BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18121
(109 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242024054|ref|XP_002432445.1| hypothetical protein Phum_PHUM584210 [Pediculus humanus corporis]
gi|212517878|gb|EEB19707.1| hypothetical protein Phum_PHUM584210 [Pediculus humanus corporis]
Length = 85
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 14 QVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIVVY-FSRSGRKLKDF 72
Q L +SLERILEEAHLSGEL LSGRKLKDFP SGGKYDLSD+VI + +SR+ K ++
Sbjct: 6 QNQLTKSLERILEEAHLSGELKLSGRKLKDFPKSGGKYDLSDTVIADFNYSRNFDKQCEY 65
Query: 73 PN 74
N
Sbjct: 66 IN 67
>gi|312375689|gb|EFR23010.1| hypothetical protein AND_13841 [Anopheles darlingi]
Length = 152
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 39/46 (84%)
Query: 14 QVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIV 59
Q L RSLERILE+AHLSGEL LSGRKLKDFP + GKY+LSD+VI
Sbjct: 47 QSQLTRSLERILEDAHLSGELKLSGRKLKDFPKAAGKYNLSDTVIA 92
>gi|158299038|ref|XP_319156.4| AGAP010012-PA [Anopheles gambiae str. PEST]
gi|157014176|gb|EAA13901.4| AGAP010012-PA [Anopheles gambiae str. PEST]
Length = 700
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
L RSLERILE+AHLSGEL LSGRKLKDFP + GKY+LSD+VI
Sbjct: 2 QLTRSLERILEDAHLSGELKLSGRKLKDFPKAAGKYNLSDTVI 44
>gi|322780036|gb|EFZ09796.1| hypothetical protein SINV_05952 [Solenopsis invicta]
Length = 62
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MAVLTNMNLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSG----GKYDLSDS 56
MA++ + N++ Q L RSLERILEEAHLSGEL LSGRKLKDFP G KY+L D+
Sbjct: 1 MAMVAS-NMSGHIQKQLTRSLERILEEAHLSGELKLSGRKLKDFPKVGKAGTAKYNLQDT 59
Query: 57 VIV 59
VI
Sbjct: 60 VIA 62
>gi|380012198|ref|XP_003690173.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1-like [Apis florea]
Length = 730
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/62 (61%), Positives = 45/62 (72%), Gaps = 5/62 (8%)
Query: 1 MAVLTNMNLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSG----GKYDLSDS 56
MA++ + N++ Q L RSLERILEEAHLSGEL LSGRKLKDFP G KY+L D+
Sbjct: 1 MAMVAS-NMSGHIQKQLTRSLERILEEAHLSGELKLSGRKLKDFPKVGKTGSSKYNLQDT 59
Query: 57 VI 58
VI
Sbjct: 60 VI 61
>gi|66500629|ref|XP_392557.2| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1-like [Apis mellifera]
Length = 758
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/62 (61%), Positives = 45/62 (72%), Gaps = 5/62 (8%)
Query: 1 MAVLTNMNLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSG----GKYDLSDS 56
MA++ + N++ Q L RSLERILEEAHLSGEL LSGRKLKDFP G KY+L D+
Sbjct: 1 MAMVAS-NMSGHIQKQLTRSLERILEEAHLSGELKLSGRKLKDFPKVGKTGSSKYNLQDT 59
Query: 57 VI 58
VI
Sbjct: 60 VI 61
>gi|350425067|ref|XP_003494001.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1-like [Bombus impatiens]
Length = 757
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
Query: 8 NLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSG----GKYDLSDSVI 58
N++ Q L RSLERILEEAHLSGEL LSGRKLKDFP G KY+L D+VI
Sbjct: 7 NMSGHIQKQLTRSLERILEEAHLSGELKLSGRKLKDFPKVGKTGSSKYNLQDTVI 61
>gi|340709272|ref|XP_003393235.1| PREDICTED: hypothetical protein LOC100649436 [Bombus terrestris]
Length = 826
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 40/56 (71%), Gaps = 4/56 (7%)
Query: 8 NLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSG----GKYDLSDSVIV 59
N++ Q L RSLERILEEAHLSGEL LSGRKLKDFP G KY+L D+VI
Sbjct: 7 NMSGHIQKQLTRSLERILEEAHLSGELKLSGRKLKDFPKVGKTGSSKYNLQDTVIA 62
>gi|332029861|gb|EGI69730.1| Leucine-rich repeat and calponin-like proteiny domain-containing
protein 3 [Acromyrmex echinatior]
Length = 753
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/62 (61%), Positives = 45/62 (72%), Gaps = 5/62 (8%)
Query: 1 MAVLTNMNLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGG----KYDLSDS 56
MA++ + N++ Q L RSLERILEEAHLSGEL LSGRKLKDFP G KY+L D+
Sbjct: 1 MAMVAS-NMSGHIQKQLTRSLERILEEAHLSGELKLSGRKLKDFPKVGKAGVVKYNLQDT 59
Query: 57 VI 58
VI
Sbjct: 60 VI 61
>gi|383865043|ref|XP_003707985.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1-like [Megachile rotundata]
Length = 756
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 9/81 (11%)
Query: 1 MAVLTNMNLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSG----GKYDLSDS 56
MA++ + N++ Q L RSLERILEEAHLSGEL LSGRKLKDFP G KY+L D+
Sbjct: 1 MAMVAS-NMSGHIQKQLTRSLERILEEAHLSGELKLSGRKLKDFPKVGKPGSSKYNLQDT 59
Query: 57 VIV----VYFSRSGRKLKDFP 73
V F+ ++ +FP
Sbjct: 60 VFADLSKNRFAELPEEVTEFP 80
>gi|195401100|ref|XP_002059152.1| GJ16236 [Drosophila virilis]
gi|194156026|gb|EDW71210.1| GJ16236 [Drosophila virilis]
Length = 1150
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/43 (74%), Positives = 36/43 (83%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
L RSLERILEEAHLSGEL L+ RKLKDFP +G KY L+D+VI
Sbjct: 44 QLTRSLERILEEAHLSGELILTNRKLKDFPKTGTKYSLTDTVI 86
>gi|24584802|ref|NP_724046.1| Leucine-rich-repeats and calponin homology domain protein, isoform
A [Drosophila melanogaster]
gi|15292563|gb|AAK93550.1| SD07737p [Drosophila melanogaster]
gi|22946706|gb|AAN10986.1| Leucine-rich-repeats and calponin homology domain protein, isoform
A [Drosophila melanogaster]
gi|220947388|gb|ACL86237.1| CG6860-PA [synthetic construct]
gi|220952838|gb|ACL88962.1| CG6860-PA [synthetic construct]
Length = 809
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 35/44 (79%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIV 59
L RSLERILEEAH SGEL L+ RKLKDFP +G KY L+D+VI
Sbjct: 61 QLTRSLERILEEAHFSGELILTNRKLKDFPRTGTKYSLTDTVIA 104
>gi|194880509|ref|XP_001974454.1| GG21751 [Drosophila erecta]
gi|190657641|gb|EDV54854.1| GG21751 [Drosophila erecta]
Length = 1136
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
L RSLERILEEAH SGEL L+ RKLKDFP +G KY L+D+VI
Sbjct: 65 QLTRSLERILEEAHFSGELILTNRKLKDFPRTGTKYSLTDTVI 107
>gi|195483893|ref|XP_002090474.1| GE13141 [Drosophila yakuba]
gi|194176575|gb|EDW90186.1| GE13141 [Drosophila yakuba]
Length = 1131
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
L RSLERILEEAH SGEL L+ RKLKDFP +G KY L+D+VI
Sbjct: 63 QLTRSLERILEEAHFSGELILTNRKLKDFPRTGTKYSLTDTVI 105
>gi|195432948|ref|XP_002064477.1| GK23871 [Drosophila willistoni]
gi|194160562|gb|EDW75463.1| GK23871 [Drosophila willistoni]
Length = 1112
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
L RSLERILEEAH SGEL L+ RKLKDFP +G KY L+D+VI
Sbjct: 37 QLTRSLERILEEAHFSGELILTNRKLKDFPKTGTKYSLTDTVI 79
>gi|195344672|ref|XP_002038905.1| GM17134 [Drosophila sechellia]
gi|194134035|gb|EDW55551.1| GM17134 [Drosophila sechellia]
Length = 1135
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
L RSLERILEEAH SGEL L+ RKLKDFP +G KY L+D+VI
Sbjct: 61 QLTRSLERILEEAHFSGELILTNRKLKDFPRTGTKYSLTDTVI 103
>gi|24584804|ref|NP_609834.2| Leucine-rich-repeats and calponin homology domain protein, isoform
B [Drosophila melanogaster]
gi|7298377|gb|AAF53603.1| Leucine-rich-repeats and calponin homology domain protein, isoform
B [Drosophila melanogaster]
Length = 1135
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
L RSLERILEEAH SGEL L+ RKLKDFP +G KY L+D+VI
Sbjct: 61 QLTRSLERILEEAHFSGELILTNRKLKDFPRTGTKYSLTDTVI 103
>gi|198477794|ref|XP_002136437.1| GA23113 [Drosophila pseudoobscura pseudoobscura]
gi|198145202|gb|EDY71906.1| GA23113 [Drosophila pseudoobscura pseudoobscura]
Length = 120
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 34/41 (82%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIV 59
RSLERILEEAH SGEL L+ RKLKDFP +G KY L+D+VI
Sbjct: 47 RSLERILEEAHFSGELILTNRKLKDFPKTGTKYALTDTVIA 87
>gi|194758942|ref|XP_001961715.1| GF15108 [Drosophila ananassae]
gi|190615412|gb|EDV30936.1| GF15108 [Drosophila ananassae]
Length = 1149
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
L RSLERILEEAH SGEL L+ RKLKDFP +G KY L+D+VI
Sbjct: 69 QLTRSLERILEEAHFSGELILTNRKLKDFPKAGTKYVLTDTVI 111
>gi|195114916|ref|XP_002002013.1| GI14262 [Drosophila mojavensis]
gi|193912588|gb|EDW11455.1| GI14262 [Drosophila mojavensis]
Length = 1142
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/43 (69%), Positives = 35/43 (81%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
L RSLERILEEAH SGEL L+ RKLKDFP +G K+ L+D+VI
Sbjct: 36 QLTRSLERILEEAHFSGELILTNRKLKDFPKTGAKFALTDTVI 78
>gi|198474131|ref|XP_001356563.2| GA19911 [Drosophila pseudoobscura pseudoobscura]
gi|198138263|gb|EAL33627.2| GA19911 [Drosophila pseudoobscura pseudoobscura]
Length = 1178
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
RSLERILEEAH SGEL L+ RKLKDFP +G KY L+D+VI
Sbjct: 47 RSLERILEEAHFSGELILTNRKLKDFPKTGTKYALTDTVI 86
>gi|195147654|ref|XP_002014794.1| GL18758 [Drosophila persimilis]
gi|194106747|gb|EDW28790.1| GL18758 [Drosophila persimilis]
Length = 1174
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
RSLERILEEAH SGEL L+ RKLKDFP +G KY L+D+VI
Sbjct: 47 RSLERILEEAHFSGELILTNRKLKDFPKTGTKYALTDTVI 86
>gi|270007220|gb|EFA03668.1| hypothetical protein TcasGA2_TC013766 [Tribolium castaneum]
Length = 716
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 1 MAVLTNMNLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
MA+L N+ Q L RSLE+IL++A+ SGEL LS RKLKDFP + KY+L D+VI
Sbjct: 1 MAMLVQ-NINGHIQNQLTRSLEKILDDANQSGELKLSNRKLKDFPKTSEKYNLRDTVI 57
>gi|91082255|ref|XP_973064.1| PREDICTED: similar to CG6860 CG6860-PA [Tribolium castaneum]
Length = 715
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 1 MAVLTNMNLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
MA+L N+ Q L RSLE+IL++A+ SGEL LS RKLKDFP + KY+L D+VI
Sbjct: 1 MAMLVQ-NINGHIQNQLTRSLEKILDDANQSGELKLSNRKLKDFPKTSEKYNLRDTVI 57
>gi|241998146|ref|XP_002433716.1| calponin homology (CH) domain-containing, chdc/lrch [Ixodes
scapularis]
gi|215495475|gb|EEC05116.1| calponin homology (CH) domain-containing, chdc/lrch [Ixodes
scapularis]
Length = 646
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 12 QSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
QS L R+LER+LE+A L+GEL L+GRKL++ P KYDL D+V
Sbjct: 14 QSAAQLTRTLERLLEDAQLTGELRLNGRKLRELPKCTAKYDLRDTV 59
>gi|427784283|gb|JAA57593.1| Putative leucine-rich repeat lrr protein [Rhipicephalus
pulchellus]
Length = 705
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 1 MAVLTNMNL-TSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIV 59
MA T + L + S L R+LER+LEEA +G+L L+GRKLK+ P KYDL D +
Sbjct: 1 MAAPTALALQAASSNAQLTRTLERLLEEAQHTGDLKLNGRKLKELPPYAAKYDLRD---I 57
Query: 60 VYFSRSGRKLKDFP 73
V+ S +L + P
Sbjct: 58 VHADLSKNRLSELP 71
>gi|321457367|gb|EFX68455.1| hypothetical protein DAPPUDRAFT_203267 [Daphnia pulex]
Length = 367
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 10 TSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIVVYFSRSGRKL 69
T Q L R+LER+LEEA +SGEL +S R+L++FP KY+L+D+ VY S KL
Sbjct: 8 TVGPQSPLNRNLERLLEEAQISGELRVSSRRLREFPKVANKYNLNDT---VYSDLSKNKL 64
Query: 70 KDFPN 74
+ P+
Sbjct: 65 SELPS 69
>gi|328720363|ref|XP_001947101.2| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3-like [Acyrthosiphon pisum]
Length = 577
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIV 59
+ RSLE++LE+AHL GEL L GRKLK+FP KYDLSD+ I
Sbjct: 16 MTRSLEKLLEDAHLCGELKLGGRKLKEFP-VTNKYDLSDTTIA 57
>gi|431910593|gb|ELK13660.1| Leucine-rich repeat and calponin like proteiny domain-containing
protein 2 [Pteropus alecto]
Length = 733
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Query: 8 NLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
NL S H ARS++R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 89 NLGSLQPQHTARSMDRALEEAGNSGILSLSGRKLRDFPGSG--YDLTDT 135
>gi|326667927|ref|XP_001921929.2| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 [Danio rerio]
Length = 717
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 9 LTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIV 59
+ Q +H ARSLER LE+A SG LN+SGRKL+D+P G YDL+D+ +
Sbjct: 30 MQQQHPLHTARSLERALEDAVCSGMLNISGRKLRDYP--GLNYDLTDTTLA 78
>gi|189523516|ref|XP_689376.3| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 [Danio rerio]
Length = 655
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 2 AVLTNMN-LTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
A+ TN++ L S + + L R LER LE+A SG LNLS RKLK+FP + YDL+D+V
Sbjct: 18 ALQTNLSGLGSSTNLPLNRGLERALEDAANSGFLNLSTRKLKEFPRTASNYDLTDTV 74
>gi|363732748|ref|XP_003641148.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 isoform 1 [Gallus gallus]
Length = 734
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/43 (67%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 14 QVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
Q H RSL+R LEEA SG L LSGRKL+DFP SG YDLSD+
Sbjct: 56 QPHTVRSLDRALEEAGSSGILCLSGRKLRDFPGSG--YDLSDT 96
>gi|118089410|ref|XP_420210.2| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 isoform 2 [Gallus gallus]
Length = 751
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/43 (67%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 14 QVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
Q H RSL+R LEEA SG L LSGRKL+DFP SG YDLSD+
Sbjct: 56 QPHTVRSLDRALEEAGSSGILCLSGRKLRDFPGSG--YDLSDT 96
>gi|301611312|ref|XP_002935197.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3-like, partial [Xenopus
(Silurana) tropicalis]
Length = 541
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
RSLER LEEA ++G LNLSGRKL++FP S ++DLSD+
Sbjct: 40 RSLERALEEASVTGVLNLSGRKLREFPRSAVQHDLSDTT 78
>gi|390334684|ref|XP_780646.3| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2-like [Strongylocentrotus
purpuratus]
Length = 759
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIVVYFSRSGRKLKDFP 73
RSLE++LE+A SG+LNL GR L+D+P S K+DL D+V + S KL + P
Sbjct: 14 RSLEKVLEDAQKSGKLNLGGRNLRDYPKSAEKFDLFDTVEI---DLSKNKLSELP 65
>gi|410925222|ref|XP_003976080.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 1-like [Takifugu
rubripes]
Length = 569
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 11 SQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIVVYFSRSGRKLK 70
S S + R LER LEEA SG LNLS RKLK+FP + +DLSD+V S +L
Sbjct: 27 SSSNLPPNRGLERALEEASSSGVLNLSSRKLKEFPQTAANHDLSDTVEA---DLSKNRLA 83
Query: 71 DF 72
DF
Sbjct: 84 DF 85
>gi|47217123|emb|CAG02624.1| unnamed protein product [Tetraodon nigroviridis]
Length = 643
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIVVYFSRSGRKLKDF 72
R LER LEEA SG LNLS RKLK+FP + +DLSD+V S +L DF
Sbjct: 6 RGLERALEEASSSGVLNLSSRKLKEFPQTAASHDLSDTVEA---DLSKNRLTDF 56
>gi|348563709|ref|XP_003467649.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 2-like [Cavia
porcellus]
Length = 770
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 8 NLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
N +S H RSL+R LEEA SG L+LSGRKL+DFP GG YDL+D+
Sbjct: 72 NPSSLQPQHTVRSLDRALEEASNSGILSLSGRKLRDFP--GGGYDLTDTT 119
>gi|410906667|ref|XP_003966813.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3-like [Takifugu rubripes]
Length = 678
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 13 SQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIVVYFSRSGRKLKDF 72
+ V +RS+E+ LEEA +SG LNLS R+LK+FP S YDLSD + + S +L +
Sbjct: 11 ATVAASRSVEKALEEAAVSGALNLSNRRLKEFPRSARNYDLSD---ITHADLSKNRLCEL 67
Query: 73 PNSGGKYDLSDSVIVVYFN 91
P ++ +S + +Y N
Sbjct: 68 PEELCQF-MSLETLSLYHN 85
>gi|348518628|ref|XP_003446833.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 [Oreochromis niloticus]
Length = 717
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
Query: 12 QSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
Q Q H ARSL+R LE+A SG LNLSGRKL+++P G YDL+D+
Sbjct: 33 QQQHHTARSLDRALEDAVCSGILNLSGRKLREYP--GMSYDLTDT 75
>gi|348540806|ref|XP_003457878.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 [Oreochromis niloticus]
Length = 797
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
RSL+R L+EA +G LNLSGRKLK+FP S +DL+D+
Sbjct: 40 RSLDRALDEAAATGSLNLSGRKLKEFPRSAANHDLTDT 77
>gi|348543009|ref|XP_003458976.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4-like [Oreochromis
niloticus]
Length = 743
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 13 SQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIVVYFSRSGRKLKDF 72
+ V +RS+E+ LEEA SG LNLS RKLK+FP S YDLSD + + S +L +
Sbjct: 11 ATVAASRSVEKALEEAATSGALNLSNRKLKEFPRSAKNYDLSD---ITHADLSKNRLCEL 67
Query: 73 P 73
P
Sbjct: 68 P 68
>gi|345807935|ref|XP_003435698.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 [Canis lupus familiaris]
Length = 748
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 32/41 (78%), Gaps = 2/41 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 75 HTVRSLDRALEEAGNSGILSLSGRKLRDFPGSG--YDLTDT 113
>gi|410989222|ref|XP_004000862.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 isoform 2 [Felis catus]
Length = 749
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 32/41 (78%), Gaps = 2/41 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 76 HTVRSLDRALEEAGNSGILSLSGRKLRDFPGSG--YDLTDT 114
>gi|194228216|ref|XP_001915811.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 2 [Equus caballus]
Length = 764
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 32/41 (78%), Gaps = 2/41 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 75 HTVRSLDRALEEAGNSGILSLSGRKLRDFPGSG--YDLTDT 113
>gi|410915660|ref|XP_003971305.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2-like [Takifugu rubripes]
Length = 694
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 12 QSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
Q Q H ARSL+R+LE+A SG LNLSGRKL+++P G YDL+D+
Sbjct: 33 QHQPHTARSLDRVLEDAVSSGILNLSGRKLREYP--GLSYDLTDTT 76
>gi|358420729|ref|XP_003584714.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 [Bos taurus]
Length = 766
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 32/41 (78%), Gaps = 2/41 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 76 HTVRSLDRALEEAGNSGILSLSGRKLRDFPGSG--YDLTDT 114
>gi|449499344|ref|XP_002188455.2| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 [Taeniopygia guttata]
Length = 1099
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/43 (67%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 14 QVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
Q H RSLER LEEA SG L LSGRKL+DFP+SG DLSD+
Sbjct: 404 QSHTVRSLERALEEAGSSGILCLSGRKLRDFPSSG--CDLSDT 444
>gi|443687631|gb|ELT90549.1| hypothetical protein CAPTEDRAFT_82415, partial [Capitella teleta]
Length = 241
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 12 QSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVI 58
S L+R+LE++L++A +GE+ LSGRK+KDF KYDLSD+ I
Sbjct: 2 HSPTSLSRTLEKVLDDAEQTGEILLSGRKIKDFAKVSCKYDLSDATI 48
>gi|47227235|emb|CAG00597.1| unnamed protein product [Tetraodon nigroviridis]
Length = 478
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 2/45 (4%)
Query: 12 QSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
Q Q H ARSL+R+LE+A SG LNLSGRKL+++P G +DL+D+
Sbjct: 35 QQQPHTARSLDRVLEDAVSSGILNLSGRKLREYP--GLSFDLTDT 77
>gi|348524168|ref|XP_003449595.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1-like [Oreochromis
niloticus]
Length = 687
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIVVYFSRSGRKLKDFPN 74
R LER LEEA SG LNLS RKLK+FP + +DLSD+V S +L D P+
Sbjct: 32 RGLERALEEAAASGVLNLSCRKLKEFPRTAANHDLSDTVEA---DLSKNRLTDVPS 84
>gi|395859562|ref|XP_003802105.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2-like [Otolemur garnettii]
Length = 764
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP+SG YDL+D+
Sbjct: 72 HTVRSLDRALEEAGNSGILSLSGRKLRDFPSSG--YDLTDTT 111
>gi|432897551|ref|XP_004076454.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2-like [Oryzias latipes]
Length = 722
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H ARSLER LE+A SG LNLSGRKL+++P G YDL+D+
Sbjct: 41 HTARSLERALEDAVCSGILNLSGRKLREYP--GTNYDLTDTT 80
>gi|62858497|ref|NP_001016380.1| leucine-rich repeats and calponin homology (CH) domain containing 2
[Xenopus (Silurana) tropicalis]
gi|89270942|emb|CAJ82074.1| leucine-rich repeats and calponin homology (CH) domain containing 1
[Xenopus (Silurana) tropicalis]
gi|213625641|gb|AAI71029.1| hypothetical protein LOC549134 [Xenopus (Silurana) tropicalis]
Length = 748
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 2/41 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
H ARSL+R LEEA +G L+LSGRKL+DFP +G YDL+D+
Sbjct: 62 HTARSLDRALEEAVNTGILSLSGRKLRDFPGTG--YDLTDT 100
>gi|332226190|ref|XP_003262271.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 isoform 2 [Nomascus
leucogenys]
Length = 747
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 75 HTVRSLDRALEEAGSSGILSLSGRKLRDFPGSG--YDLTDTT 114
>gi|449484488|ref|XP_004175133.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 1 [Taeniopygia
guttata]
Length = 747
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGG--KYDLSDSV 57
L R LER LEEA SG LNLSGRKLK+FP S +DLSD+V
Sbjct: 36 LNRGLERALEEAAHSGGLNLSGRKLKEFPRSAAALSHDLSDTV 78
>gi|332226188|ref|XP_003262270.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 isoform 1 [Nomascus
leucogenys]
Length = 764
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 75 HTVRSLDRALEEAGSSGILSLSGRKLRDFPGSG--YDLTDTT 114
>gi|359081830|ref|XP_003588190.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 [Bos taurus]
gi|296470906|tpg|DAA13021.1| TPA: leucine-rich repeats and calponin homology (CH) domain
containing 2 [Bos taurus]
Length = 453
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 76 HTVRSLDRALEEAGNSGILSLSGRKLRDFPGSG--YDLTDTT 115
>gi|345478711|ref|NP_001230892.1| leucine-rich repeat and calponin homology domain-containing protein
2 isoform 2 [Homo sapiens]
Length = 748
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 75 HTVRSLDRALEEAGSSGILSLSGRKLRDFPGSG--YDLTDTT 114
>gi|115527767|gb|AAI25225.1| LRCH2 protein [Homo sapiens]
Length = 748
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 75 HTVRSLDRALEEAGSSGILSLSGRKLRDFPGSG--YDLTDTT 114
>gi|301611237|ref|XP_002935158.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 1-like [Xenopus
(Silurana) tropicalis]
Length = 731
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
Query: 4 LTNMNLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
+TN +L ++ + R LER LEEA SG LN+S RKLK+FP + G DLSD+V
Sbjct: 32 VTNFSL----KLPVNRGLERALEEAASSGVLNVSARKLKEFPRTSGSPDLSDTV 81
>gi|154091020|ref|NP_065922.3| leucine-rich repeat and calponin homology domain-containing protein
2 isoform 1 [Homo sapiens]
gi|116248529|sp|Q5VUJ6.2|LRCH2_HUMAN RecName: Full=Leucine-rich repeat and calponin homology
domain-containing protein 2
gi|306921671|dbj|BAJ17915.1| leucine-rich repeats and calponin homology (CH) domain containing 2
[synthetic construct]
Length = 765
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 75 HTVRSLDRALEEAGSSGILSLSGRKLRDFPGSG--YDLTDTT 114
>gi|426397151|ref|XP_004064789.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 isoform 2 [Gorilla gorilla
gorilla]
Length = 748
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 75 HTVRSLDRALEEAGSSGILSLSGRKLRDFPGSG--YDLTDTT 114
>gi|397467530|ref|XP_003805465.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 2 [Pan paniscus]
Length = 765
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 75 HTVRSLDRALEEAGSSGILSLSGRKLRDFPGSG--YDLTDTT 114
>gi|426397149|ref|XP_004064788.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 isoform 1 [Gorilla gorilla
gorilla]
Length = 765
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 75 HTVRSLDRALEEAGSSGILSLSGRKLRDFPGSG--YDLTDTT 114
>gi|440899185|gb|ELR50528.1| Leucine-rich repeat and calponin-like protein domain-containing
protein 2 [Bos grunniens mutus]
Length = 764
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 74 HTVRSLDRALEEAGNSGILSLSGRKLRDFPGSG--YDLTDTT 113
>gi|74008142|ref|XP_549199.2| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 isoform 1 [Canis lupus
familiaris]
Length = 765
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 75 HTVRSLDRALEEAGNSGILSLSGRKLRDFPGSG--YDLTDTT 114
>gi|410989220|ref|XP_004000861.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 isoform 1 [Felis catus]
Length = 766
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 76 HTVRSLDRALEEAGNSGILSLSGRKLRDFPGSG--YDLTDTT 115
>gi|363729470|ref|XP_417050.3| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 [Gallus gallus]
Length = 740
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGG--KYDLSDSV 57
L R LER LEEA SG LNLSGRKLK+FP S +DLSD+V
Sbjct: 39 LNRGLERALEEAAHSGGLNLSGRKLKEFPRSASALTHDLSDTV 81
>gi|326914157|ref|XP_003203394.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1-like [Meleagris gallopavo]
Length = 741
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGG--KYDLSDSV 57
L R LER LEEA SG LNLSGRKLK+FP S +DLSD+V
Sbjct: 26 LNRGLERALEEAAHSGGLNLSGRKLKEFPRSASALTHDLSDTV 68
>gi|291407824|ref|XP_002720249.1| PREDICTED: leucine-rich repeats and calponin homology (CH) domain
containing 2 [Oryctolagus cuniculus]
Length = 874
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 184 HTVRSLDRALEEAGNSGILSLSGRKLRDFPGSG--YDLTDTT 223
>gi|432931615|ref|XP_004081701.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1-like [Oryzias latipes]
Length = 668
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIVVYFSRSGRKLKDFPN 74
R LER LEEA SG LNLS RK+K+FP + +DLSD+V S +L D P+
Sbjct: 35 RGLERALEEAAASGVLNLSCRKMKEFPRTAANHDLSDTVEA---DLSKNRLADVPS 87
>gi|326675903|ref|XP_003200463.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 [Danio rerio]
Length = 728
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
RSL+R L+EA +G LNLSGRKLK+FP S +DL+D+
Sbjct: 46 RSLDRALDEAAATGGLNLSGRKLKEFPRSAAGHDLTDT 83
>gi|431918362|gb|ELK17587.1| Leucine-rich repeat and calponin like proteiny domain-containing
protein 3 [Pteropus alecto]
Length = 772
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 15 VHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
V +RSL+R LEEA ++G L+LSGRKL++FP + +DL+D+
Sbjct: 43 VSWSRSLDRALEEAAVTGVLSLSGRKLREFPRAAANHDLTDT 84
>gi|392343421|ref|XP_003754883.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2-like [Rattus norvegicus]
gi|392355963|ref|XP_001057911.2| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2-like [Rattus norvegicus]
Length = 772
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 2/41 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
H RSL+R LEEA SG L+LSGRKL++FP SG YDL+D+
Sbjct: 83 HTVRSLDRALEEAGNSGILSLSGRKLREFPGSG--YDLTDT 121
>gi|47216492|emb|CAG02143.1| unnamed protein product [Tetraodon nigroviridis]
Length = 786
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 1 MAVLTNMNLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+ V +N L S RS++R L+EA +G LNLSGRKLK+FP S +DL+D+
Sbjct: 31 LLVGSNNGLGSVGPAPWNRSVDRALDEATATGCLNLSGRKLKEFPRSAANHDLTDT 86
>gi|432953856|ref|XP_004085450.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3-like [Oryzias latipes]
Length = 698
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
RS++R L+EA ++G LNLSGRKLK+FP S +DL+D+
Sbjct: 46 RSVDRALDEASVTGCLNLSGRKLKEFPRSSNNHDLTDT 83
>gi|156230187|gb|AAI51991.1| Zgc:171915 protein [Danio rerio]
Length = 295
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
RSL+R L+EA +G LNLSGRKLK+FP S +DL+D+
Sbjct: 46 RSLDRALDEAAATGGLNLSGRKLKEFPRSAAGHDLTDTT 84
>gi|395519165|ref|XP_003763721.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 [Sarcophilus harrisii]
Length = 535
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 44 SRSLDRALEEAAVTGTLSLSGRKLREFPRGAANHDLTDT 82
>gi|126325785|ref|XP_001364043.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 [Monodelphis domestica]
Length = 768
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 42 SRSLDRALEEAAVTGTLSLSGRKLREFPRGAANHDLTDT 80
>gi|395862551|ref|XP_003803507.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 [Otolemur garnettii]
Length = 721
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
RSL+R LEEA ++G L+LSGRKL++FP +DL+D++
Sbjct: 47 RSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDTI 85
>gi|403289475|ref|XP_003935882.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 767
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP G YDL+D+
Sbjct: 77 HTVRSLDRALEEAGNSGILSLSGRKLRDFP--GSSYDLTDTT 116
>gi|296236211|ref|XP_002763218.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 isoform 1 [Callithrix
jacchus]
Length = 765
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP G YDL+D+
Sbjct: 75 HTVRSLDRALEEAGNSGILSLSGRKLRDFP--GSSYDLTDTT 114
>gi|395734631|ref|XP_002814522.2| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 [Pongo abelii]
Length = 803
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEASVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|380805337|gb|AFE74544.1| leucine-rich repeat and calponin homology domain-containing
protein 2 isoform 1, partial [Macaca mulatta]
Length = 160
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 8 NLTSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
N S H RSL+R LEEA SG L+L GRKL+DFP SG YDL+D+
Sbjct: 19 NPGSLQPQHTVRSLDRALEEAGNSGILSLGGRKLRDFPGSG--YDLTDTT 66
>gi|296236213|ref|XP_002763219.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 isoform 2 [Callithrix
jacchus]
Length = 748
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP G YDL+D+
Sbjct: 75 HTVRSLDRALEEAGNSGILSLSGRKLRDFP--GSSYDLTDTT 114
>gi|410037957|ref|XP_003950311.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 [Pan troglodytes]
Length = 725
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|403289477|ref|XP_003935883.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 750
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL+DFP G YDL+D+
Sbjct: 77 HTVRSLDRALEEAGNSGILSLSGRKLRDFP--GSSYDLTDTT 116
>gi|338716202|ref|XP_003363418.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 2 [Equus caballus]
Length = 620
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|338716200|ref|XP_001501537.2| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 1 [Equus caballus]
Length = 722
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|296228479|ref|XP_002759825.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 3 [Callithrix
jacchus]
Length = 620
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|194390852|dbj|BAG62185.1| unnamed protein product [Homo sapiens]
Length = 623
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|194382758|dbj|BAG64549.1| unnamed protein product [Homo sapiens]
Length = 725
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|116248531|sp|Q96II8.2|LRCH3_HUMAN RecName: Full=Leucine-rich repeat and calponin homology
domain-containing protein 3; Flags: Precursor
gi|119612651|gb|EAW92245.1| leucine-rich repeats and calponin homology (CH) domain containing
3, isoform CRA_d [Homo sapiens]
Length = 777
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|335300203|ref|XP_003358823.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 2 [Sus scrofa]
Length = 620
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|194374545|dbj|BAG57168.1| unnamed protein product [Homo sapiens]
Length = 803
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|119612650|gb|EAW92244.1| leucine-rich repeats and calponin homology (CH) domain containing
3, isoform CRA_c [Homo sapiens]
Length = 803
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|114591372|ref|XP_001167178.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 9 [Pan troglodytes]
gi|397469717|ref|XP_003806491.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 3 [Pan paniscus]
Length = 803
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|426217614|ref|XP_004003048.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 2 [Ovis aries]
Length = 621
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|119612649|gb|EAW92243.1| leucine-rich repeats and calponin homology (CH) domain containing
3, isoform CRA_b [Homo sapiens]
Length = 767
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|296228477|ref|XP_002759824.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 2 [Callithrix
jacchus]
Length = 722
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|426217612|ref|XP_004003047.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 1 [Ovis aries]
Length = 723
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|335300201|ref|XP_003132664.2| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 1 [Sus scrofa]
Length = 722
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|344282193|ref|XP_003412859.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 [Loxodonta africana]
Length = 738
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|296228475|ref|XP_002759823.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 1 [Callithrix
jacchus]
Length = 774
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|410221262|gb|JAA07850.1| leucine-rich repeats and calponin homology (CH) domain containing
3 [Pan troglodytes]
Length = 712
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|14249428|ref|NP_116162.1| leucine-rich repeat and calponin homology domain-containing
protein 3 precursor [Homo sapiens]
gi|13960126|gb|AAH07504.1| Leucine-rich repeats and calponin homology (CH) domain containing
3 [Homo sapiens]
gi|119612648|gb|EAW92242.1| leucine-rich repeats and calponin homology (CH) domain containing
3, isoform CRA_a [Homo sapiens]
gi|123993185|gb|ABM84194.1| leucine-rich repeats and calponin homology (CH) domain containing
3 [synthetic construct]
gi|124000177|gb|ABM87597.1| leucine-rich repeats and calponin homology (CH) domain containing
3 [synthetic construct]
Length = 712
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|297470947|ref|XP_002684845.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 1 [Bos taurus]
gi|296491401|tpg|DAA33464.1| TPA: leucine-rich repeats and calponin homology (CH) domain
containing 3 [Bos taurus]
Length = 773
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|402912321|ref|XP_003918717.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 [Papio anubis]
Length = 800
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|359062446|ref|XP_003585701.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 2 [Bos taurus]
Length = 740
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|74201377|dbj|BAE26133.1| unnamed protein product [Mus musculus]
Length = 409
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL++FP SG YDL+D+
Sbjct: 36 HTVRSLDRALEEAGNSGILSLSGRKLREFPGSG--YDLTDTT 75
>gi|348582798|ref|XP_003477163.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3-like isoform 1 [Cavia
porcellus]
Length = 772
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAAHHDLTDT 84
>gi|348582800|ref|XP_003477164.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3-like isoform 2 [Cavia
porcellus]
Length = 736
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAAHHDLTDT 84
>gi|291400497|ref|XP_002716586.1| PREDICTED: leucine-rich repeats and calponin homology (CH) domain
containing 3 [Oryctolagus cuniculus]
Length = 776
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|124487175|ref|NP_001074642.1| leucine-rich repeat and calponin homology domain-containing protein
2 [Mus musculus]
gi|116248530|sp|Q3UMG5.2|LRCH2_MOUSE RecName: Full=Leucine-rich repeat and calponin homology
domain-containing protein 2
Length = 773
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL++FP SG YDL+D+
Sbjct: 83 HTVRSLDRALEEAGNSGILSLSGRKLREFPGSG--YDLTDTT 122
>gi|344286308|ref|XP_003414901.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2 [Loxodonta africana]
Length = 765
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+LSGRKL++FP SG YDL+D+
Sbjct: 75 HTVRSLDRALEEAGNSGILSLSGRKLREFPGSG--YDLTDTT 114
>gi|449509924|ref|XP_002190674.2| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 [Taeniopygia guttata]
Length = 750
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPN-SGGKYDLSDS 56
+RSL+R LEEA +SG L+LSGRKL+D+P S +DLSD+
Sbjct: 28 SRSLDRALEEAAVSGTLSLSGRKLRDYPRASAANHDLSDT 67
>gi|358410230|ref|XP_001254205.3| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 [Bos taurus]
Length = 688
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|355705086|gb|EHH31011.1| Leucine-rich repeat and calponin-like proteiny domain-containing
protein 2, partial [Macaca mulatta]
Length = 650
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+L GRKL+DFP SG YDL+D+
Sbjct: 24 HTVRSLDRALEEAGNSGILSLGGRKLRDFPGSG--YDLTDTT 63
>gi|332265787|ref|XP_003281896.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 [Nomascus leucogenys]
Length = 777
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|410970631|ref|XP_003991781.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 3 [Felis catus]
Length = 687
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|410970627|ref|XP_003991779.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 1 [Felis catus]
Length = 773
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|327284578|ref|XP_003227014.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3-like [Anolis carolinensis]
Length = 878
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFP-NSGGKYDLSDS 56
RSLER LEEA SG L LSGRKL++FP NS +DL+D+
Sbjct: 53 RSLERALEEAASSGALGLSGRKLREFPRNSAAPHDLADT 91
>gi|297304607|ref|XP_002806405.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2-like [Macaca mulatta]
Length = 751
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+L GRKL+DFP SG YDL+D+
Sbjct: 78 HTVRSLDRALEEAGNSGILSLGGRKLRDFPGSG--YDLTDTT 117
>gi|410970629|ref|XP_003991780.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 2 [Felis catus]
Length = 737
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|109131969|ref|XP_001102903.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2-like isoform 2 [Macaca
mulatta]
Length = 768
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+L GRKL+DFP SG YDL+D+
Sbjct: 78 HTVRSLDRALEEAGNSGILSLGGRKLRDFPGSG--YDLTDTT 117
>gi|301762778|ref|XP_002916811.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3-like [Ailuropoda
melanoleuca]
Length = 773
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 47 RSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|355757635|gb|EHH61160.1| Leucine-rich repeat and calponin-like proteiny domain-containing
protein 2, partial [Macaca fascicularis]
Length = 700
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
H RSL+R LEEA SG L+L GRKL+DFP SG YDL+D+
Sbjct: 10 HTVRSLDRALEEAGNSGILSLGGRKLRDFPGSG--YDLTDTT 49
>gi|281338682|gb|EFB14266.1| hypothetical protein PANDA_004916 [Ailuropoda melanoleuca]
Length = 709
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
RSL+R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 47 RSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|4589682|dbj|BAA76860.1| KIAA1016 protein [Homo sapiens]
Length = 793
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 124 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 165
>gi|197927118|ref|NP_001128199.1| leucine-rich repeat and calponin homology domain-containing
protein 1 [Rattus norvegicus]
gi|183985874|gb|AAI66585.1| Lrch1 protein [Rattus norvegicus]
Length = 677
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 43 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 84
>gi|149049959|gb|EDM02283.1| similar to Leucine-rich repeats and calponin homology
domain-containing protein 1 (Calponin homology
domain-containing protein 1) [Rattus norvegicus]
Length = 675
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 43 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 84
>gi|431902369|gb|ELK08870.1| Leucine-rich repeat and calponin like proteiny domain-containing
protein 1 [Pteropus alecto]
Length = 851
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 178 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 219
>gi|296189309|ref|XP_002742726.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 3 [Callithrix
jacchus]
Length = 696
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 59 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 100
>gi|33859670|ref|NP_055931.1| leucine-rich repeat and calponin homology domain-containing protein
1 isoform 2 [Homo sapiens]
gi|33126250|gb|AAK95568.1| neuronal protein isoform B [Homo sapiens]
gi|168278789|dbj|BAG11274.1| leucine-rich repeat and calponin homology domain-containing protein
1 [synthetic construct]
Length = 728
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 59 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 100
>gi|351712441|gb|EHB15360.1| Leucine-rich repeat and calponin-like protein domain-containing
protein 1 [Heterocephalus glaber]
Length = 762
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 58 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 99
>gi|256017180|ref|NP_001157685.1| leucine-rich repeat and calponin homology domain-containing protein
1 isoform 3 [Homo sapiens]
gi|33126227|gb|AAK95567.1| neuronal protein isoform a [Homo sapiens]
gi|86577736|gb|AAI12938.1| LRCH1 protein [Homo sapiens]
Length = 696
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 59 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 100
>gi|397480373|ref|XP_003811459.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 2 [Pan paniscus]
Length = 726
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 57 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 98
>gi|387541526|gb|AFJ71390.1| leucine-rich repeat and calponin homology domain-containing protein
1 isoform 3 [Macaca mulatta]
Length = 701
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 64 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 105
>gi|332841267|ref|XP_003314184.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 3 [Pan troglodytes]
Length = 726
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 57 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 98
>gi|296439310|sp|Q9Y2L9.3|LRCH1_HUMAN RecName: Full=Leucine-rich repeat and calponin homology
domain-containing protein 1; AltName: Full=Calponin
homology domain-containing protein 1; AltName:
Full=Neuronal protein 81; Short=NP81
Length = 728
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 59 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 100
>gi|158259257|dbj|BAF85587.1| unnamed protein product [Homo sapiens]
Length = 696
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 59 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 100
>gi|148665407|gb|EDK97823.1| mCG130130, isoform CRA_c [Mus musculus]
Length = 728
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RS++R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSVDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|124486939|ref|NP_001074724.1| leucine-rich repeat and calponin homology domain-containing
protein 3 precursor [Mus musculus]
gi|341941018|sp|Q8BVU0.3|LRCH3_MOUSE RecName: Full=Leucine-rich repeat and calponin homology
domain-containing protein 3; Flags: Precursor
gi|148665405|gb|EDK97821.1| mCG130130, isoform CRA_a [Mus musculus]
gi|187957740|gb|AAI51059.1| Leucine-rich repeats and calponin homology (CH) domain containing
3 [Mus musculus]
Length = 778
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RS++R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSVDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|187957426|gb|AAI57925.1| Lrch3 protein [Mus musculus]
Length = 742
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RS++R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSVDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|332841263|ref|XP_003314182.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 1 [Pan troglodytes]
Length = 694
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 57 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 98
>gi|297460237|ref|XP_581598.5| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 [Bos taurus]
Length = 773
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGG-KYDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 69 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPAHDLSDTV 110
>gi|397480371|ref|XP_003811458.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 1 [Pan paniscus]
gi|410353799|gb|JAA43503.1| leucine-rich repeats and calponin homology (CH) domain containing
1 [Pan troglodytes]
Length = 694
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 57 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 98
>gi|338715482|ref|XP_003363275.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 3 [Equus caballus]
Length = 696
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 58 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 99
>gi|219521527|gb|AAI43884.1| LRCH1 protein [Homo sapiens]
Length = 763
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 59 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 100
>gi|194221898|ref|XP_001915067.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 1 [Equus caballus]
Length = 728
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 58 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 99
>gi|256017174|ref|NP_001157683.1| leucine-rich repeat and calponin homology domain-containing protein
1 isoform 1 [Homo sapiens]
gi|109659120|gb|AAI17473.1| LRCH1 protein [Homo sapiens]
gi|313883716|gb|ADR83344.1| leucine-rich repeats and calponin homology (CH) domain containing 1
[synthetic construct]
Length = 763
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 59 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 100
>gi|397480375|ref|XP_003811460.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 3 [Pan paniscus]
Length = 761
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 57 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 98
>gi|332841265|ref|XP_003314183.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 2 [Pan troglodytes]
Length = 761
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 57 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 98
>gi|219521428|gb|AAI72144.1| Lrch3 protein [Mus musculus]
Length = 692
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RS++R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSVDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|149060669|gb|EDM11383.1| leucine-rich repeats and calponin homology (CH) domain containing
3 (predicted), isoform CRA_b [Rattus norvegicus]
Length = 719
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RS++R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 42 SRSVDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 80
>gi|148665406|gb|EDK97822.1| mCG130130, isoform CRA_b [Mus musculus]
Length = 530
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RS++R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSVDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|392352101|ref|XP_003751111.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 1 [Rattus
norvegicus]
Length = 769
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RS++R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 42 SRSVDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 80
>gi|392332344|ref|XP_003752549.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 3 [Rattus
norvegicus]
Length = 683
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RS++R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 42 SRSVDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 80
>gi|26345458|dbj|BAC36380.1| unnamed protein product [Mus musculus]
Length = 382
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RS++R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 46 SRSVDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 84
>gi|338715480|ref|XP_003363274.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 2 [Equus caballus]
Length = 763
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 58 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 99
>gi|392352103|ref|XP_003751112.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 2 [Rattus
norvegicus]
Length = 733
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RS++R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 42 SRSVDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 80
>gi|392332340|ref|XP_003752547.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 1 [Rattus
norvegicus]
gi|149060668|gb|EDM11382.1| leucine-rich repeats and calponin homology (CH) domain containing
3 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 769
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RS++R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 42 SRSVDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 80
>gi|392332342|ref|XP_003752548.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 isoform 2 [Rattus
norvegicus]
Length = 733
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RS++R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 42 SRSVDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 80
>gi|395862327|ref|XP_003803408.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 1 [Otolemur
garnettii]
Length = 696
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 60 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 101
>gi|403303262|ref|XP_003942257.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 730
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 61 LNRGLERALEEAVNSGGLNLSARKLKEFPRTAAPGHDLSDTV 102
>gi|395862329|ref|XP_003803409.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 2 [Otolemur
garnettii]
Length = 763
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 60 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 101
>gi|417412080|gb|JAA52455.1| Putative leucine-rich repeat lrr protein, partial [Desmodus
rotundus]
Length = 640
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 1 LNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTV 42
>gi|403303260|ref|XP_003942256.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 698
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 61 LNRGLERALEEAVNSGGLNLSARKLKEFPRTAAPGHDLSDTV 102
>gi|149060670|gb|EDM11384.1| leucine-rich repeats and calponin homology (CH) domain containing
3 (predicted), isoform CRA_c [Rattus norvegicus]
Length = 526
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
+RS++R LEEA ++G L+LSGRKL++FP +DL+D+
Sbjct: 42 SRSVDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDT 80
>gi|403303264|ref|XP_003942258.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 765
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 61 LNRGLERALEEAVNSGGLNLSARKLKEFPRTAAPGHDLSDTV 102
>gi|148703891|gb|EDL35838.1| mCG121291, isoform CRA_a [Mus musculus]
Length = 796
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 165 LNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTV 206
>gi|326669641|ref|XP_003199055.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4 [Danio rerio]
Length = 709
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 13 SQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSD 55
+ V +RS+E+ LEEA SG L LS RKLK+FP + YDLSD
Sbjct: 11 ATVAASRSVEKALEEAASSGALILSNRKLKEFPRTARNYDLSD 53
>gi|326669637|ref|XP_003199053.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4-like [Danio rerio]
Length = 709
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 13 SQVHLARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSD 55
+ V +RS+E+ LEEA SG L LS RKLK+FP + YDLSD
Sbjct: 11 ATVAASRSVEKALEEAASSGALILSNRKLKEFPRTARNYDLSD 53
>gi|37360192|dbj|BAC98074.1| mKIAA1016 protein [Mus musculus]
Length = 777
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 117 LNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTV 158
>gi|356460937|ref|NP_001239061.1| leucine-rich repeat and calponin homology domain-containing
protein 1 isoform 2 [Mus musculus]
Length = 682
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 49 LNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTV 90
>gi|90991704|ref|NP_001028611.2| leucine-rich repeat and calponin homology domain-containing
protein 1 isoform 1 [Mus musculus]
gi|341940911|sp|P62046.2|LRCH1_MOUSE RecName: Full=Leucine-rich repeat and calponin homology
domain-containing protein 1; AltName: Full=Calponin
homology domain-containing protein 1
Length = 709
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 49 LNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTV 90
>gi|55731334|emb|CAH92381.1| hypothetical protein [Pongo abelii]
Length = 729
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS R+LK+FP + +DLSD+V
Sbjct: 92 LNRGLERALEEAANSGGLNLSARRLKEFPRTAAPGHDLSDTV 133
>gi|74180769|dbj|BAE25596.1| unnamed protein product [Mus musculus]
Length = 754
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 121 LNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTV 162
>gi|148703892|gb|EDL35839.1| mCG121291, isoform CRA_b [Mus musculus]
Length = 481
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 117 LNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTV 158
>gi|312093478|ref|XP_003147696.1| hypothetical protein LOAG_12134 [Loa loa]
Length = 164
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 10 TSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFP-NSGGKYDLSDSV 57
TS Q L RS++++ EEA LSG L L+GRKLK+FP + KY++SD +
Sbjct: 55 TSYQQQLLTRSVDKMFEEAELSGVLLLAGRKLKEFPAHLALKYEISDII 103
>gi|345325121|ref|XP_001514226.2| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 [Ornithorhynchus anatinus]
Length = 726
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPN-SGGKYDLSDSV 57
L R LER L+EA SG LNLS RKLK+FP S +DLSD+V
Sbjct: 26 LNRGLERALDEAANSGGLNLSARKLKEFPRPSAPAHDLSDTV 67
>gi|327284067|ref|XP_003226760.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 2-like [Anolis carolinensis]
Length = 794
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFP--NSGGKYDLSDSV 57
RSLE++LEEA SG L LS RKL+DFP SG DLSD+V
Sbjct: 105 RSLEKVLEEAASSGLLCLSARKLRDFPASASGAACDLSDTV 145
>gi|393904976|gb|EJD73843.1| hypothetical protein LOAG_18764 [Loa loa]
Length = 238
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 10 TSQSQVHLARSLERILEEAHLSGELNLSGRKLKDFP-NSGGKYDLSDSV 57
TS Q L RS++++ EEA LSG L L+GRKLK+FP + KY++SD +
Sbjct: 55 TSYQQQLLTRSVDKMFEEAELSGVLLLAGRKLKEFPAHLALKYEISDII 103
>gi|444720849|gb|ELW61617.1| Leucine-rich repeat and calponin homology domain-containing protein
3 [Tupaia chinensis]
Length = 575
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDS 56
ARSL+R EE ++G L+LSGRKL++FP +DL+D+
Sbjct: 77 ARSLDRAREEPAVTGVLSLSGRKLREFPRGAANHDLTDT 115
>gi|354499035|ref|XP_003511617.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1-like [Cricetulus griseus]
Length = 748
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +D SD+V
Sbjct: 87 LNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDASDTV 128
>gi|334330734|ref|XP_003341401.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 3 [Monodelphis
domestica]
Length = 702
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGG-KYDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 63 LNRGLERALEEAANSGVLNLSARKLKEFPRTVALGHDLSDTV 104
>gi|126327703|ref|XP_001379008.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 1 [Monodelphis
domestica]
Length = 734
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGG-KYDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 63 LNRGLERALEEAANSGVLNLSARKLKEFPRTVALGHDLSDTV 104
>gi|334330732|ref|XP_003341400.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 1 isoform 2 [Monodelphis
domestica]
Length = 769
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGG-KYDLSDSV 57
L R LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 63 LNRGLERALEEAANSGVLNLSARKLKEFPRTVALGHDLSDTV 104
>gi|297274415|ref|XP_002808190.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 1-like, partial
[Macaca mulatta]
Length = 897
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 17 LARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
L R LER LEE SG LNLS RKLK+FP + +DLSD+V
Sbjct: 135 LNRGLERALEEXANSGGLNLSXRKLKEFPRTAAPGHDLSDTV 176
>gi|426255382|ref|XP_004021328.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 4 [Ovis aries]
Length = 738
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 24 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 62
>gi|363737344|ref|XP_422732.3| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3 [Gallus gallus]
Length = 787
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKY 51
+RSL+R LEEA SG L+LSGRKL+D+P + G +
Sbjct: 37 SRSLDRALEEAAASGTLSLSGRKLRDYPRASGSH 70
>gi|348568448|ref|XP_003470010.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4-like isoform 2 [Cavia
porcellus]
Length = 655
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|351703894|gb|EHB06813.1| Leucine-rich repeat and calponin-like protein domain-containing
protein 4 [Heterocephalus glaber]
Length = 684
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|134085920|ref|NP_001076919.1| leucine-rich repeat and calponin homology domain-containing
protein 4 [Bos taurus]
gi|126920885|gb|AAI33496.1| LRCH4 protein [Bos taurus]
Length = 658
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|348568446|ref|XP_003470009.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4-like isoform 1 [Cavia
porcellus]
Length = 686
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|296472968|tpg|DAA15083.1| TPA: leucine-rich repeats and calponin homology (CH) domain
containing 4 [Bos taurus]
Length = 658
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|380798521|gb|AFE71136.1| leucine-rich repeat and calponin homology domain-containing
protein 1 isoform 3, partial [Macaca mulatta]
Length = 634
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 21 LERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 1 LERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 38
>gi|380798139|gb|AFE70945.1| leucine-rich repeat and calponin homology domain-containing
protein 1 isoform 2, partial [Macaca mulatta]
Length = 666
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 21 LERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSDSV 57
LER LEEA SG LNLS RKLK+FP + +DLSD+V
Sbjct: 1 LERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 38
>gi|432101309|gb|ELK29535.1| Leucine-rich repeat and calponin like proteiny domain-containing
protein 4 [Myotis davidii]
Length = 715
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 59 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 97
>gi|397483534|ref|XP_003812956.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 4 [Pan paniscus]
Length = 832
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 32 RSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|119596925|gb|EAW76519.1| leucine-rich repeats and calponin homology (CH) domain containing
4, isoform CRA_a [Homo sapiens]
Length = 832
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 32 RSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|395852751|ref|XP_003798895.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4 [Otolemur garnettii]
Length = 660
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|291390934|ref|XP_002711962.1| PREDICTED: leucine-rich repeats and calponin homology (CH) domain
containing 4 [Oryctolagus cuniculus]
Length = 685
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|440908170|gb|ELR58218.1| Leucine-rich repeat and calponin-like protein domain-containing
protein 4, partial [Bos grunniens mutus]
Length = 668
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 10 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 48
>gi|355763383|gb|EHH62153.1| hypothetical protein EGM_20391 [Macaca fascicularis]
Length = 683
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|148687303|gb|EDL19250.1| leucine-rich repeats and calponin homology (CH) domain containing
4, isoform CRA_b [Mus musculus]
Length = 517
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|359319638|ref|XP_546954.4| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 4 [Canis lupus
familiaris]
Length = 690
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|274325486|ref|NP_001162123.1| leucine-rich repeat and calponin homology domain-containing
protein 4 isoform 2 [Mus musculus]
Length = 649
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|355560508|gb|EHH17194.1| hypothetical protein EGK_13532 [Macaca mulatta]
gi|380789599|gb|AFE66675.1| leucine-rich repeat and calponin homology domain-containing
protein 4 [Macaca mulatta]
gi|383418357|gb|AFH32392.1| leucine-rich repeat and calponin homology domain-containing
protein 4 [Macaca mulatta]
Length = 683
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|26353314|dbj|BAC40287.1| unnamed protein product [Mus musculus]
Length = 649
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|148687302|gb|EDL19249.1| leucine-rich repeats and calponin homology (CH) domain containing
4, isoform CRA_a [Mus musculus]
Length = 527
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 41 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 79
>gi|444715616|gb|ELW56481.1| Leucine-rich repeat and calponin homology domain-containing
protein 4, partial [Tupaia chinensis]
Length = 659
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 29 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 67
>gi|402912833|ref|XP_003918944.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4 [Papio anubis]
Length = 683
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|354497135|ref|XP_003510677.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4 isoform 1 [Cricetulus
griseus]
Length = 651
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|194218843|ref|XP_001915770.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 4 [Equus caballus]
Length = 687
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|189011628|ref|NP_001121023.1| leucine-rich repeat and calponin homology domain-containing
protein 4 [Rattus norvegicus]
gi|187469041|gb|AAI66781.1| Lrch4 protein [Rattus norvegicus]
Length = 686
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|149062925|gb|EDM13248.1| rCG21252 [Rattus norvegicus]
Length = 682
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|431898235|gb|ELK06930.1| Leucine-rich repeat and calponin like proteiny domain-containing
protein 4 [Pteropus alecto]
Length = 624
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|22122701|ref|NP_666276.1| leucine-rich repeat and calponin homology domain-containing
protein 4 isoform 1 [Mus musculus]
gi|49036090|sp|Q921G6.1|LRCH4_MOUSE RecName: Full=Leucine-rich repeat and calponin homology
domain-containing protein 4
gi|15214784|gb|AAH12525.1| Leucine-rich repeats and calponin homology (CH) domain containing
4 [Mus musculus]
Length = 680
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|334323219|ref|XP_003340362.1| PREDICTED: hypothetical protein LOC100018577 [Monodelphis
domestica]
Length = 519
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFP-NSGGKYDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKQFPRGTASGYDLSD 69
>gi|119596926|gb|EAW76520.1| leucine-rich repeats and calponin homology (CH) domain containing
4, isoform CRA_b [Homo sapiens]
Length = 652
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 32 RSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|344250214|gb|EGW06318.1| Leucine-rich repeat and calponin-likey domain-containing protein
4 [Cricetulus griseus]
Length = 253
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|354497137|ref|XP_003510678.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4 isoform 2 [Cricetulus
griseus]
Length = 682
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|332867418|ref|XP_003318699.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4 [Pan troglodytes]
gi|410250662|gb|JAA13298.1| leucine-rich repeats and calponin homology (CH) domain containing
4 [Pan troglodytes]
gi|410288652|gb|JAA22926.1| leucine-rich repeats and calponin homology (CH) domain containing
4 [Pan troglodytes]
gi|410349531|gb|JAA41369.1| leucine-rich repeats and calponin homology (CH) domain containing
4 [Pan troglodytes]
Length = 683
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 32 RSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|30181233|ref|NP_002310.2| leucine-rich repeat and calponin homology domain-containing
protein 4 [Homo sapiens]
gi|49035987|sp|O75427.2|LRCH4_HUMAN RecName: Full=Leucine-rich repeat and calponin homology
domain-containing protein 4; AltName: Full=Leucine-rich
repeat neuronal protein 4; Short=Leucine-rich neuronal
protein
gi|31455249|gb|AAH18529.3| Leucine-rich repeats and calponin homology (CH) domain containing
4 [Homo sapiens]
gi|51094576|gb|EAL23828.1| leucine-rich repeats and calponin homology (CH) domain containing
4 [Homo sapiens]
gi|123993779|gb|ABM84491.1| leucine-rich repeats and calponin homology (CH) domain containing
4 [synthetic construct]
gi|123995129|gb|ABM85166.1| leucine-rich repeats and calponin homology (CH) domain containing
4 [synthetic construct]
gi|261860354|dbj|BAI46699.1| leucine-rich repeats and calponin homology (CH) domain containing
4 [synthetic construct]
Length = 683
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 32 RSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|47847490|dbj|BAD21417.1| mFLJ00248 protein [Mus musculus]
Length = 491
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 35 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 73
>gi|426357255|ref|XP_004045960.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4 [Gorilla gorilla gorilla]
Length = 678
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 32 RSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|403285865|ref|XP_003934231.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 4 [Saimiri
boliviensis boliviensis]
Length = 835
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+R+ ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRTAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|390459057|ref|XP_002744044.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 4 [Callithrix
jacchus]
Length = 841
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+R+ ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRTAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|112419367|gb|AAI21991.1| lrch4 protein [Xenopus (Silurana) tropicalis]
Length = 717
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSD 55
RS E+ LEEA +G L+LSGR++K+ P S YDL+D
Sbjct: 37 RSAEKALEEAASTGVLSLSGRRMKELPRSARNYDLTD 73
>gi|395533651|ref|XP_003768869.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4 [Sarcophilus harrisii]
Length = 675
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFP-NSGGKYDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKQFPRGTASGYDLSD 69
>gi|355699737|gb|AES01222.1| leucine-rich repeats and calponin-like proteiny domain containing
4 [Mustela putorius furo]
Length = 336
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 29 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 67
>gi|410984434|ref|XP_003998533.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 4 [Felis catus]
Length = 689
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKYFPRGAARSYDLSD 69
>gi|194379508|dbj|BAG63720.1| unnamed protein product [Homo sapiens]
Length = 363
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 32 RSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|193786688|dbj|BAG52011.1| unnamed protein product [Homo sapiens]
Length = 378
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 32 RSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|3135309|gb|AAC78793.1| leucin rich neuronal protein [Homo sapiens]
Length = 832
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
RS ER LE+A +G LNLS R+LK FP + YDLSD
Sbjct: 32 RSAERALEDAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|350581454|ref|XP_003481038.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4-like, partial [Sus scrofa]
Length = 328
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 18 ARSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
+RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 31 SRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|297680036|ref|XP_002817813.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 4-like [Pongo abelii]
Length = 221
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGK-YDLSD 55
RS ER LEEA +G LNLS R+LK FP + YDLSD
Sbjct: 32 RSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSD 69
>gi|432109412|gb|ELK33667.1| Leucine-rich repeat and calponin like proteiny domain-containing
protein 2, partial [Myotis davidii]
Length = 661
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
Query: 22 ERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
+R LEEA SG L+LSGRKL+DFP SG YDL+D+
Sbjct: 1 DRALEEAGSSGILSLSGRKLRDFPGSG--YDLTDTT 34
>gi|148682760|gb|EDL14707.1| mCG67317 [Mus musculus]
Length = 639
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%), Gaps = 2/37 (5%)
Query: 21 LERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSV 57
L+R LEEA SG L+LSGRKL++FP SG YDL+D+
Sbjct: 1 LDRALEEAGNSGILSLSGRKLREFPGSG--YDLTDTT 35
>gi|156382774|ref|XP_001632727.1| predicted protein [Nematostella vectensis]
gi|156219787|gb|EDO40664.1| predicted protein [Nematostella vectensis]
Length = 235
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIVVYFSRSGRKLKDFPNSGGK 78
+S ER EEA +G L L+G+ L+DFP+ +L D V+ S + DFP
Sbjct: 6 KSSERCFEEAEETGTLLLNGKGLRDFPDVADDCELID---VIEADLSKNRFTDFP----- 57
Query: 79 YDLSDSVIVVYFNI---TYPGLSMAIRKAQWL 107
++ D V++ N+ + L + + +WL
Sbjct: 58 VEICDFVMLEKLNLYHNSIRNLPDCLNRLKWL 89
>gi|301786835|ref|XP_002928832.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin
homology domain-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 767
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 16 HLARSLERILEEAHLSGELNLSGRKLKD----FPNSGGKYDLSDS 56
H RSL+R LEEA SG L+LSGRKL+D YDL+D+
Sbjct: 71 HTVRSLDRALEEAGNSGILSLSGRKLRDXXXXXXXXXSGYDLTDT 115
>gi|391334175|ref|XP_003741483.1| PREDICTED: leucine-rich repeat and calponin homology
domain-containing protein 3-like [Metaseiulus
occidentalis]
Length = 698
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNS-GGKYDLSDSVIVVYFSRSGRKLKDFP 73
RSLE+ LEEA G L L+GRKLK+ KYDLSD+++ S +L + P
Sbjct: 28 RSLEKTLEEAVSLGALRLNGRKLKEISAKLLQKYDLSDTIVA---DLSKNRLSELP 80
>gi|324504213|gb|ADY41819.1| Leucine-rich repeat and calponiny domain-containing protein 3
[Ascaris suum]
Length = 857
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 24 ILEEAHLSGELNLSGRKLKDFP-NSGGKYDLSDSVIVVYFSRSGRKLKDFP 73
+ EEA LSG L L+ RKLK+FP N KYD+SD V+ S ++ + P
Sbjct: 1 MFEEAELSGVLMLASRKLKEFPSNLAVKYDISD---VISADLSDNRMNELP 48
>gi|324504652|gb|ADY42008.1| Leucine-rich repeat and calponiny domain-containing protein 3
[Ascaris suum]
Length = 870
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 24 ILEEAHLSGELNLSGRKLKDFP-NSGGKYDLSDSVIVVYFSRSGRKLKDFP 73
+ EEA LSG L L+ RKLK+FP N KYD+SD V+ S ++ + P
Sbjct: 1 MFEEAELSGVLMLASRKLKEFPSNLAVKYDISD---VISADLSDNRMNELP 48
>gi|402583505|gb|EJW77449.1| hypothetical protein WUBG_11643 [Wuchereria bancrofti]
Length = 44
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 24 ILEEAHLSGELNLSGRKLKDFP-NSGGKYDLSDSV 57
+ EEA LSG L L+GRKLK+FP + KY++SD +
Sbjct: 1 MFEEAELSGVLLLAGRKLKEFPAHLALKYEISDII 35
>gi|340374272|ref|XP_003385662.1| PREDICTED: hypothetical protein LOC100641081 [Amphimedon
queenslandica]
Length = 853
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 19 RSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIVVYFSRSGRKLKDFP 73
R +++ EEA SG L++S RKL+ FPN G D+ D + + SG + FP
Sbjct: 8 RPIDKEFEEADYSGILDISARKLRLFPNIGD--DVYDPLEIFTAVVSGNRFDKFP 60
>gi|170576708|ref|XP_001893735.1| hypothetical protein Bm1_11330 [Brugia malayi]
gi|158600084|gb|EDP37428.1| hypothetical protein Bm1_11330 [Brugia malayi]
Length = 44
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 24 ILEEAHLSGELNLSGRKLKDFP-NSGGKYDLSDSV 57
+ EEA LSG L L+GRKLK+FP + KY++ D +
Sbjct: 1 MFEEAELSGVLLLAGRKLKEFPVHLAIKYEIXDII 35
>gi|198424544|ref|XP_002120028.1| PREDICTED: similar to Leucine-rich repeat and calponin homology
domain-containing protein 2 [Ciona intestinalis]
Length = 594
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 16 HL-ARSLERILEEAHLSGELNLSGRKLKDFPNSGGKYDLSDSVIVVYFSRSGRKLKDFP 73
HL ARS E+ILE+A SG L + R+LKD SG + L D+ ++ + +G L + P
Sbjct: 5 HLSARSNEKILEDAQFSGTLIATNRRLKDLDLSGEGHFLLDTCMLDF---TGNYLTEVP 60
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,711,716,643
Number of Sequences: 23463169
Number of extensions: 65640245
Number of successful extensions: 150730
Number of sequences better than 100.0: 252
Number of HSP's better than 100.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 150322
Number of HSP's gapped (non-prelim): 416
length of query: 109
length of database: 8,064,228,071
effective HSP length: 77
effective length of query: 32
effective length of database: 6,257,564,058
effective search space: 200242049856
effective search space used: 200242049856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)