BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18117
(215 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
S +GTPYYMSPER+ E Y+F SD+WSLGC+LYEM ALQSPF+ ++L LCK+IE
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254
Query: 106 FPPLPS 111
+PPLPS
Sbjct: 255 YPPLPS 260
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 59/89 (66%), Gaps = 4/89 (4%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPN+++ ++F + EL +VLELAD GDL+ +I +++K + E VW YF Q
Sbjct: 87 KQLNHPNVIKYYASFIEDN--ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 178 IAAALQYVHSRRILHRGER--ETFLSVLG 204
+ +AL+++HSRR++HR + F++ G
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFITATG 173
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
+F+GTPYYMSPE++ + Y+ SD+WSLGC+LYE+ AL PF + S L +I
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGK 232
Query: 106 FPPLPSGVLYSD------------KTLHHPNIVEL 128
F +P YSD K H P++ E+
Sbjct: 233 FRRIP--YRYSDELNEIITRMLNLKDYHRPSVEEI 265
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
TS +F+GTPYYMSPE++ + Y+ SD+WSLGC+LYE+
Sbjct: 170 TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ L HPNIV R+ L++V+E + GDLA VI + +++ +L E V Q
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 178 IAAALQYVHSR-----RILHR 193
+ AL+ H R +LHR
Sbjct: 120 LTLALKECHRRSDGGHTVLHR 140
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
+F+GTPYYMSPE++ + Y+ SD+WSLGC+LYE+ AL PF + S L +I
Sbjct: 175 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGK 232
Query: 106 FPPLPSGVLYSD------------KTLHHPNIVEL 128
F +P YSD K H P++ E+
Sbjct: 233 FRRIP--YRYSDELNEIITRMLNLKDYHRPSVEEI 265
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
TS +F+GTPYYMSPE++ + Y+ SD+WSLGC+LYE+
Sbjct: 170 TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ L HPNIV R+ L++V+E + GDLA VI + +++ +L E V Q
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 178 IAAALQYVHSR-----RILHR 193
+ AL+ H R +LHR
Sbjct: 120 LTLALKECHRRSDGGHTVLHR 140
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
F+GTPYYMSPE++ + Y+ SD+WSLGC+LYE+ AL PF + S L +I
Sbjct: 175 EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGK 232
Query: 106 FPPLPSGVLYSD------------KTLHHPNIVEL 128
F +P YSD K H P++ E+
Sbjct: 233 FRRIP--YRYSDELNEIITRMLNLKDYHRPSVEEI 265
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 29/35 (82%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
F+GTPYYMSPE++ + Y+ SD+WSLGC+LYE+
Sbjct: 175 EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ L HPNIV R+ L++V+E + GDLA VI + +++ +L E V Q
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 178 IAAALQYVHSR-----RILHR 193
+ AL+ H R +LHR
Sbjct: 120 LTLALKECHRRSDGGHTVLHR 140
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
+GTPYY+SPE + Y+ SD+W+LGCVLYE+ L+ F + S+ L +I FP
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG--SMKNLVLKIISGSFP 243
Query: 108 PL 109
P+
Sbjct: 244 PV 245
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGT--PYYMSPERLKELKYSFPS- 68
+GTPYY+SPE + Y+ SD+W+LGCVLYE+ + M LK + SFP
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPV 245
Query: 69 ------DVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPL 109
D+ SL L++ P + + + KRIE L P L
Sbjct: 246 SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQL 292
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
+ HPNIV+ R +F L++V++ + GDL I QK E + +F QI
Sbjct: 79 NMKHPNIVQYRESFEENGS--LYIVMDYCEGGDLFKRINA--QKGVLFQEDQILDWFVQI 134
Query: 179 AAALQYVHSRRILHR 193
AL++VH R+ILHR
Sbjct: 135 CLALKHVHDRKILHR 149
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ +GT YM+PE +K +Y+F D W+LGC+LYEM+A QSPF
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
++ +GT YM+PE +K +Y+F D W+LGC+LYE+
Sbjct: 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ +GT YM+PE +K +Y+F D W+LGC+LYEM+A QSPF
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
++ +GT YM+PE +K +Y+F D W+LGC+LYE+
Sbjct: 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 40/81 (49%), Gaps = 20/81 (24%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
+SF+GT YMSPERL+ YS SD+WS+G L EM + P S S MA
Sbjct: 180 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGS---------MA 230
Query: 105 LF-----------PPLPSGVL 114
+F P LPSGV
Sbjct: 231 IFELLDYIVNEPPPKLPSGVF 251
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
S +SF+GT YMSPERL+ YS SD+WS+G L E+
Sbjct: 177 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 215
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 14/123 (11%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
S +SF+GT YM+PERL+ YS SD+WS+G L E+ +G Y + P KEL+
Sbjct: 168 SMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVEL--AVGR-YPIPPPDAKELEAI 224
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
F V ++ + + +S +G+ R MA+F P LP+GV
Sbjct: 225 FGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVF 284
Query: 115 YSD 117
D
Sbjct: 285 TPD 287
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
Query: 40 VLYEVDSFLGTPYYMSPE-----RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISL 94
L + DSF+GTPY+M+PE +K+ Y + +D+WSLG L EM ++ P H L
Sbjct: 162 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP----HHEL 217
Query: 95 NGLCKRIEMALFPP 108
N + +++A P
Sbjct: 218 NPMRVLLKIAKSDP 231
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 9 DSFLGTPYYMSPE-----RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL 59
DSF+GTPY+M+PE +K+ Y + +D+WSLG L E+ + ++P R+
Sbjct: 167 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV 222
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
T HP IV+L A+ +L++++E G + ++ E + L E + RQ+
Sbjct: 64 TCDHPYIVKLLGAYYHDG--KLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQM 118
Query: 179 AAALQYVHSRRILHRGER--ETFLSVLGD 205
AL ++HS+RI+HR + +++ GD
Sbjct: 119 LEALNFLHSKRIIHRDLKAGNVLMTLEGD 147
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
Query: 40 VLYEVDSFLGTPYYMSPE-----RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISL 94
L + DSF+GTPY+M+PE +K+ Y + +D+WSLG L EM ++ P H L
Sbjct: 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP----HHEL 225
Query: 95 NGLCKRIEMALFPP 108
N + +++A P
Sbjct: 226 NPMRVLLKIAKSDP 239
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 9 DSFLGTPYYMSPE-----RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL 59
DSF+GTPY+M+PE +K+ Y + +D+WSLG L E+ + ++P R+
Sbjct: 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV 230
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
T HP IV+L A+ +L++++E G + ++ E + L E + RQ+
Sbjct: 72 TCDHPYIVKLLGAYYHDG--KLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQM 126
Query: 179 AAALQYVHSRRILHR 193
AL ++HS+RI+HR
Sbjct: 127 LEALNFLHSKRIIHR 141
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 45 DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
DSF+GTPY+M+PE + K+ Y + +DVWSLG L EM ++ P H LN +
Sbjct: 193 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRV 248
Query: 100 RIEMALFPP 108
+++A P
Sbjct: 249 LLKIAKSEP 257
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 9 DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL 59
DSF+GTPY+M+PE + K+ Y + +DVWSLG L E+ + ++P R+
Sbjct: 193 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 248
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
HPNIV+L AF + L++++E G + V+ E + L E + +Q A
Sbjct: 93 HPNIVKLLDAFYYENN--LWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDA 147
Query: 182 LQYVHSRRILHR 193
L Y+H +I+HR
Sbjct: 148 LNYLHDNKIIHR 159
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 45 DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
DSF+GTPY+M+PE + K+ Y + +DVWSLG L EM ++ P H LN +
Sbjct: 193 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRV 248
Query: 100 RIEMALFPP 108
+++A P
Sbjct: 249 LLKIAKSEP 257
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 9 DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL 59
DSF+GTPY+M+PE + K+ Y + +DVWSLG L E+ + ++P R+
Sbjct: 193 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 248
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
HPNIV+L AF + L++++E G + V+ E + L E + +Q A
Sbjct: 93 HPNIVKLLDAFYYENN--LWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDA 147
Query: 182 LQYVHSRRILHR 193
L Y+H +I+HR
Sbjct: 148 LNYLHDNKIIHR 159
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 45 DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
DSF+GTPY+M+PE + K+ Y + +DVWSLG L EM ++ P H LN +
Sbjct: 167 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRV 222
Query: 100 RIEMALFPP 108
+++A P
Sbjct: 223 LLKIAKSEP 231
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 9 DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL 59
DSF+GTPY+M+PE + K+ Y + +DVWSLG L E+ + ++P R+
Sbjct: 167 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 222
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
HPNIV+L AF + L++++E G + V+ E + L E + +Q A
Sbjct: 66 HPNIVKLLDAFYYENN--LWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDA 120
Query: 182 LQYVHSRRILHR 193
L Y+H +I+HR
Sbjct: 121 LNYLHDNKIIHR 132
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
S +SF+GT YMSPERL+ YS SD+WS+G L E+ +G Y + P KEL+
Sbjct: 185 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM--AVGR-YPIPPPDAKELELM 241
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
F V +K G+ R MA+F P LPSGV
Sbjct: 242 FGCQVEGDAAETPPRPRTPGRPLNKF----GMDSRPPMAIFELLDYIVNEPPPKLPSGVF 297
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
+SF+GT YMSPERL+ YS SD+WS+G L EM + P + R MA
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKED---SRPPMA 217
Query: 105 LF-----------PPLPSGVL 114
+F P LPSGV
Sbjct: 218 IFELLDYIVNEPPPKLPSGVF 238
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
S +SF+GT YMSPERL+ YS SD+WS+G L E+
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
S +SF+GT YMSPERL+ YS SD+WS+G L E+ +G Y + P KEL+
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM--AVGR-YPIPPPDAKELELM 214
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
F V S + G+ R MA+F P LPSGV
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSY----GMDSRPPMAIFELLDYIVNEPPPKLPSGVF 270
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
S +SF+GT YMSPERL+ YS SD+WS+G L E+ +G Y + P KEL+
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM--AVGR-YPIPPPDAKELELM 214
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
F V S + G+ R MA+F P LPSGV
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSY----GMDSRPPMAIFELLDYIVNEPPPKLPSGVF 270
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HPNIV+L + + L+L++E A G++ ++A R K E S FR
Sbjct: 66 KILNHPNIVKLFEVIETE--KTLYLIMEYASGGEVFDYLVAHGRMK-----EKEARSKFR 118
Query: 177 QIAAALQYVHSRRILHR 193
QI +A+QY H +RI+HR
Sbjct: 119 QIVSAVQYCHQKRIVHR 135
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 32 SDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSK 90
S+ +++G L D+F G+P Y +PE + KY P DVWSLG +LY +V+ PF +
Sbjct: 158 SNEFTVGGKL---DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 214
Query: 91 HIS 93
++
Sbjct: 215 NLK 217
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
+D+F G+P Y +PE + KY P DVWSLG +LY + S F G ER+
Sbjct: 165 GKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 224
Query: 61 ELKYSFP 67
KY P
Sbjct: 225 RGKYRIP 231
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
S +SF+GT YMSPERL+ YS SD+WS+G L E+ +G Y + P KEL+
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM--AVGR-YPIPPPDAKELELM 214
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
F V S + G+ R MA+F P LPSGV
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSY----GMDSRPPMAIFELLDYIVNEPPPKLPSGVF 270
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
S +SF+GT YMSPERL+ YS SD+WS+G L E+ +G Y + P KEL+
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM--AVGR-YPIPPPDAKELELM 214
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
F V S + G+ R MA+F P LPSGV
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSY----GMDSRPPMAIFELLDYIVNEPPPKLPSGVF 270
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HPNIV+L + + L+L++E A G++ ++A R K E S FR
Sbjct: 69 KILNHPNIVKLFEVIETE--KTLYLIMEYASGGEVFDYLVAHGRMK-----EKEARSKFR 121
Query: 177 QIAAALQYVHSRRILHR 193
QI +A+QY H +RI+HR
Sbjct: 122 QIVSAVQYCHQKRIVHR 138
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHIS 93
++D+F G P Y +PE + KY P DVWSLG +LY +V+ PF +++
Sbjct: 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 220
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
+D+F G P Y +PE + KY P DVWSLG +LY + S F G ER+
Sbjct: 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227
Query: 61 ELKYSFP 67
KY P
Sbjct: 228 RGKYRIP 234
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+SF+GT Y+SPE L E S SD+W+LGC++Y++VA PF
Sbjct: 191 ANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + +SF+GT Y+SPE L E S SD+W+LGC++Y++ + F Y+ +++
Sbjct: 187 KQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 246
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 247 IKLEYDFPEKFF 258
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G L I +K E Y +I
Sbjct: 89 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGCLLKYI----RKIGSFDETCTRFYTAEIV 142
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 143 SALEYLHGKGIIHR 156
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 45 DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
D F+GTPY+M+PE + K+ Y + +DVWSLG L EM ++ P H LN +
Sbjct: 193 DXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRV 248
Query: 100 RIEMALFPP 108
+++A P
Sbjct: 249 LLKIAKSEP 257
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 9 DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL 59
D F+GTPY+M+PE + K+ Y + +DVWSLG L E+ + ++P R+
Sbjct: 193 DXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 248
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
HPNIV+L AF + L++++E G + V+ E + L E + +Q A
Sbjct: 93 HPNIVKLLDAFYYENN--LWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDA 147
Query: 182 LQYVHSRRILHR 193
L Y+H +I+HR
Sbjct: 148 LNYLHDNKIIHR 159
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
+GTPY+M+PE + L Y D+WSLG ++ EMV + P+F++
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 223
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE-VDSFLGTPYYMSPERLKELK 63
+GTPY+M+PE + L Y D+WSLG ++ E VD G P Y + LK +K
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD---GEPPYFNEPPLKAMK 230
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAE-CLVWSYFRQIA 179
H N+VE+ +++ G EL++V+E + G L ++ R + +A CL +
Sbjct: 79 QHENVVEMYNSYLV--GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA------VL 130
Query: 180 AALQYVHSRRILHR 193
AL +H++ ++HR
Sbjct: 131 QALSVLHAQGVIHR 144
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
+GTPY+M+PE + L Y D+WSLG ++ EMV + P+F++
Sbjct: 187 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 230
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE-VDSFLGTPYYMSPERLKELK 63
+GTPY+M+PE + L Y D+WSLG ++ E VD G P Y + LK +K
Sbjct: 187 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD---GEPPYFNEPPLKAMK 237
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAE-CLVWSYFRQIA 179
H N+VE+ +++ G EL++V+E + G L ++ R + +A CL +
Sbjct: 86 QHENVVEMYNSYLV--GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA------VL 137
Query: 180 AALQYVHSRRILHR 193
AL +H++ ++HR
Sbjct: 138 QALSVLHAQGVIHR 151
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+F GTP Y++PE L+ Y F D W+LG +++EM+A +SPF
Sbjct: 212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
+HP +V L S F + S LF V+E + GDL + RQ+K L E Y +I+
Sbjct: 111 NHPFLVGLHSCFQTES--RLFFVIEYVNGGDLMFHMQ--RQRK--LPEEHARFYSAEISL 164
Query: 181 ALQYVHSRRILHR 193
AL Y+H R I++R
Sbjct: 165 ALNYLHERGIIYR 177
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ +F GTP Y++PE L+ Y F D W+LG +++E+
Sbjct: 208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 246
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
+GTPY+M+PE + L Y D+WSLG ++ EMV + P+F++
Sbjct: 185 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 228
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE-VDSFLGTPYYMSPERLKELK 63
+GTPY+M+PE + L Y D+WSLG ++ E VD G P Y + LK +K
Sbjct: 185 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD---GEPPYFNEPPLKAMK 235
Score = 33.9 bits (76), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAE-CLVWSYFRQIA 179
H N+VE+ +++ G EL++V+E + G L ++ R + +A CL +
Sbjct: 84 QHENVVEMYNSYLV--GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA------VL 135
Query: 180 AALQYVHSRRILHR 193
AL +H++ ++HR
Sbjct: 136 QALSVLHAQGVIHR 149
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
+GTPY+M+PE + L Y D+WSLG ++ EMV + P+F++
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 219
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE-VDSFLGTPYYMSPERLKELK 63
+GTPY+M+PE + L Y D+WSLG ++ E VD G P Y + LK +K
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD---GEPPYFNEPPLKAMK 226
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAE-CLVWSYFRQIA 179
H N+VE+ +++ G EL++V+E + G L ++ R + +A CL +
Sbjct: 75 QHENVVEMYNSYLV--GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA------VL 126
Query: 180 AALQYVHSRRILHR 193
AL +H++ ++HR
Sbjct: 127 QALSVLHAQGVIHR 140
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
+GTPY+M+PE + L Y D+WSLG ++ EM+ + P+F++
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 244
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE-VDSFLGTPYYMSP--ERLKELKYSFP 67
+GTPY+M+PE + L Y D+WSLG ++ E +D PY+ P + ++ ++ S P
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG--EPPYFNEPPLQAMRRIRDSLP 258
Query: 68 SDVWSL 73
V L
Sbjct: 259 PRVKDL 264
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAE-CLVWSYFR 176
+ HH N+V++ S++ G EL++V+E + G L ++ R + +A CL
Sbjct: 97 RDYHHDNVVDMYSSYLV--GDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCL------ 148
Query: 177 QIAAALQYVHSRRILHR 193
+ AL Y+H++ ++HR
Sbjct: 149 SVLRALSYLHNQGVIHR 165
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
+GTPY+M+PE + L Y D+WSLG ++ EMV + P+F++
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 350
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE-VDSFLGTPYYMSPERLKELK 63
+GTPY+M+PE + L Y D+WSLG ++ E VD G P Y + LK +K
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD---GEPPYFNEPPLKAMK 357
Score = 33.5 bits (75), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAE-CLVWSYFRQIA 179
H N+VE+ +++ G EL++V+E + G L ++ R + +A CL +
Sbjct: 206 QHENVVEMYNSYLV--GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA------VL 257
Query: 180 AALQYVHSRRILHR 193
AL +H++ ++HR
Sbjct: 258 QALSVLHAQGVIHR 271
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
+GTPY+M+PE + L Y D+WSLG ++ EMV + P+F++
Sbjct: 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 273
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE-VDSFLGTPYYMSPERLKELK 63
+GTPY+M+PE + L Y D+WSLG ++ E VD G P Y + LK +K
Sbjct: 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD---GEPPYFNEPPLKAMK 280
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAE-CLVWSYFRQIA 179
H N+VE+ +++ G EL++V+E + G L ++ R + +A CL +
Sbjct: 129 QHENVVEMYNSYLV--GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA------VL 180
Query: 180 AALQYVHSRRILHR 193
AL +H++ ++HR
Sbjct: 181 QALSVLHAQGVIHR 194
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
S +SF+GT YMSPERL+ YS SD+WS+G L E+ +G Y + P KEL+
Sbjct: 220 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM--AVGR-YPIPPPDAKELELM 276
Query: 66 F 66
F
Sbjct: 277 F 277
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+SF+GT YMSPERL+ YS SD+WS+G L EM + P
Sbjct: 222 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
F GTP Y++PE L+ Y F D W+LG +++EM+A +SPF
Sbjct: 181 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
+HP +V L S F + S LF V+E + GDL + RQ+K L E Y +I+
Sbjct: 79 NHPFLVGLHSCFQTES--RLFFVIEYVNGGDLMFHMQ--RQRK--LPEEHARFYSAEISL 132
Query: 181 ALQYVHSRRILHR 193
AL Y+H R I++R
Sbjct: 133 ALNYLHERGIIYR 145
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ F GTP Y++PE L+ Y F D W+LG +++E+
Sbjct: 176 DTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 214
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HPNIV+L + + L+LV+E A G++ ++A R K E + FR
Sbjct: 69 KILNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR 121
Query: 177 QIAAALQYVHSRRILHRGERETFLSVLGD 205
QI +A+QY H + I+HR + L + GD
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDGD 150
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 39 CVLYEVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHIS 93
V ++D+F G+P Y +PE + KY P DVWSLG +LY +V+ PF +++
Sbjct: 165 TVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 220
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
+ +D+F G+P Y +PE + KY P DVWSLG +LY + S F G ER+
Sbjct: 168 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227
Query: 61 ELKYSFP 67
KY P
Sbjct: 228 RGKYRIP 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
F GTP Y++PE L+ Y F D W+LG +++EM+A +SPF
Sbjct: 166 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
+HP +V L S F + S LF V+E + GDL + RQ+K L E Y +I+
Sbjct: 64 NHPFLVGLHSCFQTES--RLFFVIEYVNGGDLMFHMQ--RQRK--LPEEHARFYSAEISL 117
Query: 181 ALQYVHSRRILHR 193
AL Y+H R I++R
Sbjct: 118 ALNYLHERGIIYR 130
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ F GTP Y++PE L+ Y F D W+LG +++E+
Sbjct: 161 DTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 199
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
F GTP Y++PE L+ Y F D W+LG +++EM+A +SPF
Sbjct: 170 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
+HP +V L S F + S LF V+E + GDL + RQ+K L E Y +I+
Sbjct: 68 NHPFLVGLHSCFQTES--RLFFVIEYVNGGDLMFHMQ--RQRK--LPEEHARFYSAEISL 121
Query: 181 ALQYVHSRRILHR 193
AL Y+H R I++R
Sbjct: 122 ALNYLHERGIIYR 134
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ F GTP Y++PE L+ Y F D W+LG +++E+
Sbjct: 165 DTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 203
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + +SF+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 184 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 243
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 244 IKLEYDFPEKFF 255
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+SF+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 188 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 86 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 139
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 140 SALEYLHGKGIIHR 153
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE L + +SF DVWS+GC++Y + +G P + + R+K+ +YS
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL--LVGKPPFETSCLKETYLRIKKNEYSI 234
Query: 67 PSDVWSLGCVLYEMVALQSP 86
P + + L + + P
Sbjct: 235 PKHINPVAASLIQKMLQTDP 254
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
GTP Y++PE L + +SF DVWS+GC++Y ++ + PF
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
++L H ++V F +F+VLEL + L E +++ L E Y RQ
Sbjct: 70 RSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLL----ELHKRRKALTEPEARYYLRQ 123
Query: 178 IAAALQYVHSRRILHR 193
I QY+H R++HR
Sbjct: 124 IVLGCQYLHRNRVIHR 139
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELK 63
+ GTP Y++PE L + +SF DVWS+GC++Y + +G P + + R+K+ +
Sbjct: 180 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL--LVGKPPFETSCLKETYLRIKKNE 237
Query: 64 YSFPSDVWSLGCVLYEMVALQSP 86
YS P + + L + + P
Sbjct: 238 YSIPKHINPVAASLIQKMLQTDP 260
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ GTP Y++PE L + +SF DVWS+GC++Y ++ + PF
Sbjct: 180 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
++L H ++V F +F+VLEL + L E +++ L E Y RQ
Sbjct: 76 RSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLL----ELHKRRKALTEPEARYYLRQ 129
Query: 178 IAAALQYVHSRRILHR 193
I QY+H R++HR
Sbjct: 130 IVLGCQYLHRNRVIHR 145
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE L + +SF DVWS+GC++Y + +G P + + R+K+ +YS
Sbjct: 201 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL--LVGKPPFETSCLKETYLRIKKNEYSI 258
Query: 67 PSDVWSLGCVLYEMVALQSP 86
P + + L + + P
Sbjct: 259 PKHINPVAASLIQKMLQTDP 278
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
GTP Y++PE L + +SF DVWS+GC++Y ++ + PF
Sbjct: 201 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
++L H ++V F +F+VLEL + L E +++ L E Y RQ
Sbjct: 94 RSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLL----ELHKRRKALTEPEARYYLRQ 147
Query: 178 IAAALQYVHSRRILHR 193
I QY+H R++HR
Sbjct: 148 IVLGCQYLHRNRVIHR 163
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELK 63
+ GTP Y++PE L + +SF DVWS+GC++Y + +G P + + R+K+ +
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL--LVGKPPFETSCLKETYLRIKKNE 233
Query: 64 YSFPSDVWSLGCVLYEMVALQSP 86
YS P + + L + + P
Sbjct: 234 YSIPKHINPVAASLIQKMLQTDP 256
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ GTP Y++PE L + +SF DVWS+GC++Y ++ + PF
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
++L H ++V F +F+VLEL + L E +++ L E Y RQ
Sbjct: 72 RSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLL----ELHKRRKALTEPEARYYLRQ 125
Query: 178 IAAALQYVHSRRILHR 193
I QY+H R++HR
Sbjct: 126 IVLGCQYLHRNRVIHR 141
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELK 63
+ GTP Y++PE L + +SF DVWS+GC++Y + +G P + + R+K+ +
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL--LVGKPPFETSCLKETYLRIKKNE 233
Query: 64 YSFPSDVWSLGCVLYEMVALQSP 86
YS P + + L + + P
Sbjct: 234 YSIPKHINPVAASLIQKMLQTDP 256
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ GTP Y++PE L + +SF DVWS+GC++Y ++ + PF
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
++L H ++V F +F+VLEL + L E +++ L E Y RQ
Sbjct: 72 RSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLL----ELHKRRKALTEPEARYYLRQ 125
Query: 178 IAAALQYVHSRRILHR 193
I QY+H R++HR
Sbjct: 126 IVLGCQYLHRNRVIHR 141
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+SF+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 192 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + +SF+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 188 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 247
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 248 IKLEYDFPEKFF 259
Score = 33.9 bits (76), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 90 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 143
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 144 SALEYLHGKGIIHR 157
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
LHHPNI+ L + F R + ++L+LE A +G+L + QK C E + ++A
Sbjct: 80 LHHPNILRLYNYFYDR--RRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELA 133
Query: 180 AALQYVHSRRILHR 193
AL Y H ++++HR
Sbjct: 134 DALMYCHGKKVIHR 147
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISL 94
WS+ + GT Y+ PE ++ ++ D+W +G + YE++ PF S S
Sbjct: 169 WSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESA--SH 226
Query: 95 NGLCKRI---EMALFPPLPSGV--LYSDKTLHHPN 124
N +RI ++ +P+G L S H+P+
Sbjct: 227 NETYRRIVKVDLKFPASVPTGAQDLISKLLRHNPS 261
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GT Y+ PE ++ ++ D+W +G + YE+ +G P + S R+ ++ F
Sbjct: 183 GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYEL--LVGNPPFESASHNETYRRIVKVDLKF 240
Query: 67 PSDV 70
P+ V
Sbjct: 241 PASV 244
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP+IVEL ++S L++V E D DL I + +E + Y RQI
Sbjct: 83 LKHPHIVELLETYSSDG--MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 180 AALQYVHSRRILHR 193
AL+Y H I+HR
Sbjct: 141 EALRYCHDNNIIHR 154
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKE----LKYSFP 67
+GTP++M+PE +K Y P DVW G +L+ + S P+Y + ERL E KY
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGC-LPFYGTKERLFEGIIKGKYKMN 252
Query: 68 SDVWS 72
WS
Sbjct: 253 PRQWS 257
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF-SKHISLNGLCK 99
+GTP++M+PE +K Y P DVW G +L+ +++ PF+ +K G+ K
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 246
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE L + +SF DVWS+GC++Y + +G P + + R+K+ +YS
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL--LVGKPPFETSCLKETYLRIKKNEYSI 260
Query: 67 PSDVWSLGCVLYEMVALQSP 86
P + + L + + P
Sbjct: 261 PKHINPVAASLIQKMLQTDP 280
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
GTP Y++PE L + +SF DVWS+GC++Y ++ + PF
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
++L H ++V F +F+VLEL + L E +++ L E Y RQ
Sbjct: 96 RSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLL----ELHKRRKALTEPEARYYLRQ 149
Query: 178 IAAALQYVHSRRILHR 193
I QY+H R++HR
Sbjct: 150 IVLGCQYLHRNRVIHR 165
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 23 LKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+K + + + G + + + +GT Y+SPE+ + SDV+SLGCVLYE++
Sbjct: 172 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
Query: 83 LQSPF 87
+ PF
Sbjct: 232 GEPPF 236
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ +GT Y+SPE+ + SDV+SLGCVLYEV
Sbjct: 195 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 229
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP+IVEL ++S L++V E D DL I + +E + Y RQI
Sbjct: 85 LKHPHIVELLETYSSDG--MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 142
Query: 180 AALQYVHSRRILHR 193
AL+Y H I+HR
Sbjct: 143 EALRYCHDNNIIHR 156
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKE----LKYSFP 67
+GTP++M+PE +K Y P DVW G +L+ + S P+Y + ERL E KY
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGC-LPFYGTKERLFEGIIKGKYKMN 254
Query: 68 SDVWS 72
WS
Sbjct: 255 PRQWS 259
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF-SKHISLNGLCK 99
+GTP++M+PE +K Y P DVW G +L+ +++ PF+ +K G+ K
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 248
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 23 LKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+K + + + G + + + +GT Y+SPE+ + SDV+SLGCVLYE++
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 83 LQSPF 87
+ PF
Sbjct: 215 GEPPF 219
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +GT Y+SPE+ + SDV+SLGCVLYEV G P +
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV--LTGEPPF 219
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP+IVEL ++S L++V E D DL I + +E + Y RQI
Sbjct: 83 LKHPHIVELLETYSSDG--MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 180 AALQYVHSRRILHR 193
AL+Y H I+HR
Sbjct: 141 EALRYCHDNNIIHR 154
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKE----LKYSFP 67
+GTP++M+PE +K Y P DVW G +L+ + S P+Y + ERL E KY
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGC-LPFYGTKERLFEGIIKGKYKMN 252
Query: 68 SDVWS 72
WS
Sbjct: 253 PRQWS 257
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF-SKHISLNGLCK 99
+GTP++M+PE +K Y P DVW G +L+ +++ PF+ +K G+ K
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 246
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
F GTP Y+SPE LK+ YS P D+W+ G +LY + +G P + + ++K
Sbjct: 189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL--LVGYPPFWDEDQHRLYAQIKAGA 246
Query: 64 YSFPSDVWS 72
Y +PS W
Sbjct: 247 YDYPSPEWD 255
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y+SPE LK+ YS P D+W+ G +LY ++ PF+ +
Sbjct: 189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 233
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
+ L HPNIV L + S +LV +L G+L ++A + + C+ +
Sbjct: 83 RKLQHPNIVRLHDSIQEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCI-----Q 135
Query: 177 QIAAALQYVHSRRILHRG 194
QI ++ Y HS I+HR
Sbjct: 136 QILESIAYCHSNGIVHRN 153
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 23 LKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+K + + + G + + + +GT Y+SPE+ + SDV+SLGCVLYE++
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 83 LQSPF 87
+ PF
Sbjct: 215 GEPPF 219
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +GT Y+SPE+ + SDV+SLGCVLYEV G P +
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV--LTGEPPF 219
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 23 LKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+K + + + G + + + +GT Y+SPE+ + SDV+SLGCVLYE++
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 83 LQSPF 87
+ PF
Sbjct: 215 GEPPF 219
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +GT Y+SPE+ + SDV+SLGCVLYEV G P +
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV--LTGEPPF 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 23 LKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+K + + + G + + + +GT Y+SPE+ + SDV+SLGCVLYE++
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 83 LQSPF 87
+ PF
Sbjct: 215 GEPPF 219
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +GT Y+SPE+ + SDV+SLGCVLYEV G P +
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV--LTGEPPF 219
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ + F GTP Y++PE L KY+ D WS G +LYEM+ QSPF
Sbjct: 175 KTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ + F GTP Y++PE L KY+ D WS G +LYE+
Sbjct: 174 AKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 212
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
HP + + F ++ + LF V+E + GDL I C K L+ Y +I
Sbjct: 78 HPFLTHMFCTFQTK--ENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATF--YAAEIILG 131
Query: 182 LQYVHSRRILHR 193
LQ++HS+ I++R
Sbjct: 132 LQFLHSKGIVYR 143
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
F GTP Y+SPE LK+ YS P D+W+ G +LY + +G P + + ++K
Sbjct: 165 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL--LVGYPPFWDEDQHRLYAQIKAGA 222
Query: 64 YSFPSDVWS 72
Y +PS W
Sbjct: 223 YDYPSPEWD 231
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y+SPE LK+ YS P D+W+ G +LY ++ PF+ +
Sbjct: 165 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 209
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
+ L HPNIV L + S +LV +L G+L ++A + + C+ +
Sbjct: 59 RKLQHPNIVRLHDSIQEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCI-----Q 111
Query: 177 QIAAALQYVHSRRILHRG 194
QI ++ Y HS I+HR
Sbjct: 112 QILESIAYCHSNGIVHRN 129
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
F GTP Y+SPE LK+ YS P D+W+ G +LY + +G P + + ++K
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL--LVGYPPFWDEDQHRLYAQIKAGA 223
Query: 64 YSFPSDVWS 72
Y +PS W
Sbjct: 224 YDYPSPEWD 232
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y+SPE LK+ YS P D+W+ G +LY ++ PF+ +
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
Score = 33.9 bits (76), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
+ L HPNIV L + S +LV +L G+L ++A + + C+ +
Sbjct: 60 RKLQHPNIVRLHDSIQEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCI-----Q 112
Query: 177 QIAAALQYVHSRRILHRG 194
QI ++ Y HS I+HR
Sbjct: 113 QILESIAYCHSNGIVHRN 130
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ GTP Y++PE L + +SF D+WSLGC+LY ++ + PF
Sbjct: 201 TLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELK 63
+ GTP Y++PE L + +SF D+WSLGC+LY + +G P + + R+K+ +
Sbjct: 201 TLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL--LVGKPPFETSCLKETYIRIKKNE 258
Query: 64 YSFPSDVWSLGCVLYEMVALQSP 86
YS P + + L + P
Sbjct: 259 YSVPRHINPVASALIRRMLHADP 281
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L +P++V F +++VLE+ + L E +++ + E + RQ
Sbjct: 97 KSLDNPHVVGFHGFF--EDDDFVYVVLEICRRRSLL----ELHKRRKAVTEPEARYFMRQ 150
Query: 178 IAAALQYVHSRRILHR 193
+QY+H+ R++HR
Sbjct: 151 TIQGVQYLHNNRVIHR 166
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
GTP Y++PE L + +SF D+WSLGC+LY ++ + PF
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE L + +SF D+WSLGC+LY + +G P + + R+K+ +YS
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL--LVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 67 PSDVWSLGCVLYEMVALQSP 86
P + + L + P
Sbjct: 262 PRHINPVASALIRRMLHADP 281
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L +P++V F +++VLE+ + L E +++ + E + RQ
Sbjct: 97 KSLDNPHVVGFHGFF--EDDDFVYVVLEICRRRSLL----ELHKRRKAVTEPEARYFMRQ 150
Query: 178 IAAALQYVHSRRILHR 193
+QY+H+ R++HR
Sbjct: 151 TIQGVQYLHNNRVIHR 166
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ + F GTP Y++PE L KY+ D WS G +LYEM+ QSPF
Sbjct: 174 KTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ + F GTP Y++PE L KY+ D WS G +LYE+
Sbjct: 173 AKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 211
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
HP + + F ++ + LF V+E + GDL I C + A Y +I
Sbjct: 77 HPFLTHMFCTFQTK--ENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF----YAAEIILG 130
Query: 182 LQYVHSRRILHR 193
LQ++HS+ I++R
Sbjct: 131 LQFLHSKGIVYR 142
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
GTP Y++PE L + +SF D+WSLGC+LY ++ + PF
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE L + +SF D+WSLGC+LY + +G P + + R+K+ +YS
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL--LVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 67 PSDVWSLGCVLYEMVALQSP 86
P + + L + P
Sbjct: 262 PRHINPVASALIRRMLHADP 281
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L +P++V F +++VLE+ + L E +++ + E + RQ
Sbjct: 97 KSLDNPHVVGFHGFF--EDDDFVYVVLEICRRRSLL----ELHKRRKAVTEPEARYFMRQ 150
Query: 178 IAAALQYVHSRRILHR 193
+QY+H+ R++HR
Sbjct: 151 TIQGVQYLHNNRVIHR 166
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
GTP Y++PE L + +SF D+WSLGC+LY ++ + PF
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE L + +SF D+WSLGC+LY + +G P + + R+K+ +YS
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL--LVGKPPFETSCLKETYIRIKKNEYSV 245
Query: 67 PSDVWSLGCVLYEMVALQSP 86
P + + L + P
Sbjct: 246 PRHINPVASALIRRMLHADP 265
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L +P++V F +++VLE+ + L E +++ + E + RQ
Sbjct: 81 KSLDNPHVVGFHGFF--EDDDFVYVVLEICRRRSLL----ELHKRRKAVTEPEARYFMRQ 134
Query: 178 IAAALQYVHSRRILHR 193
+QY+H+ R++HR
Sbjct: 135 TIQGVQYLHNNRVIHR 150
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+ F+GTP++M+PE +K+ Y F +D+WSLG E+ + P
Sbjct: 174 NXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ F+GTP++M+PE +K+ Y F +D+WSLG E+
Sbjct: 174 NXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 209
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
F GTP Y+SPE LK+ YS P D+W+ G +LY + +G P + + ++K
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL--LVGYPPFWDEDQHRLYAQIKAGA 223
Query: 64 YSFPSDVWS 72
Y +PS W
Sbjct: 224 YDYPSPEWD 232
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y+SPE LK+ YS P D+W+ G +LY ++ PF+ +
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
+ L HPNIV L + S +LV +L G+L ++A + + C+ +
Sbjct: 60 RKLQHPNIVRLHDSIQEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCI-----Q 112
Query: 177 QIAAALQYVHSRRILHRG 194
QI ++ Y HS I+HR
Sbjct: 113 QILESIAYCHSNGIVHRN 130
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 23 LKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+K + + + G + + + +GT Y+SPE+ + SDV+SLGCVLYE++
Sbjct: 155 VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 83 LQSPF 87
+ PF
Sbjct: 215 GEPPF 219
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +GT Y+SPE+ + SDV+SLGCVLYEV G P +
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV--LTGEPPF 219
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
+GTPY+M+PE + Y+ D+WSLG ++ EMV + P+FS
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS 243
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE-VDSFLGTPYYMSPERLKELK 63
+GTPY+M+PE + Y+ D+WSLG ++ E VD G P Y S ++ +K
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD---GEPPYFSDSPVQAMK 251
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
H N+VE+ ++ G+EL++++E G L ++++ R L E + + +
Sbjct: 100 QHFNVVEMYKSYLV--GEELWVLMEFLQGGALTDIVSQVR-----LNEEQIATVCEAVLQ 152
Query: 181 ALQYVHSRRILHR 193
AL Y+H++ ++HR
Sbjct: 153 ALAYLHAQGVIHR 165
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 29/131 (22%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
F GTP Y+SPE L++ Y P D+W+ G +LY + +G P + + ++K
Sbjct: 192 GFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYIL--LVGYPPFWDEDQHKLYQQIKAGA 249
Query: 64 YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHP 123
Y FPS W + ++ +++N P+ + +D+ L HP
Sbjct: 250 YDFPSPEWDT------VTPEAKNLINQMLTIN--------------PAKRITADQALKHP 289
Query: 124 NIVELRSAFAS 134
+ + RS AS
Sbjct: 290 WVCQ-RSTVAS 299
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
+ L HPNIV L + + +LV +L G+L ++A + + C+
Sbjct: 85 RLLKHPNIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCI-----H 137
Query: 177 QIAAALQYVHSRRILHRGERETFLSVLGDC 206
QI ++ ++H I+HR + L + C
Sbjct: 138 QILESVNHIHQHDIVHRDLKPENLLLASKC 167
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
F GTP Y+SPE L++ Y P D+W+ G +LY + +G P + + ++K
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYIL--LVGYPPFWDEDQHKLYQQIKAGA 222
Query: 64 YSFPSDVWS 72
Y FPS W
Sbjct: 223 YDFPSPEWD 231
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y+SPE L++ Y P D+W+ G +LY ++ PF+ +
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDE 209
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+ F+GT YMSPERL+ YS SD+WS+G L EM + P
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ F+GT YMSPERL+ YS SD+WS+G L E+
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 199
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + ++F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 185 KQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 244
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 245 IKLEYDFPEKFF 256
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
++F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 189 ANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
Score = 33.5 bits (75), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 87 LDHPFFVKLYFTF--QDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 140
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 141 SALEYLHGKGIIHR 154
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 191 ANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE-----R 58
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + L P+ E +
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGL-PPFRAGNEGLIFAK 245
Query: 59 LKELKYSFPSDVW 71
+ +L+Y FP +
Sbjct: 246 IIKLEYDFPEKFF 258
Score = 33.9 bits (76), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 89 LDHPFFVKLYFTF--QDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 142
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 143 SALEYLHGKGIIHR 156
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HPNIV+L + + L+LV+E A G++ ++A R K E + FR
Sbjct: 68 KVLNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR 120
Query: 177 QIAAALQYVHSRRILHR 193
QI +A+QY H + I+HR
Sbjct: 121 QIVSAVQYCHQKFIVHR 137
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHIS 93
++D+F G+P Y +PE + KY P DVWSLG +LY +V+ PF +++
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
+ +D+F G+P Y +PE + KY P DVWSLG +LY + S F G ER+
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 61 ELKYSFP 67
KY P
Sbjct: 227 RGKYRIP 233
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HPNIV+L + + L+LV+E A G++ ++A R K E + FR
Sbjct: 68 KVLNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR 120
Query: 177 QIAAALQYVHSRRILHR 193
QI +A+QY H + I+HR
Sbjct: 121 QIVSAVQYCHQKFIVHR 137
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHIS 93
++D+F G+P Y +PE + KY P DVWSLG +LY +V+ PF +++
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
+ +D+F G+P Y +PE + KY P DVWSLG +LY + S F G ER+
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 61 ELKYSFP 67
KY P
Sbjct: 227 RGKYRIP 233
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
+ +GTP++M+PE ++E+ Y+ +D+WSLG EM + P+ H
Sbjct: 183 NXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH 229
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +GTP++M+PE ++E+ Y+ +D+WSLG E+ G P Y
Sbjct: 183 NXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAE--GKPPY 225
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HPNIV+L + + L+LV+E A G++ ++A R K E + FR
Sbjct: 68 KVLNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR 120
Query: 177 QIAAALQYVHSRRILHR 193
QI +A+QY H + I+HR
Sbjct: 121 QIVSAVQYCHQKFIVHR 137
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHIS 93
++D+F G P Y +PE + KY P DVWSLG +LY +V+ PF +++
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
+ +D+F G P Y +PE + KY P DVWSLG +LY + S F G ER+
Sbjct: 167 NKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 61 ELKYSFP 67
KY P
Sbjct: 227 RGKYRIP 233
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HPNIV+L + + L+LV+E A G++ ++A R K E + FR
Sbjct: 68 KVLNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR 120
Query: 177 QIAAALQYVHSRRILHR 193
QI +A+QY H + I+HR
Sbjct: 121 QIVSAVQYCHQKFIVHR 137
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHIS 93
++D+F G+P Y +PE + KY P DVWSLG +LY +V+ PF +++
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
+ +D+F G+P Y +PE + KY P DVWSLG +LY + S F G ER+
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 61 ELKYSFP 67
KY P
Sbjct: 227 RGKYRIP 233
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HPNIV+L + + L+LV+E A G++ ++A R K E + FR
Sbjct: 68 KVLNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR 120
Query: 177 QIAAALQYVHSRRILHR 193
QI +A+QY H + I+HR
Sbjct: 121 QIVSAVQYCHQKFIVHR 137
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHIS 93
++D F G+P Y +PE + KY P DVWSLG +LY +V+ PF +++
Sbjct: 168 KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
+ +D F G+P Y +PE + KY P DVWSLG +LY + S F G ER+
Sbjct: 167 NKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 61 ELKYSFP 67
KY P
Sbjct: 227 RGKYRIP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 190 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 249
Query: 60 KELKYSFPS 68
+L+Y FP+
Sbjct: 250 IKLEYDFPA 258
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 194 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 92 LDHPFFVKLYFTF--QDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 145
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 146 SALEYLHGKGIIHR 159
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
+ +F GTP Y++PE L++ Y D W LG V+YEM+ + PF+++
Sbjct: 306 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 352
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+++ +F GTP Y++PE L++ Y D W LG V+YE+
Sbjct: 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 342
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
+ +F GTP Y++PE L++ Y D W LG V+YEM+ + PF+++
Sbjct: 309 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 355
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+++ +F GTP Y++PE L++ Y D W LG V+YE+
Sbjct: 307 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 345
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 184 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 243
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 244 IKLEYDFPEKFF 255
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 188 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 86 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 139
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 140 SALEYLHGKGIIHR 153
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE-----R 58
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + L P+ E +
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL-PPFRAGNEGLIFAK 245
Query: 59 LKELKYSFPSDVW 71
+ +L+Y FP +
Sbjct: 246 IIKLEYDFPEKFF 258
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 89 LDHPFFVKLYFTF--QDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 142
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 143 SALEYLHGKGIIHR 156
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 169 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 228
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 229 IKLEYDFPEKFF 240
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 173 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
Score = 33.5 bits (75), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 71 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 124
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 125 SALEYLHGKGIIHR 138
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
+F GTP Y++PE L++ Y D W LG V+YEM+ + PF+++
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+++ +F GTP Y++PE L++ Y D W LG V+YE+ Y ERL EL
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP + L+ AF + L V+E A+ G+L ++ R E Y +
Sbjct: 60 QNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 113
Query: 178 IAAALQYVHSRRILHR 193
I +AL+Y+HSR +++R
Sbjct: 114 IVSALEYLHSRDVVYR 129
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 41 LYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
L ++ + +GT YY +PER E ++ +D+++L CVLYE + P+ +S+ G
Sbjct: 189 LTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXG--AH 246
Query: 101 IEMALFPPLPSGV 113
I A+ P PS V
Sbjct: 247 INQAI--PRPSTV 257
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS 55
K + + + +GT YY +PER E ++ +D+++L CVLYE G+P Y
Sbjct: 188 KLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYEC--LTGSPPYQG 237
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
TPYY++PE L KY D+WSLG ++Y ++ PF+S H ++++ G+ RI M +
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 254
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-------MSP---ERLKELK 63
TPYY++PE L KY D+WSLG ++Y + G P + +SP R++ +
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKTRIRMGQ 253
Query: 64 YSFPSDVWS 72
Y FP+ WS
Sbjct: 254 YEFPNPEWS 262
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 246
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 247 IKLEYDFPEKFF 258
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 89 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 142
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 143 SALEYLHGKGIIHR 156
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 246
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 247 IKLEYDFPEKFF 258
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
Score = 33.5 bits (75), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 89 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 142
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 143 SALEYLHGKGIIHR 156
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 244
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 245 IKLEYDFPEKFF 256
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 87 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 140
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 141 SALEYLHGKGIIHR 154
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 244
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 245 IKLEYDFPEKFF 256
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 87 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 140
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 141 SALEYLHGKGIIHR 154
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
+F GTP Y++PE L++ Y D W LG V+YEM+ + PF+++
Sbjct: 167 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 211
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+++ +F GTP Y++PE L++ Y D W LG V+YE+ Y ERL EL
Sbjct: 163 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 219
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP + L+ AF + L V+E A+ G+L ++ R E Y +
Sbjct: 63 QNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 116
Query: 178 IAAALQYVHSRRILHR 193
I +AL+Y+HSR +++R
Sbjct: 117 IVSALEYLHSRDVVYR 132
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 244
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 245 IKLEYDFPEKFF 256
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 87 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 140
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 141 SALEYLHGKGIIHR 154
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
TPYY++PE L KY D+WSLG ++Y ++ PF+S H ++++ G+ RI M +
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 238
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-------MSP---ERLKELK 63
TPYY++PE L KY D+WSLG ++Y + G P + +SP R++ +
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKTRIRMGQ 237
Query: 64 YSFPSDVWS 72
Y FP+ WS
Sbjct: 238 YEFPNPEWS 246
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
TPYY++PE L KY D+WSLG ++Y ++ PF+S H ++++ G+ RI M +
Sbjct: 232 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 290
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-------MSP---ERLKELK 63
TPYY++PE L KY D+WSLG ++Y + G P + +SP R++ +
Sbjct: 232 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKTRIRMGQ 289
Query: 64 YSFPSDVWS 72
Y FP+ WS
Sbjct: 290 YEFPNPEWS 298
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
TPYY++PE L KY D+WSLG ++Y ++ PF+S H ++++ G+ RI M +
Sbjct: 181 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 239
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-------MSP---ERLKELK 63
TPYY++PE L KY D+WSLG ++Y + G P + +SP R++ +
Sbjct: 181 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKTRIRMGQ 238
Query: 64 YSFPSDVWS 72
Y FP+ WS
Sbjct: 239 YEFPNPEWS 247
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 192 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 188 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 247
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 248 IKLEYDFPEKFF 259
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 90 LDHPFFVKLYFTF--QDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 143
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 144 SALEYLHGKGIIHR 157
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
+F GTP Y++PE L++ Y D W LG V+YEM+ + PF+++
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+++ +F GTP Y++PE L++ Y D W LG V+YE+ Y ERL EL
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP + L+ AF + L V+E A+ G+L ++ R E Y +
Sbjct: 60 QNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 113
Query: 178 IAAALQYVHSRRILHR 193
I +AL+Y+HSR +++R
Sbjct: 114 IVSALEYLHSRDVVYR 129
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
TPYY++PE L KY D+WSLG ++Y ++ PF+S H ++++ G+ RI M +
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 238
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-------MSP---ERLKELK 63
TPYY++PE L KY D+WSLG ++Y + G P + +SP R++ +
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKTRIRMGQ 237
Query: 64 YSFPSDVWS 72
Y FP+ WS
Sbjct: 238 YEFPNPEWS 246
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 246
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 247 IKLEYDFPEKFF 258
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 89 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 142
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 143 SALEYLHGKGIIHR 156
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
TPYY++PE L KY D+WSLG ++Y ++ PF+S H ++++ G+ RI M +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 240
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-------MSP---ERLKELK 63
TPYY++PE L KY D+WSLG ++Y + G P + +SP R++ +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKTRIRMGQ 239
Query: 64 YSFPSDVWS 72
Y FP+ WS
Sbjct: 240 YEFPNPEWS 248
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 192 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 251
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 252 IKLEYDFPEKFF 263
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 196 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 94 LDHPFFVKLYFCF--QDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 147
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 148 SALEYLHGKGIIHR 161
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
TPYY++PE L KY D+WSLG ++Y ++ PF+S H ++++ G+ RI M +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 240
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-------MSP---ERLKELK 63
TPYY++PE L KY D+WSLG ++Y + G P + +SP R++ +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKTRIRMGQ 239
Query: 64 YSFPSDVWS 72
Y FP+ WS
Sbjct: 240 YEFPNPEWS 248
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
TPYY++PE L KY D+WSLG ++Y ++ PF+S H ++++ G+ RI M +
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 284
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-------MSP---ERLKELK 63
TPYY++PE L KY D+WSLG ++Y + G P + +SP R++ +
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKTRIRMGQ 283
Query: 64 YSFPSDVWS 72
Y FP+ WS
Sbjct: 284 YEFPNPEWS 292
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
TPYY++PE L KY D+WSLG ++Y ++ PF+S H ++++ G+ RI M +
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 246
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-------MSP---ERLKELK 63
TPYY++PE L KY D+WSLG ++Y + G P + +SP R++ +
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKTRIRMGQ 245
Query: 64 YSFPSDVWS 72
Y FP+ WS
Sbjct: 246 YEFPNPEWS 254
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
TPYY++PE L KY D+WSLG ++Y ++ PF+S H ++++ G+ RI M +
Sbjct: 186 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 244
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-------MSP---ERLKELK 63
TPYY++PE L KY D+WSLG ++Y + G P + +SP R++ +
Sbjct: 186 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKTRIRMGQ 243
Query: 64 YSFPSDVWS 72
Y FP+ WS
Sbjct: 244 YEFPNPEWS 252
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ + HPNI+ L F +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 84 REIRHPNIITLHDIFENKT--DVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQ 137
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS+RI H
Sbjct: 138 ILDGVHYLHSKRIAH 152
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
E + GTP +++PE + +D+WS+G + Y +++ SPF +
Sbjct: 188 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE 235
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 191 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 250
Query: 66 FPSDVWS 72
F + +S
Sbjct: 251 FDEEYFS 257
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+F GTP Y++PE L+E+ Y D W++G +LYEM+ +PF
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+F GTP Y++PE L+E+ Y D W++G +LYE+
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEM 217
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
+HP + +L F ++ LF V+E + GDL I QK E Y +I +
Sbjct: 82 NHPFLTQLFCCF--QTPDRLFFVMEFVNGGDLMFHI----QKSRRFDEARARFYAAEIIS 135
Query: 181 ALQYVHSRRILHR 193
AL ++H + I++R
Sbjct: 136 ALMFLHDKGIIYR 148
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
TPYY++PE L KY D+WSLG ++Y ++ PF+S H ++++ G+ RI M +
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 245
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-------MSP---ERLKELK 63
TPYY++PE L KY D+WSLG ++Y + G P + +SP R++ +
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKTRIRMGQ 244
Query: 64 YSFPSDVWS 72
Y FP+ WS
Sbjct: 245 YEFPNPEWS 253
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ + HPNI+ L F +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 63 REIRHPNIITLHDIFENKT--DVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQ 116
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS+RI H
Sbjct: 117 ILDGVHYLHSKRIAH 131
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
E + GTP +++PE + +D+WS+G + Y +++ SPF +
Sbjct: 167 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE 214
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 229
Query: 66 FPSDVWS 72
F + +S
Sbjct: 230 FDEEYFS 236
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVI-----AECRQKKCHLAECLVW 172
+ L HPN++ L+ F S + ++++L+ + A+ DL +I ++ +K L +V
Sbjct: 73 RELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVK 131
Query: 173 SYFRQIAAALQYVHSRRILHRGERETFLSVLGD 205
S QI + Y+H+ +LHR + + V+G+
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGE 164
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 41 LYEVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
L ++D + T +Y +PE L + Y+ D+W++GC+ E++ + F
Sbjct: 189 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 6 SSVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEV 44
+ +D + T +Y +PE L + Y+ D+W++GC+ E+
Sbjct: 190 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 166 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 162 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 221
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 222 IKLEYDFPEKFF 233
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 64 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 117
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 118 SALEYLHGKGIIHR 131
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 167 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 163 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 222
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 223 IKLEYDFPEKFF 234
Score = 33.5 bits (75), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 65 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 118
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 119 SALEYLHGKGIIHR 132
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ + HPNI+ L F +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 70 REIRHPNIITLHDIFENKT--DVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQ 123
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS+RI H
Sbjct: 124 ILDGVHYLHSKRIAH 138
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
E + GTP +++PE + +D+WS+G + Y +++ SPF +
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE 221
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 236
Query: 66 FPSDVWS 72
F + +S
Sbjct: 237 FDEEYFS 243
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 168 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 164 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 223
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 224 IKLEYDFPEKFF 235
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 66 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 119
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 120 SALEYLHGKGIIHR 133
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+ F+GT Y+SPE L E SD+W+LGC++Y++VA PF
Sbjct: 169 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
K + + F+GT Y+SPE L E SD+W+LGC++Y++ + F Y+ +++
Sbjct: 165 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 224
Query: 60 KELKYSFPSDVW 71
+L+Y FP +
Sbjct: 225 IKLEYDFPEKFF 236
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP V+L F + ++L+ L A G+L I +K E Y +I
Sbjct: 67 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 120
Query: 180 AALQYVHSRRILHR 193
+AL+Y+H + I+HR
Sbjct: 121 SALEYLHGKGIIHR 134
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHIS 93
++D+F G+P Y +PE + KY P DVWSLG +LY +V+ PF +++
Sbjct: 161 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 212
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HPNIV+L + + L+LV+E A G++ ++A K E + FR
Sbjct: 61 KVLNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGWMK-----EKEARAKFR 113
Query: 177 QIAAALQYVHSRRILHR 193
QI +A+QY H + I+HR
Sbjct: 114 QIVSAVQYCHQKFIVHR 130
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
+ +D+F G+P Y +PE + KY P DVWSLG +LY + S F G ER+
Sbjct: 160 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 219
Query: 61 ELKYSFP 67
KY P
Sbjct: 220 RGKYRIP 226
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y++PE L++ Y D W LG V+YEM+ + PF+++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+++ F GTP Y++PE L++ Y D W LG V+YE+ Y ERL EL
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP + L+ AF + L V+E A+ G+L ++ R E Y +
Sbjct: 60 QNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 113
Query: 178 IAAALQYVHSRRILHR 193
I +AL+Y+HSR +++R
Sbjct: 114 IVSALEYLHSRDVVYR 129
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y++PE L++ Y D W LG V+YEM+ + PF+++
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 213
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+++ F GTP Y++PE L++ Y D W LG V+YE+ Y ERL EL
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 221
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP + L+ AF + L V+E A+ G+L ++ R E Y +
Sbjct: 65 QNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 118
Query: 178 IAAALQYVHSRRILHR 193
I +AL+Y+HSR +++R
Sbjct: 119 IVSALEYLHSRDVVYR 134
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELK 63
F GTP Y+SPE L++ Y P D+W+ G +LY + +G P + +++K
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL--LVGYPPFWDEDQHRLYQQIKAGA 229
Query: 64 YSFPSDVWS 72
Y FPS W
Sbjct: 230 YDFPSPEWD 238
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y+SPE L++ Y P D+W+ G +LY ++ PF+ +
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE 216
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 29/131 (22%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
F GTP Y+SPE L++ Y P D+W+ G +LY + +G P + + ++K
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYIL--LVGYPPFWDEDQHRLYQQIKAGA 222
Query: 64 YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHP 123
Y FPS W + +K +++N P+ + + + L HP
Sbjct: 223 YDFPSPEWDT------VTPEAKDLINKMLTIN--------------PAKRITASEALKHP 262
Query: 124 NIVELRSAFAS 134
I + RS AS
Sbjct: 263 WICQ-RSTVAS 272
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
F GTP Y+SPE L++ Y P D+W+ G +LY + +G P + + ++K
Sbjct: 183 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL--LVGYPPFWDEDQHRLYQQIKAGA 240
Query: 64 YSFPSDVWS 72
Y FPS W
Sbjct: 241 YDFPSPEWD 249
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y+SPE L++ Y P D+W+ G +LY ++ PF+ +
Sbjct: 183 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE 227
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y++PE L++ Y D W LG V+YEM+ + PF+++
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 213
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+++ F GTP Y++PE L++ Y D W LG V+YE+
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 203
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y++PE L++ Y D W LG V+YEM+ + PF+++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+++ F GTP Y++PE L++ Y D W LG V+YE+ Y ERL EL
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP + L+ AF + L V+E A+ G+L ++ R E Y +
Sbjct: 60 QNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 113
Query: 178 IAAALQYVHSRRILHR 193
I +AL+Y+HSR +++R
Sbjct: 114 IVSALEYLHSRDVVYR 129
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y++PE L++ Y D W LG V+YEM+ + PF+++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+++ F GTP Y++PE L++ Y D W LG V+YE+ Y ERL EL
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP + L+ AF + L V+E A+ G+L ++ R E Y +
Sbjct: 60 QNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 113
Query: 178 IAAALQYVHSRRILHR 193
I +AL+Y+HSR +++R
Sbjct: 114 IVSALEYLHSRDVVYR 129
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y++PE L++ Y D W LG V+YEM+ + PF+++
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 212
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+++ F GTP Y++PE L++ Y D W LG V+YE+
Sbjct: 164 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 202
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHIS 93
++D+F G P Y +PE + KY P DVWSLG +LY +V+ PF +++
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HPNIV+L + + L+LV E A G++ ++A R K E + FR
Sbjct: 68 KVLNHPNIVKLFEVIETE--KTLYLVXEYASGGEVFDYLVAHGRXK-----EKEARAKFR 120
Query: 177 QIAAALQYVHSRRILHR 193
QI +A+QY H + I+HR
Sbjct: 121 QIVSAVQYCHQKFIVHR 137
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
+ +D+F G P Y +PE + KY P DVWSLG +LY + S F G ER+
Sbjct: 167 NKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 61 ELKYSFP 67
KY P
Sbjct: 227 RGKYRIP 233
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
F GTP Y+SPE L++ Y P D+W+ G +LY + +G P + + ++K
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYIL--LVGYPPFWDEDQHRLYQQIKAGA 222
Query: 64 YSFPSDVWS 72
Y FPS W
Sbjct: 223 YDFPSPEWD 231
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y+SPE L++ Y P D+W+ G +LY ++ PF+ +
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDE 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
F GTP Y++PE L++ Y D W LG V+YEM+ + PF+++
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 214
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+++ F GTP Y++PE L++ Y D W LG V+YE+
Sbjct: 166 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 204
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS 93
+F GTP Y++PE L + Y D W LG VLYEM+ PF+S++ +
Sbjct: 198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA 245
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS 55
S+ +F GTP Y++PE L + Y D W LG VLYE+ G P + S
Sbjct: 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEM--LYGLPPFYS 241
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEM 103
+ GTP +M+PE L +Y F D ++LG LYEM+A + PF ++ + L +R+
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-- 405
Query: 104 ALFPPLPSGVLYSDK 118
L V Y DK
Sbjct: 406 -----LEQAVTYPDK 415
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL- 59
+ + + GTP +M+PE L +Y F D ++LG LYE+ + G P+ E++
Sbjct: 339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG-PFRARGEKVE 397
Query: 60 -KELK 63
KELK
Sbjct: 398 NKELK 402
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEM 103
+ GTP +M+PE L +Y F D ++LG LYEM+A + PF ++ + L +R+
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-- 405
Query: 104 ALFPPLPSGVLYSDK 118
L V Y DK
Sbjct: 406 -----LEQAVTYPDK 415
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL- 59
+ + + GTP +M+PE L +Y F D ++LG LYE+ + G P+ E++
Sbjct: 339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG-PFRARGEKVE 397
Query: 60 -KELK 63
KELK
Sbjct: 398 NKELK 402
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEM 103
+ GTP +M+PE L +Y F D ++LG LYEM+A + PF ++ + L +R+
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-- 405
Query: 104 ALFPPLPSGVLYSDK 118
L V Y DK
Sbjct: 406 -----LEQAVTYPDK 415
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL- 59
+ + + GTP +M+PE L +Y F D ++LG LYE+ + G P+ E++
Sbjct: 339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG-PFRARGEKVE 397
Query: 60 -KELK 63
KELK
Sbjct: 398 NKELK 402
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEM 103
+ GTP +M+PE L +Y F D ++LG LYEM+A + PF ++ + L +R+
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-- 405
Query: 104 ALFPPLPSGVLYSDK 118
L V Y DK
Sbjct: 406 -----LEQAVTYPDK 415
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL- 59
+ + + GTP +M+PE L +Y F D ++LG LYE+ + G P+ E++
Sbjct: 339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG-PFRARGEKVE 397
Query: 60 -KELK 63
KELK
Sbjct: 398 NKELK 402
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++F+GTP++M+PE +K+ Y +D+WSLG E+ + P H
Sbjct: 162 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 208
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 26/36 (72%)
Query: 9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
++F+GTP++M+PE +K+ Y +D+WSLG E+
Sbjct: 162 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 197
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 10 SFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPS 68
+F+GTP +M+PE +++++ Y F +D+WS G E+ + PY+ P +K L + +
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG-AAPYHKYPP-MKVLMLTLQN 237
Query: 69 DVWSL--GCVLYEMVALQSPFFSKHISL 94
D SL G EM+ F K ISL
Sbjct: 238 DPPSLETGVQDKEMLKKYGKSFRKMISL 265
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGD----LALVIAECRQKKCHLAECLVWSYFR 176
HHPNIV ++F + EL+LV++L G + ++A+ K L E + + R
Sbjct: 66 HHPNIVSYYTSFVVKD--ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 177 QIAAALQYVHSRRILHR 193
++ L+Y+H +HR
Sbjct: 124 EVLEGLEYLHKNGQIHR 140
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 10 SFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPS 68
+F+GTP +M+PE +++++ Y F +D+WS G E+ + PY+ P +K L + +
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG-AAPYHKYPP-MKVLMLTLQN 242
Query: 69 DVWSL--GCVLYEMVALQSPFFSKHISL 94
D SL G EM+ F K ISL
Sbjct: 243 DPPSLETGVQDKEMLKKYGKSFRKMISL 270
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGD----LALVIAECRQKKCHLAECLVWSYFR 176
HHPNIV ++F + EL+LV++L G + ++A+ K L E + + R
Sbjct: 71 HHPNIVSYYTSFVVKD--ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 177 QIAAALQYVHSRRILHR 193
++ L+Y+H +HR
Sbjct: 129 EVLEGLEYLHKNGQIHR 145
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++F+GTP++M+PE +K+ Y +D+WSLG E+ + P H
Sbjct: 182 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 228
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 26/36 (72%)
Query: 9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
++F+GTP++M+PE +K+ Y +D+WSLG E+
Sbjct: 182 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 217
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 19 SPERLKELKYSFPSDVWSLGCVLYEVDSFL------GTPYYMSPERLKELKYSFPSDVWS 72
SP L + KY+ V G + +FL GTP +M+PE L++ + SDV+S
Sbjct: 167 SPNLLVDKKYTV--KVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYS 224
Query: 73 LGCVLYEMVALQSPFFSKH----ISLNGL-CKRIEM 103
G +L+E+ LQ P+ + + ++ G CKR+E+
Sbjct: 225 FGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 7 SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
S S GTP +M+PE L++ + SDV+S G +L+E+
Sbjct: 195 SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
+ +GTPY+M+PE + Y D+WSLG + EM+ + P+ +++
Sbjct: 176 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 221
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
S + +GTPY+M+PE + Y D+WSLG + E+ G P Y++ L+ L
Sbjct: 172 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM--IEGEPPYLNENPLRAL 226
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
+PNIV ++ G EL++V+E G L V+ E C + E + + R+ A
Sbjct: 77 NPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTET----C-MDEGQIAAVCRECLQA 129
Query: 182 LQYVHSRRILHRG----------ERETFLSVLGDCVRTVSEQAK 215
L+++HS +++HR + L+ G C + EQ+K
Sbjct: 130 LEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 173
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
+ +GTPY+M+PE + Y D+WSLG + EM+ + P+ +++
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
S + +GTPY+M+PE + Y D+WSLG + E+ G P Y++ L+ L
Sbjct: 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM--IEGEPPYLNENPLRAL 225
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
+PNIV ++ G EL++V+E G L V+ E C + E + + R+ A
Sbjct: 76 NPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTET----C-MDEGQIAAVCRECLQA 128
Query: 182 LQYVHSRRILHRG----------ERETFLSVLGDCVRTVSEQAK 215
L+++HS +++HR + L+ G C + EQ+K
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 44.7 bits (104), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
F GTP Y++PE + Y D W+ G +LYEM+A Q+PF
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
Score = 33.9 bits (76), Expect = 0.069, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 7 SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ F GTP Y++PE + Y D W+ G +LYE+
Sbjct: 498 TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 535
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L HPNI+++ F +++V+E + G+L I + + L+E V +Q
Sbjct: 75 KSLDHPNIIKIFEVFEDY--HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ 132
Query: 178 IAAALQYVHSRRILHR 193
+ AL Y HS+ ++H+
Sbjct: 133 MMNALAYFHSQHVVHK 148
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
GT YM+PE K +F D+WS G V+Y ++ PF
Sbjct: 188 GTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPF 225
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLY 42
GT YM+PE K +F D+WS G V+Y
Sbjct: 188 GTALYMAPEVFKR-DVTFKCDIWSAGVVMY 216
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE L + YS D WS+G + Y + G P + E++ + +Y F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL--LCGYPPFYDENDAKLFEQILKAEYEF 237
Query: 67 PSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI--EMALFPPLPSGVLYSDKTLHHPN 124
S W + ++ + F +H+ KR E AL P +G DK +H
Sbjct: 238 DSPYW-------DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290
Query: 125 IVELRSAFASRSGQELF 141
+++ FA ++ F
Sbjct: 291 SEQIKKNFAKSKWKQAF 307
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 27 KYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
K P V S C GTP Y++PE L + YS D WS+G + Y ++ P
Sbjct: 167 KMEDPGSVLSTAC---------GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 87 FFSKH 91
F+ ++
Sbjct: 218 FYDEN 222
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
+ HPNIV L + SG L+L+++L G+L I E K E Q+
Sbjct: 73 IKHPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVL 126
Query: 180 AALQYVHSRRILHR 193
A++Y+H I+HR
Sbjct: 127 DAVKYLHDLGIVHR 140
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 45 DSFLGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++F+GTPY+M+PE + + Y F SD+WSLG EM P H
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Query: 9 DSFLGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEV 44
++F+GTPY+M+PE + + Y F SD+WSLG E+
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 121 HHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
HH NI AF ++ +L+LV+E G + +I K L E + R
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICR 136
Query: 177 QIAAALQYVHSRRILHR 193
+I L ++H +++HR
Sbjct: 137 EILRGLSHLHQHKVIHR 153
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE L + YS D WS+G + Y + G P + E++ + +Y F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL--LCGYPPFYDENDAKLFEQILKAEYEF 237
Query: 67 PSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI--EMALFPPLPSGVLYSDKTLHHPN 124
S W + ++ + F +H+ KR E AL P +G DK +H
Sbjct: 238 DSPYW-------DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290
Query: 125 IVELRSAFASRSGQELF 141
+++ FA ++ F
Sbjct: 291 SEQIKKNFAKSKWKQAF 307
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 27 KYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
K P V S C GTP Y++PE L + YS D WS+G + Y ++ P
Sbjct: 167 KMEDPGSVLSTAC---------GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 87 FFSKH 91
F+ ++
Sbjct: 218 FYDEN 222
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
+ HPNIV L + SG L+L+++L G+L I E K E Q+
Sbjct: 73 IKHPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVL 126
Query: 180 AALQYVHSRRILHR 193
A++Y+H I+HR
Sbjct: 127 DAVKYLHDLGIVHR 140
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++F+GTP++M+PE +++ Y +D+WSLG E+ + P H
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH 224
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 26/36 (72%)
Query: 9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
++F+GTP++M+PE +++ Y +D+WSLG E+
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ + + F R + ++L+LE A +G+L + QK E ++ ++A
Sbjct: 71 LRHPNILRMYNYFHDR--KRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELA 124
Query: 180 AALQYVHSRRILHR 193
AL Y H R+++HR
Sbjct: 125 DALHYCHERKVIHR 138
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS-KHIS 93
WS+ GT Y+ PE ++ + D+W G + YE + PF S H
Sbjct: 160 WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
Query: 94 LNGLCKRIEMALFPPL 109
+ +++ FPP
Sbjct: 220 THRRIVNVDLK-FPPF 234
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ + + F R + ++L+LE A +G+L + QK E ++ ++A
Sbjct: 72 LRHPNILRMYNYFHDR--KRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELA 125
Query: 180 AALQYVHSRRILHR 193
AL Y H R+++HR
Sbjct: 126 DALHYCHERKVIHR 139
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS-KHIS 93
WS+ GT Y+ PE ++ + D+W G + YE + PF S H
Sbjct: 161 WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 220
Query: 94 LNGLCKRIEMALFPPL 109
+ +++ FPP
Sbjct: 221 THRRIVNVDLK-FPPF 235
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ + + F R + ++L+LE A +G+L + QK E ++ ++A
Sbjct: 71 LRHPNILRMYNYFHDR--KRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELA 124
Query: 180 AALQYVHSRRILHR 193
AL Y H R+++HR
Sbjct: 125 DALHYCHERKVIHR 138
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS-KHIS 93
WS+ GT Y+ PE ++ + D+W G + YE + PF S H
Sbjct: 160 WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
Query: 94 LNGLCKRIEMALFPPL 109
+ +++ FPP
Sbjct: 220 THRRIVNVDLK-FPPF 234
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
GTP Y+SPE + SDVWSLGC+ Y ++ + PF
Sbjct: 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTP 51
GTP Y+SPE + SDVWSLGC+ Y + +G P
Sbjct: 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTL--LIGRP 210
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP+I+EL + F ++LVLE+ G++ + + + +E + QI
Sbjct: 68 LKHPSILELYNYF--EDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQII 122
Query: 180 AALQYVHSRRILHR 193
+ Y+HS ILHR
Sbjct: 123 TGMLYLHSHGILHR 136
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE L + YS D WS+G + Y + G P + E++ + +Y F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL--LCGYPPFYDENDAKLFEQILKAEYEF 237
Query: 67 PSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI--EMALFPPLPSGVLYSDKTLHHPN 124
S W + ++ + F +H+ KR E AL P +G DK +H
Sbjct: 238 DSPYW-------DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290
Query: 125 IVELRSAFASRSGQELF 141
+++ FA ++ F
Sbjct: 291 SEQIKKNFAKSKWKQAF 307
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 27 KYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
K P V S C GTP Y++PE L + YS D WS+G + Y ++ P
Sbjct: 167 KMEDPGSVLSTAC---------GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 87 FFSKH 91
F+ ++
Sbjct: 218 FYDEN 222
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
+ HPNIV L + SG L+L+++L G+L I E K E Q+
Sbjct: 73 IKHPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVL 126
Query: 180 AALQYVHSRRILHR 193
A++Y+H I+HR
Sbjct: 127 DAVKYLHDLGIVHR 140
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
+ F+GTP++M+PE +K+ Y +D+WSLG E+ + P H
Sbjct: 177 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 223
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ F+GTP++M+PE +K+ Y +D+WSLG E+
Sbjct: 177 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
+GTPY+M+PE + Y D+WSLG + EM+ + P+ +++
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 221
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+GTPY+M+PE + Y D+WSLG + E+ G P Y++ L+ L
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM--IEGEPPYLNENPLRAL 226
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
+PNIV ++ G EL++V+E G L V+ E C + E + + R+ A
Sbjct: 77 NPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTET----C-MDEGQIAAVCRECLQA 129
Query: 182 LQYVHSRRILHRG----------ERETFLSVLGDCVRTVSEQAK 215
L+++HS +++HR + L+ G C + EQ+K
Sbjct: 130 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 173
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
+GTPY+M+PE + Y D+WSLG + EM+ + P+ +++
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+GTPY+M+PE + Y D+WSLG + E+ G P Y++ L+ L
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM--IEGEPPYLNENPLRAL 225
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
+PNIV ++ G EL++V+E G L V+ E C + E + + R+ A
Sbjct: 76 NPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTET----C-MDEGQIAAVCRECLQA 128
Query: 182 LQYVHSRRILHRG----------ERETFLSVLGDCVRTVSEQAK 215
L+++HS +++HR + L+ G C + EQ+K
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
+ F+GTP++M+PE +K+ Y +D+WSLG E+ + P H
Sbjct: 162 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 208
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ F+GTP++M+PE +K+ Y +D+WSLG E+
Sbjct: 162 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 197
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L HPN+V+L + L++V EL +QG + E K L+E YF+
Sbjct: 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP----VMEVPTLKP-LSEDQARFYFQD 145
Query: 178 IAAALQYVHSRRILHRGERETFLSVLGD 205
+ ++Y+H ++I+HR + + L V D
Sbjct: 146 LIKGIEYLHYQKIIHRDIKPSNLLVGED 173
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 48 LGTPYYMSPERLKELKYSFPS---DVWSLGCVLYEMVALQSPFFSKHI 92
+GTP +M+PE L E + F DVW++G LY V Q PF + I
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 12 LGTPYYMSPERLKELKYSFPS---DVWSLGCVLY 42
+GTP +M+PE L E + F DVW++G LY
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
+GTPY+M+PE + Y D+WSLG + EM+ + P+ +++
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+GTPY+M+PE + Y D+WSLG + E+ G P Y++ L+ L
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM--IEGEPPYLNENPLRAL 225
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
+PNIV ++ G EL++V+E G L V+ E C + E + + R+ A
Sbjct: 76 NPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTET----C-MDEGQIAAVCRECLQA 128
Query: 182 LQYVHSRRILHRG----------ERETFLSVLGDCVRTVSEQAK 215
L+++HS +++HR + L+ G C + EQ+K
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 36 SLGCVLYEVD---SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHI 92
GC ++ D S + T Y +PE + L + SD+WS GCVL E+ S F H
Sbjct: 205 DFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT-GSLLFRTHE 263
Query: 93 SLNGLCKRIEMALFPPLPSGVLY 115
+ L + ++ P+P +LY
Sbjct: 264 HMEHLA--MMESIIQPIPKNMLY 284
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 2 SVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKE 61
+ K+ S + T Y +PE + L + SD+WS GCVL E+ + G+ + + E ++
Sbjct: 210 TFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL--YTGSLLFRTHEHMEH 267
Query: 62 L 62
L
Sbjct: 268 L 268
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF- 106
LGT YY++PE L++ KY DVWS G +LY ++ PF + + + KR+E F
Sbjct: 167 LGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQ--TDQEILKRVEKGKFS 223
Query: 107 --PP-------------------LPSGVLYSDKTLHHPNIVELRSAFASRSGQ 138
PP PS + +++ L+HP IV+ S + G+
Sbjct: 224 FDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGK 276
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L HPNI++L F + + +LV+E+ G+L I RQK + ++ +Q
Sbjct: 59 KQLDHPNIMKLYEFFEDK--RNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVI---MKQ 112
Query: 178 IAAALQYVHSRRILHR 193
+ + Y+H I+HR
Sbjct: 113 VLSGTTYLHKHNIVHR 128
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 36 SLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN 95
LG +Y+ + + +Y SPE L + Y D+WSLGC+L EM + P FS ++
Sbjct: 191 QLGQRIYQX---IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE-PLFSGANEVD 246
Query: 96 GLCKRIEMALFPP 108
+ K +E+ PP
Sbjct: 247 QMNKIVEVLGIPP 259
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
+Y SPE L + Y D+WSLGC+L E+ + G P + + ++
Sbjct: 204 FYRSPEVLLGMPYDLAIDMWSLGCILVEMHT--GEPLFSGANEVDQMN 249
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 19 SPERLKELKYSFPSDVWSLGCVLYEVDSFL------GTPYYMSPERLKELKYSFPSDVWS 72
SP L + KY+ V G + FL GTP +M+PE L++ + SDV+S
Sbjct: 167 SPNLLVDKKYTV--KVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYS 224
Query: 73 LGCVLYEMVALQSPFFSKH----ISLNGL-CKRIEM 103
G +L+E+ LQ P+ + + ++ G CKR+E+
Sbjct: 225 FGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260
Score = 33.9 bits (76), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
GTP +M+PE L++ + SDV+S G +L+E+
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 38 GCVLYEVDSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
++ + F+GTPY+M+PE + E +Y DVWSLG E+ + P F+
Sbjct: 162 ASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 6 SSVDSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEV 44
+ + F+GTPY+M+PE + E +Y DVWSLG E+
Sbjct: 166 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 38 GCVLYEVDSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
++ + F+GTPY+M+PE + E +Y DVWSLG E+ + P F+
Sbjct: 201 ASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 6 SSVDSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEV 44
+ + F+GTPY+M+PE + E +Y DVWSLG E+
Sbjct: 205 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 36 SLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN 95
LG +Y+ + + +Y SPE L + Y D+WSLGC+L EM P FS ++
Sbjct: 210 QLGQRIYQX---IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEM-HTGEPLFSGANEVD 265
Query: 96 GLCKRIEMALFPP 108
+ K +E+ PP
Sbjct: 266 QMNKIVEVLGIPP 278
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
+Y SPE L + Y D+WSLGC+L E+ + G P + + ++
Sbjct: 223 FYRSPEVLLGMPYDLAIDMWSLGCILVEMHT--GEPLFSGANEVDQMN 268
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 36 SLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN 95
LG +Y+ + + +Y SPE L + Y D+WSLGC+L EM P FS ++
Sbjct: 210 QLGQRIYQX---IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEM-HTGEPLFSGANEVD 265
Query: 96 GLCKRIEMALFPP 108
+ K +E+ PP
Sbjct: 266 QMNKIVEVLGIPP 278
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
+Y SPE L + Y D+WSLGC+L E+ + G P + + ++
Sbjct: 223 FYRSPEVLLGMPYDLAIDMWSLGCILVEMHT--GEPLFSGANEVDQMN 268
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HP I+++++ F ++ ++VLEL + G+L V+ R K+ A C + YF
Sbjct: 209 KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 260
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A+QY+H I+HR
Sbjct: 261 QMLLAVQYLHENGIIHR 277
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 4 KTSSVDSFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEVDSFLGTPYYMS----- 55
+TS + + GTP Y++PE L + Y+ D WSLG +L+ S G P +
Sbjct: 308 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS--GYPPFSEHRTQV 365
Query: 56 --PERLKELKYSFPSDVWS 72
+++ KY+F +VW+
Sbjct: 366 SLKDQITSGKYNFIPEVWA 384
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 46 SFLGTPYYMSPERLKELK---YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIE 102
+ GTP Y++PE L + Y+ D WSLG +L+ ++ P FS+H + L +I
Sbjct: 314 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRTQVSLKDQIT 372
Query: 103 MALFPPLP 110
+ +P
Sbjct: 373 SGKYNFIP 380
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HP I+++++ F ++ ++VLEL + G+L V+ R K+ A C + YF
Sbjct: 195 KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 246
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A+QY+H I+HR
Sbjct: 247 QMLLAVQYLHENGIIHR 263
Score = 33.5 bits (75), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 4 KTSSVDSFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEVDSFLGTPYYMS----- 55
+TS + + GTP Y++PE L + Y+ D WSLG +L+ S G P +
Sbjct: 294 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS--GYPPFSEHRTQV 351
Query: 56 --PERLKELKYSFPSDVWS 72
+++ KY+F +VW+
Sbjct: 352 SLKDQITSGKYNFIPEVWA 370
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 46 SFLGTPYYMSPERLKELK---YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIE 102
+ GTP Y++PE L + Y+ D WSLG +L+ ++ P FS+H + L +I
Sbjct: 300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRTQVSLKDQIT 358
Query: 103 MALFPPLP 110
+ +P
Sbjct: 359 SGKYNFIP 366
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
F GTP Y++PE + Y D W+ G +LYEM+A Q+PF
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 7 SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ F GTP Y++PE + Y D W+ G +LYE+
Sbjct: 177 TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 214
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
TPYY++PE L KY D WSLG + Y ++ PF+S H
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNH 267
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 12/69 (17%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-------MSP---ERLKELK 63
TPYY++PE L KY D WSLG + Y + G P + +SP R++ +
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDXWSLGVIXYIL--LCGYPPFYSNHGLAISPGXKTRIRXGQ 283
Query: 64 YSFPSDVWS 72
Y FP+ WS
Sbjct: 284 YEFPNPEWS 292
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
LHHP ++ L AF + E+ L+LE G+L IA K ++E V +Y RQ
Sbjct: 105 LHHPKLINLHDAFEDK--YEMVLILEFLSGGELFDRIAAEDYK---MSEAEVINYMRQAC 159
Query: 180 AALQYVHSRRILH 192
L+++H I+H
Sbjct: 160 EGLKHMHEHSIVH 172
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 25/103 (24%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF- 106
LGT YY++PE L++ KY DVWS G +LY ++ PF + + + KR+E F
Sbjct: 184 LGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQ--TDQEILKRVEKGKFS 240
Query: 107 --PP-------------------LPSGVLYSDKTLHHPNIVEL 128
PP PS + +++ L+HP IV+
Sbjct: 241 FDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKF 283
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L HPNI++L F + + +LV+E+ G+L I RQK + ++ +Q
Sbjct: 76 KQLDHPNIMKLYEFFEDK--RNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVI---MKQ 129
Query: 178 IAAALQYVHSRRILHR 193
+ + Y+H I+HR
Sbjct: 130 VLSGTTYLHKHNIVHR 145
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
DS +GT YM PE +K++ S + DVWSLGC+LY M ++PF
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 14/65 (21%)
Query: 1 MSVKTSSV--DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEVDSF 47
M T+SV DS +GT YM PE +K++ S + DVWSLGC+LY + ++
Sbjct: 204 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM-TY 262
Query: 48 LGTPY 52
TP+
Sbjct: 263 GKTPF 267
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
HPNI+ L + +R+ ++ L+LEL G+L +A+ K L+E S+ +QI
Sbjct: 74 HPNIITLHDVYENRT--DVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDG 127
Query: 182 LQYVHSRRILH 192
+ Y+H+++I H
Sbjct: 128 VNYLHTKKIAH 138
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 66 FPSDVWS 72
F + +S
Sbjct: 237 FDEEFFS 243
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
DS +GT YM PE +K++ S + DVWSLGC+LY M ++PF
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 14/65 (21%)
Query: 1 MSVKTSSV--DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEVDSF 47
M T+SV DS +GT YM PE +K++ S + DVWSLGC+LY + ++
Sbjct: 204 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM-TY 262
Query: 48 LGTPY 52
TP+
Sbjct: 263 GKTPF 267
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
DS +GT YM PE +K++ S + DVWSLGC+LY M ++PF
Sbjct: 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 14/65 (21%)
Query: 1 MSVKTSSV--DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEVDSF 47
M T+SV DS +GT YM PE +K++ S + DVWSLGC+LY + ++
Sbjct: 157 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM-TY 215
Query: 48 LGTPY 52
TP+
Sbjct: 216 GKTPF 220
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 116 SDKTLHHPNIVELRSAFASRSGQE-LFLVLELADQGDLALVIAECRQKKCHLAECLVWSY 174
SD +L + S +SRS + LF+ +E D+G L I + R +K L + L
Sbjct: 84 SDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKVLALEL 141
Query: 175 FRQIAAALQYVHSRRILHR 193
F QI + Y+HS++++HR
Sbjct: 142 FEQITKGVDYIHSKKLIHR 160
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
GT YMSPE++ Y D+++LG +L E++ + F L I +F
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDK 256
Query: 109 LPSGVLY---SDKTLHHPNIVEL 128
+L S K PN E+
Sbjct: 257 KEKTLLQKLLSKKPEDRPNTSEI 279
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
GT YMSPE++ Y D+++LG +L E+
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HP I+++++ F ++ ++VLEL + G+L V+ R K+ A C + YF
Sbjct: 70 KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 121
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A+QY+H I+HR
Sbjct: 122 QMLLAVQYLHENGIIHR 138
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 4 KTSSVDSFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEVDSFLGTPYYMS----- 55
+TS + + GTP Y++PE L + Y+ D WSLG +L+ S G P +
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS--GYPPFSEHRTQV 226
Query: 56 --PERLKELKYSFPSDVWS 72
+++ KY+F +VW+
Sbjct: 227 SLKDQITSGKYNFIPEVWA 245
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 46 SFLGTPYYMSPERLKELK---YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIE 102
+ GTP Y++PE L + Y+ D WSLG +L+ ++ P FS+H + L +I
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRTQVSLKDQIT 233
Query: 103 MALFPPLP 110
+ +P
Sbjct: 234 SGKYNFIP 241
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A +G++ + QK E +Y ++A
Sbjct: 70 LRHPNILRLYGYF--HDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITELA 123
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 124 NALSYCHSKRVIHR 137
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 159 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 225 RVEFTFPDFV 234
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A +G++ + QK E +Y ++A
Sbjct: 70 LRHPNILRLYGYF--HDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITELA 123
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 124 NALSYCHSKRVIHR 137
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 159 WSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLKELKYSFPS 68
GT Y+ PE ++ + D+WSLG + YE F Y + +R+ ++++FP
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 69 DV 70
V
Sbjct: 233 FV 234
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HP I+++++ F ++ ++VLEL + G+L V+ R K+ A C + YF
Sbjct: 76 KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 127
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A+QY+H I+HR
Sbjct: 128 QMLLAVQYLHENGIIHR 144
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 4 KTSSVDSFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEVDSFLGTPYYMS----- 55
+TS + + GTP Y++PE L + Y+ D WSLG +L+ S G P +
Sbjct: 175 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS--GYPPFSEHRTQV 232
Query: 56 --PERLKELKYSFPSDVWS 72
+++ KY+F +VW+
Sbjct: 233 SLKDQITSGKYNFIPEVWA 251
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 46 SFLGTPYYMSPERLKELK---YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIE 102
+ GTP Y++PE L + Y+ D WSLG +L+ ++ P FS+H + L +I
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRTQVSLKDQIT 239
Query: 103 MALFPPLP 110
+ +P
Sbjct: 240 SGKYNFIP 247
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HP I+++++ F ++ ++VLEL + G+L V+ R K+ A C + YF
Sbjct: 70 KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 121
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A+QY+H I+HR
Sbjct: 122 QMLLAVQYLHENGIIHR 138
Score = 33.9 bits (76), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 4 KTSSVDSFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEVDSFLGTPYYMS----- 55
+TS + + GTP Y++PE L + Y+ D WSLG +L+ S G P +
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS--GYPPFSEHRTQV 226
Query: 56 --PERLKELKYSFPSDVWS 72
+++ KY+F +VW+
Sbjct: 227 SLKDQITSGKYNFIPEVWA 245
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 46 SFLGTPYYMSPERLKELK---YSFPSDVWSLGCVLYEMVALQS-PFFSKHISLNGLCKRI 101
+ GTP Y++PE L + Y+ D WSLG +L+ + L P FS+H + L +I
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF--ICLSGYPPFSEHRTQVSLKDQI 232
Query: 102 EMALFPPLP 110
+ +P
Sbjct: 233 TSGKYNFIP 241
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HP I+++++ F ++ ++VLEL + G+L V+ R K+ A C + YF
Sbjct: 70 KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 121
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A+QY+H I+HR
Sbjct: 122 QMLLAVQYLHENGIIHR 138
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 4 KTSSVDSFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEVDSFLGTPYYMS----- 55
+TS + + GTP Y++PE L + Y+ D WSLG +L+ S G P +
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS--GYPPFSEHRTQV 226
Query: 56 --PERLKELKYSFPSDVWS 72
+++ KY+F +VW+
Sbjct: 227 SLKDQITSGKYNFIPEVWA 245
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 46 SFLGTPYYMSPERLKELK---YSFPSDVWSLGCVLYEMVALQS-PFFSKHISLNGLCKRI 101
+ GTP Y++PE L + Y+ D WSLG +L+ + L P FS+H + L +I
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF--ICLSGYPPFSEHRTQVSLKDQI 232
Query: 102 EMALFPPLP 110
+ +P
Sbjct: 233 TSGKYNFIP 241
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
DS +GT YM PE +K++ S + DVWSLGC+LY M ++PF
Sbjct: 166 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 14/75 (18%)
Query: 1 MSVKTSSV--DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEVDSF 47
M T+SV DS +GT YM PE +K++ S + DVWSLGC+LY + ++
Sbjct: 156 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM-TY 214
Query: 48 LGTPYYMSPERLKEL 62
TP+ ++ +L
Sbjct: 215 GKTPFQQIINQISKL 229
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L+HP I+++++ F ++ ++VLEL + G+L V+ R K+ A C + YF
Sbjct: 69 KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 120
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A+QY+H I+HR
Sbjct: 121 QMLLAVQYLHENGIIHR 137
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 4 KTSSVDSFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEVDSFLGTPYYMS----- 55
+TS + + GTP Y++PE L + Y+ D WSLG +L+ S G P +
Sbjct: 168 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS--GYPPFSEHRTQV 225
Query: 56 --PERLKELKYSFPSDVWS 72
+++ KY+F +VW+
Sbjct: 226 SLKDQITSGKYNFIPEVWA 244
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 46 SFLGTPYYMSPERLKELK---YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIE 102
+ GTP Y++PE L + Y+ D WSLG +L+ ++ P FS+H + L +I
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRTQVSLKDQIT 232
Query: 103 MALFPPLP 110
+ +P
Sbjct: 233 SGKYNFIP 240
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
DS +GT YM PE +K++ S + DVWSLGC+LY M ++PF
Sbjct: 170 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 14/75 (18%)
Query: 1 MSVKTSSV--DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEVDSF 47
M T+SV DS +GT YM PE +K++ S + DVWSLGC+LY + ++
Sbjct: 160 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM-TY 218
Query: 48 LGTPYYMSPERLKEL 62
TP+ ++ +L
Sbjct: 219 GKTPFQQIINQISKL 233
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
DS +GT YM PE +K++ S + DVWSLGC+LY M ++PF
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 14/65 (21%)
Query: 1 MSVKTSSV--DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEVDSF 47
M T+SV DS +GT YM PE +K++ S + DVWSLGC+LY + ++
Sbjct: 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM-TY 234
Query: 48 LGTPY 52
TP+
Sbjct: 235 GKTPF 239
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
DS +GT YM PE +K++ S + DVWSLGC+LY M ++PF
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 12/65 (18%)
Query: 9 DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEVDSFLGTPYYMSPE 57
DS +GT YM PE +K++ S + DVWSLGC+LY + ++ TP+
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM-TYGKTPFQQIIN 244
Query: 58 RLKEL 62
++ +L
Sbjct: 245 QISKL 249
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 45 DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
D+ +GTP Y+SPE LK + Y D WS+G LYEM+ +PF++ SL G +
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSK 289
Query: 101 I 101
I
Sbjct: 290 I 290
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Query: 9 DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEVDSFLG-TPYY 53
D+ +GTP Y+SPE LK + Y D WS+G LYE+ +G TP+Y
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM--LVGDTPFY 279
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 45 DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
D+ +GTP Y+SPE LK + Y D WS+G LYEM+ +PF++ SL G +
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSK 289
Query: 101 I 101
I
Sbjct: 290 I 290
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Query: 9 DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEVDSFLG-TPYY 53
D+ +GTP Y+SPE LK + Y D WS+G LYE+ +G TP+Y
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM--LVGDTPFY 279
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 44 VDSFLGTPYYMSPERLKE--LKYSFPSDVWSLGCVLYEMVALQSPFF 88
++F GT YM+PE + + Y +D+WSLGC + EM + PF+
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 226
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 8 VDSFLGTPYYMSPERLKE--LKYSFPSDVWSLGCVLYEV 44
++F GT YM+PE + + Y +D+WSLGC + E+
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEM 218
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLA--ECLVWSYF 175
K L H NIV+ +F+ ++F+ E G L+ ++ R K L E + Y
Sbjct: 74 KHLKHKNIVQYLGSFSENGFIKIFM--EQVPGGSLSALL---RSKWGPLKDNEQTIGFYT 128
Query: 176 RQIAAALQYVHSRRILHR 193
+QI L+Y+H +I+HR
Sbjct: 129 KQILEGLKYLHDNQIVHR 146
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 278
Query: 67 PS 68
PS
Sbjct: 279 PS 280
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 45 DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
D+ +GTP Y+SPE LK + Y D WS+G LYEM+ +PF++ SL G +
Sbjct: 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSK 284
Query: 101 I 101
I
Sbjct: 285 I 285
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Query: 9 DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEVDSFLG-TPYY 53
D+ +GTP Y+SPE LK + Y D WS+G LYE+ +G TP+Y
Sbjct: 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM--LVGDTPFY 274
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 278
Query: 67 PS 68
PS
Sbjct: 279 PS 280
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 258
Query: 67 PS 68
PS
Sbjct: 259 PS 260
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE 57
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADE 242
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 258
Query: 67 PS 68
PS
Sbjct: 259 PS 260
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 44 VDSFLGTPYYMSPERLKE--LKYSFPSDVWSLGCVLYEMVALQSPFF 88
++F GT YM+PE + + Y +D+WSLGC + EM + PF+
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 212
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 8 VDSFLGTPYYMSPERLKE--LKYSFPSDVWSLGCVLYEV 44
++F GT YM+PE + + Y +D+WSLGC + E+
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEM 204
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L H NIV+ +F+ ++F+ E G L+ ++ + E + Y +Q
Sbjct: 60 KHLKHKNIVQYLGSFSENGFIKIFM--EQVPGGSLSALL-RSKWGPLKDNEQTIGFYTKQ 116
Query: 178 IAAALQYVHSRRILHR 193
I L+Y+H +I+HR
Sbjct: 117 ILEGLKYLHDNQIVHR 132
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 258
Query: 67 PS 68
PS
Sbjct: 259 PS 260
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 258
Query: 67 PS 68
PS
Sbjct: 259 PS 260
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 258
Query: 67 PS 68
PS
Sbjct: 259 PS 260
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 258
Query: 67 PS 68
PS
Sbjct: 259 PS 260
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 278
Query: 67 PS 68
PS
Sbjct: 279 PS 280
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 258
Query: 67 PS 68
PS
Sbjct: 259 PS 260
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 258
Query: 67 PS 68
PS
Sbjct: 259 PS 260
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 258
Query: 67 PS 68
PS
Sbjct: 259 PS 260
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 258
Query: 67 PS 68
PS
Sbjct: 259 PS 260
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 258
Query: 67 PS 68
PS
Sbjct: 259 PS 260
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 195 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 235
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 195 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 252
Query: 67 PS 68
PS
Sbjct: 253 PS 254
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 258
Query: 67 PS 68
PS
Sbjct: 259 PS 260
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 187 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 227
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 187 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 244
Query: 67 PS 68
PS
Sbjct: 245 PS 246
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 233
Score = 33.9 bits (76), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 250
Query: 67 PS 68
PS
Sbjct: 251 PS 252
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 186 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 226
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 186 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 243
Query: 67 PS 68
PS
Sbjct: 244 PS 245
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 48 LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEMVALQSPFFSKHI 92
+GTP Y+SPE L+ + KY D WSLG +YEM+ ++PF+++ +
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 302
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 17/73 (23%)
Query: 12 LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL---- 62
+GTP Y+SPE L+ + KY D WSLG +YE+ + TP+Y E L E
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM-LYGETPFY--AESLVETYGKI 309
Query: 63 -----KYSFPSDV 70
++ FPS V
Sbjct: 310 MNHEERFQFPSHV 322
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 233
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 250
Query: 67 PS 68
PS
Sbjct: 251 PS 252
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 48 LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEMVALQSPFFSKHI 92
+GTP Y+SPE L+ + KY D WSLG +YEM+ ++PF+++ +
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 286
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 17/73 (23%)
Query: 12 LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL---- 62
+GTP Y+SPE L+ + KY D WSLG +YE+ + TP+Y E L E
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM-LYGETPFY--AESLVETYGKI 293
Query: 63 -----KYSFPSDV 70
++ FPS V
Sbjct: 294 MNHEERFQFPSHV 306
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI++L+ F + + E+ LVLEL G+L I E K + +E +QI
Sbjct: 105 LSHPNIIKLKEIFETPT--EISLVLELVTGGELFDRIVE----KGYYSERDAADAVKQIL 158
Query: 180 AALQYVHSRRILHR 193
A+ Y+H I+HR
Sbjct: 159 EAVAYLHENGIVHR 172
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
GTP Y +PE L+ Y D+WS+G + Y ++ PF+ +
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLY 42
GTP Y +PE L+ Y D+WS+G + Y
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITY 241
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+ +PE L+E K+S SDVWS G +L+E+ SF PY P
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSG 112
+ +PE L+E K+S SDVWS G +L+E+ + + + I L + R+E P G
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR-IPLKDVVPRVEKGYKMDAPDG 223
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+ +PE L+E K+S SDVWS G +L+E+ SF PY P
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 219
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSG 112
+ +PE L+E K+S SDVWS G +L+E+ + + + I L + R+E P G
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR-IPLKDVVPRVEKGYKMDAPDG 238
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEMALF 106
TPYY++PE L KY D+WSLG ++Y ++ PF+S G+ +RI + +
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY 231
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEV-----DSFLGTPYYMSP---ERLKELKYS 65
TPYY++PE L KY D+WSLG ++Y + + T +SP R++ +Y
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG 232
Query: 66 FPSDVWS 72
FP+ WS
Sbjct: 233 FPNPEWS 239
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEMALF 106
TPYY++PE L KY D+WSLG ++Y ++ PF+S G+ +RI + +
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY 250
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEV-----DSFLGTPYYMSP---ERLKELKYS 65
TPYY++PE L KY D+WSLG ++Y + + T +SP R++ +Y
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG 251
Query: 66 FPSDVWS 72
FP+ WS
Sbjct: 252 FPNPEWS 258
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+ +PE L+E K+S SDVWS G +L+E+ SF PY P
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSG 112
+ +PE L+E K+S SDVWS G +L+E+ + + + I L + R+E P G
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR-IPLKDVVPRVEKGYKMDAPDG 410
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM 103
+D + T +Y +PE L + Y+ P D+WS+GC+ EM + P F + + L K ++
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDL 226
Query: 104 ALFPP 108
PP
Sbjct: 227 IGLPP 231
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 7 SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSF 66
++D + T +Y +PE L + Y+ P D+WS+GC+ E+ F P + +L F
Sbjct: 167 ALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM--FRRKPLFCGNSEADQLGKIF 224
Query: 67 ------PSDVW 71
P D W
Sbjct: 225 DLIGLPPEDDW 235
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
LGT YY++PE L++ KY DVWS+G +L+ ++A PF
Sbjct: 199 LGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPF 237
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSFP 67
LGT YY++PE L++ KY DVWS+G +L+ + + F G ++++ KY+F
Sbjct: 199 LGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 68 SDVW 71
S W
Sbjct: 258 SPEW 261
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L HPNI++L F + + +LV+E G+L I + E +Q
Sbjct: 91 KLLDHPNIMKLYDFFEDK--RNYYLVMECYKGGELFDEIIH----RMKFNEVDAAVIIKQ 144
Query: 178 IAAALQYVHSRRILHR 193
+ + + Y+H I+HR
Sbjct: 145 VLSGVTYLHKHNIVHR 160
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
F GTP Y++PE + Y D W+ G +LYEM+A Q PF
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
F GTP Y++PE + Y D W+ G +LYE+
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEM 213
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL-FP 107
GTP Y++PE + Y+ D WS G ++YEM+A +PF+ + ++ K + L FP
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-TMKTYEKILNAELRFP 223
Query: 108 PL 109
P
Sbjct: 224 PF 225
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
HP I+ + F + Q++F++++ + G+L ++ + ++ +A+ Y ++ A
Sbjct: 65 HPFIIRMWGTF--QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF----YAAEVCLA 118
Query: 182 LQYVHSRRILHR 193
L+Y+HS+ I++R
Sbjct: 119 LEYLHSKDIIYR 130
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS 55
GTP Y++PE + Y+ D WS G ++YE+ + TP+Y S
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY-TPFYDS 206
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 242
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
+GT YY++PE L+ Y DVWS G +LY +++ PF+ K+ + KR+E +
Sbjct: 184 IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYA 240
Query: 108 -PLPSGVLYSD 117
LP SD
Sbjct: 241 FDLPQWRTISD 251
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSFP 67
+GT YY++PE L+ Y DVWS G +LY + S F G Y +R++ KY+F
Sbjct: 184 IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 68 SDVW 71
W
Sbjct: 243 LPQW 246
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L HPNI++L S ++V EL G+L I + ++ H A ++ +Q
Sbjct: 76 KKLDHPNIMKLFEILEDSSS--FYIVGELYTGGELFDEIIKRKRFSEHDAARII----KQ 129
Query: 178 IAAALQYVHSRRILHR 193
+ + + Y+H I+HR
Sbjct: 130 VFSGITYMHKHNIVHR 145
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 45 DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
D+ +GTP Y+SPE LK + Y D WS+G L+EM+ +PF++ SL G +
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD--SLVGTYSK 290
Query: 101 I 101
I
Sbjct: 291 I 291
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Query: 9 DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEVDSFLG-TPYY 53
D+ +GTP Y+SPE LK + Y D WS+G L+E+ +G TP+Y
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM--LVGDTPFY 280
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 242
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL 182
PNI+ L + LV E + D +Q + L + + Y +I AL
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF-------KQLRQTLTDYDIRFYMYEILKAL 144
Query: 183 QYVHSRRILHR 193
Y HS I+HR
Sbjct: 145 DYCHSMGIMHR 155
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L +L+ Y + D+WSLGC+ M+ + PFF H + + L K
Sbjct: 202 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 259
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVL 41
+ + Y+ PE L +L+ Y + D+WSLGC+
Sbjct: 207 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 237
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL 182
PNIV+L + + L+ E + D ++ L + + Y ++ AL
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT-------LTDYDIRYYIYELLKAL 159
Query: 183 QYVHSRRILHR 193
Y HS+ I+HR
Sbjct: 160 DYCHSQGIMHR 170
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L +L+ Y + D+WSLGC+ M+ + PFF H + + L K
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 239
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVL 41
+ + Y+ PE L +L+ Y + D+WSLGC+
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 217
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL 182
PNIV+L + + L+ E + D ++ L + + Y ++ AL
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT-------LTDYDIRYYIYELLKAL 139
Query: 183 QYVHSRRILHR 193
Y HS+ I+HR
Sbjct: 140 DYCHSQGIMHR 150
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L +L+ Y + D+WSLGC+ M+ + PFF H + + L K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVL 41
+ + Y+ PE L +L+ Y + D+WSLGC+
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 216
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL 182
PNIV+L + + L+ E + D ++ L + + Y ++ AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT-------LTDYDIRYYIYELLKAL 138
Query: 183 QYVHSRRILHR 193
Y HS+ I+HR
Sbjct: 139 DYCHSQGIMHR 149
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 242
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
GTP +++PE + SFP+D+WS+G + Y +++ SPF +
Sbjct: 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN 292
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L H N+++L AF S++ ++ LV+E D G+L I + + +L E + +QI
Sbjct: 143 LDHANLIQLYDAFESKN--DIVLVMEYVDGGELFDRIID---ESYNLTELDTILFMKQIC 197
Query: 180 AALQYVHSRRILH 192
++++H ILH
Sbjct: 198 EGIRHMHQMYILH 210
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLY 42
GTP +++PE + SFP+D+WS+G + Y
Sbjct: 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAY 279
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 242
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 243
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 241
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
+GT YY++PE L+ Y DVWS G +LY +++ PF+ K + + KR+E +
Sbjct: 184 IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYA 240
Query: 108 -PLPSGVLYSD 117
LP SD
Sbjct: 241 FDLPQWRTISD 251
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
+ + + +GT YY++PE L+ Y DVWS G +LY + S F G Y +R+
Sbjct: 176 QNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
Query: 60 KELKYSFPSDVW 71
+ KY+F W
Sbjct: 235 ETGKYAFDLPQW 246
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L HPNI++L S ++V EL G+L I + ++ H A ++ +Q
Sbjct: 76 KKLDHPNIMKLFEILEDSSS--FYIVGELYTGGELFDEIIKRKRFSEHDAARII----KQ 129
Query: 178 IAAALQYVHSRRILHR 193
+ + + Y+H I+HR
Sbjct: 130 VFSGITYMHKHNIVHR 145
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 242
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L +L+ Y + D+WSLGC+ M+ + PFF H + + L K
Sbjct: 183 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 240
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVL 41
+ + Y+ PE L +L+ Y + D+WSLGC+
Sbjct: 188 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 218
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL 182
PNIV+L + + L+ E + D ++ L + + Y ++ AL
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT-------LTDYDIRYYIYELLKAL 140
Query: 183 QYVHSRRILHR 193
Y HS+ I+HR
Sbjct: 141 DYCHSQGIMHR 151
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 243
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 241
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 242
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 242
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L +L+ Y + D+WSLGC+ M+ + PFF H + + L K
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 239
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVL 41
+ + Y+ PE L +L+ Y + D+WSLGC+
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 217
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL 182
PNIV+L + + L+ E + D ++ L + + Y ++ AL
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT-------LTDYDIRYYIYELLKAL 139
Query: 183 QYVHSRRILHR 193
Y HS+ I+HR
Sbjct: 140 DYCHSQGIMHR 150
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
+GT YY++PE L+ Y DVWS G +LY +++ PF+ K + + KR+E +
Sbjct: 184 IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYA 240
Query: 108 -PLPSGVLYSD 117
LP SD
Sbjct: 241 FDLPQWRTISD 251
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
+ + + +GT YY++PE L+ Y DVWS G +LY + S F G Y +R+
Sbjct: 176 QNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
Query: 60 KELKYSFPSDVW 71
+ KY+F W
Sbjct: 235 ETGKYAFDLPQW 246
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L HPNI++L S ++V EL G+L I + ++ H A ++ +Q
Sbjct: 76 KKLDHPNIMKLFEILEDSSS--FYIVGELYTGGELFDEIIKRKRFSEHDAARII----KQ 129
Query: 178 IAAALQYVHSRRILHR 193
+ + + Y+H I+HR
Sbjct: 130 VFSGITYMHKHNIVHR 145
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 242
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L +L+ Y + D+WSLGC+ M+ + PFF H + + L K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVL 41
+ + Y+ PE L +L+ Y + D+WSLGC+
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 216
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL 182
PNIV+L + + L+ E + D ++ L + + Y ++ AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT-------LTDYDIRYYIYELLKAL 138
Query: 183 QYVHSRRILHR 193
Y HS+ I+HR
Sbjct: 139 DYCHSQGIMHR 149
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L +L+ Y + D+WSLGC+ M+ + PFF H + + L K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVL 41
+ + Y+ PE L +L+ Y + D+WSLGC+
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 216
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL 182
PNIV+L + + L+ E + D ++ L + + Y ++ AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT-------LTDYDIRYYIYELLKAL 138
Query: 183 QYVHSRRILHR 193
Y HS+ I+HR
Sbjct: 139 DYCHSQGIMHR 149
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 242
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 242
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 190 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 240
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 242
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 192 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 249
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 197 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 247
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L +L+ Y + D+WSLGC+ M+ + PFF H + + L K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVL 41
+ + Y+ PE L +L+ Y + D+WSLGC+
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 216
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL 182
PNIV+L + + L+ E + D ++ L + + Y ++ AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT-------LTDYDIRYYIYELLKAL 138
Query: 183 QYVHSRRILHR 193
Y HS+ I+HR
Sbjct: 139 DYCHSQGIMHR 149
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L +L+ Y + D+WSLGC+ M+ + PFF H + + L K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVL 41
+ + Y+ PE L +L+ Y + D+WSLGC+
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 216
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL 182
PNIV+L + + L+ E + D ++ L + + Y ++ AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT-------LTDYDIRYYIYELLKAL 138
Query: 183 QYVHSRRILHR 193
Y HS+ I+HR
Sbjct: 139 DYCHSQGIMHR 149
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L +L+ Y + D+WSLGC+ M+ + PFF H + + L K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVL 41
+ + Y+ PE L +L+ Y + D+WSLGC+
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 216
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL 182
PNIV+L + + L+ E + D ++ L + + Y ++ AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT-------LTDYDIRYYIYELLKAL 138
Query: 183 QYVHSRRILHR 193
Y HS+ I+HR
Sbjct: 139 DYCHSQGIMHR 149
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 41 LYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
L + + LGT Y SPE+ K +D++S+G VLYEM+ + PF
Sbjct: 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF 212
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTP 51
+ + LGT Y SPE+ K +D++S+G VLYE+ +G P
Sbjct: 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEM--LVGEP 210
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQL 242
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 69 KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 236 FEDEYFSNTSAL 247
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 42 YEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
Y++ LGT YY++PE LK+ KY+ DVWS G ++Y ++ PF
Sbjct: 203 YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPF 247
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L HPNI++L F + + +LV E + G+L I R K EC + +Q
Sbjct: 101 KSLDHPNIIKLFDVFEDK--KYFYLVTEFYEGGELFEQIIN-RHK---FDECDAANIMKQ 154
Query: 178 IAAALQYVHSRRILHR 193
I + + Y+H I+HR
Sbjct: 155 ILSGICYLHKHNIVHR 170
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLY 42
LGT YY++PE LK+ KY+ DVWS G ++Y
Sbjct: 209 LGTAYYIAPEVLKK-KYNEKCDVWSCGVIMY 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++PE + Y+ D W+LG ++Y+M A PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFA 240
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE + Y+ D W+LG ++Y++ + G P + + E++ K F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 48 LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEMVALQSPFFSKHI 92
+GTP Y+SPE L+ + +Y D WSLG +YEM+ ++PF+++ +
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 286
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 12 LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+GTP Y+SPE L+ + +Y D WSLG +YE+ + TP+Y
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEM-LYGETPFY 282
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 11/54 (20%)
Query: 45 DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
DS +G YM PE +K++ S + DVWSLGC+LY M ++PF
Sbjct: 214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 14/65 (21%)
Query: 1 MSVKTSSV--DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEVDSF 47
M T+SV DS +G YM PE +K++ S + DVWSLGC+LY + ++
Sbjct: 204 MQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM-TY 262
Query: 48 LGTPY 52
TP+
Sbjct: 263 GKTPF 267
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 69 KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 236 FEDEYFSNTSAL 247
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 69 KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 236 FEDEYFSNTSAL 247
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 69 KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 236 FEDEYFSNTSAL 247
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 69 KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 236 FEDEYFSNTSAL 247
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 69 KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 236 FEDEYFSNTSAL 247
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 69 KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 236 FEDEYFSNTSAL 247
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 69 KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 236 FEDEYFSNTSAL 247
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 68 KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 121
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 122 ILNGVYYLHSLQIAH 136
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 235 FEDEYFSNTSAL 246
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 68 KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 121
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 122 ILNGVYYLHSLQIAH 136
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 235 FEDEYFSNTSAL 246
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 69 KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 236 FEDEYFSNTSAL 247
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISL 94
T +Y +PE L + Y D+WSLG +LY M++ Q PF S SL
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL 216
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
HPNIV+L F + FLV+EL + G+L I +KK H +E R++ +A
Sbjct: 65 HPNIVKLHEVFHDQ--LHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSA 118
Query: 182 LQYVHSRRILHR 193
+ ++H ++HR
Sbjct: 119 VSHMHDVGVVHR 130
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 15/71 (21%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER-------------LK 60
T +Y +PE L + Y D+WSLG +LY + S G + S +R +K
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLS--GQVPFQSHDRSLTCTSAVEIMKKIK 229
Query: 61 ELKYSFPSDVW 71
+ +SF + W
Sbjct: 230 KGDFSFEGEAW 240
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 91 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 144
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 145 NALSYCHSKRVIHR 158
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 180 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 186 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 245
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 246 RVEFTFPDFV 255
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
+ + T +Y +PE + EL +S P DVWS+GC+++E
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFE 245
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 79
+ + T +Y +PE + EL +S P DVWS+GC+++E
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFE 245
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 91 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 144
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 145 NALSYCHSKRVIHR 158
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ D GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 180 WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
Score = 33.9 bits (76), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S D GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 186 SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 245
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 246 RVEFTFPDFV 255
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 69 KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 236 FEDEYFSNTSAL 247
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 66 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 119
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 120 NALSYCHSKRVIHR 133
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 161 SSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 221 RVEFTFPDFV 230
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 155 WSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + QK E +Y ++A
Sbjct: 68 LRHPNILRLYGYF--HDATRVYLILEYAPLG----TVYRELQKLSKFDEQRTATYITELA 121
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 122 NALSYCHSKRVIHR 135
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ D GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 157 WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S D GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 163 SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 223 RVEFTFPDFV 232
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 69 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 122
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 123 NALSYCHSKRVIHR 136
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 158 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 210
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 164 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 223
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 224 RVEFTFPDFV 233
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + QK E +Y ++A
Sbjct: 69 LRHPNILRLYGYF--HDATRVYLILEYAPLG----TVYRELQKLSRFDEQRTATYITELA 122
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 123 NALSYCHSKRVIHR 136
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + PF
Sbjct: 158 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE----VDSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE + F Y + R+
Sbjct: 164 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 224 RVEFTFPDFV 233
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+LEL G+L +AE K L E + +Q
Sbjct: 69 KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 173 EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 176 NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 236 FEDEYFSNTSAL 247
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 68 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 121
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 122 NALSYCHSKRVIHR 135
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 157 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 223 RVEFTFPDFV 232
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 17/149 (11%)
Query: 1 MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP---- 56
M K + + GTP Y++PE L + YS D WS+G + Y + G P +
Sbjct: 172 MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL--LCGYPPFYDENDSK 229
Query: 57 --ERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI--EMALFPPLPSG 112
E++ + +Y F S W + ++ + F +++ KR E A P +G
Sbjct: 230 LFEQILKAEYEFDSPYW-------DDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAG 282
Query: 113 VLYSDKTLHHPNIVELRSAFASRSGQELF 141
+K +H ++R FA ++ F
Sbjct: 283 DTALNKNIHESVSAQIRKNFAKSKWRQAF 311
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 27 KYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
K DV S C GTP Y++PE L + YS D WS+G + Y ++ P
Sbjct: 171 KMEGKGDVMSTAC---------GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
Query: 87 FFSKHIS 93
F+ ++ S
Sbjct: 222 FYDENDS 228
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ + H NIV L + S L+LV++L G+L I E K E + RQ
Sbjct: 75 RKIKHENIVALEDIY--ESPNHLYLVMQLVSGGELFDRIVE----KGFYTEKDASTLIRQ 128
Query: 178 IAAALQYVHSRRILHR 193
+ A+ Y+H I+HR
Sbjct: 129 VLDAVYYLHRMGIVHR 144
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 119 NALSYCHSKRVIHR 132
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 154 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 160 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 220 RVEFTFPDFV 229
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 70 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 123
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 124 NALSYCHSKRVIHR 137
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 159 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 225 RVEFTFPDFV 234
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + QK E +Y ++A
Sbjct: 69 LRHPNILRLYGYF--HDATRVYLILEYAPLG----TVYRELQKLSRFDEQRTATYITELA 122
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 123 NALSYCHSKRVIHR 136
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ D+ GT Y+ PE ++ + D+WSLG + YE + PF
Sbjct: 158 WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE----VDSFLGTPYYMSPERLK 60
+S D+ GT Y+ PE ++ + D+WSLG + YE + F Y + R+
Sbjct: 164 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 224 RVEFTFPDFV 233
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 67 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 120
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 121 NALSYCHSKRVIHR 134
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 156 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 162 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 221
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 222 RVEFTFPDFV 231
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 68 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 121
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 122 NALSYCHSKRVIHR 135
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 157 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 223 RVEFTFPDFV 232
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 82 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 135
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 136 NALSYCHSKRVIHR 149
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 171 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 223
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 177 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 236
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 237 RVEFTFPDFV 246
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 66 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 119
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 120 NALSYCHSKRVIHR 133
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ D+ GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 155 WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S D+ GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 161 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 221 RVEFTFPDFV 230
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 66 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 119
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 120 NALSYCHSKRVIHR 133
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 155 WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLKELKYSFPS 68
GT Y+ PE ++ + D+WSLG + YE F Y + +R+ ++++FP
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 228
Query: 69 DV 70
V
Sbjct: 229 FV 230
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 70 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 123
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 124 NALSYCHSKRVIHR 137
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 159 WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLKELKYSFPS 68
GT Y+ PE ++ + D+WSLG + YE F Y + +R+ ++++FP
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 69 DV 70
V
Sbjct: 233 FV 234
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 119 NALSYCHSKRVIHR 132
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 154 WSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLKELKYSFPS 68
GT Y+ PE ++ + D+WSLG + YE F Y + +R+ ++++FP
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
Query: 69 DV 70
V
Sbjct: 228 FV 229
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 64 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 117
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 118 NALSYCHSKRVIHR 131
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 153 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 205
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 159 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 218
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 219 RVEFTFPDFV 228
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 68 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 121
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 122 NALSYCHSKRVIHR 135
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 157 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 223 RVEFTFPDFV 232
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 119 NALSYCHSKRVIHR 132
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 154 WSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLKELKYSFPS 68
GT Y+ PE ++ + D+WSLG + YE F Y + +R+ ++++FP
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
Query: 69 DV 70
V
Sbjct: 228 FV 229
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E DQ DL + L L+ SY Q
Sbjct: 60 KELNHPNIVKLLDVIHTEN--KLYLVFEHVDQ-DLKKFMDASALTGIPLP--LIKSYLFQ 114
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 115 LLQGLAFCHSHRVLHR 130
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 119 NALSYCHSKRVIHR 132
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 154 WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLKELKYSFPS 68
GT Y+ PE ++ + D+WSLG + YE F Y + +R+ ++++FP
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
Query: 69 DV 70
V
Sbjct: 228 FV 229
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 67 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 120
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 121 NALSYCHSKRVIHR 134
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 156 WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLKELKYSFPS 68
GT Y+ PE ++ + D+WSLG + YE F Y + +R+ ++++FP
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 229
Query: 69 DV 70
V
Sbjct: 230 FV 231
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 119 NALSYCHSKRVIHR 132
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 154 WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLKELKYSFPS 68
GT Y+ PE ++ + D+WSLG + YE F Y + +R+ ++++FP
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
Query: 69 DV 70
V
Sbjct: 228 FV 229
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 68 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 121
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 122 NALSYCHSKRVIHR 135
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 157 WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 163 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 223 RVEFTFPDFV 232
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
T +Y +PE L + Y+ P D+WS+GC+ EM + P F + + L K ++ PP
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPP 231
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSF------P 67
T +Y +PE L + Y+ P D+WS+GC+ E+ F P + +L F P
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM--FRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 68 SDVW 71
D W
Sbjct: 232 EDDW 235
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 70 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 123
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 124 NALSYCHSKRVIHR 137
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 159 WSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 165 SSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 225 RVEFTFPDFV 234
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 119 NALSYCHSKRVIHR 132
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 154 WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 160 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 220 RVEFTFPDFV 229
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ LHH N++ L + +R+ ++ L+LEL G+L +A+ K L+E S+ +Q
Sbjct: 71 QVLHH-NVITLHDVYENRT--DVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQ 123
Query: 178 IAAALQYVHSRRILH 192
I + Y+H+++I H
Sbjct: 124 ILDGVNYLHTKKIAH 138
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 66 FPSDVWS 72
F + +S
Sbjct: 237 FDEEFFS 243
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 119 NALSYCHSKRVIHR 132
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 154 WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLKELKYSFPS 68
GT Y+ PE ++ + D+WSLG + YE F Y + +R+ ++++FP
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
Query: 69 DV 70
V
Sbjct: 228 FV 229
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 118 KTLHHPNIVELR---SAFASRSGQEL-FLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K L+HPN+V R + +L L +E + GDL + + + C L E + +
Sbjct: 67 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF-ENCCGLKEGPIRT 125
Query: 174 YFRQIAAALQYVHSRRILHR 193
I++AL+Y+H RI+HR
Sbjct: 126 LLSDISSALRYLHENRIIHR 145
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
F+GT Y++PE L++ KY+ D WS G + +E + PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 224
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
F+GT Y++PE L++ KY+ D WS G + +E
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 215
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 118 KTLHHPNIVELR---SAFASRSGQEL-FLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K L+HPN+V R + +L L +E + GDL + + + C L E + +
Sbjct: 68 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF-ENCCGLKEGPIRT 126
Query: 174 YFRQIAAALQYVHSRRILHR 193
I++AL+Y+H RI+HR
Sbjct: 127 LLSDISSALRYLHENRIIHR 146
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
F+GT Y++PE L++ KY+ D WS G + +E + PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 225
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
F+GT Y++PE L++ KY+ D WS G + +E
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 216
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
T +Y +PE L + Y+ P D+WS+GC+ EM + P F + + L K ++ PP
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPP 231
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSF------P 67
T +Y +PE L + Y+ P D+WS+GC+ E+ F P + +L F P
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM--FRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 68 SDVW 71
D W
Sbjct: 232 EDDW 235
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 68 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 121
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 122 NALSYCHSKRVIHR 135
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLKELKYSFPS 68
GT Y+ PE ++ + D+WSLG + YE F Y + +R+ ++++FP
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 69 DV 70
V
Sbjct: 231 FV 232
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 157 WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F ++L+LE A G + + QK E +Y ++A
Sbjct: 62 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 115
Query: 180 AALQYVHSRRILHR 193
AL Y HS+R++HR
Sbjct: 116 NALSYCHSKRVIHR 129
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 151 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 203
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
+S + GT Y+ PE ++ + D+WSLG + YE F Y + +R+
Sbjct: 157 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 216
Query: 61 ELKYSFPSDV 70
++++FP V
Sbjct: 217 RVEFTFPDFV 226
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+ +PE L+E +S SDVWS G +L+E+ SF PY P
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIP 210
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSG 112
+ +PE L+E +S SDVWS G +L+E+ + + + I L + R+E P G
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPR-IPLKDVVPRVEKGYKMDAPDG 229
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
T +Y +PE L + Y+ P D+WS+GC+ EM + P F + + L K ++ PP
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPP 239
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSF------P 67
T +Y +PE L + Y+ P D+WS+GC+ E+ F P + +L F P
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM--FRRKPLFCGNSEADQLGKIFDLIGLPP 239
Query: 68 SDVW 71
D W
Sbjct: 240 EDDW 243
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP Y++P + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++P + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 120 LHHPNIV-------------ELRSAFASRSGQE-LFLVLELADQGDLALVIAECRQKKCH 165
L H NIV E S +SRS + LF+ +E D+G L I + R +K
Sbjct: 61 LDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-- 118
Query: 166 LAECLVWSYFRQIAAALQYVHSRRILHR 193
L + L F QI + Y+HS+++++R
Sbjct: 119 LDKVLALELFEQITKGVDYIHSKKLINR 146
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
GT YMSPE++ Y D+++LG +L E++ + F L I +F
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDK 242
Query: 109 LPSGVLY---SDKTLHHPNIVEL 128
+L S K PN E+
Sbjct: 243 KEKTLLQKLLSKKPEDRPNTSEI 265
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWS 72
GT YMSPE++ Y D+++LG +L E+ T + S + +L+ SD++
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-KFFTDLRDGIISDIFD 241
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
S + T +Y +PE L + Y+ P D+WS+GC+ EM + P F ++ L K +++
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIG 236
Query: 106 FPPLPSGVLYSDKTLHHPNIVEL-RSAFASRSGQEL 140
P P V L R AF S+S Q +
Sbjct: 237 LP----------GEEDWPRDVALPRQAFHSKSAQPI 262
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 7 SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
++ S + T +Y +PE L + Y+ P D+WS+GC+ E+
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 112 GVLYSDKTLHHPNIVELRSA-FASRSGQE--LFLVLELADQGDLALVIAECRQKKCHLAE 168
VL +T HPN+V L SR+ +E L LV E DQ DL + + + E
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP-TE 120
Query: 169 CLVWSYFRQIAAALQYVHSRRILHR 193
+ F Q+ L ++HS R++HR
Sbjct: 121 TIKDMMF-QLLRGLDFLHSHRVVHR 144
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE L + YS D WS+G + Y + G P + E++ + +Y F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL--LCGYPPFYDENDAKLFEQILKAEYEF 237
Query: 67 PSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI--EMALFPPLPSGVLYSDKTLHH 122
S W + ++ + F +H+ KR E AL P +G DK +H
Sbjct: 238 DSPYW-------DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQ 288
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 27 KYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
K P V S C GTP Y++PE L + YS D WS+G + Y ++ P
Sbjct: 167 KMEDPGSVLSTAC---------GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 87 FFSKH 91
F+ ++
Sbjct: 218 FYDEN 222
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
+ HPNIV L + SG L+L+++L G+L I E K E Q+
Sbjct: 73 IKHPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVL 126
Query: 180 AALQYVHSRRILHR 193
A++Y+H I+HR
Sbjct: 127 DAVKYLHDLGIVHR 140
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ LHH N++ L + +R+ ++ L+LEL G+L +A+ K L+E S+ +Q
Sbjct: 71 QVLHH-NVITLHDVYENRT--DVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQ 123
Query: 178 IAAALQYVHSRRILH 192
I + Y+H+++I H
Sbjct: 124 ILDGVNYLHTKKIAH 138
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 66 FPSDVWS 72
F + +S
Sbjct: 237 FDEEFFS 243
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
+ + T +Y PE + EL ++ P DVWS+GC+L+E
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 231
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 79
+ + T +Y PE + EL ++ P DVWS+GC+L+E
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 231
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
S + T +Y +PE L + Y+ P D+WS+GC+ EM + P F ++ L K +++
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIG 236
Query: 106 FPPLPSGVLYSDKTLHHPNIVEL-RSAFASRSGQEL 140
P P V L R AF S+S Q +
Sbjct: 237 LP----------GEEDWPRDVALPRQAFHSKSAQPI 262
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 7 SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
++ S + T +Y +PE L + Y+ P D+WS+GC+ E+
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 112 GVLYSDKTLHHPNIVELRSA-FASRSGQE--LFLVLELADQGDLALVIAECRQKKCHLAE 168
VL +T HPN+V L SR+ +E L LV E DQ DL + + + E
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP-TE 120
Query: 169 CLVWSYFRQIAAALQYVHSRRILHR 193
+ F Q+ L ++HS R++HR
Sbjct: 121 TIKDMMF-QLLRGLDFLHSHRVVHR 144
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
+ + T +Y PE + EL ++ P DVWS+GC+L+E
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 240
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 79
+ + T +Y PE + EL ++ P DVWS+GC+L+E
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 240
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ LHH N++ L + +R+ ++ L+LEL G+L +A+ K L+E S+ +Q
Sbjct: 71 QVLHH-NVITLHDVYENRT--DVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQ 123
Query: 178 IAAALQYVHSRRILH 192
I + Y+H+++I H
Sbjct: 124 ILDGVNYLHTKKIAH 138
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 66 FPSDVWS 72
F + +S
Sbjct: 237 FDEEFFS 243
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ LHH N++ L + +R+ ++ L+LEL G+L +A+ K L+E S+ +Q
Sbjct: 71 QVLHH-NVITLHDVYENRT--DVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQ 123
Query: 178 IAAALQYVHSRRILH 192
I + Y+H+++I H
Sbjct: 124 ILDGVNYLHTKKIAH 138
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 66 FPSDVWS 72
F + +S
Sbjct: 237 FDEEFFS 243
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
+ + T +Y PE + EL ++ P DVWS+GC+L+E
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 263
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 79
+ + T +Y PE + EL ++ P DVWS+GC+L+E
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 263
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPL 109
T YY +PE + + Y D+WS+GC++ EMV F ++ K IE L P
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVC-HKILFPGRDYIDQWNKVIEQ-LGTPC 245
Query: 110 PSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
P+ + T+ N VE R +A S ++LF
Sbjct: 246 PAFMKKLQPTVR--NYVENRPKYAGYSFEKLF 275
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D ++ E ++ S
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM--------S 129
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 164
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
T YY +PE + + Y D+WS+GC++ E+
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ LHH N++ L + +R+ ++ L+LEL G+L +A+ K L+E S+ +Q
Sbjct: 71 QVLHH-NVITLHDVYENRT--DVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQ 123
Query: 178 IAAALQYVHSRRILH 192
I + Y+H+++I H
Sbjct: 124 ILDGVNYLHTKKIAH 138
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 66 FPSDVWS 72
F + +S
Sbjct: 237 FDEEFFS 243
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
S + T +Y +PE L + Y+ P D+WS+GC+ EM + P F ++ L K +++
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIG 236
Query: 106 FPPLPSGVLYSDKTLHHPNIVEL-RSAFASRSGQEL 140
P P V L R AF S+S Q +
Sbjct: 237 LP----------GEEDWPRDVALPRQAFHSKSAQPI 262
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 7 SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
++ S + T +Y +PE L + Y+ P D+WS+GC+ E+
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 112 GVLYSDKTLHHPNIVELRSA-FASRSGQE--LFLVLELADQGDLALVIAECRQKKCHLAE 168
VL +T HPN+V L SR+ +E L LV E DQ DL + + + E
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP-TE 120
Query: 169 CLVWSYFRQIAAALQYVHSRRILHR 193
+ F Q+ L ++HS R++HR
Sbjct: 121 TIKDMMF-QLLRGLDFLHSHRVVHR 144
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE LK+ ++ SD+WS G VL+E+ S PY
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 230
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE LK+ ++ SD+WS G VL+E+ +L
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSL 225
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+MSPE LK+ ++ SDVWS G VL+E+ + PY
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 226
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+MSPE LK+ ++ SDVWS G VL+E+ L + P+
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 226
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE LK+ ++ SD+WS G VL+E+ S PY
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE LK+ ++ SD+WS G VL+E+ +L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE LK+ ++ SD+WS G VL+E+ S PY
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE LK+ ++ SD+WS G VL+E+ +L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+MSPE LK+ ++ SDVWS G VL+E+ + PY
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 235
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+MSPE LK+ ++ SDVWS G VL+E+ L + P+
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+MSPE LK+ ++ SDVWS G VL+E+ + PY
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 231
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+MSPE LK+ ++ SDVWS G VL+E+ L + P+
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 231
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+MSPE LK+ ++ SDVWS G VL+E+ + PY
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 234
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+MSPE LK+ ++ SDVWS G VL+E+ L + P+
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 234
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 26/106 (24%)
Query: 13 GTPYYMSPER----LKELKYSFPSDVWSLGCVLYEV-------DSFLGTPYYMSPERLKE 61
G YM+PER L + YS SD+WSLG + E+ DS+ GTP+ + ++E
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW-GTPFQQLKQVVEE 273
Query: 62 LKYSFPSDVWSLGCVLYEMVAL--------------QSPFFSKHIS 93
P+D +S V + L Q PFF+ H S
Sbjct: 274 PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES 319
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 36 SLGCVLYEVDSFL-----GTPYYMSPER----LKELKYSFPSDVWSLGCVLYEMVALQSP 86
G Y VDS G YM+PER L + YS SD+WSLG + E+ L+ P
Sbjct: 197 DFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 256
Query: 87 FFSKHISLNGLCKRIEMALFPPLPSGVLYSDK 118
+ S L + +E PS L +DK
Sbjct: 257 YDSWGTPFQQLKQVVEE------PSPQLPADK 282
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+MSPE LK+ ++ SDVWS G VL+E+ + PY
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 232
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+MSPE LK+ ++ SDVWS G VL+E+ L + P+
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 232
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+MSPE LK+ ++ SDVWS G VL+E+ + PY
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 235
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+MSPE LK+ ++ SDVWS G VL+E+ L + P+
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 235
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+MSPE LK+ ++ SDVWS G VL+E+ + PY
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 234
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+MSPE LK+ ++ SDVWS G VL+E+ L + P+
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 234
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE LK+ ++ SD+WS G VL+E+ S PY
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE LK+ ++ SD+WS G VL+E+ +L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE LK+ ++ SD+WS G VL+E+ S PY
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 232
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE LK+ ++ SD+WS G VL+E+ +L
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSL 227
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+MSPE LK+ ++ SDVWS G VL+E+ + PY
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 228
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+MSPE LK+ ++ SDVWS G VL+E+ L + P+
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 228
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE LK+ ++ SD+WS G VL+E+ S PY
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 234
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE LK+ ++ SD+WS G VL+E+ +L
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSL 229
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+MSPE LK+ ++ SDVWS G VL+E+ + PY
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 228
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+MSPE LK+ ++ SDVWS G VL+E+ L + P+
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 228
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE LK+ ++ SD+WS G VL+E+ S PY
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE LK+ ++ SD+WS G VL+E+ +L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 26/106 (24%)
Query: 13 GTPYYMSPER----LKELKYSFPSDVWSLGCVLYEV-------DSFLGTPYYMSPERLKE 61
G YM+PER L + YS SD+WSLG + E+ DS+ GTP+ + ++E
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW-GTPFQQLKQVVEE 229
Query: 62 LKYSFPSDVWSLGCVLYEMVAL--------------QSPFFSKHIS 93
P+D +S V + L Q PFF+ H S
Sbjct: 230 PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES 275
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 40 VLYEVDSFLGTPYYMSPER----LKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN 95
V ++D+ G YM+PER L + YS SD+WSLG + E+ L+ P+ S
Sbjct: 164 VAKDIDA--GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ 221
Query: 96 GLCKRIEMALFPPLPS 111
L + +E P LP+
Sbjct: 222 QLKQVVEEP-SPQLPA 236
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE LK+ ++ SD+WS G VL+E+ S PY
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE LK+ ++ SD+WS G VL+E+ +L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+MSPE LK+ ++ SDVWS G VL+E+ + PY
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 263
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+MSPE LK+ ++ SDVWS G VL+E+ L + P+
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 263
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 2 SVKTSSVDSFLGTPYYMSPERLKELKYSFP-SDVWSLGCVLYEVDSFLGTPYYMSPE--- 57
SV S S +GTP Y++PE L +Y +DVWS G LY + +G + PE
Sbjct: 168 SVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVM--LVGAYPFEDPEEPR 225
Query: 58 -------RLKELKYSFPSDV 70
R+ +KYS P D+
Sbjct: 226 DYRKTIQRILSVKYSIPDDI 245
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFP-SDVWSLGCVLYEMVALQSPF 87
S +GTP Y++PE L +Y +DVWS G LY M+ PF
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF 218
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
+ + ++L HPNIV + + + L +++E A G+L I C + +E
Sbjct: 67 IINHRSLRHPNIVRFKEVILTPT--HLAIIMEYASGGELYERI--CNAGR--FSEDEARF 120
Query: 174 YFRQIAAALQYVHSRRILHR 193
+F+Q+ + + Y HS +I HR
Sbjct: 121 FFQQLLSGVSYCHSMQICHR 140
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L H NIV L S ++L LV E DQ DL C L +V S+ Q
Sbjct: 56 KELKHKNIVRLHDVL--HSDKKLTLVFEFCDQ-DLKKYFDSCNGD---LDPEIVKSFLFQ 109
Query: 178 IAAALQYVHSRRILHR 193
+ L + HSR +LHR
Sbjct: 110 LLKGLGFCHSRNVLHR 125
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 50 TPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
T +Y P+ L K YS D+WS GC+ E+ P F + ++ KRI L P
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-DVDDQLKRIFRLLGTP 222
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+MSPE LK+ ++ SDVWS G VL+E+ + PY
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 241
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+MSPE LK+ ++ SDVWS G VL+E+ L
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATL 236
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K LHHPNIV L S L LV E ++ DL V+ E K L + + Y Q
Sbjct: 74 KELHHPNIVSLIDVIHSERC--LTLVFEFMEK-DLKKVLDE---NKTGLQDSQIKIYLYQ 127
Query: 178 IAAALQYVHSRRILHRGERETFLSVLGD 205
+ + + H RILHR + L + D
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSD 155
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 50 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
T +Y +P+ L KYS D+WS+GC+ EM+ P F
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT-GKPLF 220
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 14 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
T +Y +P+ L KYS D+WS+GC+ E+ G P +
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEM--ITGKPLF 220
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K LHHPNIV L S + L LV E ++ DL V+ E K L + + Y Q
Sbjct: 74 KELHHPNIVSLIDVIHSE--RCLTLVFEFMEK-DLKKVLDE---NKTGLQDSQIKIYLYQ 127
Query: 178 IAAALQYVHSRRILHRGERETFLSVLGD 205
+ + + H RILHR + L + D
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSD 155
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 50 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
T +Y +P+ L KYS D+WS+GC+ EM+ P F
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT-GKPLF 220
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 14 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
T +Y +P+ L KYS D+WS+GC+ E+ G P +
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEM--ITGKPLF 220
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L H NIV L S ++L LV E DQ DL C L +V S+ Q
Sbjct: 56 KELKHKNIVRLHDVL--HSDKKLTLVFEFCDQ-DLKKYFDSCNGD---LDPEIVKSFLFQ 109
Query: 178 IAAALQYVHSRRILHR 193
+ L + HSR +LHR
Sbjct: 110 LLKGLGFCHSRNVLHR 125
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 50 TPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI 101
T +Y P+ L K YS D+WS GC+ E+ P F + ++ KRI
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGN-DVDDQLKRI 215
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
GTP ++PE + Y+ D W+LG ++YEM A PFF+
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP ++PE + Y+ D W+LG ++YE+ + G P + + E++ K F
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA--GYPPFFADQPIQIYEKIVSGKVRF 257
Query: 67 PS 68
PS
Sbjct: 258 PS 259
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+MSPE LK+ ++ SDVWS G VL+E+ + PY
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 241
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+MSPE LK+ ++ SDVWS G VL+E+ L + P+
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 241
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
SF GT YM+PE + +S +D WS G +++EM+ PF K
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGK 233
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 24/133 (18%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV--------------------DSFLG 49
SF GT YM+PE + +S +D WS G +++E+ + LG
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLG 248
Query: 50 TPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
P ++S E L+ F + LG ++ F I N L +R + PP
Sbjct: 249 MPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRR---EIKPP 305
Query: 109 LPSGVLYSDKTLH 121
V D T +
Sbjct: 306 FKPAVAQPDDTFY 318
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+PE L + Y+ SDVWS G +L+E+ + G+PY P
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +L+E+ L SP+
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 46 SFLGTP-----YYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TP YY +PE + + Y D+WS+GC++ EM+ F ++ K
Sbjct: 179 SFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPGTDHIDQWNKV 237
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFL-VLELADQGDLALVIAEC 159
IE L P P + T+ VE R +A S ++LF VL AD AL ++
Sbjct: 238 IEQ-LGTPCPEFMKKLQPTVR--TYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQA 294
Query: 160 RQKKCHLAECLVWSYFRQIAA--ALQY 184
R L++ LV ++I+ ALQ+
Sbjct: 295 RDL---LSKMLVIDASKRISVDEALQH 318
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D ++ E ++ S
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM--------S 129
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 164
Score = 33.5 bits (75), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTP-----YYMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TP YY +PE + + Y D+WS+GC++ E+
Sbjct: 179 SFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HPNI+ L F + ++L+LE A G + QK E +Y ++A
Sbjct: 65 LRHPNILRLYGYFHDST--RVYLILEYAPLG----TVYRELQKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
AL Y HS++++HR
Sbjct: 119 NALSYCHSKKVIHR 132
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 35 WSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
WS+ + GT Y+ PE ++ + D+WSLG + YE + + PF
Sbjct: 154 WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLKELKYSFPS 68
GT Y+ PE ++ + D+WSLG + YE F Y + +R+ ++++FP
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPD 227
Query: 69 DV 70
V
Sbjct: 228 FV 229
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 12/81 (14%)
Query: 49 GTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
G+P Y +PE + Y+ P D+WS G +LY ++ PF H+ LF
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP----------TLFK 226
Query: 108 PLPSGVLYSDKTLHHPNIVEL 128
+ G+ Y+ + L +P+++ L
Sbjct: 227 KICDGIFYTPQYL-NPSVISL 246
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K HP+I++L ++ S ++F+V+E G+L I K L E F+Q
Sbjct: 71 KLFRHPHIIKLYQVISTPS--DIFMVMEYVSGGELFDYIC----KNGRLDEKESRRLFQQ 124
Query: 178 IAAALQYVHSRRILHR 193
I + + Y H ++HR
Sbjct: 125 ILSGVDYCHRHMVVHR 140
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 21/78 (26%)
Query: 13 GTPYYMSPERLKELKYSFPS-DVWSLGCVLYEV--------------------DSFLGTP 51
G+P Y +PE + Y+ P D+WS G +LY + D TP
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP 236
Query: 52 YYMSPERLKELKYSFPSD 69
Y++P + LK+ D
Sbjct: 237 QYLNPSVISLLKHMLQVD 254
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+M PE + K++ SDVWSLG VL+E+ ++ P+Y
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 232
Score = 33.5 bits (75), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEM 80
+M PE + K++ SDVWSLG VL+E+
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEI 223
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+PE L + Y+ SDVWS G +L+E+ + G+PY P
Sbjct: 203 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 242
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +L+E+ L SP+
Sbjct: 203 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+PE L + Y+ SDVWS G +L+E+ + G+PY P
Sbjct: 210 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 249
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +L+E+ L SP+
Sbjct: 210 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 16/84 (19%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK----- 63
++ T +Y +PE L KY+ D+WSLGC+L E+ G P + + +L+
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEI--LCGKPIFPGSSTMNQLERIIGV 246
Query: 64 YSFPSDVWSLGCVLYEMVALQSPF 87
FPS+ ++ ++QSPF
Sbjct: 247 IDFPSN--------EDVESIQSPF 262
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
H NIV L + + + ++++LV + + DL VI + H + +V+ Q+
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVIRANILEPVH-KQYVVY----QLIKV 121
Query: 182 LQYVHSRRILHRGERETFLSVLGDCVRTVSE 212
++Y+HS +LHR + + + + +C V++
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVAD 152
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+PE L + Y+ SDVWS G +L+E+ + G+PY P
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +L+E+ L SP+
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+PE L + Y+ SDVWS G +L+E+ + G+PY P
Sbjct: 211 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 250
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +L+E+ L SP+
Sbjct: 211 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
E+ +GTP Y++PE L + +D+W++G + Y ++ SPF +
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE 236
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLY 42
+GTP Y++PE L + +D+W++G + Y
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAY 224
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+PE L + Y+ SDVWS G +L+E+ + G+PY P
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +L+E+ L SP+
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+PE L + Y+ SDVWS G +L+E+ + G+PY P
Sbjct: 207 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 246
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +L+E+ L SP+
Sbjct: 207 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
HP ++ L F ++ G L L L Q DL I E K L E +F Q+ AA
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQ-DLFDYITE----KGPLGEGPSRCFFGQVVAA 151
Query: 182 LQYVHSRRILHR 193
+Q+ HSR ++HR
Sbjct: 152 IQHCHSRGVVHR 163
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
F GT Y PE + +Y + P+ VWSLG +LY+MV PF
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF 239
Score = 33.5 bits (75), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 10 SFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPS 68
F GT Y PE + +Y + P+ VWSLG +LY D G + + + E + FP+
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLY--DMVCGDIPFERDQEILEAELHFPA 254
Query: 69 DVWSLGCVL 77
V C L
Sbjct: 255 HVSPDCCAL 263
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+PE L + Y+ SDVWS G +L+E+ + G+PY P
Sbjct: 259 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +L+E+ L SP+
Sbjct: 259 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 232
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYEL 228
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 140
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 141 ICKGMEYLGTKRYIHR 156
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+PE L + Y+ SDVWS G +L+E+ + G+PY P
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +L+E+ L SP+
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + YS SDVWS G +L+E+ S G+PY
Sbjct: 267 WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY 302
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMAL 105
+M+PE + + YS SDVWS G +L+E+ +L SP+ + + C R+ +
Sbjct: 267 WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDED-FCSRLREGM 319
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 232
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYEL 228
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 140
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 141 ICKGMEYLGTKRYIHR 156
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 213 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 245
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 213 FWYAPESLTESKFSVASDVWSFGVVLYEL 241
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 97 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 153
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 154 ICKGMEYLGTKRYIHR 169
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
T +++PE LK Y D+WSLG +LY M+A +PF
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
HPNI+ L+ + G+ ++LV EL G+L I RQK +E I
Sbjct: 79 QHPNIITLKDVYDD--GKHVYLVTELMRGGELLDKI--LRQK--FFSEREASFVLHTIGK 132
Query: 181 ALQYVHSRRILHR 193
++Y+HS+ ++HR
Sbjct: 133 TVEYLHSQGVVHR 145
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE--------RLKELKYS 65
T +++PE LK Y D+WSLG +LY + + TP+ P R+ K++
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGY-TPFANGPSDTPEEILTRIGSGKFT 246
Query: 66 FPSDVWS 72
W+
Sbjct: 247 LSGGNWN 253
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYEL 213
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIK---LLQYTSQ 125
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 126 ICKGMEYLGTKRYIHR 141
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 188 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 220
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 188 FWYAPESLTESKFSVASDVWSFGVVLYEL 216
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 72 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 128
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 129 ICKGMEYLGTKRYIHR 144
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 189 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 221
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 189 FWYAPESLTESKFSVASDVWSFGVVLYEL 217
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 73 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 129
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 130 ICKGMEYLGTKRYIHR 145
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYEL 213
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + ++ H+ + Y Q
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIK---LLQYTSQ 125
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 126 ICKGMEYLGTKRYIHR 141
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 180 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 212
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 180 FWYAPESLTESKFSVASDVWSFGVVLYEL 208
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 120
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 121 ICKGMEYLGTKRYIHR 136
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYEL 210
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 122
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 123 ICKGMEYLGTKRYIHR 138
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYEL 210
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 122
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 123 ICKGMEYLGTKRYIHR 138
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
T +++PE LK Y D+WSLG +LY M+A +PF
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
HPNI+ L+ + G+ ++LV EL G+L I RQK +E I
Sbjct: 79 QHPNIITLKDVY--DDGKHVYLVTELMRGGELLDKI--LRQK--FFSEREASFVLHTIGK 132
Query: 181 ALQYVHSRRILHR 193
++Y+HS+ ++HR
Sbjct: 133 TVEYLHSQGVVHR 145
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE--------RLKELKYS 65
T +++PE LK Y D+WSLG +LY + + TP+ P R+ K++
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGY-TPFANGPSDTPEEILTRIGSGKFT 246
Query: 66 FPSDVWS 72
W+
Sbjct: 247 LSGGNWN 253
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYEL 210
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 122
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 123 ICKGMEYLGTKRYIHR 138
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 187 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 219
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 187 FWYAPESLTESKFSVASDVWSFGVVLYEL 215
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 71 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 127
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 128 ICKGMEYLGTKRYIHR 143
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 186 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 218
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 186 FWYAPESLTESKFSVASDVWSFGVVLYEL 214
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 126
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 127 ICKGMEYLGTKRYIHR 142
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 183 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 215
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 183 FWYAPESLTESKFSVASDVWSFGVVLYEL 211
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 123
Query: 178 IAAALQYVHSRRILHRG 194
I ++Y+ ++R +HR
Sbjct: 124 ICKGMEYLGTKRYIHRN 140
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP---ERLKELKYSF------- 66
+M+PE + Y+F SDVWS G L+E+ S +PY P + K +K F
Sbjct: 229 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 288
Query: 67 -PSDVWSLGCVLYEMVALQSPFFSKHISL 94
P++++ + ++ L+ P F + + L
Sbjct: 289 APAEMYDIMKTCWDADPLKRPTFKQIVQL 317
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 181 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 213
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 181 FWYAPESLTESKFSVASDVWSFGVVLYEL 209
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 121
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 122 ICKGMEYLGTKRYIHR 137
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 60 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKTFMDASALTGIPLP--LIKSYLFQ 114
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 115 LLQGLAFCHSHRVLHR 130
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL 48
++ +PE L E K+S SDVWS G VLYE+ +++
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L E K+S SDVWS G VLYE+
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYEL 213
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L H NIV+ + S + L L++E G L + + +++ H+ + Y Q
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK---LLQYTSQ 125
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ ++R +HR
Sbjct: 126 ICKGMEYLGTKRYIHR 141
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP---ERLKELKYSF------- 66
+M+PE + Y+F SDVWS G L+E+ S +PY P + K +K F
Sbjct: 213 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 272
Query: 67 -PSDVWSLGCVLYEMVALQSPFFSKHISL 94
P++++ + ++ L+ P F + + L
Sbjct: 273 APAEMYDIMKTCWDADPLKRPTFKQIVQL 301
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L H NIV+L ++ + L LV E DQ DL ++ C + L S+ Q
Sbjct: 55 KELKHSNIVKLYDVIHTK--KRLVLVFEHLDQ-DLKKLLDVC---EGGLESVTAKSFLLQ 108
Query: 178 IAAALQYVHSRRILHR 193
+ + Y H RR+LHR
Sbjct: 109 LLNGIAYCHDRRVLHR 124
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 50 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
T +Y +P+ L KYS D+WS+GC+ EMV +P F
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLF 201
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 14 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
T +Y +P+ L KYS D+WS+GC+ E+ + GTP +
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN--GTPLF 201
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGL 97
++ +PE LKE K+ + SDVWS G LYE++ S H L
Sbjct: 179 FWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTEL 224
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSF 47
++ +PE LKE K+ + SDVWS G LYE+ ++
Sbjct: 179 FWYAPECLKECKFYYASDVWSFGVTLYELLTY 210
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKC-HLAECLVWSYFR 176
+TL+H +IV+ + + + + LV+E G L + + C LA+ L+++ +
Sbjct: 65 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP----RHCVGLAQLLLFA--Q 118
Query: 177 QIAAALQYVHSRRILHRG 194
QI + Y+H++ +HR
Sbjct: 119 QICEGMAYLHAQHYIHRA 136
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 231
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 232 IEQ-LGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 269
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM--------S 123
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 158
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGL 97
++ +PE LKE K+ + SDVWS G LYE++ S H L
Sbjct: 180 FWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTEL 225
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSF 47
++ +PE LKE K+ + SDVWS G LYE+ ++
Sbjct: 180 FWYAPECLKECKFYYASDVWSFGVTLYELLTY 211
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKC-HLAECLVWSYFR 176
+TL+H +IV+ + + + + LV+E G L + + C LA+ L+++ +
Sbjct: 66 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP----RHCVGLAQLLLFA--Q 119
Query: 177 QIAAALQYVHSRRILHRG 194
QI + Y+H++ +HR
Sbjct: 120 QICEGMAYLHAQHYIHRA 137
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 178 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 236
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 237 IEQ-LGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 274
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 77 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM--------S 128
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 129 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 163
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 178 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 217
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 49 GTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
G+P Y +PE + Y+ P D+WS G +LY ++ PF +H+ LF
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP----------TLFK 221
Query: 108 PLPSGVLY 115
+ GV Y
Sbjct: 222 KIRGGVFY 229
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K HP+I++L ++ + + F+V+E G+L I C+ + + E F+Q
Sbjct: 66 KLFRHPHIIKLYQVISTPT--DFFMVMEYVSGGELFDYI--CKHGR--VEEMEARRLFQQ 119
Query: 178 IAAALQYVHSRRILHR 193
I +A+ Y H ++HR
Sbjct: 120 ILSAVDYCHRHMVVHR 135
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 13 GTPYYMSPERLKELKYSFPS-DVWSLGCVLY 42
G+P Y +PE + Y+ P D+WS G +LY
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILY 202
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 238
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 239 IEQ-LGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 276
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM--------S 130
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 165
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L H NIV+L ++ + L LV E DQ DL ++ C + L S+ Q
Sbjct: 55 KELKHSNIVKLYDVIHTK--KRLVLVFEHLDQ-DLKKLLDVC---EGGLESVTAKSFLLQ 108
Query: 178 IAAALQYVHSRRILHR 193
+ + Y H RR+LHR
Sbjct: 109 LLNGIAYCHDRRVLHR 124
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 50 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
T +Y +P+ L KYS D+WS+GC+ EMV +P F
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLF 201
Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 14 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
T +Y +P+ L KYS D+WS+GC+ E+ + GTP +
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN--GTPLF 201
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP---ERLKELKYSF------- 66
+M+PE + Y+F SDVWS G L+E+ S +PY P + K +K F
Sbjct: 231 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 290
Query: 67 -PSDVWSLGCVLYEMVALQSPFFSKHISL 94
P++++ + ++ L+ P F + + L
Sbjct: 291 APAEMYDIMKTCWDADPLKRPTFKQIVQL 319
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 237
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 238 IE-QLGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 275
Score = 33.9 bits (76), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM--------S 129
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGD 205
Y Q+ ++++HS I+HR + + + V D
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 237
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 238 IEQ-LGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 275
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM--------S 129
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 164
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP---ERLKELKYSF------- 66
+M+PE + Y+F SDVWS G L+E+ S +PY P + K +K F
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 295
Query: 67 -PSDVWSLGCVLYEMVALQSPFFSKHISL 94
P++++ + ++ L+ P F + + L
Sbjct: 296 APAEMYDIMKTCWDADPLKRPTFKQIVQL 324
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L H NIV+L ++ + L LV E DQ DL ++ C + L S+ Q
Sbjct: 55 KELKHSNIVKLYDVIHTK--KRLVLVFEHLDQ-DLKKLLDVC---EGGLESVTAKSFLLQ 108
Query: 178 IAAALQYVHSRRILHR 193
+ + Y H RR+LHR
Sbjct: 109 LLNGIAYCHDRRVLHR 124
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 50 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
T +Y +P+ L KYS D+WS+GC+ EMV +P F
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GAPLF 201
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 14 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
T +Y +P+ L KYS D+WS+GC+ E+ + G P +
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN--GAPLF 201
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 231
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 232 IEQ-LGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 269
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM--------S 123
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 158
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 238
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 239 IEQ-LGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 276
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM--------S 130
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 165
Score = 33.5 bits (75), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
SF GT YM+PE + ++ +D WS G +++EM+ PF K
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 230
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 28/123 (22%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV--------------------DSFLG 49
SF GT YM+PE + ++ +D WS G +++E+ + LG
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 245
Query: 50 TPYYMSPERLKELKYSF---PSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
P ++SPE L+ F P++ G E + S FFS I N L +R +
Sbjct: 246 MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHS-FFST-IDWNKLYRR---EIH 300
Query: 107 PPL 109
PP
Sbjct: 301 PPF 303
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
+F GT YM+PE L ++ D WSLG ++Y+M+ PF ++
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+F GT YM+PE L ++ D WSLG ++Y D G P + R K +
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMY--DMLTGAPPFTGENRKKTI 230
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
+ HP IV+L AF ++G +L+L+LE G+L + + +++ E Y +I+
Sbjct: 78 VKHPFIVDLIYAF--QTGGKLYLILEYLSGGELFMQL----EREGIFMEDTACFYLAEIS 131
Query: 180 AALQYVHSRRILHR 193
AL ++H + I++R
Sbjct: 132 MALGHLHQKGIIYR 145
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 230
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 231 IE-QLGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 268
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM--------S 122
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 157
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP---ERLKELKYSF------- 66
+M+PE + Y+F SDVWS G L+E+ S +PY P + K +K F
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 295
Query: 67 -PSDVWSLGCVLYEMVALQSPFFSKHISL 94
P++++ + ++ L+ P F + + L
Sbjct: 296 APAEMYDIMKTCWDADPLKRPTFKQIVQL 324
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 49 GTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
G+P Y +PE + Y+ P D+WS G +LY ++ PF +H+ LF
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP----------TLFK 221
Query: 108 PLPSGVLY 115
+ GV Y
Sbjct: 222 KIRGGVFY 229
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K HP+I++L ++ + + F+V+E G+L I C+ + + E F+Q
Sbjct: 66 KLFRHPHIIKLYQVISTPT--DFFMVMEYVSGGELFDYI--CKHGR--VEEMEARRLFQQ 119
Query: 178 IAAALQYVHSRRILHR 193
I +A+ Y H ++HR
Sbjct: 120 ILSAVDYCHRHMVVHR 135
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 13 GTPYYMSPERLKELKYSFPS-DVWSLGCVLY 42
G+P Y +PE + Y+ P D+WS G +LY
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILY 202
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 237
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 238 IE-QLGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 275
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM--------S 129
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 164
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L HP +V L +F +++F+V++L GDL + Q+ H E V + ++
Sbjct: 72 LEHPFLVNLWYSFQDE--EDMFMVVDLLLGGDLRYHL----QQNVHFKEETVKLFICELV 125
Query: 180 AALQYVHSRRILHR 193
AL Y+ ++RI+HR
Sbjct: 126 MALDYLQNQRIIHR 139
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 43 EVDSFLGTPYYMSPERLKELK---YSFPSDVWSLGCVLYEMVALQSPF 87
++ + GT YM+PE K YSF D WSLG YE++ + P+
Sbjct: 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 1 MSVKTSSVDSFLGTPYYMSPERLKELK---YSFPSDVWSLGCVLYEVDSFLG-TPYYM-S 55
M + + + + GT YM+PE K YSF D WSLG YE+ G PY++ S
Sbjct: 164 MLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYEL--LRGRRPYHIRS 221
Query: 56 PERLKELKYSFPSDV------WSLGCVLYEMVAL 83
KE+ ++F + V WS EMV+L
Sbjct: 222 STSSKEIVHTFETTVVTYPSAWS-----QEMVSL 250
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 64 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 118
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 119 LLQGLAFCHSHRVLHR 134
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 173 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 211
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 173 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEM 204
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
SF GT YM+PE + ++ +D WS G +++EM+ PF K
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 28/123 (22%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV--------------------DSFLG 49
SF GT YM+PE + ++ +D WS G +++E+ + LG
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244
Query: 50 TPYYMSPERLKELKYSF---PSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
P ++SPE L+ F P++ G E + S FFS I N L +R +
Sbjct: 245 MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHS-FFST-IDWNKLYRR---EIH 299
Query: 107 PPL 109
PP
Sbjct: 300 PPF 302
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN++ L + +++ ++ L+ EL G+L +AE K L E + +Q
Sbjct: 69 KEIQHPNVITLHEVYENKT--DVILIGELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
I + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 43 EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
E + GTP +++PE + +D+WS+G + Y +++ SPF
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
+ GTP +++PE + +D+WS+G + Y + S FLG + + + Y
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 66 FPSDVWSLGCVL 77
F + +S L
Sbjct: 236 FEDEYFSNTSAL 247
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
GTP Y++PE L + YS D WS+G + Y + G P + E++KE Y F
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYIL--LCGYPPFYEETESKLFEKIKEGYYEF 226
Query: 67 PSDVWS 72
S W
Sbjct: 227 ESPFWD 232
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
GTP Y++PE L + YS D WS+G + Y ++ PF+ +
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE 210
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + H NIV L + S + +LV++L G+L I E R LV +Q
Sbjct: 61 KKIKHENIVTLEDIYESTT--HYYLVMQLVSGGELFDRILE-RGVYTEKDASLV---IQQ 114
Query: 178 IAAALQYVHSRRILHR 193
+ +A++Y+H I+HR
Sbjct: 115 VLSAVKYLHENGIVHR 130
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 64 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 118
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 119 LLQGLAFCHSHRVLHR 134
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 173 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 211
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 173 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 204
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L + Y+ SDVWS G +++E+ + G+PY
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +++E+ L SP+
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L + Y+ SDVWS G +++E+ + G+PY
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +++E+ L SP+
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L + Y+ SDVWS G +++E+ + G+PY
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +++E+ L SP+
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF + + L +
Sbjct: 188 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVR 245
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 193 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRREPFFHGQDNYDQL 243
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L + Y+ SDVWS G +++E+ + G+PY
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +++E+ L SP+
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 275
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 276 IEQ-LGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 313
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER--------MS 167
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 275
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 276 IEQ-LGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 313
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER--------MS 167
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
Score = 33.5 bits (75), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 237
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 238 IE-QLGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 275
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM--------S 129
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGD 205
Y Q+ ++++HS I+HR + + + V D
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L + Y+ SDVWS G +++E+ + G+PY
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +++E+ L SP+
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L + Y+ SDVWS G +++E+ + G+PY
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +++E+ L SP+
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L + Y+ SDVWS G +++E+ + G+PY
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +++E+ L SP+
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L + Y+ SDVWS G +++E+ + G+PY
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +++E+ L SP+
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L + Y+ SDVWS G +++E+ + G+PY
Sbjct: 217 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +++E+ L SP+
Sbjct: 217 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L + Y+ SDVWS G +++E+ + G+PY
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +++E+ L SP+
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L + Y+ SDVWS G +++E+ + G+PY
Sbjct: 212 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +++E+ L SP+
Sbjct: 212 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L + Y+ SDVWS G +++E+ + G+PY
Sbjct: 271 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +++E+ L SP+
Sbjct: 271 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 61 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 115
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 116 LLQGLAFCHSHRVLHR 131
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 201
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 230
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 231 IE-QLGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 268
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM--------S 122
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGD 205
Y Q+ ++++HS I+HR + + + V D
Sbjct: 123 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 155
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L + Y+ SDVWS G +++E+ + G+PY
Sbjct: 214 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE L + Y+ SDVWS G +++E+ L SP+
Sbjct: 214 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 57 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 111
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 112 LLQGLSFCHSHRVLHR 127
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
+GT YMSPE++ YS D++SLG +L+E++ PF ++ + L + FP
Sbjct: 191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTD-VRNLKFP 246
Query: 108 PL 109
PL
Sbjct: 247 PL 248
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVW 71
+GT YMSPE++ YS D++SLG +L+E L P+ ER++ L +DV
Sbjct: 191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE----LLYPFSTQMERVRTL-----TDVR 241
Query: 72 SL 73
+L
Sbjct: 242 NL 243
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 13/104 (12%)
Query: 120 LHHPNIVELRSAFASRSGQE----------LFLVLELADQGDLA-LVIAECRQKKCHLAE 168
L HP IV +A+ ++ E L++ ++L + +L + C ++ +
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 169 CLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSE 212
CL F QIA A++++HS+ ++HR + + + D V V +
Sbjct: 120 CL--HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD 161
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 237
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 238 IE-QLGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 275
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM--------S 129
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGD 205
Y Q+ ++++HS I+HR + + + V D
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 43 EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
E + + + Y+ PE L + + Y + D+WSLGC+L M+ + PFF + + L +
Sbjct: 193 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVR 250
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 12 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+ + Y+ PE L + + Y + D+WSLGC+L + F P++ + +L
Sbjct: 198 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRREPFFHGQDNYDQL 248
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 34 VWSLGCVLYEVD---SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
V G Y+ + + + T +Y +PE + L +S P DVWS+GC+L E L F
Sbjct: 178 VVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYY-LGFTVFPT 236
Query: 91 HISLNGLCKRIEMALFPPLPSGVLYSD---KTLHHPNI 125
H S L + + PLP ++ K HH +
Sbjct: 237 HDSKEHLA--MMERILGPLPKHMIQKTRKRKYFHHDRL 272
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
+ + T +Y +PE + L +S P DVWS+GC+L E
Sbjct: 193 TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELKYS 65
+GTPYY+SP+ L+ L Y D WS G ++Y + G P + +P +++E ++
Sbjct: 169 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVL--LCGYPPFSAPTDXEVMLKIREGTFT 225
Query: 66 FPSDVW 71
FP W
Sbjct: 226 FPEKDW 231
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L HPNI+ L F + +++LV+EL G+L + R E +
Sbjct: 61 KSLDHPNIIRLYETFEDNT--DIYLVMELCTGGELFERVVHKRV----FRESDAARIMKD 114
Query: 178 IAAALQYVHSRRILHRGER-ETFL 200
+ +A+ Y H + HR + E FL
Sbjct: 115 VLSAVAYCHKLNVAHRDLKPENFL 138
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+GTPYY+SP+ L+ L Y D WS G ++Y ++ PF
Sbjct: 169 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 59 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 113
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 114 LLQGLAFCHSHRVLHR 129
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 59 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 113
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 114 LLQGLAFCHSHRVLHR 129
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 60 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 114
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 115 LLQGLAFCHSHRVLHR 130
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 57 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 111
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 112 LLQGLAFCHSHRVLHR 127
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 60 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 114
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 115 LLQGLAFCHSHRVLHR 130
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 59 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 113
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 114 LLQGLAFCHSHRVLHR 129
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 58 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 112
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 113 LLQGLAFCHSHRVLHR 128
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 57 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 111
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 112 LLQGLAFCHSHRVLHR 127
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 56 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 110
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 111 LLQGLAFCHSHRVLHR 126
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 58 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 112
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 113 LLQGLAFCHSHRVLHR 128
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELKYS 65
+GTPYY+SP+ L+ L Y D WS G ++Y + G P + +P +++E ++
Sbjct: 186 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVL--LCGYPPFSAPTDXEVMLKIREGTFT 242
Query: 66 FPSDVW 71
FP W
Sbjct: 243 FPEKDW 248
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K+L HPNI+ L F + +++LV+EL G+L + R E +
Sbjct: 78 KSLDHPNIIRLYETFEDNT--DIYLVMELCTGGELFERVVHKRV----FRESDAARIMKD 131
Query: 178 IAAALQYVHSRRILHRGER-ETFL 200
+ +A+ Y H + HR + E FL
Sbjct: 132 VLSAVAYCHKLNVAHRDLKPENFL 155
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+GTPYY+SP+ L+ L Y D WS G ++Y ++ PF
Sbjct: 186 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 38 GCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMV 81
C + + ++ T YY +PE + + Y+ D+WS+GC++ E+V
Sbjct: 176 ACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELV 219
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM--------S 129
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDC 206
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Query: 6 SSVDSFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
++ +F+ TPY Y +PE + + Y+ D+WS+GC++ E+
Sbjct: 175 TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGEL 218
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 56 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 110
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 111 LLQGLAFCHSHRVLHR 126
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 237
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ N VE R +A + +LF
Sbjct: 238 IE-QLGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 275
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM--------S 129
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGD 205
Y Q+ ++++HS I+HR + + + V D
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 162
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 58 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 112
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 113 LLQGLAFCHSHRVLHR 128
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 57 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 111
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 112 LLQGLAFCHSHRVLHR 127
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
SF GT YM+PE + ++ +D WS G +++EM+ PF K
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 28/134 (20%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV--------------------DSFLG 49
SF GT YM+PE + ++ +D WS G +++E+ + LG
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244
Query: 50 TPYYMSPERLKELKYSF---PSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
P ++SPE L+ F P++ G E + S FFS I N L +R F
Sbjct: 245 MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHS-FFST-IDWNKLYRREIHPPF 302
Query: 107 PPL---PSGVLYSD 117
P P Y D
Sbjct: 303 KPATGRPEDTFYFD 316
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 57 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 111
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 112 LLQGLAFCHSHRVLHR 127
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 166 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 204
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 166 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEM 197
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 58 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 112
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 113 LLQGLAFCHSHRVLHR 128
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 57 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 111
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 112 LLQGLAFCHSHRVLHR 127
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 57 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 111
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 112 LLQGLAFCHSHRVLHR 127
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 57 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 111
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 112 LLQGLAFCHSHRVLHR 127
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 56 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 110
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 111 LLQGLAFCHSHRVLHR 126
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 56 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 110
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 111 LLQGLAFCHSHRVLHR 126
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ L HP+I++L S+ E+ +V+E A ++ ++ ++E +F+Q
Sbjct: 69 RLLRHPHIIKLYDVIKSKD--EIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQ 121
Query: 178 IAAALQYVHSRRILHR 193
I +A++Y H +I+HR
Sbjct: 122 IISAVEYCHRHKIVHR 137
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 49 GTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
G+P Y +PE + Y+ P DVWS G +LY M+ + PF + I + L K I ++
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV--LFKNISNGVY 230
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 13 GTPYYMSPERLKELKYSFPS-DVWSLGCVLY 42
G+P Y +PE + Y+ P DVWS G +LY
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILY 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 57 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 111
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 112 LLQGLAFCHSHRVLHR 127
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 56 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 110
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 111 LLQGLAFCHSHRVLHR 126
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEMV----ALQSPFFSKHISLNGLCK 99
++ +PE LKE K+ + SDVWS G LYE++ + QSP +K + L G+ +
Sbjct: 202 FWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP-PTKFLELIGIAQ 252
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEV 44
++ +PE LKE K+ + SDVWS G LYE+
Sbjct: 202 FWYAPECLKEYKFYYASDVWSFGVTLYEL 230
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+TL+H +I++ + L LV+E G L + + LA+ L+++ +Q
Sbjct: 88 RTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP---RHSIGLAQLLLFA--QQ 142
Query: 178 IAAALQYVHSRRILHR 193
I + Y+H++ +HR
Sbjct: 143 ICEGMAYLHAQHYIHR 158
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP+IV+L +++++EL G+L + + R+ LA ++++Y Q
Sbjct: 94 RQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAY--Q 147
Query: 178 IAAALQYVHSRRILHR--GERETFLSVLGDCVR 208
++ AL Y+ S+R +HR R +S DCV+
Sbjct: 148 LSTALAYLESKRFVHRDIAARNVLVSS-NDCVK 179
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQ-SPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+PE + +++ SDVW G ++E++ PF + + N + RIE P+P
Sbjct: 206 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGERLPMPP 263
Query: 112 G---VLYSDKTL-------HHPNIVELRSAFAS 134
LYS T P EL++ ++
Sbjct: 264 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 296
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEV 44
+M+PE + +++ SDVW G ++E+
Sbjct: 206 WMAPESINFRRFTSASDVWMFGVCMWEI 233
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ L HP+I++L S+ E+ +V+E A ++ ++ ++E +F+Q
Sbjct: 59 RLLRHPHIIKLYDVIKSKD--EIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQ 111
Query: 178 IAAALQYVHSRRILHR 193
I +A++Y H +I+HR
Sbjct: 112 IISAVEYCHRHKIVHR 127
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 49 GTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
G+P Y +PE + Y+ P DVWS G +LY M+ + PF + I + L K I ++
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV--LFKNISNGVY 220
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 13 GTPYYMSPERLKELKYSFPS-DVWSLGCVLY 42
G+P Y +PE + Y+ P DVWS G +LY
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILY 194
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ L HP+I++L S+ E+ +V+E A ++ ++ ++E +F+Q
Sbjct: 63 RLLRHPHIIKLYDVIKSKD--EIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQ 115
Query: 178 IAAALQYVHSRRILHR 193
I +A++Y H +I+HR
Sbjct: 116 IISAVEYCHRHKIVHR 131
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 49 GTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
G+P Y +PE + Y+ P DVWS G +LY M+ + PF + I + L K I ++
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV--LFKNISNGVY 224
Score = 30.8 bits (68), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 13 GTPYYMSPERLKELKYSFPS-DVWSLGCVLY 42
G+P Y +PE + Y+ P DVWS G +LY
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILY 198
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 61 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQ 115
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 116 LLQGLAFCHSHRVLHR 131
Score = 33.9 bits (76), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 201
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ L HP+I++L S+ E+ +V+E A ++ ++ ++E +F+Q
Sbjct: 68 RLLRHPHIIKLYDVIKSKD--EIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQ 120
Query: 178 IAAALQYVHSRRILHR 193
I +A++Y H +I+HR
Sbjct: 121 IISAVEYCHRHKIVHR 136
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 49 GTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
G+P Y +PE + Y+ P DVWS G +LY M+ + PF + I + L K I ++
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV--LFKNISNGVY 229
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 13 GTPYYMSPERLKELKYSFPS-DVWSLGCVLY 42
G+P Y +PE + Y+ P DVWS G +LY
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILY 203
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ SPE + K++ SDVWS G VL+EV S+ PY+
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 223
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMA--LFPPL 109
+ SPE + K++ SDVWS G VL+E+++ + P++ +S + K ++ L PP+
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAVDEGYRLPPPM 244
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 56 KELNHPNIVKLLDVIHTEN--KLYLVFEHVHQ-DLKTFMDASALTGIPLP--LIKSYLFQ 110
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 111 LLQGLAFCHSHRVLHR 126
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
F GT YM+PE L ++ D WSLG ++Y+M+ PF ++
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
F GT YM+PE L ++ D WSLG ++Y D G P + R K +
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMY--DMLTGAPPFTGENRKKTI 230
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
+ HP IV+L AF ++G +L+L+LE G+L + + +++ E Y +I+
Sbjct: 78 VKHPFIVDLIYAF--QTGGKLYLILEYLSGGELFMQL----EREGIFMEDTACFYLAEIS 131
Query: 180 AALQYVHSRRILHR 193
AL ++H + I++R
Sbjct: 132 MALGHLHQKGIIYR 145
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY-YMSPERL 59
+M+ E L + Y+ SDVWS G +L+E+ + G PY + PERL
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+ E L + Y+ SDVWS G +L+E+V L
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
F+ T YY +PE + + Y D+WS+GC++ EM+ F ++ K IE L
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPGTDHIDQWNKVIEQ-LG 244
Query: 107 PPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
P P + T+ VE R +A S ++LF
Sbjct: 245 TPCPEFMKKLQPTVR--TYVENRPKYAGYSFEKLF 277
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D ++ E ++ S
Sbjct: 80 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM--------S 131
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 132 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 166
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
F+ T YY +PE + + Y D+WS+GC++ E+
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 220
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ SPE + K++ SDVWS G VL+EV S+ PY+
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 240
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMA--LFPPL 109
+ SPE + K++ SDVWS G VL+E+++ + P++ +S + K ++ L PP+
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAVDEGYRLPPPM 261
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ SPE + K++ SDVWS G VL+EV S+ PY+
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 223
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMA--LFPPL 109
+ SPE + K++ SDVWS G VL+E+++ + P++ +S + K ++ L PP+
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAVDEGYRLPPPM 244
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY-YMSPERL 59
+M+ E L + Y+ SDVWS G +L+E+ + G PY + PERL
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+ E L + Y+ SDVWS G +L+E+V L
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E Q DL + L L+ SY Q
Sbjct: 57 KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKDFMDASALTGIPLP--LIKSYLFQ 111
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 112 LLQGLAFCHSHRVLHR 127
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ SPE + K++ SDVWS G VL+EV S+ PY+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ SPE + K++ SDVWS G VL+E+++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP+IV+L +++++EL G+L + + R+ LA ++++Y Q
Sbjct: 66 RQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAY--Q 119
Query: 178 IAAALQYVHSRRILHR--GERETFLSVLGDCVR 208
++ AL Y+ S+R +HR R +S DCV+
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSS-NDCVK 151
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQ-SPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+PE + +++ SDVW G ++E++ PF + + N + RIE P+P
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGERLPMPP 235
Query: 112 G---VLYSDKTL-------HHPNIVELRSAFAS 134
LYS T P EL++ ++
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 268
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEV 44
+M+PE + +++ SDVW G ++E+
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 34 VWSLGCVLYE---VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
V G YE V + + + +Y +PE + +Y P D+WSLGC+L E++
Sbjct: 243 VIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+Y +PE + +Y P D+WSLGC+L E+
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAEL 292
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 42 YEVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLC 98
++ + G+ +M+PE R+++ YSF SDV++ G VLYE++ Q P+ ++N
Sbjct: 165 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS----NINNRD 220
Query: 99 KRIEM 103
+ IEM
Sbjct: 221 QIIEM 225
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 GTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
G+ +M+PE R+++ YSF SDV++ G VLYE+
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 42 YEVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLC 98
++ + G+ +M+PE R+++ YSF SDV++ G VLYE++ Q P+ ++N
Sbjct: 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS----NINNRD 232
Query: 99 KRIEM 103
+ IEM
Sbjct: 233 QIIEM 237
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 GTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
G+ +M+PE R+++ YSF SDV++ G VLYE+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP+IV+L +++++EL G+L + + R+ LA ++++Y Q
Sbjct: 66 RQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAY--Q 119
Query: 178 IAAALQYVHSRRILHR--GERETFLSVLGDCVR 208
++ AL Y+ S+R +HR R +S DCV+
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSS-NDCVK 151
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQ-SPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+PE + +++ SDVW G ++E++ PF + + N + RIE P+P
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGERLPMPP 235
Query: 112 G---VLYSDKTL-------HHPNIVELRSAFAS 134
LYS T P EL++ ++
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 268
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEV 44
+M+PE + +++ SDVW G ++E+
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + K+S SD+WS G VL+EV S+ PY
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEM 80
+M+PE + K+S SD+WS G VL+E+
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 34 VWSLGCVLYE---VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
V G YE V + + + +Y +PE + +Y P D+WSLGC+L E++
Sbjct: 243 VIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+Y +PE + +Y P D+WSLGC+L E+
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAEL 292
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 256
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------------KCHLAE 168
HH N+V L A ++ G L ++ E G+L+ + R + K L
Sbjct: 80 HHLNVVNLLGA-CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 169 CLVWSYFRQIAAALQYVHSRRILHR 193
+ Y Q+A ++++ SR+ +HR
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHR 163
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY-YMSPERL 59
+M+ E L + Y+ SDVWS G +L+E+ + G PY + PERL
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 41 LYEVDSFLGTPY------YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+YE DS++ +M+ E L + Y+ SDVWS G +L+E+V L
Sbjct: 200 VYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 42 YEVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLC 98
++ + G+ +M+PE R+++ YSF SDV++ G VLYE++ Q P+ ++N
Sbjct: 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS----NINNRD 232
Query: 99 KRIEM 103
+ IEM
Sbjct: 233 QIIEM 237
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 GTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
G+ +M+PE R+++ YSF SDV++ G VLYE+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
++ +PE LKE K+ + SDVWS G LYE++
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEV 44
++ +PE LKE K+ + SDVWS G LYE+
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYEL 213
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+TL+H +I++ + + + L LV+E G L + + LA+ L+++ +Q
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP---RHSIGLAQLLLFA--QQ 125
Query: 178 IAAALQYVHSRRILHRG 194
I + Y+H++ +HR
Sbjct: 126 ICEGMAYLHAQHYIHRN 142
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 256
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------------KCHLAE 168
HH N+V L A ++ G L +++E G+L+ + R + K L
Sbjct: 80 HHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 169 CLVWSYFRQIAAALQYVHSRRILHR 193
+ Y Q+A ++++ SR+ +HR
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHR 163
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + K+S SD+WS G VL+EV S+ PY
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEM 80
+M+PE + K+S SD+WS G VL+E+
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
++ +PE LKE K+ + SDVWS G LYE++
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEV 44
++ +PE LKE K+ + SDVWS G LYE+
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYEL 213
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+TL+H +I++ + + + L LV+E G L + + LA+ L+++ +Q
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP---RHSIGLAQLLLFA--QQ 125
Query: 178 IAAALQYVHSRRILHRG 194
I + Y+HS+ +HR
Sbjct: 126 ICEGMAYLHSQHYIHRN 142
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 50 TPYYMSPERLKELKYSFP----SDVWSLGCVLYEMVALQSPF 87
TP Y +PE + +L +FP D+W+LGC+LY + Q PF
Sbjct: 213 TPMYRTPE-IIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF 253
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 14 TPYYMSPERLKELKYSFP----SDVWSLGCVLYEVDSFLGTPYYMSPE-RLKELKYSFP 67
TP Y +PE + +L +FP D+W+LGC+LY + F P+ + R+ KYS P
Sbjct: 213 TPMYRTPE-IIDLYSNFPIGEKQDIWALGCILYLL-CFRQHPFEDGAKLRIVNGKYSIP 269
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ SPE + K++ SDVWS G VL+EV S+ PY+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ SPE + K++ SDVWS G VL+E+++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ SPE + K++ SDVWS G VL+EV S+ PY+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ SPE + K++ SDVWS G VL+E+++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ SPE + K++ SDVWS G VL+EV S+ PY+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ SPE + K++ SDVWS G VL+E+++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ SPE + K++ SDVWS G VL+EV S+ PY+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMA--LFPPL 109
+ SPE + K++ SDVWS G VL+E+++ + P++ +S + K ++ L PP+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAVDEGYRLPPPM 273
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ SPE + K++ SDVWS G VL+EV S+ PY+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMA--LFPPL 109
+ SPE + K++ SDVWS G VL+E+++ + P++ +S + K ++ L PP+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAVDEGYRLPPPM 273
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ SPE + K++ SDVWS G VL+EV S+ PY+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMA--LFPPL 109
+ SPE + K++ SDVWS G VL+E+++ + P++ +S + K ++ L PP+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAVDEGYRLPPPM 273
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC-HKILFPGRDYIDQWNKV 231
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ VE R +A S ++LF
Sbjct: 232 IEQ-LGTPCPEFMKKLQPTVR--TYVENRPKYAGYSFEKLF 269
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D ++ E ++ S
Sbjct: 72 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM--------S 123
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 158
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 212
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 256
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------------KCHLAE 168
HH N+V L A ++ G L ++ E G+L+ + R + K L
Sbjct: 80 HHLNVVNLLGA-CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 169 CLVWSYFRQIAAALQYVHSRRILHR 193
+ Y Q+A ++++ SR+ +HR
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHR 163
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ SPE + K++ SDVWS G VL+EV S+ PY+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ SPE + K++ SDVWS G VL+E+++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ SPE + K++ SDVWS G VL+EV S+ PY+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMA--LFPPL 109
+ SPE + K++ SDVWS G VL+E+++ + P++ +S + K ++ L PP+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAVDEGYRLPPPM 273
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP+IV+L +++++EL G+L + + R+ LA ++++Y Q
Sbjct: 71 RQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAY--Q 124
Query: 178 IAAALQYVHSRRILHR--GERETFLSVLGDCVR 208
++ AL Y+ S+R +HR R +S DCV+
Sbjct: 125 LSTALAYLESKRFVHRDIAARNVLVSS-NDCVK 156
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQ-SPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+PE + +++ SDVW G ++E++ PF + + N + RIE P+P
Sbjct: 183 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGERLPMPP 240
Query: 112 G---VLYSDKTL-------HHPNIVELRSAFAS 134
LYS T P EL++ ++
Sbjct: 241 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 273
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEV 44
+M+PE + +++ SDVW G ++E+
Sbjct: 183 WMAPESINFRRFTSASDVWMFGVCMWEI 210
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EM+ F ++ K
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPGTDHIDQWNKV 238
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ VE R +A S ++LF
Sbjct: 239 IEQ-LGTPCPEFMKKLQPTVR--TYVENRPKYAGYSFEKLF 276
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D ++ E ++ S
Sbjct: 79 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM--------S 130
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 165
Score = 33.5 bits (75), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EM+ F ++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPGTDHIDQWNKV 237
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ VE R +A S ++LF
Sbjct: 238 IEQ-LGTPCPEFMKKLQPTVR--TYVENRPKYAGYSFEKLF 275
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D ++ E ++ S
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM--------S 129
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 164
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 265
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK----------KCHLAECL 170
HH N+V L A ++ G L +++E G+L+ + R + K L
Sbjct: 91 HHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEH 149
Query: 171 VWSYFRQIAAALQYVHSRRILHR 193
+ Y Q+A ++++ SR+ +HR
Sbjct: 150 LIXYSFQVAKGMEFLASRKXIHR 172
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 261
Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK--------KCHLAECLVW 172
HH N+V L A ++ G L +++E G+L+ + R + K L +
Sbjct: 89 HHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+A ++++ SR+ +HR
Sbjct: 148 CYSFQVAKGMEFLASRKXIHR 168
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
Score = 33.9 bits (76), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+M+PE + + Y+ SDVWS G +L+E+ +L SP+
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK--------KCHLAECLVW 172
HH N+V L A ++ G L +++E G+L+ + R + K L +
Sbjct: 89 HHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+A ++++ SR+ +HR
Sbjct: 148 XYSFQVAKGMEFLASRKXIHR 168
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 256
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------------KCHLAE 168
HH N+V L A ++ G L ++ E G+L+ + R + K L
Sbjct: 80 HHLNVVNLLGA-CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 169 CLVWSYFRQIAAALQYVHSRRILHR 193
+ Y Q+A ++++ SR+ +HR
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHR 163
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 265
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------------KCHLAE 168
HH N+V L A ++ G L +++E G+L+ + R + K L
Sbjct: 89 HHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 169 CLVWSYFRQIAAALQYVHSRRILHR 193
+ Y Q+A ++++ SR+ +HR
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHR 172
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 259 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 294
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 259 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 308
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ SPE + K++ SDVWS G VL+EV S+ PY+
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 250
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMA--LFPPL 109
+ SPE + K++ SDVWS G VL+E+++ + P++ +S + K ++ L PP+
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAVDEGYRLPPPM 271
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP+IV+L +++++EL G+L + + R+ LA ++++Y Q
Sbjct: 69 RQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAY--Q 122
Query: 178 IAAALQYVHSRRILHR--GERETFLSVLGDCVR 208
++ AL Y+ S+R +HR R +S DCV+
Sbjct: 123 LSTALAYLESKRFVHRDIAARNVLVSS-NDCVK 154
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQ-SPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+PE + +++ SDVW G ++E++ PF + + N + RIE P+P
Sbjct: 181 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGERLPMPP 238
Query: 112 G---VLYSDKTL-------HHPNIVELRSAFAS 134
LYS T P EL++ ++
Sbjct: 239 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 271
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEV 44
+M+PE + +++ SDVW G ++E+
Sbjct: 181 WMAPESINFRRFTSASDVWMFGVCMWEI 208
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 35 WSLGCVLY-EVDSFLGTPYYMSPERLKELKYSFP-SDVWSLGCVLYEMVALQSPF 87
+S VL+ + S +GTP Y++PE L + +Y +DVWS G LY M+ PF
Sbjct: 163 YSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 2 SVKTSSVDSFLGTPYYMSPERLKELKYSFP-SDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
SV S S +GTP Y++PE L + +Y +DVWS G LY + +G + PE K
Sbjct: 167 SVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM--LVGAYPFEDPEEPK 224
Query: 61 ELKYSF 66
+ +
Sbjct: 225 NFRKTI 230
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
+ + ++L HPNIV + + + L +V+E A G+L I C + +E
Sbjct: 66 IINHRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERI--CNAGR--FSEDEARF 119
Query: 174 YFRQIAAALQYVHSRRILHR 193
+F+Q+ + + Y H+ ++ HR
Sbjct: 120 FFQQLISGVSYAHAMQVAHR 139
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 265
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 32/157 (20%)
Query: 63 KYSFPSDVWSLGCVLYEMV---ALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSD-- 117
K+ FP D +LG L +++ F I C+ + + + L G +S+
Sbjct: 22 KWEFPRDRLNLGKPLGRGAFGQVIEADAFG--IDKTATCRTVAVKM---LKEGATHSEHR 76
Query: 118 ------KTL----HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK----- 162
K L HH N+V L A ++ G L +++E G+L+ + R +
Sbjct: 77 ALMSELKILIHIGHHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 135
Query: 163 ------KCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
K L + Y Q+A ++++ SR+ +HR
Sbjct: 136 TPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 172
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 265
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------------KCHLAE 168
HH N+V L A ++ G L +++E G+L+ + R + K L
Sbjct: 89 HHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 169 CLVWSYFRQIAAALQYVHSRRILHR 193
+ Y Q+A ++++ SR+ +HR
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHR 172
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP+IV+L +++++EL G+L + + R+ LA ++++Y Q
Sbjct: 63 RQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFL-QVRKYSLDLASLILYAY--Q 116
Query: 178 IAAALQYVHSRRILHR--GERETFLSVLGDCVR 208
++ AL Y+ S+R +HR R +S DCV+
Sbjct: 117 LSTALAYLESKRFVHRDIAARNVLVSS-NDCVK 148
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQ-SPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+PE + +++ SDVW G ++E++ PF + + N + RIE P+P
Sbjct: 175 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGERLPMPP 232
Query: 112 G---VLYSDKTL-------HHPNIVELRSAFAS 134
LYS T P EL++ ++
Sbjct: 233 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 265
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEV 44
+M+PE + +++ SDVW G ++E+
Sbjct: 175 WMAPESINFRRFTSASDVWMFGVCMWEI 202
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 296
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 310
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
+F+ TPY Y +PE + + Y D+WS+GC++ E+V S F ++ K
Sbjct: 177 NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVK-GSVIFQGTDHIDQWNKV 235
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE PS + N VE R A+ + +ELF
Sbjct: 236 IEQL---GTPSAEFMAALQPTVRNYVENRPAYPGIAFEELF 273
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q+++LV+EL D ++ E ++ S
Sbjct: 76 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM--------S 127
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 128 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 162
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 4 KTSSVDSFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
+T+S + F+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 172 RTASTN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL 216
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 253 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 253 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 302
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------------KCHLAE 168
HH N+V L A ++ G L +++E G+L+ + R + K L
Sbjct: 126 HHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 184
Query: 169 CLVWSYFRQIAAALQYVHSRRILHR 193
+ Y Q+A ++++ SR+ +HR
Sbjct: 185 EHLICYSFQVAKGMEFLASRKCIHR 209
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EMV F ++ K
Sbjct: 184 SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC-HKILFPGRDYIDQWNKV 242
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ VE R +A S ++LF
Sbjct: 243 IEQ-LGTPCPEFMKKLQPTVR--TYVENRPKYAGYSFEKLF 280
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D ++ E ++ S
Sbjct: 83 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM--------S 134
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 135 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 169
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEV 44
SF+ TPY Y +PE + + Y D+WS+GC++ E+
Sbjct: 184 SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 223
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY--MSPERLKELKYSF-------- 66
+ +PE + K++ SDVWS G V++EV ++ PY+ + E +K + F
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDC 275
Query: 67 PSDVWSLGCVLYEMVALQSPFFSKHISL 94
PS ++ L ++ + P F+ +S+
Sbjct: 276 PSAIYQLMMQCWQQERARRPKFADIVSI 303
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 265
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------------KCHLAE 168
HH N+V L A ++ G L +++E G+L+ + R + K L
Sbjct: 89 HHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 169 CLVWSYFRQIAAALQYVHSRRILHR 193
+ Y Q+A ++++ SR+ +HR
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHR 172
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP+IV+L +++++EL G+L + + R+ LA ++++Y Q
Sbjct: 66 RQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAY--Q 119
Query: 178 IAAALQYVHSRRILHR--GERETFLSVLGDCVR 208
++ AL Y+ S+R +HR R +S DCV+
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSAT-DCVK 151
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQ-SPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+PE + +++ SDVW G ++E++ PF + + N + RIE P+P
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGERLPMPP 235
Query: 112 G---VLYSDKTL-------HHPNIVELRSAFAS 134
LYS T P EL++ ++
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 268
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEV 44
+M+PE + +++ SDVW G ++E+
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP+IV+L +++++EL G+L + + R+ LA ++++Y Q
Sbjct: 68 RQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFL-QVRKYSLDLASLILYAY--Q 121
Query: 178 IAAALQYVHSRRILHR--GERETFLSVLGDCVR 208
++ AL Y+ S+R +HR R +S DCV+
Sbjct: 122 LSTALAYLESKRFVHRDIAARNVLVSS-NDCVK 153
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQ-SPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+PE + +++ SDVW G ++E++ PF + + N + RIE P+P
Sbjct: 180 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGERLPMPP 237
Query: 112 G---VLYSDKTL-------HHPNIVELRSAFAS 134
LYS T P EL++ ++
Sbjct: 238 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 270
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEV 44
+M+PE + +++ SDVW G ++E+
Sbjct: 180 WMAPESINFRRFTSASDVWMFGVCMWEI 207
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 218 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 218 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 267
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------------KCHLAE 168
HH N+V L A ++ G L +++E G+L+ + R + K L
Sbjct: 91 HHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTL 149
Query: 169 CLVWSYFRQIAAALQYVHSRRILHR 193
+ Y Q+A ++++ SR+ +HR
Sbjct: 150 EHLICYSFQVAKGMEFLASRKCIHR 174
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSFP 67
+GT YY++PE L Y DVWS G +LY + S F G Y +++++ KY+F
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 68 SDVW 71
W
Sbjct: 271 LPQW 274
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L HPNI++L F + +LV E+ G+L +I+ R +E R
Sbjct: 104 KQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKR-----FSEVDAARIIR 156
Query: 177 QIAAALQYVHSRRILHR 193
Q+ + + Y+H +I+HR
Sbjct: 157 QVLSGITYMHKNKIVHR 173
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+GT YY++PE L Y DVWS G +LY +++ PF
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 250
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSFP 67
+GT YY++PE L Y DVWS G +LY + S F G Y +++++ KY+F
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 68 SDVW 71
W
Sbjct: 272 LPQW 275
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L HPNI++L F + +LV E+ G+L +I+ R +E R
Sbjct: 105 KQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKR-----FSEVDAARIIR 157
Query: 177 QIAAALQYVHSRRILHR 193
Q+ + + Y+H +I+HR
Sbjct: 158 QVLSGITYMHKNKIVHR 174
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+GT YY++PE L Y DVWS G +LY +++ PF
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 251
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+M PE + K++ SDVWS G VL+E+ ++ P+Y
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEM 80
+M PE + K++ SDVWS G VL+E+
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEI 230
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+M PE + K++ SDVWS G VL+E+ ++ P+Y
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEM 80
+M PE + K++ SDVWS G VL+E+
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEI 224
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 268 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 303
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 268 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 317
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSFP 67
+GT YY++PE L Y DVWS G +LY + S F G Y +++++ KY+F
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 68 SDVW 71
W
Sbjct: 248 LPQW 251
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L HPNI++L F + +LV E+ G+L +I+ R +E R
Sbjct: 81 KQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKR-----FSEVDAARIIR 133
Query: 177 QIAAALQYVHSRRILHR 193
Q+ + + Y+H +I+HR
Sbjct: 134 QVLSGITYMHKNKIVHR 150
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+GT YY++PE L Y DVWS G +LY +++ PF
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 227
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S +PY
Sbjct: 266 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 301
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
+M+PE + + Y+ SDVWS G +L+E+ +L SP+ I C+R++
Sbjct: 266 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 315
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 42 YEVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
++ + G+ +M+PE R+++ YSF SDV++ G VLYE++ Q P+
Sbjct: 189 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 GTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
G+ +M+PE R+++ YSF SDV++ G VLYE+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 42 YEVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
++ + G+ +M+PE R+++ YSF SDV++ G VLYE++ Q P+
Sbjct: 189 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 GTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
G+ +M+PE R+++ YSF SDV++ G VLYE+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 42 YEVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
++ + G+ +M+PE R+++ YSF SDV++ G VLYE++ Q P+
Sbjct: 188 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 GTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
G+ +M+PE R+++ YSF SDV++ G VLYE+
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 229
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSFP 67
+GT YY++PE L Y DVWS G +LY + S F G Y +++++ KY+F
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 68 SDVW 71
W
Sbjct: 248 LPQW 251
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+GT YY++PE L Y DVWS G +LY +++ PF
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 227
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L HPNI +L F + +LV E+ G+L +I+ R +E R
Sbjct: 81 KQLDHPNIXKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKR-----FSEVDAARIIR 133
Query: 177 QIAAALQYVHSRRILHR 193
Q+ + + Y H +I+HR
Sbjct: 134 QVLSGITYXHKNKIVHR 150
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 42 YEVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
++ + G+ +M+PE R+++ YSF SDV++ G VLYE++ Q P+
Sbjct: 181 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 GTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
G+ +M+PE R+++ YSF SDV++ G VLYE+
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 222
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+M PE + K++ SDVWS G VL+E+ ++ P+Y
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEM 80
+M PE + K++ SDVWS G VL+E+
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEI 253
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EM+ F ++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPGTDHIDQWNKV 237
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ VE R +A S ++LF
Sbjct: 238 IEQ-LGTPSPEFMKKLQPTVR--TYVENRPKYAGYSFEKLF 275
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D ++ E ++ S
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM--------S 129
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 164
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 27/78 (34%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYE-------------VDSF---- 47
SF+ TPY Y +PE + + Y D+WS+GC++ E +D +
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
Query: 48 --LGTPYYMSPERLKELK 63
LGTP SPE +K+L+
Sbjct: 239 EQLGTP---SPEFMKKLQ 253
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMV 81
SF+ TPY Y +PE + + Y D+WS+GC++ EM+
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 27/78 (34%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYE-------------VDSF---- 47
SF+ TPY Y +PE + + Y D+WS+GC++ E +D +
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
Query: 48 --LGTPYYMSPERLKELK 63
LGTP SPE +K+L+
Sbjct: 239 EQLGTP---SPEFMKKLQ 253
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D +L+ VI + L +
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI------QMELDHERMSY 130
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Q+ ++++HS I+HR + + + V D
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT 164
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EM+ F ++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPGTDHIDQWNKV 237
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ VE R +A S ++LF
Sbjct: 238 IEQ-LGTPSPEFMKKLQPTVR--TYVENRPKYAGYSFEKLF 275
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 27/78 (34%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYE-------------VDSF---- 47
SF+ TPY Y +PE + + Y D+WS+GC++ E +D +
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
Query: 48 --LGTPYYMSPERLKELK 63
LGTP SPE +K+L+
Sbjct: 239 EQLGTP---SPEFMKKLQ 253
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D +L+ VI + L +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI------QMELDHERMSY 130
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Q+ ++++HS I+HR + + + V DC
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 164
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 42 YEVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
++ + G+ +M+PE R+++ YSF SDV++ G VLYE++ Q P+
Sbjct: 166 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 GTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
G+ +M+PE R+++ YSF SDV++ G VLYE+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 207
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 42 YEVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
++ + G+ +M+PE R+++ YSF SDV++ G VLYE++ Q P+
Sbjct: 163 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 GTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
G+ +M+PE R+++ YSF SDV++ G VLYE+
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 204
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP+IV+L +++++EL G+L + + R+ LA ++++Y Q
Sbjct: 66 RQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAY--Q 119
Query: 178 IAAALQYVHSRRILHR--GERETFLSVLGDCVR 208
++ AL Y+ S+R +HR R +S DCV+
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSS-NDCVK 151
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQ-SPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+PE + +++ SDVW G ++E++ PF + + N + RIE P+P
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGERLPMPP 235
Query: 112 G---VLYSDKTL-------HHPNIVELRSAFAS 134
LYS T P EL++ ++
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 268
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEV 44
+M+PE + +++ SDVW G ++E+
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMV 81
SF+ TPY Y +PE + + Y D+WS+GC++ EM+
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 27/78 (34%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYE-------------VDSF---- 47
SF+ TPY Y +PE + + Y D+WS+GC++ E +D +
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
Query: 48 --LGTPYYMSPERLKELK 63
LGTP SPE +K+L+
Sbjct: 239 EQLGTP---SPEFMKKLQ 253
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D +L+ VI + L +
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI------QMELDHERMSY 130
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Q+ ++++HS I+HR + + + V D
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDAT 164
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
SF+ TPY Y +PE + + Y D+WS+GC++ EM+ F ++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPGTDHIDQWNKV 237
Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
IE L P P + T+ VE R +A S ++LF
Sbjct: 238 IEQ-LGTPSPEFMKKLQPTVR--TYVENRPKYAGYSFEKLF 275
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 27/78 (34%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYE-------------VDSF---- 47
SF+ TPY Y +PE + + Y D+WS+GC++ E +D +
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
Query: 48 --LGTPYYMSPERLKELK 63
LGTP SPE +K+L+
Sbjct: 239 EQLGTP---SPEFMKKLQ 253
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D +L+ VI + L +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI------QMELDHERMSY 130
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Q+ ++++HS I+HR + + + V D
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDAT 164
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFP-SDVWSLGCVLYEMVALQSPF 87
S +GTP Y++PE L + +Y +DVWS G LY M+ PF
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 216
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 2 SVKTSSVDSFLGTPYYMSPERLKELKYSFP-SDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
SV S S +GTP Y++PE L + +Y +DVWS G LY + +G + PE K
Sbjct: 166 SVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM--LVGAYPFEDPEEPK 223
Query: 61 ELKYSF 66
+ +
Sbjct: 224 NFRKTI 229
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
+ + ++L HPNIV + + + L +V+E A G+L I C + +E
Sbjct: 65 IINHRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERI--CNAGR--FSEDEARF 118
Query: 174 YFRQIAAALQYVHSRRILHR 193
+F+Q+ + + Y H+ ++ HR
Sbjct: 119 FFQQLISGVSYCHAMQVCHR 138
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 48 LGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
+GT YM+PE L K + Y +D +SLGC+L++++ SPF R+ + +
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 409
Query: 107 PPLPS 111
LP
Sbjct: 410 VELPD 414
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 12 LGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEV 44
+GT YM+PE L K + Y +D +SLGC+L+++
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 383
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP+IV+L +++++EL G+L + + R+ LA ++++Y Q
Sbjct: 446 RQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFL-QVRKFSLDLASLILYAY--Q 499
Query: 178 IAAALQYVHSRRILHR--GERETFLSVLGDCVR 208
++ AL Y+ S+R +HR R +S DCV+
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSAT-DCVK 531
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQ-SPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+PE + +++ SDVW G ++E++ PF + + N + RIE P+P
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGERLPMPP 615
Query: 112 G---VLYS 116
LYS
Sbjct: 616 NCPPTLYS 623
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEV 44
+M+PE + +++ SDVW G ++E+
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEI 585
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 48 LGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
+GT YM+PE L K + Y +D +SLGC+L++++ SPF R+ + +
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 107 PPLPS 111
LP
Sbjct: 411 VELPD 415
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 12 LGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEV 44
+GT YM+PE L K + Y +D +SLGC+L+++
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 42 YEVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
++ + G+ +M+PE R+++ YSF SDV++ G VLYE++ Q P+
Sbjct: 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 GTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
G+ +M+PE R+++ YSF SDV++ G VLYE+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 42 YEVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
++ + G+ +M+PE R+++ YSF SDV++ G VLYE++ Q P+
Sbjct: 166 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 GTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
G+ +M+PE R+++ YSF SDV++ G VLYE+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 207
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 42 YEVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
++ + G+ +M+PE R+++ YSF SDV++ G VLYE++ Q P+
Sbjct: 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 GTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
G+ +M+PE R+++ YSF SDV++ G VLYE+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 48 LGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
+GT YM+PE L K + Y +D +SLGC+L++++ SPF R+ + +
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 107 PPLPS 111
LP
Sbjct: 411 VELPD 415
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 12 LGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEV 44
+GT YM+PE L K + Y +D +SLGC+L+++
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 9 DSFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
D + T +Y +PE L ++KY DVW++GC++ E+ F+G P + + +L
Sbjct: 182 DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM--FMGEPLFPGDSDIDQL 234
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 45 DSFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGL 97
D + T +Y +PE L ++KY DVW++GC++ EM + P F ++ L
Sbjct: 182 DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF-MGEPLFPGDSDIDQL 234
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 48 LGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
+GT YM+PE L K + Y +D +SLGC+L++++ SPF R+ + +
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 107 PPLPS 111
LP
Sbjct: 411 VELPD 415
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 12 LGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEV 44
+GT YM+PE L K + Y +D +SLGC+L+++
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 42 YEVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
++ + G+ +M+PE R+++ YSF SDV++ G VLYE++ Q P+
Sbjct: 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 GTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
G+ +M+PE R+++ YSF SDV++ G VLYE+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L HP+I++L + + ++ +V+E A G+L I E K + E +F+Q
Sbjct: 64 KLLRHPHIIKLYDVITTPT--DIVMVIEYAG-GELFDYIVE----KKRMTEDEGRRFFQQ 116
Query: 178 IAAALQYVHSRRILHR 193
I A++Y H +I+HR
Sbjct: 117 IICAIEYCHRHKIVHR 132
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 49 GTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHI 92
G+P Y +PE + Y+ P DVWS G VLY M+ + PF + I
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI 213
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 13 GTPYYMSPERLKELKYSFPS-DVWSLGCVLY 42
G+P Y +PE + Y+ P DVWS G VLY
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLY 199
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 35 WSLGCVLY-EVDSFLGTPYYMSPERLKELKYSFP-SDVWSLGCVLYEMVALQSPF 87
+S VL+ + S +GTP Y++PE L + +Y +DVWS G LY M+ PF
Sbjct: 163 YSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 2 SVKTSSVDSFLGTPYYMSPERLKELKYSFP-SDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
SV S S +GTP Y++PE L + +Y +DVWS G LY + +G + PE K
Sbjct: 167 SVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM--LVGAYPFEDPEEPK 224
Query: 61 ELKYSF 66
+ +
Sbjct: 225 NFRKTI 230
Score = 33.5 bits (75), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
+ + ++L HPNIV + + + L +V+E A G+L I C + +E
Sbjct: 66 IINHRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERI--CNAGR--FSEDEARF 119
Query: 174 YFRQIAAALQYVHSRRILHR 193
+F+Q+ + + Y H+ ++ HR
Sbjct: 120 FFQQLISGVSYCHAMQVCHR 139
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFP-SDVWSLGCVLYEMVALQSPF 87
S +GTP Y++PE L + +Y +DVWS G LY M+ PF
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 2 SVKTSSVDSFLGTPYYMSPERLKELKYSFP-SDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
SV S S +GTP Y++PE L + +Y +DVWS G LY + +G + PE K
Sbjct: 167 SVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM--LVGAYPFEDPEEPK 224
Query: 61 ELKYSF 66
+ +
Sbjct: 225 NFRKTI 230
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
+ + ++L HPNIV + + + L +V+E A G+L I C + +E
Sbjct: 66 IINHRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERI--CNAGR--FSEDEARF 119
Query: 174 YFRQIAAALQYVHSRRILHR 193
+F+Q+ + + Y H+ ++ HR
Sbjct: 120 FFQQLISGVSYCHAMQVCHR 139
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ HP+IV+L +++++EL G+L + + R+ LA ++++Y Q
Sbjct: 446 RQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFL-QVRKFSLDLASLILYAY--Q 499
Query: 178 IAAALQYVHSRRILHR--GERETFLSVLGDCVR 208
++ AL Y+ S+R +HR R +S DCV+
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSS-NDCVK 531
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQ-SPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+PE + +++ SDVW G ++E++ PF + + N + RIE P+P
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGERLPMPP 615
Query: 112 G---VLYS 116
LYS
Sbjct: 616 NCPPTLYS 623
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEV 44
+M+PE + +++ SDVW G ++E+
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEI 585
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 118 KTLHHPNIVELRSAFAS--RSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
K L HPNIV ++ S + + + LV EL G L + + K + + S+
Sbjct: 80 KGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKV----LRSWC 135
Query: 176 RQIAAALQYVHSRR--ILHR 193
RQI LQ++H+R I+HR
Sbjct: 136 RQILKGLQFLHTRTPPIIHR 155
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+Y +PE + +Y P D+WSLGC+L E++
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLT 294
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+Y +PE + +Y P D+WSLGC+L E+
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAEL 292
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI 101
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F +N L + +
Sbjct: 207 EMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT-LFPGTDHINQLQQIM 265
Query: 102 EMALFPP 108
+ PP
Sbjct: 266 RLTGTPP 272
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K + H N++ L F + +++LV L DL ++ +C++ + L++
Sbjct: 105 KHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMG-ADLNNIV-KCQKLTDDHVQFLIY- 161
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
QI L+Y+HS I+HR + + L+V DC
Sbjct: 162 ---QILRGLKYIHSADIIHRDLKPSNLAVNEDC 191
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 11 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
++ T +Y +PE L + Y+ D+WS+GC++ E+ + F GT + +++ L +
Sbjct: 211 YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGT 270
Query: 66 FPSDVWS 72
P+ V S
Sbjct: 271 PPASVIS 277
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+ E L Y+ SDVWS G +L+E+ S GTPY
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 239
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+ E L Y+ SDVWS G +L+E+V+L +P+ C L+ LP
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY----------CGMTCAELYEKLPQ 253
Query: 112 G 112
G
Sbjct: 254 G 254
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 14/89 (15%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS---- 173
K HHPNI+ L A R L+L +E A G+L + + R + A + S
Sbjct: 78 KLGHHPNIINLLGACEHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 174 --------YFRQIAAALQYVHSRRILHRG 194
+ +A + Y+ ++ +HR
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQFIHRN 164
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY-YMSPERLKEL 62
+ +PE L K+S SDVW+ G +L+E+ ++ +PY + P ++ EL
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL 222
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ L + Q
Sbjct: 62 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA--TQ 117
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 118 ISSAMEYLEKKNFIHR 133
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
T +++PE L+ Y D+WSLG +LY M+ +PF
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
Score = 33.5 bits (75), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE--------RLKELKYS 65
T +++PE L+ Y D+WSLG +LY + + TP+ P+ R+ K+S
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGY-TPFANGPDDTPEEILARIGSGKFS 241
Query: 66 FPSDVWS 72
W+
Sbjct: 242 LSGGYWN 248
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 52 YYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
+Y +PE L +Y+ D+WS+GCV E++ L P FS S++ L + I++ P
Sbjct: 206 FYRAPELMLGATEYTPSIDLWSIGCVFGELI-LGKPLFSGETSIDQLVRIIQIMGTP 261
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 16 YYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
+Y +PE L +Y+ D+WS+GCV E+ LG P + + +L
Sbjct: 206 FYRAPELMLGATEYTPSIDLWSIGCVFGEL--ILGKPLFSGETSIDQL 251
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY-YMSPERLKEL 62
+ +PE L K+S SDVW+ G +L+E+ ++ +PY + P ++ EL
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL 222
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L ++++E G+L + EC +++ L + Q
Sbjct: 62 KEIKHPNLVQLLGVCTREP--PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMA--TQ 117
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 118 ISSAMEYLEKKNFIHR 133
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE L E Y+ SDVWS G +L+E+ S PY
Sbjct: 240 WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE L E Y+ SDVWS G +L+E+ +L
Sbjct: 240 WMAPESLFEGIYTIKSDVWSYGILLWEIFSL 270
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ L H N+++L + Q++++V+E G + ++ +K+ C YF Q
Sbjct: 61 RRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKR--FPVCQAHGYFCQ 117
Query: 178 IAAALQYVHSRRILHR 193
+ L+Y+HS+ I+H+
Sbjct: 118 LIDGLEYLHSQGIVHK 133
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 13 GTPYYMSPERLKELKY--SFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSF 66
G+P + PE L F D+WS G LY + + F G Y E + + Y+
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI 232
Query: 67 PSD 69
P D
Sbjct: 233 PGD 235
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+ E L Y+ SDVWS G +L+E+ S GTPY
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 232
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+ E L Y+ SDVWS G +L+E+V+L +P+ C L+ LP
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY----------CGMTCAELYEKLPQ 246
Query: 112 G 112
G
Sbjct: 247 G 247
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS---- 173
K HHPNI+ L A R L+L +E A G+L + + R + A + S
Sbjct: 71 KLGHHPNIINLLGACEHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 174 --------YFRQIAAALQYVHSRRILHR 193
+ +A + Y+ ++ +HR
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHR 156
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+ E L Y+ SDVWS G +L+E+ S GTPY
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 242
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMALFPPLPS 111
+M+ E L Y+ SDVWS G +L+E+V+L +P+ C L+ LP
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY----------CGMTCAELYEKLPQ 256
Query: 112 G 112
G
Sbjct: 257 G 257
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS---- 173
K HHPNI+ L A R L+L +E A G+L + + R + A + S
Sbjct: 81 KLGHHPNIINLLGACEHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 174 --------YFRQIAAALQYVHSRRILHR 193
+ +A + Y+ ++ +HR
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHR 166
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +PE ++ K++ SDVWS G V++EV S+ PY+
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 216
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 22/30 (73%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE ++ K++ SDVWS G V++E+++
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSFP 67
+GT YY++PE L Y DVWS G +LY + S F G Y +++++ KY+F
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 253
Query: 68 SDVW 71
W
Sbjct: 254 LPQW 257
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L HPNI++L F + +LV E+ G+L +I+ R +E R
Sbjct: 87 KQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKR-----FSEVDAARIIR 139
Query: 177 QIAAALQYVHSRRILHR 193
Q+ + + Y+H +I+HR
Sbjct: 140 QVLSGITYMHKNKIVHR 156
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
+GT YY++PE L Y DVWS G +LY +++ PF
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 233
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
F+ T +Y +PE L KYS DVWS GC+L E+ L+ P F
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPIF 223
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 4 KTSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ S + F+ T +Y +PE L KYS DVWS GC+L E+ FL P +
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL--FLRRPIF 223
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY-YMSPERLKEL 62
+ +PE L K+S SDVW+ G +L+E+ ++ +PY + P ++ EL
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL 222
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ L + Q
Sbjct: 62 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA--TQ 117
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 118 ISSAMEYLEKKNFIHR 133
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 189 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 229
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 142
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 143 RGLKYIHSANVLHRDLKPSNLLLNTTC 169
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 134
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTC 161
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 138
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTC 165
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 134
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTC 161
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 136
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTC 163
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 192 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 186 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 139
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 140 RGLKYIHSANVLHRDLKPSNLLLNTTC 166
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 193 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 187 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 227
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 140
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 141 RGLKYIHSANVLHRDLKPSNLLLNTTC 167
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 184 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 178 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 218
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 131
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 132 RGLKYIHSANVLHRDLKPSNLLLNTTC 158
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 138
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTC 165
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 136
Query: 180 AALQYVHSRRILHR 193
L+Y+HS +LHR
Sbjct: 137 RGLKYIHSANVLHR 150
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 154
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTC 181
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L P IV L A R G + + +EL + G L +I +Q C L E Y Q
Sbjct: 107 LSSPRIVPLYGAV--REGPWVNIFMELLEGGSLGQLI---KQMGC-LPEDRALYYLGQAL 160
Query: 180 AALQYVHSRRILH 192
L+Y+H+RRILH
Sbjct: 161 EGLEYLHTRRILH 173
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L P IV L A R G + + +EL + G L +I +Q C L E Y Q
Sbjct: 121 LSSPRIVPLYGAV--REGPWVNIFMELLEGGSLGQLI---KQMGC-LPEDRALYYLGQAL 174
Query: 180 AALQYVHSRRILH 192
L+Y+H+RRILH
Sbjct: 175 EGLEYLHTRRILH 187
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 136
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTC 163
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 138
Query: 180 AALQYVHSRRILHR 193
L+Y+HS +LHR
Sbjct: 139 RGLKYIHSANVLHR 152
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 163 KC-HLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
KC HL+ + + QI L+Y+HS +LHR + + L + C
Sbjct: 121 KCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC 165
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L P IV L A R G + + +EL + G L ++ E + C L E Y Q
Sbjct: 142 LTSPRIVPLYGAV--REGPWVNIFMELLEGGSLGQLVKE---QGC-LPEDRALYYLGQAL 195
Query: 180 AALQYVHSRRILH 192
L+Y+HSRRILH
Sbjct: 196 EGLEYLHSRRILH 208
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 118 KTLHHPNIVELRSAFASRSGQEL---FLVLELADQGDLALVIAECRQKKCHLAECLVWSY 174
K L+HPNIV+L + + L FL ++L D D + + + L+ SY
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG--------IPLPLIKSY 111
Query: 175 FRQIAAALQYVHSRRILHR 193
Q+ L + HS R+LHR
Sbjct: 112 LFQLLQGLAFCHSHRVLHR 130
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 134
Query: 180 AALQYVHSRRILHR 193
L+Y+HS +LHR
Sbjct: 135 RGLKYIHSANVLHR 148
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 46 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 132
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 133 RGLKYIHSANVLHRDLKPSNLLLNTTC 159
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 162 KKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
K HL+ + + QI L+Y+HS +LHR
Sbjct: 137 KTQHLSNDHICYFLYQILRGLKYIHSANVLHR 168
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 132
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 133 RGLKYIHSANVLHRDLKPSNLLLNTTC 159
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 138
Query: 180 AALQYVHSRRILHR 193
L+Y+HS +LHR
Sbjct: 139 RGLKYIHSANVLHR 152
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 46 SFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
+F GT Y +PE L Y P ++WSLG LY +V ++PF L + +E A
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE-------LEETVEAA 240
Query: 105 LFPP 108
+ PP
Sbjct: 241 IHPP 244
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 120 LHHPNIVELRSAFASRSGQELF-LVLELADQG-DLALVIAECRQKKCHLAECLVWSYFRQ 177
+ H NI+++ F + Q F LV+E G DL I + L E L FRQ
Sbjct: 86 VEHANIIKVLDIFEN---QGFFQLVMEKHGSGLDLFAFI----DRHPRLDEPLASYIFRQ 138
Query: 178 IAAALQYVHSRRILHRGERETFLSVLGD 205
+ +A+ Y+ + I+HR ++ + + D
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVIAED 166
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 118 KTLHHPNIVELRSAFASRSGQEL---FLVLELADQGDLALVIAECRQKKCHLAECLVWSY 174
K L+HPNIV+L + + L FL ++L D D + + + L+ SY
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG--------IPLPLIKSY 110
Query: 175 FRQIAAALQYVHSRRILHR 193
Q+ L + HS R+LHR
Sbjct: 111 LFQLLQGLAFCHSHRVLHR 129
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE + K Y+ D+WS+GC+L EM++ + F KH
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE + K Y+ D+WS+GC+L E+
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 134
Query: 180 AALQYVHSRRILHR 193
L+Y+HS +LHR
Sbjct: 135 RGLKYIHSANVLHR 148
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMV 81
+GT YMSPE++ YS D++SLG +L+E++
Sbjct: 237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 12 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+GT YMSPE++ YS D++SLG +L+E+
Sbjct: 237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 47 FLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKH 91
++ T +Y +PE + K Y+ D+WS+GC+L EM++ + F KH
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEV 44
T + ++ T +Y +PE + K Y+ D+WS+GC+L E+
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 134
Query: 180 AALQYVHSRRILHR 193
L+Y+HS +LHR
Sbjct: 135 RGLKYIHSANVLHR 148
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +PE ++ K++ SDVWS G V++EV S+ PY+
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 250
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMALFPPLP 110
+ +PE ++ K++ SDVWS G V++E+++ + P++ +S + K IE P P
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD--MSNQDVIKAIEEGYRLPAP 270
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +PE ++ K++ SDVWS G V++EV S+ PY+
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 242
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 22/30 (73%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE ++ K++ SDVWS G V++E+++
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L P IV L A R G + + +EL + G L ++ E + C L E Y Q
Sbjct: 123 LTSPRIVPLYGAV--REGPWVNIFMELLEGGSLGQLVKE---QGC-LPEDRALYYLGQAL 176
Query: 180 AALQYVHSRRILH 192
L+Y+HSRRILH
Sbjct: 177 EGLEYLHSRRILH 189
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L P IV L A R G + + +EL + G L +I +Q C L E Y Q
Sbjct: 123 LSSPRIVPLYGAV--REGPWVNIFMELLEGGSLGQLI---KQMGC-LPEDRALYYLGQAL 176
Query: 180 AALQYVHSRRILH 192
L+Y+H+RRILH
Sbjct: 177 EGLEYLHTRRILH 189
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 127
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 128 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
Query: 101 I 101
+
Sbjct: 234 L 234
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 229
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L H NI+EL+S L L+ E A+ + + K ++ ++ S+ Q
Sbjct: 88 KELQHRNIIELKSVI--HHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQ 140
Query: 178 IAAALQYVHSRRILHR 193
+ + + HSRR LHR
Sbjct: 141 LINGVNFCHSRRCLHR 156
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 50 TPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
T +Y PE L YS D+WS+ C+ EM+ +++P F ++ L K E+ P
Sbjct: 200 TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML-MKTPLFPGDSEIDQLFKIFEVLGLP 257
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 417
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ + L + Q
Sbjct: 268 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 323
Query: 178 IAAALQYVHSRRILHRG 194
I++A++Y+ + +HR
Sbjct: 324 ISSAMEYLEKKNFIHRN 340
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 128
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 129 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 159
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 175 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 234
Query: 101 I 101
+
Sbjct: 235 L 235
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 230
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 136
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 137 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 167
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
Query: 101 I 101
+
Sbjct: 243 L 243
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 238
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 74 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 129
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 130 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 160
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 235
Query: 101 I 101
+
Sbjct: 236 L 236
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 154
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 155 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 185
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 201 EMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 260
Query: 101 I 101
+
Sbjct: 261 L 261
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 256
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 128
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 129 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 159
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 175 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 234
Query: 101 I 101
+
Sbjct: 235 L 235
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 230
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ + T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 12 LGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
+ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ L + Q
Sbjct: 271 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA--TQ 326
Query: 178 IAAALQYVHSRRILHRG 194
I++A++Y+ + +HR
Sbjct: 327 ISSAMEYLEKKNFIHRN 343
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 143
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 144 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
Query: 101 I 101
+
Sbjct: 250 L 250
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 245
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ + L + Q
Sbjct: 66 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 121
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 122 ISSAMEYLEKKNFIHR 137
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 459
Score = 33.9 bits (76), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ + L + Q
Sbjct: 310 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 365
Query: 178 IAAALQYVHSRRILHRG 194
I++A++Y+ + +HR
Sbjct: 366 ISSAMEYLEKKNFIHRN 382
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 142
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 143 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 173
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 189 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 248
Query: 101 I 101
+
Sbjct: 249 L 249
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 244
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E DL + L L+ SY Q
Sbjct: 60 KELNHPNIVKLLDVIHTEN--KLYLVFEFLSM-DLKKFMDASALTGIPLP--LIKSYLFQ 114
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 115 LLQGLAFCHSHRVLHR 130
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L ++++E G+L + EC +++ L + Q
Sbjct: 64 KEIKHPNLVQLLGVCTREP--PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMA--TQ 119
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 120 ISSAMEYLEKKNFIHR 135
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ + L + Q
Sbjct: 64 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 119
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 120 ISSAMEYLEKKNFIHR 135
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ + L + Q
Sbjct: 66 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 121
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 122 ISSAMEYLEKKNFIHR 137
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L ++++E G+L + EC +++ L + Q
Sbjct: 64 KEIKHPNLVQLLGVCTREP--PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMA--TQ 119
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 120 ISSAMEYLEKKNFIHR 135
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ L + Q
Sbjct: 64 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA--TQ 119
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 120 ISSAMEYLEKKNFIHR 135
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 136
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 137 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 167
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
Query: 101 I 101
+
Sbjct: 243 L 243
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 238
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 143
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 144 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
Query: 101 I 101
+
Sbjct: 250 L 250
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 245
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 75 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 130
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 131 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 161
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 177 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 236
Query: 101 I 101
+
Sbjct: 237 L 237
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 180 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 232
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ + L + Q
Sbjct: 69 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 124
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 125 ISSAMEYLEKKNFIHR 140
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ + L + Q
Sbjct: 64 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 119
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 120 ISSAMEYLEKKNFIHR 135
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 143
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 144 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
Query: 101 I 101
+
Sbjct: 250 L 250
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 245
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ + L + Q
Sbjct: 77 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 132
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 133 ISSAMEYLEKKNFIHR 148
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 133
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 134 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
Query: 101 I 101
+
Sbjct: 240 L 240
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 235
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ + L + Q
Sbjct: 68 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 123
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 124 ISSAMEYLEKKNFIHR 139
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ + L + Q
Sbjct: 69 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 124
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 125 ISSAMEYLEKKNFIHR 140
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 127
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 128 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
Query: 101 I 101
+
Sbjct: 234 L 234
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 229
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ L + Q
Sbjct: 69 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA--TQ 124
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 125 ISSAMEYLEKKNFIHR 140
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L+HPNIV+L + + +L+LV E DL + L L+ SY Q
Sbjct: 58 KELNHPNIVKLLDVIHTEN--KLYLVFEFLSM-DLKKFMDASALTGIPLP--LIKSYLFQ 112
Query: 178 IAAALQYVHSRRILHR 193
+ L + HS R+LHR
Sbjct: 113 LLQGLAFCHSHRVLHR 128
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
T +Y +PE L KY S D+WSLGC+ EMV ++ F
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERLKELKY-SFPSDVWSLGCVLYEV 44
T +Y +PE L KY S D+WSLGC+ E+
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 154
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 155 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 185
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 201 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 260
Query: 101 I 101
+
Sbjct: 261 L 261
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 256
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 133
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 134 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
Query: 101 I 101
+
Sbjct: 240 L 240
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 235
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 138
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 139 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
Query: 101 I 101
+
Sbjct: 245 L 245
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 240
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ + L + Q
Sbjct: 65 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 120
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 121 ISSAMEYLEKKNFIHR 136
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ + L + Q
Sbjct: 69 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 124
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 125 ISSAMEYLEKKNFIHR 140
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ L + Q
Sbjct: 64 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA--TQ 119
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 120 ISSAMEYLEKKNFIHR 135
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
S G +M+PE ++ +S SDVWS G +L+E++ + PF
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
S G +M+PE ++ +S SDVWS G +L+E+
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWEL 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L ++++E G+L + EC +++ + L + Q
Sbjct: 65 KEIKHPNLVQLLGVCTREP--PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 120
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 121 ISSAMEYLEKKNFIHR 136
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 138
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 139 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
Query: 101 I 101
+
Sbjct: 245 L 245
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 240
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 137
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 138 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
Query: 101 I 101
+
Sbjct: 244 L 244
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 239
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 138
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 139 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
Query: 101 I 101
+
Sbjct: 245 L 245
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 240
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L +++ E G+L + EC +++ + L + Q
Sbjct: 66 KEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 121
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 122 ISSAMEYLEKKNFIHR 137
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
K L H +I +L + ++F+VLE G+L +I++ R L+E FR
Sbjct: 63 KNLRHQHICQLYHVL--ETANKIFMVLEYCPGGELFDYIISQDR-----LSEEETRVVFR 115
Query: 177 QIAAALQYVHSRRILHR 193
QI +A+ YVHS+ HR
Sbjct: 116 QIVSAVAYVHSQGYAHR 132
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 42 YEVDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPFFSKHI 92
Y + + G+ Y +PE ++ Y +DVWS+G +LY ++ PF ++
Sbjct: 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV 215
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L K+S SDVW+ G +L+E+ ++ +PY
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L ++++E G+L + EC +++ + L + Q
Sbjct: 69 KEIKHPNLVQLLGVCTREP--PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMA--TQ 124
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 125 ISSAMEYLEKKNFIHR 140
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L K+S SDVW+ G +L+E+ SP+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 138
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 139 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
Query: 101 I 101
+
Sbjct: 245 L 245
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 240
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 127
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 128 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ F+ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 174 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
Query: 101 I 101
+
Sbjct: 234 L 234
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
F+ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 177 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 229
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K + H N++ L F +RS +E ++LV L DL ++ +C++ + L++
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV-KCQKLTDDHVQFLIY- 134
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
QI L+Y+HS I+HR + + L+V DC
Sbjct: 135 ---QILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
Query: 101 I 101
+
Sbjct: 240 L 240
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 235
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
HP+I+ L ++ S S +FLV +L +G+L + E K L+E S R + A
Sbjct: 159 HPHIITLIDSYESSSF--MFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEA 212
Query: 182 LQYVHSRRILHR 193
+ ++H+ I+HR
Sbjct: 213 VSFLHANNIVHR 224
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 49 GTPYYMSPERLK-ELKYSFPS-----DVWSLGCVLYEMVALQSPFFSK 90
GTP Y++PE LK + + P D+W+ G +L+ ++A PF+ +
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR 308
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 31/107 (28%)
Query: 13 GTPYYMSPERLK-ELKYSFPS-----DVWSLGCVLYEVDSFLGTPYYMSPER------LK 60
GTP Y++PE LK + + P D+W+ G +L+ + G+P + + +
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL--LAGSPPFWHRRQILMLRMIM 318
Query: 61 ELKYSFPSDVW-SLGCVLYEMV----------------ALQSPFFSK 90
E +Y F S W + +++ ALQ PFF +
Sbjct: 319 EGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ F+ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
F+ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+M PE + +Y+ SDVW+ G VL+E+ S+ PYY
Sbjct: 242 WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 86 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 141
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 142 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 172
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 188 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 247
Query: 101 I 101
+
Sbjct: 248 L 248
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 191 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 243
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
L N V+ +A +S LF+ +E + G L +I + + W FRQI
Sbjct: 72 LERRNFVKPMTAVKKKS--TLFIQMEYCENGTLYDLI---HSENLNQQRDEYWRLFRQIL 126
Query: 180 AALQYVHSRRILHR 193
AL Y+HS+ I+HR
Sbjct: 127 EALSYIHSQGIIHR 140
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 151
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 152 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 198 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
Query: 101 I 101
+
Sbjct: 258 L 258
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 253
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 150
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 151 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 181
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 197 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 256
Query: 101 I 101
+
Sbjct: 257 L 257
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 252
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ F+ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
F+ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 131
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 132 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 48 LGTPYYMSPERLKELKYSFP-SDVWSLGCVLYEMVALQSPF 87
+GTP Y++PE L + +Y +DVWS G LY M+ PF
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
Score = 33.9 bits (76), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 2 SVKTSSVDSFLGTPYYMSPERLKELKYSFP-SDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
SV S +GTP Y++PE L + +Y +DVWS G LY + +G + PE K
Sbjct: 167 SVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM--LVGAYPFEDPEEPK 224
Query: 61 ELKYSF 66
+ +
Sbjct: 225 NFRKTI 230
Score = 33.5 bits (75), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
+ + ++L HPNIV + + + L +V+E A G+L I C + +E
Sbjct: 66 IINHRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERI--CNAGR--FSEDEARF 119
Query: 174 YFRQIAAALQYVHSRRILHR 193
+F+Q+ + + Y H+ ++ HR
Sbjct: 120 FFQQLISGVSYCHAMQVCHR 139
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K + H N++ L F +RS +E ++LV L DL ++ +C++ + L++
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV-KCQKLTDDHVQFLIY- 152
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
QI L+Y+HS I+HR + + L+V DC
Sbjct: 153 ---QILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 198 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
Query: 101 I 101
+
Sbjct: 258 L 258
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 253
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L +YS SDVWS G +L+E S +PY
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L +YS SDVWS G +L+E +L SP+
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 45 DSFLGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
D G YM+PER+ + Y +DVWSLG L E+ Q P+ + L K
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK 241
Query: 100 RIEMALFPPLPSG 112
++ PPL G
Sbjct: 242 VLQEE--PPLLPG 252
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 3 VKTSSVDSFLGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEV 44
V + D G YM+PER+ + Y +DVWSLG L E+
Sbjct: 176 VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K + H N++ L F +RS +E ++LV L DL ++ +C++ + L++
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV-KCQKLTDDHVQFLIY- 152
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
QI L+Y+HS I+HR + + L+V DC
Sbjct: 153 ---QILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ + T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 198 EMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
Query: 101 I 101
+
Sbjct: 258 L 258
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 12 LGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
+ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 253
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPL 109
T YY +PE + + Y D+WS+GC++ EMV F ++ K IE L P
Sbjct: 188 TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC-HKILFPGRDYIDQWNKVIE-QLGTPC 245
Query: 110 PSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
P + T+ VE R +A S ++LF
Sbjct: 246 PEFMKKLQPTVR--TYVENRPKYAGYSFEKLF 275
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D ++ E ++ S
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM--------S 129
Query: 174 YF-RQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Y Q+ ++++HS I+HR + + + V DC
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 164
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
T YY +PE + + Y D+WS+GC++ E+
Sbjct: 188 TRYYRAPEVILGMGYKENVDLWSVGCIMGEM 218
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L +YS SDVWS G +L+E S +PY
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L +YS SDVWS G +L+E +L SP+
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K + H N++ L F +RS +E ++LV L DL ++ +C++ + L++
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV-KCQKLTDDHVQFLIY- 151
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
QI L+Y+HS I+HR + + L+V DC
Sbjct: 152 ---QILRGLKYIHSADIIHRDLKPSNLAVNEDC 181
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 197 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 256
Query: 101 I 101
+
Sbjct: 257 L 257
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 252
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+M PE + K++ SDVWS G +L+E+ ++ P++
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 237
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFS 89
+M PE + K++ SDVWS G +L+E+ + P+F
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQ 238
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 14/87 (16%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLA------------LVIAECRQKKCHL 166
L H +IV+ G L +V E GDL LV + RQ K L
Sbjct: 73 NLQHEHIVKFYGVCGD--GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 167 AECLVWSYFRQIAAALQYVHSRRILHR 193
+ QIA+ + Y+ S+ +HR
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHFVHR 157
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 26/106 (24%)
Query: 13 GTPYYMSPER----LKELKYSFPSDVWSLGCVLYEV-------DSFLGTPYYMSPERLKE 61
G Y +PER L + YS SD+WSLG E+ DS+ GTP+ + ++E
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSW-GTPFQQLKQVVEE 256
Query: 62 LKYSFPSDVWSLGCVLYEMVAL--------------QSPFFSKHIS 93
P+D +S V + L Q PFF+ H S
Sbjct: 257 PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLHES 302
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 40 VLYEVDSFLGTPYYMSPER----LKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN 95
V ++D+ G Y +PER L + YS SD+WSLG E+ L+ P+ S
Sbjct: 191 VAKDIDA--GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQ 248
Query: 96 GLCKRIEMALFPPLPSGVLYSDK 118
L + +E PS L +DK
Sbjct: 249 QLKQVVEE------PSPQLPADK 265
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K + H N++ L F +RS +E ++LV L DL ++ + H+ + L++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHV-QFLIY- 132
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
QI L+Y+HS I+HR + + L+V DC
Sbjct: 133 ---QILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 4 KTSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ S + ++ T +Y +PE L KYS DVWS GC+L E+ FL P +
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL--FLRRPIF 223
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 47 FLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
++ T +Y +PE L KYS DVWS GC+L E+ L+ P F
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPIF 223
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 137
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 138 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
Query: 101 I 101
+
Sbjct: 244 L 244
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 239
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 45 DSFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVA 82
D + T +Y SPE L + +Y P DVW++GCV E+++
Sbjct: 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS 198
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 9 DSFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
D + T +Y SPE L + +Y P DVW++GCV E+ S G P + + +L
Sbjct: 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS--GVPLWPGKSDVDQL 212
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K L HPN+V L F R + L LV E D L + R HL + + W Q
Sbjct: 57 KQLKHPNLVNLLEVF--RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW----Q 110
Query: 178 IAAALQYVHSRRILHR 193
A+ + H +HR
Sbjct: 111 TLQAVNFCHKHNCIHR 126
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +PE + K++ SDVWS G V++EV S+ PY+
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 221
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMA--LFPPL 109
+ +PE + K++ SDVWS G V++E+++ + P++ +S + K IE L PP+
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD--MSNQDVIKAIEEGYRLPPPM 242
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPS 111
+Y +PE + L +S P DVWS+GC+L E L F H S L + + PLP
Sbjct: 199 HYRAPEVILALGWSQPCDVWSIGCILIEYY-LGFTVFPTHDSKEHLA--MMERILGPLPK 255
Query: 112 GVLYSD---KTLHHPNI 125
++ K HH +
Sbjct: 256 HMIQKTRKRKYFHHDRL 272
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYE 43
+Y +PE + L +S P DVWS+GC+L E
Sbjct: 199 HYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K + H N++ L F +RS +E ++LV L DL ++ +C++ + L++
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV-KCQKLTDDHVQFLIY- 138
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
QI L+Y+HS I+HR + + L+V DC
Sbjct: 139 ---QILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
Query: 101 I 101
+
Sbjct: 244 L 244
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 239
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +PE + K++ SDVWS G V++EV S+ PY+
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 236
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMA--LFPPL 109
+ +PE + K++ SDVWS G V++E+++ + P++ +S + K IE L PP+
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD--MSNQDVIKAIEEGYRLPPPM 257
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +PE + K++ SDVWS G V++EV S+ PY+
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 215
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMA--LFPPL 109
+ +PE + K++ SDVWS G V++E+++ + P++ +S + K IE L PP+
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD--MSNQDVIKAIEEGYRLPPPM 236
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 48 LGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
+ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + + T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 201 TGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 122 HPNIVELRSAFAS---RSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
H N++ +R + + +++++V +L + L+ K L+ + + QI
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLL------KSQQLSNDHICYFLYQI 153
Query: 179 AAALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLINTTC 181
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 43 EVDSFLGTPYYMSPER-LKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI 101
E+ + T +Y +PE L ++Y+ D+WS+GC++ EM+ ++ F L+ L + +
Sbjct: 181 EMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT-LFKGSDHLDQLKEIM 239
Query: 102 EMALFPP 108
++ PP
Sbjct: 240 KVTGTPP 246
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 14 TPYYMSPER-LKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
T +Y +PE L ++Y+ D+WS+GC++ E+ G + + L +LK
Sbjct: 188 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEM--ITGKTLFKGSDHLDQLK 236
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F + +LV+ D G L K L E +
Sbjct: 79 KHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKL--------MKHEKLGEDRI 130
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
Q+ L+Y+H+ I+HR + L+V DC
Sbjct: 131 QFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC 165
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 48 LGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
+ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + + T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 185 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 138
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTC 165
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 48 LGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
+ T +Y +PE L Y+ D+WS+GC+L EM++ + F KH
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 5 TSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEV 44
T + + T +Y +PE L Y+ D+WS+GC+L E+
Sbjct: 186 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELAD--QGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
H NI+ + + + +++ V + D + DL ++ K HL+ + + QI
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQIL 139
Query: 180 AALQYVHSRRILHRGERETFLSVLGDC 206
L+Y+HS +LHR + + L + C
Sbjct: 140 RGLKYIHSANVLHRDLKPSNLLLNTTC 166
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ L+H NIV+ + G + L++E G L + + + K +L + L Y Q
Sbjct: 78 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQL--KYAVQ 134
Query: 178 IAAALQYVHSRRILHR 193
I + Y+ SR+ +HR
Sbjct: 135 ICKGMDYLGSRQYVHR 150
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
++ +PE L + K+ SDVWS G L+E++
Sbjct: 194 FWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEV 44
++ +PE L + K+ SDVWS G L+E+
Sbjct: 194 FWYAPECLMQSKFYIASDVWSFGVTLHEL 222
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ L+H NIV+ + G + L++E G L + + + K +L + L Y Q
Sbjct: 66 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQL--KYAVQ 122
Query: 178 IAAALQYVHSRRILHR 193
I + Y+ SR+ +HR
Sbjct: 123 ICKGMDYLGSRQYVHR 138
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
++ +PE L + K+ SDVWS G L+E++
Sbjct: 182 FWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEV 44
++ +PE L + K+ SDVWS G L+E+
Sbjct: 182 FWYAPECLMQSKFYIASDVWSFGVTLHEL 210
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +PE + K++ SD WS G V++EV SF PY+
Sbjct: 189 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYW 225
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 22 RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMV 81
R E S P++ SLG + + +PE + K++ SD WS G V++E++
Sbjct: 166 RFLEENSSDPTETSSLGGKI--------PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
Query: 82 AL-QSPFFSKHISLNGLCKRIEMAL-FPPLPS 111
+ + P++ +S + IE PP P
Sbjct: 218 SFGERPYWD--MSNQDVINAIEQDYRLPPPPD 247
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +PE + K++ SD WS G V++EV SF PY+
Sbjct: 187 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYW 223
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMAL-FPPLP 110
+ +PE + K++ SD WS G V++E+++ + P++ +S + IE PP P
Sbjct: 187 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD--MSNQDVINAIEQDYRLPPPP 244
Query: 111 S 111
Sbjct: 245 D 245
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 53 YMSPERLK----ELKYSFPSDVWSLGCVLYEMVALQSPF 87
YM+PER+ Y SDVWSLG LYE+ + P+
Sbjct: 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 17 YMSPERLK----ELKYSFPSDVWSLGCVLYEV 44
YM+PER+ Y SDVWSLG LYE+
Sbjct: 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYEL 222
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ +PE + K++ SDVWS G V++EV S+ PY+
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYW 229
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMALFPPLP 110
+ +PE + K++ SDVWS G V++E+V+ + P++ ++ + K +E P P
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYW--EMTNQDVIKAVEEGYRLPSP 249
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C + + L+
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCAKLTDDHVQFLI 127
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V DC
Sbjct: 128 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
Query: 101 I 101
+
Sbjct: 234 L 234
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 229
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S PY
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE + + Y+ SDVWS G +L+E+ +L
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFSL 262
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S PY
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE + + Y+ SDVWS G +L+E+ +L
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFSL 262
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S PY
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE + + Y+ SDVWS G +L+E+ +L
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFSL 250
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 46 SFLGTPYYMSPE--RLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
F GT YM+P+ R + + D WSLG ++YE++ SPF
Sbjct: 219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 4 KTSSVDSFLGTPYYMSPE--RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKE 61
+T F GT YM+P+ R + + D WSLG ++YE+ + +P+ + E+ +
Sbjct: 213 ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG-ASPFTVDGEKNSQ 271
Query: 62 LKYS---------FPSDVWSLGCVLYEMVALQSP 86
+ S +P ++ +L L + + ++ P
Sbjct: 272 AEISRRILKSEPPYPQEMSALAKDLIQRLLMKDP 305
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S PY
Sbjct: 226 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 261
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE + + Y+ SDVWS G +L+E+ +L
Sbjct: 226 WMAPESIFDCVYTVQSDVWSYGILLWEIFSL 256
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER 58
+M+ E + K++ SDVWS G ++E+ +F G PY P R
Sbjct: 208 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR 249
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
++ HP++V L S + Q LV +L G L + E K ++ L+ ++ QI
Sbjct: 96 SMDHPHLVRLLGVCLSPTIQ---LVTQLMPHGCLLEYVHE---HKDNIGSQLLLNWCVQI 149
Query: 179 AAALQYVHSRRILHR 193
A + Y+ RR++HR
Sbjct: 150 AKGMMYLEERRLVHR 164
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER 58
+M+ E + K++ SDVWS G ++E+ +F G PY P R
Sbjct: 185 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR 226
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
++ HP++V L S + Q LV +L G L + E K ++ L+ ++ QI
Sbjct: 73 SMDHPHLVRLLGVCLSPTIQ---LVTQLMPHGCLLEYVHE---HKDNIGSQLLLNWCVQI 126
Query: 179 AAALQYVHSRRILHR 193
A + Y+ RR++HR
Sbjct: 127 AKGMMYLEERRLVHR 141
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S PY
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE + + Y+ SDVWS G +L+E+ +L
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFSL 258
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 16/91 (17%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER----LKELKYSFPSDVWS 72
+ +PE + +S SDVWS G V++EV ++ PY+ R E Y P+
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA---P 276
Query: 73 LGC--VLYEMV-------ALQSPFFSKHISL 94
+GC L++++ Q P FS+ +S+
Sbjct: 277 MGCPHALHQLMLDCWHKDRAQRPRFSQIVSV 307
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMALFPPLPS 111
+ +PE + +S SDVWS G V++E++A + P++ +++ + +E P P
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW--NMTNRDVISSVEEGYRLPAPM 277
Query: 112 G 112
G
Sbjct: 278 G 278
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 16/91 (17%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER----LKELKYSFPSDVWS 72
+ +PE + +S SDVWS G V++EV ++ PY+ R E Y P+
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA---P 276
Query: 73 LGC--VLYEMV-------ALQSPFFSKHISL 94
+GC L++++ Q P FS+ +S+
Sbjct: 277 MGCPHALHQLMLDCWHKDRAQRPRFSQIVSV 307
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMALFPPLPS 111
+ +PE + +S SDVWS G V++E++A + P++ +++ + +E P P
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW--NMTNRDVISSVEEGYRLPAPM 277
Query: 112 G 112
G
Sbjct: 278 G 278
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 42 YEVDSFLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
Y + ++ T +Y +PE + L +Y+ D+WS+GC+ EM+A + F K+
Sbjct: 217 YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 267
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 11 FLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEV 44
++ T +Y +PE + L +Y+ D+WS+GC+ E+
Sbjct: 222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM 256
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 17/97 (17%)
Query: 118 KTLHHPNIVE----LRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K H NI+ LR + +++VL+L + DL +I H ++ L
Sbjct: 108 KHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQII--------HSSQPLTLE 158
Query: 174 YFR----QIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ R Q+ L+Y+HS +++HR + + L V +C
Sbjct: 159 HVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC 195
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Query: 48 LGTPYYMSPERLKELKYSFPS-------DVWSLGCVLYEMVALQSPFFSK 90
+GTP Y+SPE L+ + + D W+LG YEM Q+PF++
Sbjct: 224 VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 10/50 (20%)
Query: 12 LGTPYYMSPERLKELKYSFPS-------DVWSLGCVLYEVDSFLG-TPYY 53
+GTP Y+SPE L+ + + D W+LG YE+ F G TP+Y
Sbjct: 224 VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEM--FYGQTPFY 271
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 112 GVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLV 171
G L+ K +HPNIV R+ F + + EL++V G +I C + E +
Sbjct: 75 GELHVSKLFNHPNIVPYRATFIADN--ELWVVTSFMAYGSAKDLI--CTHFMDGMNELAI 130
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGD 205
+ + AL Y+H +HR + + + + D
Sbjct: 131 AYILQGVLKALDYIHHMGYVHRSVKASHILISVD 164
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+PE + + Y+ SDVWS G +L+E+ S PY
Sbjct: 234 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
+M+PE + + Y+ SDVWS G +L+E+ +L
Sbjct: 234 WMAPESIFDCVYTVQSDVWSYGILLWEIFSL 264
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 189 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 248
Query: 101 I 101
+
Sbjct: 249 L 249
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 142
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGD 205
+ QI L+Y+HS I+HR + + L+V D
Sbjct: 143 Y----QILRGLKYIHSADIIHRDLKPSNLAVNED 172
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 244
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
Query: 101 I 101
+
Sbjct: 243 L 243
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 136
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGD 205
+ QI L+Y+HS I+HR + + L+V D
Sbjct: 137 Y----QILRGLKYIHSADIIHRDLKPSNLAVNED 166
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 238
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
Query: 101 I 101
+
Sbjct: 240 L 240
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 133
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V D
Sbjct: 134 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDS 164
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 235
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 112 GVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLV 171
G L+ K +HPNIV R+ F + + EL++V G +I C + E +
Sbjct: 59 GELHVSKLFNHPNIVPYRATFIADN--ELWVVTSFMAYGSAKDLI--CTHFMDGMNELAI 114
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGD 205
+ + AL Y+H +HR + + + + D
Sbjct: 115 AYILQGVLKALDYIHHMGYVHRSVKASHILISVD 148
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
Query: 101 I 101
+
Sbjct: 243 L 243
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 136
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGD 205
+ QI L+Y+HS I+HR + + L+V D
Sbjct: 137 Y----QILRGLKYIHSADIIHRDLKPSNLAVNED 166
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 238
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K + H N++ L F +RS +E ++LV L DL ++ + H+ + L++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHV-QFLIY- 132
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGD 205
QI L+Y+HS I+HR + + L+V D
Sbjct: 133 ---QILRGLKYIHSADIIHRDLKPSNLAVNED 161
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +G PY+M+PE + Y DV+S G VL E++
Sbjct: 181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG 217
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
+ +G PY+M+PE + Y DV+S G VL E+
Sbjct: 181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 43 EVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
+V+ G+ +M+PE R+++ +SF SDV+S G VLYE++ + P+
Sbjct: 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 5 TSSVDSFLGTPYYMSPE--RLKELK-YSFPSDVWSLGCVLYEV 44
+ V+ G+ +M+PE R+++ +SF SDV+S G VLYE+
Sbjct: 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYEL 230
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
Query: 101 I 101
+
Sbjct: 244 L 244
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLEL--ADQGDLALVIAECRQKKCHLAECLV 171
K + H N++ L F +RS +E ++LV L AD + I +C++ + L+
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN----IVKCQKLTDDHVQFLI 137
Query: 172 WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ QI L+Y+HS I+HR + + L+V D
Sbjct: 138 Y----QILRGLKYIHSADIIHRDLKPSNLAVNEDS 168
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 239
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF-FSKHISLNGLCKR 100
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F + HI L R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 101 I 101
+
Sbjct: 238 L 238
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 118 KTLHHPNIVELRSAFA-SRSGQE---LFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K + H N++ L F +RS +E ++LV L DL ++ + H+ + L++
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKSQKLTDDHV-QFLIY- 132
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
QI L+Y+HS I+HR + + L+V D
Sbjct: 133 ---QILRGLKYIHSADIIHRDLKPSNLAVNEDS 162
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LTGRTLFPGTDHIDQLK 233
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 42 YEVDSFLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
Y + ++ T +Y +PE + L +Y+ D+WS+GC+ EM+A + F K+
Sbjct: 218 YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 268
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 11 FLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEV 44
++ T +Y +PE + L +Y+ D+WS+GC+ E+
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM 257
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 17/97 (17%)
Query: 118 KTLHHPNIVE----LRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K H NI+ LR + +++VL+L + DL +I H ++ L
Sbjct: 109 KHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQII--------HSSQPLTLE 159
Query: 174 YFR----QIAAALQYVHSRRILHRGERETFLSVLGDC 206
+ R Q+ L+Y+HS +++HR + + L V +C
Sbjct: 160 HVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC 196
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 172 WSYFRQIAAALQYVHSRRILHRG 194
W FRQI AL Y+HS+ I+HR
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRN 141
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 4 KTSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+ S + + T +Y +PE L KYS DVWS GC+L E+ FL P +
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL--FLRRPIF 223
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 48 LGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
+ T +Y +PE L KYS DVWS GC+L E+ L+ P F
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPIF 223
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 50 TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
T +++PE L+ Y D+WSLG +LY + +PF
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 14 TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLG-TPYYMSPE--------RLKELKY 64
T +++PE L+ Y D+WSLG +LY G TP+ P+ R+ K+
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYT--XLTGYTPFANGPDDTPEEILARIGSGKF 240
Query: 65 SFPSDVWS 72
S W+
Sbjct: 241 SLSGGYWN 248
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 33.9 bits (76), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 172 WSYFRQIAAALQYVHSRRILHR 193
W FRQI AL Y+HS+ I+HR
Sbjct: 119 WRLFRQILEALSYIHSQGIIHR 140
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
+ L HPNI+ L AF +S + LV + + DL ++I + L + +Y
Sbjct: 67 QELSHPNIIGLLDAFGHKS--NISLVFDFMET-DLEVII---KDNSLVLTPSHIKAYMLM 120
Query: 178 IAAALQYVHSRRILHR 193
L+Y+H ILHR
Sbjct: 121 TLQGLEYLHQHWILHR 136
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 50 TPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIE 102
T +Y +PE L + Y D+W++GC+L E++ L+ PF L+ L + E
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAVGCILAELL-LRVPFLPGDSDLDQLTRIFE 227
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 14 TPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPS---- 68
T +Y +PE L + Y D+W++GC+L E+ L P+ L +L F +
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAVGCILAEL--LLRVPFLPGDSDLDQLTRIFETLGTP 232
Query: 69 --DVWSLGCVLYEMVALQS 85
+ W C L + V +S
Sbjct: 233 TEEQWPDMCSLPDYVTFKS 251
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 58 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 112 QLMAGVVYLHGIGITHR 128
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 17/108 (15%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPS 68
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LQGKALFPGSDYIDQLKR---- 240
Query: 69 DVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYS 116
+ E+V SP IS R + PP+P L S
Sbjct: 241 --------IMEVVGTPSPEVLAKISSE--HARTYIQSLPPMPQKDLSS 278
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K L H N++ L F + E++LV L DL ++ +C+ + LV+
Sbjct: 82 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIV-KCQALSDEHVQFLVYQ 139
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
R L+Y+HS I+HR + + ++V D
Sbjct: 140 LLR----GLKYIHSAGIIHRDLKPSNVAVNEDS 168
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 43 EVDSFLGTPYYMSPER-LKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
E+ ++ T +Y +PE L + Y+ D+WS+GC++ EM+ ++ F K
Sbjct: 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 118 KTLHHPNIVELRSAFAS----RSGQELFLVLELADQGDLALVIA-ECRQKKCHLAECLVW 172
K + H N++ L F R+ + +LV+ Q DL ++ E ++K + LV+
Sbjct: 96 KHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMGMEFSEEKI---QYLVY 151
Query: 173 SYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
Q+ L+Y+HS ++HR + L+V DC
Sbjct: 152 ----QMLKGLKYIHSAGVVHRDLKPGNLAVNEDC 181
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 6 SSVDSFLGTPYYMSPER-LKELKYSFPSDVWSLGCVLYEV 44
+ + ++ T +Y +PE L + Y+ D+WS+GC++ E+
Sbjct: 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 235
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 43 EVDSFLGTPYYMSPER-LKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
E+ ++ T +Y +PE L + Y+ D+WS+GC++ EM+ ++ F K
Sbjct: 179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 118 KTLHHPNIVELRSAFAS----RSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K + H N++ L F R+ + +LV+ Q DL ++ +E +
Sbjct: 78 KHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMG------LKFSEEKIQY 130
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
Q+ L+Y+HS ++HR + L+V DC
Sbjct: 131 LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC 163
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 6 SSVDSFLGTPYYMSPER-LKELKYSFPSDVWSLGCVLYEV 44
+ + ++ T +Y +PE L + Y+ D+WS+GC++ E+
Sbjct: 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 217
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 17/108 (15%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPS 68
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LQGKALFPGSDYIDQLKR---- 240
Query: 69 DVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYS 116
+ E+V SP IS R + PP+P L S
Sbjct: 241 --------IMEVVGTPSPEVLAKISSE--HARTYIQSLPPMPQKDLSS 278
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K L H N++ L F + E++LV L DL ++ H+ + LV+
Sbjct: 82 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHV-QFLVYQ 139
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
R L+Y+HS I+HR + + ++V D
Sbjct: 140 LLR----GLKYIHSAGIIHRDLKPSNVAVNEDS 168
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 43 EVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
E+ ++ T +Y +PE L + Y+ D+WS+GC++ E++ ++ F
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 221
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K L H N++ L F + E++LV L DL ++ +C+ + LV+
Sbjct: 74 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIV-KCQALSDEHVQFLVYQ 131
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
R L+Y+HS I+HR + + ++V DC
Sbjct: 132 LLR----GLKYIHSAGIIHRDLKPSNVAVNEDC 160
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 17/108 (15%)
Query: 10 SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPS 68
++ T +Y +PE L + Y+ D+WS+GC++ E+ G + + + +LK
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL--LQGKALFPGSDYIDQLKR---- 232
Query: 69 DVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYS 116
+ E+V SP IS R + PP+P L S
Sbjct: 233 --------IMEVVGTPSPEVLAKISSEH--ARTYIQSLPPMPQKDLSS 270
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 46 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
S++ + YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++
Sbjct: 209 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVL 267
Query: 105 LFP 107
P
Sbjct: 268 GTP 270
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 10 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
S++ + YY +PE + Y+ DVWS GCVL E+ LG P + + +L
Sbjct: 209 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIFPGDSGVDQL 260
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 96 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 153
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 154 LYMYQLFRSLAYIHSFGICHR 174
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 52 YYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLP 110
+Y +PE + + K ++ D+WS GCV+ EM ++ F N L K +E+ P +
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA-LFRGSTFYNQLNKIVEVVGTPKIE 256
Query: 111 SGVLYS 116
V++S
Sbjct: 257 DVVMFS 262
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 120 LHHPNIVELRSAFA---SRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
HHPNI+ LR F + +L+LV EL + DLA VI + ++ ++ + +
Sbjct: 86 FHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHD---QRIVISPQHIQYFMY 141
Query: 177 QIAAALQYVHSRRILHR 193
I L +H ++HR
Sbjct: 142 HILLGLHVLHEAGVVHR 158
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 16 YYMSPERLKELK-YSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKEL 62
+Y +PE + + K ++ D+WS GCV+ E+ + F G+ +Y ++ E+
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 58 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 112 QLMAGVVYLHGIGITHR 128
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 58 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 112 QLMAGVVYLHGIGITHR 128
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 10 SFLGTPY---YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
S +GT + + +PE KYS SDVW+ G +++EV S PY
Sbjct: 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 46 SFLGTPY---YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
S +GT + + +PE KYS SDVW+ G +++E+ +L
Sbjct: 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSL 201
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 46 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
S++ + YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++
Sbjct: 186 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVL 244
Query: 105 LFP 107
P
Sbjct: 245 GTP 247
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 10 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
S++ + YY +PE + Y+ DVWS GCVL E+ LG P + + +L
Sbjct: 186 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIFPGDSGVDQL 237
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 73 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 130
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 131 LYMYQLFRSLAYIHSFGICHR 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 58 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 112 QLMAGVVYLHGIGITHR 128
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 164 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 59 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 113 QLMAGVVYLHGIGITHR 129
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 164 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 52 YYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLP 110
+Y +PE + + K ++ D+WS GCV+ EM ++ F N L K +E+ P +
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA-LFRGSTFYNQLNKIVEVVGTPKIE 256
Query: 111 SGVLYS 116
V++S
Sbjct: 257 DVVMFS 262
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 120 LHHPNIVELRSAFA---SRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
HHPNI+ LR F + +L+LV EL + DLA VI + ++ ++ + +
Sbjct: 86 FHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHD---QRIVISPQHIQYFMY 141
Query: 177 QIAAALQYVHSRRILHR 193
I L +H ++HR
Sbjct: 142 HILLGLHVLHEAGVVHR 158
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 16 YYMSPERLKELK-YSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKEL 62
+Y +PE + + K ++ D+WS GCV+ E+ + F G+ +Y ++ E+
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE L +S SDVW+ G +L+E+ ++ +PY
Sbjct: 197 WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K + HPN+V+L ++V E G+L + EC +++ L + Q
Sbjct: 83 KEIKHPNLVQLLGVCTLEP--PFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMA--TQ 138
Query: 178 IAAALQYVHSRRILHR 193
I++A++Y+ + +HR
Sbjct: 139 ISSAMEYLEKKNFIHR 154
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE L +S SDVW+ G +L+E+ SP+
Sbjct: 197 WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 46 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
S++ + YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++
Sbjct: 219 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVL 277
Query: 105 LFP 107
P
Sbjct: 278 GTP 280
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 10 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
S++ + YY +PE + Y+ DVWS GCVL E+ LG P + + +L
Sbjct: 219 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIFPGDSGVDQL 270
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 106 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 163
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 164 LYMYQLFRSLAYIHSFGICHR 184
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 46 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
S++ + YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++
Sbjct: 215 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVL 273
Query: 105 LFP 107
P
Sbjct: 274 GTP 276
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 10 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
S++ + YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 215 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 257
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 102 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 159
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 160 LYMYQLFRSLAYIHSFGICHR 180
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 58 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 112 QLMAGVVYLHGIGITHR 128
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 46 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
S++ + YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++
Sbjct: 217 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVL 275
Query: 105 LFP 107
P
Sbjct: 276 GTP 278
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 10 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
S++ + YY +PE + Y+ DVWS GCVL E+ LG P + + +L
Sbjct: 217 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIFPGDSGVDQL 268
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 104 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 161
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 162 LYMYQLFRSLAYIHSFGICHR 182
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 46 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
S++ + YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++
Sbjct: 260 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVL 318
Query: 105 LFP 107
P
Sbjct: 319 GTP 321
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 10 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
S++ + YY +PE + Y+ DVWS GCVL E+ LG P + + +L
Sbjct: 260 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIFPGDSGVDQL 311
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 147 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 204
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 205 LYMYQLFRSLAYIHSFGICHR 225
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 33.5 bits (75), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 57 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 110
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 111 QLMAGVVYLHGIGITHR 127
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 58 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 112 QLMAGVVYLHGIGITHR 128
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 58 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 112 QLMAGVVYLHGIGITHR 128
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 30.0 bits (66), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 59 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 113 QLMAGVVYLHGIGITHR 129
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 30.0 bits (66), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 59 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 113 QLMAGVVYLHGIGITHR 129
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 59 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 113 QLMAGVVYLHGIGITHR 129
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 30.0 bits (66), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 59 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 113 QLMAGVVYLHGIGITHR 129
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 58 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 112 QLMAGVVYLHGIGITHR 128
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 58 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 112 QLMAGVVYLHGIGITHR 128
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 59 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 113 QLMAGVVYLHGIGITHR 129
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 58 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 112 QLMAGVVYLHGIGITHR 128
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 58 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 112 QLMAGVVYLHGIGITHR 128
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMV 81
SF+ TPY Y +PE + + Y D+WS+G ++ EM+
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D +L+ VI + L +
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI------QMELDHERMSY 130
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
Q+ ++++HS I+HR + + + V D
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDA 163
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 27/78 (34%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYE-------------VDSF---- 47
SF+ TPY Y +PE + + Y D+WS+G ++ E +D +
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVI 238
Query: 48 --LGTPYYMSPERLKELK 63
LGTP SPE +K+L+
Sbjct: 239 EQLGTP---SPEFMKKLQ 253
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 46 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
S++ + YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++
Sbjct: 194 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVL 252
Query: 105 LFP 107
P
Sbjct: 253 GTP 255
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 10 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
S++ + YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 194 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 236
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 81 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 138
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 139 LYMYQLFRSLAYIHSFGICHR 159
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 203
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 203
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 213
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 164 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 206
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 33.5 bits (75), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 46 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM 103
S++ + YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKV 238
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 10 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
S++ + YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 223
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 68 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 125
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 126 LYMYQLFRSLAYIHSFGICHR 146
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 46 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMV 81
SF+ TPY Y +PE + + Y D+WS+G ++ EM+
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
K ++H NI+ L + F + Q++++V+EL D +L+ VI + L +
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI------QMELDHERMSY 130
Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
Q+ ++++HS I+HR + + + V D
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT 164
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 27/78 (34%)
Query: 10 SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYE-------------VDSF---- 47
SF+ TPY Y +PE + + Y D+WS+G ++ E +D +
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVI 238
Query: 48 --LGTPYYMSPERLKELK 63
LGTP SPE +K+L+
Sbjct: 239 EQLGTP---SPEFMKKLQ 253
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 58 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 112 QLMAGVVYLHGIGITHR 128
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
+ NI+EL F + +LV E G + I QK+ H E R +AAA
Sbjct: 70 NKNILELIEFFEDDT--RFYLVFEKLQGGSILAHI----QKQKHFNEREASRVVRDVAAA 123
Query: 182 LQYVHSRRILHR 193
L ++H++ I HR
Sbjct: 124 LDFLHTKGIAHR 135
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 43 EVDSFLGTPYYMSPERLKELK-----YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNG- 96
E+ + G+ YM+PE ++ Y D+WSLG VLY M++ PF + G
Sbjct: 177 ELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGW 236
Query: 97 ----LCKRIEMALFPPLPSGVL-YSDKTLHH 122
+C+ + LF + G + DK H
Sbjct: 237 DRGEVCRVCQNKLFESIQEGKYEFPDKDWAH 267
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 28/96 (29%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELK-----YSFPSDVWSLGCVLYEVDSFLGTPYYMSP- 56
+ T + + G+ YM+PE ++ Y D+WSLG VLY + S G P ++
Sbjct: 173 ITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLS--GYPPFVGHC 230
Query: 57 --------------------ERLKELKYSFPSDVWS 72
E ++E KY FP W+
Sbjct: 231 GADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWA 266
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 33.5 bits (75), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 46 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
S++ + YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVL 239
Query: 105 LFP 107
P
Sbjct: 240 GTP 242
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 10 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
S++ + YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 223
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 68 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 125
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 126 LYMYQLFRSLAYIHSFGICHR 146
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 33.5 bits (75), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 44 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPF 87
++ GT Y++PE LK ++ + P DVWS G VL M+A + P+
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K L+H N+V+ R G +L LE G+L I + + E +F
Sbjct: 59 NKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 177 QIAAALQYVHSRRILHR 193
Q+ A + Y+H I HR
Sbjct: 113 QLMAGVVYLHGIGITHR 129
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVL 41
++ GT Y++PE LK ++ + P DVWS G VL
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 33.5 bits (75), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 220 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 262
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 213 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 255
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 165 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 207
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 46 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
S++ + YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVL 239
Query: 105 LFP 107
P
Sbjct: 240 GTP 242
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 10 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
S++ + YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 223
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 68 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 125
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 126 LYMYQLFRSLAYIHSFGICHR 146
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 193 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 235
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K HPNI++L+ + + + FLV +L +G+L + E K L+E R
Sbjct: 66 KVSGHPNIIQLKDTYETNTF--FFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRA 119
Query: 178 IAAALQYVHSRRILHR 193
+ + +H I+HR
Sbjct: 120 LLEVICALHKLNIVHR 135
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 49 GTPYYMSPERLK------ELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
GTP Y++PE ++ Y D+WS G ++Y ++A PF+ +
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 219
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 180 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 222
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 194 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 236
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 181 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 223
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 208 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 250
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 181 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 223
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 181 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 223
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 194 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 236
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 193 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 235
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 193 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 235
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 194 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 236
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 194 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 236
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 208 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 250
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 165 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 207
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 193 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 235
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 180 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 222
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
+K HP V L A+ G L+L EL + C L E VW Y R
Sbjct: 111 EKVGQHPCCVRLEQAW--EEGGILYLQTELCGPS----LQQHCEAWGASLPEAQVWGYLR 164
Query: 177 QIAAALQYVHSRRILHRGER--ETFLSVLGDC 206
AL ++HS+ ++H + FL G C
Sbjct: 165 DTLLALAHLHSQGLVHLDVKPANIFLGPRGRC 196
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
G P YM+PE L+ Y +DV+SLG + EV + P+
Sbjct: 218 GDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPH 256
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 166 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 208
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 208 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 250
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 166 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 208
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 200 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 242
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 237
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 188 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 230
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 46 SFLGTPYYMSPERLK-ELKYSFPS-----DVWSLGCVLYEMVALQSPFFSK 90
S GTP Y++PE ++ + + P D+WS G ++Y ++A PF+ +
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 232
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K HPNI++L+ + + + FLV +L +G+L + E K L+E R
Sbjct: 79 KVSGHPNIIQLKDTYETNTF--FFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRA 132
Query: 178 IAAALQYVHSRRILHR 193
+ + +H I+HR
Sbjct: 133 LLEVICALHKLNIVHR 148
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 39/120 (32%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL---------------ALVIA----- 157
K LHHPNI L + Q + LV+EL G L A+ +
Sbjct: 83 KKLHHPNIARLYEVYEDE--QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 158 ---ECRQKKCHLA-------------ECLVWSYFRQIAAALQYVHSRRILHRGER-ETFL 200
EC ++ + + E L+ + RQI +AL Y+H++ I HR + E FL
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFL 200
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 42 YEVDSFLGTPYYMSPERLKELKYSF--PSDVWSLGCVLYEMVALQSPF 87
Y + + GTPY+++PE L S+ D WS G +L+ ++ PF
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 13 GTPYYMSPERLKELKYSF--PSDVWSLGCVLY 42
GTPY+++PE L S+ D WS G +L+
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLH 267
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 46 SFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEMVALQSPF 87
F GT Y PE ++ +Y S VWSLG +LY+MV PF
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSD-VWSLGCVLYEV 44
+K + F GT Y PE ++ +Y S VWSLG +LY++
Sbjct: 166 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 208
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 63 KYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
KY D+WSLG ++Y ++ PF+S H ++++ G+ RI M +
Sbjct: 174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 219
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 12/56 (21%)
Query: 27 KYSFPSDVWSLGCVLYEVDSFLGTPYY-------MSP---ERLKELKYSFPSDVWS 72
KY D+WSLG ++Y + G P + +SP R++ +Y FP+ WS
Sbjct: 174 KYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 227
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 263
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 264 -PDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 263 -PDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 263
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 264 -PDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 260
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 261 -PDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L + +S SDVWS G VLYE+
Sbjct: 182 FWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSF 47
++ +PE L + +S SDVWS G VLYE+ ++
Sbjct: 182 FWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 213
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K LH IV+ R Q L LV+E G L + R + L + Y Q
Sbjct: 66 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQ 122
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ SRR +HR
Sbjct: 123 ICKGMEYLGSRRCVHR 138
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L + +S SDVWS G VLYE+
Sbjct: 195 FWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSF 47
++ +PE L + +S SDVWS G VLYE+ ++
Sbjct: 195 FWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 226
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K LH IV+ R Q L LV+E G L + R + L + Y Q
Sbjct: 79 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQ 135
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ SRR +HR
Sbjct: 136 ICKGMEYLGSRRCVHR 151
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 267
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 268 -PDPLYEVMLKCWHPKAEMRPSFSELVS 294
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
HPNI++L+ + + + FLV +L +G+L + E K L+E R +
Sbjct: 83 HPNIIQLKDTYETNTF--FFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEV 136
Query: 182 LQYVHSRRILHR 193
+ +H I+HR
Sbjct: 137 ICALHKLNIVHR 148
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 49 GTPYYMSPERLK-ELKYSFPS-----DVWSLGCVLYEMVALQSPFFSK 90
GTP Y++PE ++ + + P D+WS G ++Y ++A PF+ +
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 232
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 263 -PDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 261
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 262 -PDPLYEVMLKCWHPKAEMRPSFSELVS 288
Score = 30.0 bits (66), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 93 SLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDL 152
SLN + E++ F L G++ D HPN++ L G L +VL GDL
Sbjct: 64 SLNRITDIGEVSQF--LTEGIIMKD--FSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 118
Query: 153 ALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
I R + + + + Q+A ++Y+ S++ +HR
Sbjct: 119 RNFI---RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L + +S SDVWS G VLYE+
Sbjct: 183 FWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSF 47
++ +PE L + +S SDVWS G VLYE+ ++
Sbjct: 183 FWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 214
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K LH IV+ R Q L LV+E G L + R + L + Y Q
Sbjct: 67 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQ 123
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ SRR +HR
Sbjct: 124 ICKGMEYLGSRRCVHR 139
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
G+ +M+PE + YS DV+S G +L+E++ + PF
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
G+ +M+PE + YS DV+S G +L+EV
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
G+ +M+PE + YS DV+S G +L+E++ + PF
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 13 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
G+ +M+PE + YS DV+S G +L+EV
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 197
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 263 -PDPLYEVMLKCWHPKAEMRPSFSELVS 289
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 93 SLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDL 152
SLN + E++ F L G++ D HPN++ L G L +VL GDL
Sbjct: 65 SLNRITDIGEVSQF--LTEGIIMKD--FSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 119
Query: 153 ALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
I R + + + + Q+A ++Y+ S++ +HR
Sbjct: 120 RNFI---RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 52 YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
++ +PE L + +S SDVWS G VLYE+
Sbjct: 179 FWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 16 YYMSPERLKELKYSFPSDVWSLGCVLYEVDSF 47
++ +PE L + +S SDVWS G VLYE+ ++
Sbjct: 179 FWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 210
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
K LH IV+ R EL LV+E G L + R + L + Y Q
Sbjct: 63 KALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQ 119
Query: 178 IAAALQYVHSRRILHR 193
I ++Y+ SRR +HR
Sbjct: 120 ICKGMEYLGSRRCVHR 135
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 260
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 261 -PDPLYEVMLKCWHPKAEMRPSFSELVS 287
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 93 SLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDL 152
SLN + E++ F L G++ D HPN++ L G L +VL GDL
Sbjct: 63 SLNRITDIGEVSQF--LTEGIIMKD--FSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 117
Query: 153 ALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
I R + + + + Q+A ++Y+ S++ +HR
Sbjct: 118 RNFI---RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 155
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 261
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 262 -PDPLYEVMLKCWHPKAEMRPSFSELVS 288
Score = 30.0 bits (66), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 93 SLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDL 152
SLN + E++ F L G++ D HPN++ L G L +VL GDL
Sbjct: 64 SLNRITDIGEVSQF--LTEGIIMKD--FSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 118
Query: 153 ALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
I R + + + + Q+A ++Y+ S++ +HR
Sbjct: 119 RNFI---RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 259
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 260 -PDPLYEVMLKCWHPKAEMRPSFSELVS 286
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 93 SLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDL 152
SLN + E++ F L G++ D HPN++ L G L +VL GDL
Sbjct: 62 SLNRITDIGEVSQF--LTEGIIMKD--FSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 116
Query: 153 ALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
I R + + + + Q+A ++Y+ S++ +HR
Sbjct: 117 RNFI---RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 154
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 263 -PDPLYEVMLKCWHPKAEMRPSFSELVS 289
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 93 SLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDL 152
SLN + E++ F L G++ D HPN++ L G L +VL GDL
Sbjct: 65 SLNRITDIGEVSQF--LTEGIIMKD--FSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 119
Query: 153 ALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
I R + + + + Q+A ++Y+ S++ +HR
Sbjct: 120 RNFI---RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 254
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 255 -PDPLYEVMLKCWHPKAEMRPSFSELVS 281
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 93 SLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDL 152
SLN + E++ F L G++ D HPN++ L G L +VL GDL
Sbjct: 57 SLNRITDIGEVSQF--LTEGIIMKD--FSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 111
Query: 153 ALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
I R + + + + Q+A ++Y+ S++ +HR
Sbjct: 112 RNFI---RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 149
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 257
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 258 -PDPLYEVMLKCWHPKAEMRPSFSELVS 284
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 93 SLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDL 152
SLN + E++ F L G++ D HPN++ L G L +VL GDL
Sbjct: 60 SLNRITDIGEVSQF--LTEGIIMKD--FSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 114
Query: 153 ALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
I R + + + + Q+A ++Y+ S++ +HR
Sbjct: 115 RNFI---RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 152
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 280
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 281 -PDPLYEVMLKCWHPKAEMRPSFSELVS 307
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 93 SLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDL 152
SLN + E++ F L G++ D HPN++ L G L +VL GDL
Sbjct: 83 SLNRITDIGEVSQF--LTEGIIMKD--FSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 137
Query: 153 ALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
I R + + + + Q+A ++Y+ S++ +HR
Sbjct: 138 RNFI---RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 175
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 321
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 322 -PDPLYEVMLKCWHPKAEMRPSFSELVS 348
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
+M+ E L+ K++ SDVWS G +L+E++ +P
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYE-----------VDSFLGTPYYMSPERLKELKYS 65
+M+ E L+ K++ SDVWS G +L+E V++F T Y + RL + +Y
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 281
Query: 66 FPSDVWSLGCVLYEMVALQSPFFSKHIS 93
P ++ + + A P FS+ +S
Sbjct: 282 -PDPLYEVMLKCWHPKAEMRPSFSELVS 308
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 93 SLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDL 152
SLN + E++ F L G++ D HPN++ L G L +VL GDL
Sbjct: 84 SLNRITDIGEVSQF--LTEGIIMKD--FSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 138
Query: 153 ALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
I R + + + + Q+A ++Y+ S++ +HR
Sbjct: 139 RNFI---RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 176
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 52 YYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++ P
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVLGTP 276
Score = 30.8 bits (68), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 16 YYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 257
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 102 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 159
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 160 LYMYQLFRSLAYIHSFGICHR 180
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + K+S SDVWS G +++E S+ PY
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 211
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE + K+S SDVWS G +++E + Q P+
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 211
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + K+S SDVWS G +++E S+ PY
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 209
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE + K+S SDVWS G +++E + Q P+
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + K+S SDVWS G +++E S+ PY
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE + K+S SDVWS G +++E + Q P+
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 2 SVKTSSVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
S+ T + D+ + T +Y P+ L YS D+W +GC+ YE+ + G P + +
Sbjct: 151 SIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT--GRPLFPGSTVEE 208
Query: 61 ELKYSF 66
+L + F
Sbjct: 209 QLHFIF 214
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 45 DSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
D+ + T +Y P+ L YS D+W +GC+ YEM A P F
Sbjct: 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM-ATGRPLF 201
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK-KCHLAECLVWSYFR 176
K L H NIV L + + L LV E D+ DL + +C H + ++ R
Sbjct: 55 KDLKHANIVTLHDIIHTE--KSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLR 111
Query: 177 QIAAALQYVHSRRILHR 193
+A Y H +++LHR
Sbjct: 112 GLA----YCHRQKVLHR 124
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
H NI+ L +F S +EL ++ E D + L E + SY Q+ A
Sbjct: 60 HRNILHLHESFESM--EELVMIFEFISGLD---IFERINTSAFELNEREIVSYVHQVCEA 114
Query: 182 LQYVHSRRILH 192
LQ++HS I H
Sbjct: 115 LQFLHSHNIGH 125
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 51 PYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
P Y +PE + S +D+WSLG ++Y +++ +PF ++
Sbjct: 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE 206
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 15 PYYMSPERLKELKYSFPSDVWSLGCVLY----EVDSFLGTPYYMSPERLKELKYSFPSDV 70
P Y +PE + S +D+WSLG ++Y ++ FL E + +Y+F +
Sbjct: 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEA 226
Query: 71 W 71
+
Sbjct: 227 F 227
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 68 SDVWSLGCVLYEMVALQSPF 87
+DVWSLGCVLY M+ + P+
Sbjct: 227 TDVWSLGCVLYAMMFGEGPY 246
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 20/92 (21%)
Query: 32 SDVWSLGCVLYEVDSFLGTPYYMSPERLKEL------KYSFP------SDVWSLGCVLYE 79
+DVWSLGCVLY + F PY M ++ + + S P S +W L L
Sbjct: 227 TDVWSLGCVLYAM-MFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQL---LNS 282
Query: 80 MVALQSPFFSKHISLNGLCKRIEMALFPPLPS 111
M+ + P HI L L ++E AL PP P
Sbjct: 283 MMTV-DPHQRPHIPL--LLSQLE-ALQPPAPG 310
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 118 KTLHHPNIVELRSAFASRSG--QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
+ +HPNI+ L + G E +L+L +G L I + K L E +
Sbjct: 81 RLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL 140
Query: 176 RQIAAALQYVHSRRILHRGERETFLSVLGD 205
I L+ +H++ HR + T + +LGD
Sbjct: 141 LGICRGLEAIHAKGYAHRDLKPTNI-LLGD 169
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNG 96
+ +PE LK +S SD W G L+EM Q P+ I LNG
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW----IGLNG 224
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE LK +S SD W G L+E+ ++ P+
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 219
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
+L H N++ L + + +V ELA G L + R+ + H + Y Q+
Sbjct: 71 SLDHRNLIRLYGVVLT---PPMKMVTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQV 124
Query: 179 AAALQYVHSRRILHR 193
A + Y+ S+R +HR
Sbjct: 125 AEGMGYLESKRFIHR 139
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + K+S SDVWS G +++E S+ PY
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE + K+S SDVWS G +++E + Q P+
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNG 96
+ +PE LK +S SD W G L+EM Q P+ I LNG
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW----IGLNG 224
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE LK +S SD W G L+E+ ++ P+
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 219
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
+L H N++ L + + +V ELA G L + R+ + H + Y Q+
Sbjct: 71 SLDHRNLIRLYGVVLT---PPMKMVTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQV 124
Query: 179 AAALQYVHSRRILHR 193
A + Y+ S+R +HR
Sbjct: 125 AEGMGYLESKRFIHR 139
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNG 96
+ +PE LK +S SD W G L+EM Q P+ I LNG
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW----IGLNG 220
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE LK +S SD W G L+E+ ++ P+
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
+L H N++ L + + +V ELA G L + R+ + H + Y Q+
Sbjct: 67 SLDHRNLIRLYGVVLT---PPMKMVTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQV 120
Query: 179 AAALQYVHSRRILHR 193
A + Y+ S+R +HR
Sbjct: 121 AEGMGYLESKRFIHR 135
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + K+S SDVWS G +++E S+ PY
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 574
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE + K+S SDVWS G +++E + Q P+
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 574
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + K+S SDVWS G +++E S+ PY
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE + K+S SDVWS G +++E + Q P+
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 52 YYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++ P
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVLGTP 254
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 16 YYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 235
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 80 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 137
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 138 LYMYQLFRSLAYIHSFGICHR 158
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + K+S SDVWS G +++E S+ PY
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 573
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE + K+S SDVWS G +++E + Q P+
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 573
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ SPE +YS SDVWS G +++EV S PY
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 205
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEM 80
+ SPE +YS SDVWS G +++E+
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEV 197
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNG 96
+ +PE LK +S SD W G L+EM Q P+ I LNG
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW----IGLNG 220
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE LK +S SD W G L+E+ ++ P+
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
+L H N++ L + + +V ELA G L + R+ + H + Y Q+
Sbjct: 67 SLDHRNLIRLYGVVLT---PPMKMVTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQV 120
Query: 179 AAALQYVHSRRILHR 193
A + Y+ S+R +HR
Sbjct: 121 AEGMGYLESKRFIHR 135
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNG 96
+ +PE LK +S SD W G L+EM Q P+ I LNG
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW----IGLNG 230
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE LK +S SD W G L+E+ ++ P+
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
+L H N++ L + + +V ELA G L + R+ + H + Y Q+
Sbjct: 77 SLDHRNLIRLYGVVLT---PPMKMVTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQV 130
Query: 179 AAALQYVHSRRILHR 193
A + Y+ S+R +HR
Sbjct: 131 AEGMGYLESKRFIHR 145
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER 58
+M+ E + +++ SDVWS G ++E+ +F PY P R
Sbjct: 187 WMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR 228
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNG 96
+ +PE LK +S SD W G L+EM Q P+ I LNG
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW----IGLNG 220
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE LK +S SD W G L+E+ ++ P+
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
+L H N++ L + + +V ELA G L + R+ + H + Y Q+
Sbjct: 67 SLDHRNLIRLYGVVLT---PPMKMVTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQV 120
Query: 179 AAALQYVHSRRILHR 193
A + Y+ S+R +HR
Sbjct: 121 AEGMGYLESKRFIHR 135
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ SPE +YS SDVWS G +++EV S PY
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 206
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEM 80
+ SPE +YS SDVWS G +++E+
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWEV 198
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + K+S SDVWS G +++E S+ PY
Sbjct: 194 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 229
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE + K+S SDVWS G +++E + Q P+
Sbjct: 194 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 229
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNG 96
+ +PE LK +S SD W G L+EM Q P+ I LNG
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW----IGLNG 230
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE LK +S SD W G L+E+ ++ P+
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
+L H N++ L + + +V ELA G L + R+ + H + Y Q+
Sbjct: 77 SLDHRNLIRLYGVVLT---PPMKMVTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQV 130
Query: 179 AAALQYVHSRRILHR 193
A + Y+ S+R +HR
Sbjct: 131 AEGMGYLESKRFIHR 145
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ SPE +YS SDVWS G +++EV S PY
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 208
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEM 80
+ SPE +YS SDVWS G +++E+
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWEV 200
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ SPE +YS SDVWS G +++EV S PY
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 203
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEM 80
+ SPE +YS SDVWS G +++E+
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEV 195
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + ++ SDVWS G +LYE+ ++ PY
Sbjct: 177 WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPY 212
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +LYE+V
Sbjct: 177 WTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 52 YYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++ P
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVLGTP 261
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 16 YYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 242
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 87 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 144
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 145 LYMYQLFRSLAYIHSFGICHR 165
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + K+S SDVWS G +++E S+ PY
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE + K+S SDVWS G +++E + Q P+
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + K+S SDVWS G +++E S+ PY
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE + K+S SDVWS G +++E + Q P+
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ SPE +YS SDVWS G +++EV S PY
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 205
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEM 80
+ SPE +YS SDVWS G +++E+
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEV 197
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 52 YYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++ P
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVLGTP 250
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 16 YYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 231
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 76 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 133
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 134 LYMYQLFRSLAYIHSFGICHR 154
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 52 YYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++ P
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVLGTP 254
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 16 YYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 235
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 80 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 137
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 138 LYMYQLFRSLAYIHSFGICHR 158
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ SPE +YS SDVWS G +++EV S PY
Sbjct: 190 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 225
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEM 80
+ SPE +YS SDVWS G +++E+
Sbjct: 190 WASPEVFSFSRYSSKSDVWSFGVLMWEV 217
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 52 YYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM 103
YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKV 238
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 16 YYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 223
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR---QKKCHLAECLVWSY 174
+ L H NIV LR F S ++ + L L A V R + K L V Y
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLY 127
Query: 175 FRQIAAALQYVHSRRILHR 193
Q+ +L Y+HS I HR
Sbjct: 128 MYQLFRSLAYIHSFGICHR 146
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 52 YYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++ P
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVLGTP 246
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 16 YYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 227
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 72 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 129
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 130 LYMYQLFRSLAYIHSFGICHR 150
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 52 YYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++ P
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVLGTP 242
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 16 YYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 223
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 68 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 125
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 126 LYMYQLFRSLAYIHSFGICHR 146
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+ E + KY+ SDVWS G ++E+ +F PY
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+M+ E + KY+ SDVWS G ++E++
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 52 YYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++ P
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVLGTP 243
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 16 YYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 224
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 69 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 126
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 127 LYMYQLFRSLAYIHSFGICHR 147
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 52 YYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++ P
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVLGTP 242
Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 16 YYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 223
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 68 RKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 125
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 126 LYMYQLFRSLAYIHSFGICHR 146
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 46 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
+++ + YY +PE + Y+ D+WS+GC+ EM+ L P F
Sbjct: 190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM-LGEPIF 232
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 10 SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPS 68
+++ + YY +PE + Y+ D+WS+GC+ E+ LG P + +L
Sbjct: 190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEM--MLGEPIFRGDNSAGQLH----E 243
Query: 69 DVWSLGCVLYEMVALQSP 86
V LGC E++ +P
Sbjct: 244 IVRVLGCPSREVLRKLNP 261
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 118 KTLHHPNIVELRSAFASRSGQ--ELFLVLELADQGDLALVIAECRQK-KCHLAECLVWSY 174
+ + HPN+V+L++ F S + E+FL L L + + K K + L+ Y
Sbjct: 87 RIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY 146
Query: 175 FRQIAAALQYVHSRRILHR 193
Q+ +L Y+HS I HR
Sbjct: 147 MYQLLRSLAYIHSIGICHR 165
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 52 YYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
YY +PE + Y+ D+WS GCV+ E++ Q P F ++ L + I++ P
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ-PLFPGESGIDQLVEIIKVLGTP 261
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 16 YYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLG 74
YY +PE + Y+ D+WS GCV+ E+ G P + + +L + LG
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAEL--MQGQPLFPGESGIDQLV----EIIKVLG 259
Query: 75 CVLYEMVALQSPFFSKH 91
E + +P + +H
Sbjct: 260 TPSREQIKTMNPNYMEH 276
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 52 YYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM 103
YY +PE + Y+ DVWS GCVL E++ L P F ++ L + I++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKV 238
Score = 30.4 bits (67), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 16 YYMSPERL-KELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
YY +PE + Y+ DVWS GCVL E+ LG P +
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIF 223
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
+ L H NIV LR F S SG++ L LVL+ + + R K+ L V
Sbjct: 68 RKLDHCNIVRLRYFFYS-SGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVK 125
Query: 173 SYFRQIAAALQYVHSRRILHR 193
Y Q+ +L Y+HS I HR
Sbjct: 126 LYMYQLFRSLAYIHSFGICHR 146
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+M+ E + KY+ SDVWS G ++E+ +F PY
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 236
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+M+ E + KY+ SDVWS G ++E++
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ ++ PY +PE ++ L+ +
Sbjct: 178 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY 229
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
KTL H +V+L + + + ++++ E +G L + K L + + +S Q
Sbjct: 65 KTLQHDKLVKLHAVV---TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA--Q 119
Query: 178 IAAALQYVHSRRILHRGERETFLSVLGDCVRTVSE 212
IA + ++ R +HR R + V V +++
Sbjct: 120 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIAD 154
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMV 81
+ +PE + ++ SDVWS G +L E+V
Sbjct: 178 WTAPEAINFGSFTIKSDVWSFGILLMEIV 206
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+MSPE + +++ SDVW ++E+ SF P++
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 216
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFS-KHISLNGLCKRIEMALFPPLP 110
+MSPE + +++ SDVW ++E+++ + PFF ++ + G+ ++ + P L
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC 239
Query: 111 SGVLYS 116
VLY+
Sbjct: 240 PPVLYT 245
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+MSPE + +++ SDVW ++E+ SF P++
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 228
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFS-KHISLNGLCKRIEMALFPPLP 110
+MSPE + +++ SDVW ++E+++ + PFF ++ + G+ ++ + P L
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC 251
Query: 111 SGVLYS 116
VLY+
Sbjct: 252 PPVLYT 257
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
+MSPE + +++ SDVW ++E+ SF P++
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 212
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFS-KHISLNGLCKRIEMALFPPLP 110
+MSPE + +++ SDVW ++E+++ + PFF ++ + G+ ++ + P L
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC 235
Query: 111 SGVLYS 116
VLY+
Sbjct: 236 PPVLYT 241
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ ++ PY +PE ++ L+ +
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY 402
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
KTL H +V+L + + ++++ E +G L + K L + + +S Q
Sbjct: 238 KTLQHDKLVKLHAVVTK---EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS--AQ 292
Query: 178 IAAALQYVHSRRILHRGERETFLSVLGDCVRTVSE 212
IA + ++ R +HR R + V V +++
Sbjct: 293 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIAD 327
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 50 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS------LNGLCKRIE 102
T +Y PE L E Y P D+W GC++ EM +SP + ++ LC I
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSIT 250
Query: 103 MALFPPLPSGVLY 115
++P + + LY
Sbjct: 251 PEVWPNVDNYELY 263
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEV 44
T +Y PE L E Y P D+W GC++ E+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 172 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 223
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 172 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 1 MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
+S ++ +FL P + P+ ++LK +D+ + V + T Y S E L
Sbjct: 194 VSTAPATAGNFLVNP--LEPKNAEKLKVKI-ADLGNACWVHKHFTEDIQTRQYRSLEVLI 250
Query: 61 ELKYSFPSDVWSLGCVLYEMVA 82
Y+ P+D+WS C+ +E+
Sbjct: 251 GSGYNTPADIWSTACMAFELAT 272
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ ++ PY +PE ++ L+ +
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY 386
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
KTL H +V+L + + + ++++ E +G L + K L + + +S Q
Sbjct: 232 KTLQHDKLVKLHAVV---TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS--AQ 286
Query: 178 IAAALQYVHSRRILHRGERETFLSVLGDCVRTVSE 212
IA + ++ R +HR R + V V +++
Sbjct: 287 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIAD 321
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 222
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 50 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS------LNGLCKRIE 102
T +Y PE L E Y P D+W GC++ EM +SP + ++ LC I
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSIT 250
Query: 103 MALFPPLPSGVLY 115
++P + + LY
Sbjct: 251 PEVWPNVDNYELY 263
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEV 44
T +Y PE L E Y P D+W GC++ E+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 50 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS------LNGLCKRIE 102
T +Y PE L E Y P D+W GC++ EM +SP + ++ LC I
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSIT 250
Query: 103 MALFPPLPSGVLY 115
++P + + LY
Sbjct: 251 PEVWPNVDNYELY 263
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEV 44
T +Y PE L E Y P D+W GC++ E+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 227
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 228
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 1 MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
+S ++ +FL P + P+ ++LK +D+ + V + T Y S E L
Sbjct: 210 VSTAPATAGNFLVNP--LEPKNAEKLKVKI-ADLGNACWVHKHFTEDIQTRQYRSLEVLI 266
Query: 61 ELKYSFPSDVWSLGCVLYEMVA 82
Y+ P+D+WS C+ +E+
Sbjct: 267 GSGYNTPADIWSTACMAFELAT 288
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 227
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 229
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 98 CKRI--EMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQ---ELFLVLELADQGDL 152
CKRI E+A+ L+H ++V++ + + EL++VLE+AD
Sbjct: 96 CKRILREIAIL-----------NRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFK 144
Query: 153 ALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
L + +L E + + + ++YVHS ILHR + V DC
Sbjct: 145 KLF-----RTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDC 193
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 50 TPYYMSPER-LKELKYSFPSDVWSLGCVLYEMVAL 83
T +Y +PE L + Y+ DVWS+GC+ E++ +
Sbjct: 246 TRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPER-LKELKYSFPSDVWSLGCVLYEV 44
T +Y +PE L + Y+ DVWS+GC+ E+
Sbjct: 246 TRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 227
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 235
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 50 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS------LNGLCKRIE 102
T +Y PE L E Y P D+W GC++ EM +SP + ++ LC I
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSIT 249
Query: 103 MALFPPLPSGVLY 115
++P + + LY
Sbjct: 250 PEVWPNVDNYELY 262
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 14 TPYYMSPERL-KELKYSFPSDVWSLGCVLYEV 44
T +Y PE L E Y P D+W GC++ E+
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 227
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 233
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 236
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 232
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 233
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY--YMSPERLKELKYSF 66
+ +PE + ++ SDVWS G +L E+ + PY +PE ++ L+ +
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 237
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ SDVWS G +L E+V
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 20 PERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
PE L K+S SD+W+ G +++E+ S PY
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 56 PERLKELKYSFPSDVWSLGCVLYEMVAL 83
PE L K+S SD+W+ G +++E+ +L
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSL 202
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 20 PERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
PE L K+S SD+W+ G +++E+ S PY
Sbjct: 181 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 213
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 56 PERLKELKYSFPSDVWSLGCVLYEMVAL 83
PE L K+S SD+W+ G +++E+ +L
Sbjct: 181 PEVLMYSKFSSKSDIWAFGVLMWEIYSL 208
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 11/85 (12%)
Query: 49 GTPYYMSPERLKELK-----YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNG-----LC 98
G+ YM+PE ++ Y D+WSLG +LY +++ PF + S G C
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 99 KRIEMALFPPLPSGVL-YSDKTLHH 122
+ LF + G + DK H
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAH 267
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 25/95 (26%)
Query: 13 GTPYYMSPERLKELK-----YSFPSDVWSLGCVLYEVDS----FLG-------------- 49
G+ YM+PE ++ Y D+WSLG +LY + S F+G
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 50 -TPYYMSPERLKELKYSFPSDVWS-LGCVLYEMVA 82
M E ++E KY FP W+ + C ++++
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLIS 277
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 20 PERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
PE L K+S SD+W+ G +++E+ S PY
Sbjct: 174 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 206
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 56 PERLKELKYSFPSDVWSLGCVLYEMVAL 83
PE L K+S SD+W+ G +++E+ +L
Sbjct: 174 PEVLMYSKFSSKSDIWAFGVLMWEIYSL 201
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 11/85 (12%)
Query: 49 GTPYYMSPERLKELK-----YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNG-----LC 98
G+ YM+PE ++ Y D+WSLG +LY +++ PF + S G C
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 99 KRIEMALFPPLPSGVL-YSDKTLHH 122
+ LF + G + DK H
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAH 267
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 25/95 (26%)
Query: 13 GTPYYMSPERLKELK-----YSFPSDVWSLGCVLYEVDS----FLG-------------- 49
G+ YM+PE ++ Y D+WSLG +LY + S F+G
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 50 -TPYYMSPERLKELKYSFPSDVWS-LGCVLYEMVA 82
M E ++E KY FP W+ + C ++++
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLIS 277
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 20 PERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
PE L K+S SD+W+ G +++E+ S PY
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 202
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 56 PERLKELKYSFPSDVWSLGCVLYEMVAL 83
PE L K+S SD+W+ G +++E+ +L
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEIYSL 197
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 20 PERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
PE L K+S SD+W+ G +++E+ S PY
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 56 PERLKELKYSFPSDVWSLGCVLYEMVAL 83
PE L K+S SD+W+ G +++E+ +L
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSL 202
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + ++ S+VWS G +LYE+ ++ PY
Sbjct: 176 WTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPY 211
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
+ +PE + ++ S+VWS G +LYE+V
Sbjct: 176 WTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 20 PERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
PE L K+S SD+W+ G +++E+ S PY
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 56 PERLKELKYSFPSDVWSLGCVLYEMVAL 83
PE L K+S SD+W+ G +++E+ +L
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSL 217
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + K+S SDVWS G ++E S+ PY
Sbjct: 179 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 214
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE + K+S SDVWS G ++E ++ Q P+
Sbjct: 179 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 20 PERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
PE L K+S SD+W+ G +++E+ S PY
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 56 PERLKELKYSFPSDVWSLGCVLYEMVAL 83
PE L K+S SD+W+ G +++E+ +L
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSL 217
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQEL---FLVLELADQGDLA--LVIAECRQKKCHLAECLVW 172
K HPN++ L S Q + ++L GDL L+ + H+ +
Sbjct: 91 KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 173 SYFRQIAAALQYVHSRRILHR 193
+ IA ++Y+ +R LHR
Sbjct: 151 KFMVDIALGMEYLSNRNFLHR 171
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+++ E L + Y+ SDVW+ G ++E+ + TPY
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY 250
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 57 ERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS 93
E L+ +++ SDVWS G +L+E++ +P + +HI
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY-RHID 233
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 21 ERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
E L+ +++ SDVWS G +L+E+ + PY
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
+ +PE + K+S SDVWS G ++E S+ PY
Sbjct: 505 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 540
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 53 YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
+ +PE + K+S SDVWS G ++E ++ Q P+
Sbjct: 505 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 540
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 41 LYEVDSFLGTPYYMSPERL--KELKYSFPSDVWSLGCVLYEMVALQSPF 87
++ V LG +M+PE + +E Y+ +D +S +LY ++ + PF
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 36 SLGCVLYEVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFF 88
+ G + S + T +Y +P+ L + YS D+WS GC+L EM+ P F
Sbjct: 157 AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMIT-GKPLF 209
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 2 SVKTSSVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
+ ++ S + T +Y +P+ L + YS D+WS GC+L E+ G P + +
Sbjct: 159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEM--ITGKPLFPGTNDEE 216
Query: 61 ELKYSF 66
+LK F
Sbjct: 217 QLKLIF 222
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 41 LYEVDSFLGTPYYMSPERL--KELKYSFPSDVWSLGCVLYEMVALQSPF 87
++ V LG +M+PE + +E Y+ +D +S +LY ++ + PF
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 30.0 bits (66), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 16/77 (20%)
Query: 48 LGTPYYMSPERLKEL-------KYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
+GT YM+PE L E Y + +D+W+ G VL+E+ ++ +NG+ +
Sbjct: 178 VGTKRYMAPEVLDEQIRTDCFESYKW-TDIWAFGLVLWEI--------ARRTIVNGIVED 228
Query: 101 IEMALFPPLPSGVLYSD 117
+ +P+ + D
Sbjct: 229 YRPPFYDVVPNDPSFED 245
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 8/40 (20%)
Query: 12 LGTPYYMSPERLKEL-------KYSFPSDVWSLGCVLYEV 44
+GT YM+PE L E Y + +D+W+ G VL+E+
Sbjct: 178 VGTKRYMAPEVLDEQIRTDCFESYKW-TDIWAFGLVLWEI 216
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 41 LYEVDSFLGTPYYMSPERL--KELKYSFPSDVWSLGCVLYEMVALQSPF 87
++ V LG +M+PE + +E Y+ +D +S +LY ++ + PF
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 230
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 234
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 218
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 225
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 228
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
+M+ E + Y+ SDVWS G ++E+ +F PY P
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 258
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,374,758
Number of Sequences: 62578
Number of extensions: 256600
Number of successful extensions: 3565
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 604
Number of HSP's gapped (non-prelim): 2806
length of query: 215
length of database: 14,973,337
effective HSP length: 95
effective length of query: 120
effective length of database: 9,028,427
effective search space: 1083411240
effective search space used: 1083411240
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 49 (23.5 bits)