Query psy18122
Match_columns 188
No_of_seqs 219 out of 1499
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 23:04:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18122.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18122hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gy5_A Angiopoietin-1 receptor 99.8 6.3E-19 2.2E-23 150.0 9.0 114 11-130 204-322 (423)
2 1klo_A Laminin; glycoprotein; 99.7 2.6E-18 8.9E-23 128.4 3.7 122 10-138 1-155 (162)
3 2ygq_A WIF-1, WNT inhibitory f 99.6 1.8E-16 6.2E-21 130.6 6.3 117 9-132 152-312 (324)
4 4d90_A EGF-like repeat and dis 99.5 1.9E-13 6.5E-18 99.4 10.4 110 6-129 2-134 (143)
5 2vj3_A Neurogenic locus notch 99.4 5.4E-13 1.8E-17 96.4 7.4 100 4-129 5-120 (135)
6 2gy5_A Angiopoietin-1 receptor 99.4 2E-13 6.8E-18 116.1 5.3 93 38-137 189-287 (423)
7 3fcs_B Integrin beta-3; beta p 99.4 2.3E-12 7.7E-17 115.2 10.6 106 15-128 452-600 (690)
8 3k6s_B Integrin beta-2; cell r 99.4 5.5E-13 1.9E-17 119.0 6.0 113 8-128 433-592 (687)
9 4aqs_A Laminin subunit beta-1; 99.2 1.8E-12 6E-17 113.0 2.8 103 21-128 407-525 (525)
10 2vj2_A Jagged-1; signalling, p 99.2 4.7E-12 1.6E-16 94.9 3.7 100 11-128 39-169 (169)
11 2p28_B Integrin beta-2; hybrid 99.2 1.3E-11 4.6E-16 95.9 4.4 107 8-128 94-214 (217)
12 2ygq_A WIF-1, WNT inhibitory f 99.2 1.5E-11 5.2E-16 101.1 4.9 71 10-83 185-276 (324)
13 3fcs_B Integrin beta-3; beta p 99.2 6.6E-11 2.3E-15 105.8 8.8 103 10-127 493-627 (690)
14 1klo_A Laminin; glycoprotein; 99.1 2E-11 6.9E-16 90.9 2.2 86 9-96 55-158 (162)
15 3k6s_B Integrin beta-2; cell r 99.0 6.3E-10 2.2E-14 99.3 7.6 72 10-82 482-591 (687)
16 2bou_A EGF-like module contain 99.0 5.8E-10 2E-14 81.0 5.9 118 7-132 4-138 (143)
17 4fbr_A Lectin, myxobacterial h 98.9 2.4E-12 8.2E-17 102.5 -9.6 116 11-129 39-203 (267)
18 4d90_A EGF-like repeat and dis 98.9 2E-09 7E-14 77.8 6.0 67 5-83 53-133 (143)
19 2vj2_A Jagged-1; signalling, p 98.9 3.7E-10 1.2E-14 84.5 2.0 89 21-128 17-129 (169)
20 2vj3_A Neurogenic locus notch 98.9 2.1E-09 7.2E-14 77.3 4.8 67 5-83 46-119 (135)
21 1z1y_A Ookinete surface protei 98.8 2.3E-10 7.8E-15 86.7 -1.1 64 6-81 7-87 (186)
22 4aqs_A Laminin subunit beta-1; 98.8 2.9E-09 9.9E-14 92.7 5.4 111 21-137 343-483 (525)
23 4fbr_A Lectin, myxobacterial h 98.8 7.9E-12 2.7E-16 99.5 -9.9 80 4-83 99-202 (267)
24 1x7a_L Coagulation factor IX, 98.7 1.1E-08 3.8E-13 74.7 3.6 66 4-82 48-125 (146)
25 1tpg_A T-plasminogen activator 98.6 2.4E-08 8.2E-13 67.1 4.5 32 52-83 50-86 (91)
26 1yo8_A Thrombospondin-2; EGF, 98.6 1.7E-08 5.9E-13 89.3 4.2 110 4-127 3-145 (634)
27 3zyj_B Netrin-G1; cell adhesio 98.6 1E-08 3.4E-13 86.6 2.3 88 10-113 297-415 (426)
28 4aqt_A Laminin subunit gamma-1 98.5 5.2E-08 1.8E-12 81.4 3.7 88 11-102 256-368 (375)
29 2c4f_L Coagulation factor VII 98.5 8.1E-08 2.8E-12 69.7 3.6 70 4-82 47-128 (142)
30 2wg3_C Hedgehog-interacting pr 98.4 3.2E-08 1.1E-12 85.0 0.7 57 11-83 398-455 (463)
31 1aut_L Activated protein C; se 98.4 8.5E-08 2.9E-12 66.9 2.4 71 3-83 5-90 (114)
32 2p28_B Integrin beta-2; hybrid 98.4 1E-07 3.6E-12 73.9 3.0 63 9-82 142-213 (217)
33 3u7u_G Neuregulin 1; signaling 98.4 1.5E-07 5.1E-12 57.2 2.9 34 4-37 8-50 (55)
34 1nfu_B Coagulation factor XA, 98.4 3.3E-08 1.1E-12 75.5 -0.1 69 4-83 42-121 (195)
35 2bou_A EGF-like module contain 98.4 8.9E-08 3E-12 69.3 1.5 77 11-88 54-139 (143)
36 1edm_B Factor IX; epidermal gr 98.4 6.1E-07 2.1E-11 50.4 4.6 33 4-36 3-39 (39)
37 2vh0_B Activated factor XA lig 98.4 5E-08 1.7E-12 70.1 -0.1 68 5-83 43-121 (134)
38 2y38_A Laminin subunit alpha-5 98.3 2.2E-07 7.4E-12 78.1 3.7 78 10-95 266-384 (403)
39 2w86_A Fibrillin-1, fibrillin1 98.3 4E-08 1.4E-12 71.5 -0.8 30 3-33 3-36 (147)
40 3h5c_B Vitamin K-dependent pro 98.3 4.3E-07 1.5E-11 73.8 5.2 68 3-82 4-79 (317)
41 3u7u_G Neuregulin 1; signaling 98.3 2.2E-07 7.5E-12 56.4 2.4 33 52-84 10-50 (55)
42 1uzk_A Fibrillin-1; glycoprote 98.3 1.8E-07 6.3E-12 69.0 2.0 112 4-128 3-159 (162)
43 1emn_A Fibrillin; extracellula 98.3 7.4E-07 2.5E-11 58.4 4.0 63 5-81 6-78 (82)
44 1lmj_A Fibrillin 1; EGF, calci 98.2 8.8E-07 3E-11 58.5 3.0 66 4-82 3-82 (86)
45 2wg3_C Hedgehog-interacting pr 98.1 4.8E-07 1.6E-11 77.6 1.3 56 57-129 398-456 (463)
46 1dx5_I Thrombomodulin; serine 98.0 4.5E-07 1.5E-11 63.6 -0.6 68 1-82 1-78 (118)
47 1z1y_A Ookinete surface protei 98.0 5.9E-07 2E-11 67.7 0.0 66 6-83 93-175 (186)
48 1a3p_A Epidermal growth factor 98.0 5.3E-06 1.8E-10 48.0 3.5 26 11-36 10-41 (45)
49 1egf_A Epidermal growth factor 98.0 8.7E-06 3E-10 48.8 4.4 33 5-37 4-45 (53)
50 1k36_A Epiregulin; EGF-like fo 98.0 4.2E-06 1.5E-10 48.8 2.9 26 10-36 12-43 (46)
51 1z6c_A Vitamin K-dependent pro 97.9 4.8E-06 1.7E-10 55.1 2.4 62 4-82 3-77 (87)
52 1x7a_L Coagulation factor IX, 97.9 6.4E-06 2.2E-10 59.9 2.9 72 46-129 44-127 (146)
53 1nql_B Epidermal growth factor 97.8 8.7E-06 3E-10 48.9 2.4 30 8-37 10-45 (53)
54 1tpg_A T-plasminogen activator 97.8 2.4E-05 8.2E-10 52.2 4.1 72 38-129 6-87 (91)
55 1nfu_B Coagulation factor XA, 97.8 4.1E-06 1.4E-10 63.8 0.2 71 47-129 39-122 (195)
56 1hae_A Heregulin-alpha; growth 97.7 6.3E-06 2.1E-10 51.2 0.9 34 7-40 9-51 (63)
57 2y38_A Laminin subunit alpha-5 97.7 1E-05 3.4E-10 68.0 2.3 68 68-141 286-385 (403)
58 1edm_B Factor IX; epidermal gr 97.7 1.9E-05 6.7E-10 44.0 2.4 29 54-82 7-38 (39)
59 2k2s_B Micronemal protein 6; m 97.7 6.2E-06 2.1E-10 51.0 0.1 32 5-36 12-50 (61)
60 1aut_L Activated protein C; se 97.6 4.2E-05 1.4E-09 53.0 4.1 61 58-126 22-88 (114)
61 2vh0_B Activated factor XA lig 97.6 7.8E-06 2.7E-10 58.5 0.2 73 47-128 39-121 (134)
62 3ltf_D Protein spitz; receptor 97.6 3.2E-05 1.1E-09 47.2 2.7 31 11-41 15-53 (58)
63 4aqt_A Laminin subunit gamma-1 97.6 1.6E-05 5.5E-10 66.3 1.7 64 68-137 272-358 (375)
64 1a3p_A Epidermal growth factor 97.5 5.5E-05 1.9E-09 43.6 2.4 27 57-83 10-41 (45)
65 2w2n_E LDL receptor, low-densi 97.5 2.6E-05 9.1E-10 53.6 1.1 62 7-82 27-103 (107)
66 3ca7_A Protein spitz; argos, E 97.5 5.2E-05 1.8E-09 45.2 2.1 28 9-36 13-48 (52)
67 1yo8_A Thrombospondin-2; EGF, 97.5 5.7E-05 1.9E-09 66.9 3.3 78 5-82 45-145 (634)
68 3p5b_L Low density lipoprotein 97.4 0.00017 5.8E-09 60.3 5.0 67 6-86 2-78 (400)
69 1egf_A Epidermal growth factor 97.4 0.00024 8E-09 42.4 4.1 28 56-83 12-44 (53)
70 2c4f_L Coagulation factor VII 97.3 5.5E-05 1.9E-09 54.5 1.5 66 53-128 50-129 (142)
71 2p26_A Integrin beta-2; hybrid 97.3 0.00011 3.9E-09 58.8 3.1 64 10-78 196-264 (280)
72 1nql_B Epidermal growth factor 97.3 6.5E-05 2.2E-09 45.0 0.9 33 55-87 11-48 (53)
73 2fd6_A Urokinase-type plasmino 97.2 0.00023 7.8E-09 50.0 3.3 53 11-82 2-62 (122)
74 1k36_A Epiregulin; EGF-like fo 97.2 0.00017 5.9E-09 41.8 2.1 27 56-83 12-43 (46)
75 3h5c_B Vitamin K-dependent pro 97.1 0.00058 2E-08 55.2 5.6 61 53-124 8-76 (317)
76 1hae_A Heregulin-alpha; growth 97.0 0.00023 7.7E-09 44.0 1.8 31 55-85 11-49 (63)
77 1emn_A Fibrillin; extracellula 97.0 0.00087 3E-08 43.5 4.4 56 56-125 12-77 (82)
78 3v65_B Low-density lipoprotein 97.0 0.00016 5.6E-09 60.0 0.9 64 5-82 4-82 (386)
79 3ltf_D Protein spitz; receptor 97.0 0.00026 8.9E-09 43.1 1.6 32 57-88 15-53 (58)
80 2w86_A Fibrillin-1, fibrillin1 96.9 0.00017 5.8E-09 52.0 0.2 26 55-81 9-37 (147)
81 2ygo_A WIF-1, WNT inhibitory f 96.9 0.00071 2.4E-08 50.8 3.6 28 56-83 153-180 (188)
82 3ca7_A Protein spitz; argos, E 96.8 0.00033 1.1E-08 41.6 1.0 28 56-83 14-48 (52)
83 2k2s_B Micronemal protein 6; m 96.8 0.00013 4.5E-09 44.9 -1.0 30 53-82 14-49 (61)
84 3nt1_A Prostaglandin-endoperox 96.5 0.0012 4.3E-08 57.9 3.1 33 5-37 2-40 (587)
85 1uzk_A Fibrillin-1; glycoprote 96.5 0.00025 8.5E-09 51.9 -1.4 69 14-83 60-159 (162)
86 3zyj_B Netrin-G1; cell adhesio 96.4 0.0005 1.7E-08 58.1 0.2 62 62-128 304-398 (426)
87 2i9a_A Urokinase-type plasmino 96.3 0.0035 1.2E-07 45.2 3.9 30 8-37 11-47 (145)
88 3p5b_L Low density lipoprotein 96.3 0.013 4.4E-07 48.8 7.9 63 57-132 7-79 (400)
89 1lmj_A Fibrillin 1; EGF, calci 96.2 0.001 3.6E-08 43.4 0.7 57 56-124 11-79 (86)
90 1q4g_A Prostaglandin G/H synth 96.1 0.0017 5.8E-08 56.8 1.8 33 5-37 3-41 (553)
91 3m0c_C LDL receptor, low-densi 96.1 0.025 8.6E-07 51.4 9.2 49 63-124 325-383 (791)
92 1z6c_A Vitamin K-dependent pro 96.1 0.0019 6.4E-08 42.3 1.3 55 58-128 13-78 (87)
93 2w2n_E LDL receptor, low-densi 96.0 0.0025 8.4E-08 43.5 1.8 50 63-125 42-101 (107)
94 1dx5_I Thrombomodulin; serine 95.9 0.00061 2.1E-08 47.3 -1.7 38 84-124 64-111 (118)
95 3fl7_A Ephrin receptor; ATP-bi 95.8 0.026 9E-07 49.1 7.7 110 58-174 252-373 (536)
96 3e50_C Protransforming growth 95.6 0.0084 2.9E-07 35.2 2.8 27 9-36 13-45 (50)
97 2e26_A Reelin, reeler protein; 95.4 0.0025 8.4E-08 57.0 -0.3 45 24-83 521-565 (725)
98 2fd6_A Urokinase-type plasmino 95.3 0.009 3.1E-07 41.7 2.6 27 57-83 2-34 (122)
99 1iox_A Betacellulin; EGF-like 95.3 0.0083 2.8E-07 35.2 2.1 27 9-36 13-45 (50)
100 2p26_A Integrin beta-2; hybrid 95.1 0.013 4.4E-07 46.9 3.1 25 57-82 197-221 (280)
101 1n7d_A LDL receptor, low-densi 94.7 0.12 4.2E-06 46.1 8.8 49 63-124 307-365 (699)
102 1g1s_A P-selectin; selectin, l 94.7 0.0073 2.5E-07 43.7 0.7 31 53-83 122-155 (162)
103 1xdt_R Hbegf, heparin-binding 94.4 0.019 6.6E-07 36.9 2.1 27 9-36 45-77 (79)
104 3m0c_C LDL receptor, low-densi 94.1 0.044 1.5E-06 49.9 4.5 60 7-80 310-384 (791)
105 3nt1_A Prostaglandin-endoperox 94.0 0.015 5.3E-07 51.0 1.4 31 53-83 4-39 (587)
106 2rnl_A Amphiregulin; AR, color 94.0 0.046 1.6E-06 32.0 3.0 26 10-36 18-49 (50)
107 3e50_C Protransforming growth 94.0 0.034 1.2E-06 32.5 2.3 28 55-83 13-45 (50)
108 1n7d_A LDL receptor, low-densi 93.7 0.07 2.4E-06 47.7 5.1 51 21-85 315-371 (699)
109 3asi_A Neurexin-1-alpha; beta- 93.5 0.048 1.6E-06 45.4 3.4 32 6-37 187-223 (410)
110 1q4g_A Prostaglandin G/H synth 93.4 0.017 5.8E-07 50.5 0.4 31 53-83 5-40 (553)
111 2e26_A Reelin, reeler protein; 92.5 0.035 1.2E-06 49.6 1.2 29 8-36 537-565 (725)
112 1iox_A Betacellulin; EGF-like 92.0 0.037 1.3E-06 32.3 0.5 27 56-83 14-45 (50)
113 3cfw_A L-selectin; EGF, cell a 91.7 0.074 2.5E-06 38.3 2.0 31 53-83 122-155 (164)
114 3v65_B Low-density lipoprotein 91.7 0.15 5E-06 42.0 4.0 53 63-128 16-83 (386)
115 3qcw_A Neurexin-1-alpha; synap 91.4 0.14 4.9E-06 48.7 4.1 32 6-37 1019-1055(1245)
116 1xdt_R Hbegf, heparin-binding 91.3 0.1 3.6E-06 33.4 2.1 27 55-82 45-76 (79)
117 3fl7_A Ephrin receptor; ATP-bi 91.2 0.065 2.2E-06 46.6 1.4 64 10-78 250-320 (536)
118 2i9a_A Urokinase-type plasmino 91.2 0.081 2.8E-06 38.0 1.7 27 57-83 14-46 (145)
119 1g1t_A E-selectin; EGF, adhesi 90.9 0.047 1.6E-06 39.0 0.2 30 54-83 123-155 (157)
120 2rnl_A Amphiregulin; AR, color 88.7 0.17 5.7E-06 29.5 1.3 27 56-83 18-49 (50)
121 2ygo_A WIF-1, WNT inhibitory f 88.5 0.24 8.2E-06 37.0 2.4 24 101-128 155-180 (188)
122 3qcw_A Neurexin-1-alpha; synap 88.4 0.24 8E-06 47.2 2.9 32 5-36 620-656 (1245)
123 3asi_A Neurexin-1-alpha; beta- 87.8 0.21 7.1E-06 41.5 1.9 32 52-83 187-222 (410)
124 1apq_A Complement protease C1R 87.8 0.52 1.8E-05 27.0 3.2 21 10-32 20-44 (53)
125 2ddu_A Reelin; beta-jelly-roll 84.8 0.15 5E-06 42.4 -0.5 26 8-33 194-219 (387)
126 1ob1_C Major merozoite surface 75.8 3.4 0.00012 27.4 3.9 70 1-77 1-83 (99)
127 2kl7_A Fibulin-4; secreted, ca 71.6 2.2 7.6E-05 26.3 2.1 23 9-31 10-37 (71)
128 1gl4_A Nidogen-1, entactin; im 68.7 1.5 5.1E-05 34.9 1.0 28 9-36 12-45 (285)
129 2ddu_A Reelin; beta-jelly-roll 65.7 1 3.6E-05 37.3 -0.5 24 56-80 196-219 (387)
130 1n1i_A Merozoite surface prote 62.9 8.4 0.00029 25.8 3.6 64 3-76 9-83 (105)
131 3g5c_A ADAM 22; alpha/beta fol 62.2 2.5 8.4E-05 36.5 1.1 28 10-37 454-482 (510)
132 3t5o_A Complement component C6 61.8 3.2 0.00011 38.3 1.9 30 8-37 501-534 (913)
133 1gl4_A Nidogen-1, entactin; im 60.6 1.1 3.8E-05 35.6 -1.2 28 55-82 12-44 (285)
134 3t3p_B Integrin beta-3; integr 58.3 4.7 0.00016 34.3 2.2 26 56-82 446-472 (472)
135 2jkh_L Factor X light chain; p 51.8 3 0.0001 24.2 -0.0 15 63-77 14-31 (55)
136 1mox_A Epidermal growth factor 48.3 16 0.00054 31.3 3.9 53 33-90 190-245 (501)
137 3g5c_A ADAM 22; alpha/beta fol 47.8 7.6 0.00026 33.4 1.8 27 57-83 455-481 (510)
138 1bx7_A Hirustasin; anti-coagul 46.9 41 0.0014 19.5 5.5 34 6-43 5-38 (55)
139 3tbd_A Netrin-G2, laminet-2; l 45.4 9.5 0.00032 31.0 2.0 37 11-48 271-312 (338)
140 2dtg_E Insulin receptor; IR ec 42.9 39 0.0013 30.7 5.9 53 70-123 225-294 (897)
141 1rju_V Metallothionein; Cu(I)- 39.4 17 0.00059 18.5 1.7 18 56-75 8-25 (36)
142 3v4v_B Integrin beta-7; cell a 37.6 7 0.00024 33.6 0.0 25 57-82 468-493 (503)
143 1jlz_A Tityustoxin alpha-KTX; 37.5 14 0.00046 18.2 1.1 17 11-27 8-24 (26)
144 2bz6_L Blood coagulation facto 34.8 14 0.00047 21.1 1.0 15 21-35 21-39 (53)
145 1kig_L Factor XA; glycoprotein 34.6 8.3 0.00028 21.9 0.0 11 67-77 18-28 (51)
146 3bg4_D Guamerin; chymotrypsin, 32.2 26 0.00089 20.3 1.9 38 56-98 15-54 (57)
147 3fby_A COMP, cartilage oligome 30.6 20 0.00068 31.1 1.7 24 9-32 26-54 (551)
148 3t5o_A Complement component C6 30.0 23 0.00078 32.6 2.1 32 50-83 499-533 (913)
149 1eja_B Bdellastasin; complex ( 29.4 40 0.0014 19.8 2.4 38 57-99 14-53 (59)
150 1szb_A Mannose binding lectin- 26.8 21 0.00071 25.3 1.0 18 58-77 137-157 (170)
151 3tbd_A Netrin-G2, laminet-2; l 24.7 35 0.0012 27.6 2.1 38 103-144 277-316 (338)
152 2uwi_A CRME protein; receptor, 20.9 46 0.0016 23.2 1.8 10 68-77 79-88 (142)
153 1pvz_A K+ toxin-like peptide; 20.3 34 0.0012 17.5 0.8 15 11-25 16-30 (31)
No 1
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.77 E-value=6.3e-19 Score=149.96 Aligned_cols=114 Identities=41% Similarity=1.091 Sum_probs=102.9
Q ss_pred CCCCCCeEec--ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC-CCceecCCCCCCCCCCCCCCC
Q psy18122 11 ECLNGGVEMD--SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS-NFGCSCATGYQGEQCLEHCPE 87 (188)
Q Consensus 11 ~C~~~g~C~~--~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~-~~~C~C~~g~~G~~C~~~C~~ 87 (188)
||.++|+|.. +.|.|++||+|.+|+..|.++++|..|...|.+ .++|.+++.|.. ++.|.|++||+|..|+..|.+
T Consensus 204 ~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~-~~~C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~ 282 (423)
T 2gy5_A 204 ACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSG-QEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHP 282 (423)
T ss_dssp CCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCS-TTTTTTCCEEETTTTEEECCBTCBSGGGCBCCCT
T ss_pred CCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCC-CCCCCCCCEECCCCCeEEeCCCcccccccCccCC
Confidence 8999999997 999999999999999889999999999887763 457999999976 688999999999999977999
Q ss_pred CccCCCccCCCcccc--cceeccccccccccccCCccCCCCCCCC
Q psy18122 88 DYYGADCKQKCGECI--DGCDQYTGVCRGGCTTPYLIRPYCKQPH 130 (188)
Q Consensus 88 g~~G~~C~~~C~~C~--~~C~~~~g~C~~~C~~g~~~G~~C~~~c 130 (188)
||+|..|...|. |. +.|+...+ |. |.+|| +|.+|+...
T Consensus 283 G~~G~~C~~~C~-C~ngg~C~~~~~-C~--C~~G~-~G~~Ce~~~ 322 (423)
T 2gy5_A 283 GFYGPDCKLRCS-CNNGEMCDRFQG-CL--CSPGW-QGLQCEREG 322 (423)
T ss_dssp TBCSBTTCCBCC-CTTCCEEETTTE-EE--CCTTC-BSTTSCBCS
T ss_pred CCcCCccccccc-CCCCCEecCCCc-eE--CCCCC-cCCCCccCc
Confidence 999999998786 87 78988766 99 99999 999999864
No 2
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.71 E-value=2.6e-18 Score=128.42 Aligned_cols=122 Identities=26% Similarity=0.575 Sum_probs=95.9
Q ss_pred CCCCCCCeEec------ceE-eCCCCCcCCCCCCCCCCCCCCCCCC--------CCccCCCC-CCCCCcEecC-CCcee-
Q psy18122 10 IECLNGGVEMD------SMC-LCTPGFAGKKCEIPCDRNNFGHKCS--------MLCSKSPN-QCKGMVLCTS-NFGCS- 71 (188)
Q Consensus 10 ~~C~~~g~C~~------~~C-~C~~G~~G~~C~~~C~~g~~G~~C~--------~~C~c~~~-~C~~~g~C~~-~~~C~- 71 (188)
.||.++++|+. +.| .|++||+|.+|+. |.++|||..+. ..|.|... .....+.|.. ++.|+
T Consensus 1 C~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~-C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~ 79 (162)
T 1klo_A 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL-CDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLK 79 (162)
T ss_dssp CCSCTTCCEEECSSSCCEEECSCCTTEESTTSCE-ECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCC
T ss_pred CcCcCcCcccccCCCCCEEeCCCCCCCcCCCCcC-CCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccC
Confidence 37999999975 589 6999999999997 99999998765 23443311 0011256765 68895
Q ss_pred cCCCCCCCCCCCCCCCCccCCCcc-------CCCcccc--c------ceeccccccccccccCCccCCCCCCCCCCCCCC
Q psy18122 72 CATGYQGEQCLEHCPEDYYGADCK-------QKCGECI--D------GCDQYTGVCRGGCTTPYLIRPYCKQPHSYLEES 136 (188)
Q Consensus 72 C~~g~~G~~C~~~C~~g~~G~~C~-------~~C~~C~--~------~C~~~~g~C~~~C~~g~~~G~~C~~~c~~~~~~ 136 (188)
|+++|+|.+|+ .|++||+|..+. ..|. |. + .|+..+|+|. |.++| +|.+|++ |++++++
T Consensus 80 C~~g~~G~~Ce-~C~~Gy~g~~~~~~~~~~C~~C~-C~~~Gs~~~~~~Cd~~tG~C~--C~~g~-~G~~Cd~-C~~g~~g 153 (162)
T 1klo_A 80 CIYNTAGFYCD-RCKEGFFGNPLAPNPADKCKACA-CNPYGTVQQQSSCNPVTGQCQ--CLPHV-SGRDCGT-CDPGYYN 153 (162)
T ss_dssp BCTTEETTTTC-EECTTEEECTTCSSGGGSEEECC-CCTTTBGGGCCCCCTTTCCCC--BCTTE-ESTTCCE-ECTTCBC
T ss_pred CCCCCcCCCcC-cCchhhcCCccccCCCCCCeecc-CCCCCccCCCCCCCCCCCEeE--CCCCC-cCCCCCC-CCCCccc
Confidence 99999999998 599999998876 2344 65 2 7999999999 99999 9999997 9988876
Q ss_pred Ce
Q psy18122 137 PR 138 (188)
Q Consensus 137 ~~ 138 (188)
..
T Consensus 154 ~~ 155 (162)
T 1klo_A 154 LQ 155 (162)
T ss_dssp GG
T ss_pred CC
Confidence 54
No 3
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.64 E-value=1.8e-16 Score=130.58 Aligned_cols=117 Identities=30% Similarity=0.727 Sum_probs=60.1
Q ss_pred CCCCCCCCeEec-ceEeCCCCCcCCCCCCC-------------------CCCCCCCCCCCC-CccCCCCCCCCCcEecCC
Q psy18122 9 SIECLNGGVEMD-SMCLCTPGFAGKKCEIP-------------------CDRNNFGHKCSM-LCSKSPNQCKGMVLCTSN 67 (188)
Q Consensus 9 ~~~C~~~g~C~~-~~C~C~~G~~G~~C~~~-------------------C~~g~~G~~C~~-~C~c~~~~C~~~g~C~~~ 67 (188)
+++|.++|.|.. +.|.|++||+|.+|+.. |++||+|..|+. .|. .+|.++|+|...
T Consensus 152 ~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~---~~C~~~G~C~~~ 228 (324)
T 2ygq_A 152 PGGCRNGGFCNERRICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKANCS---TTCFNGGTCFYP 228 (324)
T ss_dssp SSCCCSSCEECTTSCEECCTTEESSSSCEESSSSCCCTTCEECSSCCEECCTTCBTTTTCBCCCS---SCCCSSCCBSCS
T ss_pred CCCCCCCCEECCCCeEECCCCCcCCCCCCCCCCCCCCCCCEEcCCCEEeCCCCccCCCcccCcCC---CCCCCCCeeCCC
Confidence 468999999997 99999999999998742 778899998873 443 578899999877
Q ss_pred CceecCCCCCCCCCCC-------------------CCCCCccCCCccCC-Ccc-cc--cceeccccccccccccCCccCC
Q psy18122 68 FGCSCATGYQGEQCLE-------------------HCPEDYYGADCKQK-CGE-CI--DGCDQYTGVCRGGCTTPYLIRP 124 (188)
Q Consensus 68 ~~C~C~~g~~G~~C~~-------------------~C~~g~~G~~C~~~-C~~-C~--~~C~~~~g~C~~~C~~g~~~G~ 124 (188)
+.|.|++||+|..|+. .|++||.|..|+.. |.. |. +.|.. .++|. |.+|| +|.
T Consensus 229 ~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~-~~~C~--C~~G~-~G~ 304 (324)
T 2ygq_A 229 GKCICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHE-PNKCQ--CQEGW-HGR 304 (324)
T ss_dssp SCBCCCTTCCTTTTC-----------------------------------------------------------------
T ss_pred CeeeCCCCccCCCCCcCcCCCcCCCCCEECCCCEEECCCCCcCCCCcCCCCCCCCCCCCEECC-CCEeE--CCCCC-cCC
Confidence 8899999999988863 47788888888753 432 64 77765 57888 99999 999
Q ss_pred CCCCCCCC
Q psy18122 125 YCKQPHSY 132 (188)
Q Consensus 125 ~C~~~c~~ 132 (188)
+|+...+.
T Consensus 305 ~C~~~~~~ 312 (324)
T 2ygq_A 305 HCNKRYEA 312 (324)
T ss_dssp --------
T ss_pred CCCCCCcc
Confidence 99886543
No 4
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.49 E-value=1.9e-13 Score=99.41 Aligned_cols=110 Identities=22% Similarity=0.594 Sum_probs=79.9
Q ss_pred CCCCCCCCCCCeEec------ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEec-------C---CCc
Q psy18122 6 NENSIECLNGGVEMD------SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCT-------S---NFG 69 (188)
Q Consensus 6 ~~~~~~C~~~g~C~~------~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~-------~---~~~ 69 (188)
++.++||.++|+|+. +.|.|++||+|..|+...........|...-.|...+|.++++|. + .+.
T Consensus 2 ~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~ 81 (143)
T 4d90_A 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYV 81 (143)
T ss_dssp -CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEE
T ss_pred cCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeE
Confidence 457889999999985 689999999999998632211222334433344577899999998 3 578
Q ss_pred eecCCCCCCCCCCC---CCCCCccCCCccCCCcccc--cceecccc--ccccccccCCccCCCCCCC
Q psy18122 70 CSCATGYQGEQCLE---HCPEDYYGADCKQKCGECI--DGCDQYTG--VCRGGCTTPYLIRPYCKQP 129 (188)
Q Consensus 70 C~C~~g~~G~~C~~---~C~~g~~G~~C~~~C~~C~--~~C~~~~g--~C~~~C~~g~~~G~~C~~~ 129 (188)
|.|++||+|..|+. .|... + |. +.|.+..+ +|. |++|| +|.+|+..
T Consensus 82 C~C~~G~~G~~C~~~i~~C~~~--------~---C~~~~~C~~~~g~~~C~--C~~G~-~G~~c~~~ 134 (143)
T 4d90_A 82 CKCPRGFNGIHCQHNINECEVE--------P---CKNGGICTDLVANYSCE--CPGEF-MGRNCQYK 134 (143)
T ss_dssp EECCTTEESTTSCEECCTTTTC--------C---SCTTCEEEEETTEEEEE--CCTTC-BSTTSCBC
T ss_pred eECcCCCcCCCcccCCCcCCCC--------C---CCCCCEeECCCCCeEeE--CCCCC-ccCCceec
Confidence 99999999999972 34321 1 43 67766555 799 99999 99999874
No 5
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.40 E-value=5.4e-13 Score=96.40 Aligned_cols=100 Identities=26% Similarity=0.694 Sum_probs=74.9
Q ss_pred CCCCC--CCCCCCCCeEec----ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---CCceecCC
Q psy18122 4 NTNEN--SIECLNGGVEMD----SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---NFGCSCAT 74 (188)
Q Consensus 4 ~~~~~--~~~C~~~g~C~~----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~~~C~C~~ 74 (188)
.+++. ++||.++|+|++ +.|.|++||+|..|+... . .|...+|.++++|.+ .+.|.|++
T Consensus 5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~----------~--~C~~~~C~~~~~C~~~~g~~~C~C~~ 72 (135)
T 2vj3_A 5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDV----------N--ECVSNPCQNDATCLDQIGEFQCICMP 72 (135)
T ss_dssp CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEEC----------C--TTTTCCCCSSCEEEECSSCEEEECCT
T ss_pred cccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccC----------c--cCCCCCCCCCCEEeCCCCCceeeCCC
Confidence 34444 689999999987 699999999999997421 1 233568889999986 46799999
Q ss_pred CCCCCCCCC---CCCCCccCCCccCCCcccc--cceecccc--ccccccccCCccCCCCCCC
Q psy18122 75 GYQGEQCLE---HCPEDYYGADCKQKCGECI--DGCDQYTG--VCRGGCTTPYLIRPYCKQP 129 (188)
Q Consensus 75 g~~G~~C~~---~C~~g~~G~~C~~~C~~C~--~~C~~~~g--~C~~~C~~g~~~G~~C~~~ 129 (188)
||+|..|+. .|... +|. +.|....+ +|. |++|| +|..|+..
T Consensus 73 G~~G~~C~~~~~~C~~~-----------~C~~~g~C~~~~g~~~C~--C~~G~-~G~~C~~~ 120 (135)
T 2vj3_A 73 GYEGVHCEVNTDECASS-----------PCLHNGRCLDKINEFQCE--CPTGF-TGHLCQVD 120 (135)
T ss_dssp TEESSSSCEECCTTTTC-----------CSTTTCEEEECSSCEEEE--CCTTE-ESSSSCEE
T ss_pred CCcCCcceecCCcccCC-----------CcCCCCEeECCCCCeEEE--CCCCC-cCCccCcc
Confidence 999999863 23221 144 67766544 799 99999 99999853
No 6
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.39 E-value=2e-13 Score=116.13 Aligned_cols=93 Identities=26% Similarity=0.678 Sum_probs=76.4
Q ss_pred CCCCCCCCCCCCCccCCCCCCCCCcEecC-CCceecCCCCCCCCCCCCCCCCccCCCccCCCcc---cc--cceeccccc
Q psy18122 38 CDRNNFGHKCSMLCSKSPNQCKGMVLCTS-NFGCSCATGYQGEQCLEHCPEDYYGADCKQKCGE---CI--DGCDQYTGV 111 (188)
Q Consensus 38 C~~g~~G~~C~~~C~c~~~~C~~~g~C~~-~~~C~C~~g~~G~~C~~~C~~g~~G~~C~~~C~~---C~--~~C~~~~g~ 111 (188)
|.+||+|..|+..|. +|.++|+|.+ .+.|.|++||+|..|+..|.++|+|..|...|.. |. +.|+..+++
T Consensus 189 C~~g~~G~~C~~~C~----~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~ 264 (423)
T 2gy5_A 189 CEAQKWGPECNHLCT----ACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYG 264 (423)
T ss_dssp SCTTEESTTSCEECC----CCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTE
T ss_pred CCCCCCCCCCCCCCC----CCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCe
Confidence 677777777766553 7889999987 7899999999999999779999999999876651 54 677777889
Q ss_pred cccccccCCccCCCCCCCCCCCCCCC
Q psy18122 112 CRGGCTTPYLIRPYCKQPHSYLEESP 137 (188)
Q Consensus 112 C~~~C~~g~~~G~~C~~~c~~~~~~~ 137 (188)
|. |.+|| .|.+|+..|+++++++
T Consensus 265 C~--C~~G~-~G~~C~~~C~~G~~G~ 287 (423)
T 2gy5_A 265 CS--CATGW-KGLQCNEACHPGFYGP 287 (423)
T ss_dssp EE--CCBTC-BSGGGCBCCCTTBCSB
T ss_pred EE--eCCCc-ccccccCccCCCCcCC
Confidence 99 99999 9999998787776654
No 7
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.37 E-value=2.3e-12 Score=115.22 Aligned_cols=106 Identities=26% Similarity=0.658 Sum_probs=66.5
Q ss_pred CCeEecceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCC--CCCCCCCcEecCCCceecC----CCCCCCCCCC-----
Q psy18122 15 GGVEMDSMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKS--PNQCKGMVLCTSNFGCSCA----TGYQGEQCLE----- 83 (188)
Q Consensus 15 ~g~C~~~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~--~~~C~~~g~C~~~~~C~C~----~g~~G~~C~~----- 83 (188)
+|.+..+.|.|++||.|.+|+ +..++++......|.-. ..+|.++|+|.. +.|.|+ +||+|..|+.
T Consensus 452 ~G~~~~G~C~C~~Gy~G~~Ce--~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-g~C~C~~~~~~Gy~G~~Ce~~~~~C 528 (690)
T 3fcs_B 452 NGTFECGVCRCGPGWLGSQCE--CSEEDYRPSQQDECSPREGQPVCSQRGECLC-GQCVCHSSDFGKITGKYCECDDFSC 528 (690)
T ss_dssp SEEEETTEEEECTTCCSSSSC--CSCC------CCCCSSSSSSCGGGGSEEECS-SSEEECCCSSCCCBSTTSCBCSSCC
T ss_pred CCeEeCCceEeCCCccCCcee--eccCccCCccCCcCCCCCCCCCCCCCCEEEC-CeeEeecCCCCCeeCCCcCcccCcC
Confidence 444444779999999999996 44444544444444321 134777777775 777777 7777777751
Q ss_pred -------------------CCCCCccCCCcc-----CCCc-----ccc--cceecccccccccc-ccCCccCCCCCC
Q psy18122 84 -------------------HCPEDYYGADCK-----QKCG-----ECI--DGCDQYTGVCRGGC-TTPYLIRPYCKQ 128 (188)
Q Consensus 84 -------------------~C~~g~~G~~C~-----~~C~-----~C~--~~C~~~~g~C~~~C-~~g~~~G~~C~~ 128 (188)
.|.+||.|..|+ ..|. .|. +.|. .++|. | .+|| +|..|+.
T Consensus 529 ~~~~~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~--~g~C~--C~~~Gy-~G~~Ce~ 600 (690)
T 3fcs_B 529 VRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCE--CGSCV--CIQPGS-YGDTCEK 600 (690)
T ss_dssp CBSSSSBGGGSEEEETTEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEE--TTEEE--CCSTTC-BSTTSCB
T ss_pred cCCCCCCCCCCCEecCCeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEe--CCEEE--CCCCCc-cCCCcCc
Confidence 366777777776 1243 154 6664 36788 8 8888 8888876
No 8
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.36 E-value=5.5e-13 Score=118.95 Aligned_cols=113 Identities=27% Similarity=0.692 Sum_probs=80.8
Q ss_pred CCCCCCCCCeEecceEeCCCCCcCCCCCCCCCCCCCCCCCC-CCccCC--CCCCCCCcEecCCCceecC------CCCCC
Q psy18122 8 NSIECLNGGVEMDSMCLCTPGFAGKKCEIPCDRNNFGHKCS-MLCSKS--PNQCKGMVLCTSNFGCSCA------TGYQG 78 (188)
Q Consensus 8 ~~~~C~~~g~C~~~~C~C~~G~~G~~C~~~C~~g~~G~~C~-~~C~c~--~~~C~~~g~C~~~~~C~C~------~g~~G 78 (188)
.+.+|.++|.|..+.|.|++||.|.+|+ |+.++++.... ..|.-. ..+|.++|.|.. +.|.|+ +||+|
T Consensus 433 ~s~~Cs~~G~C~~g~C~C~~Gy~G~~Ce--c~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-G~C~C~~~~~~~~G~~G 509 (687)
T 3k6s_B 433 DRSLCHGKGFLECGICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYG 509 (687)
T ss_dssp CSSTGGGSEEESSSSEEECSSEESTTSC--EESSSCCCSGGGSTTSSSTTSCGGGSSEEEET-TEEEECCCCSTTCCEES
T ss_pred CCCCCCCCCEEeCCEeEcCCCCcCCccc--ccCCcCCccccCCCCCCCCCCCcCCCCCEEeC-CEEEcCCCCCCCCCccc
Confidence 5678999999999999999999999998 55554443221 123211 234777888875 778888 88888
Q ss_pred CCCCC--------------------------CCCCCccCCCcc-----CCCcc-----cc--cceeccccccccccccCC
Q psy18122 79 EQCLE--------------------------HCPEDYYGADCK-----QKCGE-----CI--DGCDQYTGVCRGGCTTPY 120 (188)
Q Consensus 79 ~~C~~--------------------------~C~~g~~G~~C~-----~~C~~-----C~--~~C~~~~g~C~~~C~~g~ 120 (188)
..|+. .|.+||.|..|+ ..|.. |. +.|.. ++|. |.+||
T Consensus 510 ~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~--g~C~--C~~Gy 585 (687)
T 3k6s_B 510 QYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC--NVCE--CHSGY 585 (687)
T ss_dssp TTSCEESSCSCEETTEETSHHHHEEEETTEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS--SCBC--CSTTC
T ss_pred cccccccccccCCCCcCcCCCCCCeEECCEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC--CEEE--CCCCC
Confidence 87751 356778888776 22431 54 67764 7899 99999
Q ss_pred ccCCCCCC
Q psy18122 121 LIRPYCKQ 128 (188)
Q Consensus 121 ~~G~~C~~ 128 (188)
+|..|+.
T Consensus 586 -~G~~Ce~ 592 (687)
T 3k6s_B 586 -QLPLCQE 592 (687)
T ss_dssp -CTTTTCC
T ss_pred -cCCCCCC
Confidence 9999987
No 9
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.24 E-value=1.8e-12 Score=113.04 Aligned_cols=103 Identities=21% Similarity=0.563 Sum_probs=48.7
Q ss_pred ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCC------CCCCCCcEecC-CCceecCCCCCCCCCCCCCCCCccCCC
Q psy18122 21 SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSP------NQCKGMVLCTS-NFGCSCATGYQGEQCLEHCPEDYYGAD 93 (188)
Q Consensus 21 ~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~------~~C~~~g~C~~-~~~C~C~~g~~G~~C~~~C~~g~~G~~ 93 (188)
+.|.|.++|.|..|+. |.+||+|..|.....|.. +.|.+++.|.. ++.|.|++||+|..|+ .|.+||+|..
T Consensus 407 ~~C~C~~g~~G~~C~~-C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce-~C~~G~~g~~ 484 (525)
T 4aqs_A 407 GQCRCKLHVEGERCDV-CKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-QCLPQHWGLS 484 (525)
T ss_dssp SCCCBCTTEETTTTCE-ECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTC-C---------
T ss_pred CccCCCCCCCCCcccC-CCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcc-cCCCCccCCC
Confidence 7799999999999987 999999999874433332 33445555654 5789999999999998 6999999864
Q ss_pred ccCC-Ccc--cc------cceeccccccccccccCCccCCCCCC
Q psy18122 94 CKQK-CGE--CI------DGCDQYTGVCRGGCTTPYLIRPYCKQ 128 (188)
Q Consensus 94 C~~~-C~~--C~------~~C~~~~g~C~~~C~~g~~~G~~C~~ 128 (188)
.... |.+ |. ..|+..+|+|. |++|| +|.+|++
T Consensus 485 ~~~~~C~~C~C~~~gs~~~~C~~~tG~C~--C~~G~-~G~~Ceq 525 (525)
T 4aqs_A 485 NDLDGCRPCDCDLGGALNNSCSEDSGQCS--CLPHM-IGRQCNE 525 (525)
T ss_dssp --------------------------------------------
T ss_pred CCCCCCcCCCCCCCCccCCccCCCCCeeE--CCCCC-cCCCCCC
Confidence 3221 322 43 46777889999 99999 9999975
No 10
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.22 E-value=4.7e-12 Score=94.88 Aligned_cols=100 Identities=25% Similarity=0.662 Sum_probs=59.9
Q ss_pred CCCCCCeEec-ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCC-CCcEecCCCceecCCCCCCCCCCC-----
Q psy18122 11 ECLNGGVEMD-SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCK-GMVLCTSNFGCSCATGYQGEQCLE----- 83 (188)
Q Consensus 11 ~C~~~g~C~~-~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~-~~g~C~~~~~C~C~~g~~G~~C~~----- 83 (188)
+|.++++|.. +.|.|++||+|..|+.. .|. ..|. .+|.|...+.|.|++||+|..|+.
T Consensus 39 ~c~~~g~C~~~g~C~C~~G~~G~~C~~~------------~C~---~~C~~~~g~C~~~~~C~C~~G~~G~~C~~C~~~~ 103 (169)
T 2vj2_A 39 DFFGHYACDQNGNKTCMEGWMGPECNRA------------ICR---QGCSPKHGSCKLPGDCRCQYGWQGLYCDKCIPHP 103 (169)
T ss_dssp ETTEEEEECSSCCEEECTTEESTTSCEE------------CCC---TTCCTTTEECSSTTCCEECTTEESSSSCEECCCT
T ss_pred CcCCCCEeCCCCeeECCCCCcCCCCCCC------------CCC---CCCCCCCcccCCCCeeECCCCCCCCCcccCCCCC
Confidence 4666677755 77788888888777642 111 1233 345565556677777777766652
Q ss_pred -------------CCCCCccCCCccCC---Cc---ccc--cceecc---ccccccccccCCccCCCCCC
Q psy18122 84 -------------HCPEDYYGADCKQK---CG---ECI--DGCDQY---TGVCRGGCTTPYLIRPYCKQ 128 (188)
Q Consensus 84 -------------~C~~g~~G~~C~~~---C~---~C~--~~C~~~---~g~C~~~C~~g~~~G~~C~~ 128 (188)
.|++||.|..|+.. |. +|. +.|.+. +.+|. |++|| +|.+|++
T Consensus 104 ~C~~g~C~~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~--C~~G~-~G~~Ce~ 169 (169)
T 2vj2_A 104 GCVHGICNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCS--CPEGY-SGPNCEI 169 (169)
T ss_dssp TCSSEECSSTTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEE--CCTTC-CSTTSCC
T ss_pred CCCCCCcCCCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeE--CCCCC-cCcCcCC
Confidence 34455666555421 21 254 677653 35788 88888 8888863
No 11
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=99.18 E-value=1.3e-11 Score=95.94 Aligned_cols=107 Identities=28% Similarity=0.622 Sum_probs=73.0
Q ss_pred CCCCCCCCCeEecceEeCCCCCcCCCCCCCCCCCCCCCCCC-CCccC--CCCCCCCCcEecCCCceecCCCC------CC
Q psy18122 8 NSIECLNGGVEMDSMCLCTPGFAGKKCEIPCDRNNFGHKCS-MLCSK--SPNQCKGMVLCTSNFGCSCATGY------QG 78 (188)
Q Consensus 8 ~~~~C~~~g~C~~~~C~C~~G~~G~~C~~~C~~g~~G~~C~-~~C~c--~~~~C~~~g~C~~~~~C~C~~g~------~G 78 (188)
++..|+++|+|..+.|.|++||+|.+|+ |+.+.+...+. ..|.- ...+|.++|+|.. +.|.|.+|| +|
T Consensus 94 ~~~~Csg~G~C~~g~C~C~~G~~G~~Ce--c~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-g~C~C~~gw~~~~~~~G 170 (217)
T 2p28_B 94 DRSLCHGKGFLECGICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYG 170 (217)
T ss_dssp --CTTTTSEEEETTEEEECTTEESTTSC--EECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-TEEEECCCCSTTCCEES
T ss_pred CCCccCCCceEECCEEECCCCccCCccc--ccCcccccccCCCcCCCCCCCCCCCCCCEEeC-CceECCCCCCCcccEEC
Confidence 4567999999999999999999999998 55443322110 12321 2457999999997 899999995 78
Q ss_pred CCCCC---CCCCCccCCCccCCCcccc--cceeccccccccccccCCccCCCCCC
Q psy18122 79 EQCLE---HCPEDYYGADCKQKCGECI--DGCDQYTGVCRGGCTTPYLIRPYCKQ 128 (188)
Q Consensus 79 ~~C~~---~C~~g~~G~~C~~~C~~C~--~~C~~~~g~C~~~C~~g~~~G~~C~~ 128 (188)
.+|+. .|+.. .|.. |. -. +.|. .++|. |.+|| +|..|+.
T Consensus 171 ~~Ce~~~~~C~~~-~g~~----C~-~~~~G~C~--~g~C~--C~~G~-~G~~C~~ 214 (217)
T 2p28_B 171 QYCECDTINCERY-NGQV----CG-GPGRGLCF--CGKCR--CHPGF-EGSACQH 214 (217)
T ss_dssp TTSCEESSCSCEE-TTEE----TT-CTTTEEEE--TTEEE--ECTTE-ESTTSCE
T ss_pred CCcccCCccCCCC-CCCC----CC-CCCCcEEe--CCeeE--CCCCC-ccCCcCC
Confidence 87762 34321 1111 22 12 5565 47899 99999 9999986
No 12
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.17 E-value=1.5e-11 Score=101.12 Aligned_cols=71 Identities=34% Similarity=0.959 Sum_probs=34.8
Q ss_pred CCCCCCCeEec-ceEeCCCCCcCCCCCCC-------------------CCCCCCCCCCCC-CccCCCCCCCCCcEecCCC
Q psy18122 10 IECLNGGVEMD-SMCLCTPGFAGKKCEIP-------------------CDRNNFGHKCSM-LCSKSPNQCKGMVLCTSNF 68 (188)
Q Consensus 10 ~~C~~~g~C~~-~~C~C~~G~~G~~C~~~-------------------C~~g~~G~~C~~-~C~c~~~~C~~~g~C~~~~ 68 (188)
.+|.++|+|.. +.|.|++||+|.+|+.. |++||+|..|+. .|. .+|.++|.|...+
T Consensus 185 ~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~---~~C~~~g~C~~~~ 261 (324)
T 2ygq_A 185 PRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEISKCP---QPCRNGGKCIGKS 261 (324)
T ss_dssp SCCCTTCEECSSCCEECCTTCBTTTTCBCCCSSCCCSSCCBSCSSCBCCCTTCCTTTTC---------------------
T ss_pred CCCCCCCEEcCCCEEeCCCCccCCCcccCcCCCCCCCCCeeCCCCeeeCCCCccCCCCCcCcCC---CcCCCCCEECCCC
Confidence 57999999998 99999999999998742 789999999973 443 5799999998878
Q ss_pred ceecCCCCCCCCCCC
Q psy18122 69 GCSCATGYQGEQCLE 83 (188)
Q Consensus 69 ~C~C~~g~~G~~C~~ 83 (188)
.|.|++||+|..|+.
T Consensus 262 ~C~C~~G~~G~~C~~ 276 (324)
T 2ygq_A 262 KCKCSKGYQGDLCSK 276 (324)
T ss_dssp ---------------
T ss_pred EEECCCCCcCCCCcC
Confidence 999999999999873
No 13
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.16 E-value=6.6e-11 Score=105.81 Aligned_cols=103 Identities=25% Similarity=0.614 Sum_probs=61.2
Q ss_pred CCCCCCCeEecceEeCC----CCCcCCCCCCCCCCCCCCCCCCCCccC-CCCCCCCCcEecCCCceecCCCCCCCCCC--
Q psy18122 10 IECLNGGVEMDSMCLCT----PGFAGKKCEIPCDRNNFGHKCSMLCSK-SPNQCKGMVLCTSNFGCSCATGYQGEQCL-- 82 (188)
Q Consensus 10 ~~C~~~g~C~~~~C~C~----~G~~G~~C~~~C~~g~~G~~C~~~C~c-~~~~C~~~g~C~~~~~C~C~~g~~G~~C~-- 82 (188)
.+|+++|+|..+.|.|+ +||.|.+|+..- ..|.- ...+|.++|.|.. +.|.|++||+|..|+
T Consensus 493 ~~Cs~~G~C~~g~C~C~~~~~~Gy~G~~Ce~~~----------~~C~~~~~~~C~~~G~C~~-g~C~C~~Gy~G~~CeC~ 561 (690)
T 3fcs_B 493 PVCSQRGECLCGQCVCHSSDFGKITGKYCECDD----------FSCVRYKGEMCSGHGQCSC-GDCLCDSDWTGYYCNCT 561 (690)
T ss_dssp CGGGGSEEECSSSEEECCCSSCCCBSTTSCBCS----------SCCCBSSSSBGGGSEEEET-TEEEECTTEESSSSCEE
T ss_pred CCCCCCCEEECCeeEeecCCCCCeeCCCcCccc----------CcCcCCCCCCCCCCCEecC-CeeECcCCCcCCCCccC
Confidence 45999999999999999 999999997310 01110 0124555555554 555555555555554
Q ss_pred C------------------------CC-CCCccCCCccCCCcccccceeccccccccccccCCccCCCCC
Q psy18122 83 E------------------------HC-PEDYYGADCKQKCGECIDGCDQYTGVCRGGCTTPYLIRPYCK 127 (188)
Q Consensus 83 ~------------------------~C-~~g~~G~~C~~~C~~C~~~C~~~~g~C~~~C~~g~~~G~~C~ 127 (188)
. .| .+||.|..|+. |..|...|.. .+.|.. |.++| +|..|+
T Consensus 562 ~~~~~C~~~~g~~C~~~G~C~~g~C~C~~~Gy~G~~Ce~-C~~C~~~C~~-~g~Cv~-C~~g~-tG~~C~ 627 (690)
T 3fcs_B 562 TRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEK-CPTCPDACTF-KKECVE-CKKFD-RGALHD 627 (690)
T ss_dssp CCCTTTBCTTSSBTSSSCEEETTEEECCSTTCBSTTSCB-CTTSCCTTTS-CCGGGT-TTTTC-CSSSSS
T ss_pred CCCCcccCCCCCCCCCCCEEeCCEEECCCCCccCCCcCc-CCCCCCCCCC-CCCccc-CCCCC-ccCCCC
Confidence 0 23 45555555543 2212233322 356765 89999 999654
No 14
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.10 E-value=2e-11 Score=90.87 Aligned_cols=86 Identities=26% Similarity=0.580 Sum_probs=65.4
Q ss_pred CCCCCCC------CeEec--ceEe-CCCCCcCCCCCCCCCCCCCCCCCC-------CCccCCCC-CCCCCcEecC-CCce
Q psy18122 9 SIECLNG------GVEMD--SMCL-CTPGFAGKKCEIPCDRNNFGHKCS-------MLCSKSPN-QCKGMVLCTS-NFGC 70 (188)
Q Consensus 9 ~~~C~~~------g~C~~--~~C~-C~~G~~G~~C~~~C~~g~~G~~C~-------~~C~c~~~-~C~~~g~C~~-~~~C 70 (188)
+.+|.++ +.|.. ++|+ |.++|+|.+|++ |.+||||..+. ..|.|... .-.+.+.|+. ++.|
T Consensus 55 ~C~C~~~~~~~~~~~C~~~tG~C~~C~~g~~G~~Ce~-C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C 133 (162)
T 1klo_A 55 PCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDR-CKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQC 133 (162)
T ss_dssp ECCSTTCBCTTCSCCBCTTTCCBCCBCTTEETTTTCE-ECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCC
T ss_pred eCcCCCCCCcccCCcccCCCCcccCCCCCCcCCCcCc-CchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEe
Confidence 3456665 57865 9995 999999999998 99999999987 34544321 0011237876 7899
Q ss_pred ecCCCCCCCCCCCCCCCCccCCCccC
Q psy18122 71 SCATGYQGEQCLEHCPEDYYGADCKQ 96 (188)
Q Consensus 71 ~C~~g~~G~~C~~~C~~g~~G~~C~~ 96 (188)
.|+++|+|.+|+ .|++||||..+..
T Consensus 134 ~C~~g~~G~~Cd-~C~~g~~g~~~~~ 158 (162)
T 1klo_A 134 QCLPHVSGRDCG-TCDPGYYNLQSGQ 158 (162)
T ss_dssp CBCTTEESTTCC-EECTTCBCGGGSS
T ss_pred ECCCCCcCCCCC-CCCCCcccCCCCC
Confidence 999999999998 5999999987643
No 15
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.99 E-value=6.3e-10 Score=99.33 Aligned_cols=72 Identities=31% Similarity=0.603 Sum_probs=47.0
Q ss_pred CCCCCCCeEecceEeCC------CCCcCCCCCC---C-----------------------CCCCCCCCCCC-----CCcc
Q psy18122 10 IECLNGGVEMDSMCLCT------PGFAGKKCEI---P-----------------------CDRNNFGHKCS-----MLCS 52 (188)
Q Consensus 10 ~~C~~~g~C~~~~C~C~------~G~~G~~C~~---~-----------------------C~~g~~G~~C~-----~~C~ 52 (188)
.+|+++|.|..++|.|+ +||.|.+|+. . |.+||+|..|+ ..|.
T Consensus 482 ~~Cs~~G~C~~G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g~C~C~~G~~G~~Cec~~~~~~C~ 561 (687)
T 3k6s_B 482 IICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCL 561 (687)
T ss_dssp CGGGSSEEEETTEEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEETTEEEECTTCCSTTSCSCCSSCTTB
T ss_pred CcCCCCCEEeCCEEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEECCEEEcCCCCcCCCCccCCCCCCCC
Confidence 45999999999999999 9999999972 1 44556666555 1222
Q ss_pred CC-CCCCCCCcEecCCCceecCCCCCCCCCC
Q psy18122 53 KS-PNQCKGMVLCTSNFGCSCATGYQGEQCL 82 (188)
Q Consensus 53 c~-~~~C~~~g~C~~~~~C~C~~g~~G~~C~ 82 (188)
.. ..+|.++|.|.. +.|.|++||+|..|+
T Consensus 562 ~~~g~~Cs~~G~C~~-g~C~C~~Gy~G~~Ce 591 (687)
T 3k6s_B 562 NPRRVECSGRGRCRC-NVCECHSGYQLPLCQ 591 (687)
T ss_dssp CTTCSBTSSSCCBCS-SCBCCSTTCCTTTTC
T ss_pred CCCCCCCCCCCcCCC-CEEECCCCCcCCCCC
Confidence 11 124555566655 556666666666665
No 16
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.99 E-value=5.8e-10 Score=80.98 Aligned_cols=118 Identities=20% Similarity=0.473 Sum_probs=76.3
Q ss_pred CCCCCCCCCCeEec-ceEeCCCCCcCCCCCCCCCCCCCCCCCC--CCccCC-CCCCCCCcEecC---CCceecCCCCCCC
Q psy18122 7 ENSIECLNGGVEMD-SMCLCTPGFAGKKCEIPCDRNNFGHKCS--MLCSKS-PNQCKGMVLCTS---NFGCSCATGYQGE 79 (188)
Q Consensus 7 ~~~~~C~~~g~C~~-~~C~C~~G~~G~~C~~~C~~g~~G~~C~--~~C~c~-~~~C~~~g~C~~---~~~C~C~~g~~G~ 79 (188)
..+.+|.++++|+. ++|.|++||+|.. +.. ..-|..|. ..|.-. ..+|.++++|++ .+.|.|++||+|.
T Consensus 4 ~C~~~C~~~~~C~~~~~C~C~~G~~g~~-~~~---~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~ 79 (143)
T 2bou_A 4 GCARWCPQDSSCVNATACRCNPGFSSFS-EII---TTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPV 79 (143)
T ss_dssp CCCTTCCTTEEESSSSCEEECTTEECSS-SSB---CSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEET
T ss_pred CCcCcCCCCCEEcCCCEEeCCCCCcCcc-ccc---cCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccC
Confidence 34678999999998 9999999999853 110 01122332 233311 127988999986 5779999999998
Q ss_pred CCCCCCCCCccCCCccCC--Cc----ccc--cceecccc--ccccccccCCccCCCCCCCCCC
Q psy18122 80 QCLEHCPEDYYGADCKQK--CG----ECI--DGCDQYTG--VCRGGCTTPYLIRPYCKQPHSY 132 (188)
Q Consensus 80 ~C~~~C~~g~~G~~C~~~--C~----~C~--~~C~~~~g--~C~~~C~~g~~~G~~C~~~c~~ 132 (188)
.++..+. ...+..|... |. +|. +.|.+..+ +|. |++|| .|......|.+
T Consensus 80 ~~~~~~~-~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~--C~~Gy-~g~~~~~~C~~ 138 (143)
T 2bou_A 80 SGAKTFK-NESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCR--CRPGW-KPRHGIPNNQK 138 (143)
T ss_dssp TCCSCBS-SGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEE--CCSSS-CBCTTCCSSBT
T ss_pred cCccccc-cCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEee--CCCCc-ccCCCCccCcc
Confidence 7654322 1223344321 21 154 67776655 698 99999 99988877654
No 17
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.92 E-value=2.4e-12 Score=102.51 Aligned_cols=116 Identities=10% Similarity=-0.024 Sum_probs=85.5
Q ss_pred CCCCCCeEec----ceEeCCCCCcCCCCCCC--------------CCC---CCCCCCCCCCccCCCCCCCCCcEecC---
Q psy18122 11 ECLNGGVEMD----SMCLCTPGFAGKKCEIP--------------CDR---NNFGHKCSMLCSKSPNQCKGMVLCTS--- 66 (188)
Q Consensus 11 ~C~~~g~C~~----~~C~C~~G~~G~~C~~~--------------C~~---g~~G~~C~~~C~c~~~~C~~~g~C~~--- 66 (188)
+|.++|+|++ |+|.|++||+|.+|+.. |.+ .+.|..|+..-.|.+.||.++++|++
T Consensus 39 ~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~ 118 (267)
T 4fbr_A 39 KSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTT 118 (267)
T ss_dssp ECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEE
T ss_pred CcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCc
Confidence 6889999998 89999999999999874 222 24577777544556789999999987
Q ss_pred CCceecCCCCCCCCCCC--------------CCCC---CccCCCccCCCc---c-cc--cceecccc--ccccccccCCc
Q psy18122 67 NFGCSCATGYQGEQCLE--------------HCPE---DYYGADCKQKCG---E-CI--DGCDQYTG--VCRGGCTTPYL 121 (188)
Q Consensus 67 ~~~C~C~~g~~G~~C~~--------------~C~~---g~~G~~C~~~C~---~-C~--~~C~~~~g--~C~~~C~~g~~ 121 (188)
+|+|.|++||+|.+|+. .|.+ .+.|.+|..... . |. ++|..... +|. |++||
T Consensus 119 sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~--Cp~Gf- 195 (267)
T 4fbr_A 119 TYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGE--GPIGF- 195 (267)
T ss_dssp EETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTS--CCEEE-
T ss_pred cEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEe--CCCCc-
Confidence 68899999999999985 1222 234666665411 1 33 67754332 688 99999
Q ss_pred cCCCCCCC
Q psy18122 122 IRPYCKQP 129 (188)
Q Consensus 122 ~G~~C~~~ 129 (188)
+|.+|+..
T Consensus 196 ~G~~c~~~ 203 (267)
T 4fbr_A 196 RGTLTSPD 203 (267)
T ss_dssp EEEEEETT
T ss_pred cccccccc
Confidence 99998863
No 18
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.90 E-value=2e-09 Score=77.85 Aligned_cols=67 Identities=30% Similarity=0.676 Sum_probs=53.2
Q ss_pred CCCCCCCCCCCCeEe-------c----ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---CCce
Q psy18122 5 TNENSIECLNGGVEM-------D----SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---NFGC 70 (188)
Q Consensus 5 ~~~~~~~C~~~g~C~-------~----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~~~C 70 (188)
+++.++||.++|+|+ + +.|.|++||.|..|+... . .|...+|.++++|++ .+.|
T Consensus 53 ~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i----------~--~C~~~~C~~~~~C~~~~g~~~C 120 (143)
T 4d90_A 53 GPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNI----------N--ECEVEPCKNGGICTDLVANYSC 120 (143)
T ss_dssp CTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEEC----------C--TTTTCCSCTTCEEEEETTEEEE
T ss_pred CcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCC----------C--cCCCCCCCCCCEeECCCCCeEe
Confidence 345678899999998 2 799999999999997321 1 233568999999986 4679
Q ss_pred ecCCCCCCCCCCC
Q psy18122 71 SCATGYQGEQCLE 83 (188)
Q Consensus 71 ~C~~g~~G~~C~~ 83 (188)
.|++||+|..|+.
T Consensus 121 ~C~~G~~G~~c~~ 133 (143)
T 4d90_A 121 ECPGEFMGRNCQY 133 (143)
T ss_dssp ECCTTCBSTTSCB
T ss_pred ECCCCCccCCcee
Confidence 9999999999974
No 19
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.90 E-value=3.7e-10 Score=84.51 Aligned_cols=89 Identities=25% Similarity=0.603 Sum_probs=62.1
Q ss_pred ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecCCCceecCCCCCCCCCCC-----------------
Q psy18122 21 SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTSNFGCSCATGYQGEQCLE----------------- 83 (188)
Q Consensus 21 ~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~~~~C~C~~g~~G~~C~~----------------- 83 (188)
+.|.|++||+|..|+..|.+ ...|.++++|...+.|.|++||+|..|+.
T Consensus 17 ~~c~C~~g~~G~~C~~~C~~--------------~~~c~~~g~C~~~g~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~~ 82 (169)
T 2vj2_A 17 SAVTCDDYYYGFGCNKFCRP--------------RDDFFGHYACDQNGNKTCMEGWMGPECNRAICRQGCSPKHGSCKLP 82 (169)
T ss_dssp ----CCTTEETTTTCEECCC--------------EEETTEEEEECSSCCEEECTTEESTTSCEECCCTTCCTTTEECSST
T ss_pred eeeeCCCcCcCCCcccccCC--------------CCCcCCCCEeCCCCeeECCCCCcCCCCCCCCCCCCCCCCCcccCCC
Confidence 67888888888888764442 12467888997778999999999998873
Q ss_pred ---CCCCCccCCCccCCCc--c-cc-cceeccccccccccccCCccCCCCCC
Q psy18122 84 ---HCPEDYYGADCKQKCG--E-CI-DGCDQYTGVCRGGCTTPYLIRPYCKQ 128 (188)
Q Consensus 84 ---~C~~g~~G~~C~~~C~--~-C~-~~C~~~~g~C~~~C~~g~~~G~~C~~ 128 (188)
.|++||.|..|+. |. + |. +.|. ..++|. |.+|| +|..|+.
T Consensus 83 ~~C~C~~G~~G~~C~~-C~~~~~C~~g~C~-~~~~C~--C~~G~-~G~~C~~ 129 (169)
T 2vj2_A 83 GDCRCQYGWQGLYCDK-CIPHPGCVHGICN-EPWQCL--CETNW-GGQLCDK 129 (169)
T ss_dssp TCCEECTTEESSSSCE-ECCCTTCSSEECS-STTCCE--ECTTE-ETTTTCE
T ss_pred CeeECCCCCCCCCccc-CCCCCCCCCCCcC-CCCEEe--CCCCC-CCCcccC
Confidence 3567888887763 32 1 44 5565 356788 88999 8888874
No 20
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.85 E-value=2.1e-09 Score=77.34 Aligned_cols=67 Identities=30% Similarity=0.709 Sum_probs=53.2
Q ss_pred CCCCCCCCCCCCeEec----ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---CCceecCCCCC
Q psy18122 5 TNENSIECLNGGVEMD----SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---NFGCSCATGYQ 77 (188)
Q Consensus 5 ~~~~~~~C~~~g~C~~----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~~~C~C~~g~~ 77 (188)
+++.++||.++++|+. +.|.|++||+|..|+... . .|...+|.++++|.+ .+.|.|++||+
T Consensus 46 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~----------~--~C~~~~C~~~g~C~~~~g~~~C~C~~G~~ 113 (135)
T 2vj3_A 46 NECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNT----------D--ECASSPCLHNGRCLDKINEFQCECPTGFT 113 (135)
T ss_dssp CTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEEC----------C--TTTTCCSTTTCEEEECSSCEEEECCTTEE
T ss_pred ccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecC----------C--cccCCCcCCCCEeECCCCCeEEECCCCCc
Confidence 4456789999999987 799999999999997421 1 233568889999986 46799999999
Q ss_pred CCCCCC
Q psy18122 78 GEQCLE 83 (188)
Q Consensus 78 G~~C~~ 83 (188)
|..|+.
T Consensus 114 G~~C~~ 119 (135)
T 2vj3_A 114 GHLCQV 119 (135)
T ss_dssp SSSSCE
T ss_pred CCccCc
Confidence 998863
No 21
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.83 E-value=2.3e-10 Score=86.73 Aligned_cols=64 Identities=25% Similarity=0.591 Sum_probs=41.4
Q ss_pred CCCCCCCCCCCeEec----ceEeCCCCCcCC---CCCCCCCCCCCCCCCCCCccCC--CCCCCCCcEecCC--------C
Q psy18122 6 NENSIECLNGGVEMD----SMCLCTPGFAGK---KCEIPCDRNNFGHKCSMLCSKS--PNQCKGMVLCTSN--------F 68 (188)
Q Consensus 6 ~~~~~~C~~~g~C~~----~~C~C~~G~~G~---~C~~~C~~g~~G~~C~~~C~c~--~~~C~~~g~C~~~--------~ 68 (188)
...++||.|+ +|++ +.|.|++||+|. .|+.. ..|.-. ..+|.++++|++. +
T Consensus 7 ~~~~~pC~ng-~C~~~~g~~~C~C~~G~~g~~~~~C~~i-----------d~C~~~~~~~~C~~~~~C~~~~~~~~~g~y 74 (186)
T 1z1y_A 7 VTVDTICXNG-QLVQMSNHFXCMCNEGLVHLSENTCEEX-----------NECXXETLGXACGEFGQCIENPDPAQVNMY 74 (186)
T ss_dssp CCTTCCCBTE-EEEECSSCEEEEECTTEEEEETTEEEEC-----------CCCSGGGTTSEEETTEEEEECSSTTSSCSE
T ss_pred cCCCCCCCCC-EeECCCCCeEeECCCCCccCCCCccCCC-----------CcccCCCCCCCCCCCCEeecCCCCcCCCCE
Confidence 4577899865 9987 899999999987 55421 112111 3456666777542 3
Q ss_pred ceecCCCCCCCCC
Q psy18122 69 GCSCATGYQGEQC 81 (188)
Q Consensus 69 ~C~C~~g~~G~~C 81 (188)
.|.|++||+|..+
T Consensus 75 ~C~C~~G~~g~~~ 87 (186)
T 1z1y_A 75 XCGCIEGYTLXED 87 (186)
T ss_dssp EEEECTTEEEETT
T ss_pred ECCCCCCCccCCC
Confidence 4777777776543
No 22
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.82 E-value=2.9e-09 Score=92.74 Aligned_cols=111 Identities=26% Similarity=0.587 Sum_probs=74.5
Q ss_pred ceE-eCCCCCcCCCCCCCCCCCCCCCCCC--------CCccCCCCCCCCCcEecC---------CCceecCCCCCCCCCC
Q psy18122 21 SMC-LCTPGFAGKKCEIPCDRNNFGHKCS--------MLCSKSPNQCKGMVLCTS---------NFGCSCATGYQGEQCL 82 (188)
Q Consensus 21 ~~C-~C~~G~~G~~C~~~C~~g~~G~~C~--------~~C~c~~~~C~~~g~C~~---------~~~C~C~~g~~G~~C~ 82 (188)
+.| .|..+|.|.+|+. |.+++++..+. ..|.|......++..|.. .+.|.|.++|.|..|+
T Consensus 343 g~C~~C~~g~~G~~Ce~-C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~~~~~~~~~~~~C~C~~g~~G~~C~ 421 (525)
T 4aqs_A 343 GVCDNCQHNTMGRNCEQ-CKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCD 421 (525)
T ss_dssp EEEESCCTTEESTTSCE-ECTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCSCBGGGTBCSSCCCBCTTEETTTTC
T ss_pred CcccCCCCCCCCCCccc-ccCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCCCCCCcCCCCCccCCCCCCCCCccc
Confidence 445 5999999999987 99998876543 234443222223333322 3679999999999997
Q ss_pred CCCCCCccCCCccCC--Ccc--cc--------cceeccccccccccccCCccCCCCCCCCCCCCCCC
Q psy18122 83 EHCPEDYYGADCKQK--CGE--CI--------DGCDQYTGVCRGGCTTPYLIRPYCKQPHSYLEESP 137 (188)
Q Consensus 83 ~~C~~g~~G~~C~~~--C~~--C~--------~~C~~~~g~C~~~C~~g~~~G~~C~~~c~~~~~~~ 137 (188)
.|.+||+|..|... |.. |. +.|+..+|+|. |++|| +|.+|++ |++++++.
T Consensus 422 -~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~--C~~g~-~G~~Ce~-C~~G~~g~ 483 (525)
T 4aqs_A 422 -VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCY--CKRLV-TGQRCDQ-CLPQHWGL 483 (525)
T ss_dssp -EECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBC--BCTTC-CSTTTCC---------
T ss_pred -CCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEE--CCCCC-cCCCccc-CCCCccCC
Confidence 69999999877643 322 32 46777788999 99999 9999987 88777654
No 23
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.82 E-value=7.9e-12 Score=99.52 Aligned_cols=80 Identities=14% Similarity=0.097 Sum_probs=61.9
Q ss_pred CCCCCCCCCCCCCeEec----ceEeCCCCCcCCCCCCC--------------CCC---CCCCCCCCCCccCCCCCCCCCc
Q psy18122 4 NTNENSIECLNGGVEMD----SMCLCTPGFAGKKCEIP--------------CDR---NNFGHKCSMLCSKSPNQCKGMV 62 (188)
Q Consensus 4 ~~~~~~~~C~~~g~C~~----~~C~C~~G~~G~~C~~~--------------C~~---g~~G~~C~~~C~c~~~~C~~~g 62 (188)
+.++.+.||.++|+|++ |+|.|++||+|..|+.. |.+ .+.|..|...-.+...+|.+++
T Consensus 99 ~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg 178 (267)
T 4fbr_A 99 NIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGG 178 (267)
T ss_dssp CEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTT
T ss_pred ccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCC
Confidence 34566789999999988 89999999999999874 222 2346666533233367899999
Q ss_pred EecC---CCceecCCCCCCCCCCC
Q psy18122 63 LCTS---NFGCSCATGYQGEQCLE 83 (188)
Q Consensus 63 ~C~~---~~~C~C~~g~~G~~C~~ 83 (188)
+|.+ +|.|.|++||+|..|+.
T Consensus 179 ~C~dg~~~y~C~Cp~Gf~G~~c~~ 202 (267)
T 4fbr_A 179 KTLSGTMTYNGEGPIGFRGTLTSP 202 (267)
T ss_dssp SEEEEEEEETTSCCEEEEEEEEET
T ss_pred EeeCCCCCeEEeCCCCcccccccc
Confidence 9987 68899999999999875
No 24
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.67 E-value=1.1e-08 Score=74.66 Aligned_cols=66 Identities=39% Similarity=0.902 Sum_probs=45.9
Q ss_pred CCCCCCCCCCCCCeEec----ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEe-cC---CCceecCCC
Q psy18122 4 NTNENSIECLNGGVEMD----SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLC-TS---NFGCSCATG 75 (188)
Q Consensus 4 ~~~~~~~~C~~~g~C~~----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C-~~---~~~C~C~~g 75 (188)
.+++.++||.++|+|++ +.|.|++||+|..|+.. +.|...+.+|.+ +| .+ ++.|.|++|
T Consensus 48 ideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~-----------deC~~~~~~C~~--~C~~n~~g~y~C~C~~G 114 (146)
T 1x7a_L 48 GDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELD-----------ATCNIKNGRCKQ--FCKTGADSKVLCSCTTG 114 (146)
T ss_dssp --CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEE-----------CCTTSGGGSCSS--BCCCCSSSCCCCBCCTT
T ss_pred cCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCC-----------ccccCCCCCCcC--CCCCCCCCCEEeEcCCC
Confidence 34567899999999987 89999999999999763 112111223443 56 43 577999999
Q ss_pred CC----CCCCC
Q psy18122 76 YQ----GEQCL 82 (188)
Q Consensus 76 ~~----G~~C~ 82 (188)
|+ |..|+
T Consensus 115 y~l~~dG~~C~ 125 (146)
T 1x7a_L 115 YRLAPDQKSCK 125 (146)
T ss_dssp EEECTTSSSEE
T ss_pred cEeCCCCCcCC
Confidence 98 66665
No 25
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.65 E-value=2.4e-08 Score=67.07 Aligned_cols=32 Identities=31% Similarity=0.716 Sum_probs=26.0
Q ss_pred cCCCCCCCCCcEecC-----CCceecCCCCCCCCCCC
Q psy18122 52 SKSPNQCKGMVLCTS-----NFGCSCATGYQGEQCLE 83 (188)
Q Consensus 52 ~c~~~~C~~~g~C~~-----~~~C~C~~g~~G~~C~~ 83 (188)
.|..+||.++|+|.+ .+.|.|++||+|.+|+.
T Consensus 50 ~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 50 SCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEI 86 (91)
T ss_dssp ECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCB
T ss_pred cccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCCc
Confidence 344678999999974 46799999999999974
No 26
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.63 E-value=1.7e-08 Score=89.31 Aligned_cols=110 Identities=26% Similarity=0.562 Sum_probs=70.3
Q ss_pred CCCCCCCCCCCCCeEec-----ceE-eCCCCCcC--CCCCCCCCCCCCCCCCCCCccCCCCCCCCCc---EecC---CCc
Q psy18122 4 NTNENSIECLNGGVEMD-----SMC-LCTPGFAG--KKCEIPCDRNNFGHKCSMLCSKSPNQCKGMV---LCTS---NFG 69 (188)
Q Consensus 4 ~~~~~~~~C~~~g~C~~-----~~C-~C~~G~~G--~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g---~C~~---~~~ 69 (188)
.+++.++||.++++|+. +.| .|++||+| ..|+.. .+|.-.+..|.+++ +|.+ .+.
T Consensus 3 IDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDi-----------DEC~~~p~~C~~gg~~~~CvNt~gsY~ 71 (634)
T 1yo8_A 3 PDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDL-----------DECALVPDICFSTSKVPRCVNTQPGFH 71 (634)
T ss_dssp -CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBC-----------CTTTTSCCCSCCCSSSCCEEECSSSEE
T ss_pred ccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcccc-----------ccccCCCCcccCCccccceeeccCcee
Confidence 34557889999999986 689 99999998 667532 23322223388888 8976 577
Q ss_pred ee-cCCCCCCCCCCCCC--CCCccCCCccC--CCc----ccc--cceeccc----c--ccccccccCCccC--CCCC
Q psy18122 70 CS-CATGYQGEQCLEHC--PEDYYGADCKQ--KCG----ECI--DGCDQYT----G--VCRGGCTTPYLIR--PYCK 127 (188)
Q Consensus 70 C~-C~~g~~G~~C~~~C--~~g~~G~~C~~--~C~----~C~--~~C~~~~----g--~C~~~C~~g~~~G--~~C~ 127 (188)
|. |++||+|..|+..= ....-+..|.. .|. +|. +.|.+.. + +|. |++|| .| ..|+
T Consensus 72 C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~--C~~Gy-~GdG~~Ce 145 (634)
T 1yo8_A 72 CLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCE--CQTGY-AGDGLICG 145 (634)
T ss_dssp ECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEE--ECTTE-EESSSSEE
T ss_pred cccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeee--ccCCc-cccCcccc
Confidence 98 99999998875100 00001111211 121 254 6776654 3 798 99999 88 6785
No 27
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.62 E-value=1e-08 Score=86.63 Aligned_cols=88 Identities=27% Similarity=0.544 Sum_probs=31.1
Q ss_pred CCCCCC-CeEec----ceEeCCCCCcCCCCCCCCCCCCCCCCCCC------------Cc---cCC---------CCCCCC
Q psy18122 10 IECLNG-GVEMD----SMCLCTPGFAGKKCEIPCDRNNFGHKCSM------------LC---SKS---------PNQCKG 60 (188)
Q Consensus 10 ~~C~~~-g~C~~----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~------------~C---~c~---------~~~C~~ 60 (188)
..|+++ ..|.. +.|.|+.+|+|.+|+. |.++|++..+.. .| .|. ..+|.+
T Consensus 297 C~CnGHas~C~~~~g~~~C~C~~~ttG~~CE~-C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C~n 375 (426)
T 3zyj_B 297 CKCNLHATVCVYDNSKLTCECEHNTTGPDCGK-CKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHCQN 375 (426)
T ss_dssp ECCSSSCSCEEEETTEEEECCCTTEESSSSCE-ECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC----------------
T ss_pred CcCCCchhhcCCCCCCceeeCCCCCcCCCccc-cccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccCCC
Confidence 346655 47775 6899999999999998 999998765431 12 221 245666
Q ss_pred CcEecCCCceecCCCCCCCCCCCCCCCCccCCCccCCCcccc--cceeccccccc
Q psy18122 61 MVLCTSNFGCSCATGYQGEQCLEHCPEDYYGADCKQKCGECI--DGCDQYTGVCR 113 (188)
Q Consensus 61 ~g~C~~~~~C~C~~g~~G~~C~~~C~~g~~G~~C~~~C~~C~--~~C~~~~g~C~ 113 (188)
+++|.+...|.|++||+|..|+ .|. |. ++|+..+|+|.
T Consensus 376 gg~C~~~~~C~C~~G~~G~~Ce--------------~c~-C~~~g~C~~~~Gqc~ 415 (426)
T 3zyj_B 376 GGTCHNNVRCLCPAAYTGILCE--------------KLR-CEEAGSCGSDSGQGA 415 (426)
T ss_dssp -------------------------------------------------------
T ss_pred CCCcCCCCCCcCCCCCcCCCCc--------------CCC-CCCCCcccCCCCccC
Confidence 6666663456666666665554 244 66 78888888887
No 28
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=98.51 E-value=5.2e-08 Score=81.36 Aligned_cols=88 Identities=25% Similarity=0.573 Sum_probs=60.2
Q ss_pred CCCCCCeEe-c-----ceEeCCCCCcCCCCCCCCCCCCCCCCCCC-------CccCCCCCCCCCc-Ee---------c-C
Q psy18122 11 ECLNGGVEM-D-----SMCLCTPGFAGKKCEIPCDRNNFGHKCSM-------LCSKSPNQCKGMV-LC---------T-S 66 (188)
Q Consensus 11 ~C~~~g~C~-~-----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~-------~C~c~~~~C~~~g-~C---------~-~ 66 (188)
.|++++.+. . +.|.|++||.|.+|+. |.++|+|..+.. .|. .=.|..++ .| . .
T Consensus 256 ~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~-C~~gy~~~p~~~g~~~~~~~C~--~C~Cn~~g~~C~~d~~~~~c~~~ 332 (375)
T 4aqt_A 256 KCNGHASECVKNEFDKLMCNCKHNTYGVDCEK-CLPFFNDRPWRRATAESASECL--PCDCNGRSQECYFDPELYRSTGH 332 (375)
T ss_dssp CCTTSCSCEEECTTSCEEECCCTTEESTTSCE-ECTTCCSSCCCCCCSSCCCCCC--CCCGGGSCSCEEECHHHHHHSSC
T ss_pred cCCCCCcccCCCCCCCeeeeCcCCCcCCCccc-CCCCCcCCCCCCCccCCCCCCC--CCcCcCCCCCcccccccCccCCC
Confidence 466666432 2 6789999999999998 999999987531 121 11122221 22 1 1
Q ss_pred CCce-ecCCCCCCCCCCCCCCCCccCCCccCCCcccc
Q psy18122 67 NFGC-SCATGYQGEQCLEHCPEDYYGADCKQKCGECI 102 (188)
Q Consensus 67 ~~~C-~C~~g~~G~~C~~~C~~g~~G~~C~~~C~~C~ 102 (188)
.+.| .|+++|+|.+|+ .|.+||+|......|.+|.
T Consensus 333 ~G~C~~C~~n~~G~~Ce-~C~~Gyyg~~~~~~C~pCa 368 (375)
T 4aqt_A 333 GGHCTNCRDNTDGAKCE-RCRENFFRLGNTEACSPAA 368 (375)
T ss_dssp CEEECSCTTTEESTTSC-EECSSEECCTTCSSCEEC-
T ss_pred CCCCCCCCCCCcCCCCC-CCCcCcccCcCCCCCcCCc
Confidence 4678 599999999998 7999999987665565553
No 29
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.47 E-value=8.1e-08 Score=69.66 Aligned_cols=70 Identities=33% Similarity=0.843 Sum_probs=46.7
Q ss_pred CCCCCCCCCCCCCeEec----ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC----CCceecCCC
Q psy18122 4 NTNENSIECLNGGVEMD----SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS----NFGCSCATG 75 (188)
Q Consensus 4 ~~~~~~~~C~~~g~C~~----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~----~~~C~C~~g 75 (188)
.+++.++||.++|+|++ +.|.|++||+|..|+.... .| ..|.+..+.|.. +|.+ .+.|.|++|
T Consensus 47 id~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~------~c-~~c~~~~~~C~~--~C~~~~g~~y~C~C~~G 117 (142)
T 2c4f_L 47 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKD------DQ-LICVNENGGCEQ--YCSDHTGTKRSCRCHEG 117 (142)
T ss_dssp CCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGG------GC-CSTTTGGGGCSS--EEECCTTSCCEEECCTT
T ss_pred cCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCcc------cc-ccccCCCCCccC--EeECCCCCCEEEECCCC
Confidence 34566789999999987 7999999999999975210 00 012222222322 6764 367999999
Q ss_pred CC----CCCCC
Q psy18122 76 YQ----GEQCL 82 (188)
Q Consensus 76 ~~----G~~C~ 82 (188)
|+ |..|+
T Consensus 118 y~l~~dG~~C~ 128 (142)
T 2c4f_L 118 YSLLADGVSCT 128 (142)
T ss_dssp EEECTTSSCEE
T ss_pred ceECCCCCCCC
Confidence 98 76665
No 30
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.43 E-value=3.2e-08 Score=84.97 Aligned_cols=57 Identities=33% Similarity=0.795 Sum_probs=22.5
Q ss_pred CCCCCCeEec-ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecCCCceecCCCCCCCCCCC
Q psy18122 11 ECLNGGVEMD-SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTSNFGCSCATGYQGEQCLE 83 (188)
Q Consensus 11 ~C~~~g~C~~-~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~~~~C~C~~g~~G~~C~~ 83 (188)
+|.| |+|.. ++|.|++||+|..|+.. . |.. +|.++|+|...+.|.|++||+|..|+.
T Consensus 398 ~C~n-G~C~~~~~C~C~~G~~G~~C~~~------------~--C~~-~C~~~g~C~~~~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 398 LCRN-GYCTPTGKCCCSPGWEGDFCRTA------------K--CEP-ACRHGGVCVRPNKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp HCCS-EEECTTSCEEECTTEESTTSCEE------------C--C------------------------------
T ss_pred CCCC-CccCCCCeECCCCCcCCCcCCcC------------c--CCC-CCCCCCEECCCCEEECCCCcccCCCCC
Confidence 5776 89988 99999999999999742 2 223 788999998878999999999999974
No 31
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.42 E-value=8.5e-08 Score=66.94 Aligned_cols=71 Identities=27% Similarity=0.545 Sum_probs=46.1
Q ss_pred CCCCCCCCC--------CCCCCeEec----ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---C
Q psy18122 3 SNTNENSIE--------CLNGGVEMD----SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---N 67 (188)
Q Consensus 3 ~~~~~~~~~--------C~~~g~C~~----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~ 67 (188)
+.+++.++| |.++|+|++ ++|.|++||+|..|+..-.. ..|......|.+ +|.+ .
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~--------~~C~~~~~~C~~--~C~n~~g~ 74 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSF--------LNCSLDNGGCTH--YCLEEVGW 74 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCS--------SSSSSGGGGCSS--EEEECSSS
T ss_pred ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcC--------CcCcCCCCCCCC--EeECCCCC
Confidence 345666777 999999987 79999999999999753110 122211223433 6765 5
Q ss_pred CceecCCCCCCCCCCC
Q psy18122 68 FGCSCATGYQGEQCLE 83 (188)
Q Consensus 68 ~~C~C~~g~~G~~C~~ 83 (188)
|.|.|++||+|....+
T Consensus 75 y~C~C~~G~~~~~~g~ 90 (114)
T 1aut_L 75 RRCSCAPGYKLGDDLL 90 (114)
T ss_dssp EEEECCTTEEECTTSS
T ss_pred EEeECCCCeeECCCCC
Confidence 7799999998654433
No 32
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.41 E-value=1e-07 Score=73.90 Aligned_cols=63 Identities=32% Similarity=0.687 Sum_probs=48.0
Q ss_pred CCCCCCCCeEecceEeCCCCC------cCCCCCCCCCCCCCCCCCCCCccC-CCCCCCCC--cEecCCCceecCCCCCCC
Q psy18122 9 SIECLNGGVEMDSMCLCTPGF------AGKKCEIPCDRNNFGHKCSMLCSK-SPNQCKGM--VLCTSNFGCSCATGYQGE 79 (188)
Q Consensus 9 ~~~C~~~g~C~~~~C~C~~G~------~G~~C~~~C~~g~~G~~C~~~C~c-~~~~C~~~--g~C~~~~~C~C~~g~~G~ 79 (188)
+.+|+++|+|..++|.|.+|| +|.+|+.. . ..|.- ...+|.++ |+|.. +.|.|.+||+|.
T Consensus 142 ~~~Csg~G~C~~g~C~C~~gw~~~~~~~G~~Ce~~--~--------~~C~~~~g~~C~~~~~G~C~~-g~C~C~~G~~G~ 210 (217)
T 2p28_B 142 SIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECD--T--------INCERYNGQVCGGPGRGLCFC-GKCRCHPGFEGS 210 (217)
T ss_dssp SCBGGGTEEEETTEEEECCCCSTTCCEESTTSCEE--S--------SCSCEETTEETTCTTTEEEET-TEEEECTTEEST
T ss_pred CCCCCCCCEEeCCceECCCCCCCcccEECCCcccC--C--------ccCCCCCCCCCCCCCCcEEeC-CeeECCCCCccC
Confidence 578999999999999999995 77777621 0 12211 12257777 99997 899999999999
Q ss_pred CCC
Q psy18122 80 QCL 82 (188)
Q Consensus 80 ~C~ 82 (188)
.|+
T Consensus 211 ~C~ 213 (217)
T 2p28_B 211 ACQ 213 (217)
T ss_dssp TSC
T ss_pred CcC
Confidence 986
No 33
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.40 E-value=1.5e-07 Score=57.17 Aligned_cols=34 Identities=26% Similarity=0.684 Sum_probs=29.3
Q ss_pred CCCCCCCCCCCCCeEe-----c----ceEeCCCCCcCCCCCCC
Q psy18122 4 NTNENSIECLNGGVEM-----D----SMCLCTPGFAGKKCEIP 37 (188)
Q Consensus 4 ~~~~~~~~C~~~g~C~-----~----~~C~C~~G~~G~~C~~~ 37 (188)
.+++.++||.|+|+|. + +.|.|++||+|.+|+..
T Consensus 8 ~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~ 50 (55)
T 3u7u_G 8 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY 50 (55)
T ss_dssp CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence 4567889999999994 2 89999999999999874
No 34
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.40 E-value=3.3e-08 Score=75.48 Aligned_cols=69 Identities=36% Similarity=0.828 Sum_probs=20.2
Q ss_pred CCCCCCCCCCCCCeEec----ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---CCceecCCCC
Q psy18122 4 NTNENSIECLNGGVEMD----SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---NFGCSCATGY 76 (188)
Q Consensus 4 ~~~~~~~~C~~~g~C~~----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~~~C~C~~g~ 76 (188)
.+++.++||.++|+|+. |.|.|++||+|..|+.... ..|.-.+.+|.+ +|.+ .+.|.|++||
T Consensus 42 ideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~---------deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy 110 (195)
T 1nfu_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTR---------KLCSLDNGDCDQ--FCHEEQNSVVCSCARGY 110 (195)
T ss_dssp ---------------------------------------C---------CGGGTGGGGCSS--EEEEETTEEEEECCTTE
T ss_pred CcccCCCCCCCCCEeECCCCCeeEeCCCCceecccccccc---------ccccCCCCCCCC--EeECCCCCeEEECCCCc
Confidence 34566889999999987 8899999999999975210 112211234654 7765 4779999999
Q ss_pred C----CCCCCC
Q psy18122 77 Q----GEQCLE 83 (188)
Q Consensus 77 ~----G~~C~~ 83 (188)
+ |..|+.
T Consensus 111 ~l~~dG~~C~~ 121 (195)
T 1nfu_B 111 TLADNGKACIP 121 (195)
T ss_dssp EECTTSSCEEE
T ss_pred eeCCCCCcccc
Confidence 8 777753
No 35
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.36 E-value=8.9e-08 Score=69.27 Aligned_cols=77 Identities=21% Similarity=0.552 Sum_probs=57.0
Q ss_pred CCCCCCeEec----ceEeCCCCCcCCCCCCCCCCCCCCCCCCC--CccCCCCCCCCCcEecC---CCceecCCCCCCCCC
Q psy18122 11 ECLNGGVEMD----SMCLCTPGFAGKKCEIPCDRNNFGHKCSM--LCSKSPNQCKGMVLCTS---NFGCSCATGYQGEQC 81 (188)
Q Consensus 11 ~C~~~g~C~~----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~--~C~c~~~~C~~~g~C~~---~~~C~C~~g~~G~~C 81 (188)
+|.+++.|++ +.|.|++||+|..++..+. ...+..|.. +|.-...+|.++++|++ .+.|.|++||+|...
T Consensus 54 ~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~-~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 132 (143)
T 2bou_A 54 SCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFK-NESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHG 132 (143)
T ss_dssp CCCTTEEEEECSSCEEEEECTTEEETTCCSCBS-SGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTT
T ss_pred CCCCCCEEEcCCCCeEeECCCCcccCcCccccc-cCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCC
Confidence 8999999987 8999999999998765322 223445543 33322468999999986 567999999999988
Q ss_pred CCCCCCC
Q psy18122 82 LEHCPED 88 (188)
Q Consensus 82 ~~~C~~g 88 (188)
...|.+.
T Consensus 133 ~~~C~~~ 139 (143)
T 2bou_A 133 IPNNQKD 139 (143)
T ss_dssp CCSSBTT
T ss_pred CccCccC
Confidence 7766653
No 36
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.36 E-value=6.1e-07 Score=50.37 Aligned_cols=33 Identities=45% Similarity=0.873 Sum_probs=28.6
Q ss_pred CCCCCCCCCCCCCeEec----ceEeCCCCCcCCCCCC
Q psy18122 4 NTNENSIECLNGGVEMD----SMCLCTPGFAGKKCEI 36 (188)
Q Consensus 4 ~~~~~~~~C~~~g~C~~----~~C~C~~G~~G~~C~~ 36 (188)
.+++.++||.|+|+|.. +.|.|++||+|..|+.
T Consensus 3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred cccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence 45667899999999987 8999999999999873
No 37
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.35 E-value=5e-08 Score=70.12 Aligned_cols=68 Identities=37% Similarity=0.838 Sum_probs=19.9
Q ss_pred CCCCCCCCCCCCeEec----ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---CCceecCCCCC
Q psy18122 5 TNENSIECLNGGVEMD----SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---NFGCSCATGYQ 77 (188)
Q Consensus 5 ~~~~~~~C~~~g~C~~----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~~~C~C~~g~~ 77 (188)
+++.++||.++|+|++ +.|.|++||+|..|+.... ..|...+.+|.+ +|.+ .+.|.|++||+
T Consensus 43 d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~---------d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 43 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTR---------KLCSLDNGDCDQ--FCHEEQNSVVCSCARGYT 111 (134)
T ss_dssp --------------------------------------C---------CGGGTGGGGCSS--EEEEETTEEEEECCTTEE
T ss_pred CcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCC---------CccccCCCCCCC--EeECCCCCEEEECCCCcE
Confidence 4556789999999987 7899999999999875210 112211234554 7765 46799999999
Q ss_pred ----CCCCCC
Q psy18122 78 ----GEQCLE 83 (188)
Q Consensus 78 ----G~~C~~ 83 (188)
|..|+.
T Consensus 112 l~~~g~~C~~ 121 (134)
T 2vh0_B 112 LADNGKACIP 121 (134)
T ss_dssp ECTTSSCEEE
T ss_pred ECCCCCccCc
Confidence 777753
No 38
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=98.35 E-value=2.2e-07 Score=78.13 Aligned_cols=78 Identities=21% Similarity=0.440 Sum_probs=58.3
Q ss_pred CCCCCCCe-Eec--------ceEeCCCCCcCCCCCCCCCCCCCCCC-----------CCCCccCCCCCCCCCc-Eec---
Q psy18122 10 IECLNGGV-EMD--------SMCLCTPGFAGKKCEIPCDRNNFGHK-----------CSMLCSKSPNQCKGMV-LCT--- 65 (188)
Q Consensus 10 ~~C~~~g~-C~~--------~~C~C~~G~~G~~C~~~C~~g~~G~~-----------C~~~C~c~~~~C~~~g-~C~--- 65 (188)
..|++|+. |.. +.|.|..++.|.+|+. |.+||+|.. | ..|.| .+++ .|.
T Consensus 266 C~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CEr-C~pGy~g~p~~~at~~~~~~C-~pC~C-----nghs~~C~~d~ 338 (403)
T 2y38_A 266 CVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDR-CCPGFNQQPWKPATTDSANEC-QSCNC-----HGHAYDCYYDP 338 (403)
T ss_dssp CCCTTBCSCEEESCTTSTTCEEECCCTTEESSSCCE-ECTTCCSSCCCCCCSSCCCCC-CCCCC-----TTSCSCEEECH
T ss_pred cccCCCccccCCCCCCCccceEeECcCcCcCCCCCC-CCccccCCcccccccCCCccc-ccccc-----CCCCcccccCc
Confidence 46777765 863 5699999999999998 999999873 3 34443 3332 241
Q ss_pred ----------------CCCcee-cCCCCCCCCCCCCCCCCccCCCcc
Q psy18122 66 ----------------SNFGCS-CATGYQGEQCLEHCPEDYYGADCK 95 (188)
Q Consensus 66 ----------------~~~~C~-C~~g~~G~~C~~~C~~g~~G~~C~ 95 (188)
..+.|. |.++++|.+|+ .|.+||+|....
T Consensus 339 ~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CE-rC~~GYyg~p~~ 384 (403)
T 2y38_A 339 EVDRREASQNQDNVYQGGGVCLDCQHHTTGINCE-RCLPGFFRAPDQ 384 (403)
T ss_dssp HHHHTTCCCCTTSCSCCCEEESSCCSSEESTTSC-EECTTCEECTTS
T ss_pred ccccccccccccccCCCCCCCCCCcCcCcCCCCC-cCCCCccCCCCC
Confidence 146795 99999999998 699999986654
No 39
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.34 E-value=4e-08 Score=71.48 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=23.9
Q ss_pred CCCCCCCCCCCCCCeEec----ceEeCCCCCcCCC
Q psy18122 3 SNTNENSIECLNGGVEMD----SMCLCTPGFAGKK 33 (188)
Q Consensus 3 ~~~~~~~~~C~~~g~C~~----~~C~C~~G~~G~~ 33 (188)
+.+++.++||.| |+|++ |.|.|++||+|..
T Consensus 3 dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~ 36 (147)
T 2w86_A 3 DIDECESSPCIN-GVCKNSPGSFICECSSESTLDP 36 (147)
T ss_dssp CCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECT
T ss_pred cCccCcCCCCCC-CEeECCCCCEEeECCCCcccCC
Confidence 345666789986 69987 8999999998764
No 40
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.34 E-value=4.3e-07 Score=73.81 Aligned_cols=68 Identities=31% Similarity=0.749 Sum_probs=49.3
Q ss_pred CCCCCCCCCCCCCCeEec----ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCC-CCCCCCCcEecC---CCceecCC
Q psy18122 3 SNTNENSIECLNGGVEMD----SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKS-PNQCKGMVLCTS---NFGCSCAT 74 (188)
Q Consensus 3 ~~~~~~~~~C~~~g~C~~----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~-~~~C~~~g~C~~---~~~C~C~~ 74 (188)
+.+++.++||.|+|+|.+ +.|.|++||.|..|+..- ++|.-. .++|.+ .|.+ .+.|.|++
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~----------~eC~~~~~~~C~~--~C~~~~g~~~C~C~~ 71 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAK----------NECHPERTDGCQH--FCLPGQESYTCSCAQ 71 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCS----------SSCCTTCTTSCSS--EEECCSSSCEEECCT
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCc----------ccCCCCCCCCCcC--ccccCCCeeEEeccc
Confidence 345678899999999987 889999999999997421 222211 257776 7876 57899999
Q ss_pred CCCCCCCC
Q psy18122 75 GYQGEQCL 82 (188)
Q Consensus 75 g~~G~~C~ 82 (188)
||.|..-.
T Consensus 72 g~~~~~~~ 79 (317)
T 3h5c_B 72 GYRLGEDH 79 (317)
T ss_dssp TEECCTTS
T ss_pred cccccccc
Confidence 99885433
No 41
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.33 E-value=2.2e-07 Score=56.41 Aligned_cols=33 Identities=24% Similarity=0.623 Sum_probs=27.3
Q ss_pred cCCCCCCCCCcEec-----C---CCceecCCCCCCCCCCCC
Q psy18122 52 SKSPNQCKGMVLCT-----S---NFGCSCATGYQGEQCLEH 84 (188)
Q Consensus 52 ~c~~~~C~~~g~C~-----~---~~~C~C~~g~~G~~C~~~ 84 (188)
.|.++||.|+|+|. + .|.|.|++||+|.+|+..
T Consensus 10 eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~ 50 (55)
T 3u7u_G 10 EKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY 50 (55)
T ss_dssp STTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred CCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence 45678999999993 3 578999999999999853
No 42
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.30 E-value=1.8e-07 Score=69.03 Aligned_cols=112 Identities=23% Similarity=0.511 Sum_probs=65.0
Q ss_pred CCCCC-CCCCCCCCeEec----ceEeCCCCCc----CCCCCCCCCCCCCCCCCCCCccCCCCCC--CCCcEecC------
Q psy18122 4 NTNEN-SIECLNGGVEMD----SMCLCTPGFA----GKKCEIPCDRNNFGHKCSMLCSKSPNQC--KGMVLCTS------ 66 (188)
Q Consensus 4 ~~~~~-~~~C~~~g~C~~----~~C~C~~G~~----G~~C~~~C~~g~~G~~C~~~C~c~~~~C--~~~g~C~~------ 66 (188)
.+++. ++||. +++|++ |.|.|++||+ |..|+.. .+ ..|.-...+| .+++.|.+
T Consensus 3 ideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~-~~--------~~C~~~~~~c~~~~~~~C~~~~~~~~ 72 (162)
T 1uzk_A 3 VNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDT-RS--------GNCYLDIRPRGDNGDTACSNEIGVGV 72 (162)
T ss_dssp CCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEECC-CC--------EEEEEEC----------CEEEEEEEE
T ss_pred cccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCC-CC--------CcccCCCcccCCCCCCcccCCcCCcc
Confidence 34443 58997 689987 8999999998 7777642 11 0121111122 23556654
Q ss_pred -CCceecCCCCC-CCCCCC-----------CCCC--CccCCC----ccCC--Cc----ccc-cceecccc--cccccccc
Q psy18122 67 -NFGCSCATGYQ-GEQCLE-----------HCPE--DYYGAD----CKQK--CG----ECI-DGCDQYTG--VCRGGCTT 118 (188)
Q Consensus 67 -~~~C~C~~g~~-G~~C~~-----------~C~~--g~~G~~----C~~~--C~----~C~-~~C~~~~g--~C~~~C~~ 118 (188)
.+.|.|++||. |..|+. .|++ ||.|.. |... |. .|. +.|.+..+ +|. |++
T Consensus 73 ~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~--C~~ 150 (162)
T 1uzk_A 73 SKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCR--CPT 150 (162)
T ss_dssp CHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEE--CCT
T ss_pred cCceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEee--CCC
Confidence 36799999998 777752 3444 887752 2211 21 144 56766544 688 999
Q ss_pred CCccCCCCCC
Q psy18122 119 PYLIRPYCKQ 128 (188)
Q Consensus 119 g~~~G~~C~~ 128 (188)
|| +|..-.+
T Consensus 151 Gy-~g~~d~~ 159 (162)
T 1uzk_A 151 GY-YLNEDTR 159 (162)
T ss_dssp TC-CBCTTTC
T ss_pred Cc-cCCCCCC
Confidence 99 8865443
No 43
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.26 E-value=7.4e-07 Score=58.45 Aligned_cols=63 Identities=25% Similarity=0.619 Sum_probs=44.5
Q ss_pred CCCC-CCCCCCCCeEec----ceEeCCCCCc--CCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---CCceecCC
Q psy18122 5 TNEN-SIECLNGGVEMD----SMCLCTPGFA--GKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---NFGCSCAT 74 (188)
Q Consensus 5 ~~~~-~~~C~~~g~C~~----~~C~C~~G~~--G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~~~C~C~~ 74 (188)
+++. ++||.+ |.|++ +.|.|++||+ |..|+.. +.|.- ..+|.+ ++|.+ .+.|.|++
T Consensus 6 deC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~di-----------deC~~-~~~C~~-~~C~n~~g~y~C~C~~ 71 (82)
T 1emn_A 6 DECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECVDT-----------DECSV-GNPCGN-GTCKNVIGGFECTCEE 71 (82)
T ss_dssp CSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEEEC-----------CGGGT-CCTTSS-SCEEECSSSEEECCSS
T ss_pred ccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccCCc-----------ccccC-CCCCCC-CEeECCCCCEEeECCC
Confidence 4444 488975 89987 8999999997 7777532 22321 456765 48876 57799999
Q ss_pred CCCCCCC
Q psy18122 75 GYQGEQC 81 (188)
Q Consensus 75 g~~G~~C 81 (188)
||+|..-
T Consensus 72 G~~g~~~ 78 (82)
T 1emn_A 72 GFEPGPM 78 (82)
T ss_dssp SSCCCSS
T ss_pred CeEeCCC
Confidence 9988653
No 44
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.18 E-value=8.8e-07 Score=58.55 Aligned_cols=66 Identities=23% Similarity=0.512 Sum_probs=42.8
Q ss_pred CCCCCCCC--CCCCCeEec----ceEeCCCCCc-----CCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---CCc
Q psy18122 4 NTNENSIE--CLNGGVEMD----SMCLCTPGFA-----GKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---NFG 69 (188)
Q Consensus 4 ~~~~~~~~--C~~~g~C~~----~~C~C~~G~~-----G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~~~ 69 (188)
.+++..+| |.+ ++|++ +.|.|++||+ |..|+.. ++|.-.+..|. +++|.+ .+.
T Consensus 3 ideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~di-----------deC~~~~~~C~-~~~C~n~~g~y~ 69 (86)
T 1lmj_A 3 IDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDI-----------DECQRDPLLCR-GGVCHNTEGSYR 69 (86)
T ss_dssp CCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEEC-----------CHHHHCSSTTT-TSEEEEETTEEE
T ss_pred cccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCc-----------ccccCCCCcCC-CCEeEcCCCCEE
Confidence 34554444 965 58987 8999999998 5555421 22321222365 468876 577
Q ss_pred eecCCCCCCCCCC
Q psy18122 70 CSCATGYQGEQCL 82 (188)
Q Consensus 70 C~C~~g~~G~~C~ 82 (188)
|.|++||++..-.
T Consensus 70 C~C~~G~~~~~~~ 82 (86)
T 1lmj_A 70 CECPPGHQLSPNI 82 (86)
T ss_dssp EESCTTSCCCSSS
T ss_pred EECcCCcccCCCC
Confidence 9999999886543
No 45
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.14 E-value=4.8e-07 Score=77.64 Aligned_cols=56 Identities=30% Similarity=0.845 Sum_probs=23.0
Q ss_pred CCCCCcEecCCCceecCCCCCCCCCCC-CCCCCccCCCccCCCcccc--cceeccccccccccccCCccCCCCCCC
Q psy18122 57 QCKGMVLCTSNFGCSCATGYQGEQCLE-HCPEDYYGADCKQKCGECI--DGCDQYTGVCRGGCTTPYLIRPYCKQP 129 (188)
Q Consensus 57 ~C~~~g~C~~~~~C~C~~g~~G~~C~~-~C~~g~~G~~C~~~C~~C~--~~C~~~~g~C~~~C~~g~~~G~~C~~~ 129 (188)
+|.+ |+|...+.|.|++||+|..|+. .|. .+ |. ++|... ..|. |.+|| +|..|+..
T Consensus 398 ~C~n-G~C~~~~~C~C~~G~~G~~C~~~~C~---------~~---C~~~g~C~~~-~~C~--C~~G~-~G~~C~~~ 456 (463)
T 2wg3_C 398 LCRN-GYCTPTGKCCCSPGWEGDFCRTAKCE---------PA---CRHGGVCVRP-NKCL--CKKGY-LGPQCEQV 456 (463)
T ss_dssp HCCS-EEECTTSCEEECTTEESTTSCEECC----------------------------------------------
T ss_pred CCCC-CccCCCCeECCCCCcCCCcCCcCcCC---------CC---CCCCCEECCC-CEEE--CCCCc-ccCCCCCC
Confidence 5776 7998878999999999999963 332 21 55 677653 6899 99999 99999873
No 46
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.04 E-value=4.5e-07 Score=63.62 Aligned_cols=68 Identities=25% Similarity=0.556 Sum_probs=43.2
Q ss_pred CCCCCCCCCCCCCCCCeEec-----ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC--CCceecC
Q psy18122 1 MTSNTNENSIECLNGGVEMD-----SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS--NFGCSCA 73 (188)
Q Consensus 1 ~~~~~~~~~~~C~~~g~C~~-----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~--~~~C~C~ 73 (188)
|+..+++.++||.+ +|++ ++|.|++||+|..++.. .|... |..++|. +.|.+ .+.|.|+
T Consensus 1 ~~dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~--------~C~~~--C~~~~C~--~~C~~~~~y~C~C~ 66 (118)
T 1dx5_I 1 VEPVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPH--------RCQMF--CNQTACP--ADCDPNTQASCECP 66 (118)
T ss_dssp CCCCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTEEE--------EEEEC--CCSSEEE--CEECTTSTTCEECC
T ss_pred CCccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCCCC--------ccccc--cCCCCCC--CcccCCCCeEeECC
Confidence 45566677889984 8875 78999999999854321 11111 1223343 35544 5778888
Q ss_pred CCCC---CCCCC
Q psy18122 74 TGYQ---GEQCL 82 (188)
Q Consensus 74 ~g~~---G~~C~ 82 (188)
+||+ |..|+
T Consensus 67 ~Gy~~~~g~~C~ 78 (118)
T 1dx5_I 67 EGYILDDGFICT 78 (118)
T ss_dssp TTEEEETTTEEE
T ss_pred CCccCCCCCccc
Confidence 8888 77774
No 47
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.04 E-value=5.9e-07 Score=67.70 Aligned_cols=66 Identities=17% Similarity=0.381 Sum_probs=49.2
Q ss_pred CCCCCCCCCCCeEe----c----ceEeCCCCCcC-----CCCCCCCCCCCCCCCCCCCccCCCCCC-CCCcEecC---CC
Q psy18122 6 NENSIECLNGGVEM----D----SMCLCTPGFAG-----KKCEIPCDRNNFGHKCSMLCSKSPNQC-KGMVLCTS---NF 68 (188)
Q Consensus 6 ~~~~~~C~~~g~C~----~----~~C~C~~G~~G-----~~C~~~C~~g~~G~~C~~~C~c~~~~C-~~~g~C~~---~~ 68 (188)
++...||.++|+|+ . +.|.|++||+| ..|+.. ....|. .+| .++++|++ .+
T Consensus 93 ~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~-----------~~~~C~-~~C~~~~~~C~n~~g~y 160 (186)
T 1z1y_A 93 VCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT-----------GETACQ-LXCNTDNEVCXNVEGVY 160 (186)
T ss_dssp GGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE-----------ECCCCC-CCCCTTTEEEEEETTEE
T ss_pred cCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEc-----------CCCccc-ccccccCcceecCCCCe
Confidence 44567899999998 4 79999999998 555431 011222 378 88899986 46
Q ss_pred ceecCCCCCCCCCCC
Q psy18122 69 GCSCATGYQGEQCLE 83 (188)
Q Consensus 69 ~C~C~~g~~G~~C~~ 83 (188)
.|.|++||+|..++.
T Consensus 161 ~C~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 161 XCQCMEGFTFDXEXN 175 (186)
T ss_dssp EEEECTTCEEETTTT
T ss_pred eeECCCCCccCcccc
Confidence 799999999988874
No 48
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.00 E-value=5.3e-06 Score=48.03 Aligned_cols=26 Identities=46% Similarity=1.163 Sum_probs=23.8
Q ss_pred CCCCCCeEe--c----ceEeCCCCCcCCCCCC
Q psy18122 11 ECLNGGVEM--D----SMCLCTPGFAGKKCEI 36 (188)
Q Consensus 11 ~C~~~g~C~--~----~~C~C~~G~~G~~C~~ 36 (188)
||.|+|+|. . +.|.|++||+|.+|+.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 999999997 3 8999999999999975
No 49
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.98 E-value=8.7e-06 Score=48.82 Aligned_cols=33 Identities=39% Similarity=0.842 Sum_probs=27.4
Q ss_pred CCCCCC---CCCCCCeEe--c----ceEeCCCCCcCCCCCCC
Q psy18122 5 TNENSI---ECLNGGVEM--D----SMCLCTPGFAGKKCEIP 37 (188)
Q Consensus 5 ~~~~~~---~C~~~g~C~--~----~~C~C~~G~~G~~C~~~ 37 (188)
+++.++ ||.|+|+|. . +.|.|++||+|.+|+..
T Consensus 4 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 45 (53)
T 1egf_A 4 PGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTR 45 (53)
T ss_dssp CCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCC
T ss_pred ccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCcc
Confidence 344454 999999998 4 88999999999999874
No 50
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.98 E-value=4.2e-06 Score=48.76 Aligned_cols=26 Identities=35% Similarity=0.816 Sum_probs=23.6
Q ss_pred CCCCCCCeEec------ceEeCCCCCcCCCCCC
Q psy18122 10 IECLNGGVEMD------SMCLCTPGFAGKKCEI 36 (188)
Q Consensus 10 ~~C~~~g~C~~------~~C~C~~G~~G~~C~~ 36 (188)
+||.| |+|.. +.|.|++||+|.+|+.
T Consensus 12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred CCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 89999 89973 7899999999999986
No 51
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.90 E-value=4.8e-06 Score=55.07 Aligned_cols=62 Identities=29% Similarity=0.601 Sum_probs=42.3
Q ss_pred CCCCCCCC--CCCCCeEec----ceEeCCCCCc----CCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---CCce
Q psy18122 4 NTNENSIE--CLNGGVEMD----SMCLCTPGFA----GKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---NFGC 70 (188)
Q Consensus 4 ~~~~~~~~--C~~~g~C~~----~~C~C~~G~~----G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~~~C 70 (188)
.+++..+| | ++++|.+ +.|.|++||+ |..|+.. .+| ..++|. ++|.+ +|.|
T Consensus 3 ideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~di-----------deC--~~~~C~--~~C~n~~g~y~C 66 (87)
T 1z6c_A 3 VDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDI-----------DEC--SENMCA--QLCVNYPGGYTC 66 (87)
T ss_dssp SCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECC-----------CHH--HHSCCS--SEECCCSSSCCE
T ss_pred cccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCc-----------Cee--CCCCCC--CEEEccCCCEEE
Confidence 34555555 8 7889987 8899999998 6666432 223 245675 57876 5889
Q ss_pred ecCCCCCCCCCC
Q psy18122 71 SCATGYQGEQCL 82 (188)
Q Consensus 71 ~C~~g~~G~~C~ 82 (188)
.|+ +|.|..++
T Consensus 67 ~C~-g~~G~~~~ 77 (87)
T 1z6c_A 67 YCD-GKKGFKLA 77 (87)
T ss_dssp ECC-SSSCCBCC
T ss_pred ECC-CCcCCccc
Confidence 997 77776654
No 52
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.87 E-value=6.4e-06 Score=59.85 Aligned_cols=72 Identities=28% Similarity=0.633 Sum_probs=46.2
Q ss_pred CCCCCccCCCCCCCCCcEecC---CCceecCCCCCCCCCCC--CCCCCccCCCccCCCcccccce-ecccc--ccccccc
Q psy18122 46 KCSMLCSKSPNQCKGMVLCTS---NFGCSCATGYQGEQCLE--HCPEDYYGADCKQKCGECIDGC-DQYTG--VCRGGCT 117 (188)
Q Consensus 46 ~C~~~C~c~~~~C~~~g~C~~---~~~C~C~~g~~G~~C~~--~C~~g~~G~~C~~~C~~C~~~C-~~~~g--~C~~~C~ 117 (188)
.|...-.|..+||.++++|++ .+.|.|++||+|..|+. .|... ... |...| .+..| .|. |+
T Consensus 44 ~c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~deC~~~--------~~~-C~~~C~~n~~g~y~C~--C~ 112 (146)
T 1x7a_L 44 QYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIK--------NGR-CKQFCKTGADSKVLCS--CT 112 (146)
T ss_dssp ------CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEECCTTSG--------GGS-CSSBCCCCSSSCCCCB--CC
T ss_pred cCCCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCCccccCC--------CCC-CcCCCCCCCCCCEEeE--cC
Confidence 344433455789999999986 57799999999999974 23321 011 32445 44333 798 99
Q ss_pred cCCcc----CCCCCCC
Q psy18122 118 TPYLI----RPYCKQP 129 (188)
Q Consensus 118 ~g~~~----G~~C~~~ 129 (188)
+|| . |..|+..
T Consensus 113 ~Gy-~l~~dG~~C~~~ 127 (146)
T 1x7a_L 113 TGY-RLAPDQKSCKPA 127 (146)
T ss_dssp TTE-EECTTSSSEEEC
T ss_pred CCc-EeCCCCCcCCCC
Confidence 999 8 7888753
No 53
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.82 E-value=8.7e-06 Score=48.89 Aligned_cols=30 Identities=33% Similarity=0.821 Sum_probs=26.5
Q ss_pred CCCCCCCCCeEe--c----ceEeCCCCCcCCCCCCC
Q psy18122 8 NSIECLNGGVEM--D----SMCLCTPGFAGKKCEIP 37 (188)
Q Consensus 8 ~~~~C~~~g~C~--~----~~C~C~~G~~G~~C~~~ 37 (188)
.++||.|+|+|. + +.|.|++||+|.+|+..
T Consensus 10 ~~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 10 HDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp TCCEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 468999999997 3 89999999999999874
No 54
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.76 E-value=2.4e-05 Score=52.18 Aligned_cols=72 Identities=21% Similarity=0.405 Sum_probs=48.3
Q ss_pred CCCCCCCCCCCCCccCCCCCCCCCcEecCCCceecCCCCCCCCCC-C---CCCCCccCCCccCCCcccc--cceeccc--
Q psy18122 38 CDRNNFGHKCSMLCSKSPNQCKGMVLCTSNFGCSCATGYQGEQCL-E---HCPEDYYGADCKQKCGECI--DGCDQYT-- 109 (188)
Q Consensus 38 C~~g~~G~~C~~~C~c~~~~C~~~g~C~~~~~C~C~~g~~G~~C~-~---~C~~g~~G~~C~~~C~~C~--~~C~~~~-- 109 (188)
|.+||.|..|.. -.+...||.++. ..+.|.|++||+ .|+ . .|... +|. +.|....
T Consensus 6 C~~g~~g~~c~~-~~c~~~pC~n~~---~~y~C~C~~G~~--~C~~~~~~~C~~~-----------pC~ngg~C~~~~~~ 68 (91)
T 1tpg_A 6 CRDEKTQMIYQQ-HQSWLRPVLRSN---RVEYCWCNSGRA--QCHSVPVKSCSEP-----------RCFNGGTCQQALYF 68 (91)
T ss_dssp CBCSSSCCBCCS-SCEEEEECSSSS---CEEEEECSSSCC--BCCEECEEECSSC-----------CSCTTCEEEEESSS
T ss_pred CCCCCcCCeECC-CcccCCccccCC---CCcEeECCCCCc--ccccCcCCcccCC-----------CCCCCCEeecCCCC
Confidence 889999988852 223345666542 247799999997 664 1 23221 254 6776543
Q ss_pred --cccccccccCCccCCCCCCC
Q psy18122 110 --GVCRGGCTTPYLIRPYCKQP 129 (188)
Q Consensus 110 --g~C~~~C~~g~~~G~~C~~~ 129 (188)
..|. |++|| +|.+|+..
T Consensus 69 ~~~~C~--C~~G~-~G~~Ce~~ 87 (91)
T 1tpg_A 69 SDFVCQ--CPEGF-AGKSCEID 87 (91)
T ss_dssp SCEEEE--CCTTC-BSSSCCBC
T ss_pred CCeEeE--CCCCC-cCCcCCcC
Confidence 3799 99999 99999863
No 55
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.75 E-value=4.1e-06 Score=63.84 Aligned_cols=71 Identities=23% Similarity=0.599 Sum_probs=20.0
Q ss_pred CCCCccCCCCCCCCCcEecC---CCceecCCCCCCCCCCCC----CCCCccCCCccCCCcccccceecccc--ccccccc
Q psy18122 47 CSMLCSKSPNQCKGMVLCTS---NFGCSCATGYQGEQCLEH----CPEDYYGADCKQKCGECIDGCDQYTG--VCRGGCT 117 (188)
Q Consensus 47 C~~~C~c~~~~C~~~g~C~~---~~~C~C~~g~~G~~C~~~----C~~g~~G~~C~~~C~~C~~~C~~~~g--~C~~~C~ 117 (188)
|...-.|...||.++++|.+ .|.|.|++||+|..|+.. |... ... |...|.+..| .|. |+
T Consensus 39 c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~--------~~~-C~~~C~n~~gsy~C~--C~ 107 (195)
T 1nfu_B 39 YKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLD--------NGD-CDQFCHEEQNSVVCS--CA 107 (195)
T ss_dssp ------------------------------------------CCGGGTG--------GGG-CSSEEEEETTEEEEE--CC
T ss_pred CCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCC--------CCC-CCCEeECCCCCeEEE--CC
Confidence 44333445778999999987 578999999999998742 3221 111 3345655444 699 99
Q ss_pred cCCcc----CCCCCCC
Q psy18122 118 TPYLI----RPYCKQP 129 (188)
Q Consensus 118 ~g~~~----G~~C~~~ 129 (188)
+|| . |..|+..
T Consensus 108 ~Gy-~l~~dG~~C~~~ 122 (195)
T 1nfu_B 108 RGY-TLADNGKACIPT 122 (195)
T ss_dssp TTE-EECTTSSCEEES
T ss_pred CCc-eeCCCCCccccC
Confidence 999 8 8888764
No 56
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.74 E-value=6.3e-06 Score=51.24 Aligned_cols=34 Identities=32% Similarity=0.780 Sum_probs=27.9
Q ss_pred CCCCCCCCCCeEec---------ceEeCCCCCcCCCCCCCCCC
Q psy18122 7 ENSIECLNGGVEMD---------SMCLCTPGFAGKKCEIPCDR 40 (188)
Q Consensus 7 ~~~~~C~~~g~C~~---------~~C~C~~G~~G~~C~~~C~~ 40 (188)
+.++||.|+|+|.. +.|.|++||+|.+|+....+
T Consensus 9 C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~ 51 (63)
T 1hae_A 9 KEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPM 51 (63)
T ss_dssp HHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCS
T ss_pred CCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCc
Confidence 45689999999972 78999999999999865443
No 57
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=97.74 E-value=1e-05 Score=68.03 Aligned_cols=68 Identities=22% Similarity=0.478 Sum_probs=52.2
Q ss_pred CceecCCCCCCCCCCCCCCCCccCC-----------CccCCCcccc---ccee------------------ccccccccc
Q psy18122 68 FGCSCATGYQGEQCLEHCPEDYYGA-----------DCKQKCGECI---DGCD------------------QYTGVCRGG 115 (188)
Q Consensus 68 ~~C~C~~g~~G~~C~~~C~~g~~G~-----------~C~~~C~~C~---~~C~------------------~~~g~C~~~ 115 (188)
+.|.|..+++|.+|+ .|.+||+|. .|. +|. |. ..|. ..+|+|..
T Consensus 286 g~C~C~hnT~G~~CE-rC~pGy~g~p~~~at~~~~~~C~-pC~-Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~- 361 (403)
T 2y38_A 286 LQCACQHNTCGGSCD-RCCPGFNQQPWKPATTDSANECQ-SCN-CHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLD- 361 (403)
T ss_dssp EEECCCTTEESSSCC-EECTTCCSSCCCCCCSSCCCCCC-CCC-CTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESS-
T ss_pred eEeECcCcCcCCCCC-CCCccccCCcccccccCCCcccc-ccc-cCCCCcccccCcccccccccccccccCCCCCCCCC-
Confidence 459999999999999 699999985 453 455 66 3462 24678943
Q ss_pred cccCCccCCCCCCCCCCCCCCCeeec
Q psy18122 116 CTTPYLIRPYCKQPHSYLEESPRVLD 141 (188)
Q Consensus 116 C~~g~~~G~~C~~~c~~~~~~~~~~~ 141 (188)
|..++ .|.+|++ |.+++++.....
T Consensus 362 C~~nt-~G~~CEr-C~~GYyg~p~~~ 385 (403)
T 2y38_A 362 CQHHT-TGINCER-CLPGFFRAPDQP 385 (403)
T ss_dssp CCSSE-ESTTSCE-ECTTCEECTTSC
T ss_pred CcCcC-cCCCCCc-CCCCccCCCCCC
Confidence 99999 9999998 988887665544
No 58
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.69 E-value=1.9e-05 Score=44.00 Aligned_cols=29 Identities=28% Similarity=0.813 Sum_probs=24.8
Q ss_pred CCCCCCCCcEecC---CCceecCCCCCCCCCC
Q psy18122 54 SPNQCKGMVLCTS---NFGCSCATGYQGEQCL 82 (188)
Q Consensus 54 ~~~~C~~~g~C~~---~~~C~C~~g~~G~~C~ 82 (188)
...||.++++|.+ .+.|.|++||+|..|+
T Consensus 7 ~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 7 ESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp TTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred CCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 4568999999986 4779999999999886
No 59
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.67 E-value=6.2e-06 Score=51.00 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=27.7
Q ss_pred CCCCCCCCCCC--CeEec----ceEeCCCCCc-CCCCCC
Q psy18122 5 TNENSIECLNG--GVEMD----SMCLCTPGFA-GKKCEI 36 (188)
Q Consensus 5 ~~~~~~~C~~~--g~C~~----~~C~C~~G~~-G~~C~~ 36 (188)
+++.++||.|+ |+|.+ +.|.|++||+ |.+|+.
T Consensus 12 d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 12 AACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp CHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSS
T ss_pred CcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCC
Confidence 44567999999 89987 8999999999 999875
No 60
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.65 E-value=4.2e-05 Score=53.04 Aligned_cols=61 Identities=28% Similarity=0.711 Sum_probs=39.0
Q ss_pred CCCCcEecC---CCceecCCCCCCCCCCCCCCCCccCCCccC-CCcccccceecccc--ccccccccCCccCCCC
Q psy18122 58 CKGMVLCTS---NFGCSCATGYQGEQCLEHCPEDYYGADCKQ-KCGECIDGCDQYTG--VCRGGCTTPYLIRPYC 126 (188)
Q Consensus 58 C~~~g~C~~---~~~C~C~~g~~G~~C~~~C~~g~~G~~C~~-~C~~C~~~C~~~~g--~C~~~C~~g~~~G~~C 126 (188)
|.++++|++ .|.|.|++||+|..|+..-.. ..|.. ... |...|.+..+ +|. |++|| .|...
T Consensus 22 C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~----~~C~~~~~~-C~~~C~n~~g~y~C~--C~~G~-~~~~~ 88 (114)
T 1aut_L 22 CCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSF----LNCSLDNGG-CTHYCLEEVGWRRCS--CAPGY-KLGDD 88 (114)
T ss_dssp TTTSEEECCCSSCCCEEECTTEESTTSCEECCS----SSSSSGGGG-CSSEEEECSSSEEEE--CCTTE-EECTT
T ss_pred CCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcC----CcCcCCCCC-CCCEeECCCCCEEeE--CCCCe-eECCC
Confidence 778999987 578999999999998742110 01111 011 3245655444 698 99999 85433
No 61
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.63 E-value=7.8e-06 Score=58.49 Aligned_cols=73 Identities=21% Similarity=0.538 Sum_probs=18.7
Q ss_pred CCCCccCCCCCCCCCcEecC---CCceecCCCCCCCCCCCCCCCCccCCCccC-CCcccccceecccc--ccccccccCC
Q psy18122 47 CSMLCSKSPNQCKGMVLCTS---NFGCSCATGYQGEQCLEHCPEDYYGADCKQ-KCGECIDGCDQYTG--VCRGGCTTPY 120 (188)
Q Consensus 47 C~~~C~c~~~~C~~~g~C~~---~~~C~C~~g~~G~~C~~~C~~g~~G~~C~~-~C~~C~~~C~~~~g--~C~~~C~~g~ 120 (188)
|...-.|..++|.++++|.+ .+.|.|++||+|..|+..-. ..|.. ... |...|.+..+ .|. |++||
T Consensus 39 c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~-----d~C~~~~~~-C~~~C~~~~g~y~C~--C~~Gy 110 (134)
T 2vh0_B 39 YKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTR-----KLCSLDNGD-CDQFCHEEQNSVVCS--CARGY 110 (134)
T ss_dssp ------------------------------------------C-----CGGGTGGGG-CSSEEEEETTEEEEE--CCTTE
T ss_pred CCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCC-----CccccCCCC-CCCEeECCCCCEEEE--CCCCc
Confidence 43333445678999999986 57899999999998874210 01211 111 3345655444 698 99999
Q ss_pred cc----CCCCCC
Q psy18122 121 LI----RPYCKQ 128 (188)
Q Consensus 121 ~~----G~~C~~ 128 (188)
. |..|+.
T Consensus 111 -~l~~~g~~C~~ 121 (134)
T 2vh0_B 111 -TLADNGKACIP 121 (134)
T ss_dssp -EECTTSSCEEE
T ss_pred -EECCCCCccCc
Confidence 8 888865
No 62
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=97.61 E-value=3.2e-05 Score=47.24 Aligned_cols=31 Identities=39% Similarity=0.727 Sum_probs=26.1
Q ss_pred CCCCCCeEe-----c---ceEeCCCCCcCCCCCCCCCCC
Q psy18122 11 ECLNGGVEM-----D---SMCLCTPGFAGKKCEIPCDRN 41 (188)
Q Consensus 11 ~C~~~g~C~-----~---~~C~C~~G~~G~~C~~~C~~g 41 (188)
||.|+|+|. . +.|.|++||+|.+|+.....+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~~~~ 53 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKEIDN 53 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEECCCC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccCCCC
Confidence 899999997 3 689999999999999754433
No 63
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=97.61 E-value=1.6e-05 Score=66.32 Aligned_cols=64 Identities=17% Similarity=0.386 Sum_probs=48.1
Q ss_pred CceecCCCCCCCCCCCCCCCCccCCCccC----------CCcccc---cc---------eecccccc-ccccccCCccCC
Q psy18122 68 FGCSCATGYQGEQCLEHCPEDYYGADCKQ----------KCGECI---DG---------CDQYTGVC-RGGCTTPYLIRP 124 (188)
Q Consensus 68 ~~C~C~~g~~G~~C~~~C~~g~~G~~C~~----------~C~~C~---~~---------C~~~~g~C-~~~C~~g~~~G~ 124 (188)
+.|.|+++|+|..|+ .|.+||+|..+.. +|. |. .. |...+|+| . |.+++ +|.
T Consensus 272 ~~C~C~~nt~G~~Ce-~C~~gy~~~p~~~g~~~~~~~C~~C~-Cn~~g~~C~~d~~~~~c~~~~G~C~~--C~~n~-~G~ 346 (375)
T 4aqt_A 272 LMCNCKHNTYGVDCE-KCLPFFNDRPWRRATAESASECLPCD-CNGRSQECYFDPELYRSTGHGGHCTN--CRDNT-DGA 346 (375)
T ss_dssp EEECCCTTEESTTSC-EECTTCCSSCCCCCCSSCCCCCCCCC-GGGSCSCEEECHHHHHHSSCCEEECS--CTTTE-EST
T ss_pred eeeeCcCCCcCCCcc-cCCCCCcCCCCCCCccCCCCCCCCCc-CcCCCCCcccccccCccCCCCCCCCC--CCCCC-cCC
Confidence 458999999999998 7999999864321 243 44 22 23456788 5 99999 999
Q ss_pred CCCCCCCCCCCCC
Q psy18122 125 YCKQPHSYLEESP 137 (188)
Q Consensus 125 ~C~~~c~~~~~~~ 137 (188)
+|++ |.+++++.
T Consensus 347 ~Ce~-C~~Gyyg~ 358 (375)
T 4aqt_A 347 KCER-CRENFFRL 358 (375)
T ss_dssp TSCE-ECSSEECC
T ss_pred CCCC-CCcCcccC
Confidence 9987 98887754
No 64
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.49 E-value=5.5e-05 Score=43.62 Aligned_cols=27 Identities=26% Similarity=0.815 Sum_probs=23.2
Q ss_pred CCCCCcEec--C---CCceecCCCCCCCCCCC
Q psy18122 57 QCKGMVLCT--S---NFGCSCATGYQGEQCLE 83 (188)
Q Consensus 57 ~C~~~g~C~--~---~~~C~C~~g~~G~~C~~ 83 (188)
||.++|+|. + .+.|.|++||+|.+|+.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 899999996 3 57799999999999873
No 65
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.47 E-value=2.6e-05 Score=53.59 Aligned_cols=62 Identities=37% Similarity=0.861 Sum_probs=21.3
Q ss_pred CCCCCCCC--CC---eEec----ceEeCCCCCcC---CCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---CCcee
Q psy18122 7 ENSIECLN--GG---VEMD----SMCLCTPGFAG---KKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---NFGCS 71 (188)
Q Consensus 7 ~~~~~C~~--~g---~C~~----~~C~C~~G~~G---~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~~~C~ 71 (188)
++.++|.+ ++ .|.+ +.|.|++||+| ..|+.. ++|. ...+|. ++|.+ .+.|.
T Consensus 27 Cd~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~di-----------deC~-~~~~C~--~~C~n~~gsy~C~ 92 (107)
T 2w2n_E 27 MGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCEDI-----------DECQ-DPDTCS--QLCVNLEGGYKCQ 92 (107)
T ss_dssp BSCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEEC--------------------------------------
T ss_pred CcCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccccc-----------cccC-CCCCcC--CeeecCCCCEEEE
Confidence 45667764 23 7876 89999999998 556531 2222 124564 46765 57899
Q ss_pred cCCCCCCCCCC
Q psy18122 72 CATGYQGEQCL 82 (188)
Q Consensus 72 C~~g~~G~~C~ 82 (188)
|++||.+..-.
T Consensus 93 C~~Gy~~~~d~ 103 (107)
T 2w2n_E 93 CEEGFQLDPHT 103 (107)
T ss_dssp -----------
T ss_pred CCCCceECCCC
Confidence 99999876543
No 66
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.46 E-value=5.2e-05 Score=45.18 Aligned_cols=28 Identities=36% Similarity=0.783 Sum_probs=24.5
Q ss_pred CCCCCCCCeEec--------ceEeCCCCCcCCCCCC
Q psy18122 9 SIECLNGGVEMD--------SMCLCTPGFAGKKCEI 36 (188)
Q Consensus 9 ~~~C~~~g~C~~--------~~C~C~~G~~G~~C~~ 36 (188)
++||.|+|+|.. +.|.|++||+|.+|+.
T Consensus 13 ~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 13 AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 358999999982 6899999999999985
No 67
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.46 E-value=5.7e-05 Score=66.93 Aligned_cols=78 Identities=22% Similarity=0.522 Sum_probs=53.1
Q ss_pred CCCCCCC--CCCCC---eEec----ceEe-CCCCCcCCCCCCC--CCCCCCCCCCC--CCccCCCCCCCCCcEecC----
Q psy18122 5 TNENSIE--CLNGG---VEMD----SMCL-CTPGFAGKKCEIP--CDRNNFGHKCS--MLCSKSPNQCKGMVLCTS---- 66 (188)
Q Consensus 5 ~~~~~~~--C~~~g---~C~~----~~C~-C~~G~~G~~C~~~--C~~g~~G~~C~--~~C~c~~~~C~~~g~C~~---- 66 (188)
+++..+| |.+++ +|+. +.|. |++||+|..|+.. -....-+..|. .+|.-...+|.++++|..
T Consensus 45 DEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~ 124 (634)
T 1yo8_A 45 DECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHF 124 (634)
T ss_dssp CTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTT
T ss_pred ccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccc
Confidence 4455566 99988 8987 8998 9999999988610 00001123344 334323468999999975
Q ss_pred ---CCceecCCCCCC--CCCC
Q psy18122 67 ---NFGCSCATGYQG--EQCL 82 (188)
Q Consensus 67 ---~~~C~C~~g~~G--~~C~ 82 (188)
.+.|.|++||+| ..|+
T Consensus 125 ~~GsY~C~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 125 SDPMYKCECQTGYAGDGLICG 145 (634)
T ss_dssp CSSSEEEEECTTEEESSSSEE
T ss_pred cccceeeeccCCccccCcccc
Confidence 356999999988 6775
No 68
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.38 E-value=0.00017 Score=60.33 Aligned_cols=67 Identities=28% Similarity=0.638 Sum_probs=44.5
Q ss_pred CCCCCCCCCCCeEec----ceEeCCCCCc---CCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---CCceecCCC
Q psy18122 6 NENSIECLNGGVEMD----SMCLCTPGFA---GKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---NFGCSCATG 75 (188)
Q Consensus 6 ~~~~~~C~~~g~C~~----~~C~C~~G~~---G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~~~C~C~~g 75 (188)
++..++|..++.|.+ +.|.|++||. |..|+.. ++|. .+.+|.+ .|.+ ++.|.|++|
T Consensus 2 eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~di-----------deC~-~~~~C~~--~C~n~~g~~~C~C~~g 67 (400)
T 3p5b_L 2 ECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDI-----------DECQ-DPDTCSQ--LCVNLEGGYKCQCEEG 67 (400)
T ss_dssp CTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEEEC-----------CCCS-TTSSCSS--CCBCCSSSCBCCCCTT
T ss_pred cccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCcccCc-----------hhhh-ccCCCCC--ccCCCccceeeecccc
Confidence 445566666779987 8999999998 6777532 2222 1234543 5655 588999999
Q ss_pred CCCCCCCCCCC
Q psy18122 76 YQGEQCLEHCP 86 (188)
Q Consensus 76 ~~G~~C~~~C~ 86 (188)
|.+..-...|.
T Consensus 68 ~~~~~~~~~C~ 78 (400)
T 3p5b_L 68 FQLDPHTKACK 78 (400)
T ss_dssp CCCCTTTSSCC
T ss_pred cccccccccee
Confidence 98765544453
No 69
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.35 E-value=0.00024 Score=42.40 Aligned_cols=28 Identities=29% Similarity=0.929 Sum_probs=24.3
Q ss_pred CCCCCCcEec--C---CCceecCCCCCCCCCCC
Q psy18122 56 NQCKGMVLCT--S---NFGCSCATGYQGEQCLE 83 (188)
Q Consensus 56 ~~C~~~g~C~--~---~~~C~C~~g~~G~~C~~ 83 (188)
+||.++|+|. . .+.|.|++||+|.+|+.
T Consensus 12 ~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 12 GYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp CSSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred CcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence 3899999998 4 57799999999999975
No 70
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.35 E-value=5.5e-05 Score=54.50 Aligned_cols=66 Identities=26% Similarity=0.661 Sum_probs=44.3
Q ss_pred CCCCCCCCCcEecC---CCceecCCCCCCCCCCCCCCCCccCCCccCCCc--c--cccceecccc---ccccccccCCcc
Q psy18122 53 KSPNQCKGMVLCTS---NFGCSCATGYQGEQCLEHCPEDYYGADCKQKCG--E--CIDGCDQYTG---VCRGGCTTPYLI 122 (188)
Q Consensus 53 c~~~~C~~~g~C~~---~~~C~C~~g~~G~~C~~~C~~g~~G~~C~~~C~--~--C~~~C~~~~g---~C~~~C~~g~~~ 122 (188)
|...+|.++++|.+ .+.|.|++||+|..|+....+ |. .|. + |...|.+..+ +|. |++|| +
T Consensus 50 C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~------c~-~c~~~~~~C~~~C~~~~g~~y~C~--C~~Gy-~ 119 (142)
T 2c4f_L 50 CASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDD------QL-ICVNENGGCEQYCSDHTGTKRSCR--CHEGY-S 119 (142)
T ss_dssp GGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGG------CC-STTTGGGGCSSEEECCTTSCCEEE--CCTTE-E
T ss_pred CcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccc------cc-cccCCCCCccCEeECCCCCCEEEE--CCCCc-e
Confidence 34678999999987 467999999999998741000 00 011 0 2235665444 799 99999 8
Q ss_pred ----CCCCCC
Q psy18122 123 ----RPYCKQ 128 (188)
Q Consensus 123 ----G~~C~~ 128 (188)
|..|+.
T Consensus 120 l~~dG~~C~~ 129 (142)
T 2c4f_L 120 LLADGVSCTP 129 (142)
T ss_dssp ECTTSSCEEE
T ss_pred ECCCCCCCCC
Confidence 888865
No 71
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=97.31 E-value=0.00011 Score=58.83 Aligned_cols=64 Identities=27% Similarity=0.591 Sum_probs=45.1
Q ss_pred CCCCCCCeEecceEeCCCCCcCCCCCCCCCCCCCCC-----CCCCCccCCCCCCCCCcEecCCCceecCCCCCC
Q psy18122 10 IECLNGGVEMDSMCLCTPGFAGKKCEIPCDRNNFGH-----KCSMLCSKSPNQCKGMVLCTSNFGCSCATGYQG 78 (188)
Q Consensus 10 ~~C~~~g~C~~~~C~C~~G~~G~~C~~~C~~g~~G~-----~C~~~C~c~~~~C~~~g~C~~~~~C~C~~g~~G 78 (188)
.+|.++|.|..|.|.|.+||.|..|+ |+...... .|... -....|.++|.|.- +.|.|.++|.+
T Consensus 196 ~~C~g~G~~~CG~C~C~~g~~G~~Ce--C~~~~~~~~~~~~~C~~~--~~~~~CSgrG~C~C-G~C~C~~~~~~ 264 (280)
T 2p26_A 196 SLCHGKGFLECGICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKD--NNSIICSGLGDCVC-GQCLCHTSDVP 264 (280)
T ss_dssp TGGGGSEEEETTEEEECTTEESTTSC--EECTTSCHHHHHHTTCSS--TTSCGGGGSEEEET-TEEEECCCSST
T ss_pred CccCCCCeECCCceeCCCCCcCCcce--ecCCccccccccccCCCC--CCCCccCCCceEeC-CeeECcCCCCC
Confidence 34888899999999999999999997 44321100 23211 01235889999998 99999887744
No 72
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.27 E-value=6.5e-05 Score=44.99 Aligned_cols=33 Identities=27% Similarity=0.714 Sum_probs=26.4
Q ss_pred CCCCCCCcEec--C---CCceecCCCCCCCCCCCCCCC
Q psy18122 55 PNQCKGMVLCT--S---NFGCSCATGYQGEQCLEHCPE 87 (188)
Q Consensus 55 ~~~C~~~g~C~--~---~~~C~C~~g~~G~~C~~~C~~ 87 (188)
.++|.++|+|. + .+.|.|++||+|.+|+..-..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~~~ 48 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRDLK 48 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEECSS
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCCcc
Confidence 46899999997 3 467999999999999854333
No 73
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=97.19 E-value=0.00023 Score=50.02 Aligned_cols=53 Identities=32% Similarity=0.661 Sum_probs=38.2
Q ss_pred CCCCCCeEec------c-eEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCC-cEecCCCceecCCCCCCCCCC
Q psy18122 11 ECLNGGVEMD------S-MCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGM-VLCTSNFGCSCATGYQGEQCL 82 (188)
Q Consensus 11 ~C~~~g~C~~------~-~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~-g~C~~~~~C~C~~g~~G~~C~ 82 (188)
||.|+|+|.+ + .|.|++||+|.+|++.-. . +|..+ | ..|++.+..+++|..|+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~---------~-------~C~~g~G---~~YrG~~~~t~sG~~Cq 62 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS---------K-------TCYEGNG---HFYRGKASTDTMGRPCL 62 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS---------C-------CSBCSSC---TTCCSCCCBBTTSCBBC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc---------C-------CCccccc---ccceeeccccccCCccc
Confidence 8999999975 3 899999999999987411 1 12211 1 13778888888888887
No 74
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.18 E-value=0.00017 Score=41.78 Aligned_cols=27 Identities=30% Similarity=0.703 Sum_probs=22.8
Q ss_pred CCCCCCcEecC-----CCceecCCCCCCCCCCC
Q psy18122 56 NQCKGMVLCTS-----NFGCSCATGYQGEQCLE 83 (188)
Q Consensus 56 ~~C~~~g~C~~-----~~~C~C~~g~~G~~C~~ 83 (188)
+||.+ |+|.. .+.|.|++||+|.+|+.
T Consensus 12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred CCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 68999 89973 36799999999999974
No 75
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.13 E-value=0.00058 Score=55.17 Aligned_cols=61 Identities=23% Similarity=0.589 Sum_probs=41.3
Q ss_pred CCCCCCCCCcEecC---CCceecCCCCCCCCCCC---CCCCCccCCCccCCCcccccceecccc--ccccccccCCccCC
Q psy18122 53 KSPNQCKGMVLCTS---NFGCSCATGYQGEQCLE---HCPEDYYGADCKQKCGECIDGCDQYTG--VCRGGCTTPYLIRP 124 (188)
Q Consensus 53 c~~~~C~~~g~C~~---~~~C~C~~g~~G~~C~~---~C~~g~~G~~C~~~C~~C~~~C~~~~g--~C~~~C~~g~~~G~ 124 (188)
|..+||.++++|.+ .+.|.|++||+|..|+. +|.... .. + |...|.+..+ .|. |.+|| .|.
T Consensus 8 C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~-~~----~---C~~~C~~~~g~~~C~--C~~g~-~~~ 76 (317)
T 3h5c_B 8 CISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPER-TD----G---CQHFCLPGQESYTCS--CAQGY-RLG 76 (317)
T ss_dssp TTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTC-TT----S---CSSEEECCSSSCEEE--CCTTE-ECC
T ss_pred CCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCC-CC----C---CcCccccCCCeeEEe--ccccc-ccc
Confidence 34668999999987 57899999999999973 454310 01 1 3234544333 788 99999 764
No 76
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.05 E-value=0.00023 Score=44.01 Aligned_cols=31 Identities=26% Similarity=0.695 Sum_probs=25.5
Q ss_pred CCCCCCCcEecC--------CCceecCCCCCCCCCCCCC
Q psy18122 55 PNQCKGMVLCTS--------NFGCSCATGYQGEQCLEHC 85 (188)
Q Consensus 55 ~~~C~~~g~C~~--------~~~C~C~~g~~G~~C~~~C 85 (188)
.+||.|+|+|.. .+.|.|++||+|.+|+..-
T Consensus 11 ~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i 49 (63)
T 1hae_A 11 KTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV 49 (63)
T ss_dssp HTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEEC
T ss_pred CCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCc
Confidence 568999999972 4679999999999997533
No 77
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=96.99 E-value=0.00087 Score=43.46 Aligned_cols=56 Identities=29% Similarity=0.837 Sum_probs=37.6
Q ss_pred CCCCCCcEecC---CCceecCCCCC--CCCCCC--CCCCCccCCCccCCCcccc-cceecccc--ccccccccCCccCCC
Q psy18122 56 NQCKGMVLCTS---NFGCSCATGYQ--GEQCLE--HCPEDYYGADCKQKCGECI-DGCDQYTG--VCRGGCTTPYLIRPY 125 (188)
Q Consensus 56 ~~C~~~g~C~~---~~~C~C~~g~~--G~~C~~--~C~~g~~G~~C~~~C~~C~-~~C~~~~g--~C~~~C~~g~~~G~~ 125 (188)
.+|.+ +.|.+ .+.|.|++||+ |..|+. +|.. .. +|. +.|.+..+ +|. |++|| .|..
T Consensus 12 ~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~---~~-------~C~~~~C~n~~g~y~C~--C~~G~-~g~~ 77 (82)
T 1emn_A 12 DVCKH-GQCINTDGSYRCECPFGYILAGNECVDTDECSV---GN-------PCGNGTCKNVIGGFECT--CEEGF-EPGP 77 (82)
T ss_dssp TSCSS-SEECCCSSCCCEECCTTEEEETTEEEECCGGGT---CC-------TTSSSCEEECSSSEEEC--CSSSS-CCCS
T ss_pred CCcCC-CEEEecCCCEEEECCCCeECCCCccCCcccccC---CC-------CCCCCEeECCCCCEEeE--CCCCe-EeCC
Confidence 57865 78987 58899999997 877752 2321 01 144 56665554 688 99999 7753
No 78
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.97 E-value=0.00016 Score=60.04 Aligned_cols=64 Identities=27% Similarity=0.578 Sum_probs=16.6
Q ss_pred CCCCCCCCCCCCeEec----ceEeCCCCCc----CCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---CCceecC
Q psy18122 5 TNENSIECLNGGVEMD----SMCLCTPGFA----GKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---NFGCSCA 73 (188)
Q Consensus 5 ~~~~~~~C~~~g~C~~----~~C~C~~G~~----G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~~~C~C~ 73 (188)
+++..+++.....|.. +.|.|++||. |..|+.. .+|. ...+|.+. |.+ ++.|.|+
T Consensus 4 ~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~-----------~eC~-~~~~C~~~--C~~~~g~~~C~C~ 69 (386)
T 3v65_B 4 ENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDV-----------NECA-EEGYCSQG--CTNSEGAFQCWCE 69 (386)
T ss_dssp ------------------------------------------------------------CCTTE--EC-----CCEECC
T ss_pred CcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCcc-----------ceeC-CcCcccCc--CCCCCCCCeEEEC
Confidence 4454455433347765 7899999998 7777532 2222 23466553 765 5889999
Q ss_pred CCCC----CCCCC
Q psy18122 74 TGYQ----GEQCL 82 (188)
Q Consensus 74 ~g~~----G~~C~ 82 (188)
+||. |..|.
T Consensus 70 ~g~~l~~d~~~C~ 82 (386)
T 3v65_B 70 AGYELRPDRRSCK 82 (386)
T ss_dssp TTEEECTTSSCEE
T ss_pred CCceEcCCCCeEC
Confidence 9998 66665
No 79
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.96 E-value=0.00026 Score=43.12 Aligned_cols=32 Identities=25% Similarity=0.706 Sum_probs=25.8
Q ss_pred CCCCCcEec-----C--CCceecCCCCCCCCCCCCCCCC
Q psy18122 57 QCKGMVLCT-----S--NFGCSCATGYQGEQCLEHCPED 88 (188)
Q Consensus 57 ~C~~~g~C~-----~--~~~C~C~~g~~G~~C~~~C~~g 88 (188)
+|.|+|+|. . .+.|.|++||+|.+|+.....+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~~~~ 53 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKEIDN 53 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEECCCC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccCCCC
Confidence 799999997 2 3579999999999998655444
No 80
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.88 E-value=0.00017 Score=52.02 Aligned_cols=26 Identities=19% Similarity=0.590 Sum_probs=18.0
Q ss_pred CCCCCCCcEecC---CCceecCCCCCCCCC
Q psy18122 55 PNQCKGMVLCTS---NFGCSCATGYQGEQC 81 (188)
Q Consensus 55 ~~~C~~~g~C~~---~~~C~C~~g~~G~~C 81 (188)
..||.+ ++|++ +|.|.|++||+|..+
T Consensus 9 ~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~ 37 (147)
T 2w86_A 9 SSPCIN-GVCKNSPGSFICECSSESTLDPT 37 (147)
T ss_dssp GCCSBT-SEEEEETTEEEEECCTTEEECTT
T ss_pred CCCCCC-CEeECCCCCEEeECCCCcccCCC
Confidence 457765 58876 467888888876543
No 81
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=96.87 E-value=0.00071 Score=50.76 Aligned_cols=28 Identities=25% Similarity=0.781 Sum_probs=25.8
Q ss_pred CCCCCCcEecCCCceecCCCCCCCCCCC
Q psy18122 56 NQCKGMVLCTSNFGCSCATGYQGEQCLE 83 (188)
Q Consensus 56 ~~C~~~g~C~~~~~C~C~~g~~G~~C~~ 83 (188)
.+|.|+|.|.....|.|++||+|..|+.
T Consensus 153 ~~C~ngG~Cv~P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 153 GGCRNGGFCNERRICECPDGFHGPHCEG 180 (188)
T ss_dssp TCCCTTCEECTTSCEECCTTCBTTTTCB
T ss_pred CCCCCCCEeCCCCcccCcCCCCCCCCcC
Confidence 5799999999889999999999999984
No 82
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.79 E-value=0.00033 Score=41.59 Aligned_cols=28 Identities=29% Similarity=0.772 Sum_probs=23.3
Q ss_pred CCCCCCcEecC-------CCceecCCCCCCCCCCC
Q psy18122 56 NQCKGMVLCTS-------NFGCSCATGYQGEQCLE 83 (188)
Q Consensus 56 ~~C~~~g~C~~-------~~~C~C~~g~~G~~C~~ 83 (188)
++|.|+|+|.. .+.|.|++||+|.+|+.
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred CcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 37889999973 35799999999999974
No 83
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.76 E-value=0.00013 Score=44.94 Aligned_cols=30 Identities=27% Similarity=0.578 Sum_probs=24.9
Q ss_pred CCCCCCCCC--cEecC---CCceecCCCCC-CCCCC
Q psy18122 53 KSPNQCKGM--VLCTS---NFGCSCATGYQ-GEQCL 82 (188)
Q Consensus 53 c~~~~C~~~--g~C~~---~~~C~C~~g~~-G~~C~ 82 (188)
|.++||.++ |+|.+ .|.|.|++||+ |..|+
T Consensus 14 C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 14 CSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp HHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred CcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence 346789998 89986 47799999999 98886
No 84
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=96.51 E-value=0.0012 Score=57.93 Aligned_cols=33 Identities=39% Similarity=0.703 Sum_probs=29.3
Q ss_pred CCCCCCCCCCCCeEec-----ceEeCC-CCCcCCCCCCC
Q psy18122 5 TNENSIECLNGGVEMD-----SMCLCT-PGFAGKKCEIP 37 (188)
Q Consensus 5 ~~~~~~~C~~~g~C~~-----~~C~C~-~G~~G~~C~~~ 37 (188)
+++.++||.|+|+|.+ +.|.|+ +||+|.+|+..
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 40 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP 40 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence 4577899999999984 889999 99999999973
No 85
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.47 E-value=0.00025 Score=51.95 Aligned_cols=69 Identities=28% Similarity=0.595 Sum_probs=43.8
Q ss_pred CCCeEec--------ceEeCCCCCc-CCCCCC-----------CCCC--CCCCCC----CCC--CccCCCCCCCCCcEec
Q psy18122 14 NGGVEMD--------SMCLCTPGFA-GKKCEI-----------PCDR--NNFGHK----CSM--LCSKSPNQCKGMVLCT 65 (188)
Q Consensus 14 ~~g~C~~--------~~C~C~~G~~-G~~C~~-----------~C~~--g~~G~~----C~~--~C~c~~~~C~~~g~C~ 65 (188)
+++.|+. +.|.|++||. |..|+. .|++ ||.|.. |.. +|.-.+.+|.+ ++|+
T Consensus 60 ~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~ 138 (162)
T 1uzk_A 60 GDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCI 138 (162)
T ss_dssp ----CEEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEE
T ss_pred CCCcccCCcCCcccCceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeE
Confidence 4566754 6799999998 777763 1444 777653 332 33322456875 6998
Q ss_pred C---CCceecCCCCCCCCCCC
Q psy18122 66 S---NFGCSCATGYQGEQCLE 83 (188)
Q Consensus 66 ~---~~~C~C~~g~~G~~C~~ 83 (188)
+ +|.|.|++||+|....+
T Consensus 139 n~~gsy~C~C~~Gy~g~~d~~ 159 (162)
T 1uzk_A 139 NTFGSFQCRCPTGYYLNEDTR 159 (162)
T ss_dssp ECSSCEEEECCTTCCBCTTTC
T ss_pred cCCCCEEeeCCCCccCCCCCC
Confidence 6 67899999999876543
No 86
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.45 E-value=0.0005 Score=58.05 Aligned_cols=62 Identities=23% Similarity=0.678 Sum_probs=25.9
Q ss_pred cEecC---CCceecCCCCCCCCCCCCCCCCccCCCccC------------CCcc--cc----------------cceecc
Q psy18122 62 VLCTS---NFGCSCATGYQGEQCLEHCPEDYYGADCKQ------------KCGE--CI----------------DGCDQY 108 (188)
Q Consensus 62 g~C~~---~~~C~C~~g~~G~~C~~~C~~g~~G~~C~~------------~C~~--C~----------------~~C~~~ 108 (188)
..|.. .+.|.|+++++|..|+ .|.++|++..+.. .|.+ |. ++|...
T Consensus 304 s~C~~~~g~~~C~C~~~ttG~~CE-~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C~ngg~C~~~ 382 (426)
T 3zyj_B 304 TVCVYDNSKLTCECEHNTTGPDCG-KCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHCQNGGTCHNN 382 (426)
T ss_dssp SCEEEETTEEEECCCTTEESSSSC-EECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-----------------------
T ss_pred hhcCCCCCCceeeCCCCCcCCCcc-ccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccCCCCCCcCCC
Confidence 35654 2579999999999998 6999997643321 1322 22 224333
Q ss_pred ccccccccccCCccCCCCCC
Q psy18122 109 TGVCRGGCTTPYLIRPYCKQ 128 (188)
Q Consensus 109 ~g~C~~~C~~g~~~G~~C~~ 128 (188)
. +|. |++|| +|..|+.
T Consensus 383 ~-~C~--C~~G~-~G~~Ce~ 398 (426)
T 3zyj_B 383 V-RCL--CPAAY-TGILCEK 398 (426)
T ss_dssp --------------------
T ss_pred C-CCc--CCCCC-cCCCCcC
Confidence 3 677 99999 9999987
No 87
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=96.30 E-value=0.0035 Score=45.25 Aligned_cols=30 Identities=40% Similarity=0.946 Sum_probs=24.7
Q ss_pred CCCCCCCCCeEec------c-eEeCCCCCcCCCCCCC
Q psy18122 8 NSIECLNGGVEMD------S-MCLCTPGFAGKKCEIP 37 (188)
Q Consensus 8 ~~~~C~~~g~C~~------~-~C~C~~G~~G~~C~~~ 37 (188)
...||.|+|+|.. + .|.|++||.|..|++.
T Consensus 11 ~~cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~ 47 (145)
T 2i9a_A 11 SNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID 47 (145)
T ss_dssp -CCCCCTTCEEEECSSSTTCEEEECCTTEESTTSCEE
T ss_pred CCCCCCCCCCcCCCccccCCccccCCCCCCCCceecc
Confidence 3459999999975 2 7999999999999864
No 88
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.27 E-value=0.013 Score=48.75 Aligned_cols=63 Identities=19% Similarity=0.577 Sum_probs=37.8
Q ss_pred CCCCCcEecC---CCceecCCCCC---CCCCCC--CCCCCccCCCccCCCcccccceecccc--ccccccccCCccCCCC
Q psy18122 57 QCKGMVLCTS---NFGCSCATGYQ---GEQCLE--HCPEDYYGADCKQKCGECIDGCDQYTG--VCRGGCTTPYLIRPYC 126 (188)
Q Consensus 57 ~C~~~g~C~~---~~~C~C~~g~~---G~~C~~--~C~~g~~G~~C~~~C~~C~~~C~~~~g--~C~~~C~~g~~~G~~C 126 (188)
+|..+..|.+ .+.|.|++||. |..|+. +|.. ... |...|.+..| .|. |.+|| .+..-
T Consensus 7 ~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~---~~~-------C~~~C~n~~g~~~C~--C~~g~-~~~~~ 73 (400)
T 3p5b_L 7 NGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQD---PDT-------CSQLCVNLEGGYKCQ--CEEGF-QLDPH 73 (400)
T ss_dssp GGGCSSEEEECSSSEEEECCTTEEECSSSCEEECCCCST---TSS-------CSSCCBCCSSSCBCC--CCTTC-CCCTT
T ss_pred CCCCCCEeECCCCCeEEECCCCCCcCCCCcccCchhhhc---cCC-------CCCccCCCccceeee--ccccc-ccccc
Confidence 3444457865 57799999998 777753 3431 112 3344544433 788 99999 76544
Q ss_pred CCCCCC
Q psy18122 127 KQPHSY 132 (188)
Q Consensus 127 ~~~c~~ 132 (188)
...|..
T Consensus 74 ~~~C~~ 79 (400)
T 3p5b_L 74 TKACKA 79 (400)
T ss_dssp TSSCCC
T ss_pred ccceee
Confidence 444433
No 89
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.22 E-value=0.001 Score=43.43 Aligned_cols=57 Identities=25% Similarity=0.734 Sum_probs=34.7
Q ss_pred CCCCCCcEecC---CCceecCCCCC-----CCCCCCCCCCCccCCCccC-CCcccc-cceecccc--ccccccccCCccC
Q psy18122 56 NQCKGMVLCTS---NFGCSCATGYQ-----GEQCLEHCPEDYYGADCKQ-KCGECI-DGCDQYTG--VCRGGCTTPYLIR 123 (188)
Q Consensus 56 ~~C~~~g~C~~---~~~C~C~~g~~-----G~~C~~~C~~g~~G~~C~~-~C~~C~-~~C~~~~g--~C~~~C~~g~~~G 123 (188)
.+|.+ ++|.+ .+.|.|++||+ |..|+.. ..|.. ++. |. +.|.+..| +|. |++|| .+
T Consensus 11 ~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~di-------deC~~~~~~-C~~~~C~n~~g~y~C~--C~~G~-~~ 78 (86)
T 1lmj_A 11 DLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDI-------DECQRDPLL-CRGGVCHNTEGSYRCE--CPPGH-QL 78 (86)
T ss_dssp STTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEEC-------CHHHHCSST-TTTSEEEEETTEEEEE--SCTTS-CC
T ss_pred CCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCc-------ccccCCCCc-CCCCEeEcCCCCEEEE--CcCCc-cc
Confidence 34755 48876 57799999997 4555310 01111 112 44 56766555 688 99999 76
Q ss_pred C
Q psy18122 124 P 124 (188)
Q Consensus 124 ~ 124 (188)
.
T Consensus 79 ~ 79 (86)
T 1lmj_A 79 S 79 (86)
T ss_dssp C
T ss_pred C
Confidence 5
No 90
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=96.14 E-value=0.0017 Score=56.77 Aligned_cols=33 Identities=30% Similarity=0.718 Sum_probs=29.2
Q ss_pred CCCCCCCCCCCCeEec-----ceEeCC-CCCcCCCCCCC
Q psy18122 5 TNENSIECLNGGVEMD-----SMCLCT-PGFAGKKCEIP 37 (188)
Q Consensus 5 ~~~~~~~C~~~g~C~~-----~~C~C~-~G~~G~~C~~~ 37 (188)
+++.++||.|+|+|.+ +.|.|+ +||+|.+|+..
T Consensus 3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 41 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP 41 (553)
T ss_dssp CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred CcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence 4567899999999987 899999 99999999873
No 91
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.07 E-value=0.025 Score=51.42 Aligned_cols=49 Identities=24% Similarity=0.814 Sum_probs=30.6
Q ss_pred EecC---CCceecCCCCC---CCCCCC--CCCCCccCCCccCCCcccccceecccc--ccccccccCCccCC
Q psy18122 63 LCTS---NFGCSCATGYQ---GEQCLE--HCPEDYYGADCKQKCGECIDGCDQYTG--VCRGGCTTPYLIRP 124 (188)
Q Consensus 63 ~C~~---~~~C~C~~g~~---G~~C~~--~C~~g~~G~~C~~~C~~C~~~C~~~~g--~C~~~C~~g~~~G~ 124 (188)
.|.+ .|.|.|++||. |..|+. +|.. ... |...|.+..| .|. |.+|| ...
T Consensus 325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~---------~~~-C~~~C~n~~gsy~C~--C~~Gy-~l~ 383 (791)
T 3m0c_C 325 VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQD---------PDT-CSQLCVNLEGGYKCQ--CEEGF-QLD 383 (791)
T ss_dssp EEEECSBSEEEECCTTCEEETTTEEECCCCCSS---------SSS-CTTTCCBCSSCBCCC--CCSSE-ECC
T ss_pred cccCCCCCcccCCCCCCccCCCCccccCcccCC---------CCC-CCCeeecCCCCceee--cCCCC-EeC
Confidence 6765 57799999995 777752 3431 111 3344544433 788 99999 653
No 92
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.05 E-value=0.0019 Score=42.30 Aligned_cols=55 Identities=33% Similarity=0.907 Sum_probs=33.6
Q ss_pred CCCCcEecC---CCceecCCCCC----CCCCCC--CCCCCccCCCccCCCcccccceecccc--ccccccccCCccCCCC
Q psy18122 58 CKGMVLCTS---NFGCSCATGYQ----GEQCLE--HCPEDYYGADCKQKCGECIDGCDQYTG--VCRGGCTTPYLIRPYC 126 (188)
Q Consensus 58 C~~~g~C~~---~~~C~C~~g~~----G~~C~~--~C~~g~~G~~C~~~C~~C~~~C~~~~g--~C~~~C~~g~~~G~~C 126 (188)
| ++++|.+ .+.|.|++||+ |..|+. +|..+ + |.+.|.+..+ +|. |+ ++ .|..+
T Consensus 13 C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~--------~---C~~~C~n~~g~y~C~--C~-g~-~G~~~ 76 (87)
T 1z6c_A 13 C-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSEN--------M---CAQLCVNYPGGYTCY--CD-GK-KGFKL 76 (87)
T ss_dssp B-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHS--------C---CSSEECCCSSSCCEE--CC-SS-SCCBC
T ss_pred C-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCC--------C---CCCEEEccCCCEEEE--CC-CC-cCCcc
Confidence 7 6677876 57899999998 666642 12110 1 3355554444 688 87 66 66666
Q ss_pred CC
Q psy18122 127 KQ 128 (188)
Q Consensus 127 ~~ 128 (188)
+.
T Consensus 77 ~~ 78 (87)
T 1z6c_A 77 AQ 78 (87)
T ss_dssp CT
T ss_pred cC
Confidence 54
No 93
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.02 E-value=0.0025 Score=43.55 Aligned_cols=50 Identities=24% Similarity=0.775 Sum_probs=16.2
Q ss_pred EecC---CCceecCCCCCC---CCCCC--CCCCCccCCCccCCCcccccceecccc--ccccccccCCccCCC
Q psy18122 63 LCTS---NFGCSCATGYQG---EQCLE--HCPEDYYGADCKQKCGECIDGCDQYTG--VCRGGCTTPYLIRPY 125 (188)
Q Consensus 63 ~C~~---~~~C~C~~g~~G---~~C~~--~C~~g~~G~~C~~~C~~C~~~C~~~~g--~C~~~C~~g~~~G~~ 125 (188)
.|.+ .+.|.|++||+| ..|+. +|.. ... |.+.|.+..+ .|. |++|| .+..
T Consensus 42 ~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~---~~~-------C~~~C~n~~gsy~C~--C~~Gy-~~~~ 101 (107)
T 2w2n_E 42 VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQD---PDT-------CSQLCVNLEGGYKCQ--CEEGF-QLDP 101 (107)
T ss_dssp EEECCSBSCEEECCTTCEEETTTEEEC----------------------------------------------
T ss_pred EeEeCCCCeEEECCCCccccCCCccccccccCC---CCC-------cCCeeecCCCCEEEE--CCCCc-eECC
Confidence 6765 578999999998 56652 2321 011 3345544433 688 99999 7643
No 94
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=95.91 E-value=0.00061 Score=47.34 Aligned_cols=38 Identities=32% Similarity=0.756 Sum_probs=23.4
Q ss_pred CCCCCcc---CCCccCC--Cc---ccccceecccc--ccccccccCCccCC
Q psy18122 84 HCPEDYY---GADCKQK--CG---ECIDGCDQYTG--VCRGGCTTPYLIRP 124 (188)
Q Consensus 84 ~C~~g~~---G~~C~~~--C~---~C~~~C~~~~g--~C~~~C~~g~~~G~ 124 (188)
.|++||. |..|... |. +|.+.|.+..+ +|. |++|| .|.
T Consensus 64 ~C~~Gy~~~~g~~C~dideC~~~~~C~~~C~n~~g~y~C~--C~~G~-~g~ 111 (118)
T 1dx5_I 64 ECPEGYILDDGFICTDIDECENGGFCSGVCHNLPGTFECI--CGPDS-ALA 111 (118)
T ss_dssp ECCTTEEEETTTEEEECCHHHHCSSCSSEEEECSSSEEEE--ECSSS-SCE
T ss_pred ECCCCccCCCCCccccccccCCCCCCcCeEEeCCCCEEEE--CCCCC-ccC
Confidence 5888998 7777421 21 13355655444 687 88888 653
No 95
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=95.78 E-value=0.026 Score=49.07 Aligned_cols=110 Identities=17% Similarity=0.335 Sum_probs=61.2
Q ss_pred CCCCcEecC-CCceecCCCCC--CCCCCCCCCCCccCCCccC-CCcccc---cceeccccccccccccCCccCCCCC---
Q psy18122 58 CKGMVLCTS-NFGCSCATGYQ--GEQCLEHCPEDYYGADCKQ-KCGECI---DGCDQYTGVCRGGCTTPYLIRPYCK--- 127 (188)
Q Consensus 58 C~~~g~C~~-~~~C~C~~g~~--G~~C~~~C~~g~~G~~C~~-~C~~C~---~~C~~~~g~C~~~C~~g~~~G~~C~--- 127 (188)
|...|.+.. .++|.|.+||. +..|+ .|++|++...... .|..|. ..-......|. |..+| .-..-+
T Consensus 252 C~~dG~w~~p~G~C~C~~G~e~~~~~C~-aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~--C~ng~-~ra~~d~~~ 327 (536)
T 3fl7_A 252 CAVDGEWLVPIGQCLCQAGYEKVEDACQ-ACSPGFFKFEASESPCLECPEHTLPSPEGATSCE--CEEGF-FRAPQDPAS 327 (536)
T ss_dssp ECTTSCBCCCBCCCEECTTEEEETTEEE-ECCTTEECCSCCSSCCEECCSSEECCCTTCSSCE--ECTTC-BCCTTCCTT
T ss_pred EcCCCCEecccCcEeccCccccCCceee-ecCCCCCcccCCCCccccCCCCCCCCCCCccEEE--Eeccc-cccCCCccc
Confidence 555666654 58899999997 66787 6999998765433 255565 22222334799 99988 432221
Q ss_pred CCCCCCCCCCe--eecCccceEEEEEeeeeeccccCCCcceEEEEEeec
Q psy18122 128 QPHSYLEESPR--VLDSSYNAVNLQIDLTTSNIERSYDHTKFYKVQYHK 174 (188)
Q Consensus 128 ~~c~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (188)
..|......|. +...+-.++.+.|+.- .......+..|.+.++.
T Consensus 328 ~~ct~pPsaP~nl~~~vs~tSv~LsW~pP---~~~gG~~i~~Y~V~~~~ 373 (536)
T 3fl7_A 328 MPCTRPPSAPHYLTAVGMGAKVELRWTPP---QDSGGREDIVYSVTCEQ 373 (536)
T ss_dssp SCCBCCCCCBSCEEEECCTTSEEEEECCB---SCCCSCSCCEEEEEEEE
T ss_pred cccccCCCcccceEEEecCCEEEEEEeCC---cCCCCCceeEEEEEEEe
Confidence 12221122332 2234457777888752 11122234556666553
No 96
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=95.65 E-value=0.0084 Score=35.17 Aligned_cols=27 Identities=30% Similarity=0.814 Sum_probs=22.7
Q ss_pred CCCCCCCCeEec------ceEeCCCCCcCCCCCC
Q psy18122 9 SIECLNGGVEMD------SMCLCTPGFAGKKCEI 36 (188)
Q Consensus 9 ~~~C~~~g~C~~------~~C~C~~G~~G~~C~~ 36 (188)
.+.|.|| .|.- ..|.|++||+|.+|+.
T Consensus 13 ~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 13 TQFCFHG-TCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred cCcccCC-EEeeccCCCCeEEECCCCCcccCCCc
Confidence 4678886 8963 7899999999999985
No 97
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=95.38 E-value=0.0025 Score=56.98 Aligned_cols=45 Identities=24% Similarity=0.392 Sum_probs=33.6
Q ss_pred eCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecCCCceecCCCCCCCCCCC
Q psy18122 24 LCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTSNFGCSCATGYQGEQCLE 83 (188)
Q Consensus 24 ~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~~~~C~C~~g~~G~~C~~ 83 (188)
.|.+||.|.+|... ..|. ..|.++|.|.. +.|.|.+||+|..|+.
T Consensus 521 ~C~~gw~g~dc~i~-----------~~Cp---~~C~ghG~C~~-G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 521 DKQQTWAIDNVYIG-----------DGCL---DMCSGHGRCVQ-GSCVCDEQWGGLYCDE 565 (725)
T ss_dssp CTTCCEEEEEEEEE-----------SCSS---GGGGGSEEEET-TEEEECTTEESTTSCE
T ss_pred ccCCCccccccccc-----------CCCC---cccCCCcEECC-CCEeeCCCccCCCcCc
Confidence 56677777766521 2232 36889999998 9999999999999974
No 98
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.35 E-value=0.009 Score=41.74 Aligned_cols=27 Identities=30% Similarity=0.739 Sum_probs=22.2
Q ss_pred CCCCCcEecC-----CC-ceecCCCCCCCCCCC
Q psy18122 57 QCKGMVLCTS-----NF-GCSCATGYQGEQCLE 83 (188)
Q Consensus 57 ~C~~~g~C~~-----~~-~C~C~~g~~G~~C~~ 83 (188)
||.|+|+|.+ .+ .|.|+++|+|..|+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~ 34 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI 34 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCE
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccc
Confidence 6889999965 23 799999999999974
No 99
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=95.35 E-value=0.0083 Score=35.20 Aligned_cols=27 Identities=30% Similarity=0.759 Sum_probs=22.9
Q ss_pred CCCCCCCCeEec------ceEeCCCCCcCCCCCC
Q psy18122 9 SIECLNGGVEMD------SMCLCTPGFAGKKCEI 36 (188)
Q Consensus 9 ~~~C~~~g~C~~------~~C~C~~G~~G~~C~~ 36 (188)
.+.|.| |.|.- ..|.|++||+|.+|+.
T Consensus 13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 13 KHYCIK-GRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp TTSCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred cCcccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 477988 78962 7899999999999986
No 100
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=95.08 E-value=0.013 Score=46.87 Aligned_cols=25 Identities=36% Similarity=0.772 Sum_probs=22.1
Q ss_pred CCCCCcEecCCCceecCCCCCCCCCC
Q psy18122 57 QCKGMVLCTSNFGCSCATGYQGEQCL 82 (188)
Q Consensus 57 ~C~~~g~C~~~~~C~C~~g~~G~~C~ 82 (188)
+|.++|+|.- +.|.|.+||+|..|+
T Consensus 197 ~C~g~G~~~C-G~C~C~~g~~G~~Ce 221 (280)
T 2p26_A 197 LCHGKGFLEC-GICRCDTGYIGKNCE 221 (280)
T ss_dssp GGGGSEEEET-TEEEECTTEESTTSC
T ss_pred ccCCCCeECC-CceeCCCCCcCCcce
Confidence 4777888887 899999999999996
No 101
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.72 E-value=0.12 Score=46.11 Aligned_cols=49 Identities=24% Similarity=0.840 Sum_probs=29.4
Q ss_pred EecC---CCceecCCCCC---CCCCCC--CCCCCccCCCccCCCcccccceecccc--ccccccccCCccCC
Q psy18122 63 LCTS---NFGCSCATGYQ---GEQCLE--HCPEDYYGADCKQKCGECIDGCDQYTG--VCRGGCTTPYLIRP 124 (188)
Q Consensus 63 ~C~~---~~~C~C~~g~~---G~~C~~--~C~~g~~G~~C~~~C~~C~~~C~~~~g--~C~~~C~~g~~~G~ 124 (188)
.|.+ .+.|.|++||. |..|+. +|... .. |...|.+..| +|. |.+|| .+.
T Consensus 307 ~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~---~~-------C~~~C~n~~g~y~C~--C~~G~-~~~ 365 (699)
T 1n7d_A 307 VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDP---DT-------CSQLCVNLEGGYKCQ--CEEGF-QLD 365 (699)
T ss_dssp TCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSS---SS-------CTTTCCBCSSCBCCC--CCSSC-BCC
T ss_pred CcccCCCCcEEeCCCCeEcCCCCcccCccccCCC---Cc-------cccccccCCCCeeee--eeccc-ccC
Confidence 4554 57899999998 556642 34311 11 3344544433 688 99999 753
No 102
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=94.71 E-value=0.0073 Score=43.70 Aligned_cols=31 Identities=29% Similarity=0.680 Sum_probs=25.9
Q ss_pred CCCCCCCCCcEecC---CCceecCCCCCCCCCCC
Q psy18122 53 KSPNQCKGMVLCTS---NFGCSCATGYQGEQCLE 83 (188)
Q Consensus 53 c~~~~C~~~g~C~~---~~~C~C~~g~~G~~C~~ 83 (188)
|...+|.++++|.+ .+.|.|++||.|..|+.
T Consensus 122 c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~ 155 (162)
T 1g1s_A 122 CQDMSCSKQGECLETIGNYTCSCYPGFYGPECEY 155 (162)
T ss_dssp CCTTGGGGSEEEEECSSSEEEEECTTEESTTSCE
T ss_pred CcCCCCCCCCEEecCCCCceEeCCCCCcCccccc
Confidence 34678999999987 57799999999999874
No 103
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=94.45 E-value=0.019 Score=36.89 Aligned_cols=27 Identities=30% Similarity=0.818 Sum_probs=22.2
Q ss_pred CCCCCCCCeEec------ceEeCCCCCcCCCCCC
Q psy18122 9 SIECLNGGVEMD------SMCLCTPGFAGKKCEI 36 (188)
Q Consensus 9 ~~~C~~~g~C~~------~~C~C~~G~~G~~C~~ 36 (188)
.+.|.|| .|.- ..|.|++||+|.+|+.
T Consensus 45 ~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 45 KDFCIHG-ECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TTCCSSE-EECCBGGGTBCCEEECTTEESTTCCE
T ss_pred cCcCCCC-EeeeecCCCCeEEEcCCCcccccccc
Confidence 5778886 8942 7899999999999974
No 104
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.11 E-value=0.044 Score=49.87 Aligned_cols=60 Identities=35% Similarity=0.851 Sum_probs=37.1
Q ss_pred CCCCCCCCCC-----eEec----ceEeCCCCCc---CCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---CCcee
Q psy18122 7 ENSIECLNGG-----VEMD----SMCLCTPGFA---GKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---NFGCS 71 (188)
Q Consensus 7 ~~~~~C~~~g-----~C~~----~~C~C~~G~~---G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~~~C~ 71 (188)
+..++|.++. .|.+ +.|.|++||. |..|+.. .+|. .+.+|.. .|.+ +|.|.
T Consensus 310 C~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~~g~~C~di-----------deC~-~~~~C~~--~C~n~~gsy~C~ 375 (791)
T 3m0c_C 310 CGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDI-----------DECQ-DPDTCSQ--LCVNLEGGYKCQ 375 (791)
T ss_dssp BSCCSTTTGGGGCSSEEEECSBSEEEECCTTCEEETTTEEECC-----------CCCS-SSSSCTT--TCCBCSSCBCCC
T ss_pred cccccccccccCccccccCCCCCcccCCCCCCccCCCCccccC-----------cccC-CCCCCCC--eeecCCCCceee
Confidence 3456776543 6765 8899999995 6777532 1221 1223322 4544 58899
Q ss_pred cCCCCCCCC
Q psy18122 72 CATGYQGEQ 80 (188)
Q Consensus 72 C~~g~~G~~ 80 (188)
|++||.+..
T Consensus 376 C~~Gy~l~~ 384 (791)
T 3m0c_C 376 CEEGFQLDP 384 (791)
T ss_dssp CCSSEECCS
T ss_pred cCCCCEeCC
Confidence 999997643
No 105
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=94.03 E-value=0.015 Score=51.03 Aligned_cols=31 Identities=35% Similarity=0.884 Sum_probs=26.9
Q ss_pred CCCCCCCCCcEecC----CCceecC-CCCCCCCCCC
Q psy18122 53 KSPNQCKGMVLCTS----NFGCSCA-TGYQGEQCLE 83 (188)
Q Consensus 53 c~~~~C~~~g~C~~----~~~C~C~-~g~~G~~C~~ 83 (188)
|.++||.|+|+|.+ .|.|.|+ +||+|..|+.
T Consensus 4 C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 4 CCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp TTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 45779999999984 4779999 9999999985
No 106
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=93.99 E-value=0.046 Score=31.96 Aligned_cols=26 Identities=23% Similarity=0.659 Sum_probs=21.3
Q ss_pred CCCCCCCeEe--c----ceEeCCCCCcCCCCCC
Q psy18122 10 IECLNGGVEM--D----SMCLCTPGFAGKKCEI 36 (188)
Q Consensus 10 ~~C~~~g~C~--~----~~C~C~~G~~G~~C~~ 36 (188)
+.|.| |+|. . ..|.|++||+|.+|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 56776 5997 2 7899999999999975
No 107
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.96 E-value=0.034 Score=32.53 Aligned_cols=28 Identities=29% Similarity=0.702 Sum_probs=21.2
Q ss_pred CCCCCCCcEecC-----CCceecCCCCCCCCCCC
Q psy18122 55 PNQCKGMVLCTS-----NFGCSCATGYQGEQCLE 83 (188)
Q Consensus 55 ~~~C~~~g~C~~-----~~~C~C~~g~~G~~C~~ 83 (188)
.+.|.++ +|.- ...|.|++||+|.+|+.
T Consensus 13 ~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 13 TQFCFHG-TCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred cCcccCC-EEeeccCCCCeEEECCCCCcccCCCc
Confidence 3467776 8863 46799999999999973
No 108
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.74 E-value=0.07 Score=47.68 Aligned_cols=51 Identities=33% Similarity=0.924 Sum_probs=29.7
Q ss_pred ceEeCCCCCc---CCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC---CCceecCCCCCCCCCCCCC
Q psy18122 21 SMCLCTPGFA---GKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS---NFGCSCATGYQGEQCLEHC 85 (188)
Q Consensus 21 ~~C~C~~G~~---G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~---~~~C~C~~g~~G~~C~~~C 85 (188)
+.|.|++||. |..|+.. .+|. ..++|.+ .|.+ +|.|.|++||.+..-...|
T Consensus 315 ~~C~C~~G~~~~~~~~C~di-----------deC~-~~~~C~~--~C~n~~g~y~C~C~~G~~~~~~~~~C 371 (699)
T 1n7d_A 315 YECLCPDGFQLVAQRRCEDI-----------DECQ-DPDTCSQ--LCVNLEGGYKCQCEEGFQLDPHTKAC 371 (699)
T ss_dssp CCCCCCSSSCCCSSSCCCCC-----------CCCS-SSSSCTT--TCCBCSSCBCCCCCSSCBCCSSCCCC
T ss_pred cEEeCCCCeEcCCCCcccCc-----------cccC-CCCcccc--ccccCCCCeeeeeecccccCCCCCcc
Confidence 7788888887 5555431 1221 1234432 4544 5889999999875433334
No 109
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=93.47 E-value=0.048 Score=45.42 Aligned_cols=32 Identities=31% Similarity=0.627 Sum_probs=27.7
Q ss_pred CCCCCCCCCCCeEec----ceEeCCC-CCcCCCCCCC
Q psy18122 6 NENSIECLNGGVEMD----SMCLCTP-GFAGKKCEIP 37 (188)
Q Consensus 6 ~~~~~~C~~~g~C~~----~~C~C~~-G~~G~~C~~~ 37 (188)
.+.++||.|+|.|.+ +.|.|+. +|.|+.|+..
T Consensus 187 ~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 187 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp CCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 456789999999997 8999996 9999999864
No 110
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.36 E-value=0.017 Score=50.47 Aligned_cols=31 Identities=29% Similarity=0.794 Sum_probs=26.6
Q ss_pred CCCCCCCCCcEecC----CCceecC-CCCCCCCCCC
Q psy18122 53 KSPNQCKGMVLCTS----NFGCSCA-TGYQGEQCLE 83 (188)
Q Consensus 53 c~~~~C~~~g~C~~----~~~C~C~-~g~~G~~C~~ 83 (188)
|.++||.|+|+|.+ .+.|.|+ +||+|..|+.
T Consensus 5 C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 5 CCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp GGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 34679999999976 5779999 9999999985
No 111
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=92.46 E-value=0.035 Score=49.64 Aligned_cols=29 Identities=21% Similarity=0.496 Sum_probs=26.3
Q ss_pred CCCCCCCCCeEecceEeCCCCCcCCCCCC
Q psy18122 8 NSIECLNGGVEMDSMCLCTPGFAGKKCEI 36 (188)
Q Consensus 8 ~~~~C~~~g~C~~~~C~C~~G~~G~~C~~ 36 (188)
.+..|.+||.|..|.|+|.+||.|.+|+.
T Consensus 537 Cp~~C~ghG~C~~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 537 CLDMCSGHGRCVQGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp SSGGGGGSEEEETTEEEECTTEESTTSCE
T ss_pred CCcccCCCcEECCCCEeeCCCccCCCcCc
Confidence 44679999999999999999999999985
No 112
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=91.95 E-value=0.037 Score=32.34 Aligned_cols=27 Identities=30% Similarity=0.753 Sum_probs=20.2
Q ss_pred CCCCCCcEec--C---CCceecCCCCCCCCCCC
Q psy18122 56 NQCKGMVLCT--S---NFGCSCATGYQGEQCLE 83 (188)
Q Consensus 56 ~~C~~~g~C~--~---~~~C~C~~g~~G~~C~~ 83 (188)
+.|.+ |+|. . ...|.|++||+|.+|+.
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 45777 6885 1 35699999999999973
No 113
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=91.74 E-value=0.074 Score=38.32 Aligned_cols=31 Identities=39% Similarity=0.892 Sum_probs=25.7
Q ss_pred CCCCCCCCCcEecC---CCceecCCCCCCCCCCC
Q psy18122 53 KSPNQCKGMVLCTS---NFGCSCATGYQGEQCLE 83 (188)
Q Consensus 53 c~~~~C~~~g~C~~---~~~C~C~~g~~G~~C~~ 83 (188)
+...+|.+++.|.+ .+.|.|++||.|..|+.
T Consensus 122 ~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~ 155 (164)
T 3cfw_A 122 CQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQF 155 (164)
T ss_dssp CCTTSSCSSEEEEEETTEEEEEECTTCBSSSSCB
T ss_pred CCCCcCCCCCeecccCCCceeeeCCCcccccccc
Confidence 33578999999985 57799999999999974
No 114
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=91.70 E-value=0.15 Score=42.01 Aligned_cols=53 Identities=38% Similarity=0.977 Sum_probs=14.7
Q ss_pred EecC---CCceecCCCCC----CCCCCC--CCCCCccCCCccCCCcccccceecccc--ccccccccCCcc----CCCCC
Q psy18122 63 LCTS---NFGCSCATGYQ----GEQCLE--HCPEDYYGADCKQKCGECIDGCDQYTG--VCRGGCTTPYLI----RPYCK 127 (188)
Q Consensus 63 ~C~~---~~~C~C~~g~~----G~~C~~--~C~~g~~G~~C~~~C~~C~~~C~~~~g--~C~~~C~~g~~~----G~~C~ 127 (188)
.|.+ .+.|.|++||. |..|+. +|.. ... |...|.+..| +|. |.+|| . |..|+
T Consensus 16 ~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~---~~~-------C~~~C~~~~g~~~C~--C~~g~-~l~~d~~~C~ 82 (386)
T 3v65_B 16 KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAE---EGY-------CSQGCTNSEGAFQCW--CEAGY-ELRPDRRSCK 82 (386)
T ss_dssp ---------------------------------------C-------CTTEEC-----CCEE--CCTTE-EECTTSSCEE
T ss_pred CCcCCCCCcEeECCCCceECCCCCccCccceeCC---cCc-------ccCcCCCCCCCCeEE--ECCCc-eEcCCCCeEC
Confidence 5644 47899999998 777753 3421 011 3333554444 788 99999 7 66776
Q ss_pred C
Q psy18122 128 Q 128 (188)
Q Consensus 128 ~ 128 (188)
.
T Consensus 83 ~ 83 (386)
T 3v65_B 83 A 83 (386)
T ss_dssp E
T ss_pred C
Confidence 4
No 115
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=91.38 E-value=0.14 Score=48.69 Aligned_cols=32 Identities=31% Similarity=0.653 Sum_probs=27.9
Q ss_pred CCCCCCCCCCCeEec----ceEeCC-CCCcCCCCCCC
Q psy18122 6 NENSIECLNGGVEMD----SMCLCT-PGFAGKKCEIP 37 (188)
Q Consensus 6 ~~~~~~C~~~g~C~~----~~C~C~-~G~~G~~C~~~ 37 (188)
.+.++||.|+|+|.. +.|.|+ +||.|+.|+..
T Consensus 1019 ~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1019 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp CCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred ceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence 456789999999987 899999 69999999864
No 116
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=91.26 E-value=0.1 Score=33.44 Aligned_cols=27 Identities=33% Similarity=0.791 Sum_probs=20.6
Q ss_pred CCCCCCCcEecC-----CCceecCCCCCCCCCC
Q psy18122 55 PNQCKGMVLCTS-----NFGCSCATGYQGEQCL 82 (188)
Q Consensus 55 ~~~C~~~g~C~~-----~~~C~C~~g~~G~~C~ 82 (188)
.+.|.++ .|.- .+.|.|++||+|.+|+
T Consensus 45 ~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 45 KDFCIHG-ECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp TTCCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred cCcCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence 3467775 8842 3669999999999997
No 117
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=91.18 E-value=0.065 Score=46.60 Aligned_cols=64 Identities=25% Similarity=0.665 Sum_probs=43.3
Q ss_pred CCCCCCCeEec--ceEeCCCCCc--CCCCCCCCCCCCCCCCCC-CCccCCCCCCCCCcEecC--CCceecCCCCCC
Q psy18122 10 IECLNGGVEMD--SMCLCTPGFA--GKKCEIPCDRNNFGHKCS-MLCSKSPNQCKGMVLCTS--NFGCSCATGYQG 78 (188)
Q Consensus 10 ~~C~~~g~C~~--~~C~C~~G~~--G~~C~~~C~~g~~G~~C~-~~C~c~~~~C~~~g~C~~--~~~C~C~~g~~G 78 (188)
.-|...|.... |.|.|.+||. |..|+. |++|+|..... ..|. +|..+..=.. .+.|.|..+|.-
T Consensus 250 ~~C~~dG~w~~p~G~C~C~~G~e~~~~~C~a-C~~g~~k~~~~~~~C~----~CP~~S~s~~~Gs~~C~C~ng~~r 320 (536)
T 3fl7_A 250 MHCAVDGEWLVPIGQCLCQAGYEKVEDACQA-CSPGFFKFEASESPCL----ECPEHTLPSPEGATSCECEEGFFR 320 (536)
T ss_dssp EEECTTSCBCCCBCCCEECTTEEEETTEEEE-CCTTEECCSCCSSCCE----ECCSSEECCCTTCSSCEECTTCBC
T ss_pred EEEcCCCCEecccCcEeccCccccCCceeee-cCCCCCcccCCCCccc----cCCCCCCCCCCCccEEEEeccccc
Confidence 34777776654 9999999997 556766 99999877654 3453 4444332111 467999998863
No 118
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=91.17 E-value=0.081 Score=37.97 Aligned_cols=27 Identities=30% Similarity=0.739 Sum_probs=22.2
Q ss_pred CCCCCcEecC-----CC-ceecCCCCCCCCCCC
Q psy18122 57 QCKGMVLCTS-----NF-GCSCATGYQGEQCLE 83 (188)
Q Consensus 57 ~C~~~g~C~~-----~~-~C~C~~g~~G~~C~~ 83 (188)
+|.|+|+|.. .+ .|.|++||.|.+|+.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei 46 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI 46 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceec
Confidence 7899999965 22 699999999999974
No 119
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=90.93 E-value=0.047 Score=38.98 Aligned_cols=30 Identities=30% Similarity=0.912 Sum_probs=25.0
Q ss_pred CCCCCCCCcEecC---CCceecCCCCCCCCCCC
Q psy18122 54 SPNQCKGMVLCTS---NFGCSCATGYQGEQCLE 83 (188)
Q Consensus 54 ~~~~C~~~g~C~~---~~~C~C~~g~~G~~C~~ 83 (188)
...||.+++.|.+ .+.|.|.+||+|..|+.
T Consensus 123 ~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 123 TNTSCSGHGECVETINNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp CTTGGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCCCEeecCCCCeeEECCCCccCccccc
Confidence 3568888999976 57799999999999974
No 120
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=88.68 E-value=0.17 Score=29.51 Aligned_cols=27 Identities=37% Similarity=0.781 Sum_probs=20.1
Q ss_pred CCCCCCcEec--C---CCceecCCCCCCCCCCC
Q psy18122 56 NQCKGMVLCT--S---NFGCSCATGYQGEQCLE 83 (188)
Q Consensus 56 ~~C~~~g~C~--~---~~~C~C~~g~~G~~C~~ 83 (188)
+-|.+ |+|. . ...|.|+++|+|.+|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 35666 4886 2 25599999999999973
No 121
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=88.51 E-value=0.24 Score=37.02 Aligned_cols=24 Identities=25% Similarity=0.863 Sum_probs=19.9
Q ss_pred cc--cceeccccccccccccCCccCCCCCC
Q psy18122 101 CI--DGCDQYTGVCRGGCTTPYLIRPYCKQ 128 (188)
Q Consensus 101 C~--~~C~~~~g~C~~~C~~g~~~G~~C~~ 128 (188)
|. |.|.. .++|. |++|| +|.+|+.
T Consensus 155 C~ngG~Cv~-P~~C~--C~~Gw-~G~~C~~ 180 (188)
T 2ygo_A 155 CRNGGFCNE-RRICE--CPDGF-HGPHCEG 180 (188)
T ss_dssp CCTTCEECT-TSCEE--CCTTC-BTTTTCB
T ss_pred CCCCCEeCC-CCccc--CcCCC-CCCCCcC
Confidence 55 67764 57899 99999 9999987
No 122
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=88.41 E-value=0.24 Score=47.23 Aligned_cols=32 Identities=34% Similarity=0.696 Sum_probs=27.6
Q ss_pred CCCCCCCCCCCCeEec----ceEeCC-CCCcCCCCCC
Q psy18122 5 TNENSIECLNGGVEMD----SMCLCT-PGFAGKKCEI 36 (188)
Q Consensus 5 ~~~~~~~C~~~g~C~~----~~C~C~-~G~~G~~C~~ 36 (188)
+.+.++||.|+|.|.+ +.|.|+ +||.|..|+.
T Consensus 620 ~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~~ 656 (1245)
T 3qcw_A 620 KPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER 656 (1245)
T ss_dssp CGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSCE
T ss_pred CCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCcc
Confidence 3456789999999987 899999 7999999975
No 123
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=87.80 E-value=0.21 Score=41.52 Aligned_cols=32 Identities=22% Similarity=0.770 Sum_probs=26.3
Q ss_pred cCCCCCCCCCcEecC---CCceecCC-CCCCCCCCC
Q psy18122 52 SKSPNQCKGMVLCTS---NFGCSCAT-GYQGEQCLE 83 (188)
Q Consensus 52 ~c~~~~C~~~g~C~~---~~~C~C~~-g~~G~~C~~ 83 (188)
.|...||.++|.|.+ .+.|.|+. +|.|..|+.
T Consensus 187 ~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 187 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp CCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred CcccccCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence 355789999999986 57799985 999998874
No 124
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=87.79 E-value=0.52 Score=27.04 Aligned_cols=21 Identities=24% Similarity=0.700 Sum_probs=17.0
Q ss_pred CCCCCCCeEec----ceEeCCCCCcCC
Q psy18122 10 IECLNGGVEMD----SMCLCTPGFAGK 32 (188)
Q Consensus 10 ~~C~~~g~C~~----~~C~C~~G~~G~ 32 (188)
.+|. +.|.+ +.|.|++||.+.
T Consensus 20 ~~C~--~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 20 PQCQ--HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp CTTS--SEEEEETTEEEEECSTTCEEC
T ss_pred CCCC--CEeECCCCCeEEECCCCCeEC
Confidence 6786 38987 889999999864
No 125
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=84.80 E-value=0.15 Score=42.42 Aligned_cols=26 Identities=19% Similarity=0.575 Sum_probs=23.3
Q ss_pred CCCCCCCCCeEecceEeCCCCCcCCC
Q psy18122 8 NSIECLNGGVEMDSMCLCTPGFAGKK 33 (188)
Q Consensus 8 ~~~~C~~~g~C~~~~C~C~~G~~G~~ 33 (188)
.++.|++||.|..+.|+|.+||.|.+
T Consensus 194 Cp~~CsGhG~C~~g~C~Cd~G~~g~d 219 (387)
T 2ddu_A 194 CPSYCSGHGDCISGVCFCDLGYTAAQ 219 (387)
T ss_dssp CGGGGGGSEEEETTEEEECTTEEEET
T ss_pred CccccCCCceecCCeEEecCCcccCC
Confidence 55679999999999999999999975
No 126
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=75.79 E-value=3.4 Score=27.44 Aligned_cols=70 Identities=17% Similarity=0.381 Sum_probs=39.5
Q ss_pred CCCCCCCCCCCCCCCCeEec-----ceEeCCCCCcCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC--C------
Q psy18122 1 MTSNTNENSIECLNGGVEMD-----SMCLCTPGFAGKKCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS--N------ 67 (188)
Q Consensus 1 ~~~~~~~~~~~C~~~g~C~~-----~~C~C~~G~~G~~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~--~------ 67 (188)
|.++.-+....|..++.|.. ..|+|.+||.|.. ..|.+.- + ..|.-.++.|..++.|.. .
T Consensus 1 ~~~~h~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg--~~Cv~~~-~----~sC~~nNGGCd~nA~C~~~~~~~~~~k 73 (99)
T 1ob1_C 1 NISQHQCVKKQCPQNSGCFRHLDEREECKCLLNYKQEG--DKCVENP-N----PTCNENNGGCDADAKCTEEDSGSNGKK 73 (99)
T ss_dssp CCCTTCCCSCCCCTTEEEECCTTSCCEEEECTTEEEET--TEEEECS-C----CCSTTGGGGCCTTEEEECCSCSSSSCC
T ss_pred CCcceEeccCCCCCCCCeEEcCCCCEEEEecCCeecCC--CeEeeCC-C----CChhhcCCCcCCCceeEecCCcccCCc
Confidence 34444444467778888876 6899999998752 1121100 0 122222345666677754 1
Q ss_pred CceecCCCCC
Q psy18122 68 FGCSCATGYQ 77 (188)
Q Consensus 68 ~~C~C~~g~~ 77 (188)
..|.|.+++.
T Consensus 74 i~C~C~~g~~ 83 (99)
T 1ob1_C 74 ITCECTKPDS 83 (99)
T ss_dssp CEEEECSTTC
T ss_pred eEeEeCCCCc
Confidence 3388887753
No 127
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=71.56 E-value=2.2 Score=26.35 Aligned_cols=23 Identities=13% Similarity=0.283 Sum_probs=17.4
Q ss_pred CCCCCCCCeEec----ceEe-CCCCCcC
Q psy18122 9 SIECLNGGVEMD----SMCL-CTPGFAG 31 (188)
Q Consensus 9 ~~~C~~~g~C~~----~~C~-C~~G~~G 31 (188)
..+|.+++.|++ |.|. +..||.+
T Consensus 10 ~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 10 PEACKGEMKCINHYGGYLCLPRSAAVIN 37 (71)
T ss_dssp CCSCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred CCCCCCCCEeECCCCCeEecccCCcccc
Confidence 467988889987 8897 4567764
No 128
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=68.69 E-value=1.5 Score=34.88 Aligned_cols=28 Identities=21% Similarity=0.558 Sum_probs=22.6
Q ss_pred CCCCCCCCeEec----ceEeCCCCCc--CCCCCC
Q psy18122 9 SIECLNGGVEMD----SMCLCTPGFA--GKKCEI 36 (188)
Q Consensus 9 ~~~C~~~g~C~~----~~C~C~~G~~--G~~C~~ 36 (188)
..+|..++.|.+ +.|.|++||. |..|..
T Consensus 12 ~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d 45 (285)
T 1gl4_A 12 RHQCSVHAECRDYATGFCCRCVANYTGNGRQCVA 45 (285)
T ss_dssp GGGSCTTEEEEECSSCEEEEECTTEEECSSSEEE
T ss_pred CCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCC
Confidence 467998999997 8999999998 555543
No 129
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=65.73 E-value=1 Score=37.33 Aligned_cols=24 Identities=38% Similarity=0.689 Sum_probs=21.0
Q ss_pred CCCCCCcEecCCCceecCCCCCCCC
Q psy18122 56 NQCKGMVLCTSNFGCSCATGYQGEQ 80 (188)
Q Consensus 56 ~~C~~~g~C~~~~~C~C~~g~~G~~ 80 (188)
+.|.++|.|.. +.|.|.+||.|..
T Consensus 196 ~~CsGhG~C~~-g~C~Cd~G~~g~d 219 (387)
T 2ddu_A 196 SYCSGHGDCIS-GVCFCDLGYTAAQ 219 (387)
T ss_dssp GGGGGSEEEET-TEEEECTTEEEET
T ss_pred cccCCCceecC-CeEEecCCcccCC
Confidence 46789999987 9999999999974
No 130
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=62.94 E-value=8.4 Score=25.80 Aligned_cols=64 Identities=19% Similarity=0.363 Sum_probs=36.8
Q ss_pred CCCCCCCCCCCCCCeEec-----ceEeCCCCCcCC--CCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecCC----Ccee
Q psy18122 3 SNTNENSIECLNGGVEMD-----SMCLCTPGFAGK--KCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTSN----FGCS 71 (188)
Q Consensus 3 ~~~~~~~~~C~~~g~C~~-----~~C~C~~G~~G~--~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~~----~~C~ 71 (188)
++.-+....|..++.|.. -.|+|.+||+|. .|... . ..|.-..+.|..+..|... -.|.
T Consensus 9 ~~h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~-N---------p~C~~nNGGCd~nAeC~~~~~~ki~C~ 78 (105)
T 1n1i_A 9 SAHKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA-S---------ITCEENNGGCAPEAECTMDDKKEVECK 78 (105)
T ss_dssp CTTSCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC-C---------CCTTSGGGGSCTTSEEEECTTSCEEEE
T ss_pred cCcEecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC-C---------cchhhcCCCcCCCcEeEECCCCEEEeE
Confidence 333333346777778865 679999999875 23221 0 1122224456677777642 2388
Q ss_pred cCCCC
Q psy18122 72 CATGY 76 (188)
Q Consensus 72 C~~g~ 76 (188)
|..+|
T Consensus 79 C~~~~ 83 (105)
T 1n1i_A 79 CTKEG 83 (105)
T ss_dssp CCSTT
T ss_pred CCCCC
Confidence 87775
No 131
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=62.25 E-value=2.5 Score=36.47 Aligned_cols=28 Identities=25% Similarity=0.630 Sum_probs=25.1
Q ss_pred CCCCCCCeEec-ceEeCCCCCcCCCCCCC
Q psy18122 10 IECLNGGVEMD-SMCLCTPGFAGKKCEIP 37 (188)
Q Consensus 10 ~~C~~~g~C~~-~~C~C~~G~~G~~C~~~ 37 (188)
..|+++|.|.+ ..|.|.+||.+++|+..
T Consensus 454 ~~C~~~GVCNn~~~CHC~~GwaPP~C~~~ 482 (510)
T 3g5c_A 454 TICSGNGVCSNELKCVCNRHWIGSDCNTY 482 (510)
T ss_dssp CSGGGTEEEBTTSCEEECTTEESTTSCEE
T ss_pred cccCCCCeeCCCCCcCCCCCCCCCCCCCC
Confidence 35999999998 88999999999999874
No 132
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=61.85 E-value=3.2 Score=38.29 Aligned_cols=30 Identities=30% Similarity=0.712 Sum_probs=25.0
Q ss_pred CCCCCCCCCeEec----ceEeCCCCCcCCCCCCC
Q psy18122 8 NSIECLNGGVEMD----SMCLCTPGFAGKKCEIP 37 (188)
Q Consensus 8 ~~~~C~~~g~C~~----~~C~C~~G~~G~~C~~~ 37 (188)
.-+||.|+|.+.. ..|.|++||.|..|+..
T Consensus 501 ~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~ 534 (913)
T 3t5o_A 501 QCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQ 534 (913)
T ss_dssp GSCCBTTTBEEEEETTEEEEECCTTBCSTTSCCB
T ss_pred cCCCCCCCCEeecCCCceEEEccCCccccCccCc
Confidence 4458999999984 56889999999999763
No 133
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=60.62 E-value=1.1 Score=35.64 Aligned_cols=28 Identities=36% Similarity=0.942 Sum_probs=21.6
Q ss_pred CCCCCCCcEecC---CCceecCCCCC--CCCCC
Q psy18122 55 PNQCKGMVLCTS---NFGCSCATGYQ--GEQCL 82 (188)
Q Consensus 55 ~~~C~~~g~C~~---~~~C~C~~g~~--G~~C~ 82 (188)
..+|..++.|.+ ++.|.|++||. |..|.
T Consensus 12 ~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~ 44 (285)
T 1gl4_A 12 RHQCSVHAECRDYATGFCCRCVANYTGNGRQCV 44 (285)
T ss_dssp GGGSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred CCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC
Confidence 346888889986 67899999998 55554
No 134
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=58.26 E-value=4.7 Score=34.33 Aligned_cols=26 Identities=31% Similarity=0.721 Sum_probs=15.6
Q ss_pred CCCC-CCcEecCCCceecCCCCCCCCCC
Q psy18122 56 NQCK-GMVLCTSNFGCSCATGYQGEQCL 82 (188)
Q Consensus 56 ~~C~-~~g~C~~~~~C~C~~g~~G~~C~ 82 (188)
..|. ++|+-.- |.|.|.+||.|..|+
T Consensus 446 ~~C~~g~G~~~C-G~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 446 HRCNNGNGTFEC-GVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTTTTTTEEEET-TEEEECTTC------
T ss_pred cccCCCCeeEeC-CceECcCCCCCCCCC
Confidence 3576 6777666 889999999999885
No 135
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=51.80 E-value=3 Score=24.16 Aligned_cols=15 Identities=47% Similarity=1.174 Sum_probs=11.5
Q ss_pred EecC---CCceecCCCCC
Q psy18122 63 LCTS---NFGCSCATGYQ 77 (188)
Q Consensus 63 ~C~~---~~~C~C~~g~~ 77 (188)
.|.+ ++.|.|++||.
T Consensus 14 ~C~nt~Gsy~C~C~~Gy~ 31 (55)
T 2jkh_L 14 FCHEEQNSVVCSCARGYT 31 (55)
T ss_dssp EEEEETTEEEEECCTTEE
T ss_pred EeEcCCCCeEEeCCCCCE
Confidence 5655 47799999996
No 136
>1mox_A Epidermal growth factor receptor; EGFR, receptor, complex, transferase-growth F complex; HET: NAG FUC BMA MAN; 2.50A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1
Probab=48.32 E-value=16 Score=31.32 Aligned_cols=53 Identities=26% Similarity=0.574 Sum_probs=27.3
Q ss_pred CCCCCCCCCCCCCCCCCCccCCCCCCCCCcEecC--CCce-ecCCCCCCCCCCCCCCCCcc
Q psy18122 33 KCEIPCDRNNFGHKCSMLCSKSPNQCKGMVLCTS--NFGC-SCATGYQGEQCLEHCPEDYY 90 (188)
Q Consensus 33 ~C~~~C~~g~~G~~C~~~C~c~~~~C~~~g~C~~--~~~C-~C~~g~~G~~C~~~C~~g~~ 90 (188)
.|...|+.++|+.. ...| |. ..|. +.|.. ...| .|.....+..|...|++|++
T Consensus 190 ~C~~~C~~~~~~~~-~~~C-Ch-~~C~--~~C~gp~~~~C~~C~~~~~~~~Cv~~Cp~g~y 245 (501)
T 1mox_A 190 ICAQQCSGRCRGKS-PSDC-CH-NQCA--AGCTGPRESDCLVCRKFRDEATCKDTCPPLML 245 (501)
T ss_dssp SCCTTCSSCBSSSS-TTSB-CC-TTEE--EEESSSSSTTEEEESSEEETTEEESSCCCSEE
T ss_pred cccCcCCcccccCC-CCCe-EC-CccC--CccCCCCCcccccccccCCCCcccccCCCCee
Confidence 45555766666521 1222 22 1232 23432 2346 56665666677778888874
No 137
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=47.75 E-value=7.6 Score=33.41 Aligned_cols=27 Identities=26% Similarity=0.823 Sum_probs=23.5
Q ss_pred CCCCCcEecCCCceecCCCCCCCCCCC
Q psy18122 57 QCKGMVLCTSNFGCSCATGYQGEQCLE 83 (188)
Q Consensus 57 ~C~~~g~C~~~~~C~C~~g~~G~~C~~ 83 (188)
.|.++|+|.+...|.|.+||..++|+.
T Consensus 455 ~C~~~GVCNn~~~CHC~~GwaPP~C~~ 481 (510)
T 3g5c_A 455 ICSGNGVCSNELKCVCNRHWIGSDCNT 481 (510)
T ss_dssp SGGGTEEEBTTSCEEECTTEESTTSCE
T ss_pred ccCCCCeeCCCCCcCCCCCCCCCCCCC
Confidence 588999998778899999999999974
No 138
>1bx7_A Hirustasin; anti-coagulant, peptidic inhibitors, conformational flexibility, serine protease inhibitor; 1.20A {Hirudo medicinalis} SCOP: g.3.15.1 PDB: 1bx8_A 1hia_I
Probab=46.86 E-value=41 Score=19.50 Aligned_cols=34 Identities=21% Similarity=0.489 Sum_probs=25.2
Q ss_pred CCCCCCCCCCCeEecceEeCCCCCcCCCCCCCCCCCCC
Q psy18122 6 NENSIECLNGGVEMDSMCLCTPGFAGKKCEIPCDRNNF 43 (188)
Q Consensus 6 ~~~~~~C~~~g~C~~~~C~C~~G~~G~~C~~~C~~g~~ 43 (188)
.+....|+..-.|..+.|.|.. ..|...|+.||.
T Consensus 5 ~cg~~tcs~aq~c~~~kcvC~~----~~Cri~Cp~GFk 38 (55)
T 1bx7_A 5 TCGGETCSAAQVCLKGKCVCNE----VHCRIRCKYGLK 38 (55)
T ss_dssp CBTTBCCCTTEEEETTEEEECC----CCCCCCCTTCBC
T ss_pred ccCccccChhhEEecCcEEeeh----hheEEeCCCcce
Confidence 3445567778888889999876 358777888775
No 139
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=45.38 E-value=9.5 Score=31.02 Aligned_cols=37 Identities=19% Similarity=0.366 Sum_probs=27.0
Q ss_pred CCCCC-CeEec----ceEeCCCCCcCCCCCCCCCCCCCCCCCC
Q psy18122 11 ECLNG-GVEMD----SMCLCTPGFAGKKCEIPCDRNNFGHKCS 48 (188)
Q Consensus 11 ~C~~~-g~C~~----~~C~C~~G~~G~~C~~~C~~g~~G~~C~ 48 (188)
.|++| ..|.. +.|.|.....|..|+. |.++|++..-.
T Consensus 271 ~CnGHA~~C~~~~g~~~C~C~HnT~G~~Ce~-C~p~y~~~pw~ 312 (338)
T 3tbd_A 271 KCNLHANLCSMREGSLQCECEHNTTGPDCGK-CKKNFRTRSWR 312 (338)
T ss_dssp CCTTBCSCEEEETTEEEECCCTTEESTTSCE-ECTTCBSSCCC
T ss_pred cccCCcCccCCCCCCceecCCCCCCCCCCcc-cCccccCCCCC
Confidence 35543 35654 4699999999999987 99988877654
No 140
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=42.94 E-value=39 Score=30.75 Aligned_cols=53 Identities=34% Similarity=0.909 Sum_probs=33.1
Q ss_pred e-ecCCCCCCCCCCCCCCCCcc---CCCccCC--Ccc----cc----cceec---cccccccccccCCccC
Q psy18122 70 C-SCATGYQGEQCLEHCPEDYY---GADCKQK--CGE----CI----DGCDQ---YTGVCRGGCTTPYLIR 123 (188)
Q Consensus 70 C-~C~~g~~G~~C~~~C~~g~~---G~~C~~~--C~~----C~----~~C~~---~~g~C~~~C~~g~~~G 123 (188)
| .|..-+.+..|...|+++++ +..|... |.. |. ..|.+ ..+.|+..|+.|| ..
T Consensus 225 C~~C~~~~~~~~Cv~~Cp~~~y~~~~~~C~~~~~C~~~~~~c~~~~~~~c~~~~~~~~~Cv~~CP~g~-~~ 294 (897)
T 2dtg_E 225 CVACRNFYLDGRCVETCPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGY-TM 294 (897)
T ss_dssp EECCSSCBBTTBCCSSCCSSCCCCTTSBCCCHHHHHHHSSCCCSTTTTSCCCCEEETTEEESSCCSSC-EE
T ss_pred eeECccCccCCcchhhcCCceeEecCcEEcChhHhhccCccccCCCcccccceeeECCEEccCCCCCc-cc
Confidence 7 67777778889889999877 3344331 221 11 12322 3467887799997 54
No 141
>1rju_V Metallothionein; Cu(I)-thiolate, metal binding protein; 1.44A {Synthetic} SCOP: g.46.1.1 PDB: 1aoo_A 1aqq_A 1aqr_A 1fmy_A
Probab=39.38 E-value=17 Score=18.50 Aligned_cols=18 Identities=44% Similarity=1.047 Sum_probs=10.0
Q ss_pred CCCCCCcEecCCCceecCCC
Q psy18122 56 NQCKGMVLCTSNFGCSCATG 75 (188)
Q Consensus 56 ~~C~~~g~C~~~~~C~C~~g 75 (188)
+.|.++-.|.. .|.|+.|
T Consensus 8 gscknneqcqk--scscptg 25 (36)
T 1rju_V 8 GSCKNNEQCQK--SCSCPTG 25 (36)
T ss_dssp TTTTTCGGGTT--SCCSCTT
T ss_pred CCccChHHHhh--cCCCCCC
Confidence 45666665543 4566544
No 142
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=37.55 E-value=7 Score=33.56 Aligned_cols=25 Identities=36% Similarity=0.644 Sum_probs=0.0
Q ss_pred CCC-CCcEecCCCceecCCCCCCCCCC
Q psy18122 57 QCK-GMVLCTSNFGCSCATGYQGEQCL 82 (188)
Q Consensus 57 ~C~-~~g~C~~~~~C~C~~g~~G~~C~ 82 (188)
.|. ++|+-.- |.|.|.+||.|..|+
T Consensus 468 ~C~~g~G~~~C-G~C~C~~G~~G~~Ce 493 (503)
T 3v4v_B 468 HCSDGQGHLQC-GVCSCAPGRLGRLCE 493 (503)
T ss_dssp ---------------------------
T ss_pred ccCCCCeeEeC-CceECcCCCcCCCCC
Confidence 454 4444443 678999999999996
No 143
>1jlz_A Tityustoxin alpha-KTX; scorpion venom, K+-channel blocker, structure; NMR {Synthetic} SCOP: g.3.7.2
Probab=37.49 E-value=14 Score=18.24 Aligned_cols=17 Identities=24% Similarity=0.722 Sum_probs=13.3
Q ss_pred CCCCCCeEecceEeCCC
Q psy18122 11 ECLNGGVEMDSMCLCTP 27 (188)
Q Consensus 11 ~C~~~g~C~~~~C~C~~ 27 (188)
||..+|.|.++.|.|.+
T Consensus 8 ~C~~~gKCmNgkC~Cy~ 24 (26)
T 1jlz_A 8 KCKGSGKCINGRCKCYX 24 (26)
T ss_dssp HTTSSEEEETTEEEEC-
T ss_pred hhCCCCEEeCCCceeec
Confidence 56678899999999865
No 144
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=34.84 E-value=14 Score=21.12 Aligned_cols=15 Identities=33% Similarity=1.057 Sum_probs=11.0
Q ss_pred ceEeCCCCCc----CCCCC
Q psy18122 21 SMCLCTPGFA----GKKCE 35 (188)
Q Consensus 21 ~~C~C~~G~~----G~~C~ 35 (188)
+.|.|++||. |..|.
T Consensus 21 ~~C~C~~Gy~L~~Dg~tC~ 39 (53)
T 2bz6_L 21 RSCRCHEGYSLLADGVSCT 39 (53)
T ss_dssp EEEECCTTEEECTTSSCEE
T ss_pred EEeeCCCCCEECCCCCccc
Confidence 5699999996 55554
No 145
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=34.63 E-value=8.3 Score=21.88 Aligned_cols=11 Identities=55% Similarity=1.217 Sum_probs=8.6
Q ss_pred CCceecCCCCC
Q psy18122 67 NFGCSCATGYQ 77 (188)
Q Consensus 67 ~~~C~C~~g~~ 77 (188)
++.|.|++||.
T Consensus 18 s~~C~C~~Gy~ 28 (51)
T 1kig_L 18 EVRCSCAHGYV 28 (51)
T ss_dssp EECCCCCTTEE
T ss_pred CeEEeCCCCcE
Confidence 46788888885
No 146
>3bg4_D Guamerin; chymotrypsin, elastase, inhibitor, digestion, hydrolase, protease, secreted, serine protease, zymogen, protease inhibitor; 2.50A {Hirudo nipponia}
Probab=32.24 E-value=26 Score=20.35 Aligned_cols=38 Identities=24% Similarity=0.829 Sum_probs=23.0
Q ss_pred CCCCCCcEecCCCceecCCCCCCCCCCCCCCCCccC--CCccCCC
Q psy18122 56 NQCKGMVLCTSNFGCSCATGYQGEQCLEHCPEDYYG--ADCKQKC 98 (188)
Q Consensus 56 ~~C~~~g~C~~~~~C~C~~g~~G~~C~~~C~~g~~G--~~C~~~C 98 (188)
..|.....|.. ..|.|. -..|...|+.||.- ..|+.+|
T Consensus 15 ~TCseaqvCl~-~kcvC~----d~~Cr~~CpnGfK~DenGCe~~C 54 (57)
T 3bg4_D 15 KTCSPAQVCLN-NECACT----AIRCMIFCPNGFKVDENGCEYPC 54 (57)
T ss_dssp SCCCTTEEECS-SSEEEC----SEEESCCCTTCEEECTTSCEEEE
T ss_pred eeccHHHeeec-Cceeec----cceeeeeCCCCccCcCCCCcccc
Confidence 34566667765 677775 34566678888752 3455444
No 147
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=30.57 E-value=20 Score=31.07 Aligned_cols=24 Identities=29% Similarity=0.632 Sum_probs=20.5
Q ss_pred CCCCCCCCeEec-----ceEeCCCCCcCC
Q psy18122 9 SIECLNGGVEMD-----SMCLCTPGFAGK 32 (188)
Q Consensus 9 ~~~C~~~g~C~~-----~~C~C~~G~~G~ 32 (188)
.+||..+..|+. +.|.|+.||.|.
T Consensus 26 ~~~c~~~a~C~~~~~~~~~c~C~~G~ag~ 54 (551)
T 3fby_A 26 PSECHEHADCVLERDGSRSCVCAVGWAGN 54 (551)
T ss_dssp BCCCCTTEEEEECTTSCEEEEECTTEESS
T ss_pred CCCCCCCCeeEeCCCCCEecCCCCCCCCC
Confidence 369999999986 789999999875
No 148
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=30.00 E-value=23 Score=32.63 Aligned_cols=32 Identities=28% Similarity=0.529 Sum_probs=23.7
Q ss_pred CccCCCCCCCCCcEecC-C--CceecCCCCCCCCCCC
Q psy18122 50 LCSKSPNQCKGMVLCTS-N--FGCSCATGYQGEQCLE 83 (188)
Q Consensus 50 ~C~c~~~~C~~~g~C~~-~--~~C~C~~g~~G~~C~~ 83 (188)
.|.|. ||.+++.+.. . -.|.|+++|.|..|+.
T Consensus 499 ~c~C~--PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~ 533 (913)
T 3t5o_A 499 PCQCA--PCPNNGRPTLSGTECLCVCQSGTYGENCEK 533 (913)
T ss_dssp GGGSC--CBTTTBEEEEETTEEEEECCTTBCSTTSCC
T ss_pred cccCC--CCCCCCEeecCCCceEEEccCCccccCccC
Confidence 34443 7999999874 2 3378999999999875
No 149
>1eja_B Bdellastasin; complex (hydrolase/inhibitor), hydrolase, inhibitor, antistasin, trypsin; 2.70A {Hirudo medicinalis} SCOP: g.3.15.1 PDB: 1c9t_G 1c9p_B
Probab=29.42 E-value=40 Score=19.79 Aligned_cols=38 Identities=24% Similarity=0.737 Sum_probs=21.7
Q ss_pred CCCCCcEecCCCceecCCCCCCCCCCCCCCCCccC--CCccCCCc
Q psy18122 57 QCKGMVLCTSNFGCSCATGYQGEQCLEHCPEDYYG--ADCKQKCG 99 (188)
Q Consensus 57 ~C~~~g~C~~~~~C~C~~g~~G~~C~~~C~~g~~G--~~C~~~C~ 99 (188)
.|+....|.. ..|.|.. .+|...|+.||.- ..|+..|.
T Consensus 14 tCs~aq~c~~-~kcvC~~----~~Cri~CP~Gfk~DENGCe~~C~ 53 (59)
T 1eja_B 14 TCSGAQMCEV-DKCVCSD----LHCKVKCEHGFKKDDNGCEYACI 53 (59)
T ss_dssp EECTTCEEET-TEEECCC----EEESCCCTTCBCCCSSCSCCTTC
T ss_pred ccccceeeec-Cceeccc----cceeEeCCCcccccCCCCcceee
Confidence 4455556655 6777753 2466677777753 34554444
No 150
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=26.78 E-value=21 Score=25.32 Aligned_cols=18 Identities=44% Similarity=1.152 Sum_probs=12.9
Q ss_pred CCCCcEecC---CCceecCCCCC
Q psy18122 58 CKGMVLCTS---NFGCSCATGYQ 77 (188)
Q Consensus 58 C~~~g~C~~---~~~C~C~~g~~ 77 (188)
|.+ .|.+ .+.|.|++||+
T Consensus 137 C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 137 CDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp SSS--EEEEETTEEEEECCTTEE
T ss_pred cCC--ccccCCCCEEEeCCCCcE
Confidence 544 5765 46699999997
No 151
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=24.71 E-value=35 Score=27.64 Aligned_cols=38 Identities=21% Similarity=0.380 Sum_probs=25.9
Q ss_pred cceecccc--ccccccccCCccCCCCCCCCCCCCCCCeeecCcc
Q psy18122 103 DGCDQYTG--VCRGGCTTPYLIRPYCKQPHSYLEESPRVLDSSY 144 (188)
Q Consensus 103 ~~C~~~~g--~C~~~C~~g~~~G~~C~~~c~~~~~~~~~~~~~~ 144 (188)
..|....+ +|. |..+. .|.+|++ |.+++.+.+-..+.+
T Consensus 277 ~~C~~~~g~~~C~--C~HnT-~G~~Ce~-C~p~y~~~pw~pg~~ 316 (338)
T 3tbd_A 277 NLCSMREGSLQCE--CEHNT-TGPDCGK-CKKNFRTRSWRAGSY 316 (338)
T ss_dssp SCEEEETTEEEEC--CCTTE-ESTTSCE-ECTTCBSSCCCCCBC
T ss_pred CccCCCCCCceec--CCCCC-CCCCCcc-cCccccCCCCCCCCc
Confidence 67776555 587 99998 9999998 666565544443333
No 152
>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}
Probab=20.86 E-value=46 Score=23.15 Aligned_cols=10 Identities=20% Similarity=0.437 Sum_probs=6.2
Q ss_pred CceecCCCCC
Q psy18122 68 FGCSCATGYQ 77 (188)
Q Consensus 68 ~~C~C~~g~~ 77 (188)
..|.|++||.
T Consensus 79 tvC~C~~G~y 88 (142)
T 2uwi_A 79 RICHCDSNSY 88 (142)
T ss_dssp CEEEECTTEE
T ss_pred CEeeCCCCcE
Confidence 4566766664
No 153
>1pvz_A K+ toxin-like peptide; alpha/beta scaffold; NMR {Mesobuthus martensii} SCOP: g.3.7.2
Probab=20.34 E-value=34 Score=17.47 Aligned_cols=15 Identities=20% Similarity=0.647 Sum_probs=11.9
Q ss_pred CCCCCCeEecceEeC
Q psy18122 11 ECLNGGVEMDSMCLC 25 (188)
Q Consensus 11 ~C~~~g~C~~~~C~C 25 (188)
||..+|.|.++.|.|
T Consensus 16 ~C~~~gKC~NgkC~C 30 (31)
T 1pvz_A 16 KCPGNPPCRNGFCAC 30 (31)
T ss_dssp HSSSCCCEETTEESC
T ss_pred hhccCCcccCCCcee
Confidence 566778898888876
Done!