-+.+|++++-...| ++.| ++..+- ..+.+++.+.+.++.+.... .++
T Consensus 535 ~~p~~~llslil~~gt~~~a~~lr~fr~s~yf~-----~~~R~~isDfg-------vpisIl~~s~i~~~~~~~~~-~kl 601 (876)
T KOG1172|consen 535 CRPDTALLSLILMFGTLFLALTLRKFKSSRYFP-----RKVRSLISDFG-------VPLSILVFSLIDYFGGSVET-PKL 601 (876)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhccCCccc-----hHHHHHHHhhh-------hHHHHHHHHHHHhhccccCC-Ccc
Confidence 2233445666666666667777776543322 2222 333321 23456667777766542111 222
Q ss_pred eEecccCCCCCCCCCCCCcccc-CCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCC-----CccCCChhHHHHh
Q psy18113 252 ALVGNIESGFPSLAFPPTHINI-NGTDLGLLDMVSHLNTGIFLVPLVGLVANVAIAKAFSEG-----KIVDASQEMIALG 325 (542)
Q Consensus 252 ~~~g~ip~~~p~~~~P~~~~~~-~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a~~-----~~~d~n~EL~a~G 325 (542)
..|..+|++.-++=.+.. ......|+.++..++++ +.++++-|+|+-.++....++ +..-..=+|+-.|
T Consensus 602 ----~vp~~~~~t~~~~rgw~v~~~~~~P~~~~~~A~ipa-lll~iLiFmDqqIts~iv~rke~kLKKgsgyH~DLlllg 676 (876)
T KOG1172|consen 602 ----PVPSVFPPTWPFDRGWFVPPFGKNPWWYVFAALIPA-LLLTILIFMDQQITAVIVNRKENKLKKGSGYHLDLLLLG 676 (876)
T ss_pred ----ccCcCCCCCCcccCCeeeCCCCCCCHHHHHHHHHHH-HHHHHHHHhcchHHHHHhhcccccCCCCcchhHHHHHHH
Confidence 234344322111101100 01134688888888877 678999999998766665521 2344567899999
Q ss_pred hhhhHhhhhCCCCCccchhhhHHhhhc-----------------CcC-chhHHHHHHHHHHHHHHHhhHHHhhhhHHHHH
Q psy18113 326 MGNLAGSFINAMPVASSFSRSAVNNAS-----------------GVQ-TTLGGLYTSIIVLLSLSLLTPYLQYIPQASLA 387 (542)
Q Consensus 326 ~aNivs~~fG~~p~~~s~srS~~~~~~-----------------Gar-T~la~i~~a~~~ll~ll~~~~ll~~iP~~vLa 387 (542)
+.|.++|+||=-+.+|+..+|-.-.++ |.| +|++|++.++++.+. .+..|++..||++||.
T Consensus 677 il~~icsllGLPw~~~a~p~S~~H~~SL~v~~~~~apge~~~i~~V~EQRvtgll~~llvgls-~~~~pvL~~IP~~VL~ 755 (876)
T KOG1172|consen 677 ILTLICSLLGLPWSNAATVQSPMHTKSLAVESETSAPGEQPQIVGVREQRVTGLLQFLLVGLS-VLLLPVLKLIPMPVLY 755 (876)
T ss_pred HHHHHHHhcCCCccccccccCHHHHHHHHHhhcccCCCCccccccchhhhhHHHHHHHHHHHH-HHHHHHHhhccHHHHH
Confidence 999999999999999999988766553 232 579999999988844 4789999999999999
Q ss_pred HHHHHHHhhhc
Q psy18113 388 AVLVCAVLTLV 398 (542)
Q Consensus 388 ~ili~~~~~li 398 (542)
|+-.+.|+.-+
T Consensus 756 GvFlYMgv~SL 766 (876)
T KOG1172|consen 756 GVFLYMGVSSL 766 (876)
T ss_pred HHHHHHhhccC
Confidence 99999988765
No 18
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=99.38 E-value=1.1e-09 Score=111.14 Aligned_cols=342 Identities=18% Similarity=0.188 Sum_probs=204.2
Q ss_pred HhHHHHHHHHHHHH--HHHHHH--HHHhCCCcch---hhHHh----HHHHHHHhhhcCCCccccchhHHHHHHHHHhhhc
Q psy18113 29 SDVLAGITVGLTLI--PQAIAY--ASLAGLNPKY---GLYSS----IFGGVMYIFLGTTKQLSVGPTSIMALLCLTYTHD 97 (542)
Q Consensus 29 ~Di~aGi~~~~~~i--P~~~ay--a~lag~pp~~---gl~~~----~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~~~~~ 97 (542)
+.+.+|++..++.. |.++-+ +.-+|..+.. .+.+. .+.++..++.-+-|....=.+...+++. +...+
T Consensus 6 s~~~aG~va~lvg~tg~~aiv~qaa~a~g~s~~q~~SWl~al~~~~Gl~~i~lSl~yR~Pi~~AWStPGaAlL~-~~~~~ 84 (378)
T PF03594_consen 6 SAVSAGFVAVLVGYTGPVAIVLQAAQAAGASPAQIASWLFALYLGMGLTSILLSLRYRMPIVTAWSTPGAALLA-TSLPG 84 (378)
T ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcchHHHHHHH-HhccC
Confidence 45677777776543 222222 3346777732 33333 2334444444343332211123344444 44557
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhhh-chhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccCCCcHHHHHHHHHhccCC
Q psy18113 98 TSLEMVAFLTFLTGLVQLTCGLLSL-GFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFKPKNFLDMYVQLFKNIGK 176 (542)
Q Consensus 98 ~~~~~~~~~~~l~Gii~~llg~~rl-g~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~~~~~l~~ 176 (542)
++++.+...-+++|++.++.|+.++ +|+++++|.++..++++|+-+-....-++.+-
T Consensus 85 ~~~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLAGvLl~f~l~~f~a~~---------------------- 142 (378)
T PF03594_consen 85 YSFAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLAGVLLPFGLAAFTALQ---------------------- 142 (378)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH----------------------
Confidence 8888899999999999999999995 99999999999999999998877654333211
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHHHHHhcCCCccCeeEecc
Q psy18113 177 TKYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIITYVLKNTHEKVPFALVGN 256 (542)
Q Consensus 177 ~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~~~~~~~~~~~g~ 256 (542)
....+....++..++.||+.+|+. ....++.+..+++..+..+ ...++.
T Consensus 143 ---~~P~l~~~ml~~~l~~~r~~pr~a------------------------v~~al~~g~~~a~~~g~~~----~~~~~~ 191 (378)
T PF03594_consen 143 ---ADPLLVGPMLAVFLLARRFSPRYA------------------------VLAALVAGVAVAALTGQLH----PSALQL 191 (378)
T ss_pred ---hHHHHHHHHHHHHHHHHHHcchhH------------------------HHHHHHHHHHHHHhcCCCC----cccccc
Confidence 012234445556666777765442 2234455555555443221 111111
Q ss_pred cCCCCCCCCCCCCccccCCCcCcHHHHHHhhhhHHHHHHHHHHH-HHH-HHHHHhcCCCccCCChhHHHHhhhhhHhhhh
Q psy18113 257 IESGFPSLAFPPTHININGTDLGLLDMVSHLNTGIFLVPLVGLV-ANV-AIAKAFSEGKIVDASQEMIALGMGNLAGSFI 334 (542)
Q Consensus 257 ip~~~p~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~ia~v~~~-es~-~~~~~~a~~~~~d~n~EL~a~G~aNivs~~f 334 (542)
.-..|.+..|+| +|..++..- +-+.++.+. |++ +.+-.-++||+.+.|+-+...|++|++.+.|
T Consensus 192 -~~~~p~~~~P~F---------s~~a~v~la----lPL~ivtmasQnlpG~aVL~a~GY~~p~~~~~~~tGl~s~l~Apf 257 (378)
T PF03594_consen 192 -SLAHPVFTTPEF---------SWSALVSLA----LPLFIVTMASQNLPGIAVLRAAGYQPPVNPLITVTGLASLLAAPF 257 (378)
T ss_pred -ccceeEEECCcc---------cHHHHHHHH----HHHHHHHHHhcchHHHHHHHHcCCCCCchHHHHHHHHHHHHHhhh
Confidence 112466778888 566665532 223333322 221 1111112789999999999999999999999
Q ss_pred CCCCCccchhhhHHhhh--cC---cCchhHHHHHHHHHHHHHHH---hhHHHhhhhHHHHHHHHHHHHhhhccHHHHHHh
Q psy18113 335 NAMPVASSFSRSAVNNA--SG---VQTTLGGLYTSIIVLLSLSL---LTPYLQYIPQASLAAVLVCAVLTLVEIEIMAVL 406 (542)
Q Consensus 335 G~~p~~~s~srS~~~~~--~G---arT~la~i~~a~~~ll~ll~---~~~ll~~iP~~vLa~ili~~~~~li~~~~~~~l 406 (542)
||.+.+-+---.++... ++ .|--.+++.+|++.+++.++ ...++.-.|++..+.+-=.+.++-+. ..++.-
T Consensus 258 Gg~~~nlAaitaAIc~g~eah~dp~rRy~Aav~~Gv~yll~Gl~a~~~v~l~~~lP~~li~~lAGLALlg~l~-~sl~~A 336 (378)
T PF03594_consen 258 GGHAVNLAAITAAICAGPEAHPDPSRRYIAAVAAGVFYLLFGLFAAALVALFAALPPALIAALAGLALLGTLG-GSLQTA 336 (378)
T ss_pred chhhhHHHHHHHHHHcCCccCCCcccchHHHHHHhHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 99998876666666654 33 34448999999999998877 44578899999887743333333332 233444
Q ss_pred hccCccchHHHHHHHHHHH----HH---hhHHHHHHHHHHH
Q psy18113 407 WKTNKRNFLTLVVTFAACL----LI---GIEIGLLCGICLD 440 (542)
Q Consensus 407 ~~~~~~d~~v~~~t~~~~l----~~---~~~~Gi~~Gi~~s 440 (542)
++.++ +..-.++||++|. ++ .-..|+++|++..
T Consensus 337 ~~~~~-~r~aAlvtFlvtaSGisl~gIgaafWgLv~G~~~~ 376 (378)
T PF03594_consen 337 FSDEK-YREAALVTFLVTASGISLLGIGAAFWGLVAGLLVH 376 (378)
T ss_pred hcCcc-hhHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHH
Confidence 44332 2334455666554 22 2344777777654
No 19
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=98.91 E-value=2.2e-09 Score=93.30 Aligned_cols=74 Identities=18% Similarity=0.213 Sum_probs=60.1
Q ss_pred ceEEEEEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhhcCC
Q psy18113 464 FEFWLFEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNNFYV 542 (542)
Q Consensus 464 ~~i~i~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~~~ 542 (542)
+++.++|++|+|+|+|++++++++.+.+.+..++.. .+. +.+++|+||++|+++|+||+++|.++.++++++|+
T Consensus 8 ~~v~ii~~~g~l~f~~~~~~~~~i~~~~~~~~~~~~--~~~---~~~~vIlD~s~v~~iDssgi~~L~~~~~~~~~~g~ 81 (117)
T PF01740_consen 8 DGVLIIRLDGPLFFANAEEFRDRIRKLIDEDPERIK--KRQ---TIKNVILDMSGVSFIDSSGIQALVDIIKELRRRGV 81 (117)
T ss_dssp TTEEEEEEESEESHHHHHHHHHHHHHHHCCSSS--H--TSS---SSSEEEEEETTESEESHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEEeeEEEHHHHHHHHHHHHHhhhccccccc--ccc---cceEEEEEEEeCCcCCHHHHHHHHHHHHHHHHCCC
Confidence 468999999999999999999999995543322111 011 24579999999999999999999999999999885
No 20
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.90 E-value=8.4e-07 Score=88.53 Aligned_cols=291 Identities=18% Similarity=0.166 Sum_probs=175.2
Q ss_pred HhHHHHHHHHHHHHH--HH--HHHHHHhCCCcch---hh----HHhHHHHHHHhhhcCCCccccchhHHHHHHHHHhhhc
Q psy18113 29 SDVLAGITVGLTLIP--QA--IAYASLAGLNPKY---GL----YSSIFGGVMYIFLGTTKQLSVGPTSIMALLCLTYTHD 97 (542)
Q Consensus 29 ~Di~aGi~~~~~~iP--~~--~aya~lag~pp~~---gl----~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~~~~~ 97 (542)
+.+.+|.+..++--- .+ +.-+..+|..|.. .+ ....+.++-+.++-+.|....=.+-..+++..+. .+
T Consensus 21 ~~l~ag~va~~vG~~~s~aii~~aa~a~gas~aq~aSwl~al~l~mGv~ti~Ls~~yR~Pv~~aWSTPG~all~asl-~g 99 (402)
T COG3135 21 QTLLAGFVAVLVGYASSLAIIIQAAQAAGASPAQIASWLTALGLAMGVSTLTLSLRYRVPVLTAWSTPGAALLVASL-GG 99 (402)
T ss_pred hhhhhhhHHheeccCccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccceeeeecCccHHHHHhcc-CC
Confidence 456777776653221 11 1123346777632 12 2333445555666666665533344455555443 56
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhh-hchhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccCCCcHHHHHHHHHhccCC
Q psy18113 98 TSLEMVAFLTFLTGLVQLTCGLLS-LGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFKPKNFLDMYVQLFKNIGK 176 (542)
Q Consensus 98 ~~~~~~~~~~~l~Gii~~llg~~r-lg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~~~~~l~~ 176 (542)
.+...+..+-+++|.+..+.|++| ++|+++-+|.++-.++++|+=+-.....++..-
T Consensus 100 ~s~~eaVGAfiVt~~li~l~G~~~~l~rl~~~IP~sla~AmlAGILL~F~l~a~~a~~---------------------- 157 (402)
T COG3135 100 LSFAEAVGAFIVTGALIILCGLTGPLTRLMRIIPPSLAAAMLAGILLRFGLKAFKALP---------------------- 157 (402)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhccC----------------------
Confidence 777789999999999999999999 699999999999999999998776654433211
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHHHHHhcCCCccCeeEecc
Q psy18113 177 TKYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIITYVLKNTHEKVPFALVGN 256 (542)
Q Consensus 177 ~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~~~~~~~~~~~g~ 256 (542)
.+ ..+.+-.++..++.|.+.+++. ...+.+++..++...+.... ......
T Consensus 158 ~~---p~l~lpmv~~~ll~r~f~pr~a------------------------V~aalvvgv~va~~~G~~~~---~~~~~~ 207 (402)
T COG3135 158 TQ---PLLVLPMVLAYLLARVFAPRYA------------------------VIAALVVGVLVAALLGDLHT---ALVALE 207 (402)
T ss_pred CC---hHHHHHHHHHHHHHHHcCchHH------------------------HHHHHHHHHHHHHHhCcccc---cccccc
Confidence 01 1122333344445566654431 22345556555555442211 001111
Q ss_pred cCCCCCCCCCCCCccccCCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc----CCCccCCChhHHHHhhhhhHhh
Q psy18113 257 IESGFPSLAFPPTHININGTDLGLLDMVSHLNTGIFLVPLVGLVANVAIAKAFS----EGKIVDASQEMIALGMGNLAGS 332 (542)
Q Consensus 257 ip~~~p~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a----~~~~~d~n~EL~a~G~aNivs~ 332 (542)
...|.+..|+| +|..++... +-+.++.+..- +...++ +||+.+++--+.+.|+..+.++
T Consensus 208 --~~~p~~v~P~F---------s~~A~l~la----lPL~lvtmasQ--N~pGiAvLka~gY~pp~~pl~~~TGl~sll~A 270 (402)
T COG3135 208 --ISTPTWVTPEF---------SFAAMLSLA----LPLFLVTMASQ--NLPGIAVLKAAGYQPPPSPLIVATGLASLLSA 270 (402)
T ss_pred --cCcceeeCCcc---------cHHHHHHHh----HHHHHHHHHhc--cCccceeehhcCCCCCCchHHHHhHHHHHHhc
Confidence 13467778888 456665432 22333322211 112222 6899999999999999999999
Q ss_pred hhCCCCCccchhhhHHhhhc-----CcCchhHHHHHHHHHHHHHHHhhH---HHhhhhHHHHHHH
Q psy18113 333 FINAMPVASSFSRSAVNNAS-----GVQTTLGGLYTSIIVLLSLSLLTP---YLQYIPQASLAAV 389 (542)
Q Consensus 333 ~fG~~p~~~s~srS~~~~~~-----GarT~la~i~~a~~~ll~ll~~~~---ll~~iP~~vLa~i 389 (542)
.||+..++-.----++...- -.|.-.++.++++.-+++.+|.+. ++.-+|+..++.+
T Consensus 271 pfG~~t~nLaAItAAic~gpdaHpD~~rry~Aa~~agi~ylv~GlF~~~~~~l~~alP~~li~~l 335 (402)
T COG3135 271 PFGGHTVNLAAITAAICTGPDAHPDPARRYTAALVAGIFYLLAGLFGGALVGLMAALPASLIAAL 335 (402)
T ss_pred ccccceecHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHHHHHH
Confidence 99999877433322222221 135668999999999999888554 6778898876653
No 21
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.
Probab=98.84 E-value=6.8e-09 Score=87.70 Aligned_cols=66 Identities=20% Similarity=0.240 Sum_probs=56.6
Q ss_pred ceEEEEEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhhcCC
Q psy18113 464 FEFWLFEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNNFYV 542 (542)
Q Consensus 464 ~~i~i~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~~~ 542 (542)
+++.++|++|+++|+|+++|++++.+.+ .+. ..+.+|+||+.|+++|+||+.+|.++.++++++|+
T Consensus 7 ~~v~ii~~~G~l~f~~~~~~~~~l~~~~----------~~~---~~~~vilDls~v~~iDssgl~~L~~l~~~~~~~g~ 72 (100)
T cd06844 7 DDYWVVRLEGELDHHSVEQFKEELLHNI----------TNV---AGKTIVIDISALEFMDSSGTGVLLERSRLAEAVGG 72 (100)
T ss_pred CCEEEEEEEEEecHhhHHHHHHHHHHHH----------HhC---CCCEEEEECCCCcEEcHHHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999997622 111 13479999999999999999999999999999874
No 22
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=98.83 E-value=1.3e-09 Score=116.48 Aligned_cols=345 Identities=16% Similarity=0.236 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHhC------CCcchhhHHhHHHHHHHhhhcCCCccccchhHHHHHHHH---HhhhcCCHHH---
Q psy18113 35 ITVGLTLIPQAIAYASLAG------LNPKYGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLCL---TYTHDTSLEM--- 102 (542)
Q Consensus 35 i~~~~~~iP~~~aya~lag------~pp~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~---~~~~~~~~~~--- 102 (542)
+-.....+.-+++|+.+-+ +...-.+.++.+++++|++||+.|..+.|+++-+.++.. ...++.+.++
T Consensus 40 ~flyfa~l~PaItFG~ll~~~T~~~~gv~e~l~~~~i~Gi~f~lf~gQPL~Ilg~TgP~~vf~~~l~~~~~~~~~~fl~~ 119 (510)
T PF00955_consen 40 LFLYFACLSPAITFGGLLGEATDGAIGVMEVLLSTAICGIIFSLFSGQPLTILGSTGPVLVFEKILYKFCKSYGLDFLPF 119 (510)
T ss_dssp HHHHHHHHHHHHSSS-SS---------HHHHHHHHHHHHHHHHHCC----------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3344556666777776533 333445889999999999999999998887776655443 3445555554
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccCC---CcH---H------------
Q psy18113 103 VAFLTFLTGLVQLTCGLLSLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFKP---KNF---L------------ 164 (542)
Q Consensus 103 ~~~~~~l~Gii~~llg~~rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~---~~~---~------------ 164 (542)
-..+.+.++++.+++..+...++++|+.+..-..|-.=|++..+...++.+...-... .+. .
T Consensus 120 ~~wig~w~~~~~~~~~~~~~s~lv~~~TRfTeEiF~~lIs~iFi~ea~~~l~~~~~~~p~~~~~~~~~~c~c~~~~~~~~ 199 (510)
T PF00955_consen 120 RAWIGIWTAIFLLVLAAFNASFLVRYITRFTEEIFALLISIIFIYEAIKKLVKIFKKYPLNSDYVTQYSCQCTPPENSNN 199 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4567899999999999999999999999999999999999999888887765533211 000 0
Q ss_pred ------H-------HHHHH----Hh----------------ccCCCchhhHHHHHHHHHHHHHHHHhhhcccCCCCCCch
Q psy18113 165 ------D-------MYVQL----FK----------------NIGKTKYSDLSLGVACVVLLLFMKRLQDIKLTDKEPPGV 211 (542)
Q Consensus 165 ------~-------~~~~~----~~----------------~l~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~ 211 (542)
+ .+... .. .-++.-..++++.+.++.+-..++++++....+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~g~~~g~~c~~~~~~~p~taLlSliL~lgTf~la~~L~~fk~S~yf~~~---- 275 (510)
T PF00955_consen 200 STLNPWTNLNNGSINWSNLSNSECENINGELVGTSCDDHVQYQPDTALLSLILALGTFWLAYTLRQFKNSPYFPRW---- 275 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCcCccHH----
Confidence 0 00000 00 01112234556666666666667776653332211
Q ss_pred hhhhhhhhHHHhhcccchhHHHHHHHHHHHHhcCCCccCeeEecccCCCCCCCCCCC-Ccccc-CCCcCcHHHHHHhhhh
Q psy18113 212 KIKYLKSFLWFISTGRNAFILMGCAIITYVLKNTHEKVPFALVGNIESGFPSLAFPP-THINI-NGTDLGLLDMVSHLNT 289 (542)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~~~~~~~~~~~g~ip~~~p~~~~P~-~~~~~-~~~~~~~~~~~~~l~~ 289 (542)
.+++...+- ..+.+++.+.+.+.++.+. ..+ .+|.++. +..|+ =.+.. ......|+.....+.+
T Consensus 276 vR~~isDf~-------v~iaI~~~~~~~~~~~~~~--~kL----~vp~~f~-pt~~~~r~W~v~p~~~~p~w~~~aA~~p 341 (510)
T PF00955_consen 276 VREIISDFG-------VPIAILIMTLVDYLFGVDT--PKL----NVPSSFK-PTSPGKRGWFVNPFGSLPWWAIFAAIIP 341 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhHHhhH-------HHHHHHHHHHHHHHhcccc--ccc----CCCCCCC-CCCCCCCCeecCcccCCCHHHHHHHHHH
Confidence 112222221 2345556666665544211 111 2343331 11111 00000 0112244455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-----CCccCCChhHHHHhhhhhHhhhhCCCCCccchhhhHHhhhc----------C-
Q psy18113 290 GIFLVPLVGLVANVAIAKAFSE-----GKIVDASQEMIALGMGNLAGSFINAMPVASSFSRSAVNNAS----------G- 353 (542)
Q Consensus 290 ~~~~ia~v~~~es~~~~~~~a~-----~~~~d~n~EL~a~G~aNivs~~fG~~p~~~s~srS~~~~~~----------G- 353 (542)
+ +.++++-++|.-.++....+ ++..-..-+|.-.|+-|.++|++|--..+++..||....++ |
T Consensus 342 a-lll~iL~F~DqnIts~ivn~~e~kLkKg~gyH~DL~llgi~~~v~sllGLPw~~aa~~~S~~Hv~sL~~~~~~~~pGe 420 (510)
T PF00955_consen 342 A-LLLTILFFMDQNITSLIVNRPENKLKKGSGYHLDLFLLGIITLVCSLLGLPWMNAATPQSPMHVRSLAVESETSAPGE 420 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred H-HHHHHHHHHHHhHhHHHhCChhhccCCCCcccHHHHHHHHHHHHHHHcCCCCcccCccCCHHHhCcccEEeccccCCC
Confidence 5 56777888887655444331 12233457789999999999999988888888777665432 2
Q ss_pred ------c-CchhHHHHHHHHHHHHHHHhhHHHhhhhHHHHHHHHHHHHhhhcc
Q psy18113 354 ------V-QTTLGGLYTSIIVLLSLSLLTPYLQYIPQASLAAVLVCAVLTLVE 399 (542)
Q Consensus 354 ------a-rT~la~i~~a~~~ll~ll~~~~ll~~iP~~vLa~ili~~~~~li~ 399 (542)
. -+|+++++.++++.+.+ ++.|++++||++||.|+-++.|+.-++
T Consensus 421 ~~~i~~V~EqRvT~l~~~~Ligls~-~l~pvL~~IP~~VL~GvFlymG~~sL~ 472 (510)
T PF00955_consen 421 KPKIVGVREQRVTGLLVHLLIGLSL-FLLPVLKLIPMPVLYGVFLYMGVTSLS 472 (510)
T ss_dssp -----------------------------------------------------
T ss_pred CCeeCeEEEecccHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHhheeeeec
Confidence 2 36799999998776665 678999999999999999999987663
No 23
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=98.75 E-value=2.3e-08 Score=85.37 Aligned_cols=66 Identities=18% Similarity=0.105 Sum_probs=56.8
Q ss_pred ceEEEEEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhhcCC
Q psy18113 464 FEFWLFEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNNFYV 542 (542)
Q Consensus 464 ~~i~i~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~~~ 542 (542)
+++.+++++|+|+|+|++++++.+.+.+ .+. +.+.+++||+.|+++|+||+.+|.++.++++++|.
T Consensus 7 ~~~~vi~l~G~L~f~~~~~~~~~l~~~~----------~~~---~~~~vilDls~v~~iDssgi~~L~~~~~~~~~~g~ 72 (106)
T TIGR02886 7 GDVLIVRLSGELDHHTAERVRRKIDDAI----------ERR---PIKHLILNLKNVTFMDSSGLGVILGRYKKIKNEGG 72 (106)
T ss_pred CCEEEEEEecccchhhHHHHHHHHHHHH----------HhC---CCCEEEEECCCCcEecchHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999998732 111 13469999999999999999999999999999874
No 24
>KOG1292|consensus
Probab=98.73 E-value=1.8e-06 Score=89.68 Aligned_cols=297 Identities=12% Similarity=0.171 Sum_probs=172.5
Q ss_pred hhHHhHHHHHHHhhhcCCCccccchhHHHHHHHHHhhh---------c-C----CH----HHHHHHHHHHHHHHHHHHhh
Q psy18113 59 GLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLCLTYTH---------D-T----SL----EMVAFLTFLTGLVQLTCGLL 120 (542)
Q Consensus 59 gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~~~~---------~-~----~~----~~~~~~~~l~Gii~~llg~~ 120 (542)
-++.+.+..++=..||++..+..||+-+.-.-+.++.. + + .+ .....+-++++.+|.++|+.
T Consensus 55 ~~f~sGI~TllQt~fG~RLp~v~G~Sfafl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~vqiilG~s 134 (510)
T KOG1292|consen 55 IFFVSGITTLLQTTFGTRLPLVQGPSFAFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLVQIILGFS 134 (510)
T ss_pred HhhhccHHHHHHHHhhcccccccccceehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHHHHHHhhh
Confidence 46788888899999999999999996543322222221 0 1 11 23567789999999999999
Q ss_pred hh-chhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccCCCcHHHHHHHHHhccCCCchhhHHHHHHHHHHHHHHHHh-
Q psy18113 121 SL-GFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFKPKNFLDMYVQLFKNIGKTKYSDLSLGVACVVLLLFMKRL- 198 (542)
Q Consensus 121 rl-g~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~l~~~~~~- 198 (542)
++ |++.||+++-.+.=.++-+|+-+.....+.+- . +| -+++..+++++++..+
T Consensus 135 Gl~g~l~rfi~Plti~P~v~lvgl~l~~~~~~~~~-----------------~-----~w---eI~l~~~llli~fsqy~ 189 (510)
T KOG1292|consen 135 GLWGNLLRFIGPLTIVPLVALVGLGLFQDGFPKLG-----------------K-----HW---EISLPEILLLILFSQYA 189 (510)
T ss_pred hhHHHHHhhcCChhhhhHHHHHhhhhHHhhhhhhh-----------------h-----he---eecHHHHHHHHHHHHhh
Confidence 97 88999999888877777777655532222110 0 01 1244444444444433
Q ss_pred --hhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHHHHHhcCCC-cc-----C----eeEecccCCCCCCCCC
Q psy18113 199 --QDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIITYVLKNTHE-KV-----P----FALVGNIESGFPSLAF 266 (542)
Q Consensus 199 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~~~~-~~-----~----~~~~g~ip~~~p~~~~ 266 (542)
+++.. . .++.++..+++.+ +.+.+.=..++.+...+. .+ + .+.-+ +=+.-|.+.+
T Consensus 190 ~~~~~~~-~----~~~~~if~~f~vl-------l~i~ivW~~~~iLT~tgay~~~~~~t~~~~RTD~~~-vi~~apWi~v 256 (510)
T KOG1292|consen 190 SLPKKGF-G----SRRIQIFSRFPVL-------LAIAIVWLYCFILTITGAYPYKPTTTQSSCRTDRNG-VISSAPWIRV 256 (510)
T ss_pred hcccccc-c----ccccchHhhccHH-------HHHHHHHHHHHHHHhccccCCCccccCCcccccHhh-hhccCCceee
Confidence 11111 1 1122333333321 222222223333322111 00 0 00011 1112233333
Q ss_pred CCCccccCCCcCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc----CC--CccCCChhHHHHhhhhhHhhhhCCCCCc
Q psy18113 267 PPTHININGTDLGLLDMVSHLNTGIFLVPLVGLVANVAIAKAFS----EG--KIVDASQEMIALGMGNLAGSFINAMPVA 340 (542)
Q Consensus 267 P~~~~~~~~~~~~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a----~~--~~~d~n~EL~a~G~aNivs~~fG~~p~~ 340 (542)
|- +.++..+++++.... ++++-++++++|+++.-.+-+ .+ .+...||...-+|++.+.+|+||.-.++
T Consensus 257 Py-P~QwG~P~f~~~~~f-----~m~aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGig~lL~gl~G~gtG~ 330 (510)
T KOG1292|consen 257 PY-PFQWGPPTFSAGLVF-----AMMAASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGIGSLLAGLFGTGTGS 330 (510)
T ss_pred cC-CCccCCCcccHHHHH-----HHHHHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhHHHHHHHhhCCCccc
Confidence 31 111223333554443 346677889999986544433 22 2567899999999999999999977666
Q ss_pred cchhhh-HHhhhcCcCchhHHHHHHHHHHHHHHH--hhHHHhhhhHHHHHHHHHHHHhhhccH
Q psy18113 341 SSFSRS-AVNNASGVQTTLGGLYTSIIVLLSLSL--LTPYLQYIPQASLAAVLVCAVLTLVEI 400 (542)
Q Consensus 341 ~s~srS-~~~~~~GarT~la~i~~a~~~ll~ll~--~~~ll~~iP~~vLa~ili~~~~~li~~ 400 (542)
..+++- ++---+..-||..--++|.+++++-.+ ++.+++.||.++.||+ ...++.|+.-
T Consensus 331 Tt~~ENigll~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l-~c~~~~mv~a 392 (510)
T KOG1292|consen 331 TTSVENIGLLGVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGL-LCILFGMVGA 392 (510)
T ss_pred eeeccceeeEeeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHH-HHHHHHHHHH
Confidence 555543 333335666777777888887777666 8999999999999994 4556666543
No 25
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.
Probab=98.71 E-value=3e-08 Score=85.05 Aligned_cols=66 Identities=20% Similarity=0.111 Sum_probs=56.0
Q ss_pred ceEEEEEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhhcCC
Q psy18113 464 FEFWLFEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNNFYV 542 (542)
Q Consensus 464 ~~i~i~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~~~ 542 (542)
+++.+++++|+|+|+|++++++++.+.+ .++ ..+.||+|+++|+++|+||+.+|.++.++++++|.
T Consensus 9 ~~~~v~~l~G~L~~~~a~~~~~~l~~~~----------~~~---~~~~vvlDls~v~~iDssg~~~l~~~~~~~~~~g~ 74 (109)
T cd07041 9 DGVLVLPLIGDLDDERAEQLQERLLEAI----------SRR---RARGVIIDLTGVPVIDSAVARHLLRLARALRLLGA 74 (109)
T ss_pred CCEEEEeeeeeECHHHHHHHHHHHHHHH----------HHc---CCCEEEEECCCCchhcHHHHHHHHHHHHHHHHcCC
Confidence 3688999999999999999999987622 112 13369999999999999999999999999998874
No 26
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function. The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.
Probab=98.50 E-value=4.4e-07 Score=77.02 Aligned_cols=68 Identities=21% Similarity=0.277 Sum_probs=57.1
Q ss_pred CceEEEEEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhhcCC
Q psy18113 463 GFEFWLFEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNNFYV 542 (542)
Q Consensus 463 ~~~i~i~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~~~ 542 (542)
++++.+++++|+++|.|++.+++++.+.. +..+ ..+.+|+||++++++|+|++..|.++.++++++|+
T Consensus 7 ~~~~~v~~l~G~l~~~~~~~l~~~~~~~~-----------~~~~-~~~~lilD~~~v~~iDss~~~~L~~~~~~~~~~~~ 74 (107)
T cd07042 7 PPGVLIYRIDGPLFFGNAEYFKDRLLRLV-----------DEDP-PLKVVILDLSAVNFIDSTAAEALEELVKDLRKRGV 74 (107)
T ss_pred CCCEEEEEecCceEeehHHHHHHHHHHHh-----------ccCC-CceEEEEECCCCchhhHHHHHHHHHHHHHHHHCCC
Confidence 45799999999999999999999998722 1110 12479999999999999999999999999998874
No 27
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=98.26 E-value=2.6e-06 Score=71.13 Aligned_cols=64 Identities=17% Similarity=0.114 Sum_probs=55.0
Q ss_pred eEEEEEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhhcCC
Q psy18113 465 EFWLFEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNNFYV 542 (542)
Q Consensus 465 ~i~i~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~~~ 542 (542)
++.+++++|+++|.|++.+.+.+.+.. ++ ..+.+++|++.++++|++|+..|.++.++++++|.
T Consensus 8 ~~~ii~l~G~l~~~~~~~~~~~~~~~~-----------~~---~~~~viid~~~v~~iDs~g~~~L~~l~~~~~~~g~ 71 (99)
T cd07043 8 GVLVVRLSGELDAATAPELREALEELL-----------AE---GPRRLVLDLSGVTFIDSSGLGVLLGAYKRARAAGG 71 (99)
T ss_pred CEEEEEEeceecccchHHHHHHHHHHH-----------Hc---CCCEEEEECCCCCEEcchhHHHHHHHHHHHHHcCC
Confidence 688999999999999999999987721 12 12369999999999999999999999999998763
No 28
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=98.24 E-value=2.6e-06 Score=72.71 Aligned_cols=66 Identities=20% Similarity=0.122 Sum_probs=56.3
Q ss_pred ceEEEEEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhhcCC
Q psy18113 464 FEFWLFEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNNFYV 542 (542)
Q Consensus 464 ~~i~i~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~~~ 542 (542)
+++.+++++|+++|.|++.+++.+.+.. .+.+ ++ .+++|++.++++|++++..|.++.++++++|+
T Consensus 11 ~~~~vi~~~G~l~~~~~~~~~~~l~~~~----------~~~~--~~-~vvidls~v~~iDssgl~~L~~~~~~~~~~~~ 76 (108)
T TIGR00377 11 EGVVIVRLSGELDAHTAPLLREKVTPAA----------ERTG--PR-PIVLDLEDLEFMDSSGLGVLLGRYKQVRRVGG 76 (108)
T ss_pred CCEEEEEEecccccccHHHHHHHHHHHH----------HhcC--CC-eEEEECCCCeEEccccHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999998732 1111 24 69999999999999999999999999998774
No 29
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=97.60 E-value=0.032 Score=56.63 Aligned_cols=255 Identities=16% Similarity=0.220 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHHHHHhhhhch-hhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcccCCCcHHHHHHHHHhccCCCchhhH
Q psy18113 104 AFLTFLTGLVQLTCGLLSLGF-VVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQFKPKNFLDMYVQLFKNIGKTKYSDL 182 (542)
Q Consensus 104 ~~~~~l~Gii~~llg~~rlg~-l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~ 182 (542)
..+.++.|++-++++.+|-|. +++.-++-|-+|.+-=.|+.=..+|+++++...... +..+..+
T Consensus 145 Lalgilvg~fGlil~~~kggS~L~~LTs~gv~ggLllylG~~G~~~qi~kl~~wa~~~---------------~~~~i~f 209 (492)
T PF11840_consen 145 LALGILVGVFGLILSIFKGGSKLVNLTSHGVCGGLLLYLGFVGLIGQIKKLFAWANGF---------------DMGYIAF 209 (492)
T ss_pred HHHHHHHHHHHHHHHHhcchhHHHhhhcCccccceeeeehhhhHHHHHHHHHHHHhcc---------------CccHHHH
Confidence 356789999999999999866 888999999999888888888888988876433221 1122333
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCCchhhhhhhhhHHHhhcccchhHHHHHHHHHHHHhcCCCccCeeEecccCCCCC
Q psy18113 183 SLGVACVVLLLFMKRLQDIKLTDKEPPGVKIKYLKSFLWFISTGRNAFILMGCAIITYVLKNTHEKVPFALVGNIESGFP 262 (542)
Q Consensus 183 ~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~~~i~~~~~~~~~~~~~~~~g~ip~~~p 262 (542)
++-++++++...+.++++++.. ..+..+++.++++.++.. ++.. -+.|+|
T Consensus 210 vvi~~tiv~Ya~L~k~~KrWLa-----------------------IPl~~~~a~~~a~~lGa~-----f~f~--t~pglp 259 (492)
T PF11840_consen 210 VVIIVTIVLYAYLAKIEKRWLA-----------------------IPLCSILAGVLAFALGAP-----FEFT--TEPGLP 259 (492)
T ss_pred HHHHHHHHHHHHHHHhccchhh-----------------------hhHHHHHHHHHHHHcCCC-----ceee--cCCCCC
Confidence 3344445555556666655420 123455666667766532 2211 112333
Q ss_pred CCCCCCCcccc-CCCcC----c---HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc--------CCCccCCChhHHHHhh
Q psy18113 263 SLAFPPTHINI-NGTDL----G---LLDMVSHLNTGIFLVPLVGLVANVAIAKAFS--------EGKIVDASQEMIALGM 326 (542)
Q Consensus 263 ~~~~P~~~~~~-~~~~~----~---~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a--------~~~~~d~n~EL~a~G~ 326 (542)
+++... ..++. . +...+..++.+.+++++= .-+.++ -+.|. ++...|.|+.+....+
T Consensus 260 -----~lnP~YWWge~tGw~LglP~~~hfiav~PFAiLAVaMW-SpDflg-hrvFqelnypk~~~kvlMnvDDTm~~~si 332 (492)
T PF11840_consen 260 -----NLNPMYWWGEETGWQLGLPTLEHFIAVLPFAILAVAMW-SPDFLG-HRVFQELNYPKETKKVLMNVDDTMTMCSI 332 (492)
T ss_pred -----CCCCcccccCCcccccCCCcHHHHHHhccHHHHHHHHh-CchHHH-HHHHHHhcCchhhcceeecccchhHHHHH
Confidence 222211 00111 1 122333333332222221 122222 12222 3346899999999999
Q ss_pred hhhHhhhhCCCCCccchhhhHHhhhcCcCc--hhHHHHHHHHHHHHHHHhhHHHhhhhHHHHHHHHHHHHhhhccHHHHH
Q psy18113 327 GNLAGSFINAMPVASSFSRSAVNNASGVQT--TLGGLYTSIIVLLSLSLLTPYLQYIPQASLAAVLVCAVLTLVEIEIMA 404 (542)
Q Consensus 327 aNivs~~fG~~p~~~s~srS~~~~~~GarT--~la~i~~a~~~ll~ll~~~~ll~~iP~~vLa~ili~~~~~li~~~~~~ 404 (542)
=|++++.+||-..+.| =+|-.--.+=+|- +-..+.+++++++..+.+-|.=-.+=.+++...+++..+-=+-...+
T Consensus 333 RQ~vGs~lGGgN~~Ss-WgTymIPaaIaKRPIpggAiLtg~~Ci~~av~GyPMdlavw~Pvl~vALlvGVflPLleAGm- 410 (492)
T PF11840_consen 333 RQIVGSILGGGNIASS-WGTYMIPAAIAKRPIPGGAILTGLLCIVAAVWGYPMDLAVWPPVLRVALLVGVFLPLLEAGM- 410 (492)
T ss_pred HHHHhhcccCCccccc-chhhhhhHHHhcCCCCchHHHHHHHHHHHHHhcCcchhhhcccHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999887744 3444444444444 45678888888888777666322222344544444433322333443
Q ss_pred HhhccCcc
Q psy18113 405 VLWKTNKR 412 (542)
Q Consensus 405 ~l~~~~~~ 412 (542)
+.+|.+|.
T Consensus 411 qm~r~~k~ 418 (492)
T PF11840_consen 411 QMTRKGKT 418 (492)
T ss_pred HHHhcCCc
Confidence 34444443
No 30
>PF13466 STAS_2: STAS domain
Probab=97.39 E-value=0.00029 Score=56.59 Aligned_cols=58 Identities=19% Similarity=0.212 Sum_probs=50.2
Q ss_pred EEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhhcC
Q psy18113 469 FEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNNFY 541 (542)
Q Consensus 469 ~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~~ 541 (542)
++++|.+.+.+++.+++.+.+ .. ++ + +.+++|+++|.++|+++++.|.+..+.+++.|
T Consensus 1 l~l~G~l~~~~~~~l~~~l~~----------~~-~~---~-~~v~lDls~v~~iDsagl~lL~~~~~~~~~~g 58 (80)
T PF13466_consen 1 LRLSGELDIATAPELRQALQA----------LL-AS---G-RPVVLDLSGVEFIDSAGLQLLLAAARRARARG 58 (80)
T ss_pred CEEEEEEeHHHHHHHHHHHHH----------HH-cC---C-CeEEEECCCCCeecHHHHHHHHHHHHHHHHCC
Confidence 478999999999999999998 32 11 2 35999999999999999999999999998876
No 31
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms]
Probab=97.26 E-value=0.00069 Score=58.80 Aligned_cols=63 Identities=21% Similarity=0.173 Sum_probs=54.1
Q ss_pred EEEEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhhcCC
Q psy18113 467 WLFEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNNFYV 542 (542)
Q Consensus 467 ~i~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~~~ 542 (542)
.++.+.|.|-..++..+++.+.+.+ .+.. .+ .+++|++.|+++|++++..|....+.+++.|+
T Consensus 15 ~vl~l~G~lD~~~a~~~~e~~~~~~----------~~~~--~~-~ivIDls~v~~~dS~gl~~L~~~~~~~~~~g~ 77 (117)
T COG1366 15 LVLPLIGELDAARAPALKETLLEVI----------AASG--AR-GLVIDLSGVDFMDSAGLGVLVALLKSARLRGV 77 (117)
T ss_pred EEEEeeEEEchHHHHHHHHHHHHHH----------hcCC--Cc-EEEEECCCCceechHHHHHHHHHHHHHHhcCC
Confidence 6999999999999999999998733 1221 23 59999999999999999999999999999874
No 32
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=92.30 E-value=6.6 Score=43.69 Aligned_cols=115 Identities=13% Similarity=0.081 Sum_probs=81.2
Q ss_pred cHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCCccCCChhHHHHhhhhhHhhhhCCCCCccchhhhHHhh-------h
Q psy18113 279 GLLDMVSHLNTGIFLVPLVGLVANVAIAKAFSEGKIVDASQEMIALGMGNLAGSFINAMPVASSFSRSAVNN-------A 351 (542)
Q Consensus 279 ~~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a~~~~~d~n~EL~a~G~aNivs~~fG~~p~~~s~srS~~~~-------~ 351 (542)
+|..+..++..+ ++++++..-++++.+..- ..++..-|.+--+..++.++||+.|...+-.-++... +
T Consensus 10 ~~~~l~~Di~aG-ltv~~~~iP~~~ayA~la----glpp~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v~~ 84 (563)
T TIGR00815 10 RLKKFKGDLMAG-LTVGILLIPQAMAYAILA----GLSPIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVIAR 84 (563)
T ss_pred CHHHhhhHHHHH-HHHHHHHHHHHHHHHHHc----CCCchhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHHHH
Confidence 455566666655 678888888888877543 3566667999999999999999988654433333221 1
Q ss_pred cCcCch----------hHHHHHHHHHHHHHHH-hhHHHhhhhHHHHHHHHHHHHhhhc
Q psy18113 352 SGVQTT----------LGGLYTSIIVLLSLSL-LTPYLQYIPQASLAAVLVCAVLTLV 398 (542)
Q Consensus 352 ~GarT~----------la~i~~a~~~ll~ll~-~~~ll~~iP~~vLa~ili~~~~~li 398 (542)
.|.... ..++.+|++.+++.++ ++.+.+++|.+++.|.+--+++.++
T Consensus 85 ~~~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~lrlG~l~~~is~~Vi~Gf~~g~a~~i~ 142 (563)
T TIGR00815 85 VGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRLGFLIEFLSHAVISGFMTGAAITIG 142 (563)
T ss_pred hcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHHHHH
Confidence 222211 6677777777777655 8899999999999998877766655
No 33
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=91.06 E-value=5.4 Score=44.17 Aligned_cols=110 Identities=19% Similarity=0.180 Sum_probs=74.7
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHhcCCCccCCChhHHHHhhhhhHhhhhCCCCCccchhhhHHhhhcC---c---Cc-
Q psy18113 284 VSHLNTGIFLVPLVGLVANVAIAKAFSEGKIVDASQEMIALGMGNLAGSFINAMPVASSFSRSAVNNASG---V---QT- 356 (542)
Q Consensus 284 ~~~l~~~~~~ia~v~~~es~~~~~~~a~~~~~d~n~EL~a~G~aNivs~~fG~~p~~~s~srS~~~~~~G---a---rT- 356 (542)
..++..+ ++++++..=|+++.++. + -.++..-|.+-=++-++-++|||.|.-.+-..++...... + .+
T Consensus 22 ~~Dl~AG-ltva~valP~ama~a~~-a---Gv~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~~i~~~~~~g 96 (554)
T COG0659 22 RGDLLAG-LTVAAVALPLAMAFAIA-A---GVPPEAGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAAVIASLVETG 96 (554)
T ss_pred HHHHHHH-HHHHHHHhHHHHHHHHH-c---CCCHHHHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHHHHHHHHHHH
Confidence 3344434 57777777777776663 2 2889999999999999999999998764433333222211 1 22
Q ss_pred ----hhHHHHHHHHHHHHHHH-hhHHHhhhhHHHHHHHHHHHHhhhc
Q psy18113 357 ----TLGGLYTSIIVLLSLSL-LTPYLQYIPQASLAAVLVCAVLTLV 398 (542)
Q Consensus 357 ----~la~i~~a~~~ll~ll~-~~~ll~~iP~~vLa~ili~~~~~li 398 (542)
-.+.+.+|++.++..++ ++.+.+++|.+++.|.+--+++.++
T Consensus 97 ~~~~~~~tllaGv~~i~~G~lRLG~li~fip~pVl~Gf~~Giai~I~ 143 (554)
T COG0659 97 LALAFLATLLAGVFQILLGLLRLGRLIRFIPRPVLIGFTAGIAILII 143 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHHH
Confidence 24455666666666544 8889999999999998776666554
No 34
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=90.89 E-value=5.5 Score=42.32 Aligned_cols=112 Identities=18% Similarity=0.201 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHH----HHHHhCCCc-----chhhHHhHHHHHHHhhhcCCCccccchhHHHHHHHHHhhhcCCHHHHHH
Q psy18113 35 ITVGLTLIPQAIA----YASLAGLNP-----KYGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLCLTYTHDTSLEMVAF 105 (542)
Q Consensus 35 i~~~~~~iP~~~a----ya~lag~pp-----~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~ 105 (542)
++.+++..-++++ .+...|-++ .-++.+--++.++.++||+.+..............+ . ..-.
T Consensus 225 ~~~~lv~~~esig~~~a~~~~~g~~~~~~~~~~~l~~~Gi~~i~aglfG~~p~t~~~~~~~~~~~tg-------~-~sr~ 296 (406)
T TIGR03173 225 IIVYLVSMVETTGDFLALGEITGRPITEKDLAGGLRADGLGSALGGLFNTFPYTSFSQNVGLVQLTG-------V-KSRY 296 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCchhccchHHhccHHHHHHHHhCCCCCcchhhhHHHHHHhC-------C-CchH
Confidence 3444555554444 444456432 368999999999999999977544333222211111 1 1122
Q ss_pred HHHHHHHHHHHHHhh-hhchhhhhcchhHHHHHHHHHHHHHHHHhhhhhh
Q psy18113 106 LTFLTGLVQLTCGLL-SLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFL 154 (542)
Q Consensus 106 ~~~l~Gii~~llg~~-rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~ 154 (542)
....+|++.++++++ +++.+..++|.||+.|.+...=-.+....++.+.
T Consensus 297 ~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~~l~~~~~i~~~g~~~l~ 346 (406)
T TIGR03173 297 VVAAAGVILVLLGLFPKLAALVASIPQPVLGGAGLVMFGMVAASGIRILS 346 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346788888888887 5899999999999999655433344444444443
No 35
>PRK11660 putative transporter; Provisional
Probab=89.72 E-value=12 Score=41.73 Aligned_cols=113 Identities=18% Similarity=0.212 Sum_probs=76.0
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCCccCCChhHHHHhhhhhHhhhhCCCCCccchhhhHHhhhc-------
Q psy18113 280 LLDMVSHLNTGIFLVPLVGLVANVAIAKAFSEGKIVDASQEMIALGMGNLAGSFINAMPVASSFSRSAVNNAS------- 352 (542)
Q Consensus 280 ~~~~~~~l~~~~~~ia~v~~~es~~~~~~~a~~~~~d~n~EL~a~G~aNivs~~fG~~p~~~s~srS~~~~~~------- 352 (542)
+..+..++..+ ++++++..-|+++.+.. + | ..+..-|.+--++.++-++||+.+...+-.-+......
T Consensus 26 ~~~l~~D~iAG-ltv~~~~iPq~mayA~l-a-g--~pp~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~~~~~~~~ 100 (568)
T PRK11660 26 AARFTRDLIAG-ITVGIIAIPLAMALAIA-S-G--VPPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQF 100 (568)
T ss_pred HHhhhHHHHHH-HHHHHHHHHHHHHHHHH-c-C--CChHHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHHHHHHHHh
Confidence 33445555545 67888999999887753 3 2 33444699999999999999999865433332221111
Q ss_pred CcC-chhHHHHHHHHHHHHHHH-hhHHHhhhhHHHHHHHHHHHHhhh
Q psy18113 353 GVQ-TTLGGLYTSIIVLLSLSL-LTPYLQYIPQASLAAVLVCAVLTL 397 (542)
Q Consensus 353 Gar-T~la~i~~a~~~ll~ll~-~~~ll~~iP~~vLa~ili~~~~~l 397 (542)
|-. .-.+.+.+|++.+++.++ ++.+.+++|.+++.|.+.-+++-+
T Consensus 101 ~~~~~~~~~~l~Gii~~l~gllrlG~l~~fip~pVi~Gf~~g~al~I 147 (568)
T PRK11660 101 GLAGLLVATLMSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVI 147 (568)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCcHHHHHHHHHHHHHHH
Confidence 110 123467788887777767 888999999999999877666543
No 36
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=89.30 E-value=6 Score=42.37 Aligned_cols=119 Identities=13% Similarity=0.086 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHH----HHHHHhCCCc------chhhHHhHHHHHHHhhhcCCCccccchhHHHHHHHHHhhhcCCH
Q psy18113 31 VLAGITVGLTLIPQAI----AYASLAGLNP------KYGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLCLTYTHDTSL 100 (542)
Q Consensus 31 i~aGi~~~~~~iP~~~----aya~lag~pp------~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~~~~~~~~ 100 (542)
++.-+.++++.+-+.+ |.+...+-++ .-|+.+-.+++++.++||+.+..+.+-...+..++.-
T Consensus 242 il~~~~~~lv~~~e~iG~~~a~~~~~~~~~~~~~~l~rgi~~dGi~s~laglfg~~p~tt~sqNvGvi~~TgV------- 314 (433)
T PRK11412 242 ILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGD------- 314 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccccchhhccHHHHHHHhcCCCCCCchhhhhhhhhhcCC-------
Confidence 4444455554444433 3334444322 3589999999999999999777665444333222211
Q ss_pred HHHHHHHHHHHHHHHHHHhh-hhchhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcc
Q psy18113 101 EMVAFLTFLTGLVQLTCGLL-SLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQ 157 (542)
Q Consensus 101 ~~~~~~~~l~Gii~~llg~~-rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~ 157 (542)
..-.....+|++++++|++ |++.+..-+|.||++|.+.-.--.+...+++.+-+.+
T Consensus 315 -~SR~v~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~~Fg~I~~~Gi~~l~~~~ 371 (433)
T PRK11412 315 -YRRRSFIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLVSYLPLLGSALVFSQQIT 371 (433)
T ss_pred -chhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1223456788899999998 5899999999999999988877788888887765444
No 37
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=88.97 E-value=4 Score=43.56 Aligned_cols=120 Identities=14% Similarity=0.275 Sum_probs=79.6
Q ss_pred hHHHHHHHHHHHHHHHH----HHHHHhCCC----c--chhhHHhHHHHHHHhhhcCCCccccchhHHHHHHHHHhhhcCC
Q psy18113 30 DVLAGITVGLTLIPQAI----AYASLAGLN----P--KYGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLCLTYTHDTS 99 (542)
Q Consensus 30 Di~aGi~~~~~~iP~~~----aya~lag~p----p--~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~~~~~~~ 99 (542)
.+..=+..+++..-+++ +.+..+|-+ + .-++.+-.++.++.++||+.+............. .+
T Consensus 235 ~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~aglfG~~p~t~~sen~g~~~~-------T~ 307 (415)
T TIGR00801 235 AILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLLAGLFGGFPNTTFAQNIGVIAL-------TR 307 (415)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHHHHhcCCCCCcchhhhheeeee-------cC
Confidence 33333445555555554 444456653 2 3689999999999999999776654432222111 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-hhchhhhhcchhHHHHHHHHHHHHHHHHhhhhhhCcc
Q psy18113 100 LEMVAFLTFLTGLVQLTCGLL-SLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLGIQ 157 (542)
Q Consensus 100 ~~~~~~~~~l~Gii~~llg~~-rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~ 157 (542)
. ..-.....+|++.++++++ |++.+...+|.||+.|.....--.+..+.++.+...+
T Consensus 308 ~-~sr~~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~~l~~~~~i~~~gi~~l~~~~ 365 (415)
T TIGR00801 308 V-ASRWVIVGAAVILIALGFFPKIAALITSIPSPVLGGASIVMFGMIAASGIRILIRNK 365 (415)
T ss_pred C-CchHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 1 1222567788889999988 6899999999999999888666667766666655443
No 38
>PRK10720 uracil transporter; Provisional
Probab=84.75 E-value=10 Score=40.57 Aligned_cols=113 Identities=12% Similarity=0.232 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHHH----HhCCC------cchhhHHhHHHHHHHhhhcCCCccccchhHHHHHHHHHhhhcCCHHHHH
Q psy18113 35 ITVGLTLIPQAIAYAS----LAGLN------PKYGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLCLTYTHDTSLEMVA 104 (542)
Q Consensus 35 i~~~~~~iP~~~aya~----lag~p------p~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~~~~~~~~~~~~ 104 (542)
+..+++...++++-.. ..+-+ ..-++.+-.+++++.++||++|.....-......++ + -..-
T Consensus 231 ~~~~lv~~~EsiG~~~a~~~~~~~~~~~~~~~~r~l~adGlatii~glfG~~p~tty~en~g~ia~T-------~-v~sr 302 (428)
T PRK10720 231 LPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAIT-------R-VYST 302 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccchHhhhhHHHHHHHhcCCCCccccccccceeeec-------c-cchh
Confidence 4444555566665332 23322 245899999999999999998765533222111111 1 0122
Q ss_pred HHHHHHHHHHHHHHhh-hhchhhhhcchhHHHHHHHHHHHHHHHHhhhhhhC
Q psy18113 105 FLTFLTGLVQLTCGLL-SLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFLG 155 (542)
Q Consensus 105 ~~~~l~Gii~~llg~~-rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~G 155 (542)
.....+|++++++|++ |++.+...+|.||++|.....--.+..+.++.+..
T Consensus 303 ~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i~~fg~i~~~Gi~~l~~ 354 (428)
T PRK10720 303 WVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSLLLYGVIGASGIRVLIE 354 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2335578888899887 58999999999999999997777788888887743
No 39
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only]
Probab=83.95 E-value=1.1 Score=37.17 Aligned_cols=31 Identities=16% Similarity=0.135 Sum_probs=29.4
Q ss_pred EEEEEccCCCcccHHHHHHHHHHHHHHhhcC
Q psy18113 511 YIIINCSHIDKTDYTAAKVKTFLFRDCNNFY 541 (542)
Q Consensus 511 ~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~~ 541 (542)
.+=+|+++|..+|++|...|.++.+.+++.|
T Consensus 41 ~~~idLs~v~rvDSaglALL~~~~~~~k~~g 71 (99)
T COG3113 41 TVRIDLSGVSRVDSAGLALLLHLIRLAKKQG 71 (99)
T ss_pred eEEEehhhcceechHHHHHHHHHHHHHHHcC
Confidence 5889999999999999999999999999987
No 40
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=78.13 E-value=17 Score=38.97 Aligned_cols=111 Identities=13% Similarity=0.228 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHH----HHHhC--CCc--chhhHHhHHHHHHHhhhcCCCccccchhHHHHHHHHHhhhcCCHHHHHHH
Q psy18113 35 ITVGLTLIPQAIAY----ASLAG--LNP--KYGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLCLTYTHDTSLEMVAFL 106 (542)
Q Consensus 35 i~~~~~~iP~~~ay----a~lag--~pp--~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~ 106 (542)
+..+++..-++++- +...| .++ .-|+.+-.+++++.+++|+++....+-......++ +. ..-..
T Consensus 253 ~~~~lv~~~esiG~~~a~~~~~~~~~~~~i~r~l~adGl~t~~agl~g~~p~tt~~en~g~i~~T-------~v-~SR~v 324 (429)
T TIGR03616 253 APVALILVAENLGHFKAVAGMTGRNLDPYMGRAFVGDGLATMLSGSVGGTGVTTYAENIGVMAVT-------KV-YSTLV 324 (429)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhCCCCCchhccchhhhhHHHHHHHhcCCCCCcceeeeeeeeeec-------Cc-chHHH
Confidence 34444455454443 33444 333 36899999999999999988766543322211111 10 11234
Q ss_pred HHHHHHHHHHHHhh-hhchhhhhcchhHHHHHHHHHHHHHHHHhhhhh
Q psy18113 107 TFLTGLVQLTCGLL-SLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYF 153 (542)
Q Consensus 107 ~~l~Gii~~llg~~-rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~ 153 (542)
...+|++++++|++ |++.+...+|.||++|.+.-.--.+..+.++.+
T Consensus 325 ~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i~~fg~i~~~Gi~~l 372 (429)
T TIGR03616 325 FVAAAVFAILLGFSPKFGALIHTIPVAVLGGASIVVFGLIAVAGARIW 372 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46678888888888 489999999999999999877777777777743
No 41
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=65.97 E-value=88 Score=32.96 Aligned_cols=117 Identities=15% Similarity=0.184 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHHHHHHHH----HHHhCCCc------chhhHHhHHHHHHHhhhcCCCccccchhHHHHHHHHHhhhcCC
Q psy18113 30 DVLAGITVGLTLIPQAIAY----ASLAGLNP------KYGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLCLTYTHDTS 99 (542)
Q Consensus 30 Di~aGi~~~~~~iP~~~ay----a~lag~pp------~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~~~~~~~ 99 (542)
.++.-+...++..-.+++- +..+|.+. .-|+.+-.+++++.++||+++..+............ +
T Consensus 233 ~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~~~r~l~~dg~~~~l~gl~G~~~~t~~~en~g~i~~t~--v---- 306 (389)
T PF00860_consen 233 AILTFLIFALVAMFESIGTIVAVARIAGKDDPRPPRIRRGLLADGLGTILAGLFGTSPTTTYSENAGGIAATG--V---- 306 (389)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCCCCCHHHHHHHHHHHHHHHHHHT---EEE-HHHHHHHHHHT--B----
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCccchhhcccceeeeeeeeechhhcCCCCccccccchhhhhhc--c----
Confidence 4445555555555555543 34455432 348999999999999999977766544433221111 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-hhchhhhhcchhHHHHHHHHHHHHHHHHhhhhhh
Q psy18113 100 LEMVAFLTFLTGLVQLTCGLL-SLGFVVEFVSLPVVSGFTSSTAIIMASSQLKYFL 154 (542)
Q Consensus 100 ~~~~~~~~~l~Gii~~llg~~-rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~~~~ 154 (542)
..--..+.+|++.++++++ +++.+...+|.||+.|...-.--.++.++++.+-
T Consensus 307 --~Sr~~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~i~~~gi~~i~ 360 (389)
T PF00860_consen 307 --ASRRVGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLVLFGMIMMSGIRNID 360 (389)
T ss_dssp ----HHHHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --ccceeeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHhHhhe
Confidence 1123456677777777776 5789999999999999887766667777777655
No 42
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=64.14 E-value=20 Score=35.63 Aligned_cols=117 Identities=11% Similarity=0.135 Sum_probs=73.9
Q ss_pred CCChhhhhHhHHHHHHHHHHHHHHHHHHHHH----hC--CCcchhhHHhHHHHHHHhhhcCCCccccchhHHHHHHHHHh
Q psy18113 21 KYNVNAAVSDVLAGITVGLTLIPQAIAYASL----AG--LNPKYGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLCLTY 94 (542)
Q Consensus 21 ~y~~~~l~~Di~aGi~~~~~~iP~~~aya~l----ag--~pp~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~~ 94 (542)
.++++.+..-+...++.+++..-+++..+.. .| .++-.=|.+-.++.++.++||+-|... -.+-.++-...
T Consensus 140 ~~~~~~~~~~~~~a~~ia~v~~~~s~~~~~~~~~~~~~~~d~n~El~a~G~aNi~s~~~gg~p~~~--s~srs~~~~~~- 216 (280)
T PF00916_consen 140 DISWSLILDLLPTALAIAIVGFIESLLIAKSIAKKTGYRIDPNQELIALGLANIVSGLFGGMPGSG--SFSRSAVNYRA- 216 (280)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHhhhccccchhhccccccc--ccccchHHHhc-
Confidence 5567777777778888898888888877643 22 344556889999999999999855432 11111111110
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHhhhhchhhhhcchhHHHHHHHHHHHHHH
Q psy18113 95 THDTSLEMVAFLTFLTGLVQLTCGLLSLGFVVEFVSLPVVSGFTSSTAIIMA 146 (542)
Q Consensus 95 ~~~~~~~~~~~~~~l~Gii~~llg~~rlg~l~~~ip~~V~~Gf~~gigl~i~ 146 (542)
-.+ .-..++++|++.++.-+ -++.+.+|+|.+++.|.+--+|+.++
T Consensus 217 Ga~-----t~~s~~~~~~~~l~~l~-~~~~~l~~iP~~~La~ili~~~~~l~ 262 (280)
T PF00916_consen 217 GAR-----TRLSGLISALFVLLVLL-FLAPLLAYIPKAVLAAILIVVGISLI 262 (280)
T ss_pred Ccc-----eeehhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 111 12234444544433333 25578999999999999988887643
No 43
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=58.36 E-value=15 Score=39.39 Aligned_cols=92 Identities=13% Similarity=0.228 Sum_probs=61.0
Q ss_pred hhhHHhHHHHHHHhhhcCCCccccchhHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHhh-hhchhhhhcchhHHHH
Q psy18113 58 YGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLCLTYTHDTSLEMVAFLTFLTGLVQLTCGLL-SLGFVVEFVSLPVVSG 136 (542)
Q Consensus 58 ~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~l~Gii~~llg~~-rlg~l~~~ip~~V~~G 136 (542)
-|+.+--++.++.++||+.|+...+-...+--++ +. +---....+|++.+++|++ |++.+.+-+|.||++|
T Consensus 284 rg~~aDGlat~iag~fg~~p~TtfaqNiGvv~lT-------~v-~Sr~V~~~aavili~lgl~pk~~al~~sIP~pVlGG 355 (451)
T COG2233 284 RGLLADGLATLIAGLFGGFPNTTFAQNIGVVALT-------GV-YSRYVIAGAAVILILLGLFPKFGALIQSIPSPVLGG 355 (451)
T ss_pred cceeeccHHHHHHHhcCCCCCCchhhceeeeeec-------cC-ChhHHHHHHHHHHHHHHhhHHHHHHHHhCChhhhhH
Confidence 4778888888888999998887655432221111 00 1223445678888899988 5899999999999998
Q ss_pred HHHHHHHHHHHHhhhhhhCcc
Q psy18113 137 FTSSTAIIMASSQLKYFLGIQ 157 (542)
Q Consensus 137 f~~gigl~i~~~ql~~~~G~~ 157 (542)
..--.=-.+..+.++.+-..+
T Consensus 356 a~ivmFG~Ia~sGir~l~~~~ 376 (451)
T COG2233 356 AMLVLFGMIAASGIRILIRNK 376 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 766555555555555544333
No 44
>PF06686 SpoIIIAC: Stage III sporulation protein AC/AD protein family
Probab=53.20 E-value=38 Score=25.11 Aligned_cols=45 Identities=13% Similarity=0.211 Sum_probs=36.3
Q ss_pred HHHHHHHHHhhhcCC-HHHHHHHHHHHHHHHHHHHhhhhchhhhhc
Q psy18113 85 SIMALLCLTYTHDTS-LEMVAFLTFLTGLVQLTCGLLSLGFVVEFV 129 (542)
Q Consensus 85 ~~~~~~~~~~~~~~~-~~~~~~~~~l~Gii~~llg~~rlg~l~~~i 129 (542)
+..+.+.+....+.+ +|++..+++.+|++.+.+.+-+++.+.+.+
T Consensus 9 gii~~~l~~vlk~~~~~e~a~~isla~~i~I~~~~~~~i~~l~~~i 54 (58)
T PF06686_consen 9 GIIAAFLALVLKQAGEPEYASLISLAGGILIFLLVLPKISSLFETI 54 (58)
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666677777 999999999999999999998888877654
No 45
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=45.19 E-value=53 Score=29.60 Aligned_cols=58 Identities=9% Similarity=-0.046 Sum_probs=41.4
Q ss_pred EEEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhh
Q psy18113 468 LFEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNN 539 (542)
Q Consensus 468 i~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~ 539 (542)
+++++|++.-.+.+++.+.+++ .. +++ ..+.|+++... .+-|.++.+.+.+..+++++
T Consensus 1 vi~i~g~I~~~~~~~l~~~l~~----------a~-~d~--~~~~ivl~~~s-~Gg~~~~~~~i~~~l~~~~k 58 (161)
T cd00394 1 VIFINGVIEDVSADQLAAQIRF----------AE-ADN--SVKAIVLEVNT-PGGRVDAGMNIVDALQASRK 58 (161)
T ss_pred CEEEEeEEccchHHHHHHHHHH----------HH-hCC--CCceEEEEEEC-CCcCHHHHHHHHHHHHHhCC
Confidence 4678899998999999999987 21 121 24468888864 44588888888777776653
No 46
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments. Some members have an additional pair of N-terminal transmembrane helices. The functions of the proteins in this family are unknown.
Probab=43.68 E-value=62 Score=30.55 Aligned_cols=57 Identities=28% Similarity=0.279 Sum_probs=43.1
Q ss_pred hhhhHHHHHHHHHHHHhhhc-cHHHHHHhhccCccchHHHHHHHHHHHHHhhHHHHHH
Q psy18113 379 QYIPQASLAAVLVCAVLTLV-EIEIMAVLWKTNKRNFLTLVVTFAACLLIGIEIGLLC 435 (542)
Q Consensus 379 ~~iP~~vLa~ili~~~~~li-~~~~~~~l~~~~~~d~~v~~~t~~~~l~~~~~~Gi~~ 435 (542)
..+...+|-.+++.+|+++= |...++++++.+++-..+-+.+.+.++..+...+...
T Consensus 23 ~~~~~~~L~lLLF~VGi~lG~~~~~l~~l~~~g~~~Llipl~tIlGSllgg~l~~~ll 80 (191)
T PF03956_consen 23 DKISTYALYLLLFLVGIDLGSNREILRQLRSLGKRALLIPLATILGSLLGGLLASLLL 80 (191)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67888899999999999996 7778889998988777776666666655554444443
No 47
>PRK12657 putative monovalent cation/H+ antiporter subunit F; Reviewed
Probab=40.29 E-value=47 Score=27.87 Aligned_cols=30 Identities=20% Similarity=0.592 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCChh
Q psy18113 291 IFLVPLVGLVANVAIAKAFSEGKIVDASQE 320 (542)
Q Consensus 291 ~~~ia~v~~~es~~~~~~~a~~~~~d~n~E 320 (542)
++.+++++|+.+++.+|-+++|+..+.|+|
T Consensus 68 aLvlAll~Fv~tva~ARyl~~g~~~~~~~~ 97 (100)
T PRK12657 68 IMLIAIISFVSSVSISRFIGGGHVFNGNNK 97 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccCCCc
Confidence 467899999999999999987765554443
No 48
>PHA00736 hypothetical protein
Probab=39.17 E-value=1.4e+02 Score=22.69 Aligned_cols=68 Identities=22% Similarity=0.384 Sum_probs=43.5
Q ss_pred HHHHHHHHhCCCcchhh-HHhHHHHHHHhhhcCCCccccchhHHHHHHHHHhhhcCCHHHHHHHHHHHHH
Q psy18113 44 QAIAYASLAGLNPKYGL-YSSIFGGVMYIFLGTTKQLSVGPTSIMALLCLTYTHDTSLEMVAFLTFLTGL 112 (542)
Q Consensus 44 ~~~aya~lag~pp~~gl-~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~l~Gi 112 (542)
.+++.|.-.|+.|+.+. .-...-++.|-.-|.-|...+|-.+..+++.-.-.. .-|.......+++|.
T Consensus 3 daislal~tglgpvi~viiil~mmgltykmagkipaii~giastf~lmfmdflp-lfwgi~vifgliag~ 71 (79)
T PHA00736 3 DAISLALQTGLGPVIAIIIILAMMGLTYKMAGKIPAILVGIASTFTLMFMDFLP-LFWGITVIFGLIAGL 71 (79)
T ss_pred hHHHHHHHcCCccHHHHHHHHHHHhhHHHHhCCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 36777778899887764 334455677777888888888888888777654331 223334444444444
No 49
>PF14213 DUF4325: Domain of unknown function (DUF4325)
Probab=37.59 E-value=96 Score=24.13 Aligned_cols=28 Identities=7% Similarity=0.139 Sum_probs=21.6
Q ss_pred EEEEEccCCCcccHHHHHH-HHHHHHHHh
Q psy18113 511 YIIINCSHIDKTDYTAAKV-KTFLFRDCN 538 (542)
Q Consensus 511 ~vIlD~~~v~~iD~ta~~~-l~~l~~~~~ 538 (542)
.|++||++|..+-+|-++. +.++.+++.
T Consensus 19 ~V~lDF~gv~~~~ssFl~eafg~l~~~~~ 47 (74)
T PF14213_consen 19 KVVLDFEGVESITSSFLNEAFGQLVREFG 47 (74)
T ss_pred eEEEECCCcccccHHHHHHHHHHHHHHcC
Confidence 3999999999998887765 566666544
No 50
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=36.96 E-value=4e+02 Score=28.23 Aligned_cols=70 Identities=21% Similarity=0.201 Sum_probs=41.1
Q ss_pred HHHHhhhhhHhhhhCCCCCccchhhhHHhhh---cCcCchh-----HHHHHHHHHHHHHH--HhhHHHhhhhHHHHHHHH
Q psy18113 321 MIALGMGNLAGSFINAMPVASSFSRSAVNNA---SGVQTTL-----GGLYTSIIVLLSLS--LLTPYLQYIPQASLAAVL 390 (542)
Q Consensus 321 L~a~G~aNivs~~fG~~p~~~s~srS~~~~~---~GarT~l-----a~i~~a~~~ll~ll--~~~~ll~~iP~~vLa~il 390 (542)
.++.|++++.=|..-=+|+..+-|--....- .++- .+ +.+++++++++..+ .+..+.++||.++.++++
T Consensus 64 ~~~~Gl~ti~lS~~~r~Pi~~awStPGaAll~~~~~~~-~~~eavGAfiv~g~lilllGltG~f~rl~~~IP~~Va~amL 142 (395)
T TIGR00843 64 GIAAAVSGIFLSIRFKTPVLTAWSAPGAALLVTGFPGI-SLNEAIAAFITAAALIFLCGITGLFAKLLKIIPHGIAAAML 142 (395)
T ss_pred HHHHHHHHHHHHHHHcCCeeeecCchHHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 3666666666666667777766662222211 1111 23 34555555444332 266788999999999988
Q ss_pred H
Q psy18113 391 V 391 (542)
Q Consensus 391 i 391 (542)
-
T Consensus 143 A 143 (395)
T TIGR00843 143 A 143 (395)
T ss_pred H
Confidence 3
No 51
>COG1296 AzlC Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]
Probab=35.15 E-value=75 Score=31.13 Aligned_cols=82 Identities=22% Similarity=0.375 Sum_probs=53.6
Q ss_pred hhhhhHhHHHHHHHHHHHHHHHHHHHHHh---CCCcchhhHHhHHHHHHHhhhcCCCccccchhHHHHHHHHHhhhcCCH
Q psy18113 24 VNAAVSDVLAGITVGLTLIPQAIAYASLA---GLNPKYGLYSSIFGGVMYIFLGTTKQLSVGPTSIMALLCLTYTHDTSL 100 (542)
Q Consensus 24 ~~~l~~Di~aGi~~~~~~iP~~~aya~la---g~pp~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~~~~~~~~~~~~~~ 100 (542)
++.+|+.+.+++-+.+-.+|.+++|+.++ |+++ +++.+...++|+ |+|..+ ...++ ....++
T Consensus 9 ~~~f~~G~~~~~Pi~lg~ip~Gl~fG~~a~~~G~s~---~e~~lmS~~iyA--GasQfv------~i~L~----~~~~~~ 73 (238)
T COG1296 9 RAEFRQGLKASLPILLGYLPIGLAFGLLAVALGFSP---LEAILMSLLIYA--GASQFV------AIGLL----AAGAPW 73 (238)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHcCCcH---HHHHHHHHHHHc--cHHHHH------HHHHH----HcCCcH
Confidence 57899999999999999999999999885 6666 455555555554 332222 11112 122344
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy18113 101 EMVAFLTFLTGLVQLTCGLL 120 (542)
Q Consensus 101 ~~~~~~~~l~Gii~~llg~~ 120 (542)
-.+...+|++-.=.+++|..
T Consensus 74 l~i~lttflVN~RHilyg~s 93 (238)
T COG1296 74 LAIALTTFLVNSRHILYGAS 93 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45556777777766666664
No 52
>KOG1288|consensus
Probab=34.97 E-value=2.9e+02 Score=31.45 Aligned_cols=76 Identities=17% Similarity=0.100 Sum_probs=38.8
Q ss_pred CChhHHHHhhhhhHhhhhCCCCCccchhhhHHhhhcCcCchhHHHHHHHHHHHHHHHhhH----------------HHhh
Q psy18113 317 ASQEMIALGMGNLAGSFINAMPVASSFSRSAVNNASGVQTTLGGLYTSIIVLLSLSLLTP----------------YLQY 380 (542)
Q Consensus 317 ~n~EL~a~G~aNivs~~fG~~p~~~s~srS~~~~~~GarT~la~i~~a~~~ll~ll~~~~----------------ll~~ 380 (542)
..+|=++.=.+=+.+|-.|-|.+....++-.--.++=.|.-++++..-.++=+++.|+.. -++.
T Consensus 291 ~~~~~F~~~FgV~F~g~tGimAGAnMSgELk~PSkSIP~GTl~ava~Tf~~Yvl~~flm~~t~~r~~Lq~dy~v~~~isl 370 (945)
T KOG1288|consen 291 GGYEDFASTFGVFFPGTTGIMAGANMSGELKAPSKSIPKGTLSAVAFTFFVYVLVIFLMGCTVPRTLLQNDYDVMMHISL 370 (945)
T ss_pred CCceehhhhheeeeccchhhhcCCCcCccccCccccCCccchHHHHHHHHHHHHHHHHhccCcchHHhhhchhheeeccc
Confidence 444544444444455555555555444444444444456666666665555555545432 1244
Q ss_pred hhHHHHHHHHHH
Q psy18113 381 IPQASLAAVLVC 392 (542)
Q Consensus 381 iP~~vLa~ili~ 392 (542)
-|..++-||+-.
T Consensus 371 ~p~fi~iGi~st 382 (945)
T KOG1288|consen 371 HPPFILIGILST 382 (945)
T ss_pred cchHHHHHHHHH
Confidence 566666665543
No 53
>TIGR00210 gltS sodium--glutamate symport carrier (gltS).
Probab=33.69 E-value=77 Score=33.59 Aligned_cols=41 Identities=22% Similarity=0.408 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhh---hhchhhh-hcchhHHHHHHHHHHHHHH
Q psy18113 106 LTFLTGLVQLTCGLL---SLGFVVE-FVSLPVVSGFTSSTAIIMA 146 (542)
Q Consensus 106 ~~~l~Gii~~llg~~---rlg~l~~-~ip~~V~~Gf~~gigl~i~ 146 (542)
.|+....+.+++|.. |...+-| ++|.||++|++.++.+.+.
T Consensus 7 ~t~~la~~lLllG~~Lr~kv~~Lqk~~IPapViGGll~al~l~l~ 51 (398)
T TIGR00210 7 ATLVVAILVLLLGRYLVKKIKFLKSFNIPEPVVGGVLVALALLLI 51 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 345555666666664 3444555 7899999999998777665
No 54
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=31.29 E-value=1.8e+02 Score=27.48 Aligned_cols=61 Identities=10% Similarity=-0.020 Sum_probs=43.4
Q ss_pred EEEEEeCCccc---cccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHhhc
Q psy18113 466 FWLFEPSGGLL---FPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCNNF 540 (542)
Q Consensus 466 i~i~r~~g~Lf---F~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~~~ 540 (542)
+.+++++|.+. =...+++.+.+++ .. +++ ..+.|+++... .+-|....+.+.+..+.+++.
T Consensus 2 v~vi~i~g~i~~~~~~~~~~l~~~l~~----------a~-~d~--~i~~ivl~~~s-~Gg~~~~~~~i~~~i~~~~~~ 65 (208)
T cd07023 2 IAVIDIEGTISDGGGIGADSLIEQLRK----------AR-EDD--SVKAVVLRINS-PGGSVVASEEIYREIRRLRKA 65 (208)
T ss_pred EEEEEEEEEEcCCCCCCHHHHHHHHHH----------HH-hCC--CCcEEEEEEEC-CCCCHHHHHHHHHHHHHHHhc
Confidence 56888999988 6677888888877 21 121 24468888864 667888888888777777653
No 55
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=31.23 E-value=1.6e+02 Score=27.90 Aligned_cols=58 Identities=5% Similarity=0.037 Sum_probs=41.9
Q ss_pred EEEEEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHh
Q psy18113 466 FWLFEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCN 538 (542)
Q Consensus 466 i~i~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~ 538 (542)
+.+++++|.+. .+.+.+.+.+++ .. +++ ..+.|+|+.. ..+-|....+.+.+..++++
T Consensus 2 v~vi~i~g~i~-~s~~~l~~~l~~----------a~-~d~--~i~~vvl~~~-s~Gg~~~~~~~l~~~i~~~~ 59 (207)
T TIGR00706 2 IAILPVSGAIA-VSPEDFDKKIKR----------IK-DDK--SIKALLLRIN-SPGGTVVASEEIYEKLKKLK 59 (207)
T ss_pred EEEEEEEEEEe-cCHHHHHHHHHH----------Hh-hCC--CccEEEEEec-CCCCCHHHHHHHHHHHHHhc
Confidence 67899999998 788888888887 21 121 2446999886 45568888877777777665
No 56
>COG3715 ManY Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]
Probab=30.66 E-value=3e+02 Score=27.36 Aligned_cols=64 Identities=23% Similarity=0.310 Sum_probs=42.0
Q ss_pred cCCChhHHHHhhhhhHhhhhCCCCCccchhhhHHhhhcCcCchhHHHHHHHHHHHHHHHhhHHHh
Q psy18113 315 VDASQEMIALGMGNLAGSFINAMPVASSFSRSAVNNASGVQTTLGGLYTSIIVLLSLSLLTPYLQ 379 (542)
Q Consensus 315 ~d~n~EL~a~G~aNivs~~fG~~p~~~s~srS~~~~~~GarT~la~i~~a~~~ll~ll~~~~ll~ 379 (542)
+-..-||...|..|+.+ -.--=|.+++.--|...+.+|-.++-+..-.++-+.....++.-+.+
T Consensus 51 iGatLEL~~LG~~~iGg-avpPD~~~~si~~t~~aI~sg~~~~~~a~~lAiPiA~a~q~l~~~~r 114 (265)
T COG3715 51 IGATLELAALGWANIGG-AVPPDVALASIIGTAFAITSGQGIPEAALALAIPIAVAGQFLTTFVR 114 (265)
T ss_pred HhHHHHHHHHhCcCccc-CCCCchHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888999998877 23333667888889999999887666555555555544444444333
No 57
>PF05437 AzlD: Branched-chain amino acid transport protein (AzlD); InterPro: IPR008407 This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD, a member of this group, has been shown by mutational analysis to be involved in branched-chain amino acid transport, and to be involved in conferring resistance to 4-azaleucine []. However, its exact role in these processes is not yet clear []. Based on its hydropathy profile, it has been suggested to be a membrane protein [].
Probab=29.71 E-value=2e+02 Score=23.56 Aligned_cols=62 Identities=19% Similarity=0.295 Sum_probs=33.7
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhccHHHHHHhhccCccchHHHHHHHHHHHHH-hhHHHHHHHHHHHH
Q psy18113 376 PYLQYIPQASLAAVLVCAVLTLVEIEIMAVLWKTNKRNFLTLVVTFAACLLI-GIEIGLLCGICLDI 441 (542)
Q Consensus 376 ~ll~~iP~~vLa~ili~~~~~li~~~~~~~l~~~~~~d~~v~~~t~~~~l~~-~~~~Gi~~Gi~~s~ 441 (542)
.+++++|.++++++++.....--+..+ -..+..+..-..+++...... ++...++.|++.-.
T Consensus 34 ~~l~~vp~avl~aLv~~~i~~~~~~~~----~~~~~~~l~a~~~~~~~~~~~~~~~~~v~~G~~~~~ 96 (99)
T PF05437_consen 34 RFLRYVPPAVLAALVVPSIFFPTGSLE----LSLGNPYLIAALVAALVALRTRNLLLSVLAGVAAFA 96 (99)
T ss_pred HHHHHhHHHHHHHHHHHHHccCccccc----cccchHHHHHHHHHHHHHHHHcchHHHHHHHHHHHH
Confidence 578999999999977765542221110 011222333334444444433 67777777776543
No 58
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=29.56 E-value=2e+02 Score=27.39 Aligned_cols=62 Identities=10% Similarity=-0.024 Sum_probs=38.6
Q ss_pred EEEEEeCCccccccH-------HHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEccCCCcccHHHHHHHHHHHHHHh
Q psy18113 466 FWLFEPSGGLLFPTV-------DYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCSHIDKTDYTAAKVKTFLFRDCN 538 (542)
Q Consensus 466 i~i~r~~g~LfF~na-------~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~~v~~iD~ta~~~l~~l~~~~~ 538 (542)
+.++.++|++.-.+. +.+.+.+++ . .++ + ..+.|||+.. ..+-|.+..+.+.+..+.++
T Consensus 2 i~v~~~~g~i~~~~~~~~~~~~~~l~~~l~~----------a-~~d-~-~v~~ivL~~~-s~Gg~~~~~~~~~~~l~~~~ 67 (211)
T cd07019 2 IGVVFANGAIVDGEETQGNVGGDTTAAQIRD----------A-RLD-P-KVKAIVLRVN-SPGGSVTASEVIRAELAAAR 67 (211)
T ss_pred EEEEEEEEEEeCCCCCCCccCHHHHHHHHHH----------H-hhC-C-CceEEEEEEc-CCCcCHHHHHHHHHHHHHHH
Confidence 455666666554443 456666655 2 122 2 2457999865 47889999888887777776
Q ss_pred hcC
Q psy18113 539 NFY 541 (542)
Q Consensus 539 ~~~ 541 (542)
+.+
T Consensus 68 ~~~ 70 (211)
T cd07019 68 AAG 70 (211)
T ss_pred hCC
Confidence 543
No 59
>PRK12600 putative monovalent cation/H+ antiporter subunit F; Reviewed
Probab=29.19 E-value=91 Score=25.80 Aligned_cols=28 Identities=21% Similarity=0.586 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCC
Q psy18113 291 IFLVPLVGLVANVAIAKAFSEGKIVDAS 318 (542)
Q Consensus 291 ~~~ia~v~~~es~~~~~~~a~~~~~d~n 318 (542)
++.+++++|+.+++.+|-+++|+..+.|
T Consensus 64 alvlAll~Fv~tva~Aryl~~g~~~~~~ 91 (94)
T PRK12600 64 ILLIGILAFIGTAAFSKFIEKGKVIERD 91 (94)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcCC
Confidence 4678999999999999999876654443
No 60
>PF03609 EII-Sor: PTS system sorbose-specific iic component; InterPro: IPR004700 Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the sorbose-specific IIC subunits of this family of PTS transporters.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane
Probab=29.09 E-value=4.2e+02 Score=25.89 Aligned_cols=28 Identities=11% Similarity=0.207 Sum_probs=19.8
Q ss_pred HHhhhhchhhhhcchhHHHHHHHHHHHH
Q psy18113 117 CGLLSLGFVVEFVSLPVVSGFTSSTAII 144 (542)
Q Consensus 117 lg~~rlg~l~~~ip~~V~~Gf~~gigl~ 144 (542)
+|---...+.+.+|+-+..|+..+-|++
T Consensus 162 ~G~~~v~~~~~~iP~~v~~gl~vagg~L 189 (238)
T PF03609_consen 162 FGSDAVQALLNAIPEWVLNGLNVAGGML 189 (238)
T ss_pred cCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3433346688999999988887776653
No 61
>PRK09757 PTS system N-acetylgalactosamine-specific transporter subunit IIC; Provisional
Probab=28.83 E-value=3.2e+02 Score=27.26 Aligned_cols=28 Identities=14% Similarity=0.169 Sum_probs=20.3
Q ss_pred HhhhhchhhhhcchhHHHHHHHHHHHHH
Q psy18113 118 GLLSLGFVVEFVSLPVVSGFTSSTAIIM 145 (542)
Q Consensus 118 g~~rlg~l~~~ip~~V~~Gf~~gigl~i 145 (542)
|---...+.+.+|+-++.|+..+-|++=
T Consensus 163 G~~~v~~~~~~iP~~v~~GL~vaggmLP 190 (267)
T PRK09757 163 AQGAMQALVKAMPAWLTHGFEVAGGILP 190 (267)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 4334567889999999888877766543
No 62
>PF11964 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 This family of proteins is functionally uncharacterised. This protein is found in bacteria and archaea. Proteins in this family are typically between 120 to 132 amino acids in length. This protein has a single completely conserved residue A that may be functionally important. ; PDB: 2Q3L_B 2OOK_A 3BL4_A.
Probab=28.13 E-value=99 Score=25.50 Aligned_cols=55 Identities=13% Similarity=0.070 Sum_probs=38.2
Q ss_pred eEEEEEeCCccccccHHHHHHHHHhhhhhccchhhhhhhcCCCCCeEEEEEcc-CCCcccHHHHHHHHH
Q psy18113 465 EFWLFEPSGGLLFPTVDYLREVVLSKIYEDNNKNKMLHRTRAAGDVYIIINCS-HIDKTDYTAAKVKTF 532 (542)
Q Consensus 465 ~i~i~r~~g~LfF~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vIlD~~-~v~~iD~ta~~~l~~ 532 (542)
++..++++|.+.-...+.+.+.+.+.+ .++ ++..+.+|++ .+.+++..+.....+
T Consensus 1 ~il~v~~~g~~t~ed~~~~~~~~~~~~----------~~~---~~~~ll~d~~~~~~~~~~~a~~~~~~ 56 (109)
T PF11964_consen 1 NILAVRVSGKLTEEDYKELLPALEELI----------ADH---GKIRLLVDLRRDFEGWSPEARWEDAK 56 (109)
T ss_dssp S-EEEEEEEEE-HHHHHHHHHHHHHHH----------TTS---SSEEEEEEEC-CEEEEHHHHHHHHHH
T ss_pred CEEEEEEeeeeCHHHHHHHHHHHHHHH----------hcC---CceEEEEEecCccCCCCHHHHHHHHH
Confidence 367788999988777777777777622 122 2446999999 999999877665553
No 63
>PF07178 TraL: TraL protein; InterPro: IPR009838 This entry represents bacterial TraL proteins. TraL is a predicted peripheral membrane protein involved in bacterial sex pilus assembly []. TraL is part of the type IV secretion system for conjugative plasmid transfer []. The exact function of TraL is unknown.; GO: 0000746 conjugation, 0019867 outer membrane
Probab=26.66 E-value=1.6e+02 Score=24.20 Aligned_cols=44 Identities=25% Similarity=0.243 Sum_probs=27.8
Q ss_pred cCccchHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHhcCCc
Q psy18113 409 TNKRNFLTLVVTFAACLLIGI-EIGLLCGICLDIFNLLHFNARPN 452 (542)
Q Consensus 409 ~~~~d~~v~~~t~~~~l~~~~-~~Gi~~Gi~~s~~~~~~~~~r~~ 452 (542)
.+.+|+.+.++.++..+..+- ..|+++|+++...+-=.+..+++
T Consensus 18 ~~~De~~~~~~~~~~gi~~~~~~~g~i~g~~~~~~~~k~K~~~~~ 62 (95)
T PF07178_consen 18 WPMDEFIPALILFVIGILSGHFLIGLILGIVLWWGYRKFKKGRGR 62 (95)
T ss_pred ecHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHccCCc
Confidence 456788888888777766654 56777777666544434444433
No 64
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism]
Probab=25.61 E-value=1.4e+02 Score=31.42 Aligned_cols=54 Identities=19% Similarity=0.308 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHhh---hhchhhh-hcchhHHHHHHHHHHHHHHHHhhhhhhCcc
Q psy18113 104 AFLTFLTGLVQLTCGLL---SLGFVVE-FVSLPVVSGFTSSTAIIMASSQLKYFLGIQ 157 (542)
Q Consensus 104 ~~~~~l~Gii~~llg~~---rlg~l~~-~ip~~V~~Gf~~gigl~i~~~ql~~~~G~~ 157 (542)
...++...++.+++|.+ |..++-+ .+|+||++|++.++-.....+-...-++++
T Consensus 7 ~~~tl~~a~lllllG~~l~kki~fl~k~~IPepVvgG~i~ail~~~~~~~~~~~~~fd 64 (404)
T COG0786 7 ALETLILAILLLLLGRFLVKKIKFLKKYCIPEPVVGGLIFAILLLLLHGFGGVSLNFD 64 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHccCCcchHHHHHHHHHHHHHHhcceEEEeCC
Confidence 44567777788888876 3444444 689999999999888777655433333333
No 65
>PF02308 MgtC: MgtC family; InterPro: IPR003416 The MgtC protein is found in an operon with the Mg2+ transporter protein MgtB. The function of MgtC and its homologues is not known, but it is thought that MgtC may act as an accessory protein for MgtB, thus mediating magnesium influx into the cytosol. Also included in this family are the Bacillus subtilis SapB protein and several hypothetical proteins.; GO: 0016020 membrane
Probab=25.12 E-value=4.7e+02 Score=22.94 Aligned_cols=47 Identities=17% Similarity=0.292 Sum_probs=26.1
Q ss_pred hhhhHHhhhcCcCc-hhHHHHHHHHHHHHHHHhhHH------HhhhhHHHHHHH
Q psy18113 343 FSRSAVNNASGVQT-TLGGLYTSIIVLLSLSLLTPY------LQYIPQASLAAV 389 (542)
Q Consensus 343 ~srS~~~~~~GarT-~la~i~~a~~~ll~ll~~~~l------l~~iP~~vLa~i 389 (542)
+-|.--+..+|-|| .+.++..++..++...+..+. ...++..+.+++
T Consensus 13 lERe~~~~~aG~RTf~Lv~l~g~l~~~l~~~~~~~~~~~~~~~~rv~~~~v~gi 66 (134)
T PF02308_consen 13 LEREWRGKPAGLRTFALVSLAGALSALLSSEFFLSFPGSNGDPGRVAAGIVSGI 66 (134)
T ss_pred hhcccccCCCCccchHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHH
Confidence 34444446788887 566777666666555444333 234455555553
No 66
>PF05552 TM_helix: Conserved TM helix; InterPro: IPR008910 This alignment represents a conserved transmembrane helix as well as some flanking sequence. It is often found in association with a Mechanosensitive (MS) channel IPR006685 from INTERPRO.; PDB: 2VV5_F 2OAU_E.
Probab=24.94 E-value=1e+02 Score=22.29 Aligned_cols=27 Identities=15% Similarity=0.273 Sum_probs=19.4
Q ss_pred hhHHHhhhhHHHHHHHHHHHHhhhccH
Q psy18113 374 LTPYLQYIPQASLAAVLVCAVLTLVEI 400 (542)
Q Consensus 374 ~~~ll~~iP~~vLa~ili~~~~~li~~ 400 (542)
...+++|+|+-+.|.+++++|+-..++
T Consensus 8 ~~~ii~~lP~iv~AilIl~vG~~va~~ 34 (53)
T PF05552_consen 8 LDQIIAYLPNIVGAILILIVGWWVAKF 34 (53)
T ss_dssp -----GGHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455789999999999999999977653
No 67
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=24.75 E-value=3.6e+02 Score=21.69 Aligned_cols=58 Identities=17% Similarity=0.132 Sum_probs=44.8
Q ss_pred CcH-HHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCCccCCChhHHHHhhhhhHhhhhCCCCCc
Q psy18113 278 LGL-LDMVSHLNTGIFLVPLVGLVANVAIAKAFSEGKIVDASQEMIALGMGNLAGSFINAMPVA 340 (542)
Q Consensus 278 ~~~-~~~~~~l~~~~~~ia~v~~~es~~~~~~~a~~~~~d~n~EL~a~G~aNivs~~fG~~p~~ 340 (542)
.+| +.+..++..+ ++++++..=|.++.+. ++ ..++..-|.+--++.++.++||+.+..
T Consensus 10 y~~k~~~~~D~~aG-ltva~~~iPq~~a~A~-lA---g~pp~~GLy~a~~~~liyalfG~s~~~ 68 (84)
T PF13792_consen 10 YSWKSNLRGDLLAG-LTVALVAIPQGMAYAL-LA---GVPPIYGLYAAIIPPLIYALFGSSRHM 68 (84)
T ss_pred CChHHHHHHHHHHH-HHHHHHHHHHHHHHHH-Hc---CCCCCeeeHHHHHHHHHHhhccCCCcc
Confidence 356 6667777655 6788888888887775 33 267788899999999999999998755
No 68
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=24.66 E-value=6.2e+02 Score=28.58 Aligned_cols=89 Identities=25% Similarity=0.293 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHHHHHHhhHHH--hhhhHHHHHHHHHHHHhhhccHHHHHHhhccCccchHHHHHHHHHHHHHhhHHHHH
Q psy18113 357 TLGGLYTSIIVLLSLSLLTPYL--QYIPQASLAAVLVCAVLTLVEIEIMAVLWKTNKRNFLTLVVTFAACLLIGIEIGLL 434 (542)
Q Consensus 357 ~la~i~~a~~~ll~ll~~~~ll--~~iP~~vLa~ili~~~~~li~~~~~~~l~~~~~~d~~v~~~t~~~~l~~~~~~Gi~ 434 (542)
+.++++.+++-+..-..+..+. ..+|...-.+.+-.+.+... +...+.++.+.....+.+....+..+...+.
T Consensus 51 ~~~A~l~aiLyl~~py~l~~~y~rgni~e~lA~~llPlvll~~~-----~~~~~~~~r~~~~lAl~~all~lsHll~~ll 125 (616)
T PF10131_consen 51 RKAAILAAILYLFSPYHLRNIYWRGNIPETLAFALLPLVLLFLY-----RFIKKRKYRYWILLALSMALLALSHLLSTLL 125 (616)
T ss_pred hhHHHHHHHHHHHhHHHHHHHHhcchHHHHHHHHHHHHHHHHHH-----HHHhcCCchhHHHHHHHHHHHHHHhHHHHHH
Confidence 6777777766655544433322 35555544333333332222 1111223344444444444455556667777
Q ss_pred HHHHHHHHHHHHHhcC
Q psy18113 435 CGICLDIFNLLHFNAR 450 (542)
Q Consensus 435 ~Gi~~s~~~~~~~~~r 450 (542)
.++++..+.++++..+
T Consensus 126 ~~l~~~~~lLi~~~~~ 141 (616)
T PF10131_consen 126 TGLALIVFLLIYLIQR 141 (616)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 7777666666555443
No 69
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=23.80 E-value=1.3e+02 Score=31.49 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhh---hhchhhh-hcchhHHHHHHHHHHH
Q psy18113 107 TFLTGLVQLTCGLL---SLGFVVE-FVSLPVVSGFTSSTAI 143 (542)
Q Consensus 107 ~~l~Gii~~llg~~---rlg~l~~-~ip~~V~~Gf~~gigl 143 (542)
++....+++++|.+ |...+-| ++|.||+.|++..+-.
T Consensus 8 tl~la~ilLliG~~Lr~ki~~lqk~~IPasvIgGli~~il~ 48 (368)
T PF03616_consen 8 TLALASILLLIGKFLRAKIPFLQKLFIPASVIGGLIFAILP 48 (368)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHccCCchHHHHHHHHHHH
Confidence 44555566667665 3455555 7899999999965553
No 70
>PRK10692 hypothetical protein; Provisional
Probab=22.99 E-value=2.9e+02 Score=22.43 Aligned_cols=31 Identities=26% Similarity=0.499 Sum_probs=21.4
Q ss_pred hhhhhHhHHHHHHHHHHHHHHHHHHHHHhCCCc
Q psy18113 24 VNAAVSDVLAGITVGLTLIPQAIAYASLAGLNP 56 (542)
Q Consensus 24 ~~~l~~Di~aGi~~~~~~iP~~~aya~lag~pp 56 (542)
...+.++++-|+ +++.+--+++|.+++.+|.
T Consensus 5 ~a~~~GN~lMgl--Gmv~Mv~gigysi~~~i~~ 35 (92)
T PRK10692 5 NASLLGNVLMGL--GLVVMVVGVGYSILNQLPQ 35 (92)
T ss_pred hhHHHhhHHHHH--HHHHHHHHHHHHHHHhccc
Confidence 445566777665 5555667899999987664
No 71
>PRK15065 PTS system mannose-specific transporter subunit IIC; Provisional
Probab=22.93 E-value=5.3e+02 Score=25.66 Aligned_cols=27 Identities=11% Similarity=0.236 Sum_probs=20.4
Q ss_pred HhhhhchhhhhcchhHHHHHHHHHHHH
Q psy18113 118 GLLSLGFVVEFVSLPVVSGFTSSTAII 144 (542)
Q Consensus 118 g~~rlg~l~~~ip~~V~~Gf~~gigl~ 144 (542)
|---...+.+.+|+-++.|+..+-|++
T Consensus 163 G~~~v~~~~~~iP~~v~~GL~vaggmL 189 (262)
T PRK15065 163 GTSAVQSMLNAIPEVLTGGLNIGGGMI 189 (262)
T ss_pred CHHHHHHHHHHCHHHHHHHHHHHHhhH
Confidence 443456789999999999888776654
No 72
>COG4392 Predicted membrane protein [Function unknown]
Probab=22.32 E-value=4.8e+02 Score=22.15 Aligned_cols=62 Identities=23% Similarity=0.357 Sum_probs=34.0
Q ss_pred HHHhhhhHHHHHHHHHHHHhhhccHHHHHHhhccCccchHHHHHHHHHHHH-HhhHHHHHHHHHHHH
Q psy18113 376 PYLQYIPQASLAAVLVCAVLTLVEIEIMAVLWKTNKRNFLTLVVTFAACLL-IGIEIGLLCGICLDI 441 (542)
Q Consensus 376 ~ll~~iP~~vLa~ili~~~~~li~~~~~~~l~~~~~~d~~v~~~t~~~~l~-~~~~~Gi~~Gi~~s~ 441 (542)
.+++|+|.++++|+.+-..+ .+......-|+.+ ...-.++|.+.... =++...+++|++.-.
T Consensus 39 ~~L~fvP~a~ltAL~~p~vl--~~~~g~~~s~~~p--~llA~lvav~la~lTrnll~~il~Gm~~~~ 101 (107)
T COG4392 39 RFLSFVPVAILTALIAPDVL--MPHGGLDPSWNNP--YLLAGLVAVALAILTRNLLATILVGMASFA 101 (107)
T ss_pred HHHhhccHHHHHHHHhhhHh--ccCCCcchhhccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999997654322 1111111222221 12233444444443 388888888887644
No 73
>COG1279 Lysine efflux permease [General function prediction only]
Probab=20.84 E-value=3.2e+02 Score=25.98 Aligned_cols=74 Identities=12% Similarity=0.170 Sum_probs=53.7
Q ss_pred CCccccchhHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHhhhhchhhhhcchhHHHHHHHHHHHHHHHHhhh
Q psy18113 76 TKQLSVGPTSIMALLCLTYTHDTSLEMVAFLTFLTGLVQLTCGLLSLGFVVEFVSLPVVSGFTSSTAIIMASSQLK 151 (542)
Q Consensus 76 s~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~l~Gii~~llg~~rlg~l~~~ip~~V~~Gf~~gigl~i~~~ql~ 151 (542)
+--..+||..+.. ..+...+...-....++.++=.+++.+|+++.|.++.-.|.-...=...|+++++..+...
T Consensus 14 ~LI~pIGaQNaFV--l~QGi~r~~~l~~~~~c~i~D~~Li~~gv~G~~~li~~~p~l~~i~~~~G~~FLl~yg~~a 87 (202)
T COG1279 14 SLILPIGAQNAFV--LNQGIRREYVLPIALLCAISDIVLISAGVFGVGALIAKSPWLLLIVRWGGAAFLLYYGLLA 87 (202)
T ss_pred HHHHhccchhHHH--HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556665542 3333333333346667788888999999999999999999999988899999888877654
No 74
>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function.
Probab=20.50 E-value=5.5e+02 Score=24.86 Aligned_cols=80 Identities=14% Similarity=0.161 Sum_probs=43.7
Q ss_pred CchhHHHHHHHHHHHHHHHhhHHHhhhhHHHHHHHHHHHHhhhccHHHHHHhhcc--CccchHHHHHHHHHHHHHhhHHH
Q psy18113 355 QTTLGGLYTSIIVLLSLSLLTPYLQYIPQASLAAVLVCAVLTLVEIEIMAVLWKT--NKRNFLTLVVTFAACLLIGIEIG 432 (542)
Q Consensus 355 rT~la~i~~a~~~ll~ll~~~~ll~~iP~~vLa~ili~~~~~li~~~~~~~l~~~--~~~d~~v~~~t~~~~l~~~~~~G 432 (542)
+++...+..|+..+++++ +|-++++.+|.+++++-.+..+++. ++.+..--..+++--++.++.+-
T Consensus 144 ~k~~k~~~~gi~aml~Vf------------~LF~lvmt~g~d~m~fl~v~~ly~~ia~~ik~se~~~~~lwyi~Y~vPY~ 211 (230)
T PF03904_consen 144 QKRQKSMYKGIGAMLFVF------------MLFALVMTIGSDFMDFLHVDHLYKAIASKIKASESFWTYLWYIAYLVPYI 211 (230)
T ss_pred HHHHHHHHHhHHHHHHHH------------HHHHHHHHhcccchhhhhHHHHHHHHHHHHhhhHhHHHHHHHHHHhhHHH
Confidence 456666666665554442 3445566777777777665555432 22222222334444555566776
Q ss_pred HHHHHHHHHHHHHH
Q psy18113 433 LLCGICLDIFNLLH 446 (542)
Q Consensus 433 i~~Gi~~s~~~~~~ 446 (542)
+.+|..+.+.-.++
T Consensus 212 ~~ig~~i~l~~~~~ 225 (230)
T PF03904_consen 212 FAIGLFIYLYEWIR 225 (230)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666665554444
No 75
>KOG0236|consensus
Probab=20.47 E-value=1.3e+03 Score=26.33 Aligned_cols=119 Identities=15% Similarity=0.172 Sum_probs=68.8
Q ss_pred ccCCCCC--hhhhhHh-HHHHHHHHHHHHHHHHHHHHH-h---C--CCcchhhHHhHHHHHHHhhhcCCCccccchhHHH
Q psy18113 17 AWLPKYN--VNAAVSD-VLAGITVGLTLIPQAIAYASL-A---G--LNPKYGLYSSIFGGVMYIFLGTTKQLSVGPTSIM 87 (542)
Q Consensus 17 ~wl~~y~--~~~l~~D-i~aGi~~~~~~iP~~~aya~l-a---g--~pp~~gl~~~~~~~ii~~lfgss~~~~~Gp~~~~ 87 (542)
+|++.++ +.+...+ ...++.++++++-..++.+.. | + +++-.=|++-.+..++-++|+.-|. .|..+=.
T Consensus 313 ~g~~~~~lp~~~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~y~vd~nqELiAlG~~Ni~sSff~~~p~--tgs~sRS 390 (665)
T KOG0236|consen 313 RGFPPPSLPPLSLTPQVIPDAFAIAIVALLEHIAIGKSFASLHGYKVDSNQELIALGISNILSSFFGCYPT--TGSFSRS 390 (665)
T ss_pred CCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeCCChHHHHHHHHHHhhhhhceEcc--cchhhHH
Confidence 5666665 2233333 333677777777767776643 3 2 4555568999999999999987443 2333222
Q ss_pred HHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHhhhhchhhhhcchhHHHHHHHHHHHH
Q psy18113 88 ALLCLTYTHDTSLEMVAFLTFLTGLVQLTCGLLSLGFVVEFVSLPVVSGFTSSTAII 144 (542)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~Gii~~llg~~rlg~l~~~ip~~V~~Gf~~gigl~ 144 (542)
++-..+ |-. .....+++|++ .++.+.-++.+..|+|..++...+-.++..
T Consensus 391 av~~~s-----G~~-T~~s~i~~~~~-vl~~l~~l~p~f~~iP~~vLaaIIi~a~~~ 440 (665)
T KOG0236|consen 391 AVNIKS-----GGR-TQVAGIVSAAL-VLLALLFLGPLFYYIPKCVLAAIIISALIG 440 (665)
T ss_pred HHHhhc-----CCc-chHHHHHHHHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHhhH
Confidence 221111 111 11222233322 333444578899999999999988877765
No 76
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=20.00 E-value=3.4e+02 Score=21.94 Aligned_cols=29 Identities=24% Similarity=0.526 Sum_probs=20.0
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHHHhCCC
Q psy18113 25 NAAVSDVLAGITVGLTLIPQAIAYASLAGLN 55 (542)
Q Consensus 25 ~~l~~Di~aGi~~~~~~iP~~~aya~lag~p 55 (542)
..+.++++-|+ +++.+--+++|++++.+|
T Consensus 6 a~~~GN~lMgl--Gmv~Mv~gigysi~~~~~ 34 (89)
T PF10762_consen 6 AFLLGNVLMGL--GMVVMVGGIGYSILSQIP 34 (89)
T ss_pred hHHHhhHHHHH--hHHHHHHhHHHHHHHhcc
Confidence 34456666665 556666799999998665
Done!