RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy18129
(470 letters)
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein;
2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A
1ycn_A 2q4c_A 1dk5_A
Length = 321
Score = 296 bits (758), Expect = 8e-98
Identities = 84/386 (21%), Positives = 138/386 (35%), Gaps = 73/386 (18%)
Query: 84 GNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGIRTITQVYETAYK 143
+ V P ++L KA SG GT+E +++IL + I + Y Y
Sbjct: 4 HHHATLTVPTTVPSVSEDCEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYAETYG 63
Query: 144 ASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQALLDAGVKKWGTDESTF 203
L K + + S F+RL++ +
Sbjct: 64 EDLLKALDKELSNDFERLVLLWA------------------------------------- 86
Query: 204 NSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKT 263
P DA A K + + +++I RS Q + A+
Sbjct: 87 -----LDPAER---------DALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYHA 132
Query: 264 LYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQ 323
Y K +E+ + +G L + R E EV+
Sbjct: 133 RYKK--------------SLEEDVAHHTTGDFHKLLLPL-------VSSYRYEGEEVNMT 171
Query: 324 LARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMS 383
LA+ +A+ L + K +D+ +L TRS Q+ T Y+ G+DI +K +
Sbjct: 172 LAKTEAKLLHEKISNKAYSDDDVIR-VLATRSKAQINATLNHYKNEYGNDINKDLKADPK 230
Query: 384 GGVKDGFLSIVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLK 443
S V+C+ Y + L+ A+ GTD+ L R++ TR+E+DL I + +
Sbjct: 231 DEFLALLRSTVKCLVYPEKYFEKVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADEYQR 290
Query: 444 LYGKTLEEYIKDDCSGDYKRLLLALV 469
L I D GDY++LLL L
Sbjct: 291 RNSVPLTRAIVKDTHGDYEKLLLVLA 316
Score = 216 bits (552), Expect = 6e-67
Identities = 69/328 (21%), Positives = 115/328 (35%), Gaps = 70/328 (21%)
Query: 72 MDLIRELKSELSGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGI 131
DL++ L ELS +FE V+ + A ++A + + L+EI T S +
Sbjct: 64 EDLLKALDKELSNDFERLVLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQL 123
Query: 132 RTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQALLDA 191
Q Y YK SLE+D+ T+G F +LL+ L + R E EV+ LA+ +A+ L +
Sbjct: 124 LHARQAYHARYKKSLEEDVAHHTTGDFHKLLLPLVSSYRYEGEEVNMTLAKTEAKLLHEK 183
Query: 192 GVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSI 251
K +D+ +I +LA RS
Sbjct: 184 ISNKAYSDDD----------------------------------------VIRVLATRSK 203
Query: 252 VQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKEL 311
Q + T Y+ G+DI +K + S
Sbjct: 204 AQ--------------INATLNHYKNEYGNDINKDLKADPKDEFLALLRSTVKCLV---- 245
Query: 312 KSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAG 371
P+ +L + + GTDE ++ TR+ L+ EY+
Sbjct: 246 ---------YPEKYFEK---VLRLAINRRGTDEGALTRVVCTRAEVDLKVIADEYQRRNS 293
Query: 372 HDIEDAIKGEMSGGVKDGFLSIVQCVKD 399
+ AI + G + L + V++
Sbjct: 294 VPLTRAIVKDTHGDYEKLLLVLAGHVEN 321
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein,
helix BUN heparin, hexasaccharide, metal binding
protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB:
2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Length = 308
Score = 287 bits (736), Expect = 1e-94
Identities = 114/372 (30%), Positives = 178/372 (47%), Gaps = 71/372 (19%)
Query: 98 PDLYAKELHKAISGLGTDEKALVEILTTLSNFGIRTITQVYETAYKASLEKDIKGDTSGH 157
+ A + AI G DE +V ILT SN + I Y+ K L +K SGH
Sbjct: 4 AERDALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALSGH 63
Query: 158 FKRLLVSLSQANRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILQCTPTVFPAP 217
+ +++ L TP +
Sbjct: 64 LETVILGLL------------------------------------------KTPAQY--- 78
Query: 218 NFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEE 277
DA L+A+MKGLGTDE ++I+I+ R+ + EI +K +Y
Sbjct: 79 ------DASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKT---------- 122
Query: 278 LAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQALLDAGV 337
D+E I + SG + +++ RA ++ +D +L DA+ L DAGV
Sbjct: 123 ----DLEKDIISDTSGDFRKLMVALAKGRRA------EDGSVIDYELIDQDARDLYDAGV 172
Query: 338 KKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIVQCV 397
K+ GTD + SI+ RS L++ F Y+ + +D+ ++I+ E+ G +++ FL++VQC+
Sbjct: 173 KRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNLVQCI 232
Query: 398 KDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDC 457
++K Y A RL D+M G GT DK LIRI+V+RSE+D+ I+ F + YGK+L YI+ D
Sbjct: 233 QNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDT 292
Query: 458 SGDYKRLLLALV 469
GDY++ LL L
Sbjct: 293 KGDYQKALLYLC 304
Score = 210 bits (537), Expect = 7e-65
Identities = 84/325 (25%), Positives = 144/325 (44%), Gaps = 70/325 (21%)
Query: 72 MDLIRELKSELSGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGI 131
+L LKS LSG+ E ++ L+ A EL ++ GLGTDE +L+EI+ + +N +
Sbjct: 50 KELASALKSALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQEL 109
Query: 132 RTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDE-SVEVDPQLARADAQALLD 190
+ I +VY+ YK LEKDI DTSG F++L+V+L++ R E +D +L DA+ L D
Sbjct: 110 QEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDARDLYD 169
Query: 191 AGVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRS 250
AGVK+ GTD + I I+ +RS
Sbjct: 170 AGVKRKGTDVPKW---------------------------------------ISIMTERS 190
Query: 251 IVQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKE 310
+ L++ F Y+ + +D+ ++I+ E+ G +++ FL++ + K
Sbjct: 191 VPH--------------LQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNLVQCIQNK- 235
Query: 311 LKSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELA 370
A L D+ +K GT + I+V+RS + + E++
Sbjct: 236 --------------PLYFADRLYDS-MKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKY 280
Query: 371 GHDIEDAIKGEMSGGVKDGFLSIVQ 395
G + I+ + G + L +
Sbjct: 281 GKSLYYYIQQDTKGDYQKALLYLCG 305
Score = 165 bits (419), Expect = 2e-47
Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 43/262 (16%)
Query: 218 NFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEE 277
NF+A+ DA + A+K G DE I++IL RS QR +I A++
Sbjct: 1 NFDAERDALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRT------------ 48
Query: 278 LAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQALLDAGV 337
++ A+K +SG ++ L + A+ DA L + +
Sbjct: 49 --KKELASALKSALSGHLETVILGLLKT------------------PAQYDASELKAS-M 87
Query: 338 KKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIVQCV 397
K GTDE + I+ +R+ Q+L+ + Y+E+ D+E I + SG + +++ +
Sbjct: 88 KGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGR 147
Query: 398 KDKSS---------YLARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGK 447
+ + AR L DA GTD I I+ RS L + +
Sbjct: 148 RAEDGSVIDYELIDQDARDLYDAGVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPY 207
Query: 448 TLEEYIKDDCSGDYKRLLLALV 469
+ E I+ + GD + L LV
Sbjct: 208 DMLESIRKEVKGDLENAFLNLV 229
Score = 82.6 bits (204), Expect = 1e-17
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 73 DLIRELKSELSGNFED---AVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNF 129
D++ ++ E+ G+ E+ +V + P +A L+ ++ G GT +K L+ I+ + S
Sbjct: 208 DMLESIRKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEV 267
Query: 130 GIRTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQAN 169
+ I ++ Y SL I+ DT G +++ L+ L +
Sbjct: 268 DMLKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYLCGGD 307
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent
hexamerization switch E76, low calcium form; 1.93A
{Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Length = 315
Score = 285 bits (731), Expect = 9e-94
Identities = 140/380 (36%), Positives = 191/380 (50%), Gaps = 72/380 (18%)
Query: 90 VVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGIRTITQVYETAYKASLEKD 149
V + A+ L KA+ G+GTDEK++ IL T SN + I Y T + LE +
Sbjct: 6 VKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDE 65
Query: 150 IKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILQC 209
+K + SG+++ ++L
Sbjct: 66 LKSELSGNYEAAALALL------------------------------------------R 83
Query: 210 TPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLR 269
P F AE L AAMKGLGTD+ A+IDIL +S Q I AFK LY +
Sbjct: 84 KPDEF---------LAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKE-- 132
Query: 270 RTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADA 329
D+E I E SG + +S+ R E V+ A DA
Sbjct: 133 ------------DLEKEIISETSGNFQRLLVSM-------LQGGRKEDEPVNAAHAAEDA 173
Query: 330 QALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDG 389
A+ AG + GTDES FN++L TRSY QL + F EY +++ I AI+ E SG +K+G
Sbjct: 174 AAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNG 233
Query: 390 FLSIVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTL 449
L+IV+ V+++ +Y A RL AM G+GT DKTLIRI+V+RSEIDL +IK+ F +YGK+L
Sbjct: 234 LLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSL 293
Query: 450 EEYIKDDCSGDYKRLLLALV 469
E+I DDCSGDYK LLL +
Sbjct: 294 YEFIADDCSGDYKDLLLQIT 313
Score = 215 bits (550), Expect = 8e-67
Identities = 102/323 (31%), Positives = 143/323 (44%), Gaps = 69/323 (21%)
Query: 72 MDLIRELKSELSGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGI 131
L ELKSELSGN+E A +AL+ + A++LH A+ GLGTD+ AL++IL T SN I
Sbjct: 60 KHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQI 119
Query: 132 RTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQALLDA 191
I ++ YK LEK+I +TSG+F+RLLVS+ Q R E V+ A DA A+ A
Sbjct: 120 HAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQA 179
Query: 192 GVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSI 251
G + GTDES F +LA RS
Sbjct: 180 GEGQIGTDESRF---------------------------------------NAVLATRSY 200
Query: 252 VQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKEL 311
Q L + F EY +++ I AI+ E SG +K+G L+I
Sbjct: 201 PQ--------------LHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVE---- 242
Query: 312 KSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAG 371
+ A+ L +K GT + T ILV+RS L + ++ + G
Sbjct: 243 ---------NRFAYFAE---RLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYG 290
Query: 372 HDIEDAIKGEMSGGVKDGFLSIV 394
+ + I + SG KD L I
Sbjct: 291 KSLYEFIADDCSGDYKDLLLQIT 313
Score = 168 bits (428), Expect = 9e-49
Identities = 83/268 (30%), Positives = 125/268 (46%), Gaps = 42/268 (15%)
Query: 211 PTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRR 270
TV P +FN++ DAE LR AMKG+GTDEK+I ILA RS QR +I + TL+
Sbjct: 4 GTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLF----- 58
Query: 271 TFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQ 330
G +ED +K E+SG + L++ A+
Sbjct: 59 ---------GKHLEDELKSELSGNYEAAALALLRKPDE------------------FLAE 91
Query: 331 ALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGF 390
L A +K GTD++ IL T+S Q+ ++ L D+E I E SG +
Sbjct: 92 QLHAA-MKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLL 150
Query: 391 LSIVQCVKDKSSYL--------ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNF 441
+S++Q + + + A + A G IGTD+ ++ TRS L I +
Sbjct: 151 VSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEY 210
Query: 442 LKLYGKTLEEYIKDDCSGDYKRLLLALV 469
K+ KT+ + I+++ SGD K LLA+V
Sbjct: 211 SKISNKTILQAIENEFSGDIKNGLLAIV 238
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein
complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Length = 323
Score = 285 bits (730), Expect = 1e-93
Identities = 144/372 (38%), Positives = 196/372 (52%), Gaps = 72/372 (19%)
Query: 98 PDLYAKELHKAISGLGTDEKALVEILTTLSNFGIRTITQVYETAYKASLEKDIKGDTSGH 157
P + A+ + KAI G+GTDEK L+ ILT SN + I + Y+ AY L+ D+KGD SGH
Sbjct: 20 PSVDAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGH 79
Query: 158 FKRLLVSLSQANRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILQCTPTVFPAP 217
F+ L+V+ L P VF
Sbjct: 80 FEHLMVA------------------------------------------LVTPPAVF--- 94
Query: 218 NFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEE 277
DA+ L+ +MKG GT+E A+I+IL R+ Q +I+ A+ T+Y K
Sbjct: 95 ------DAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDISQAYYTVYKK---------- 138
Query: 278 LAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQALLDAGV 337
+ D I E SG + L++ RDES++VD LA+ DAQ L AG
Sbjct: 139 ----SLGDDISSETSGDFRKALLTL-------ADGRRDESLKVDEHLAKQDAQILYKAGE 187
Query: 338 KKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIVQCV 397
+WGTDE F IL RS+ QL+ TF EY ++ DI D+IKGE+SG +D L+IV CV
Sbjct: 188 NRWGTDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFEDLLLAIVNCV 247
Query: 398 KDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDC 457
++ ++LA RL A+ GIGTD+ TL RI+V+RSEIDL DI+ F K YG +L IK D
Sbjct: 248 RNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEIDLLDIRTEFKKHYGYSLYSAIKSDT 307
Query: 458 SGDYKRLLLALV 469
SGDY+ LL +
Sbjct: 308 SGDYEITLLKIC 319
Score = 214 bits (545), Expect = 7e-66
Identities = 111/324 (34%), Positives = 156/324 (48%), Gaps = 69/324 (21%)
Query: 72 MDLIRELKSELSGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGI 131
+L +LK +LSG+FE +VAL+TP AK+L K++ G GT+E AL+EILTT ++ +
Sbjct: 66 KELKDDLKGDLSGHFEHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQM 125
Query: 132 RTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQALLDA 191
+ I+Q Y T YK SL DI +TSG F++ L++L+ RDES++VD LA+ DAQ L A
Sbjct: 126 KDISQAYYTVYKKSLGDDISSETSGDFRKALLTLADGRRDESLKVDEHLAKQDAQILYKA 185
Query: 192 GVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSI 251
G +WGTDE F +IL RS
Sbjct: 186 GENRWGTDEDKF---------------------------------------TEILCLRSF 206
Query: 252 VQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKEL 311
Q L+ TF EY ++ DI D+IKGE+SG +D L+I R
Sbjct: 207 PQ--------------LKLTFDEYRNISQKDIVDSIKGELSGHFEDLLLAIVNCVRNTP- 251
Query: 312 KSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAG 371
A+ L A +K GTDE T N I+V+RS L E+++ G
Sbjct: 252 --------------AFLAERLHRA-LKGIGTDEFTLNRIMVSRSEIDLLDIRTEFKKHYG 296
Query: 372 HDIEDAIKGEMSGGVKDGFLSIVQ 395
+ + AIK + SG + L I
Sbjct: 297 YSLYSAIKSDTSGDYEITLLKICG 320
Score = 167 bits (425), Expect = 2e-48
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 42/269 (15%)
Query: 211 PTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRR 270
TV P+F+ DAEA++ A++G+GTDEK +I IL +RS QR I ++ Y
Sbjct: 10 GTVRDYPDFSPSVDAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAY----- 64
Query: 271 TFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQ 330
G +++D +KG++SG + +++ DA+
Sbjct: 65 ---------GKELKDDLKGDLSGHFEHLMVALVTPPAV------------------FDAK 97
Query: 331 ALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGF 390
L + +K GT+E IL TR+ +Q++ + Y + + D I E SG +
Sbjct: 98 QLKKS-MKGAGTNEDALIEILTTRTSRQMKDISQAYYTVYKKSLGDDISSETSGDFRKAL 156
Query: 391 LSIVQCVKDKSSYL--------ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNF 441
L++ +D+S + A+ L A GTD+ I+ RS L +
Sbjct: 157 LTLADGRRDESLKVDEHLAKQDAQILYKAGENRWGTDEDKFTEILCLRSFPQLKLTFDEY 216
Query: 442 LKLYGKTLEEYIKDDCSGDYKRLLLALVA 470
+ K + + IK + SG ++ LLLA+V
Sbjct: 217 RNISQKDIVDSIKGELSGHFEDLLLAIVN 245
Score = 84.6 bits (209), Expect = 3e-18
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 73 DLIRELKSELSGNFED---AVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNF 129
D++ +K ELSG+FED A+V + P A+ LH+A+ G+GTDE L I+ + S
Sbjct: 223 DIVDSIKGELSGHFEDLLLAIVNCVRNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEI 282
Query: 130 GIRTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQAN 169
+ I ++ Y SL IK DTSG ++ L+ + +
Sbjct: 283 DLLDIRTEFKKHYGYSLYSAIKSDTSGDYEITLLKICGGD 322
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid
binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Length = 327
Score = 280 bits (718), Expect = 1e-91
Identities = 138/373 (36%), Positives = 192/373 (51%), Gaps = 71/373 (19%)
Query: 98 PDLYAKELHKAISGLGTDEKALVEILTTLSNFGIRTITQVYETAYKASLEKDIKGDTSGH 157
PD A+ L+KA+ G+GT+E+A++++LT SN + I + ++ + L + +K + SG
Sbjct: 23 PDPDAETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAKSFKAQFGKDLTETLKSELSGK 82
Query: 158 FKRLLVSLSQANRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILQCTPTVFPAP 217
F+RL+V+L P +
Sbjct: 83 FERLIVALM------------------------------------------YPPYRY--- 97
Query: 218 NFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEE 277
+A+ L AMKGLGT E II+ILA R+ Q EI A++ YG
Sbjct: 98 ------EAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEEDYGS---------- 141
Query: 278 LAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQALLDAGV 337
+E+ I+ + SG ++ + + SR D S VDP LA DAQ L AG
Sbjct: 142 ----SLEEDIQADTSGYLERILVCLLQGSRD------DVSSFVDPALALQDAQDLYAAGE 191
Query: 338 KKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIVQCV 397
K GTDE F +IL TRS L R F+EYE++A IED+IK E G +++ L++V+C
Sbjct: 192 KIRGTDEMKFITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCT 251
Query: 398 KDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDC 457
++ SY A RL AM G GT D TLIR IV+RSEIDL IK +F K+YGKTL I +D
Sbjct: 252 QNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMYGKTLSSMIMEDT 311
Query: 458 SGDYKRLLLALVA 470
SGDYK LL+LV
Sbjct: 312 SGDYKNALLSLVG 324
Score = 210 bits (536), Expect = 1e-64
Identities = 109/324 (33%), Positives = 147/324 (45%), Gaps = 70/324 (21%)
Query: 72 MDLIRELKSELSGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGI 131
DL LKSELSG FE +VALM P AKELH A+ GLGT E ++EIL + + +
Sbjct: 69 KDLTETLKSELSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQL 128
Query: 132 RTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDE-SVEVDPQLARADAQALLD 190
R I + YE Y +SLE+DI+ DTSG+ +R+LV L Q +RD+ S VDP LA DAQ L
Sbjct: 129 REIMKAYEEDYGSSLEEDIQADTSGYLERILVCLLQGSRDDVSSFVDPALALQDAQDLYA 188
Query: 191 AGVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRS 250
AG K GTDE F I IL RS
Sbjct: 189 AGEKIRGTDEMKF---------------------------------------ITILCTRS 209
Query: 251 IVQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKE 310
L R F+EYE++A IED+IK E G +++ L++
Sbjct: 210 ATH--------------LLRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTV-------- 247
Query: 311 LKSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELA 370
V+ L A L +K GT + T +V+RS L ++++
Sbjct: 248 -------VKCTQNLHSYFA-ERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMY 299
Query: 371 GHDIEDAIKGEMSGGVKDGFLSIV 394
G + I + SG K+ LS+V
Sbjct: 300 GKTLSSMIMEDTSGDYKNALLSLV 323
Score = 174 bits (441), Expect = 1e-50
Identities = 82/272 (30%), Positives = 129/272 (47%), Gaps = 43/272 (15%)
Query: 208 QCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGK 267
Q TV + +FN DAE L AMKG+GT+E+AIID+L KRS QR +I +FK +
Sbjct: 10 QEGVTVKSSSHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAKSFKAQF-- 67
Query: 268 LRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARA 327
G D+ + +K E+SG + +++ + R
Sbjct: 68 ------------GKDLTETLKSELSGKFERLIVALMYPP------------------YRY 97
Query: 328 DAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVK 387
+A+ L DA +K GT E IL +R+ QLR K YEE G +E+ I+ + SG ++
Sbjct: 98 EAKELHDA-MKGLGTKEGVIIEILASRTKNQLREIMKAYEEDYGSSLEEDIQADTSGYLE 156
Query: 388 DGFLSIVQCVKDKSS---------YLARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDI 437
+ ++Q +D S A+ L A GTD+ I I+ TRS L +
Sbjct: 157 RILVCLLQGSRDDVSSFVDPALALQDAQDLYAAGEKIRGTDEMKFITILCTRSATHLLRV 216
Query: 438 KQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 469
+ + K+ K++E+ IK + G + +L +V
Sbjct: 217 FEEYEKIANKSIEDSIKSETHGSLEEAMLTVV 248
Score = 86.2 bits (213), Expect = 8e-19
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 72 MDLIRELKSELSGNFEDAVVALM---TPLPDLYAKELHKAISGLGTDEKALVEILTTLSN 128
+ +KSE G+ E+A++ ++ L +A+ L+ A+ G GT + L+ + + S
Sbjct: 226 KSIEDSIKSETHGSLEEAMLTVVKCTQNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSE 285
Query: 129 FGIRTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQAN 169
+ I ++ Y +L I DTSG +K L+SL ++
Sbjct: 286 IDLNLIKCHFKKMYGKTLSSMIMEDTSGDYKNALLSLVGSD 326
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal
binding protein, calcium, calcium/phospholipid-binding;
1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A
1i4a_A 1aow_A
Length = 322
Score = 279 bits (716), Expect = 2e-91
Identities = 120/368 (32%), Positives = 186/368 (50%), Gaps = 72/368 (19%)
Query: 102 AKELHKAISGLGTDEKALVEILTTLSNFGIRTITQVYETAYKASLEKDIKGDTSGHFKRL 161
A+ L KA+ GLGTDE A++ +L + + I Y++ L +D+K + S +F+++
Sbjct: 23 AQVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLEDLKSELSSNFEQV 82
Query: 162 LVSLSQANRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILQCTPTVFPAPNFNA 221
++ + ++
Sbjct: 83 ILG------------------------------------------MMTPTVLY------- 93
Query: 222 KADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEELAGH 281
D + LR AMKG GTDE +I+ILA R+ + I ++ YG+
Sbjct: 94 --DVQELRRAMKGAGTDEGCLIEILASRNPEEIRRINQTYQQQYGR-------------- 137
Query: 282 DIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQALLDAGVKKWG 341
+E+ I + S + +S+ RDE +D L + DAQ L +AG K+WG
Sbjct: 138 SLEEDICSDTSFMFQRVLVSL-------TAGGRDEGNYLDDALVKQDAQDLYEAGEKRWG 190
Query: 342 TDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIVQCVKDKS 401
TDE F SIL +R+ L F EY+ ++ DIE +IK E SG +D L+IV+C+++K
Sbjct: 191 TDEVKFLSILCSRNRNHLLHVFDEYKRISQKDIEQSIKSETSGSFEDALLAIVKCMRNKP 250
Query: 402 SYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDY 461
+Y A RL +M G+GTDD TLIR++V+R+EID+ DI+ NF +LYGK+L +IK D SGDY
Sbjct: 251 AYFAERLYKSMKGLGTDDSTLIRVMVSRAEIDMLDIRANFKRLYGKSLYSFIKGDTSGDY 310
Query: 462 KRLLLALV 469
+++LL L
Sbjct: 311 RKVLLILC 318
Score = 210 bits (535), Expect = 2e-64
Identities = 102/324 (31%), Positives = 145/324 (44%), Gaps = 69/324 (21%)
Query: 72 MDLIRELKSELSGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGI 131
DL+ +LKSELS NFE ++ +MTP +EL +A+ G GTDE L+EIL + + I
Sbjct: 65 RDLLEDLKSELSSNFEQVILGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEI 124
Query: 132 RTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQALLDA 191
R I Q Y+ Y SLE+DI DTS F+R+LVSL+ RDE +D L + DAQ L +A
Sbjct: 125 RRINQTYQQQYGRSLEEDICSDTSFMFQRVLVSLTAGGRDEGNYLDDALVKQDAQDLYEA 184
Query: 192 GVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSI 251
G K+WGTDE F + IL R+
Sbjct: 185 GEKRWGTDEVKF---------------------------------------LSILCSRNR 205
Query: 252 VQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKEL 311
L F EY+ ++ DIE +IK E SG +D L+I R K
Sbjct: 206 NH--------------LLHVFDEYKRISQKDIEQSIKSETSGSFEDALLAIVKCMRNK-- 249
Query: 312 KSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAG 371
A+ L + +K GTD+ST ++V+R+ + ++ L G
Sbjct: 250 -------------PAYFAERLYKS-MKGLGTDDSTLIRVMVSRAEIDMLDIRANFKRLYG 295
Query: 372 HDIEDAIKGEMSGGVKDGFLSIVQ 395
+ IKG+ SG + L +
Sbjct: 296 KSLYSFIKGDTSGDYRKVLLILCG 319
Score = 172 bits (436), Expect = 6e-50
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 42/268 (15%)
Query: 211 PTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRR 270
TV A FNA DA+ LR AMKGLGTDE AII +LA R+ QR EI A+K+
Sbjct: 9 GTVKAASGFNATEDAQVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTI----- 63
Query: 271 TFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQ 330
G D+ + +K E+S + L + + D Q
Sbjct: 64 ---------GRDLLEDLKSELSSNFEQVILGMMTPT------------------VLYDVQ 96
Query: 331 ALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGF 390
L A +K GTDE IL +R+ +++RR + Y++ G +E+ I + S +
Sbjct: 97 ELRRA-MKGAGTDEGCLIEILASRNPEEIRRINQTYQQQYGRSLEEDICSDTSFMFQRVL 155
Query: 391 LSIVQCVKDKSSYL--------ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNF 441
+S+ +D+ +YL A+ L +A GTD+ + I+ +R+ L + +
Sbjct: 156 VSLTAGGRDEGNYLDDALVKQDAQDLYEAGEKRWGTDEVKFLSILCSRNRNHLLHVFDEY 215
Query: 442 LKLYGKTLEEYIKDDCSGDYKRLLLALV 469
++ K +E+ IK + SG ++ LLA+V
Sbjct: 216 KRISQKDIEQSIKSETSGSFEDALLAIV 243
Score = 129 bits (326), Expect = 3e-34
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 325 ARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSG 384
A DAQ L A +K GTDE +L R+ Q + Y+ G D+ + +K E+S
Sbjct: 19 ATEDAQVLRKA-MKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLEDLKSELSS 77
Query: 385 GVKDGFLSIVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKL 444
+ L + Y + L+ AM G GTD+ LI I+ +R+ ++ I Q + +
Sbjct: 78 NFEQVILG---MMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIRRINQTYQQQ 134
Query: 445 YGKTLEEYIKDDCSGDYKRLLLALVA 470
YG++LEE I D S ++R+L++L A
Sbjct: 135 YGRSLEEDICSDTSFMFQRVLVSLTA 160
Score = 83.9 bits (207), Expect = 4e-18
Identities = 34/100 (34%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Query: 73 DLIRELKSELSGNFEDAVVALMTPL---PDLYAKELHKAISGLGTDEKALVEILTTLSNF 129
D+ + +KSE SG+FEDA++A++ + P +A+ L+K++ GLGTD+ L+ ++ + +
Sbjct: 222 DIEQSIKSETSGSFEDALLAIVKCMRNKPAYFAERLYKSMKGLGTDDSTLIRVMVSRAEI 281
Query: 130 GIRTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQAN 169
+ I ++ Y SL IKGDTSG ++++L+ L +
Sbjct: 282 DMLDIRANFKRLYGKSLYSFIKGDTSGDYRKVLLILCGGD 321
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form,
FULL-length protein comprising protein core and
N-terminal domain, metal; 1.80A {Sus scrofa} SCOP:
a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Length = 346
Score = 280 bits (718), Expect = 2e-91
Identities = 122/399 (30%), Positives = 185/399 (46%), Gaps = 73/399 (18%)
Query: 71 PMDLIRELKSELSGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFG 130
+ I+ +K G AV T P + LHKAI+ G DE ++EILT +N
Sbjct: 18 EQEYIKTVKGSKGGP-GSAVSPYPTFNPSSDVEALHKAITVKGVDEATIIEILTKRTNAQ 76
Query: 131 IRTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQALLD 190
+ I Y L++ +K +GH + + ++L
Sbjct: 77 RQQIKAAYLQEKGKPLDEALKKALTGHLEEVALAL------------------------- 111
Query: 191 AGVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRS 250
+ F+A LRAAMKGLGTDE + +ILA R+
Sbjct: 112 ----------------------LKTPAQFDAD----ELRAAMKGLGTDEDTLNEILASRT 145
Query: 251 IVQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKE 310
+ EI +K + D+ I + SG + LS+
Sbjct: 146 NREIREINRVYKEELKR--------------DLAKDITSDTSGDYQKALLSL-------A 184
Query: 311 LKSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELA 370
R E + ++ LA DA+AL +AG ++ GTD + F +IL TRSY LRR F++Y + +
Sbjct: 185 KGDRSEDLAINDDLADTDARALYEAGERRKGTDLNVFITILTTRSYPHLRRVFQKYSKYS 244
Query: 371 GHDIEDAIKGEMSGGVKDGFLSIVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRS 430
HD+ + E+ G +++ +V+C K + A +L AM GIGT KTLIRI+V+RS
Sbjct: 245 KHDMNKVLDLELKGDIENCLTVVVKCATSKPMFFAEKLHQAMKGIGTRHKTLIRIMVSRS 304
Query: 431 EIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 469
EID+ DIK + KLYG +L + I D+ GDY+++L+AL
Sbjct: 305 EIDMNDIKACYQKLYGISLCQAILDETKGDYEKILVALC 343
Score = 214 bits (546), Expect = 7e-66
Identities = 85/325 (26%), Positives = 135/325 (41%), Gaps = 69/325 (21%)
Query: 72 MDLIRELKSELSGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGI 131
L LK L+G+ E+ +AL+ A EL A+ GLGTDE L EIL + +N I
Sbjct: 90 KPLDEALKKALTGHLEEVALALLKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREI 149
Query: 132 RTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQALLDA 191
R I +VY+ K L KDI DTSG +++ L+SL++ +R E + ++ LA DA+AL +A
Sbjct: 150 REINRVYKEELKRDLAKDITSDTSGDYQKALLSLAKGDRSEDLAINDDLADTDARALYEA 209
Query: 192 GVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSI 251
G ++ GTD + F I IL RS
Sbjct: 210 GERRKGTDLNVF---------------------------------------ITILTTRSY 230
Query: 252 VQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKEL 311
LRR F++Y + + HD+ + E+ G +++ + +
Sbjct: 231 PH--------------LRRVFQKYSKYSKHDMNKVLDLELKGDIENCLTVVVKCAT---- 272
Query: 312 KSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAG 371
+ A+ L +K GT T I+V+RS + Y++L G
Sbjct: 273 ---------SKPMFFAE---KLHQAMKGIGTRHKTLIRIMVSRSEIDMNDIKACYQKLYG 320
Query: 372 HDIEDAIKGEMSGGVKDGFLSIVQC 396
+ AI E G + +++
Sbjct: 321 ISLCQAILDETKGDYEKILVALCGG 345
Score = 83.5 bits (206), Expect = 7e-18
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 73 DLIRELKSELSGNFEDAVVAL---MTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNF 129
D+ + L EL G+ E+ + + T P +A++LH+A+ G+GT K L+ I+ + S
Sbjct: 247 DMNKVLDLELKGDIENCLTVVVKCATSKPMFFAEKLHQAMKGIGTRHKTLIRIMVSRSEI 306
Query: 130 GIRTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQAN 169
+ I Y+ Y SL + I +T G ++++LV+L +
Sbjct: 307 DMNDIKACYQKLYGISLCQAILDETKGDYEKILVALCGGD 346
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane
binding, matrix vessicle, protein and metal binding
protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A
1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A
1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A
1bcw_A 2ran_A ...
Length = 320
Score = 276 bits (707), Expect = 3e-90
Identities = 122/368 (33%), Positives = 179/368 (48%), Gaps = 72/368 (19%)
Query: 102 AKELHKAISGLGTDEKALVEILTTLSNFGIRTITQVYETAYKASLEKDIKGDTSGHFKRL 161
A+ L KA+ G+GTDE+ +++ILT+ +N + I ++T + L D+K + +G F+ L
Sbjct: 20 AEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVDDLKSELTGKFETL 79
Query: 162 LVSLSQANRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILQCTPTVFPAPNFNA 221
+VSL + D
Sbjct: 80 MVSLM----RPARIFD-------------------------------------------- 91
Query: 222 KADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEELAGH 281
A AL+ A+KG GT+EK + +ILA R+ + I + Y
Sbjct: 92 ---AHALKHAIKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEA-------------- 134
Query: 282 DIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQALLDAGVKKWG 341
++ED I GE SG + + + +RD VD L DAQ L AG KWG
Sbjct: 135 NLEDKITGETSGHFQRLLVVL-------LQANRDPDGRVDEALVEKDAQVLFRAGELKWG 187
Query: 342 TDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIVQCVKDKS 401
TDE TF +IL TRS LRR F +Y ++G IE+ I E SG ++ L++V+C++
Sbjct: 188 TDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLEKLLLAVVKCIRSVP 247
Query: 402 SYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDY 461
+Y A L +M G GTDD TLIR++V+RSEIDL DI+ F K + K+L + I+ D SGDY
Sbjct: 248 AYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHEFRKNFAKSLYQMIQKDTSGDY 307
Query: 462 KRLLLALV 469
++ LL L
Sbjct: 308 RKALLLLC 315
Score = 207 bits (527), Expect = 3e-63
Identities = 104/324 (32%), Positives = 142/324 (43%), Gaps = 69/324 (21%)
Query: 72 MDLIRELKSELSGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGI 131
DL+ +LKSEL+G FE +V+LM P A L AI G GT+EK L EIL + + +
Sbjct: 62 RDLVDDLKSELTGKFETLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEV 121
Query: 132 RTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQALLDA 191
+ I QVY Y+A+LE I G+TSGHF+RLLV L QANRD VD L DAQ L A
Sbjct: 122 QNIKQVYMQEYEANLEDKITGETSGHFQRLLVVLLQANRDPDGRVDEALVEKDAQVLFRA 181
Query: 192 GVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSI 251
G KWGTDE TF I IL RS+
Sbjct: 182 GELKWGTDEETF---------------------------------------ITILGTRSV 202
Query: 252 VQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKEL 311
LRR F +Y ++G IE+ I E SG ++ L++ R+
Sbjct: 203 SH--------------LRRVFDKYMTISGFQIEETIDRETSGDLEKLLLAVVKCIRSV-- 246
Query: 312 KSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAG 371
A+ L + +K GTD+ T ++V+RS L E+ +
Sbjct: 247 -------------PAYFAETLYYS-MKGAGTDDDTLIRVMVSRSEIDLLDIRHEFRKNFA 292
Query: 372 HDIEDAIKGEMSGGVKDGFLSIVQ 395
+ I+ + SG + L +
Sbjct: 293 KSLYQMIQKDTSGDYRKALLLLCG 316
Score = 168 bits (427), Expect = 1e-48
Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 42/268 (15%)
Query: 211 PTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRR 270
TV F+A+ADAEALR AMKG+GTDE+ I+ IL R+ QR EI AFKTL+
Sbjct: 6 GTVTAFSPFDARADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLF----- 60
Query: 271 TFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQ 330
G D+ D +K E++G + +S+ + DA
Sbjct: 61 ---------GRDLVDDLKSELTGKFETLMVSLMRPA------------------RIFDAH 93
Query: 331 ALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGF 390
AL A +K GT+E IL +R+ +++ + Y + ++ED I GE SG +
Sbjct: 94 ALKHA-IKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEANLEDKITGETSGHFQRLL 152
Query: 391 LSIVQCVKDKSSYL--------ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNF 441
+ ++Q +D + A+ L A GTD++T I I+ TRS L + +
Sbjct: 153 VVLLQANRDPDGRVDEALVEKDAQVLFRAGELKWGTDEETFITILGTRSVSHLRRVFDKY 212
Query: 442 LKLYGKTLEEYIKDDCSGDYKRLLLALV 469
+ + G +EE I + SGD ++LLLA+V
Sbjct: 213 MTISGFQIEETIDRETSGDLEKLLLAVV 240
Score = 127 bits (319), Expect = 4e-33
Identities = 50/146 (34%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Query: 325 ARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSG 384
ARADA+AL A K GTDE T IL +R+ Q + ++ L G D+ D +K E++G
Sbjct: 16 ARADAEALRKAM-KGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVDDLKSELTG 74
Query: 385 GVKDGFLSIVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKL 444
+ +V ++ + A LK A+ G GT++K L I+ +R+ ++ +IKQ +++
Sbjct: 75 KFETL---MVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNIKQVYMQE 131
Query: 445 YGKTLEEYIKDDCSGDYKRLLLALVA 470
Y LE+ I + SG ++RLL+ L+
Sbjct: 132 YEANLEDKITGETSGHFQRLLVVLLQ 157
Score = 88.1 bits (218), Expect = 2e-19
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 72 MDLIRELKSELSGNFED---AVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSN 128
+ + E SG+ E AVV + +P +A+ L+ ++ G GTD+ L+ ++ + S
Sbjct: 218 FQIEETIDRETSGDLEKLLLAVVKCIRSVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSE 277
Query: 129 FGIRTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRD 171
+ I + + SL + I+ DTSG +++ L+ L + +
Sbjct: 278 IDLLDIRHEFRKNFAKSLYQMIQKDTSGDYRKALLLLCGGDDE 320
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation,
mutant T356D, lipid binding protein; 2.65A {Homo
sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Length = 672
Score = 283 bits (724), Expect = 2e-88
Identities = 127/403 (31%), Positives = 192/403 (47%), Gaps = 67/403 (16%)
Query: 67 TWAGPMDLIRELKSELSGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTL 126
A + EL + + V PD AK L KA+ GLGTDE +++I+T
Sbjct: 333 EAAQVAYQMWELSAVARVELKGDVRPANDFNPDADAKALRKAMKGLGTDEDTIIDIITHR 392
Query: 127 SNFGIRTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQ 186
SN + I Q +++ + L D+K + SG RL++ L
Sbjct: 393 SNVQRQQIRQTFKSHFGRDLMTDLKSEISGDLARLILGLMMPP----------------- 435
Query: 187 ALLDAGVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDIL 246
A DA+ L+ AM+G GTDEKA+I+IL
Sbjct: 436 ----------------------------------AHYDAKQLKKAMEGAGTDEKALIEIL 461
Query: 247 AKRSIVQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDS 306
A R+ + I +A+K Y K +EDA+ + SG + +S+
Sbjct: 462 ATRTNAEIRAINEAYKEDYHK--------------SLEDALSSDTSGHFRRILISLATGH 507
Query: 307 RAKELKSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEY 366
R + + + A+ + D + E+ F +IL TRSY LRR F+E+
Sbjct: 508 REEG--GENLDQAREDAQVAAEILEIADTPSGDKTSLETRFMTILCTRSYPHLRRVFQEF 565
Query: 367 EELAGHDIEDAIKGEMSGGVKDGFLSIVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRII 426
++ +D+E IK EMSG V+D F++IVQ VK+K + A +L +M G GTDDKTL RI+
Sbjct: 566 IKMTNYDVEHTIKKEMSGDVRDAFVAIVQSVKNKPLFFADKLYKSMKGAGTDDKTLTRIM 625
Query: 427 VTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 469
V+RSEIDL +I++ F++ Y K+L + I+ D SGD+ + LLAL
Sbjct: 626 VSRSEIDLLNIRREFIEKYDKSLHQAIEGDTSGDFLKALLALC 668
Score = 275 bits (704), Expect = 1e-85
Identities = 122/372 (32%), Positives = 186/372 (50%), Gaps = 72/372 (19%)
Query: 98 PDLYAKELHKAISGLGTDEKALVEILTTLSNFGIRTITQVYETAYKASLEKDIKGDTSGH 157
P+ A+ L+ A+ G G+D++A+++I+T+ SN + + Q Y++ Y L D+K + +G
Sbjct: 21 PNQDAEALYTAMKGFGSDKEAILDIITSRSNRQRQEVCQSYKSLYGKDLIADLKYELTGK 80
Query: 158 FKRLLVSLSQANRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILQCTPTVFPAP 217
F+RL+V L A DA
Sbjct: 81 FERLIVGL-----------------MRPPAYCDA-------------------------- 97
Query: 218 NFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEE 277
+ ++ A+ G+GTDEK +I+ILA R+ Q ++ A+K Y +
Sbjct: 98 --------KEIKDAISGIGTDEKCLIEILASRTNEQMHQLVAAYKDAYER---------- 139
Query: 278 LAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQALLDAGV 337
D+E I G+ SG + + + +R+E V L + D Q L +AG
Sbjct: 140 ----DLEADIIGDTSGHFQKMLVVL-------LQGTREEDDVVSEDLVQQDVQDLYEAGE 188
Query: 338 KKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIVQCV 397
KWGTDE+ F IL RS Q LR F EY + G IE +I+GE+SG + L++V+C+
Sbjct: 189 LKWGTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAVVKCI 248
Query: 398 KDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDC 457
+ Y A RL AM G+GT D TLIRI+V+RSE+D+ DI++ F Y K+L IK+D
Sbjct: 249 RSTPEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIFRTKYEKSLYSMIKNDT 308
Query: 458 SGDYKRLLLALV 469
SG+YK+ LL L
Sbjct: 309 SGEYKKTLLKLS 320
Score = 256 bits (656), Expect = 1e-78
Identities = 128/435 (29%), Positives = 180/435 (41%), Gaps = 106/435 (24%)
Query: 72 MDLIRELKSELSGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGI 131
DLI +LK EL+G FE +V LM P AKE+ AISG+GTDEK L+EIL + +N +
Sbjct: 67 KDLIADLKYELTGKFERLIVGLMRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQM 126
Query: 132 RTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQALLDA 191
+ Y+ AY+ LE DI GDTSGHF+++LV L Q R+E V L + D Q L +A
Sbjct: 127 HQLVAAYKDAYERDLEADIIGDTSGHFQKMLVVLLQGTREEDDVVSEDLVQQDVQDLYEA 186
Query: 192 GVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSI 251
G KWGTDE+ F I IL RS
Sbjct: 187 GELKWGTDEAQF---------------------------------------IYILGNRSK 207
Query: 252 VQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKEL 311
LR F EY + G IE +I+GE+SG + L++
Sbjct: 208 QH--------------LRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAV--------- 244
Query: 312 KSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAG 371
A+ L +K GT ++T I+V+RS + + +
Sbjct: 245 ----VKCIRSTPEYFAE---RLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIFRTKYE 297
Query: 372 HDIEDAIKGEMSGGVKDGFLSIVQCVKDKSSYL--------------------------- 404
+ IK + SG K L + D +
Sbjct: 298 KSLYSMIKNDTSGEYKKTLLKLSGGDDDAAGQFFPEAAQVAYQMWELSAVARVELKGDVR 357
Query: 405 ----------ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 454
A+ L+ AM G+GTD+ T+I II RS + I+Q F +G+ L +K
Sbjct: 358 PANDFNPDADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRDLMTDLK 417
Query: 455 DDCSGDYKRLLLALV 469
+ SGD RL+L L+
Sbjct: 418 SEISGDLARLILGLM 432
Score = 242 bits (618), Expect = 5e-73
Identities = 118/414 (28%), Positives = 192/414 (46%), Gaps = 61/414 (14%)
Query: 73 DLIRELKSELSGNFEDAVVAL---MTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNF 129
+ ++ ELSG+FE ++A+ + P+ +A+ L KA+ GLGT + L+ I+ + S
Sbjct: 224 PIEASIRGELSGDFEKLMLAVVKCIRSTPEYFAERLFKAMKGLGTRDNTLIRIMVSRSEL 283
Query: 130 GIRTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQALL 189
+ I +++ T Y+ SL IK DTSG +K+ L+ LS + D + + P+ A+ Q
Sbjct: 284 DMLDIREIFRTKYEKSLYSMIKNDTSGEYKKTLLKLSGGDDDAAGQFFPEAAQVAYQMWE 343
Query: 190 DAGVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKR 249
+ V + + V PA +FN ADA+ALR AMKGLGTDE IIDI+ R
Sbjct: 344 LSAVARV-----------ELKGDVRPANDFNPDADAKALRKAMKGLGTDEDTIIDIITHR 392
Query: 250 SIVQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAK 309
S VQR +I FK+ + G D+ +K E+SG + L +
Sbjct: 393 SNVQRQQIRQTFKSHF--------------GRDLMTDLKSEISGDLARLILGLMMP---- 434
Query: 310 ELKSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEEL 369
A DA+ L A ++ GTDE IL TR+ ++R + Y+E
Sbjct: 435 --------------PAHYDAKQLKKA-MEGAGTDEKALIEILATRTNAEIRAINEAYKED 479
Query: 370 AGHDIEDAIKGEMSGGVKDGFLSIVQCVKDKSSY-------------LARRLKDAMAG-I 415
+EDA+ + SG + +S+ +++ + D +G
Sbjct: 480 YHKSLEDALSSDTSGHFRRILISLATGHREEGGENLDQAREDAQVAAEILEIADTPSGDK 539
Query: 416 GTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 469
+ + + I+ TRS L + Q F+K+ +E IK + SGD + +A+V
Sbjct: 540 TSLETRFMTILCTRSYPHLRRVFQEFIKMTNYDVEHTIKKEMSGDVRDAFVAIV 593
Score = 212 bits (542), Expect = 4e-62
Identities = 94/330 (28%), Positives = 140/330 (42%), Gaps = 74/330 (22%)
Query: 72 MDLIRELKSELSGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGI 131
DL+ +LKSE+SG+ ++ LM P AK+L KA+ G GTDEKAL+EIL T +N I
Sbjct: 410 RDLMTDLKSEISGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEI 469
Query: 132 RTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVE-----VDPQLARADAQ 186
R I + Y+ Y SLE + DTSGHF+R+L+SL+ +R+E E + A+
Sbjct: 470 RAINEAYKEDYHKSLEDALSSDTSGHFRRILISLATGHREEGGENLDQAREDAQVAAEIL 529
Query: 187 ALLDAGVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDIL 246
+ D + E+ F + IL
Sbjct: 530 EIADTPSGDKTSLETRF---------------------------------------MTIL 550
Query: 247 AKRSIVQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDS 306
RS LRR F+E+ ++ +D+E IK EMSG V+D F++I
Sbjct: 551 CTRSYPH--------------LRRVFQEFIKMTNYDVEHTIKKEMSGDVRDAFVAI---- 592
Query: 307 RAKELKSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEY 366
V+ A L + TD+ T I+V+RS L +E+
Sbjct: 593 -----------VQSVKNKPLFFADKLYKSMKGAG-TDDKTLTRIMVSRSEIDLLNIRREF 640
Query: 367 EELAGHDIEDAIKGEMSGGVKDGFLSIVQC 396
E + AI+G+ SG L++
Sbjct: 641 IEKYDKSLHQAIEGDTSGDFLKALLALCGG 670
Score = 207 bits (529), Expect = 3e-60
Identities = 102/432 (23%), Positives = 176/432 (40%), Gaps = 100/432 (23%)
Query: 73 DLIRELKSELSGNFEDAVVALMT-----------PLPDLYAKELHKAISG-LGTDEKALV 120
DL ++ + SG+F+ +V L+ L ++L++A GTDE +
Sbjct: 140 DLEADIIGDTSGHFQKMLVVLLQGTREEDDVVSEDLVQQDVQDLYEAGELKWGTDEAQFI 199
Query: 121 EILTTLSNFGIRTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQL 180
IL S +R + Y +E I+G+ SG F++L++++ + R
Sbjct: 200 YILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAVVKCIRS--------- 250
Query: 181 ARADAQALLDAGVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEK 240
+ AE L AMKGLGT +
Sbjct: 251 ---------------------------------------TPEYFAERLFKAMKGLGTRDN 271
Query: 241 AIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFL 300
+I I+ RS + ++I + F+T Y K + IK + SG K L
Sbjct: 272 TLIRIMVSRSELDMLDIREIFRTKYEK--------------SLYSMIKNDTSGEYKKTLL 317
Query: 301 SI----------------------GFDSRAKELKSRDESVEVDPQLARADAQALLDAGVK 338
+ S ++ + + + ADA+AL A +K
Sbjct: 318 KLSGGDDDAAGQFFPEAAQVAYQMWELSAVARVELKGDVRPANDFNPDADAKALRKA-MK 376
Query: 339 KWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIVQCVK 398
GTDE T I+ RS Q ++ + ++ G D+ +K E+SG + + +
Sbjct: 377 GLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRDLMTDLKSEISGDLARLI---LGLMM 433
Query: 399 DKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCS 458
+ Y A++LK AM G GTD+K LI I+ TR+ ++ I + + + Y K+LE+ + D S
Sbjct: 434 PPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIRAINEAYKEDYHKSLEDALSSDTS 493
Query: 459 GDYKRLLLALVA 470
G ++R+L++L
Sbjct: 494 GHFRRILISLAT 505
Score = 172 bits (437), Expect = 3e-47
Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 42/266 (15%)
Query: 211 PTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRR 270
++ P F+ DAEAL AMKG G+D++AI+DI+ RS QR E+ ++K+LY
Sbjct: 11 GSIHDFPGFDPNQDAEALYTAMKGFGSDKEAILDIITSRSNRQRQEVCQSYKSLY----- 65
Query: 271 TFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQ 330
G D+ +K E++G + + + A DA+
Sbjct: 66 ---------GKDLIADLKYELTGKFERLIVGLMRP------------------PAYCDAK 98
Query: 331 ALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGF 390
+ DA + GTDE IL +R+ +Q+ + Y++ D+E I G+ SG +
Sbjct: 99 EIKDA-ISGIGTDEKCLIEILASRTNEQMHQLVAAYKDAYERDLEADIIGDTSGHFQKML 157
Query: 391 LSIVQCVKDKSSYL--------ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNF 441
+ ++Q +++ + + L +A GTD+ I I+ RS+ L + +
Sbjct: 158 VVLLQGTREEDDVVSEDLVQQDVQDLYEAGELKWGTDEAQFIYILGNRSKQHLRLVFDEY 217
Query: 442 LKLYGKTLEEYIKDDCSGDYKRLLLA 467
LK GK +E I+ + SGD+++L+LA
Sbjct: 218 LKTTGKPIEASIRGELSGDFEKLMLA 243
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A
{Giardia intestinalis} PDB: 2iic_A
Length = 310
Score = 254 bits (651), Expect = 9e-82
Identities = 40/368 (10%), Positives = 98/368 (26%), Gaps = 80/368 (21%)
Query: 102 AKELHKAISGLGTDEKALVEILTTLSNFGIRTITQVYETAYKASLEKDIKGD-TSGHFKR 160
E+ + +E+ LV + S + + ++ +K +G ++
Sbjct: 10 IPEVKAILEA--KNEEELVTFTSRWSAEERKELRTQFQDTTGLEFIAFLKKCIKNGPYED 67
Query: 161 LLVSLSQANRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILQCTPTVFPAPNFN 220
++ W +
Sbjct: 68 VMALG------------------------------WDCN--------------------- 76
Query: 221 AKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEELAG 280
A ++ AMK D +AI D++ + +R+++ A+K G
Sbjct: 77 ISARVNVIKKAMKN-VNDFRAIHDVVLIATPDERLKLAQAYKEKTGN------------- 122
Query: 281 HDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQALLDAGVKKW 340
D+ ++ + + +DA+ L +
Sbjct: 123 -DLLQDFVDQIPLT----------SAASYLCHLAIRENRTPRGSVASDAEVLKHNLIDAD 171
Query: 341 GTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGV-KDGFLSIVQCVKD 399
D +++T + + + +E L G +++AI+ + G
Sbjct: 172 EPDHEAVVRLIITSTADEYKEINHRFEVLTGKSVQEAIETRYADKENARGLCIAHYYNLA 231
Query: 400 KSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSG 459
+ +A A+ D +T DL +G ++ + S
Sbjct: 232 PARAVAYAFHSAVETQNDDMAYEQAARITGLFHDLHKFAWVHYACWGVMRDDILSRFQSK 291
Query: 460 DYKRLLLA 467
+ ++
Sbjct: 292 EANKVNFR 299
Score = 182 bits (463), Expect = 6e-54
Identities = 38/322 (11%), Positives = 82/322 (25%), Gaps = 77/322 (23%)
Query: 73 DLIRELKSEL-SGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGI 131
+ I LK + +G +ED + + KA+ D +A+ +++ +
Sbjct: 51 EFIAFLKKCIKNGPYEDVMALGWDCNISARVNVIKKAMKN-VNDFRAIHDVVLIATPDER 109
Query: 132 RTITQVYETAYKASLEKDIKGD--TSGHFKRLLVSLSQANRDESVEVDPQLARADAQALL 189
+ Q Y+ L +D + L + NR +DA+ L
Sbjct: 110 LKLAQAYKEKTGNDLLQDFVDQIPLTSAASYLCHLAIRENR-----TPRGSVASDAEVLK 164
Query: 190 DAGVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKR 249
+ D + ++
Sbjct: 165 HNLIDADEPDHEAV---------------------------------------VRLIITS 185
Query: 250 SIVQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAK 309
+ + + +E L G +++AI+ + L I
Sbjct: 186 TADE--------------YKEINHRFEVLTGKSVQEAIETRYADKENARGLCIAHYYN-- 229
Query: 310 ELKSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEEL 369
+ P A A + V+ D + + +T + L + +
Sbjct: 230 ----------LAPARAVAY---AFHSAVETQNDDMAYEQAARITGLFHDLHKFAWVHYAC 276
Query: 370 AGHDIEDAIKGEMSGGVKDGFL 391
G +D + S
Sbjct: 277 WGVMRDDILSRFQSKEANKVNF 298
Score = 135 bits (342), Expect = 1e-36
Identities = 34/259 (13%), Positives = 90/259 (34%), Gaps = 41/259 (15%)
Query: 217 PNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYE 276
P + ++A ++ +E+ ++ ++ S +R E+ F+ G
Sbjct: 2 PLGSYGDAIPEVKAILEA--KNEEELVTFTSRWSAEERKELRTQFQDTTGL--------- 50
Query: 277 ELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQALLDAG 336
+ +K + G + +++G+D + A
Sbjct: 51 -----EFIAFLKKCIKNGPYEDVMALGWDCNISA-----------------RVNVIKKAM 88
Query: 337 VKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEM--SGGVKDGFLSIV 394
K D + +++ + + + + Y+E G+D+ ++ + +
Sbjct: 89 --KNVNDFRAIHDVVLIATPDERLKLAQAYKEKTGNDLLQDFVDQIPLTSAASYLCHLAI 146
Query: 395 QCVKDKSSYL---ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLE 450
+ + + A LK + D + ++R+I+T + + +I F L GK+++
Sbjct: 147 RENRTPRGSVASDAEVLKHNLIDADEPDHEAVVRLIITSTADEYKEINHRFEVLTGKSVQ 206
Query: 451 EYIKDDCSGDYKRLLLALV 469
E I+ + L +
Sbjct: 207 EAIETRYADKENARGLCIA 225
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein;
1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Length = 337
Score = 238 bits (608), Expect = 5e-75
Identities = 63/373 (16%), Positives = 110/373 (29%), Gaps = 79/373 (21%)
Query: 102 AKELHKAISGLGTDEKA--LVEILTTLSNFGIRTITQVYETAYKASLEKDIKGDTSGHFK 159
+ K + + K L+EI + +R + + ++ L+ +K S F+
Sbjct: 13 TAVVQKVVEACQDESKRLDLIEIARSYPPNQLRNMQRTFQAITGTFLDAFLKKHLSKDFE 72
Query: 160 RLLVSLSQANRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILQCTPTVFPAPNF 219
L++ L
Sbjct: 73 SLVLM------------------------------------------LYKPRAQL----- 85
Query: 220 NAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEELA 279
E +R A KG GTDEK ++D+L + EI + LY
Sbjct: 86 ----LCELIRGATKGAGTDEKCLVDVLLTIETHEVREIRQLYYQLYND------------ 129
Query: 280 GHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQALLDAGVKK 339
+ D ++ + L + + D D + A K
Sbjct: 130 --SLGDVVRKDCGDKYMWAKLINAVATGDRI--------PRDTHELEEDLVLVRKAIETK 179
Query: 340 W--GTDESTFNSILVTRSYQQLRRTFKEYE-ELAGHDIEDAIKGEMSGGVKDGFLSIVQC 396
+ ST+ I T + R+ K Y + G + ++ E G + F
Sbjct: 180 GVKKDEVSTWIRIFATYTRADFRQLHKMYSAKYNGDSLRAGVEDEFQGLDEYAFKLAHDF 239
Query: 397 VKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIKDD 456
+ D A + A AG G+D L RI + K + K+YG+ +E +
Sbjct: 240 LYDPCCAAAFSMNVAFAGSGSDSNRLNRITAMHFR-ECKGCKYYYKKVYGQAFDERCATE 298
Query: 457 CSGDYKRLLLALV 469
G Y + L
Sbjct: 299 LKGVYGDAIKLLW 311
Score = 187 bits (475), Expect = 2e-55
Identities = 60/345 (17%), Positives = 103/345 (29%), Gaps = 74/345 (21%)
Query: 72 MDLIRELKSELSGNFEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGI 131
L LK LS +FE V+ L P L + + A G GTDEK LV++L T+ +
Sbjct: 57 TFLDAFLKKHLSKDFESLVLMLYKPRAQLLCELIRGATKGAGTDEKCLVDVLLTIETHEV 116
Query: 132 RTITQVYETAYKASLEKDIKGDTSGHF--KRLLVSLSQANRDESVEVDPQLARADAQALL 189
R I Q+Y Y SL ++ D + +L+ +++ +R D D +
Sbjct: 117 REIRQLYYQLYNDSLGDVVRKDCGDKYMWAKLINAVATGDRI---PRDTHELEEDLVLVR 173
Query: 190 DAGVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKR 249
A K + I I A
Sbjct: 174 KAIETKGVK-------------------------------------KDEVSTWIRIFATY 196
Query: 250 SIVQRMEITDAFKTLYGKLRRTFKEYE-ELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRA 308
+ R+ K Y + G + ++ E G + F
Sbjct: 197 TRAD--------------FRQLHKMYSAKYNGDSLRAGVEDEFQGLDEYAFKLA------ 236
Query: 309 KELKSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEE 368
DP A A ++ G+D + N I ++ + Y++
Sbjct: 237 --HDFL-----YDPCCAAAF---SMNVAFAGSGSDSNRLNRITAMHF-RECKGCKYYYKK 285
Query: 369 LAGHDIEDAIKGEMSGGVKDGFLSIVQCVKDKSSYLARRLKDAMA 413
+ G ++ E+ G D + + V +
Sbjct: 286 VYGQAFDERCATELKGVYGDAIKLLWEPVTVPLLSMDDYQGSEQH 330
Score = 129 bits (325), Expect = 7e-34
Identities = 38/269 (14%), Positives = 82/269 (30%), Gaps = 47/269 (17%)
Query: 215 PAPNFNAKADAEA-LRAAMKGLGTDEKA--IIDILAKRSIVQRMEITDAFKTLYGKLRRT 271
N+ A ++ ++ + K +I+I Q + F+ +
Sbjct: 2 ANKNYQMSTGVTAVVQKVVEACQDESKRLDLIEIARSYPPNQLRNMQRTFQAIT------ 55
Query: 272 FKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQA 331
G ++ +K +S + L + K R + +
Sbjct: 56 --------GTFLDAFLKKHLSKDFESLVLML--------YKPRAQL----------LCEL 89
Query: 332 LLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFL 391
+ A K GTDE +L+T ++R + Y +L + D ++ + L
Sbjct: 90 IRGA-TKGAGTDEKCLVDVLLTIETHEVREIRQLYYQLYNDSLGDVVRKDCGDKYMWAKL 148
Query: 392 SIVQCV-------KDKSSYLARRLKDAMAGI---GTDDKTLIRIIVTRSEIDLGDIKQNF 441
+ ++ A+ + T IRI T + D + + +
Sbjct: 149 INAVATGDRIPRDTHELEEDLVLVRKAIETKGVKKDEVSTWIRIFATYTRADFRQLHKMY 208
Query: 442 LKLY-GKTLEEYIKDDCSGDYKRLLLALV 469
Y G +L ++D+ G +
Sbjct: 209 SAKYNGDSLRAGVEDEFQGLDEYAFKLAH 237
Score = 117 bits (293), Expect = 2e-29
Identities = 29/150 (19%), Positives = 68/150 (45%), Gaps = 7/150 (4%)
Query: 325 ARADAQALLDAGVKKWGTDESTFN--SILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEM 382
A++ V+ + + I + QLR + ++ + G ++ +K +
Sbjct: 8 MSTGVTAVVQKVVEACQDESKRLDLIEIARSYPPNQLRNMQRTFQAITGTFLDAFLKKHL 67
Query: 383 SGGVKDGFLSIVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFL 442
S + ++ K ++ L ++ A G GTD+K L+ +++T ++ +I+Q +
Sbjct: 68 SKDFESL---VLMLYKPRAQLLCELIRGATKGAGTDEKCLVDVLLTIETHEVREIRQLYY 124
Query: 443 KLYGKTLEEYIKDDCSGDY--KRLLLALVA 470
+LY +L + ++ DC Y +L+ A+
Sbjct: 125 QLYNDSLGDVVRKDCGDKYMWAKLINAVAT 154
Score = 82.4 bits (203), Expect = 2e-17
Identities = 17/120 (14%), Positives = 37/120 (30%), Gaps = 4/120 (3%)
Query: 73 DLIRELKSELSGNFEDA---VVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNF 129
L ++ E G E A + A ++ A +G G+D L I
Sbjct: 216 SLRAGVEDEFQGLDEYAFKLAHDFLYDPCCAAAFSMNVAFAGSGSDSNRLNRITAMHFRE 275
Query: 130 GIRTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQALL 189
+ Y+ Y + ++ + G + + L + + +D + +
Sbjct: 276 -CKGCKYYYKKVYGQAFDERCATELKGVYGDAIKLLWEPVTVPLLSMDDYQGSEQHRPMT 334
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding
protein, membrane-binding protein, binding protein;
1.90A {Giardia intestinalis} PDB: 4evh_A
Length = 295
Score = 224 bits (572), Expect = 3e-70
Identities = 59/373 (15%), Positives = 99/373 (26%), Gaps = 83/373 (22%)
Query: 96 PLPDLYAKELHKAISGLGTDEKALVEILTTLSNFGIRTITQVYETAYKASLEKDIKGDTS 155
P A EL +AI DE + I + S I + Y +Y L DIK
Sbjct: 2 PKVTDIANELKQAIDA--KDEVQIAFIASEYSAESREKIAKAYVASYGKELPDDIKKALK 59
Query: 156 GHFKRLLVSLSQANRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILQCTPTVFP 215
G + L+ ++R E
Sbjct: 60 GGSEESLLMDLFSDRHE------------------------------------------- 76
Query: 216 APNFNAKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEY 275
A+ +R A+ G D A D + + E A+ ++ K
Sbjct: 77 -------VRAQHIRDALSG-RNDHMAFFDTVILCTPEDWHETVAAYTRMFKK-------- 120
Query: 276 EELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQALLDA 335
+ + ++ L + P +AQ L A
Sbjct: 121 ------PLVEDFMKDVGRKEDWCLLMEKW---------MAHERVSRPGSPEDEAQRLDQA 165
Query: 336 GVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIVQ 395
+K + + T + R + ++ G IE AI + F
Sbjct: 166 FDQK---NTAYLIDFFGTVPSAEYRPIAEAFKAQNGKSIEQAIATIYTKTDYYTFYCAHF 222
Query: 396 CVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIKD 455
+ A + A G + + RI + L K K+YG + I+
Sbjct: 223 ALLGMHRLAAYLINCACNDKGDEK-RMRRITGMMVDKCL-GAKH-AYKIYGD-MGTDIER 278
Query: 456 DCSGDYKRLLLAL 468
+L L
Sbjct: 279 CFDKRMAPILRTL 291
Score = 168 bits (427), Expect = 8e-49
Identities = 42/323 (13%), Positives = 81/323 (25%), Gaps = 80/323 (24%)
Query: 72 MDLIRELKSELSGN-FEDAVVALMTPLPDLYAKELHKAISGLGTDEKALVEILTTLSNFG 130
+L ++K L G E ++ L + ++ A+ + A+SG D A + + +
Sbjct: 48 KELPDDIKKALKGGSEESLLMDLFSDRHEVRAQHIRDALSG-RNDHMAFFDTVILCTPED 106
Query: 131 IRTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDESVEVDPQLARADAQALLD 190
Y +K L +D D L+ + P +AQ L
Sbjct: 107 WHETVAAYTRMFKKPLVEDFMKDVGRKEDWCLLMEKWMAHER--VSRPGSPEDEAQRLDQ 164
Query: 191 AGVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMKGLGTDEKAIIDILAKRS 250
A +K + +ID
Sbjct: 165 AFDQK------------------------------------------NTAYLIDFFGTVP 182
Query: 251 IVQRMEITDAFKTLYGKLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKE 310
+ R + ++ G IE AI + F
Sbjct: 183 SAE--------------YRPIAEAFKAQNGKSIEQAIATIYTKTDYYTFYCA-------- 220
Query: 311 LKSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQQLRRTFKEYEELA 370
+ R A + A G ++ +T K ++
Sbjct: 221 -------HFALLGMHRLAAYLINCA-CNDKGDEKRM---RRITGMMVDKCLGAKHAYKIY 269
Query: 371 GHDIEDAIKGEMSGGVKDGFLSI 393
G D+ I+ + ++
Sbjct: 270 G-DMGTDIERCFDKRMAPILRTL 291
Score = 153 bits (388), Expect = 3e-43
Identities = 43/253 (16%), Positives = 75/253 (29%), Gaps = 39/253 (15%)
Query: 221 AKADAEALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEELAG 280
A L+ A+ DE I I ++ S R +I A+ YGK
Sbjct: 4 VTDIANELKQAIDA--KDEVQIAFIASEYSAESREKIAKAYVASYGK------------- 48
Query: 281 HDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADAQALLDAGVKKW 340
++ D IK + GG ++ L F R + AQ + DA
Sbjct: 49 -ELPDDIKKALKGGSEESLLMDLFSDRHE-----------------VRAQHIRDA--LSG 88
Query: 341 GTDESTFNSILVTRSYQQLRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIVQCVKDK 400
D F ++ + + T Y + + + ++ L ++
Sbjct: 89 RNDHMAFFDTVILCTPEDWHETVAAYTRMFKKPLVEDFMKDVGRKEDWCLLMEKWMAHER 148
Query: 401 SSYLARRLKDAM----AGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIKDD 456
S +A A + LI T + I + F GK++E+ I
Sbjct: 149 VSRPGSPEDEAQRLDQAFDQKNTAYLIDFFGTVPSAEYRPIAEAFKAQNGKSIEQAIATI 208
Query: 457 CSGDYKRLLLALV 469
+
Sbjct: 209 YTKTDYYTFYCAH 221
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 57.2 bits (137), Expect = 7e-09
Identities = 73/466 (15%), Positives = 135/466 (28%), Gaps = 131/466 (28%)
Query: 7 MEG----TVTAMVLS-----------------RNRREKEDKIEESQPFRERTLSVQ-DRI 44
+ G V V +N E +E Q L Q D
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ-----KLLYQIDPN 212
Query: 45 LPGRESNPQPSFYKAHALPTKLTWAGPMDLIRELKSELSGNFEDAVVALMTPLPDLYAKE 104
R + + H++ +L R LKS+ N L+ L ++ +
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELR--------RLLKSKPYEN------CLLV-LLNVQNAK 257
Query: 105 LHKAISGLGTDEKALVEILTTLSNFGIRTITQVYETAYKASLEKDIKGDTSGHFKRLLVS 164
A L K L+ TT + T SL+ T K LL+
Sbjct: 258 AWNAF-NLSC--KILL---TT-RFKQVTDFLSAATT-THISLDHHSMTLTPDEVKSLLLK 309
Query: 165 -LSQANRD---ESVEVDPQLARADAQALLDAGVKKWGT----DESTFNSILQC-----TP 211
L +D E + +P + + G+ W + +I++ P
Sbjct: 310 YLDCRPQDLPREVLTTNP-RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP 368
Query: 212 ----------TVFPAPNFNAKADAEALR---AAMKGLGTDEKAIIDILAKRSIVQRMEIT 258
+VFP +A L + +D +++ L K S+V++
Sbjct: 369 AEYRKMFDRLSVFPP---SAHIPTILLSLIWFDVIK--SDVMVVVNKLHKYSLVEK---- 419
Query: 259 DAFKTLYG----------------KLRRTFKE-YEELAGHDIEDAIKGEMSGGVKDG--F 299
++ L R+ + Y D +D I + D +
Sbjct: 420 QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL-----DQYFY 474
Query: 300 LSIGFDSRAKELKSRDESVEVDPQLARADAQALLD-----AGVKK----WGTDESTFNSI 350
IG + E E + + + LD ++ W S N++
Sbjct: 475 SHIGHHLKNIE---HPERMTLFRMV-------FLDFRFLEQKIRHDSTAWNASGSILNTL 524
Query: 351 LVTRSYQQ-LRRTFKEYEELAGHDIEDAIKGEMSGGVKDGFLSIVQ 395
+ Y+ + +YE L I D + + + +++
Sbjct: 525 QQLKFYKPYICDNDPKYERLVN-AILDFLPKIEENLICSKYTDLLR 569
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 52.7 bits (126), Expect = 2e-07
Identities = 44/294 (14%), Positives = 88/294 (29%), Gaps = 118/294 (40%)
Query: 28 EESQPFRERTLSVQDRILPGRESNPQPSFYKAHALPTKLTWAGPMDLI------------ 75
E+ + RE ++ + + + F + + T T+ L+
Sbjct: 1679 EKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTL 1738
Query: 76 ------RELKSELSGNF-EDAVVALMTPLPDLYAKELHKAISG--LGTDE-KALV---EI 122
+LKS+ G DA A G LG E AL ++
Sbjct: 1739 MEKAAFEDLKSK--GLIPADATFA------------------GHSLG--EYAALASLADV 1776
Query: 123 LTTLSNFGIRTITQVYETAYKASLEKDIKGDTSGHFKRLLVSLSQANRDES-------VE 175
+ ++ + + + F R + RDE +
Sbjct: 1777 M-SIES-LVEVV-----------------------FYRGMTMQVAVPRDELGRSNYGMIA 1811
Query: 176 VDP-QLARADAQALLDAGVKKWGTDESTFNSILQCTPTVFPAPNFNAK------A-DAEA 227
++P ++A + +Q L V++ G V N+N + A D A
Sbjct: 1812 INPGRVAASFSQEALQYVVERVGKRTGWL---------VEIV-NYNVENQQYVAAGDLRA 1861
Query: 228 LRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEELAGH 281
L +++ + + I + +L+++ EE+ GH
Sbjct: 1862 LDTVTN--------VLNFIKLQKI----------DII--ELQKSLS-LEEVEGH 1894
Score = 47.7 bits (113), Expect = 7e-06
Identities = 55/348 (15%), Positives = 103/348 (29%), Gaps = 100/348 (28%)
Query: 155 SGHFKRLLVSLSQANRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILQCTPTVF 214
+ R L LS + + + V A L + FN IL
Sbjct: 2 DAYSTRPLT-LSHGSLEHVLLVPTASFFI-ASQLQE-----------QFNKIL------- 41
Query: 215 PAPNFNAKADAEALRAAMKGLGTDEKAIIDILAK-----RSIVQRMEITDAFKTLYGKLR 269
P P AD E +++ K S+V+ ++ F + L
Sbjct: 42 PEPTEGFAADDE------------PTTPAELVGKFLGYVSSLVEPSKVG-QFDQV---LN 85
Query: 270 RTFKEYEE--LAGHDIEDAIKGEMSGGVKDGFLSIGFDSRAKELKSRDE-------SVEV 320
E+E L G+DI + ++ +K+++ +
Sbjct: 86 LCLTEFENCYLEGNDIHALA------------AKLLQENDTTLVKTKELIKNYITARIMA 133
Query: 321 DPQLARADAQALLDA---GVKKW-------GTDESTFNSILVTRSYQQLRRTFKEYEELA 370
+ AL A G + G + F ++LR ++ Y L
Sbjct: 134 KRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYF---------EELRDLYQTYHVL- 183
Query: 371 GHDIEDAIKGEMSGGVKDGFLSIVQCVKDKSSYLARRLKDAMAGIGTDDKT-----LIRI 425
+ D I + S +++ D + L + + + T L+ I
Sbjct: 184 ---VGDLI--KFSAET---LSELIRTTLDAEKVFTQGL-NILEWLENPSNTPDKDYLLSI 234
Query: 426 IVTRSEIDLGDIKQ--NFLKLYGKTLEEYIKDDC--SGDYKRLLLALV 469
++ I + + KL G T E +G + L+ A+
Sbjct: 235 PISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVA 282
Score = 44.7 bits (105), Expect = 7e-05
Identities = 31/149 (20%), Positives = 49/149 (32%), Gaps = 46/149 (30%)
Query: 20 RREK-EDKIEESQ-PFRERTLSVQDRILPGRESNPQPSFYKAHALPT--------KLTWA 69
R+ K +++S+ PF ER L +R LP ++P S A +++
Sbjct: 394 RKAKAPSGLDQSRIPFSERKLKFSNRFLP--VASPFHSHLLVPASDLINKDLVKNNVSFN 451
Query: 70 GPMDL------------IRELKSELSGNFEDAVVALMTPLP-D----LYAKELH------ 106
D+ +R L +S +V + LP K H
Sbjct: 452 AK-DIQIPVYDTFDGSDLRVLSGSISER----IVDCIIRLPVKWETTTQFKATHILDFGP 506
Query: 107 KAISGLGTDEKALVEILTTLSNFGIRTIT 135
SGLG L + G+R I
Sbjct: 507 GGASGLGV----LTHRNKDGT--GVRVIV 529
Score = 40.0 bits (93), Expect = 0.002
Identities = 45/295 (15%), Positives = 84/295 (28%), Gaps = 116/295 (39%)
Query: 138 YETAYKASLEKDI--KGDTSGHFKRLL-VSLSQANRDESVEVDPQLARADAQALLDAGVK 194
Y+T+ A +D+ + D HFK S+ + V + + + +
Sbjct: 1636 YKTSKAA---QDVWNRAD--NHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRE---- 1686
Query: 195 KWGTDESTFNSIL---QCTPTVFPAPNFNA-----KADAEALRA------AMKGLGTDEK 240
F +I+ T +F N ++ +++ L A A+ EK
Sbjct: 1687 --NYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALT---LMEK 1741
Query: 241 AIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEELAGH---------------DIED 285
A + L + ++ DA AGH IE
Sbjct: 1742 AAFEDLKSKGLIP----ADAT----------------FAGHSLGEYAALASLADVMSIES 1781
Query: 286 AIK-----GEMSGGVKDGFLSIGFDSRAKELKSRDES-------VEVDP-QLARADAQAL 332
++ G + RDE + ++P ++A + +Q
Sbjct: 1782 LVEVVFYRGMT----------------MQVAVPRDELGRSNYGMIAINPGRVAASFSQEA 1825
Query: 333 LDAGVKKWGTDEST------FNSILVTRSYQQLRRTFKEYEELAGH--DIEDAIK 379
L V++ G +N QQ Y AG ++
Sbjct: 1826 LQYVVERVGKRTGWLVEIVNYNV-----ENQQ-------Y-VAAGDLRALDTVTN 1867
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 34.9 bits (80), Expect = 0.068
Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 17/130 (13%)
Query: 185 AQALLDAGVKKWGTDESTFNSILQCTPTVFP----APNF-----------NAKADAEALR 229
A+ + GV+ + E FN + TP V +P K LR
Sbjct: 686 AEGIEKMGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKLR 745
Query: 230 AAMKGLGTDEKAI-IDILAKRSIVQRMEITDAFKTLYGKLRRTFK-EYEELAGHDIEDAI 287
+ KA+ I+ + +V A+ + + R + ++ EL + I
Sbjct: 746 KELVETSEVRKAVSIETALEHKVVNGNSADAAYAQVEIQPRANIQLDFPELKPYKQVKQI 805
Query: 288 KGEMSGGVKD 297
G+ D
Sbjct: 806 APAELEGLLD 815
Score = 29.5 bits (66), Expect = 3.3
Identities = 9/71 (12%), Positives = 20/71 (28%), Gaps = 17/71 (23%)
Query: 287 IKGEMSGGVKDGF--LSIGFDSRAKELKSRDESVEVDP--QLARADA-QALLDAGVKKWG 341
+ G+ + G+ + G + VDP +A + +G+
Sbjct: 986 VAGQ----IPTGWNAKTYGIS--DDIISQ------VDPITLFVLVSVVEAFIASGITDPY 1033
Query: 342 TDESTFNSILV 352
+ V
Sbjct: 1034 EMYKYVHVSEV 1044
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.9 bits (66), Expect = 1.1
Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 24/52 (46%)
Query: 184 DAQAL--LDAGVKKWGTDESTFNSILQCTPTVFPAPNFNAKADAEALRAAMK 233
+ QAL L A +K + D AP A A++A M+
Sbjct: 18 EKQALKKLQASLKLYADDS---------------AP-------ALAIKATME 47
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 29.7 bits (66), Expect = 1.4
Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 23/78 (29%)
Query: 307 RAKELKSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVTRSYQ-QLRRTFK- 364
+ K L+ D + +V Q R A+ L+ +W + Q+ +
Sbjct: 94 QRKRLQELDAASKVMEQEWREKAKKDLE----EW------------NQRQSEQVEKNKIN 137
Query: 365 ----EYEELAGHDIEDAI 378
+ D D I
Sbjct: 138 NRIADKAFYQQPD-ADII 154
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase;
L-2-hydroxycarboxylate dehydrogenase, L-lactate
dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD;
2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Length = 309
Score = 29.8 bits (68), Expect = 1.8
Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 227 ALRAAMKGLGTDEKAIIDILAKRSIVQRMEITDAFKTLYGKLRRTFKEYEELAGHDI 283
A +G+ D+ ID + +++ DA L ++ LA D+
Sbjct: 17 AHGLIAQGVA-DDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADV 72
>3clm_A Transaldolase; YP_208650.1, structural genomics, joint cente
structural genomics, JCSG, protein structure initiative,
PS transferase; HET: MSE; 1.14A {Neisseria gonorrhoeae}
Length = 352
Score = 29.0 bits (65), Expect = 3.5
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 23/71 (32%)
Query: 275 YEELAGHDIEDAIK-----GEMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADA 329
YE +A D+ A E +GG GF+S+ EV P+LA+ DA
Sbjct: 76 YETMAVADVRAACDVCLAEHESTGGK-TGFVSL----------------EVSPELAK-DA 117
Query: 330 QALLDAGVKKW 340
Q ++ +
Sbjct: 118 QGTVEEARRLH 128
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus
thermophilus}
Length = 317
Score = 28.2 bits (63), Expect = 6.2
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 311 LKSRDESVEVDPQLARADAQALLDAGVKKWGTDESTFNSILVT 353
L+ E VD L A+ L+ + + G +IL+T
Sbjct: 27 LQGAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLT 69
>3r5e_A Transaldolase; pentose phosphate pathway, TIM barrel fold,
transferase; 2.10A {Corynebacterium glutamicum}
Length = 360
Score = 27.9 bits (62), Expect = 8.4
Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 23/71 (32%)
Query: 275 YEELAGHDIEDAIKG-----EMSGGVKDGFLSIGFDSRAKELKSRDESVEVDPQLARADA 329
++ D+ +A E S G DG +SI EVDP+++ D
Sbjct: 76 VYAMSIDDVRNACDLFTGIFESSNGY-DGRVSI----------------EVDPRISA-DR 117
Query: 330 QALLDAGVKKW 340
A L + W
Sbjct: 118 DATLAQAKELW 128
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.315 0.133 0.368
Gapped
Lambda K H
0.267 0.0639 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,282,312
Number of extensions: 468729
Number of successful extensions: 1714
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1482
Number of HSP's successfully gapped: 118
Length of query: 470
Length of database: 6,701,793
Length adjustment: 97
Effective length of query: 373
Effective length of database: 3,993,456
Effective search space: 1489559088
Effective search space used: 1489559088
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (26.7 bits)