BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18114
(359 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P75821|YBJS_ECOLI Uncharacterized protein YbjS OS=Escherichia coli (strain K12)
GN=ybjS PE=4 SV=2
Length = 337
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 28/247 (11%)
Query: 8 VVILGGCGFVGRNLVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLIHP 67
V++ G +GRN VE L + +S NE K+ ++ EF+ +L
Sbjct: 3 VLVTGATSGLGRNAVEFLCQKG-------ISVRATGRNEAMGKLLEKMGAEFVPADLTEL 55
Query: 68 STCELIFLNSADNSDLTWEYVINCAAETRPGQAEEIYREGIYKLSINCATAAARYGILKY 127
+ + + + D W +C++ T P ++ + + + A +G+ +
Sbjct: 56 VSSQAKVMLAG--IDTLW----HCSSFTSPWGTQQAFDLANVRATRRLGEWAVAWGVRNF 109
Query: 128 VEISSGEICTSHKH--SCKESDEPQPWST-IAKYKCQVEKALLEI----PGLNYTIVRPG 180
+ ISS + + H KE P ++ A+ K E+ + + P +TI+RP
Sbjct: 110 IHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMLSQANPQTRFTILRPQ 169
Query: 181 VVYGKSDRHNLAPRLVMCAIYQYLGETLQLFGGKSLPLNTVHVADLSRAIWHLLSE---- 236
++G D+ PRL + + G L GG +L ++ + + A+W E
Sbjct: 170 SLFGPHDK-VFIPRL--AHMMHHYGSILLPHGGSAL-VDMTYYENAVHAMWLASQEACDK 225
Query: 237 LPPAKVY 243
LP +VY
Sbjct: 226 LPSGRVY 232
>sp|Q29RI9|MAT2B_BOVIN Methionine adenosyltransferase 2 subunit beta OS=Bos taurus
GN=MAT2B PE=2 SV=1
Length = 334
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 109/279 (39%), Gaps = 32/279 (11%)
Query: 8 VVILGGCGFVGRNLVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLIHP 67
V+I G G +GR + + +N+ V F+R +F NL+
Sbjct: 31 VLITGATGLLGRAVYKEFQQNNWHAV---------------GCGFRRARPKFEQVNLLDS 75
Query: 68 STCELIFLNSADNSDLTWEYVINCAAETRPGQAEEIYREGIYKLSI----NCATAAARYG 123
+ I D +++CAAE RP E + + +L++ N A AA G
Sbjct: 76 NAVHHIIY------DFQPHVIVHCAAERRPDVVEN-HPDAASQLNVDASGNLAKEAAAIG 128
Query: 124 ILKYVEISSGEICTSHKHSCKESDEPQPWSTIAKYKCQVEKALLEIPGLNYTIVRPGVVY 183
+ ISS + +E D P P + K K + EKA+LE L ++R V+Y
Sbjct: 129 AF-LIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLE-NNLGAAVLRIPVLY 186
Query: 184 GKSDRHNLAPRLVMCAIYQYLGETLQL-FGGKSLPLNTVHVADLSRAIWHLLSELPPAKV 242
G+ +R + +M Q+ ++ + + P HV D++ L +
Sbjct: 187 GEVERLEESAVTIMFDKVQFSNKSANMDHWQQRFP---THVKDVATVCRQLAEKRMLDPS 243
Query: 243 YREIYHVVDMGNTCQEDLMSTLTDIFGVKHDYVGSVTAS 281
+ +H + ++ + D F + ++ +T S
Sbjct: 244 IKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDS 282
>sp|Q8X7P7|GNE_ECO57 UDP-N-acetylglucosamine 4-epimerase OS=Escherichia coli O157:H7
GN=gne PE=3 SV=1
Length = 331
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 43/254 (16%)
Query: 8 VVILGGCGFVGRNLVEHLVENDLLRVIDK----VSPEIAWLNEKQKKIFKRPLVEFISGN 63
V+++G GFVG L+E + + ++ +DK PEI + + + ++ L + ++G
Sbjct: 5 VLLIGASGFVGTRLLETAIADFNIKNLDKQQSHFYPEITQIGDVRD---QQALDQALAG- 60
Query: 64 LIHPSTCELIFLNSADNSDLTWEYVINCAAETRPGQA-EEIYREGIYKLSINCATAAARY 122
++ V+ AAE R + +Y + + + N A +
Sbjct: 61 ---------------------FDTVVLLAAEHRDDVSPTSLYYDVNVQGTRNVLAAMEKN 99
Query: 123 GILKYVEISSGEICTSHKHSCKESDEPQPWSTIAKYKCQVEKALLEIPG-----LNYTIV 177
G+ + SS + +KH+ E+ P++ K K Q E+ L E + TI+
Sbjct: 100 GVKNIIFTSSVAVYGLNKHNPDENHPHDPFNHYGKSKWQAEEVLREWYNKAPTERSLTII 159
Query: 178 RPGVVYGKSDRHNLAPRLVMCAIYQYLGETLQLFGGKSLPLNTVHVADLSRAIWHLLSEL 237
RP V++G+ +R N V + Q G + G + + +V ++ I + L +
Sbjct: 160 RPTVIFGERNRGN-----VYNLLKQIAGGKFMMVGAGTNYKSMAYVGNIVEFIKYKLKNV 214
Query: 238 PPAKVYREIYHVVD 251
E+Y+ VD
Sbjct: 215 AAG---YEVYNYVD 225
>sp|Q331Q7|GERKI_STRSQ dTDP-4-dehydro-6-deoxyglucose reductase OS=Streptomyces sp.
GN=gerKI PE=1 SV=1
Length = 326
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 101/250 (40%), Gaps = 39/250 (15%)
Query: 8 VVILGGCGFVGRNLVEHLVEN--DLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLI 65
V++ G GF+G + V L ++L + PEI Q ++ V + L
Sbjct: 11 VLVTGALGFIGSHFVRQLDARGAEVLALYRTERPEI------QAELAALNRVRLVRTELR 64
Query: 66 HPSTCELIFLNSADNSDLTWEYVINCAAETRPGQ-----AEEIYREGIYKLS--INCATA 118
S F A + D V++CAA Q + EI +S +NC
Sbjct: 65 DESDVRGAFKYLAPSIDT----VVHCAAMDGNAQFKLERSAEILDSNQRTISNLLNCVRD 120
Query: 119 AARYGILKYVEISSGEI-CTSHKHSCKESDEPQPWSTIAKYKCQVEKALLEIP------- 170
+G+ + V +SS E+ S + +E D+ + + K EI
Sbjct: 121 ---FGVGEVVVMSSSELYSASPTVAAREEDDFRRSMRYTDNGYVLSKTYGEILARLHREQ 177
Query: 171 -GLNYTIVRPGVVYGKSD-----RHNLAPRLVMCAIYQYLGETLQLFGGKSLPLNTVHVA 224
G N +VRPG VYG D R + P ++ A GE ++++G S + VHVA
Sbjct: 178 FGTNVFLVRPGNVYGPGDGFDCSRGRVIPSMLAKA---DAGEEIEIWGDGSQTRSFVHVA 234
Query: 225 DLSRAIWHLL 234
DL RA LL
Sbjct: 235 DLVRASLRLL 244
>sp|Q56623|GALE_VIBCL UDP-glucose 4-epimerase OS=Vibrio cholerae GN=galE PE=3 SV=1
Length = 328
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 31/216 (14%)
Query: 7 AVVILGGCGFVGRNLVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLIH 66
++++ G GFVG NLV+ L V V + + K + F G++
Sbjct: 11 SILLTGSTGFVGTNLVKSLTLKSDYIVKSAV----------RHAVNKDDGLLFEVGDINA 60
Query: 67 PSTCELIFLNSADNSDLTWEYVINCAA-----ETRPGQAEEIYREGIYKLSINCATAAAR 121
+ EL N+ V++CAA + + + +YRE ++N A A
Sbjct: 61 STDFELPLKNTT--------VVVHCAARAHVMDDKEAEPLTLYREVNTAGTVNLAKQAID 112
Query: 122 YGILKYVEISSGEI---CTSHKHSCKESDEPQPWSTIAKYKCQVEKALLEIP---GLNYT 175
G+ +++ ISS ++ T K D P K + EK L+ + +
Sbjct: 113 SGVKRFIFISSIKVNGEGTLVGCPFKTEDNHAPEDDYGLSKSEAEKQLVALAKDSSMEVV 172
Query: 176 IVRPGVVYGKSDRHNLAP--RLVMCAIYQYLGETLQ 209
I+RP +VYG + N A RLV I G Q
Sbjct: 173 IIRPTIVYGPGVKANFASLMRLVSKGIPLPFGSITQ 208
>sp|Q9FX01|HSDD1_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1
OS=Arabidopsis thaliana GN=3BETAHSD/D1 PE=2 SV=1
Length = 439
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 42/214 (19%)
Query: 9 VILGGCGFVGRNLVEHLVENDLLRV-IDKVSPEIAWLNEKQKKIFKRPL----VEFISGN 63
V+ GG GF R+LVE LV + V I ++P I ++ I + V+++S +
Sbjct: 13 VVTGGRGFAARHLVEMLVRYQMFHVRIADLAPAIVLNPHEETGILGEAIRSGRVQYVSAD 72
Query: 64 LIHPST-------CELIFLNSADNSDLT---WEYVINCAAETRPGQAEEIYREGIYKLSI 113
L + + E++F +A +S + +Y +N T
Sbjct: 73 LRNKTQVVKGFQGAEVVFHMAAPDSSINNHQLQYSVNVQGTT------------------ 114
Query: 114 NCATAAARYGILKYVEISSGEICTSHKHSCKESDEPQPW-----STIAKYKCQVEKALLE 168
N A G+ + + SS + H +DE P+ + + K + E +L+
Sbjct: 115 NVIDACIEVGVKRLIYTSSPSVVFDGVHGTLNADESLPYPPKHNDSYSATKAEGEALILK 174
Query: 169 I---PGLNYTIVRPGVVYGKSDRHNLAPRLVMCA 199
GL +RP ++G D+ + P LV A
Sbjct: 175 ANGRSGLLTCCIRPSSIFGPGDKL-MVPSLVTAA 207
>sp|Q5R4E0|MAT2B_PONAB Methionine adenosyltransferase 2 subunit beta OS=Pongo abelii
GN=MAT2B PE=2 SV=1
Length = 334
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 107/279 (38%), Gaps = 32/279 (11%)
Query: 8 VVILGGCGFVGRNLVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLIHP 67
V++ G G +GR + + +N+ V F+R +F NL+
Sbjct: 31 VLVTGATGLLGRAVHKEFQQNNWHAV---------------GCGFRRARPKFEQVNLLDS 75
Query: 68 STCELIFLNSADNSDLTWEYVINCAAETRPGQAEEIYREGIYKLSI----NCATAAARYG 123
+ I D +++CAAE RP E + +L++ N A AA G
Sbjct: 76 NAVHHII------HDFQPHVIVHCAAERRPDVVEN-QPDAASQLNVDASGNLAKEAAAVG 128
Query: 124 ILKYVEISSGEICTSHKHSCKESDEPQPWSTIAKYKCQVEKALLEIPGLNYTIVRPGVVY 183
+ ISS + +E D P P + K K EKA+LE L ++R ++Y
Sbjct: 129 AF-LIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLE-NNLGAAVLRIPILY 186
Query: 184 GKSDRHNLAPRLVMCAIYQYLGETLQL-FGGKSLPLNTVHVADLSRAIWHLLSELPPAKV 242
G+ ++ + VM Q+ ++ + + P HV D++ L +
Sbjct: 187 GEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFP---THVKDVATVCRQLAEKRMLDPS 243
Query: 243 YREIYHVVDMGNTCQEDLMSTLTDIFGVKHDYVGSVTAS 281
+ +H + ++ + D F + ++ +T S
Sbjct: 244 IKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDS 282
>sp|Q9NZL9|MAT2B_HUMAN Methionine adenosyltransferase 2 subunit beta OS=Homo sapiens
GN=MAT2B PE=1 SV=1
Length = 334
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 107/279 (38%), Gaps = 32/279 (11%)
Query: 8 VVILGGCGFVGRNLVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLIHP 67
V++ G G +GR + + +N+ V F+R +F NL+
Sbjct: 31 VLVTGATGLLGRAVHKEFQQNNWHAV---------------GCGFRRARPKFEQVNLLDS 75
Query: 68 STCELIFLNSADNSDLTWEYVINCAAETRPGQAEEIYREGIYKLSI----NCATAAARYG 123
+ I D +++CAAE RP E + +L++ N A AA G
Sbjct: 76 NAVHHII------HDFQPHVIVHCAAERRPDVVEN-QPDAASQLNVDASGNLAKEAAAVG 128
Query: 124 ILKYVEISSGEICTSHKHSCKESDEPQPWSTIAKYKCQVEKALLEIPGLNYTIVRPGVVY 183
+ ISS + +E D P P + K K EKA+LE L ++R ++Y
Sbjct: 129 AF-LIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLE-NNLGAAVLRIPILY 186
Query: 184 GKSDRHNLAPRLVMCAIYQYLGETLQL-FGGKSLPLNTVHVADLSRAIWHLLSELPPAKV 242
G+ ++ + VM Q+ ++ + + P HV D++ L +
Sbjct: 187 GEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFP---THVKDVATVCRQLAEKRMLDPS 243
Query: 243 YREIYHVVDMGNTCQEDLMSTLTDIFGVKHDYVGSVTAS 281
+ +H + ++ + D F + ++ +T S
Sbjct: 244 IKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDS 282
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 35/237 (14%)
Query: 8 VVILGGCGFVGRNLVEHLVENDL-LRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLIH 66
+++ GG GF+G ++V+ L+EN+ + ++D ++ K P EF++ ++
Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNYDVIILDNLTT--------GNKNNINPKAEFVNADIRD 53
Query: 67 PSTCELIFLNSADNSDLTWEYVINCAAE--TRPGQAEEIYREGIYKL-SINCATAAARYG 123
E I E VI+ AA+ R +Y I L +IN +Y
Sbjct: 54 KDLDEKINFKDV-------EVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYD 106
Query: 124 ILKYVEISSGEICTSHKHSCKESDEPQPWSTIAKYKC------QVEKALLEIPGLNYTIV 177
I K V SSG + DE P + ++ Y + K + G+ Y I+
Sbjct: 107 IDKIVFASSGGAVYGEPNYLP-VDENHPINPLSPYGLSKYVGEEYIKLYNRLYGIEYAIL 165
Query: 178 RPGVVYGKSDRHNLAPRLVMCAIYQYLGETLQ-----LFGGKSLPLNTVHVADLSRA 229
R VYG+ P+ I ++ + L+ +FG + + V+V D+++A
Sbjct: 166 RYSNVYGERQ----DPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDVAKA 218
>sp|Q99LB6|MAT2B_MOUSE Methionine adenosyltransferase 2 subunit beta OS=Mus musculus
GN=Mat2b PE=2 SV=1
Length = 334
Score = 38.9 bits (89), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 11/205 (5%)
Query: 82 DLTWEYVINCAAETRPGQAEEIYREGIYKLSI----NCATAAARYGILKYVEISSGEICT 137
D +++CAAE RP E + +L++ N A AA G + ISS +
Sbjct: 84 DFQPHVIVHCAAERRPDVVES-QPDAASQLNVGASGNLAKEAAAIGAF-LIYISSDYVFD 141
Query: 138 SHKHSCKESDEPQPWSTIAKYKCQVEKALLEIPGLNYTIVRPGVVYGKSDRHNLAPRLVM 197
E D P P + K K EKA+LE L ++R V+YG+ ++ + VM
Sbjct: 142 GTNPPYTEEDIPSPLNLYGKTKLDGEKAVLE-NNLGAAVLRIPVLYGEVEKLEESAVTVM 200
Query: 198 CAIYQYLGETLQL-FGGKSLPLNTVHVADLSRAIWHLLSELPPAKVYREIYHVVDMGNTC 256
Q+ ++ + + P HV D++ L + + +H
Sbjct: 201 FDKVQFSNKSANMDHWQQRFP---THVKDVASVCRQLAEKRMLDPSIKGTFHWSGNEQMT 257
Query: 257 QEDLMSTLTDIFGVKHDYVGSVTAS 281
+ ++ + D F + ++ +T S
Sbjct: 258 KYEMACAIADAFNLPSSHLRPITDS 282
>sp|Q3U487|HECD3_MOUSE E3 ubiquitin-protein ligase HECTD3 OS=Mus musculus GN=Hectd3 PE=1
SV=2
Length = 861
Score = 38.9 bits (89), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 194 RLVMCAIYQYLGETLQLFGGKSLP-LNTVHVADLSRAIWHLLSELP-PAKVYRE-----I 246
RLV +L QLFG P L V DL+ + H L P PA+ Y E +
Sbjct: 151 RLVPIDTPDHLQRQQQLFGVDYRPVLRWEQVVDLTYS--HRLGSRPQPAEAYTEAIQRLL 208
Query: 247 YHVVDMGNTCQEDLMSTLTDIFGVKHDYVGSVTASLCQLDLVGLTEEINDKHLT 300
Y C EDL+ L D G + + +GSV + +D+ TEE N LT
Sbjct: 209 YVPPTWTYECDEDLIHFLYDHLGKEDENLGSVKQYVESIDVSSYTEEFNVSCLT 262
>sp|Q5U2R0|MAT2B_RAT Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus
GN=Mat2b PE=2 SV=1
Length = 334
Score = 38.9 bits (89), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 11/205 (5%)
Query: 82 DLTWEYVINCAAETRPGQAEEIYREGIYKLSI----NCATAAARYGILKYVEISSGEICT 137
D +++CAAE RP E + +L++ N A AA G + ISS +
Sbjct: 84 DFQPHVIVHCAAERRPDVVES-QPDAASQLNVGASGNLAKEAAAIGAF-LIYISSDYVFD 141
Query: 138 SHKHSCKESDEPQPWSTIAKYKCQVEKALLEIPGLNYTIVRPGVVYGKSDRHNLAPRLVM 197
E D P P + K K EKA+LE L ++R V+YG+ ++ + VM
Sbjct: 142 GTNPPYTEEDIPSPLNLYGKTKLDGEKAVLE-NNLGAAVLRIPVLYGEVEKLEESAVTVM 200
Query: 198 CAIYQYLGETLQL-FGGKSLPLNTVHVADLSRAIWHLLSELPPAKVYREIYHVVDMGNTC 256
Q+ ++ + + P HV D++ L + + +H
Sbjct: 201 FDKVQFSNKSANMDHWQQRFP---THVKDVASVCRQLAEKRMLDPSIKGTFHWSGNEQMT 257
Query: 257 QEDLMSTLTDIFGVKHDYVGSVTAS 281
+ ++ + D F + ++ +T S
Sbjct: 258 KYEMACAIADAFNLPSSHLRPITDS 282
>sp|Q5T447|HECD3_HUMAN E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens GN=HECTD3 PE=1
SV=1
Length = 861
Score = 38.5 bits (88), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 194 RLVMCAIYQYLGETLQLFGGKSLP-LNTVHVADLSRAIWHLLSELP-PAKVYRE-----I 246
RLV +L QLFG P L V DL+ + H L P PA+ Y E +
Sbjct: 151 RLVPIDTPNHLQRQQQLFGVDYRPVLRWEQVVDLTYS--HRLGSRPQPAEAYAEAVQRLL 208
Query: 247 YHVVDMGNTCQEDLMSTLTDIFGVKHDYVGSVTASLCQLDLVGLTEEINDKHLT 300
Y C EDL+ L D G + + +GSV + +D+ TEE N LT
Sbjct: 209 YVPPTWTYECDEDLIHFLYDHLGKEDENLGSVKQYVESIDVSSYTEEFNVSCLT 262
>sp|Q5BJJ6|MAT2B_DANRE Methionine adenosyltransferase 2 subunit beta OS=Danio rerio
GN=mat2b PE=2 SV=1
Length = 323
Score = 38.1 bits (87), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 83/195 (42%), Gaps = 9/195 (4%)
Query: 88 VINCAAETRPGQAEEIYREGIYKLSIN-CATAAARYGILKYVEISSGEICTSHKHSCKES 146
+++CAAE RP E + E L+++ CAT A G + IS+ + E+
Sbjct: 79 IVHCAAERRPDVVER-HTEAAMNLNVHACATLAKEAGGSFLIYISTDYVFDGRNPPYGEN 137
Query: 147 DEPQPWSTIAKYKCQVEKALLE-IPGLNYTIVRPGVVYGKSDRHNLAPRLVMCAIYQYLG 205
D P P + K K + E+ +L PG ++R +++G+ ++ + V+ Q
Sbjct: 138 DAPNPLNLYGKSKLEGEREILRHCPGA--AVLRVPILFGEVEKVEESAVTVLFERVQEGA 195
Query: 206 ETLQL-FGGKSLPLNTVHVADLSRAIWHLLSELPPAKVYREIYHVVDMGNTCQEDLMSTL 264
E+ + + P + D++R ++ + R I+H + ++ +
Sbjct: 196 ESCTIDHCQQRFP---TYTNDVARVCRNMAERALQDQSLRGIFHYSAKEQMTKYEMTCAI 252
Query: 265 TDIFGVKHDYVGSVT 279
D F + ++ +T
Sbjct: 253 ADAFNLPSSHLIPMT 267
>sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2
Length = 564
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 111/281 (39%), Gaps = 34/281 (12%)
Query: 9 VILGGCGFVGRNLVEHLVENDLLRV-IDKVSPEIAWLNEKQKKIFKRPL----VEFISGN 63
V+ GG GF R+LVE LV ++ V I ++P I ++ + L V++IS +
Sbjct: 13 VVTGGRGFAARHLVEMLVRYEMFCVRIADLAPAIMLDPQEGNGVLDEGLRSGRVQYISAD 72
Query: 64 LIHPSTCELIFLNSADNSDLTWEYVINCAAETRPGQAEEIYREGIYKLSINCATAAARYG 123
L S F + E V + AA ++ + + N A G
Sbjct: 73 LRDKSQVVKAFQGA--------EVVFHMAAPDSSINNHQLQYSVNVQGTQNVIDACVDVG 124
Query: 124 ILKYVEISSGEICTSHKHSCKESDEPQPW-----STIAKYKCQVEKALLEIPGLNYTI-- 176
+ + + SS + H E + + + K + E+ +++ G N +
Sbjct: 125 VKRLIYTSSPSVVFDGVHGILNGTESMAYPIKHNDSYSATKAEGEELIMKANGRNGLLTC 184
Query: 177 -VRPGVVYGKSDRHNLAPRLVMCAIYQYLGETLQLFGGKSLPLNTVHVADLSRAIWHLLS 235
+RP ++G DR L P LV A G++ + G + + +V +++ A H+ +
Sbjct: 185 CIRPSSIFGPGDRL-LVPSLVAAA---RAGKSKFIIGDGNNLYDFTYVENVAHA--HVCA 238
Query: 236 ELPPA-------KVYREIYHVVDMGNTCQEDLMSTLTDIFG 269
E A K + Y + +M + MS L D G
Sbjct: 239 ERALASGGDVSTKAAGQAYFITNMEPIKFWEFMSQLLDGLG 279
>sp|P37761|RMLB_NEIGO dTDP-glucose 4,6-dehydratase OS=Neisseria gonorrhoeae GN=rfbB PE=3
SV=1
Length = 346
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 101/254 (39%), Gaps = 28/254 (11%)
Query: 2 SQNKPAVVILGGCGFVGRNLVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFIS 61
++ K +++ GG GF+G +V H+++N V++ A E I P F
Sbjct: 3 TEGKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQ 62
Query: 62 GNLIHPSTCELIFLNSADNSDLTWEYVINCAAETRP----GQAEEIYREGIYKLSINCAT 117
++ + + +F ++ V++ AAE+ G A E R I + +
Sbjct: 63 VDICDRAELDRVFAQYRPDA------VMHLAAESHVDRAIGSAGEFIRTNIVG-TFDLLE 115
Query: 118 AAARY---------GILKYVEISSGEICTSHKHSCKESDEPQPWSTIAKYKCQVEKALLE 168
AA Y ++ IS+ E+ + E P++ + Y A
Sbjct: 116 AARAYWQQMPSEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHL 175
Query: 169 IPGLNYTIVRPGVVYGKSDRHNLAPR-----LVMCAIYQYL-GETLQLFGGKSLPLNTVH 222
+ T P +V S+ N PR L+ I L G+ L ++G + + +
Sbjct: 176 VRAWQRTYRLPSIVSNCSN--NYGPRQFPEKLIPLMILNALSGKPLPVYGDGAQIRDWLF 233
Query: 223 VADLSRAIWHLLSE 236
V D +RA++ +++E
Sbjct: 234 VEDHARALYQVVTE 247
>sp|Q3ZBE9|NSDHL_BOVIN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Bos
taurus GN=NSDHL PE=2 SV=1
Length = 356
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 10 ILGGCGFVGRNLVEHLVENDL-LRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLIHPS 68
++GGCGF+G+++VE L+ + V D ++ F P V+F G+L
Sbjct: 25 VIGGCGFLGQHMVEQLLARGYAVNVFDI------------RQGFDNPRVQFFLGDL---- 68
Query: 69 TCELIFLNSADNSDLTWEYVINCAAETRPGQAEEIYREGIYKLSINCATAAARYGILKYV 128
C L A T V +CA+ +E++ Y + N G+ K +
Sbjct: 69 -CSQQDLYPALKGVST---VFHCASPPPFNNNKELFYRVNYIGTKNVIETCKEAGVQKLI 124
Query: 129 EISSGEICTSHKHSCKESDEPQPWST-----IAKYKCQVEKALLEI--PGLNY--TIVRP 179
SS + K E P++T + K E+A+L P N+ T +RP
Sbjct: 125 LTSSASVIFEGV-DIKNGTEDLPYATKPIDYYTETKILQERAVLGAHDPEKNFLTTAIRP 183
Query: 180 GVVYGKSDRHNLAPRLVMCA 199
++G D L P L+ A
Sbjct: 184 HGIFGPRDPQ-LVPILIEAA 202
>sp|O53454|3BHS_MYCTU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase
OS=Mycobacterium tuberculosis GN=Rv1106c PE=1 SV=1
Length = 370
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 39/235 (16%)
Query: 8 VVILGGCGFVGRNLVEHLVEND-LLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLIH 66
V++ GG GFVG NLV L++ +R D+ +P + + P +E + G++
Sbjct: 17 VLVTGGAGFVGANLVTTLLDRGHWVRSFDR-APSL---------LPAHPQLEVLQGDITD 66
Query: 67 PSTCELIFLNSADNSDLTWEYVINCAA--ETRPGQA-EEIYREGIYKLSI----NCATAA 119
C + D D + + AA E G + + YR+ + +++ N A
Sbjct: 67 ADVCA----AAVDGIDT----IFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAG 118
Query: 120 ARYGILKYVEISSGEICTSHKHSCKESDEPQPWST-----IAKYKCQVEKALLEIPGLNY 174
R G+ ++V SS + ++ DE P++ + K E+ +L G++
Sbjct: 119 QRAGVQRFVYTSSNSVVMGGQN-IAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDG 177
Query: 175 TI---VRPGVVYGKSDRHNLAPRLVMCAIYQYLGETLQLFGGKSLPLNTVHVADL 226
+ +RP ++G D+ R + ++ + G L G KS L+ +V +L
Sbjct: 178 MLTCAIRPSGIWGNGDQTMF--RKLFESVLK--GHVKVLVGRKSARLDNSYVHNL 228
>sp|P53199|ERG26_YEAST Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ERG26 PE=1 SV=1
Length = 349
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 22/204 (10%)
Query: 7 AVVILGGCGFVGRNLVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPL--VEFISGNL 64
+V+I+GG GF+G +L++ D+ D ++ L EK K F + ++F G+L
Sbjct: 6 SVLIIGGSGFLGLHLIQQFF--DINPKPDIHIFDVRDLPEKLSKQFTFNVDDIKFHKGDL 63
Query: 65 IHPSTCELIFLNSADNSDLTWEYVINCAAETRPGQAEEIYREGIYKLSINCATAAARYGI 124
P E S N V++CA+ GQ +IY K + N + G+
Sbjct: 64 TSPDDMENAINESKAN------VVVHCASPMH-GQNPDIYDIVNVKGTRNVIDMCKKCGV 116
Query: 125 LKYVEISSGEICTSHKHSCKESDEPQPWSTIAKYKCQVEKALLEIPGLN--------YTI 176
V SS + + + +DE P + KA+ E L YT+
Sbjct: 117 NILVYTSSAGVIFNGQ-DVHNADETWPIPEVPMDAYNETKAIAEDMVLKANDPSSDFYTV 175
Query: 177 -VRPGVVYGKSDRHNLAPRLVMCA 199
+RP ++G DR L P L A
Sbjct: 176 ALRPAGIFGPGDRQ-LVPGLRQVA 198
>sp|P25284|NDUA9_NEUCR NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-40 PE=1 SV=2
Length = 375
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 99/248 (39%), Gaps = 50/248 (20%)
Query: 8 VVILGGCGFVGRNLVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLIHP 67
+ G G +GR +V L VI + +E K+ K ++G+L
Sbjct: 54 ATVFGATGQLGRYIVNRLARQGCTVVI-------PFRDEYNKRHLK------VTGDLGKV 100
Query: 68 STCELIFLN------SADNSDLTWEYVINCAAETRPGQAEEIYREGIYKLSINCATAAAR 121
E N S +SD+ + +I T+ E+++ EG ++ A A A+
Sbjct: 101 VMIEFDLRNTQSIEESVRHSDVVYN-LIGRDYPTKNFSFEDVHIEGAERI----AEAVAK 155
Query: 122 YGILKYVEISSGEICTSHKHSCKESDEPQPWSTIAKYKCQVEKALLEIPGLNYTIVRPGV 181
Y + +++ +SS ++ + E + ++T A+ + V E TIVRP
Sbjct: 156 YDVDRFIHVSS--------YNADPNSECEFFATKARGEQVVRSIFPET-----TIVRPAP 202
Query: 182 VYGKSDR--HNLAPRLVMCAIYQYLGETLQLFGGKSLPLNTVHVADLSRAIWHLLSELPP 239
++G DR H LA + + G N VHV D+ +A+ +L +
Sbjct: 203 MFGFEDRLLHKLAS-----------VKNILTSNGMQEKYNPVHVIDVGQALEQMLWDDNT 251
Query: 240 AKVYREIY 247
A E+Y
Sbjct: 252 ASETFELY 259
>sp|Q9HDU4|YHEB_SCHPO Uncharacterized protein PB2B2.11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBPB2B2.11 PE=3 SV=1
Length = 365
Score = 35.4 bits (80), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 147/375 (39%), Gaps = 63/375 (16%)
Query: 5 KPAVVILGGCGFVGRNLVEHLVEN--DL-LRVIDKVSPEIAWLNEKQKKIFKRPLVEFIS 61
K +I GG GF+G N +++ V+ D IDK+S + K+ +P F+
Sbjct: 9 KGYALITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPNFRFLE 68
Query: 62 GNLIHPSTCELIFLNSADNSDLT-WEYVINCAAETRPGQA--EEIYREGIYKLSINCATA 118
+L + + ++ ++S++ ++IN AAE+ ++ + +Y LS
Sbjct: 69 MDL--ATNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLE 126
Query: 119 AARYGI---------LKYVEISSGEICTSHKH--SCKESDEPQPWSTIAKYKCQVEKALL 167
R + L +V +S+ E+ S E + P S A K V+ L
Sbjct: 127 CVRILLGKKEELRNRLNFVHVSTDEVYGEQDENASVDEKSKLNPTSPYAASKAAVD---L 183
Query: 168 EIPGLNY------TIVRPGVVYG-KSDRHNLAPRLVMCAIYQYLGETLQ--------LFG 212
I Y T++R VYG + L P + + + +++ + Q L G
Sbjct: 184 IIQSYRYSYKISVTVIRANNVYGPRQYEEKLIP-MTLGKLKKFINQKSQKIMQDKITLHG 242
Query: 213 GKSLPLNTVHVADLSRAIWHLLSELPPAKVYREIYHVVDMGNTCQEDLMSTLTDIFGVKH 272
+H+ D AI +L K E+YH + E MS IF +
Sbjct: 243 DGLHKRKYLHIYDFINAI-----DLVWMKQGSEVYH------STLESKMS--GQIFNIGS 289
Query: 273 DYVGSVTASLCQLDLVGLTEEINDKHLTPWTQLCRKHNIDNTPLTPYIVPDMLNLKPVHL 332
D ++D + L + I D L + +L K N+D + ++ N L
Sbjct: 290 D---------DEIDNLSLVKFICDYFL--YRKLSLK-NLDYSKYITFVQDRNYNDSRYSL 337
Query: 333 DNAKLRDTGFEFQVP 347
+ K++ G+ Q+P
Sbjct: 338 NYEKIKSLGWRPQIP 352
>sp|Q8VDR7|TGDS_MOUSE dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=2
Length = 355
Score = 35.4 bits (80), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 30/251 (11%)
Query: 8 VVILGGCGFVGRNLVEHLVEN--DLLRV-IDKVSPEIAWLNEKQKKIFKRPLVEFISGNL 64
V++ GG GF+ +++ LVE+ D + V +DK+ + N + + + +FI G++
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKN--LEPVSNKQNYKFIQGDI 77
Query: 65 IHPSTCELIFLNSADNSDLTWEYVINCAAETRPGQAEEIYREGIYKLSINCATAAARYGI 124
+L+F + D+ + + +A E +Y + AA G+
Sbjct: 78 CDSHFVKLLF--EVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHV-LVNAAYEAGV 134
Query: 125 LKYVEISSGEIC-TSHKHSCKESDEPQPWSTIAKYKCQVE---KALLEIPGLNYTIVRPG 180
K++ +S+ E+ S ES QP + A K E ++ E I R
Sbjct: 135 EKFIYVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 181 VVYGKSDR-HNLAPRLV-------MCAIYQYLGETLQLFGGKSLPLNTVHVADLSRAIWH 232
VYG + P+ + C I+ G LQ N ++ AD+ A
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIH---GSGLQR-------RNFLYAADVVEAFLT 244
Query: 233 LLSELPPAKVY 243
+L++ P ++Y
Sbjct: 245 VLTKGEPGEIY 255
>sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1
SV=1
Length = 641
Score = 35.0 bits (79), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 158 YKCQVEKALLEIPGLNYTIVRPGVVYGKSDRHNLAPRLVMCAIYQYLGETLQLFGGKSLP 217
+K + E+AL+E GLNY IVRPG + +D + L + L +T LFGG+
Sbjct: 233 WKRKAEEALIES-GLNYAIVRPGGMERPTDAYKETHNLTLA-----LDDT--LFGGQ--- 281
Query: 218 LNTVHVADLSRAIWHLLSELPPAKVYREIYHVVDMGNTCQEDLMSTLTDIFGVKHDYVGS 277
++ + VA+L + P + +I VV T + L + K YV
Sbjct: 282 VSNLQVAELLACMAKN-----PQLSFSKIVEVV-AETTAPLTPIEKLLEKIPSKRPYVPP 335
Query: 278 VTASLCQLDLVGLTEEINDKHLTPWTQ----------LCRKHNIDNTPLTPY 319
AS+ T+E+ P TQ ++ N+ PL+PY
Sbjct: 336 PKASVA-------TKEVKPVPTKPVTQEPTAPKEDEAPPKEKNVKPRPLSPY 380
>sp|P55462|RFBB_RHISN Probable dTDP-glucose 4,6-dehydratase OS=Rhizobium sp. (strain
NGR234) GN=NGR_a03580 PE=3 SV=1
Length = 350
Score = 34.7 bits (78), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 98/255 (38%), Gaps = 30/255 (11%)
Query: 8 VVILGGCGFVGRNLVEHLVE-NDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLIH 66
+++ GG GF+G LV +LV N + +DK L +P+ + +
Sbjct: 3 ILVTGGAGFIGSALVRYLVSINAEVLNVDK-------LTYAGNLASLKPVEGLRNYRFLR 55
Query: 67 PSTCELIFLNSADNSDLTWEYVINCAAETRPGQ----AEEIYREGIYKLSINCATAAA-- 120
C+ + +N A + +YVI+ AAE+ + A++ + + TA
Sbjct: 56 ADICDRVAINEAFET-FQPDYVIHLAAESHVDRSITGADDFVQTNVNGTFTMLETARQYW 114
Query: 121 ------RYGILKYVEISSGEICTS-----HKHSCKESDEPQPWSTIAKYKCQVEKALLEI 169
R K + +S+ E+ S D P+S A
Sbjct: 115 SNLSQNRKAFFKMLHVSTDEVYGSLGDRGQFEEVSPYDPSSPYSASKAASDHFATAWQRT 174
Query: 170 PGLNYTIVRPGVVYGKSDR-HNLAPRLVMCAIYQYLGETLQLFGGKSLPLNTVHVADLSR 228
GL I YG L P +++ A+ + + L ++G S + ++V D +R
Sbjct: 175 YGLPVVISNCSNNYGPFHFPEKLIPLMILNALDR---KPLPVYGTGSNIRDWLYVDDHAR 231
Query: 229 AIWHLLSELPPAKVY 243
A+W ++ E P + Y
Sbjct: 232 ALWLIVREGRPGEKY 246
>sp|P14169|RFBE_SALTI CDP-paratose 2-epimerase OS=Salmonella typhi GN=rfbE PE=1 SV=2
Length = 338
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 79/200 (39%), Gaps = 29/200 (14%)
Query: 8 VVILGGCGFVGRNLVEHLVENDL-LRVIDKVSPEIA-----WLNE-----------KQKK 50
++I GGCGF+G NL + + L V D +S + A WL+ + K
Sbjct: 3 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKN 62
Query: 51 IFKRPLVEFISGNLIHPSTCELIFLNSADNSDLTWEYVINCAAETRPGQAEEIYREGIYK 110
R + +++ + H + ++ S DN + +E IN +A Y
Sbjct: 63 DVTRLITKYMPDSCFHLAG-QVAMTTSIDNPCMDFE--INVGGTLNLLEAVRQYNS---N 116
Query: 111 LSINCATAAARYGIL---KYVEISSGEICTSHKHSCKESDEPQPWSTIAKYKCQVEKALL 167
+I ++ YG L KY E + C + ES + S K ++ +L
Sbjct: 117 CNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYML 176
Query: 168 E---IPGLNYTIVRPGVVYG 184
+ I GLN + R +YG
Sbjct: 177 DYARIFGLNTVVFRHSSMYG 196
>sp|P29782|RMLB_STRGR dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=1
SV=1
Length = 328
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 12/133 (9%)
Query: 118 AAARYGILKYVEISSGEICTSHKHSCKESDEP-QPWSTIAKYKCQVEKALLEIP-----G 171
AA R+G+ +V++S+ E+ S +H DEP +P S + K + LL + G
Sbjct: 112 AATRHGVASFVQVSTDEVYGSLEHGSWTEDEPLRPNSPYSASKASGD--LLALAHHVSHG 169
Query: 172 LNYTIVRPGVVYG-KSDRHNLAPRLVMCAIYQYLGETLQLFGGKSLPLNTVHVADLSRAI 230
L+ + R YG + L PR + + G + L+G +HV D R I
Sbjct: 170 LDVRVTRCSNNYGPRQFPEKLIPRFITLLMD---GHRVPLYGDGLNVREWLHVDDHVRGI 226
Query: 231 WHLLSELPPAKVY 243
+ + +VY
Sbjct: 227 EAVRTRGRAGRVY 239
>sp|Q59678|GALE_PASHA UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3
SV=1
Length = 338
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 109/264 (41%), Gaps = 58/264 (21%)
Query: 7 AVVILGGCGFVGRN-LVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLI 65
A+++ GG G++G + LVE L EN + V+D +S E+ K+I + V+F G+++
Sbjct: 2 AILVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERVKQITGKS-VKFYQGDIL 60
Query: 66 HPSTCELIFLNSADNSDLTWEYVINCAAETRPGQAEE--------------IYREGIYKL 111
IF A+N E VI+ A G+ E + E + K
Sbjct: 61 DRDILRKIF---AENQ---IESVIHFAGLKAVGETSENRYVTIKNNVTGSIVLVEEMLKA 114
Query: 112 SINC---ATAAARYGILKYVEISSGEICTSHKHSCKESDEPQPWSTIAKYKCQ--VEKAL 166
++N +++A YG + + I SC P+ T +KY + +E +
Sbjct: 115 NVNTIVFSSSATVYGDPQIIPIV---------ESCPVGGTTNPYGT-SKYMVERILEDTV 164
Query: 167 LEIPGLNYTIVRPGVVYGKSDR-----------HNLAPRLVMCAIYQYLGETLQLFGGK- 214
P L+ ++R G + +NL P + A+ + L +FGG
Sbjct: 165 KAFPQLSAVVLRYFNRVGAHESGLIGEDPNGIPNNLMPFISQVAVGKL--PQLSVFGGDY 222
Query: 215 -----SLPLNTVHVADLSRAIWHL 233
+ + +HV DL A+ HL
Sbjct: 223 NTHDGTGVRDYIHVVDL--ALGHL 244
>sp|Q05026|GALE_NEIGO UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1
Length = 338
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 8 VVILGGCGFVGRNLVEHLVENDLLRVI-DKVSPEIAWLNEKQKKIFKRPLVEFISGNLIH 66
V+I GG GF+G + LV++ VI D + A + + ++I R + F G++
Sbjct: 3 VLITGGTGFIGSHTAVSLVQSGYDAVILDNLCNSSAAVLPRLRQITGRN-IPFYQGDIRD 61
Query: 67 PSTCELIFLNSADNSDLTWEYVINCAAETRPGQA----EEIYREGIYKLSINCATAAARY 122
IF S+ E VI+ A G++ + Y +Y S+ A AR
Sbjct: 62 CQILRQIF------SEHEIESVIHFAGLKAVGESVAEPTKYYGNNVYG-SLVLAEEMARA 114
Query: 123 GILKYVEISSGEICTSHKHSCKESDEPQPWSTIAKY---KCQVEKALLEI 169
G+LK V SS +++ +P T Y K VE+ L +I
Sbjct: 115 GVLKIV-FSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERMLTDI 163
>sp|A6GZI7|CINAL_FLAPJ CinA-like protein OS=Flavobacterium psychrophilum (strain JIP02/86
/ ATCC 49511) GN=FP1434 PE=3 SV=1
Length = 418
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 3 QNKPAVVIL-GGCG-----FVGRNLVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPL 56
QNK VVI+ GG G + L E+ ND L + +KV + L E FKRP+
Sbjct: 57 QNKVDVVIITGGLGPTKDDITKKTLCEYF--NDKLIINEKVLVHVTQLIEDY---FKRPI 111
Query: 57 VEFISGNLIHPSTCELIFLNSADNSDLTWEYVINCAAETRPG 98
+ + PS CE++F N + W N + PG
Sbjct: 112 TQVNKDQALVPSKCEVLF-NQVGTAPGMWLQKENTVFISLPG 152
>sp|Q4QQZ4|MAT2B_XENLA Methionine adenosyltransferase 2 subunit beta OS=Xenopus laevis
GN=mat2b PE=2 SV=1
Length = 334
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 101/276 (36%), Gaps = 30/276 (10%)
Query: 8 VVILGGCGFVGRNLVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLIHP 67
+I G G +GR + + EN +W RP E + NL+
Sbjct: 31 ALITGATGLLGRAVYKEFKEN-------------SWHVLGCGYSRARPRFECL--NLLDE 75
Query: 68 STCELIFLNSADNSDLTWEYVINCAAETRPGQAE---EIYREGIYKLSINCATAAARYGI 124
+ + + D +I+CAAE RP E E+ S N A AA G
Sbjct: 76 AAVKALI------QDFKPHVIIHCAAERRPDIVESQPELASLLNVVASENLAKVAAGVGA 129
Query: 125 LKYVEISSGEICTSHKHSCKESDEPQPWSTIAKYKCQVEKALLEIPGLNYTIVRPGVVYG 184
+ +SS + +E P P + K K E+A+L+ ++R V+YG
Sbjct: 130 F-LIYVSSDYVFDGTSPPYREDSIPHPLNLYGKTKLDGERAVLQ-NNEGAAVLRVPVMYG 187
Query: 185 KSDRHNLAPRLVMCAIYQYLGETLQL-FGGKSLPLNTVHVADLSRAIWHLLSELPPAKVY 243
++ + + ++ Q+ ++ L + P HV D++ L
Sbjct: 188 DVEKLSESAVTILFDKVQFSNKSANLDHCQQRFP---THVKDVATVCLQLTERKIQDPSI 244
Query: 244 REIYHVVDMGNTCQEDLMSTLTDIFGVKHDYVGSVT 279
+ IYH + ++ + D F + ++ +T
Sbjct: 245 KGIYHWSGNEQMTKYEIACAMADAFNLPSSHLRPIT 280
>sp|A6QLW2|TGDS_BOVIN dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1
Length = 355
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 30/251 (11%)
Query: 8 VVILGGCGFVGRNLVEHLVE---NDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNL 64
V++ GG GF+ +++ LVE N ++ +DK+ + N + I + +FI G++
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKN--LETISNKQNYKFIQGDI 77
Query: 65 IHPSTCELIFLNSADNSDLTWEYVINCAAETRPGQAEEIYREGIYKLSINCATAAARYGI 124
+L+F + D+ + + +A E +Y + +AA +
Sbjct: 78 CDSHFVKLLF--ETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHV-LVSAAHEARV 134
Query: 125 LKYVEISSGEIC-TSHKHSCKESDEPQPWSTIAKYKCQVE---KALLEIPGLNYTIVRPG 180
K++ +S+ E+ S ES QP + A K E ++ E I R
Sbjct: 135 EKFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSS 194
Query: 181 VVYGKSDR-HNLAPRLV-------MCAIYQYLGETLQLFGGKSLPLNTVHVADLSRAIWH 232
VYG + P+ + C I+ G LQ N ++ D+ A
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIH---GTGLQT-------RNFLYATDVVEAFLT 244
Query: 233 LLSELPPAKVY 243
+L + P ++Y
Sbjct: 245 VLKKGKPGEIY 255
>sp|P47077|NOP9_YEAST Nucleolar protein 9 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=NOP9 PE=1 SV=1
Length = 666
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 15 GFVGRNLVEHLVENDLLRVIDKVSPEIAWL 44
FV R L+EHL E D+ +++D V PE++ L
Sbjct: 387 AFVVRALLEHLKEKDVKQILDAVVPELSML 416
>sp|C8ZBK1|NOP9_YEAS8 Nucleolar protein 9 OS=Saccharomyces cerevisiae (strain Lalvin
EC1118 / Prise de mousse) GN=NOP9 PE=3 SV=2
Length = 666
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 15 GFVGRNLVEHLVENDLLRVIDKVSPEIAWL 44
FV R L+EHL E D+ +++D V PE++ L
Sbjct: 387 AFVVRALLEHLKEKDVKQILDAVVPELSML 416
>sp|A6ZPV9|NOP9_YEAS7 Nucleolar protein 9 OS=Saccharomyces cerevisiae (strain YJM789)
GN=NOP9 PE=3 SV=1
Length = 666
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 15 GFVGRNLVEHLVENDLLRVIDKVSPEIAWL 44
FV R L+EHL E D+ +++D V PE++ L
Sbjct: 387 AFVVRALLEHLKEKDVKQILDAVVPELSML 416
>sp|C7GV42|NOP9_YEAS2 Nucleolar protein 9 OS=Saccharomyces cerevisiae (strain JAY291)
GN=NOP9 PE=3 SV=1
Length = 666
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 15 GFVGRNLVEHLVENDLLRVIDKVSPEIAWL 44
FV R L+EHL E D+ +++D V PE++ L
Sbjct: 387 AFVVRALLEHLKEKDVKQILDAVVPELSML 416
>sp|Q54SW3|GRLF_DICDI Metabotropic glutamate receptor-like protein F OS=Dictyostelium
discoideum GN=grlF PE=2 SV=1
Length = 770
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 9/92 (9%)
Query: 69 TCELIFLNSADNSDLTWEYVINCAAETRPGQAEEIYREGIYKLSINCATAAARYGILKYV 128
TC++ L S D SDL + Y++N A Q +Y IY + +T A + I V
Sbjct: 26 TCKISVLLSGDKSDLGYNYMMNEARVLAESQL-HMYPFSIYYEHLEESTLEAEHAIQDSV 84
Query: 129 EISSGEICTSH--------KHSCKESDEPQPW 152
+ + I S K++ K DEP W
Sbjct: 85 DKGANLIVVSSVIHFSLGVKYATKYKDEPIYW 116
>sp|O95455|TGDS_HUMAN dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=2 SV=1
Length = 350
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 30/251 (11%)
Query: 8 VVILGGCGFVGRNLVEHLVE---NDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNL 64
V++ GG GF+ +++ LVE N ++ +DK+ + N + I + +FI G++
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKN--LETISNKQNYKFIQGDI 77
Query: 65 IHPSTCELIFLNSADNSDLTWEYVINCAAETRPGQAEEIYREGIYKLSINCATAAARYGI 124
+L+F + D+ + + +A E +Y + +AA +
Sbjct: 78 CDSHFVKLLF--ETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHV-LVSAAHEARV 134
Query: 125 LKYVEISSGEIC-TSHKHSCKESDEPQPWSTIAKYKCQVE---KALLEIPGLNYTIVRPG 180
K++ +S+ E+ S ES QP + A K E ++ E I R
Sbjct: 135 EKFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSS 194
Query: 181 VVYGKSDR-HNLAPRLV-------MCAIYQYLGETLQLFGGKSLPLNTVHVADLSRAIWH 232
VYG + P+ + C I+ G LQ N ++ D+ A
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIH---GSGLQT-------RNFLYATDVVEAFLT 244
Query: 233 LLSELPPAKVY 243
+L + P ++Y
Sbjct: 245 VLKKGKPGEIY 255
>sp|B3LQ92|NOP9_YEAS1 Nucleolar protein 9 OS=Saccharomyces cerevisiae (strain RM11-1a)
GN=NOP9 PE=3 SV=1
Length = 666
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 16 FVGRNLVEHLVENDLLRVIDKVSPEIAWL 44
FV R L+EHL E D+ +++D V PE++ L
Sbjct: 388 FVVRALLEHLKEKDVKQILDAVVPELSML 416
>sp|Q92GB2|DPO3A_RICCN DNA polymerase III subunit alpha OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=dnaE PE=3 SV=1
Length = 1181
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 232 HLLSELPPAKVYREIYHVVDMGNTCQEDLMSTLTDIFGVKHDYVGSVTASLCQLDLVGLT 291
LLS +P Y YH N +S+L+ V DY T + + + +GL
Sbjct: 931 QLLSSIPKLLSYSTAYHEEQESNQFSLIKVSSLSPTILVSSDYADKNTLAFYEFEAMGLF 990
Query: 292 EEINDKHLTPWTQLCRKHNIDNTPLTPYIVPDMLN 326
I++ LT + ++ + NI NT +PD N
Sbjct: 991 --ISNHPLTEYQEIFSRLNILNTADLHNNLPDGTN 1023
>sp|Q1E7Y1|FMP52_COCIM Protein FMP52, mitochondrial OS=Coccidioides immitis (strain RS)
GN=FMP52 PE=3 SV=1
Length = 246
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 76/196 (38%), Gaps = 39/196 (19%)
Query: 8 VVILGGCGFVGRNLVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLIHP 67
I+GG G VG N+V L+ SP +A ++ + +RP ++ +LI
Sbjct: 4 TAIVGGTGLVGSNIVNILLS----------SPNVAHIDF----LARRPPSTPVTKDLIES 49
Query: 68 STCELIFLNSADNSDLTW-----------EYVINCAAETRPGQAEEIYREGI-YKLSINC 115
+ S D +W E + A TR + + + +++
Sbjct: 50 HPSKFASYISTDPPS-SWASHLRSTSPAPEIFFSTLATTRATAGSLAAQRALEHDANVDL 108
Query: 116 ATAAARYGILKYVEISSGEICTSHKHSCKESDEPQPWSTIAKYKCQVEKALLEIPGLNYT 175
A AA G YV +SS S K P+ K K +EK++L++
Sbjct: 109 ARAAKEAGTKVYVLVSSAGADPSSK---------LPY---MKLKGDIEKSILDLNFEKTI 156
Query: 176 IVRPGVVYGKSDRHNL 191
I+RPG + G+ + +
Sbjct: 157 ILRPGFLSGQREERRI 172
>sp|Q9S642|RMLB_NEIMA dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup A
/ serotype 4A (strain Z2491) GN=rfbB1 PE=3 SV=1
Length = 341
Score = 32.3 bits (72), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 97/249 (38%), Gaps = 30/249 (12%)
Query: 8 VVILGGCGFVGRNLVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEFISGNLIHP 67
+++ GG GF+G +V H++ N V++ A E I P F ++
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 63
Query: 68 STCELIFLNSADNSDLTWEYVINCAAETRP----GQAEEIYREGIYKLSINCATAAARYG 123
+ + +F ++ V++ AAE+ G A E + I + N AA Y
Sbjct: 64 AELDRVFAQHRPDA------VMHLAAESHVDRSIGSAGEFIQTNIVG-TFNLLEAARAYR 116
Query: 124 ---------ILKYVEISSGEICTSHKHSCKESDEPQPWSTIAKYKC------QVEKALLE 168
++ IS+ E+ + E P++ + Y + +A L
Sbjct: 117 QQMPSEKHEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLR 176
Query: 169 IPGLNYTIVRPGVVYGKSDRHNLAPRLVMCAIYQYL-GETLQLFGGKSLPLNTVHVADLS 227
GL + YG ++ +L+ I L G+ L ++G + + V D +
Sbjct: 177 TYGLPTIVTNCSNNYGP---YHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHA 233
Query: 228 RAIWHLLSE 236
RA++ +++E
Sbjct: 234 RALYQVVTE 242
>sp|P79136|CAPZB_BOVIN F-actin-capping protein subunit beta OS=Bos taurus GN=CAPZB PE=1
SV=1
Length = 301
Score = 32.0 bits (71), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 233 LLSELPPAKVYREIYHVVDMGNTCQEDLMSTLTDIFGVKHDYVGSVTASLCQLDLVGLTE 292
L+ LPP ++ + + ++D+ + EDL+S++ + D V LC + G
Sbjct: 41 LMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDG--- 97
Query: 293 EINDKHLTPWTQLCRKHNIDNTPLTPYIVPDM-LNLKPVHLDNA--KLRDTGFEFQV 346
D + +PW+ N + PL +P L V +NA + RD FE V
Sbjct: 98 ---DSYRSPWS------NKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGV 145
>sp|Q5XI32|CAPZB_RAT F-actin-capping protein subunit beta OS=Rattus norvegicus GN=Capzb
PE=1 SV=1
Length = 272
Score = 32.0 bits (71), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Query: 233 LLSELPPAKVYREIYHVVDMGNTCQEDLMSTLTDIFGVKHDYVGSVTASLCQLDLVGLTE 292
L+ LPP ++ + + ++D+ + EDL+S++ + D V LC + G
Sbjct: 12 LMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDG--- 68
Query: 293 EINDKHLTPWTQLCRKHNIDNTPLTPYIVPDM-LNLKPVHLDNA--KLRDTGFEFQVPQL 349
D + +PW+ N + PL +P L V +NA + RD FE V +
Sbjct: 69 ---DSYRSPWS------NKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSV 119
>sp|Q5R507|CAPZB_PONAB F-actin-capping protein subunit beta OS=Pongo abelii GN=CAPZB PE=2
SV=2
Length = 272
Score = 32.0 bits (71), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Query: 233 LLSELPPAKVYREIYHVVDMGNTCQEDLMSTLTDIFGVKHDYVGSVTASLCQLDLVGLTE 292
L+ LPP ++ + + ++D+ + EDL+S++ + D V LC + G
Sbjct: 12 LMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDG--- 68
Query: 293 EINDKHLTPWTQLCRKHNIDNTPLTPYIVPDM-LNLKPVHLDNA--KLRDTGFEFQVPQL 349
D + +PW+ N + PL +P L V +NA + RD FE V +
Sbjct: 69 ---DSYRSPWS------NKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSV 119
>sp|P36387|CLPP_PINCO ATP-dependent Clp protease proteolytic subunit OS=Pinus contorta
GN=clpP PE=3 SV=1
Length = 205
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 74 FLNSADNSDLTWEYVINCAAETRPGQAEEIYREGIYKLSINCATAAARYGILKYV 128
F N + + L EY+ C E R GQ EE+ + + + AT A YGI+ V
Sbjct: 140 FHNESKHVTLVREYITECYIE-RTGQPEEVIQRDLNRDVFMSATEAQAYGIVDVV 193
>sp|P47756|CAPZB_HUMAN F-actin-capping protein subunit beta OS=Homo sapiens GN=CAPZB PE=1
SV=4
Length = 277
Score = 32.0 bits (71), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 233 LLSELPPAKVYREIYHVVDMGNTCQEDLMSTLTDIFGVKHDYVGSVTASLCQLDLVGLTE 292
L+ LPP ++ + + ++D+ + EDL+S++ + D V LC + G
Sbjct: 12 LMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDG--- 68
Query: 293 EINDKHLTPWTQLCRKHNIDNTPLTPYIVPDM-LNLKPVHLDNA--KLRDTGFEFQV 346
D + +PW+ N + PL +P L V +NA + RD FE V
Sbjct: 69 ---DSYRSPWS------NKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGV 116
>sp|Q7Z403|TMC6_HUMAN Transmembrane channel-like protein 6 OS=Homo sapiens GN=TMC6 PE=2
SV=2
Length = 805
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 13/84 (15%)
Query: 9 VILGGC--GFVGRNLVEHLVENDLLRVIDKVSPEIAWLNEKQKKIFKRPLVEF-ISGNLI 65
V+ G C FVG+ L LV + +L ++D + E+ W +KK+ +R EF I+ N++
Sbjct: 535 VLQGQCWEDFVGQELYRFLVMDFVLMLLDTLFGELVWRIISEKKLKRRRKPEFDIARNVL 594
Query: 66 HPSTCELIFLNSADNSDLTWEYVI 89
ELI+ LTW V+
Sbjct: 595 -----ELIY-----GQTLTWLGVL 608
>sp|Q28265|KCMA1_CANFA Calcium-activated potassium channel subunit alpha-1 (Fragment)
OS=Canis familiaris GN=KCNMA1 PE=2 SV=2
Length = 1159
Score = 31.6 bits (70), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 14 CGFVGRNLVEHLVENDLLRVIDKVSPEIAWL-----NEKQKKIFKRPL--VEFISGNLIH 66
CG + V H +++ L + D V+ EI +L N + + +FKR VEF G++++
Sbjct: 351 CGHITLESVSHFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLN 410
Query: 67 PSTCELIFLNSAD 79
P + + SAD
Sbjct: 411 PHDLARVKIESAD 423
>sp|A0PFK7|CAPZB_PIG F-actin-capping protein subunit beta OS=Sus scrofa GN=CAPZB PE=2
SV=1
Length = 277
Score = 31.6 bits (70), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 233 LLSELPPAKVYREIYHVVDMGNTCQEDLMSTLTDIFGVKHDYVGSVTASLCQLDLVGLTE 292
L+ LPP ++ + + ++D+ + EDL+S++ + D V LC + G
Sbjct: 12 LMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDG--- 68
Query: 293 EINDKHLTPWTQLCRKHNIDNTPLTPYIVPDM-LNLKPVHLDNA--KLRDTGFEFQV 346
D + +PW+ N + PL +P L V +NA + RD FE V
Sbjct: 69 ---DSYRSPWS------NKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGV 116
>sp|P14315|CAPZB_CHICK F-actin-capping protein subunit beta isoforms 1 and 2 OS=Gallus
gallus GN=CAPZB PE=1 SV=3
Length = 277
Score = 31.6 bits (70), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 233 LLSELPPAKVYREIYHVVDMGNTCQEDLMSTLTDIFGVKHDYVGSVTASLCQLDLVGLTE 292
L+ LPP ++ + + ++D+ + EDL+S++ + D V LC + G
Sbjct: 12 LMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDG--- 68
Query: 293 EINDKHLTPWT 303
D + +PW+
Sbjct: 69 ---DSYRSPWS 76
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,744,511
Number of Sequences: 539616
Number of extensions: 6072185
Number of successful extensions: 13523
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 13506
Number of HSP's gapped (non-prelim): 61
length of query: 359
length of database: 191,569,459
effective HSP length: 119
effective length of query: 240
effective length of database: 127,355,155
effective search space: 30565237200
effective search space used: 30565237200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)