Query psy18132
Match_columns 64
No_of_seqs 126 out of 1016
Neff 7.8
Searched_HMMs 46136
Date Fri Aug 16 23:28:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18132.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18132hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0819|consensus 99.9 2.6E-23 5.6E-28 135.2 4.4 63 2-64 81-143 (321)
2 KOG0819|consensus 99.9 3.5E-23 7.6E-28 134.6 1.5 64 1-64 239-302 (321)
3 PF00191 Annexin: Annexin; In 99.8 1.6E-19 3.4E-24 94.1 6.9 52 13-64 1-52 (66)
4 smart00335 ANX Annexin repeats 99.5 6.5E-14 1.4E-18 70.2 5.2 39 26-64 1-39 (53)
5 PF14003 YlbE: YlbE-like prote 79.9 3.7 7.9E-05 21.5 3.1 27 37-63 18-44 (65)
6 cd00171 Sec7 Sec7 domain; Doma 77.3 14 0.0003 22.6 6.0 52 9-64 32-86 (185)
7 PF13043 DUF3903: Domain of un 76.6 3.1 6.8E-05 19.4 2.0 18 43-60 9-26 (40)
8 PF02097 Filo_VP35: Filovirida 72.7 4.6 9.9E-05 26.9 2.7 44 11-54 202-247 (321)
9 PF12098 DUF3574: Protein of u 71.5 4.6 0.0001 22.9 2.3 19 40-58 73-91 (104)
10 PF13720 Acetyltransf_11: Udp 70.2 5.6 0.00012 21.4 2.3 20 39-58 28-47 (83)
11 PF08748 DUF1789: Domain of un 69.7 20 0.00043 21.0 4.8 45 11-55 74-121 (128)
12 PF13062 DUF3924: Protein of u 67.8 6.9 0.00015 19.8 2.2 20 42-61 14-33 (62)
13 PF00249 Myb_DNA-binding: Myb- 56.2 21 0.00045 16.7 3.4 32 14-45 8-41 (48)
14 PRK12461 UDP-N-acetylglucosami 55.7 17 0.00038 23.3 3.0 31 26-58 189-219 (255)
15 PF10012 DUF2255: Uncharacteri 49.0 25 0.00053 20.4 2.6 18 40-57 79-96 (116)
16 COG3184 Uncharacterized protei 46.3 38 0.00081 21.2 3.3 24 38-61 107-130 (183)
17 PF13373 DUF2407_C: DUF2407 C- 45.2 28 0.00062 20.6 2.6 19 38-56 10-28 (140)
18 PF12652 CotJB: CotJB protein; 44.7 28 0.00061 18.6 2.3 40 15-56 15-54 (78)
19 COG5118 BDP1 Transcription ini 43.8 29 0.00063 24.4 2.7 32 14-45 372-403 (507)
20 COG1043 LpxA Acyl-[acyl carrie 40.1 28 0.00062 22.8 2.2 23 40-62 206-230 (260)
21 PF03705 CheR_N: CheR methyltr 40.1 45 0.00098 15.8 2.6 22 40-61 1-22 (57)
22 KOG2027|consensus 39.9 29 0.00063 24.0 2.3 21 42-62 98-118 (388)
23 TIGR03164 UHCUDC OHCU decarbox 39.6 31 0.00066 20.7 2.1 18 42-59 94-111 (157)
24 PF09349 OHCU_decarbox: OHCU d 39.4 39 0.00085 20.1 2.6 19 42-60 97-115 (159)
25 COG3324 Predicted enzyme relat 39.1 19 0.00041 21.1 1.2 21 42-62 18-38 (127)
26 COG1753 Predicted antotoxin, c 39.0 64 0.0014 17.2 4.3 43 13-55 25-67 (74)
27 cd06395 PB1_Map2k5 PB1 domain 38.4 30 0.00064 19.1 1.8 20 36-55 54-73 (91)
28 PF02964 MeMO_Hyd_G: Methane m 36.6 30 0.00066 21.1 1.8 44 13-58 68-116 (161)
29 PF09832 DUF2059: Uncharacteri 36.2 21 0.00045 17.7 0.9 23 39-61 17-39 (64)
30 smart00717 SANT SANT SWI3, AD 36.2 44 0.00096 14.6 3.3 33 14-46 8-41 (49)
31 PF11081 DUF2890: Protein of u 35.8 1.1E+02 0.0023 19.3 4.1 29 29-57 154-182 (187)
32 PRK08487 DNA polymerase III su 34.6 1.2E+02 0.0026 19.9 4.5 50 3-53 129-180 (328)
33 TIGR03180 UraD_2 OHCU decarbox 34.5 41 0.00089 20.2 2.1 18 42-59 94-111 (158)
34 COG3007 Uncharacterized paraqu 34.3 53 0.0011 22.6 2.8 25 11-35 284-308 (398)
35 PF08587 UBA_2: Ubiquitin asso 33.8 6.2 0.00013 19.3 -1.2 28 25-52 13-41 (46)
36 PRK13798 putative OHCU decarbo 33.5 43 0.00093 20.3 2.1 18 42-59 99-116 (166)
37 cd00167 SANT 'SWI3, ADA2, N-Co 33.1 49 0.0011 14.2 3.2 31 15-45 7-38 (45)
38 PF06854 Phage_Gp15: Bacteriop 32.9 67 0.0014 19.8 2.9 22 41-62 108-129 (183)
39 PF05890 Ebp2: Eukaryotic rRNA 31.3 41 0.0009 22.0 1.9 12 39-50 115-126 (271)
40 PRK15058 cytochrome b562; Prov 30.8 52 0.0011 19.4 2.1 16 41-56 113-128 (128)
41 PF11629 Mst1_SARAH: C termina 29.6 80 0.0017 15.6 2.4 15 41-55 25-39 (49)
42 PF12241 Enoyl_reductase: Tran 29.4 76 0.0017 20.6 2.8 25 10-34 203-227 (237)
43 smart00222 Sec7 Sec7 domain. D 28.7 1.4E+02 0.0031 18.1 5.7 51 9-63 33-86 (187)
44 PRK05289 UDP-N-acetylglucosami 28.6 79 0.0017 20.2 2.9 19 39-57 204-222 (262)
45 PF13348 Y_phosphatase3C: Tyro 28.5 86 0.0019 15.5 2.8 26 25-51 42-67 (68)
46 PRK07914 hypothetical protein; 28.5 1.6E+02 0.0036 19.1 4.4 52 3-55 121-175 (320)
47 PF05247 FlhD: Flagellar trans 27.6 67 0.0015 18.2 2.1 29 20-49 31-59 (104)
48 PF03461 TRCF: TRCF domain; I 27.3 1.2E+02 0.0025 16.6 3.4 28 34-61 25-52 (101)
49 cd01763 Sumo Small ubiquitin-r 27.0 69 0.0015 16.9 2.1 22 39-60 29-50 (87)
50 COG1219 ClpX ATP-dependent pro 26.8 85 0.0018 21.9 2.8 28 27-58 301-328 (408)
51 COG3742 Uncharacterized protei 26.6 1.2E+02 0.0026 17.9 3.1 54 2-57 7-66 (131)
52 PF13758 Prefoldin_3: Prefoldi 26.5 1.3E+02 0.0028 17.0 4.4 40 9-48 29-73 (99)
53 PF02978 SRP_SPB: Signal pepti 25.9 1.2E+02 0.0026 16.9 3.0 27 9-35 67-93 (104)
54 cd06150 YjgF_YER057c_UK114_lik 25.9 38 0.00082 18.4 0.9 41 17-57 37-78 (105)
55 PRK02909 transcriptional activ 25.5 1.3E+02 0.0028 17.2 3.0 29 20-49 31-59 (105)
56 TIGR03610 RutC pyrimidine util 25.4 36 0.00077 19.4 0.8 41 17-57 58-99 (127)
57 PF12631 GTPase_Cys_C: Catalyt 25.1 1.1E+02 0.0024 15.6 3.6 28 9-36 36-69 (73)
58 KOG0859|consensus 24.8 88 0.0019 20.0 2.5 22 41-62 77-98 (217)
59 COG1460 Uncharacterized protei 24.8 1.5E+02 0.0033 17.1 4.3 39 15-53 53-94 (114)
60 PF00165 HTH_AraC: Bacterial r 24.8 73 0.0016 14.2 1.7 20 44-63 22-41 (42)
61 PF09183 DUF1947: Domain of un 24.6 75 0.0016 16.6 1.8 22 40-61 6-27 (65)
62 cd02198 YjgH_like YjgH belongs 24.5 37 0.0008 18.6 0.7 43 15-57 39-83 (111)
63 KOG3426|consensus 24.4 1.6E+02 0.0034 17.2 4.6 39 15-54 55-95 (124)
64 PF01369 Sec7: Sec7 domain; I 24.2 1.8E+02 0.0038 17.7 5.0 51 9-63 36-89 (190)
65 KOG0625|consensus 23.7 1.1E+02 0.0024 22.0 3.0 31 30-60 392-422 (558)
66 PF12844 HTH_19: Helix-turn-he 23.5 1E+02 0.0022 14.7 3.5 39 23-62 20-58 (64)
67 cd06153 YjgF_YER057c_UK114_lik 23.4 55 0.0012 18.3 1.3 41 17-57 44-90 (114)
68 COG3236 Uncharacterized protei 22.7 1.9E+02 0.0041 17.7 3.5 34 15-48 47-81 (162)
69 PRK13430 F0F1 ATP synthase sub 22.4 1.1E+02 0.0024 19.9 2.6 40 16-55 153-194 (271)
70 cd06155 eu_AANH_C_1 A group of 22.3 48 0.001 17.9 0.9 41 17-57 34-75 (101)
71 PF04711 ApoA-II: Apolipoprote 22.3 14 0.00031 19.8 -1.2 21 43-63 6-29 (76)
72 PF14117 DUF4287: Domain of un 22.1 1.1E+02 0.0023 15.7 2.1 12 51-62 9-20 (61)
73 PRK11166 chemotaxis regulator 22.0 71 0.0015 20.4 1.7 21 11-31 21-41 (214)
74 PF03709 OKR_DC_1_N: Orn/Lys/A 21.7 1.1E+02 0.0024 16.9 2.3 21 3-23 93-113 (115)
75 PF08361 TetR_C_2: MAATS-type 21.7 1.1E+02 0.0024 17.0 2.3 44 9-52 1-48 (121)
76 PHA00542 putative Cro-like pro 21.6 1.4E+02 0.0031 15.6 4.1 33 23-55 39-75 (82)
77 PF11378 DUF3181: Protein of u 21.6 37 0.00079 18.8 0.3 38 14-51 47-87 (87)
78 PF10319 7TM_GPCR_Srj: Serpent 21.5 1.9E+02 0.0042 19.5 3.7 26 35-60 151-177 (310)
79 PRK09720 cybC cytochrome b562; 21.5 95 0.0021 17.5 2.0 15 41-55 85-99 (100)
80 PF09778 Guanylate_cyc_2: Guan 21.3 40 0.00087 21.5 0.5 18 15-32 192-209 (212)
81 PRK13434 F0F1 ATP synthase sub 21.2 1.1E+02 0.0023 18.5 2.3 38 17-55 58-98 (184)
82 PRK09499 sifB secreted effecto 20.9 2.8E+02 0.006 18.7 4.3 47 10-56 21-73 (316)
83 KOG0930|consensus 20.6 2.9E+02 0.0064 18.9 5.4 40 7-49 89-128 (395)
84 PRK13883 conjugal transfer pro 20.4 80 0.0017 19.1 1.6 23 4-26 55-77 (151)
85 TIGR01545 YfhB_g-proteo haloac 20.3 2.1E+02 0.0047 17.5 3.6 27 30-56 64-90 (210)
86 COG5570 Uncharacterized small 20.2 1.4E+02 0.003 15.0 2.7 23 13-35 16-38 (57)
87 COG0817 RuvC Holliday junction 20.1 75 0.0016 19.5 1.4 31 8-38 94-124 (160)
No 1
>KOG0819|consensus
Probab=99.88 E-value=2.6e-23 Score=135.16 Aligned_cols=63 Identities=43% Similarity=0.659 Sum_probs=61.2
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
++++|+.+|++|||..|++||||.||||++||+|+|||||.||..|+++|+..|++||+++|.
T Consensus 81 ~i~al~~~p~~~DA~~l~~amkg~gtde~vlIEIlcTRT~~el~~i~~aY~~~y~~sLEeDI~ 143 (321)
T KOG0819|consen 81 AIVALMKPPAEYDAKELKKAMKGLGTDEKVLIEILCTRTNEELRAIRQAYQELYKKSLEEDIA 143 (321)
T ss_pred HHHHHcCCHHHhHHHHHHHHHhccCcchhhheeeeccCCHHHHHHHHHHHHHHHcccHHHHhh
Confidence 578999999999999999999999999999999999999999999999999999999999984
No 2
>KOG0819|consensus
Probab=99.86 E-value=3.5e-23 Score=134.57 Aligned_cols=64 Identities=55% Similarity=0.932 Sum_probs=62.1
Q ss_pred CcccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 1 MSRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 1 ~aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+|+|.|+++|+.|||+.||+||||.|||+++||||++|||+.||..|+..|+++||+||.++|+
T Consensus 239 laiv~c~~n~~~yFA~~L~~amkg~GTdd~~LiRI~VsRsEiDl~~Ik~ef~~~Y~ksL~~~I~ 302 (321)
T KOG0819|consen 239 LAIVKCIRNPPAYFAERLRKAMKGLGTDDKTLIRIVVSRSEIDLLDIKEEFQRKYGKSLYSAIK 302 (321)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHhccCCCccceeeeeeeHHHhhHHHHHHHHHHHhCccHHHHHh
Confidence 4789999999999999999999999999999999999999999999999999999999999884
No 3
>PF00191 Annexin: Annexin; InterPro: IPR018502 The annexins (or lipocortins) are a family of proteins that bind to phospholipids in a calcium-dependent manner []. They are distributed ubiquitously in different tissues and cell types of higher and lower eukaryotes, including mammals, fish, birds, Drosophila melanogaster (Fruit fly), Xenopus laevis (African clawed frog), Caenorhabditis elegans , Dictyostelium discoideum (Slime mold) and Neurospora crassa [, ]. Annexins are absent from yeasts and prokaryotes []. The plant annexins are somewhat distinct from those found in other taxa []. Most eukaryotic species have 1-20 annexin (ANX) genes. All annexins share a core domain made up of four similar repeats, each approximately 70 amino acids long []. Each individual annexin repeat (sometimes referred to as endonexin folds) is folded into five alpha-helices, and in turn are wound into a right-handed super-helix; they usually contain a characteristic 'type 2' motif for binding calcium ions with the sequence 'GxGT-[38 residues]-D/E'. Animal and fungal annexins also have variable amino-terminal domains. The core domains of most vertebrate annexins have been analysed by X-ray crystallography, revealing conservation of their secondary and tertiary structures despite only 45-55% amino-acid identity among individual members. The four repeats pack into a structure that resembles a flattened disc, with a slightly convex surface on which the Ca 2+ -binding loops are located and a concave surface at which the amino and carboxyl termini come into close apposition. Annexins are traditionally thought of as calcium-dependent phospholipid-binding proteins, but recent work suggests a more complex set of functions. The famiy has been linked with inhibition of phospholipase activity, exocytosis and endoctyosis, signal transduction, organisation of the extracellular matrix, resistance to reactive oxygen species and DNA replication [].; GO: 0005509 calcium ion binding, 0005544 calcium-dependent phospholipid binding; PDB: 1N44_A 1BC1_A 2IE6_A 2H0M_A 1A8B_A 2H0K_A 1BCW_A 1BCZ_A 1N42_A 1BC0_A ....
Probab=99.81 E-value=1.6e-19 Score=94.06 Aligned_cols=52 Identities=52% Similarity=0.700 Sum_probs=49.3
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 13 YLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 13 ~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+||+.|++|++|+|+|+..+++|+++||+.|+..|+++|++.||++|+++|+
T Consensus 1 ~DA~~l~~a~~~~g~de~~li~Il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~ 52 (66)
T PF00191_consen 1 YDAELLHAALKGWGTDEDVLIEILCTRSPAQLRAIKQAYKKKYGKDLEEDIK 52 (66)
T ss_dssp HHHHHHHHHHSSSSSTHHHHHHHHHHSTHHHHHHHHHHHHHHHSS-HHHHHH
T ss_pred CHHHHHHHHccCCCCChhHhhhHHhhhcccccceeehhhhhhhHHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999874
No 4
>smart00335 ANX Annexin repeats.
Probab=99.50 E-value=6.5e-14 Score=70.15 Aligned_cols=39 Identities=56% Similarity=0.816 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 26 GTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 26 gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
||||..|++|+++||+.|+.+|+++|++.||++|+++|+
T Consensus 1 gtde~~l~~il~~rs~~~~~~i~~~Y~~~~~~~L~~~i~ 39 (53)
T smart00335 1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIK 39 (53)
T ss_pred CCCHHHHHHHHHcCCHHHHHHHHHHHHHHhCccHHHHHH
Confidence 799999999999999999999999999999999999874
No 5
>PF14003 YlbE: YlbE-like protein
Probab=79.91 E-value=3.7 Score=21.51 Aligned_cols=27 Identities=19% Similarity=0.378 Sum_probs=23.7
Q ss_pred HhCCHHHHHHHHHHHHHHhCCCHHHhh
Q psy18132 37 VTRSEIDLGDIKQNFLKLYGKTLEEYI 63 (64)
Q Consensus 37 ~~rs~~~l~~i~~~Y~~~~g~~L~~~I 63 (64)
.+|.|.++...-.++...|+++.-+.|
T Consensus 18 LsR~P~~l~~fe~~a~~~y~kT~p~rV 44 (65)
T PF14003_consen 18 LSRNPEELEAFEKEAKHFYKKTIPHRV 44 (65)
T ss_pred HccCHHHHHHHHHHHHHHHhccccHHH
Confidence 469999999999999999999886654
No 6
>cd00171 Sec7 Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor activity.
Probab=77.31 E-value=14 Score=22.58 Aligned_cols=52 Identities=19% Similarity=0.295 Sum_probs=39.5
Q ss_pred CchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHh---CCCHHHhhC
Q psy18132 9 DKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLY---GKTLEEYIK 64 (64)
Q Consensus 9 ~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~---g~~L~~~I~ 64 (64)
+-+.-.|..|+.. .|.|...+-+.|.... +.-..+..+|-+.+ |.++.++++
T Consensus 32 ~~~~~iA~fl~~~---~~l~k~~ig~~L~~~~-~~~~~vL~~y~~~f~f~~~~i~~ALR 86 (185)
T cd00171 32 DSPKEIAKFLYET---EGLNKKAIGEYLGENN-EFNSLVLHEFVDLFDFSGLRLDEALR 86 (185)
T ss_pred CCHHHHHHHHHhC---CCCCHHHHHHHHcCCc-hHHHHHHHHHHHhcCCCCCCHHHHHH
Confidence 4455667777775 6899999999999776 45588888898886 777777653
No 7
>PF13043 DUF3903: Domain of unknown function (DUF3903)
Probab=76.55 E-value=3.1 Score=19.45 Aligned_cols=18 Identities=22% Similarity=0.458 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHhCCCHH
Q psy18132 43 DLGDIKQNFLKLYGKTLE 60 (64)
Q Consensus 43 ~l~~i~~~Y~~~~g~~L~ 60 (64)
.++++++.-+++||++|-
T Consensus 9 ai~kvr~eckrrfgktll 26 (40)
T PF13043_consen 9 AIQKVRAECKRRFGKTLL 26 (40)
T ss_pred HHHHHHHHHHHHhchhhh
Confidence 467889999999999974
No 8
>PF02097 Filo_VP35: Filoviridae VP35; InterPro: IPR002953 The filoviridae are a group of viruses that cause haemorrhagic fevers with a high mortality rate. The family currently contains three viruses: Ebola virus sp., Lake Victoria marburgvirus and Reston ebolavirus, named after their corresponding outbreak regions. They possess negative-stranded RNA genomes, which encode at least 7 proteins. The VP35 protein is found in the genomes of all filoviruses. Its function is presently unknown, but it is thought to share the function of the phosphorylated proteins (polymerase subunits) of rhabdoviruses and paramyxoviruses due to its position in the genome. There is no evidence however, to suggest that VP35 is phosphorylated [].; PDB: 3KS8_D 3L2A_A 3KS4_A 3L28_E 3L25_D 3FKE_B 3L26_A 3L27_D 3L29_B.
Probab=72.73 E-value=4.6 Score=26.93 Aligned_cols=44 Identities=30% Similarity=0.428 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHhhCCCCCHHHHHHHHH--hCCHHHHHHHHHHHHHH
Q psy18132 11 SSYLARRLKDAMAGIGTDDKTLIRIIV--TRSEIDLGDIKQNFLKL 54 (64)
Q Consensus 11 ~~~~a~~l~~a~kg~gtde~~Li~il~--~rs~~~l~~i~~~Y~~~ 54 (64)
+.-+.+.++.-+-|.||....|+.++| +|++..|+-+...|++.
T Consensus 202 akdl~~il~~HLpG~~TAFHqLvqvI~kvgkD~~~Ldv~haeFq~~ 247 (321)
T PF02097_consen 202 AKDLKRILYDHLPGFGTAFHQLVQVICKVGKDNHDLDVIHAEFQAS 247 (321)
T ss_dssp HHHHHHHHHHCSSSSSBHHHHHHHHHHHHHHHTT-HHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCchHHHHHHHHHHHcccchHHHHHHHHHHHH
Confidence 344577788888999999999999987 68889999999999874
No 9
>PF12098 DUF3574: Protein of unknown function (DUF3574); InterPro: IPR021957 This family of proteins is functionally uncharacterised. This protein is found in bacteria and viruses. Proteins in this family are typically between 144 to 163 amino acids in length. This protein has a conserved TPRF sequence motif.
Probab=71.46 E-value=4.6 Score=22.90 Aligned_cols=19 Identities=11% Similarity=0.373 Sum_probs=15.8
Q ss_pred CHHHHHHHHHHHHHHhCCC
Q psy18132 40 SEIDLGDIKQNFLKLYGKT 58 (64)
Q Consensus 40 s~~~l~~i~~~Y~~~~g~~ 58 (64)
++..+.+|+++|++.|+..
T Consensus 73 ~~~~i~~Ir~~Yk~rF~Qe 91 (104)
T PF12098_consen 73 AEARIEAIREAYKQRFQQE 91 (104)
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 3577999999999999763
No 10
>PF13720 Acetyltransf_11: Udp N-acetylglucosamine O-acyltransferase; Domain 2; PDB: 3I3A_A 3I3X_A 3HSQ_B 2JF2_A 1LXA_A 2AQ9_A 2QIV_X 2QIA_A 2JF3_A 4EQY_F ....
Probab=70.25 E-value=5.6 Score=21.38 Aligned_cols=20 Identities=10% Similarity=0.297 Sum_probs=16.1
Q ss_pred CCHHHHHHHHHHHHHHhCCC
Q psy18132 39 RSEIDLGDIKQNFLKLYGKT 58 (64)
Q Consensus 39 rs~~~l~~i~~~Y~~~~g~~ 58 (64)
=+..++..|+++|+..|...
T Consensus 28 fs~~~i~~l~~ayr~l~~~~ 47 (83)
T PF13720_consen 28 FSKEEISALRRAYRILFRSG 47 (83)
T ss_dssp S-HHHHHHHHHHHHHHHTSS
T ss_pred CCHHHHHHHHHHHHHHHhCC
Confidence 36789999999999999543
No 11
>PF08748 DUF1789: Domain of unknown function (DUF1789); InterPro: IPR014859 This entry represents a putative uncharacterised protein found in phage-related conserved hypothetical protein from Bordetella.
Probab=69.75 E-value=20 Score=20.99 Aligned_cols=45 Identities=13% Similarity=0.163 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHhhCCCCCH---HHHHHHHHhCCHHHHHHHHHHHHHHh
Q psy18132 11 SSYLARRLKDAMAGIGTDD---KTLIRIIVTRSEIDLGDIKQNFLKLY 55 (64)
Q Consensus 11 ~~~~a~~l~~a~kg~gtde---~~Li~il~~rs~~~l~~i~~~Y~~~~ 55 (64)
...+++.+.+-+.||+.|+ ..-+..|+...+.-..+|.++|.+.+
T Consensus 74 ~~~~ad~i~~iv~gW~ld~~fn~Enl~~L~~~yp~a~~AI~~aY~~~l 121 (128)
T PF08748_consen 74 VDLNADFILEIVAGWDLDEEFNDENLELLVDNYPGAAEAIVDAYYQAL 121 (128)
T ss_pred hhhhHHHHHHHHhccCCCCccCHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence 4558999999999999665 23346677788888999999998754
No 12
>PF13062 DUF3924: Protein of unknown function (DUF3924)
Probab=67.78 E-value=6.9 Score=19.75 Aligned_cols=20 Identities=35% Similarity=0.406 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHhCCCHHH
Q psy18132 42 IDLGDIKQNFLKLYGKTLEE 61 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~L~~ 61 (64)
.-+..++++|+++.|.++.+
T Consensus 14 ekl~llkqayqkktgatise 33 (62)
T PF13062_consen 14 EKLDLLKQAYQKKTGATISE 33 (62)
T ss_pred HHHHHHHHHHHhhcCCccch
Confidence 45788999999999988765
No 13
>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=56.23 E-value=21 Score=16.65 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=23.2
Q ss_pred HHHHHHHHhhCCCCC-HHHHHHHHH-hCCHHHHH
Q psy18132 14 LARRLKDAMAGIGTD-DKTLIRIIV-TRSEIDLG 45 (64)
Q Consensus 14 ~a~~l~~a~kg~gtd-e~~Li~il~-~rs~~~l~ 45 (64)
.-..|.++++..|.+ =..+.+.+. +||..++.
T Consensus 8 E~~~l~~~v~~~g~~~W~~Ia~~~~~~Rt~~qc~ 41 (48)
T PF00249_consen 8 EDEKLLEAVKKYGKDNWKKIAKRMPGGRTAKQCR 41 (48)
T ss_dssp HHHHHHHHHHHSTTTHHHHHHHHHSSSSTHHHHH
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHcCCCCCHHHHH
Confidence 456788999999998 455555566 69987764
No 14
>PRK12461 UDP-N-acetylglucosamine acyltransferase; Provisional
Probab=55.70 E-value=17 Score=23.28 Aligned_cols=31 Identities=19% Similarity=0.242 Sum_probs=21.2
Q ss_pred CCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCC
Q psy18132 26 GTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKT 58 (64)
Q Consensus 26 gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~ 58 (64)
|.|.-.|.| -+-++.++..|+++|+..|...
T Consensus 189 ~~n~vgl~r--~g~~~~~~~~~~~~~~~~~~~~ 219 (255)
T PRK12461 189 GLNAVGLRR--RGFSSRAIRALKRAYKIIYRSG 219 (255)
T ss_pred ccchhhhhh--cCCCHHHHHHHHHHHHHHHhcC
Confidence 344444433 2347899999999999998664
No 15
>PF10012 DUF2255: Uncharacterized protein conserved in bacteria (DUF2255); InterPro: IPR016888 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=49.04 E-value=25 Score=20.36 Aligned_cols=18 Identities=17% Similarity=0.182 Sum_probs=16.2
Q ss_pred CHHHHHHHHHHHHHHhCC
Q psy18132 40 SEIDLGDIKQNFLKLYGK 57 (64)
Q Consensus 40 s~~~l~~i~~~Y~~~~g~ 57 (64)
++.....|-++|..+|+.
T Consensus 79 d~~~~~~iD~AYr~KY~~ 96 (116)
T PF10012_consen 79 DPALNDAIDAAYRAKYGG 96 (116)
T ss_pred CHHHHHHHHHHHHHhcCC
Confidence 677788999999999998
No 16
>COG3184 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.29 E-value=38 Score=21.18 Aligned_cols=24 Identities=25% Similarity=0.228 Sum_probs=20.9
Q ss_pred hCCHHHHHHHHHHHHHHhCCCHHH
Q psy18132 38 TRSEIDLGDIKQNFLKLYGKTLEE 61 (64)
Q Consensus 38 ~rs~~~l~~i~~~Y~~~~g~~L~~ 61 (64)
.=|+.|++.|...|.+--|++|.+
T Consensus 107 ~FT~eEl~ai~aFY~SpaGkklL~ 130 (183)
T COG3184 107 IFTEEELNAITAFYGSPAGKKLLD 130 (183)
T ss_pred hcCHHHHHHHHHHHcCchhHHHHh
Confidence 357899999999999999999865
No 17
>PF13373 DUF2407_C: DUF2407 C-terminal domain
Probab=45.21 E-value=28 Score=20.59 Aligned_cols=19 Identities=26% Similarity=0.574 Sum_probs=17.4
Q ss_pred hCCHHHHHHHHHHHHHHhC
Q psy18132 38 TRSEIDLGDIKQNFLKLYG 56 (64)
Q Consensus 38 ~rs~~~l~~i~~~Y~~~~g 56 (64)
+=|+.|+..++..|.+.|+
T Consensus 10 GFS~~eI~~LR~QF~~~~~ 28 (140)
T PF13373_consen 10 GFSPEEIQDLRSQFHSIYG 28 (140)
T ss_pred CCCHHHHHHHHHHHHHHhc
Confidence 3589999999999999998
No 18
>PF12652 CotJB: CotJB protein; InterPro: IPR024207 The cotJ operon proteins affect spore coat composition, and is controlled by sigma E. The genes, which include CotJB, are either required for the normal formation of the inner layers of the coat or are themselves structural components of the coat []. CotJB has been identified as a spore coat protein [].
Probab=44.73 E-value=28 Score=18.64 Aligned_cols=40 Identities=18% Similarity=0.184 Sum_probs=24.3
Q ss_pred HHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Q psy18132 15 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYG 56 (64)
Q Consensus 15 a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g 56 (64)
+..|.--+..--.|..+|-.- ......+.++++.|++.||
T Consensus 15 ~~dl~LyLDTHP~d~~Al~~y--~~~~~~~~~l~~~Ye~~yG 54 (78)
T PF12652_consen 15 VVDLNLYLDTHPDDQEALEYY--NEYSKQRKQLKKEYEKRYG 54 (78)
T ss_pred HHHHHHHhcCCCCcHHHHHHH--HHHHHHHHHHHHHHHHHhC
Confidence 334444444444556665432 2234678899999999998
No 19
>COG5118 BDP1 Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription]
Probab=43.77 E-value=29 Score=24.40 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=26.0
Q ss_pred HHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHH
Q psy18132 14 LARRLKDAMAGIGTDDKTLIRIIVTRSEIDLG 45 (64)
Q Consensus 14 ~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~ 45 (64)
+-..+++|+.-||||-..+...+-+|+..|+.
T Consensus 372 e~ekFYKALs~wGtdF~LIs~lfP~R~RkqIK 403 (507)
T COG5118 372 EIEKFYKALSIWGTDFSLISSLFPNRERKQIK 403 (507)
T ss_pred HHHHHHHHHHHhcchHHHHHHhcCchhHHHHH
Confidence 45677899999999999988888887766543
No 20
>COG1043 LpxA Acyl-[acyl carrier protein]
Probab=40.12 E-value=28 Score=22.84 Aligned_cols=23 Identities=22% Similarity=0.404 Sum_probs=17.5
Q ss_pred CHHHHHHHHHHHHHHhCC--CHHHh
Q psy18132 40 SEIDLGDIKQNFLKLYGK--TLEEY 62 (64)
Q Consensus 40 s~~~l~~i~~~Y~~~~g~--~L~~~ 62 (64)
+.+++.+|+++|+..|.. ++.+.
T Consensus 206 ~~e~i~alr~ayk~lfr~~~~~~e~ 230 (260)
T COG1043 206 SREEIHALRKAYKLLFRSGLTLREA 230 (260)
T ss_pred CHHHHHHHHHHHHHHeeCCCCHHHH
Confidence 568899999999999854 44443
No 21
>PF03705 CheR_N: CheR methyltransferase, all-alpha domain; InterPro: IPR022641 CheR proteins are part of the chemotaxis signaling mechanism which methylates the chemotaxis receptor at specific glutamate residues. This entry refers to the N-terminal domain of the CherR-type MCP methyltransferases, which are found in bacteria, archaea and green plants. This entry is found in association with PF01739 from PFAM. Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Flagellated bacteria swim towards favourable chemicals and away from deleterious ones. Sensing of chemoeffector gradients involves chemotaxis receptors, transmembrane (TM) proteins that detect stimuli through their periplasmic domains and transduce the signals via their cytoplasmic domains []. Signalling outputs from these receptors are influenced both by the binding of the chemoeffector ligand to their periplasmic domains and by methylation of specific glutamate residues on their cytoplasmic domains. Methylation is catalysed by CheR, an S-adenosylmethionine-dependent methyltransferase [], which reversibly methylates specific glutamate residues within a coiled coil region, to form gamma-glutamyl methyl ester residues [, ]. The structure of the Salmonella typhimurium chemotaxis receptor methyltransferase CheR, bound to S-adenosylhomocysteine, has been determined to a resolution of 2.0 A []. The structure reveals CheR to be a two-domain protein, with a smaller N-terminal helical domain linked via a single polypeptide connection to a larger C-terminal alpha/beta domain. The C-terminal domain has the characteristics of a nucleotide-binding fold, with an insertion of a small anti-parallel beta-sheet subdomain. The S-adenosylhomocysteine-binding site is formed mainly by the large domain, with contributions from residues within the N-terminal domain and the linker region [].; PDB: 1AF7_A 1BC5_A.
Probab=40.10 E-value=45 Score=15.84 Aligned_cols=22 Identities=18% Similarity=0.335 Sum_probs=11.5
Q ss_pred CHHHHHHHHHHHHHHhCCCHHH
Q psy18132 40 SEIDLGDIKQNFLKLYGKTLEE 61 (64)
Q Consensus 40 s~~~l~~i~~~Y~~~~g~~L~~ 61 (64)
|+.++..+.+.-.+.+|.+|..
T Consensus 1 sd~~f~~~~~~i~~~~Gi~l~~ 22 (57)
T PF03705_consen 1 SDAEFERFRELIYRRTGIDLSE 22 (57)
T ss_dssp -HHHHHHHHHHHHHHH-----G
T ss_pred CHHHHHHHHHHHHHHHCCCCch
Confidence 4567777777777777777653
No 22
>KOG2027|consensus
Probab=39.94 E-value=29 Score=24.00 Aligned_cols=21 Identities=33% Similarity=0.586 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHhCCCHHHh
Q psy18132 42 IDLGDIKQNFLKLYGKTLEEY 62 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~L~~~ 62 (64)
.+|..|++.|-++||+++...
T Consensus 98 pEL~~i~~~f~~kYGk~f~~~ 118 (388)
T KOG2027|consen 98 PELREIRDLFVKKYGKEFVKA 118 (388)
T ss_pred HHHHHHHHHHHHHHhHHHHHH
Confidence 899999999999999998764
No 23
>TIGR03164 UHCUDC OHCU decarboxylase. Previously thought to only proceed spontaneously, the decarboxylation of 2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) has been recently been shown to be catalyzed by this enzyme in Mus musculus. Homologs of this enzyme are found adjacent to and fused with uricase in a number of prokaryotes and are represented by this model.
Probab=39.59 E-value=31 Score=20.69 Aligned_cols=18 Identities=6% Similarity=0.266 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHhCCCH
Q psy18132 42 IDLGDIKQNFLKLYGKTL 59 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~L 59 (64)
..+..++++|+++||-..
T Consensus 94 ~~L~~lN~~Y~~kFGfpF 111 (157)
T TIGR03164 94 ARFTRLNNAYRARFGFPF 111 (157)
T ss_pred HHHHHHHHHHHHHCCCee
Confidence 467888999999998653
No 24
>PF09349 OHCU_decarbox: OHCU decarboxylase; InterPro: IPR018020 The proteins in this entry are OHCU decarboxylase, an enzyme of the purine catabolism that catalyses the conversion of OHCU into S(+)-allantoin []; it is the third step of the conversion of uric acid (a purine derivative) to allantoin. Step one is catalysed by urate oxidase (IPR002042 from INTERPRO) and step two is catalysed by hydroxyisourate hydrolase (IPR000895 from INTERPRO). ; PDB: 3O7I_B 3O7H_B 3O7J_A 3O7K_A 2Q37_A 2O70_B 2O73_C 2O74_C 2O8I_A.
Probab=39.36 E-value=39 Score=20.11 Aligned_cols=19 Identities=16% Similarity=0.389 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHhCCCHH
Q psy18132 42 IDLGDIKQNFLKLYGKTLE 60 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~L~ 60 (64)
.+|..+.+.|+++||....
T Consensus 97 ~~L~~lN~~Y~~kFGf~Fv 115 (159)
T PF09349_consen 97 AELAALNQAYEEKFGFPFV 115 (159)
T ss_dssp HHHHHHHHHHHHHHSS---
T ss_pred HHHHHHHHHHHHHcCCceE
Confidence 4577888999999997653
No 25
>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]
Probab=39.09 E-value=19 Score=21.07 Aligned_cols=21 Identities=38% Similarity=0.620 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHhCCCHHHh
Q psy18132 42 IDLGDIKQNFLKLYGKTLEEY 62 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~L~~~ 62 (64)
.++.+.++.|.+.||.++++.
T Consensus 18 ~D~~ra~~FY~~vFgW~~~~~ 38 (127)
T COG3324 18 SDLERAKAFYEKVFGWTFEDY 38 (127)
T ss_pred CCHHHHHHHHHHhhCceeccc
Confidence 578999999999999999864
No 26
>COG1753 Predicted antotoxin, copG family [Signal transduction mechanisms]
Probab=38.96 E-value=64 Score=17.24 Aligned_cols=43 Identities=16% Similarity=0.150 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q psy18132 13 YLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLY 55 (64)
Q Consensus 13 ~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~ 55 (64)
-|.+.|.+-++.--.+-..|.+++-++|..++..+...=.+.+
T Consensus 25 SFSdvI~~l~~kKr~~levl~~~~g~~s~eEvek~~~e~~~ae 67 (74)
T COG1753 25 SFSDVIRELIEKKRGNLEVLMRAFGTLSEEEVEKIKKEEKEAE 67 (74)
T ss_pred cHHHHHHHHHHHhhhhHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 4566666666655567777888888899999888776544433
No 27
>cd06395 PB1_Map2k5 PB1 domain is essential part of the mitogen-activated protein kinase kinase 5 (Map2k5, alias MEK5) one of the key member of the signaling kinases cascade which involved in angiogenesis and early cardiovascular development. The PB1 domain of Map2k5 interacts with the PB1 domain of another members of kinase cascade MEKK2 (or MEKK3). A canonical PB1-PB1 interaction, involving heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The Map2k5 protein contains a type I PB1 domain.
Probab=38.37 E-value=30 Score=19.06 Aligned_cols=20 Identities=15% Similarity=0.260 Sum_probs=16.6
Q ss_pred HHhCCHHHHHHHHHHHHHHh
Q psy18132 36 IVTRSEIDLGDIKQNFLKLY 55 (64)
Q Consensus 36 l~~rs~~~l~~i~~~Y~~~~ 55 (64)
++-||..+|++.-+.|...+
T Consensus 54 ITVRSDeEm~AMlsyy~~~~ 73 (91)
T cd06395 54 ITVRSDEEMKAMLSYYCSTV 73 (91)
T ss_pred eEecchHHHHHHHHHHHHHH
Confidence 34599999999999998764
No 28
>PF02964 MeMO_Hyd_G: Methane monooxygenase, hydrolase gamma chain; InterPro: IPR004222 Methane monooxygenases (1.14.13.25 from EC) catalyse the oxidation of methane to methanol in the presence of oxygen and NADH in methanotrophs. It has a broad specificity, hydroxylating many alkanes, and converting alkenes into the corresponding epoxides. In additional reactions, CO is oxidized to CO2, ammonia is oxidized to hydroxylamine, and some aromatic compounds and cyclic alkanes can also be hydroxylated, although more slowly. In Methylococcus capsulatus there are two forms of the enzyme, a soluble and a membrane-bound type. The soluble form consists of 3 components, A, B and C. Protein A is made up of 3 chains, alpha, beta and gamma. This entry represents the gamma chain of methane monooxygenases. Structurally, the gamma chain contains two domains, each consisting of a three helices arranged in an open bundle topology [, ]. ; GO: 0015049 methane monooxygenase activity, 0015947 methane metabolic process; PDB: 1FZ1_E 1FZ4_F 1XU3_E 1FZ7_F 1XVB_F 1FZ3_E 1XMG_E 1FZI_F 1XVD_F 1FZ2_E ....
Probab=36.56 E-value=30 Score=21.07 Aligned_cols=44 Identities=18% Similarity=0.270 Sum_probs=26.6
Q ss_pred HHHHHHHHHhhCCCCCHH-----HHHHHHHhCCHHHHHHHHHHHHHHhCCC
Q psy18132 13 YLARRLKDAMAGIGTDDK-----TLIRIIVTRSEIDLGDIKQNFLKLYGKT 58 (64)
Q Consensus 13 ~~a~~l~~a~kg~gtde~-----~Li~il~~rs~~~l~~i~~~Y~~~~g~~ 58 (64)
.+++.+.++..| .|-. ++-.+=..-+..+++.|...|.+.|+-+
T Consensus 68 sd~~l~tkt~~G--~dA~~V~~~~~ak~~a~~~~yEaErI~i~FR~~~KPP 116 (161)
T PF02964_consen 68 SDADLLTKTTTG--EDAQQVAAEWLAKMAAAKDKYEAERIHIEFRQAYKPP 116 (161)
T ss_dssp -HHHHHHB-TTS---BHHHHHHHHHHHHHC-SSHHHHHHHHHHHHHHHTTT
T ss_pred cHHHHHHhcccc--ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhcCCC
Confidence 456666666554 4433 3333333467889999999999988654
No 29
>PF09832 DUF2059: Uncharacterized protein conserved in bacteria (DUF2059); InterPro: IPR018637 This entry contains proteins that have no known function. ; PDB: 2X3O_B 3OAO_A.
Probab=36.21 E-value=21 Score=17.69 Aligned_cols=23 Identities=17% Similarity=0.198 Sum_probs=18.3
Q ss_pred CCHHHHHHHHHHHHHHhCCCHHH
Q psy18132 39 RSEIDLGDIKQNFLKLYGKTLEE 61 (64)
Q Consensus 39 rs~~~l~~i~~~Y~~~~g~~L~~ 61 (64)
=++.++..+...|.+-.|+.+.+
T Consensus 17 ft~~El~~i~~FY~Sp~Gqk~~~ 39 (64)
T PF09832_consen 17 FTEEELDAILAFYESPLGQKIVA 39 (64)
T ss_dssp S-HHHHHHHHHHHHSHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCHHhHHHHH
Confidence 47899999999999988877653
No 30
>smart00717 SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains.
Probab=36.20 E-value=44 Score=14.58 Aligned_cols=33 Identities=9% Similarity=0.101 Sum_probs=22.8
Q ss_pred HHHHHHHHhhCCC-CCHHHHHHHHHhCCHHHHHH
Q psy18132 14 LARRLKDAMAGIG-TDDKTLIRIIVTRSEIDLGD 46 (64)
Q Consensus 14 ~a~~l~~a~kg~g-tde~~Li~il~~rs~~~l~~ 46 (64)
+-..|..++...| .+=..+.+.+-+|++.++..
T Consensus 8 E~~~l~~~~~~~g~~~w~~Ia~~~~~rt~~~~~~ 41 (49)
T smart00717 8 EDELLIELVKKYGKNNWEKIAKELPGRTAEQCRE 41 (49)
T ss_pred HHHHHHHHHHHHCcCCHHHHHHHcCCCCHHHHHH
Confidence 3456677777778 66666666677788887643
No 31
>PF11081 DUF2890: Protein of unknown function (DUF2890); InterPro: IPR021304 This entry contains the 33kDa and 22kDa phosphoproteins from vertebrate adenoviruses.
Probab=35.76 E-value=1.1e+02 Score=19.27 Aligned_cols=29 Identities=24% Similarity=0.225 Sum_probs=22.4
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHhCC
Q psy18132 29 DKTLIRIIVTRSEIDLGDIKQNFLKLYGK 57 (64)
Q Consensus 29 e~~Li~il~~rs~~~l~~i~~~Y~~~~g~ 57 (64)
...--+.|-.|+..++..+...|..+|.+
T Consensus 154 rSlTRr~Lyh~~e~~l~r~l~dae~L~~k 182 (187)
T PF11081_consen 154 RSLTRRCLYHRGEDQLQRTLEDAEALYNK 182 (187)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 44444556678999999999999998864
No 32
>PRK08487 DNA polymerase III subunit delta; Validated
Probab=34.59 E-value=1.2e+02 Score=19.86 Aligned_cols=50 Identities=14% Similarity=0.149 Sum_probs=34.0
Q ss_pred ccccccCchHHHHHHHHHHhhCCC--CCHHHHHHHHHhCCHHHHHHHHHHHHH
Q psy18132 3 RMQCVKDKSSYLARRLKDAMAGIG--TDDKTLIRIIVTRSEIDLGDIKQNFLK 53 (64)
Q Consensus 3 iv~~~~~~~~~~a~~l~~a~kg~g--tde~~Li~il~~rs~~~l~~i~~~Y~~ 53 (64)
++.|...++.-....+.+-++..| .+..+ ++.|+.+.+.++..+.+.-++
T Consensus 129 ~v~~~~~~~~~l~~~i~~~~~~~g~~i~~~a-~~~L~~~~g~dl~~l~~ELeK 180 (328)
T PRK08487 129 FVRFFKPNAREALELLQERAKELGLDIDQNA-LNHLYFIHNEDLALAANELEK 180 (328)
T ss_pred EEEeeCCCHHHHHHHHHHHHHHhCCCCCHHH-HHHHHHHhCcHHHHHHHHHHH
Confidence 344554445555677777776655 44444 577788888899988888766
No 33
>TIGR03180 UraD_2 OHCU decarboxylase. Previously thought to only proceed spontaneously, the decarboxylation of 2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) has been recently been shown to be catalyzed by this enzyme in Mus musculus. Homologs of this enzyme are found adjacent to and fused with uricase in a number of prokaryotes and are represented by this model. This model is a separate (but related) clade from that represented by TIGR3164. This model places a second homolog in streptomyces species which (are not in the vicinity of other urate catabolism associated genes) below the trusted cutoff.
Probab=34.46 E-value=41 Score=20.18 Aligned_cols=18 Identities=11% Similarity=0.265 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHhCCCH
Q psy18132 42 IDLGDIKQNFLKLYGKTL 59 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~L 59 (64)
..+..+.++|+++||...
T Consensus 94 ~~L~~lN~~Y~~kFGfpF 111 (158)
T TIGR03180 94 AALLEGNAAYEEKFGRIF 111 (158)
T ss_pred HHHHHHHHHHHHHCCCeE
Confidence 467888899999998653
No 34
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=34.30 E-value=53 Score=22.56 Aligned_cols=25 Identities=20% Similarity=0.179 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHhhCCCCCHHHHHHH
Q psy18132 11 SSYLARRLKDAMAGIGTDDKTLIRI 35 (64)
Q Consensus 11 ~~~~a~~l~~a~kg~gtde~~Li~i 35 (64)
...+...|++.||.-||.|.++-.+
T Consensus 284 ~plYla~lfkvMKekg~HEgcIeQi 308 (398)
T COG3007 284 MPLYLAILFKVMKEKGTHEGCIEQI 308 (398)
T ss_pred ccHHHHHHHHHHHHcCcchhHHHHH
Confidence 3455788999999999999997554
No 35
>PF08587 UBA_2: Ubiquitin associated domain (UBA) ; InterPro: IPR013896 This is a UBA (ubiquitin associated) protein []. Ubiquitin is involved in intracellular proteolysis. ; GO: 0004674 protein serine/threonine kinase activity; PDB: 3H4J_B.
Probab=33.78 E-value=6.2 Score=19.28 Aligned_cols=28 Identities=18% Similarity=0.389 Sum_probs=13.2
Q ss_pred CCCCHHHHHHHHHhCCH-HHHHHHHHHHH
Q psy18132 25 IGTDDKTLIRIIVTRSE-IDLGDIKQNFL 52 (64)
Q Consensus 25 ~gtde~~Li~il~~rs~-~~l~~i~~~Y~ 52 (64)
.|-+.+-+.+.|-+..+ ++..+|+.+|.
T Consensus 13 MGY~kdeI~eaL~~~~~~~~~neIkDAY~ 41 (46)
T PF08587_consen 13 MGYDKDEIYEALESSEPSPQSNEIKDAYL 41 (46)
T ss_dssp T---HHHHHHHCCSSS------SSCCHHH
T ss_pred hCCCHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 46666666666654444 77888888885
No 36
>PRK13798 putative OHCU decarboxylase; Provisional
Probab=33.54 E-value=43 Score=20.29 Aligned_cols=18 Identities=11% Similarity=0.231 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHhCCCH
Q psy18132 42 IDLGDIKQNFLKLYGKTL 59 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~L 59 (64)
..+..+.++|+++||...
T Consensus 99 ~~l~~lN~~Y~~kFGfpF 116 (166)
T PRK13798 99 AALAAGNRAYEEKFGFVF 116 (166)
T ss_pred HHHHHHHHHHHHhCCCeE
Confidence 567888899999998653
No 37
>cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.
Probab=33.08 E-value=49 Score=14.19 Aligned_cols=31 Identities=13% Similarity=0.148 Sum_probs=21.3
Q ss_pred HHHHHHHhhCCC-CCHHHHHHHHHhCCHHHHH
Q psy18132 15 ARRLKDAMAGIG-TDDKTLIRIIVTRSEIDLG 45 (64)
Q Consensus 15 a~~l~~a~kg~g-tde~~Li~il~~rs~~~l~ 45 (64)
-..|..++...| .+=..+.+.+-+|+..++.
T Consensus 7 ~~~l~~~~~~~g~~~w~~Ia~~~~~rs~~~~~ 38 (45)
T cd00167 7 DELLLEAVKKYGKNNWEKIAKELPGRTPKQCR 38 (45)
T ss_pred HHHHHHHHHHHCcCCHHHHHhHcCCCCHHHHH
Confidence 455667777777 6666777777778877654
No 38
>PF06854 Phage_Gp15: Bacteriophage Gp15 protein; InterPro: IPR009660 This entry describes Gp15 from Bacteriophage A500 (Listeria phage A500), related proteins in other bacteriophage, and prophage regions of bacterial genomes. The function is unknown.
Probab=32.91 E-value=67 Score=19.79 Aligned_cols=22 Identities=41% Similarity=0.463 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHhCCCHHHh
Q psy18132 41 EIDLGDIKQNFLKLYGKTLEEY 62 (64)
Q Consensus 41 ~~~l~~i~~~Y~~~~g~~L~~~ 62 (64)
+.|-..|-.+|.+-||.+|.+.
T Consensus 108 ~~Da~~IyasF~~~YgIdL~~~ 129 (183)
T PF06854_consen 108 EQDADYIYASFLQQYGIDLIEE 129 (183)
T ss_pred HHhHHHHHHHHHHHhCccHHHh
Confidence 4788899999999999999543
No 39
>PF05890 Ebp2: Eukaryotic rRNA processing protein EBP2; InterPro: IPR008610 This family consists of several eukaryotic rRNA processing protein EBP2 sequences. Ebp2p is required for the maturation of 25S rRNA and 60S subunit assembly. Ebp2p may be one of the target proteins of Rrs1p for executing the signal to regulate ribosome biogenesis [].
Probab=31.28 E-value=41 Score=22.04 Aligned_cols=12 Identities=17% Similarity=0.476 Sum_probs=6.9
Q ss_pred CCHHHHHHHHHH
Q psy18132 39 RSEIDLGDIKQN 50 (64)
Q Consensus 39 rs~~~l~~i~~~ 50 (64)
.|..||..|++.
T Consensus 115 KSD~HM~KVr~k 126 (271)
T PF05890_consen 115 KSDEHMEKVRQK 126 (271)
T ss_pred cCHHHHHHHHHH
Confidence 455666666554
No 40
>PRK15058 cytochrome b562; Provisional
Probab=30.80 E-value=52 Score=19.36 Aligned_cols=16 Identities=19% Similarity=0.308 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHhC
Q psy18132 41 EIDLGDIKQNFLKLYG 56 (64)
Q Consensus 41 ~~~l~~i~~~Y~~~~g 56 (64)
-.++..+|+.|++.|+
T Consensus 113 a~~l~~lR~eYHkkyr 128 (128)
T PRK15058 113 AEQLKTTRNAYHKKYR 128 (128)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 4678888999998874
No 41
>PF11629 Mst1_SARAH: C terminal SARAH domain of Mst1; InterPro: IPR024205 The SARAH (Sav/Rassf/Hpo) domain is found at the C terminus in three classes of eukaryotic tumour suppressors that give the domain its name. In the Sav (Salvador) and Hpo (Hippo) families, the SARAH domain mediates signal transduction from Hpo via the Sav scaffolding protein to the downstream component Wts (Warts); the phosphorylation of Wts by Hpo triggers cell cycle arrest and apoptosis by down-regulating cyclin E, Diap 1 and other targets []. The SARAH domain is also involved in dimerisation, as in the human Hpo orthologue, Mst1, which homodimerises via its C-terminal SARAH domain. The SARAH domain is found associated with other domains, such as protein kinase domains, WW/rsp5/WWP domain (IPR001202 from INTERPRO), C1 domain (IPR002219 from INTERPRO), LIM domain (IPR001781 from INTERPRO), or the Ras-associating (RA) domain (IPR000159 from INTERPRO).; GO: 0004674 protein serine/threonine kinase activity; PDB: 2JO8_A.
Probab=29.61 E-value=80 Score=15.56 Aligned_cols=15 Identities=13% Similarity=0.375 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHh
Q psy18132 41 EIDLGDIKQNFLKLY 55 (64)
Q Consensus 41 ~~~l~~i~~~Y~~~~ 55 (64)
+.++..++..|+.+-
T Consensus 25 E~Eieelr~RY~~KR 39 (49)
T PF11629_consen 25 EQEIEELRQRYQAKR 39 (49)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 578899999999864
No 42
>PF12241 Enoyl_reductase: Trans-2-enoyl-CoA reductase catalytic region; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=29.45 E-value=76 Score=20.64 Aligned_cols=25 Identities=16% Similarity=0.138 Sum_probs=16.6
Q ss_pred chHHHHHHHHHHhhCCCCCHHHHHH
Q psy18132 10 KSSYLARRLKDAMAGIGTDDKTLIR 34 (64)
Q Consensus 10 ~~~~~a~~l~~a~kg~gtde~~Li~ 34 (64)
-...+...|++-||..|+.|.++-.
T Consensus 203 ~~pLYi~~L~kVMKekG~HEgcIeQ 227 (237)
T PF12241_consen 203 VVPLYISLLYKVMKEKGTHEGCIEQ 227 (237)
T ss_dssp CHHHHHHHHHHHHHHCT----HHHH
T ss_pred cHHHHHHHHHHHHHhcCCCccHHHH
Confidence 3456688999999999999999743
No 43
>smart00222 Sec7 Sec7 domain. Domain named after the S. cerevisiae SEC7 gene product, which is required for proper protein transport through the Golgi. The domain facilitates guanine nucleotide exchange on the small GTPases, ARFs (ADP ribosylation factors).
Probab=28.68 E-value=1.4e+02 Score=18.10 Aligned_cols=51 Identities=18% Similarity=0.220 Sum_probs=35.7
Q ss_pred CchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHh---CCCHHHhh
Q psy18132 9 DKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLY---GKTLEEYI 63 (64)
Q Consensus 9 ~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~---g~~L~~~I 63 (64)
+-+.-.|+.|+. ..|.|...+-+.|+.+. ..-..+...|-+.+ |.++.+++
T Consensus 33 ~~~~~ia~fl~~---~~~l~k~~ig~~l~~~~-~~~~~vL~~y~~~f~f~~~~i~~AL 86 (187)
T smart00222 33 DDPQDVADFLSK---NEGLNKKAIGDYLGEHD-EFNRLVLHAFVDLFDFSAKDLDQAL 86 (187)
T ss_pred CCHHHHHHHHHh---CCCCCHHHHHHHHcCCC-hHHHHHHHHHHHhcCcCCCcHHHHH
Confidence 335556777764 35899999999998744 45566777787765 66777665
No 44
>PRK05289 UDP-N-acetylglucosamine acyltransferase; Provisional
Probab=28.60 E-value=79 Score=20.17 Aligned_cols=19 Identities=16% Similarity=0.335 Sum_probs=15.6
Q ss_pred CCHHHHHHHHHHHHHHhCC
Q psy18132 39 RSEIDLGDIKQNFLKLYGK 57 (64)
Q Consensus 39 rs~~~l~~i~~~Y~~~~g~ 57 (64)
-++.++..|+++|...|..
T Consensus 204 ~~~~~~~~i~~a~~~~~~~ 222 (262)
T PRK05289 204 FSREEIHALRRAYKLLYRS 222 (262)
T ss_pred CCHHHHHHHHHHHHHHHHc
Confidence 4678888999999998865
No 45
>PF13348 Y_phosphatase3C: Tyrosine phosphatase family C-terminal region; PDB: 1YWF_A 2OZ5_B.
Probab=28.54 E-value=86 Score=15.53 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=10.0
Q ss_pred CCCCHHHHHHHHHhCCHHHHHHHHHHH
Q psy18132 25 IGTDDKTLIRIIVTRSEIDLGDIKQNF 51 (64)
Q Consensus 25 ~gtde~~Li~il~~rs~~~l~~i~~~Y 51 (64)
.|+-+.-|.+.+- =++.++..+++.|
T Consensus 42 yGs~e~Yl~~~lg-l~~~~i~~Lr~~l 67 (68)
T PF13348_consen 42 YGSVENYLREELG-LSEEDIERLRERL 67 (68)
T ss_dssp HSSHHHHHHHT-T---HHHHHHHHHHH
T ss_pred cCCHHHHHHHcCC-CCHHHHHHHHHHc
Confidence 4444444433222 3444555554443
No 46
>PRK07914 hypothetical protein; Reviewed
Probab=28.45 E-value=1.6e+02 Score=19.12 Aligned_cols=52 Identities=17% Similarity=0.282 Sum_probs=36.7
Q ss_pred ccccccC-chHHHHHHHHHHhhCCC--CCHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q psy18132 3 RMQCVKD-KSSYLARRLKDAMAGIG--TDDKTLIRIIVTRSEIDLGDIKQNFLKLY 55 (64)
Q Consensus 3 iv~~~~~-~~~~~a~~l~~a~kg~g--tde~~Li~il~~rs~~~l~~i~~~Y~~~~ 55 (64)
++.|... ++......+.+..+..| .+..+ .+.|+.+...++..+.++.++++
T Consensus 121 ~v~~~~~~~~~~l~~wi~~~a~~~g~~i~~~A-~~~L~~~~g~dl~~l~~EleKL~ 175 (320)
T PRK07914 121 VHPCARITKAAERADFVRKEFRSLRVKVDDDT-VTALLDAVGSDLRELASACSQLV 175 (320)
T ss_pred EEecCCCCCHHHHHHHHHHHHHHcCCCCCHHH-HHHHHHHHCccHHHHHHHHHHHh
Confidence 4455544 45555778887777666 45554 57788888889999999888764
No 47
>PF05247 FlhD: Flagellar transcriptional activator (FlhD); InterPro: IPR007911 FlhD combines with FlhC to form a regulatory complex in Escherichia coli. This complex has been shown to be a global regulator involved in many cellular processes as well as a flagellar transcriptional activator []. The FlhD protein is dimeric. The dimer is tightly coupled, with an intimate contact surface, implying that the dimer does not easily dissociate. The FlhD monomer is predominantly alpha-helical []. ; GO: 0003677 DNA binding, 0009296 flagellum assembly, 0045893 positive regulation of transcription, DNA-dependent; PDB: 2AVU_C 1G8E_A.
Probab=27.60 E-value=67 Score=18.21 Aligned_cols=29 Identities=17% Similarity=0.332 Sum_probs=19.8
Q ss_pred HHhhCCCCCHHHHHHHHHhCCHHHHHHHHH
Q psy18132 20 DAMAGIGTDDKTLIRIIVTRSEIDLGDIKQ 49 (64)
Q Consensus 20 ~a~kg~gtde~~Li~il~~rs~~~l~~i~~ 49 (64)
.||-..|.+++. .+++.+-|+.|+.++..
T Consensus 31 ~A~frLGis~e~-ad~L~~Ls~~Ql~kLA~ 59 (104)
T PF05247_consen 31 EAMFRLGISEEV-ADLLASLSPAQLVKLAS 59 (104)
T ss_dssp HHHHHHT--HHH-HHHHHH--HHHHHHHHS
T ss_pred HHHHHcCCCHHH-HHHHHcCCHHHHHHHHc
Confidence 577788988884 68888899999988754
No 48
>PF03461 TRCF: TRCF domain; InterPro: IPR005118 This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the transcription-repair-coupling factor (TRCF) which releases RNAP and the truncated transcript.; GO: 0003684 damaged DNA binding, 0004386 helicase activity, 0005524 ATP binding, 0006281 DNA repair; PDB: 2QSR_A 2EYQ_A.
Probab=27.27 E-value=1.2e+02 Score=16.62 Aligned_cols=28 Identities=29% Similarity=0.552 Sum_probs=18.7
Q ss_pred HHHHhCCHHHHHHHHHHHHHHhCCCHHH
Q psy18132 34 RIIVTRSEIDLGDIKQNFLKLYGKTLEE 61 (64)
Q Consensus 34 ~il~~rs~~~l~~i~~~Y~~~~g~~L~~ 61 (64)
++-..++..++..+++.-..+||.--++
T Consensus 25 rl~~~~~~~el~~l~~El~DRFG~~P~e 52 (101)
T PF03461_consen 25 RLASAESEEELEDLREELIDRFGPLPEE 52 (101)
T ss_dssp HHHC--SHHHHHHHHHHHHHHH-S--HH
T ss_pred HHhhCCCHHHHHHHHHHHHHHcCCCcHH
Confidence 3444578999999999999999986543
No 49
>cd01763 Sumo Small ubiquitin-related modifier (SUMO). Small ubiquitin-related modifier (SUMO) proteins are conjugated to numerous intracellular targets and serve to modulate protein interaction, localization, activity or stability. SUMO (also known as "Smt3" and "sentrin" in other organisms) is linked to several different pathways, including nucleocytoplasmic transport. Attachment of SUMO to targets proteins is stimulated by PIAS (Protein inhibitor of activated STATs) proteins which serve as E3-like ligases.
Probab=27.00 E-value=69 Score=16.91 Aligned_cols=22 Identities=9% Similarity=0.282 Sum_probs=17.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCHH
Q psy18132 39 RSEIDLGDIKQNFLKLYGKTLE 60 (64)
Q Consensus 39 rs~~~l~~i~~~Y~~~~g~~L~ 60 (64)
+...-+..++++|++..|.+..
T Consensus 29 ~~~~~l~~l~~~y~~~~gi~~~ 50 (87)
T cd01763 29 KRSTPLKKLMEAYCQRQGLSMN 50 (87)
T ss_pred cCCCHHHHHHHHHHHHhCCCcc
Confidence 3446789999999999988764
No 50
>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones]
Probab=26.83 E-value=85 Score=21.87 Aligned_cols=28 Identities=18% Similarity=0.436 Sum_probs=21.0
Q ss_pred CCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCC
Q psy18132 27 TDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKT 58 (64)
Q Consensus 27 tde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~ 58 (64)
-|+..|++||+-- -++|-..|+.+|+.+
T Consensus 301 Lde~aLv~ILteP----kNAlvKQYq~Lf~~d 328 (408)
T COG1219 301 LDEDALVQILTEP----KNALVKQYQKLFEMD 328 (408)
T ss_pred cCHHHHHHHHhcc----cHHHHHHHHHHhccc
Confidence 5889999999843 356777888888643
No 51
>COG3742 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.60 E-value=1.2e+02 Score=17.95 Aligned_cols=54 Identities=15% Similarity=0.140 Sum_probs=30.1
Q ss_pred cccccccCchHHHHHHHHHHhhCCC------CCHHHHHHHHHhCCHHHHHHHHHHHHHHhCC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIG------TDDKTLIRIIVTRSEIDLGDIKQNFLKLYGK 57 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~g------tde~~Li~il~~rs~~~l~~i~~~Y~~~~g~ 57 (64)
+||.++.+-+ +|..+.+++...+ ....-.+.+|..|-.+....+.+.+....+.
T Consensus 7 aivAil~~E~--~A~~~~~~la~a~~~~~Sa~~~~E~~~vl~rr~~p~a~~~vd~~l~~~~~ 66 (131)
T COG3742 7 AIVAILNDEP--DAEALAAALADAHVRRMSAASYLEAAAVLTRRGGPEARRLVDLLLSEAGA 66 (131)
T ss_pred HHHHHHhCCc--chHHHHHHHhcCCCeeechhHHHHHHHHHHhhcCcHHHHHHHHHHHhcCC
Confidence 4555665554 6777777776544 2223334455666666666665555554443
No 52
>PF13758 Prefoldin_3: Prefoldin subunit
Probab=26.48 E-value=1.3e+02 Score=16.95 Aligned_cols=40 Identities=18% Similarity=0.226 Sum_probs=31.0
Q ss_pred CchHHHHHHHHHHhhCCCCCHHHHHHHHHh-----CCHHHHHHHH
Q psy18132 9 DKSSYLARRLKDAMAGIGTDDKTLIRIIVT-----RSEIDLGDIK 48 (64)
Q Consensus 9 ~~~~~~a~~l~~a~kg~gtde~~Li~il~~-----rs~~~l~~i~ 48 (64)
++..-+-..++.-+.|...+++-+-+||.. |++.|+..+-
T Consensus 29 ~~~~e~l~~i~r~f~g~lv~~kEi~~ilG~~~~i~Rt~~Qvv~~l 73 (99)
T PF13758_consen 29 DATREDLLRIRRDFGGSLVTEKEIKEILGEGQGITRTREQVVDVL 73 (99)
T ss_pred CCCHHHHHHHHHhcCcccccHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence 556666777888899999999999888875 8887765543
No 53
>PF02978 SRP_SPB: Signal peptide binding domain; InterPro: IPR004125 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the M domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle; PDB: 2FFH_B 3NDB_B 2V3C_C 1QZW_G 1QZX_B 3KL4_A 2JQE_A 1HQ1_A 1RY1_W 1MFQ_C ....
Probab=25.94 E-value=1.2e+02 Score=16.87 Aligned_cols=27 Identities=15% Similarity=0.172 Sum_probs=12.9
Q ss_pred CchHHHHHHHHHHhhCCCCCHHHHHHH
Q psy18132 9 DKSSYLARRLKDAMAGIGTDDKTLIRI 35 (64)
Q Consensus 9 ~~~~~~a~~l~~a~kg~gtde~~Li~i 35 (64)
+|-.....+.+.--+|.|+...-+.+.
T Consensus 67 ~p~ll~~sR~~RIA~GSG~~~~eV~~l 93 (104)
T PF02978_consen 67 NPKLLNESRRRRIARGSGTTVQEVNEL 93 (104)
T ss_dssp CGGGHHHHHHHHHHHHTTS-HHHHHHH
T ss_pred CccccchHHHHHHHHHcCCCHHHHHHH
Confidence 344444555555555555554444333
No 54
>cd06150 YjgF_YER057c_UK114_like_2 This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.
Probab=25.88 E-value=38 Score=18.42 Aligned_cols=41 Identities=12% Similarity=0.214 Sum_probs=26.5
Q ss_pred HHHHHhhCCCCCHHHHHHH-HHhCCHHHHHHHHHHHHHHhCC
Q psy18132 17 RLKDAMAGIGTDDKTLIRI-IVTRSEIDLGDIKQNFLKLYGK 57 (64)
Q Consensus 17 ~l~~a~kg~gtde~~Li~i-l~~rs~~~l~~i~~~Y~~~~g~ 57 (64)
.|...++..|.+-.-++.+ +--++..+...+.+.|.+.|+.
T Consensus 37 nl~~~L~~~G~~~~dvvk~~vyl~d~~~~~~~~~~~~~~f~~ 78 (105)
T cd06150 37 KIDALLAEAGSDKSRILSATIWLADMADFAAMNAVWDAWVPP 78 (105)
T ss_pred HHHHHHHHcCCCHHHEEEEEEEEccHHHHHHHHHHHHHHcCC
Confidence 3445556666555554444 2226678899999999988863
No 55
>PRK02909 transcriptional activator FlhD; Provisional
Probab=25.52 E-value=1.3e+02 Score=17.16 Aligned_cols=29 Identities=14% Similarity=0.273 Sum_probs=23.6
Q ss_pred HHhhCCCCCHHHHHHHHHhCCHHHHHHHHH
Q psy18132 20 DAMAGIGTDDKTLIRIIVTRSEIDLGDIKQ 49 (64)
Q Consensus 20 ~a~kg~gtde~~Li~il~~rs~~~l~~i~~ 49 (64)
.|+-..|.+++. .+++.+-|+.|+.++.+
T Consensus 31 ~A~FRLGis~e~-Ad~L~~Ls~~QlvkLA~ 59 (105)
T PRK02909 31 SAMFRLGISEEM-ADILAALTLAQMVKLAE 59 (105)
T ss_pred HHHHHhCCCHHH-HHHHHhCCHHHHHHHhc
Confidence 467778988887 58888899999988865
No 56
>TIGR03610 RutC pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.
Probab=25.36 E-value=36 Score=19.42 Aligned_cols=41 Identities=15% Similarity=0.209 Sum_probs=27.3
Q ss_pred HHHHHhhCCCCCHHHHHHH-HHhCCHHHHHHHHHHHHHHhCC
Q psy18132 17 RLKDAMAGIGTDDKTLIRI-IVTRSEIDLGDIKQNFLKLYGK 57 (64)
Q Consensus 17 ~l~~a~kg~gtde~~Li~i-l~~rs~~~l~~i~~~Y~~~~g~ 57 (64)
.|...++..|.+-+-++++ +.-.+..++..+.+.|.+.|+.
T Consensus 58 ni~~iL~~aG~~~~dvv~~~iyl~d~~~~~~~~~~~~~~f~~ 99 (127)
T TIGR03610 58 TIKSVIETAGGTMDDVTFNHIFIRDWADYAAINEVYAEYFPG 99 (127)
T ss_pred HHHHHHHHcCCCHHHEEEEEEEEcCHHHHHHHHHHHHHHcCC
Confidence 3445566667666665554 2225567899999999988863
No 57
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=25.14 E-value=1.1e+02 Score=15.65 Aligned_cols=28 Identities=21% Similarity=0.256 Sum_probs=15.2
Q ss_pred CchHHHHHHHHHHhh------CCCCCHHHHHHHH
Q psy18132 9 DKSSYLARRLKDAMA------GIGTDDKTLIRII 36 (64)
Q Consensus 9 ~~~~~~a~~l~~a~k------g~gtde~~Li~il 36 (64)
.|.+..|..|+.|.. |..++|+.|-+|+
T Consensus 36 ~~~dl~a~~L~~A~~~L~~ItG~~~~ediLd~IF 69 (73)
T PF12631_consen 36 LPLDLVAEDLREALESLGEITGEVVTEDILDNIF 69 (73)
T ss_dssp --HHHHHHHHHHHHHHHHHHCTSS--HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 356677777777763 3446666666554
No 58
>KOG0859|consensus
Probab=24.85 E-value=88 Score=20.04 Aligned_cols=22 Identities=32% Similarity=0.301 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHhCCCHHHh
Q psy18132 41 EIDLGDIKQNFLKLYGKTLEEY 62 (64)
Q Consensus 41 ~~~l~~i~~~Y~~~~g~~L~~~ 62 (64)
-.-|+.|++.|.+.||.....+
T Consensus 77 faFLe~Ik~~F~k~YG~~a~ta 98 (217)
T KOG0859|consen 77 FAFLERIKEDFKKRYGGGAHTA 98 (217)
T ss_pred HHHHHHHHHHHHHHhccchhHH
Confidence 3668999999999999875544
No 59
>COG1460 Uncharacterized protein conserved in archaea [Function unknown]
Probab=24.78 E-value=1.5e+02 Score=17.13 Aligned_cols=39 Identities=26% Similarity=0.322 Sum_probs=26.2
Q ss_pred HHHHHHHhhCCC-CCHHHHHHH--HHhCCHHHHHHHHHHHHH
Q psy18132 15 ARRLKDAMAGIG-TDDKTLIRI--IVTRSEIDLGDIKQNFLK 53 (64)
Q Consensus 15 a~~l~~a~kg~g-tde~~Li~i--l~~rs~~~l~~i~~~Y~~ 53 (64)
|+.+.+-+-+.+ .++.....| ++.+++.+++.|...+..
T Consensus 53 a~e~veEL~~i~~~~e~~avkIadI~P~t~~ElRsIla~e~~ 94 (114)
T COG1460 53 ARELVEELLSIVKMSEKIAVKIADIMPRTPDELRSILAKERV 94 (114)
T ss_pred HHHHHHHHHhhccccHHHHHHHHHhCCCCHHHHHHHHHHccC
Confidence 344443333333 488888888 678999999998876653
No 60
>PF00165 HTH_AraC: Bacterial regulatory helix-turn-helix proteins, AraC family; PDB: 1WPK_A 1ZGW_A 1U8B_A.
Probab=24.78 E-value=73 Score=14.18 Aligned_cols=20 Identities=25% Similarity=0.202 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHhCCCHHHhh
Q psy18132 44 LGDIKQNFLKLYGKTLEEYI 63 (64)
Q Consensus 44 l~~i~~~Y~~~~g~~L~~~I 63 (64)
-..+...|++.+|.+..+.+
T Consensus 22 ~~~f~r~Fk~~~g~tp~~y~ 41 (42)
T PF00165_consen 22 PSYFSRLFKKETGMTPKQYR 41 (42)
T ss_dssp HHHHHHHHHHHTSS-HHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHh
Confidence 34455668888888876654
No 61
>PF09183 DUF1947: Domain of unknown function (DUF1947); InterPro: IPR015266 Members of this entry are a set of hypothetical archaeal proteins. Their exact function has not, as yet, been defined. ; PDB: 1Q7H_A.
Probab=24.61 E-value=75 Score=16.58 Aligned_cols=22 Identities=23% Similarity=0.465 Sum_probs=14.5
Q ss_pred CHHHHHHHHHHHHHHhCCCHHH
Q psy18132 40 SEIDLGDIKQNFLKLYGKTLEE 61 (64)
Q Consensus 40 s~~~l~~i~~~Y~~~~g~~L~~ 61 (64)
|..|+..+.+.=.++||.+|..
T Consensus 6 SkKe~k~~~~k~~~~ygIdi~~ 27 (65)
T PF09183_consen 6 SKKEIKEIKEKIKEKYGIDISG 27 (65)
T ss_dssp -HHHHHHHHHHHHT-TT---TT
T ss_pred cHHHHHHHHHHHHHHhCcCCCc
Confidence 6788889999999999988864
No 62
>cd02198 YjgH_like YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.
Probab=24.53 E-value=37 Score=18.64 Aligned_cols=43 Identities=7% Similarity=0.081 Sum_probs=29.1
Q ss_pred HHHHHHHhhCCCCCHHHHHHHH--HhCCHHHHHHHHHHHHHHhCC
Q psy18132 15 ARRLKDAMAGIGTDDKTLIRII--VTRSEIDLGDIKQNFLKLYGK 57 (64)
Q Consensus 15 a~~l~~a~kg~gtde~~Li~il--~~rs~~~l~~i~~~Y~~~~g~ 57 (64)
-..+...++..|.+-.-++++- ++....++..+.+.|.+.|+.
T Consensus 39 ~~ni~~~L~~aG~~~~dvvk~~vyl~~~~~~~~~~~~~~~~~f~~ 83 (111)
T cd02198 39 FQNLGAVLEAAGCSFDDVVELTTFHVDMAAHLPAFAAVKDEYFKE 83 (111)
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEEeccHHHHHHHHHHHHHHcCC
Confidence 3455666777777776666552 233457888899999888874
No 63
>KOG3426|consensus
Probab=24.42 E-value=1.6e+02 Score=17.21 Aligned_cols=39 Identities=15% Similarity=0.351 Sum_probs=27.1
Q ss_pred HHHHHHH-hhCCC-CCHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy18132 15 ARRLKDA-MAGIG-TDDKTLIRIIVTRSEIDLGDIKQNFLKL 54 (64)
Q Consensus 15 a~~l~~a-~kg~g-tde~~Li~il~~rs~~~l~~i~~~Y~~~ 54 (64)
-..+++- +|..- ||-. +++.|+.....+|.+|...+++.
T Consensus 55 R~~ir~qf~kn~hvTD~r-ViDlLV~kg~~elkeiv~~~kqr 95 (124)
T KOG3426|consen 55 RDKIREQFRKNAHVTDPR-VIDLLVIKGMEELKEIVDHWKQR 95 (124)
T ss_pred HHHHHHHHHhcCCcCCch-hhhHHHHhhHHHHHHHHHHHhCc
Confidence 3444443 34444 5555 47888989999999999988764
No 64
>PF01369 Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 domain was named after the first protein found to contain such a region []. It has been shown to be linked with guanine nucleotide exchange function [, ]. The 3D structure of the domain displays several alpha-helices []. It was found to be associated with other domains involved in guanine nucleotide exchange (e.g., CDC25, Dbl) in mammalian factors [].; GO: 0005086 ARF guanyl-nucleotide exchange factor activity, 0032012 regulation of ARF protein signal transduction, 0005622 intracellular; PDB: 3SWV_A 3L8N_A 2R09_A 2R0D_B 1RE0_B 3LTL_A 1KU1_A 1XSZ_A 1XT0_B 1R8Q_E ....
Probab=24.21 E-value=1.8e+02 Score=17.68 Aligned_cols=51 Identities=20% Similarity=0.319 Sum_probs=33.8
Q ss_pred CchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHh---CCCHHHhh
Q psy18132 9 DKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLY---GKTLEEYI 63 (64)
Q Consensus 9 ~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~---g~~L~~~I 63 (64)
+.+...|+.|+ ...|.|...+-++|.. ....-..|.+.|-+.+ |.++.+++
T Consensus 36 ~~~~~iA~fL~---~~~~l~k~~ige~Lg~-~~~~n~~vL~~y~~~fdf~~~~i~~AL 89 (190)
T PF01369_consen 36 DDPKSIAKFLF---QTPGLDKKKIGEYLGK-DNPFNRDVLKEYISLFDFSGMSIDEAL 89 (190)
T ss_dssp SSHHHHHHHHH---HTTTS-HHHHHHHHTS-SSHHHHHHHHHHHHTSS-TTS-HHHHH
T ss_pred CCHHHHHHHHH---hCCCCCHHHHHHHHhc-cchHHHHHHHHHHHHcCCcCccHHHHH
Confidence 34555676662 4568899999999997 4455577777787754 66776665
No 65
>KOG0625|consensus
Probab=23.70 E-value=1.1e+02 Score=22.00 Aligned_cols=31 Identities=16% Similarity=0.283 Sum_probs=23.7
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHhCCCHH
Q psy18132 30 KTLIRIIVTRSEIDLGDIKQNFLKLYGKTLE 60 (64)
Q Consensus 30 ~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~ 60 (64)
-+...||..|-..-+..|...|++.||+...
T Consensus 392 laWlsIlA~~k~~~vedI~~~~W~~YGR~ff 422 (558)
T KOG0625|consen 392 LAWLSILAHNKQNVVEDIVKEHWAKYGRNFF 422 (558)
T ss_pred HHHHHHHHhcccccHHHHHHHHHHHhCccce
Confidence 3556788875543499999999999998753
No 66
>PF12844 HTH_19: Helix-turn-helix domain; PDB: 3LIS_B 3LFP_A 2XIU_B 2GZU_B 2XJ3_A 1UTX_A 2XI8_B 3F6W_C 3EUS_B.
Probab=23.52 E-value=1e+02 Score=14.75 Aligned_cols=39 Identities=15% Similarity=0.323 Sum_probs=24.1
Q ss_pred hCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHh
Q psy18132 23 AGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEY 62 (64)
Q Consensus 23 kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~ 62 (64)
+..|.+...+..+..+++++....+ ..+...+|.++.+-
T Consensus 20 ~~~~i~~~~i~~~e~g~~~~~~~~l-~~i~~~~~v~~~~l 58 (64)
T PF12844_consen 20 EKLGISRSTISKIENGKRKPSVSTL-KKIAEALGVSLDEL 58 (64)
T ss_dssp HHHTS-HHHHHHHHTTSS--BHHHH-HHHHHHHTS-HHHH
T ss_pred HHHCcCHHHHHHHHCCCcCCCHHHH-HHHHHHhCCCHHHH
Confidence 4567788888888888776655554 44566777777653
No 67
>cd06153 YjgF_YER057c_UK114_like_5 This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.
Probab=23.39 E-value=55 Score=18.31 Aligned_cols=41 Identities=17% Similarity=0.277 Sum_probs=26.4
Q ss_pred HHHHHhhCCCCC-----HHHHHHHH-HhCCHHHHHHHHHHHHHHhCC
Q psy18132 17 RLKDAMAGIGTD-----DKTLIRII-VTRSEIDLGDIKQNFLKLYGK 57 (64)
Q Consensus 17 ~l~~a~kg~gtd-----e~~Li~il-~~rs~~~l~~i~~~Y~~~~g~ 57 (64)
.|...++..|.+ -+-++++- --++..++..+.+.|.+.|+.
T Consensus 44 ni~~~L~~aG~~~~~~~~~dVvk~~vyl~d~~~~~~~~~v~~~~f~~ 90 (114)
T cd06153 44 NIEALLEAAGRGGGAQFLADLLRLKVYLRDREDLPAVRAILAARLGP 90 (114)
T ss_pred HHHHHHHHcCCCCCccchhheeEEEEEEccHHHHHHHHHHHHHHcCC
Confidence 344555666665 44444442 225668899999999998874
No 68
>COG3236 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.70 E-value=1.9e+02 Score=17.67 Aligned_cols=34 Identities=18% Similarity=0.110 Sum_probs=24.8
Q ss_pred HHHHHHHhhCCCC-CHHHHHHHHHhCCHHHHHHHH
Q psy18132 15 ARRLKDAMAGIGT-DDKTLIRIIVTRSEIDLGDIK 48 (64)
Q Consensus 15 a~~l~~a~kg~gt-de~~Li~il~~rs~~~l~~i~ 48 (64)
|+....|+|-.++ |+...-.|+..|||.+-..+-
T Consensus 47 aEhY~~a~K~~~~~D~~~~~aIlaarsP~EAkaLG 81 (162)
T COG3236 47 AEHYFQAQKFLEFLDPAYREAILAARSPMEAKALG 81 (162)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHhcCChHHHHHhc
Confidence 6777788887764 556666778889998876654
No 69
>PRK13430 F0F1 ATP synthase subunit delta; Provisional
Probab=22.40 E-value=1.1e+02 Score=19.88 Aligned_cols=40 Identities=15% Similarity=0.100 Sum_probs=18.7
Q ss_pred HHHHHHhhCC-CCCHHHHHHHHHhCCH-HHHHHHHHHHHHHh
Q psy18132 16 RRLKDAMAGI-GTDDKTLIRIIVTRSE-IDLGDIKQNFLKLY 55 (64)
Q Consensus 16 ~~l~~a~kg~-gtde~~Li~il~~rs~-~~l~~i~~~Y~~~~ 55 (64)
..+.+.++|. ...-.-++.+++.+.. ..+..|.+.|.+.+
T Consensus 153 ~ll~~l~~~~~~~~~~nfl~~lv~~~R~~~l~~i~~~f~~l~ 194 (271)
T PRK13430 153 ELLARLLYGKVTPVTERLAEQAVGRPRGRSIEEGLDELSNLA 194 (271)
T ss_pred HHHHHHHhccCCHHHHHHHHHHHhCCChhhHHHHHHHHHHHH
Confidence 3444555542 1112234555555433 44666666666543
No 70
>cd06155 eu_AANH_C_1 A group of hypothetical eukaryotic proteins, characterized by the presence of an adenine nucleotide alpha hydrolase (AANH)-like domain located N-terminal to two distinctly different YjgF-YER057c-UK114-like domains. This CD contains the first of these domains. The YjgF-YER057c-UK114 protein family is a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.
Probab=22.33 E-value=48 Score=17.93 Aligned_cols=41 Identities=12% Similarity=0.364 Sum_probs=26.9
Q ss_pred HHHHHhhCCCCCHHHHHHHHH-hCCHHHHHHHHHHHHHHhCC
Q psy18132 17 RLKDAMAGIGTDDKTLIRIIV-TRSEIDLGDIKQNFLKLYGK 57 (64)
Q Consensus 17 ~l~~a~kg~gtde~~Li~il~-~rs~~~l~~i~~~Y~~~~g~ 57 (64)
.|.+.++..|.+-.-++++-+ -.+..+...+.+.|.+.|+.
T Consensus 34 ni~~~L~~aG~~~~dVv~~~iyl~d~~~~~~~n~~~~~~f~~ 75 (101)
T cd06155 34 KLREILQSNGLSLSDILYVTLYLRDMSDFAEVNSVYGTFFDK 75 (101)
T ss_pred HHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHHHcCC
Confidence 344555666766555544421 14678899999999998873
No 71
>PF04711 ApoA-II: Apolipoprotein A-II (ApoA-II); InterPro: IPR006801 Apolipoprotein A-II (ApoA-II) is the second major apolipoprotein of high density lipoprotein in human plasma. Mature ApoA-II is present as a dimer of two 77-amino acid chains joined by a disulphide bridge []. ApoA-II regulates many steps in HDL metabolism, and its role in coronary heart disease is unclear []. In bovine serum, the ApoA-II homologue is present in almost free form. Bovine ApoA-II shows antimicrobial activity against Escherichia coli and yeasts in phosphate buffered saline (PBS) [].; GO: 0008289 lipid binding, 0006869 lipid transport, 0042157 lipoprotein metabolic process, 0005576 extracellular region; PDB: 1L6L_W 2OU1_E.
Probab=22.27 E-value=14 Score=19.79 Aligned_cols=21 Identities=33% Similarity=0.596 Sum_probs=13.2
Q ss_pred HHHHHHHHHHH---HhCCCHHHhh
Q psy18132 43 DLGDIKQNFLK---LYGKTLEEYI 63 (64)
Q Consensus 43 ~l~~i~~~Y~~---~~g~~L~~~I 63 (64)
++..+...|.+ .||+||.+-+
T Consensus 6 ~lq~lfsqY~qt~TdYgKDL~Ekv 29 (76)
T PF04711_consen 6 DLQSLFSQYFQTVTDYGKDLVEKV 29 (76)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHc
Confidence 45556655554 5888887643
No 72
>PF14117 DUF4287: Domain of unknown function (DUF4287)
Probab=22.13 E-value=1.1e+02 Score=15.67 Aligned_cols=12 Identities=50% Similarity=0.670 Sum_probs=6.7
Q ss_pred HHHHhCCCHHHh
Q psy18132 51 FLKLYGKTLEEY 62 (64)
Q Consensus 51 Y~~~~g~~L~~~ 62 (64)
-++.||+++++.
T Consensus 9 Ie~kTGk~~~~W 20 (61)
T PF14117_consen 9 IEKKTGKTLDEW 20 (61)
T ss_pred hHHHHCcCHHHH
Confidence 345566666554
No 73
>PRK11166 chemotaxis regulator CheZ; Provisional
Probab=21.96 E-value=71 Score=20.38 Aligned_cols=21 Identities=29% Similarity=0.495 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHhhCCCCCHHH
Q psy18132 11 SSYLARRLKDAMAGIGTDDKT 31 (64)
Q Consensus 11 ~~~~a~~l~~a~kg~gtde~~ 31 (64)
....++.||+|++.+|-|...
T Consensus 21 vG~lTR~LHdsl~~lg~d~~l 41 (214)
T PRK11166 21 IGQLTRMLRDSLRELGLDQAI 41 (214)
T ss_pred HHHHHHHHHHHHHHcCCCHHH
Confidence 345689999999999987754
No 74
>PF03709 OKR_DC_1_N: Orn/Lys/Arg decarboxylase, N-terminal domain; InterPro: IPR005308 This domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure. Ornithine decarboxylase from Lactobacillus 30a (L30a OrnDC, P43099 from SWISSPROT) is representative of the large, pyridoxal-5'-phosphate-dependent decarboxylases that act on lysine, arginine or ornithine. The crystal structure of the L30a OrnDC has been solved to 3.0 A resolution. Six dimers related by C6 symmetry compose the enzymatically active dodecamer (approximately 106 Da). Each monomer of L30a OrnDC can be described in terms of five sequential folding domains. The amino-terminal domain, residues 1 to 107, consists of a five-stranded beta-sheet termed the "wing" domain. Two wing domains of each dimer project inward towards the centre of the dodecamer and contribute to dodecamer stabilisation [].; GO: 0016831 carboxy-lyase activity; PDB: 3Q16_C 3N75_A 1C4K_A 1ORD_A 2VYC_D.
Probab=21.73 E-value=1.1e+02 Score=16.94 Aligned_cols=21 Identities=24% Similarity=0.430 Sum_probs=17.5
Q ss_pred ccccccCchHHHHHHHHHHhh
Q psy18132 3 RMQCVKDKSSYLARRLKDAMA 23 (64)
Q Consensus 3 iv~~~~~~~~~~a~~l~~a~k 23 (64)
.+.+..+.++|.|.++..|.+
T Consensus 93 ~i~l~~~t~~fia~rI~~Aa~ 113 (115)
T PF03709_consen 93 FIWLFEDTAEFIARRIEAAAR 113 (115)
T ss_dssp EEETTTTTHHHHHHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHHHHHH
Confidence 466778899999999998864
No 75
>PF08361 TetR_C_2: MAATS-type transcriptional repressor, C-terminal region; InterPro: IPR013572 This entry is named after the various transcriptional regulatory proteins that it contains, including MtrR (Q6RV06 from SWISSPROT), AcrR (P34000 from SWISSPROT), ArpR (Q9KJC4 from SWISSPROT), TtgR (Q9AIU0 from SWISSPROT) and SmeT (Q8KLP4 from SWISSPROT). These are members of the TetR (tetracycline resistance) family of transcriptional repressors, that are involved in the control of expression of multidrug resistance proteins [, , ]. ; GO: 0003677 DNA binding; PDB: 3BCG_B 2QOP_A 2UXP_B 2XDN_C 2UXH_A 2UXI_B 2UXO_A 2UXU_B 2WUI_A 2W53_A ....
Probab=21.67 E-value=1.1e+02 Score=17.02 Aligned_cols=44 Identities=16% Similarity=0.351 Sum_probs=24.6
Q ss_pred CchHHHHHHHHHHhhCCCCCH--HHHHHHHHhCCH--HHHHHHHHHHH
Q psy18132 9 DKSSYLARRLKDAMAGIGTDD--KTLIRIIVTRSE--IDLGDIKQNFL 52 (64)
Q Consensus 9 ~~~~~~a~~l~~a~kg~gtde--~~Li~il~~rs~--~~l~~i~~~Y~ 52 (64)
||-...-+.+...+.....|+ ..+.+|+..|++ .|+..+.+...
T Consensus 1 dPL~~Lr~~~~~~l~~l~~d~~~Rrv~~I~~~kcE~~~e~~~~~~r~~ 48 (121)
T PF08361_consen 1 DPLERLREALIEALRRLAEDERQRRVFEILFHKCEYVEEMAPVRERRR 48 (121)
T ss_dssp -HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHS--SSTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcccCCcccHHHHHHH
Confidence 344555555566666665555 467788888875 35555544433
No 76
>PHA00542 putative Cro-like protein
Probab=21.57 E-value=1.4e+02 Score=15.60 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=26.0
Q ss_pred hCCCCCHHHHHHHHHhCC----HHHHHHHHHHHHHHh
Q psy18132 23 AGIGTDDKTLIRIIVTRS----EIDLGDIKQNFLKLY 55 (64)
Q Consensus 23 kg~gtde~~Li~il~~rs----~~~l~~i~~~Y~~~~ 55 (64)
+..|.+...+.++.-++. ...+.+|.+.|.+.-
T Consensus 39 ~~lgIs~~tIsr~e~g~~~~p~~~~l~ki~~~~~~~~ 75 (82)
T PHA00542 39 DATDVSQPTICRIYSGRHKDPRYSVVEKLRHLVLNLD 75 (82)
T ss_pred HHHCcCHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhc
Confidence 556788889999987763 577999999998754
No 77
>PF11378 DUF3181: Protein of unknown function (DUF3181); InterPro: IPR021518 This family of proteins has no known function.
Probab=21.56 E-value=37 Score=18.75 Aligned_cols=38 Identities=24% Similarity=0.457 Sum_probs=26.5
Q ss_pred HHHHHHHHhh---CCCCCHHHHHHHHHhCCHHHHHHHHHHH
Q psy18132 14 LARRLKDAMA---GIGTDDKTLIRIIVTRSEIDLGDIKQNF 51 (64)
Q Consensus 14 ~a~~l~~a~k---g~gtde~~Li~il~~rs~~~l~~i~~~Y 51 (64)
.+..+-++++ |.|..+-.|.+.+-+.+..++..|-+.|
T Consensus 47 ~v~~~L~~i~V~lGGG~~~lpL~dLiP~~~~~dL~~iLE~y 87 (87)
T PF11378_consen 47 AVRQILEAIPVKLGGGKSKLPLADLIPSQCQRDLEEILEEY 87 (87)
T ss_pred HHHHHHHcCccccCCCcccccHHHHCCHHHHHHHHHHhhcC
Confidence 3444444443 5678888888888887788888887655
No 78
>PF10319 7TM_GPCR_Srj: Serpentine type 7TM GPCR chemoreceptor Srj; InterPro: IPR019423 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes). They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class j (Srj) from the Str superfamily [, ]. The Srj family is designated as the out-group based on its location in preliminary phylogenetic analyses of the entire superfamily [].
Probab=21.49 E-value=1.9e+02 Score=19.49 Aligned_cols=26 Identities=15% Similarity=0.207 Sum_probs=18.3
Q ss_pred HHHhCC-HHHHHHHHHHHHHHhCCCHH
Q psy18132 35 IIVTRS-EIDLGDIKQNFLKLYGKTLE 60 (64)
Q Consensus 35 il~~rs-~~~l~~i~~~Y~~~~g~~L~ 60 (64)
-.+... ++-.+-|++.|++.||.|-.
T Consensus 151 ~~~~~ad~EiR~YIre~F~e~YG~Ds~ 177 (310)
T PF10319_consen 151 YFCMYADDEIRDYIRESFREVYGVDSM 177 (310)
T ss_pred HhhcCCCHHHHHHHHHHHHHHhCCCCC
Confidence 333444 45567789999999998754
No 79
>PRK09720 cybC cytochrome b562; Provisional
Probab=21.46 E-value=95 Score=17.52 Aligned_cols=15 Identities=20% Similarity=0.377 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHh
Q psy18132 41 EIDLGDIKQNFLKLY 55 (64)
Q Consensus 41 ~~~l~~i~~~Y~~~~ 55 (64)
-.++..+++.|.+.|
T Consensus 85 a~~l~~~Rn~yHkky 99 (100)
T PRK09720 85 AEQLKTTRNSYHKKY 99 (100)
T ss_pred HHHHHHHHHHHHHhc
Confidence 367888899998887
No 80
>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate.
Probab=21.33 E-value=40 Score=21.46 Aligned_cols=18 Identities=28% Similarity=0.523 Sum_probs=14.6
Q ss_pred HHHHHHHhhCCCCCHHHH
Q psy18132 15 ARRLKDAMAGIGTDDKTL 32 (64)
Q Consensus 15 a~~l~~a~kg~gtde~~L 32 (64)
...+.+|=+..||||+.|
T Consensus 192 ~~~ld~AR~s~GTDeDii 209 (212)
T PF09778_consen 192 PEALDEARKSFGTDEDII 209 (212)
T ss_pred HHHHHHHHhccCCCcceE
Confidence 566778888999999865
No 81
>PRK13434 F0F1 ATP synthase subunit delta; Provisional
Probab=21.25 E-value=1.1e+02 Score=18.53 Aligned_cols=38 Identities=18% Similarity=0.409 Sum_probs=23.9
Q ss_pred HHHHHhhCCCCCHH--HHHHHHHhCCH-HHHHHHHHHHHHHh
Q psy18132 17 RLKDAMAGIGTDDK--TLIRIIVTRSE-IDLGDIKQNFLKLY 55 (64)
Q Consensus 17 ~l~~a~kg~gtde~--~Li~il~~rs~-~~l~~i~~~Y~~~~ 55 (64)
.+.+.+++ +.++. -++.+++.+.. ..+..|.+.|.+.+
T Consensus 58 ~l~~~~~~-~~~~~~~nfl~lL~e~~R~~~l~~I~~~f~~l~ 98 (184)
T PRK13434 58 TLAKNLRG-KISDITLNFLGVLLNKGRFIYLPEIQKDFTVEL 98 (184)
T ss_pred HHHHHHHc-cCCHHHHHHHHHHHHCCcHHHHHHHHHHHHHHH
Confidence 34555543 34443 35677776554 67888888888765
No 82
>PRK09499 sifB secreted effector protein SifB; Provisional
Probab=20.87 E-value=2.8e+02 Score=18.69 Aligned_cols=47 Identities=17% Similarity=0.138 Sum_probs=36.9
Q ss_pred chHHHHHHHHHHhhC------CCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Q psy18132 10 KSSYLARRLKDAMAG------IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYG 56 (64)
Q Consensus 10 ~~~~~a~~l~~a~kg------~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g 56 (64)
..+-+=..|++++|. ..+.+..+-+++-.-+|+..+.+.+-|..+++
T Consensus 21 T~esww~~LWEkiKdfFfsTgrakAD~yihEm~f~~~PP~reRL~diFfeLk~ 73 (316)
T PRK09499 21 SQRSFFTLLWEKIKDFFCDTQRSTADQYIKELCDVASPPDAQRLFDLFCALYE 73 (316)
T ss_pred hHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHcCCCCCcHHHHHHHHHHHHH
Confidence 344455677777763 34788999999999999999999999988875
No 83
>KOG0930|consensus
Probab=20.61 E-value=2.9e+02 Score=18.91 Aligned_cols=40 Identities=20% Similarity=0.307 Sum_probs=29.0
Q ss_pred ccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHH
Q psy18132 7 VKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQ 49 (64)
Q Consensus 7 ~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~ 49 (64)
+.+.++-.|..++ ||-|.+..++-++|..|.+..++-+..
T Consensus 89 l~~dpq~iA~fly---kGEGLnKtaIG~yLGer~~~nl~vL~a 128 (395)
T KOG0930|consen 89 LQNDPEDIARFLY---KGEGLNKTAIGDYLGERDEFNLQVLHA 128 (395)
T ss_pred ccCCHHHHHHHHH---hcCCcchhhHhhhhccCchhHHHHHHH
Confidence 3444555566555 588999999999999999888765543
No 84
>PRK13883 conjugal transfer protein TrbH; Provisional
Probab=20.39 E-value=80 Score=19.07 Aligned_cols=23 Identities=13% Similarity=0.224 Sum_probs=17.9
Q ss_pred cccccCchHHHHHHHHHHhhCCC
Q psy18132 4 MQCVKDKSSYLARRLKDAMAGIG 26 (64)
Q Consensus 4 v~~~~~~~~~~a~~l~~a~kg~g 26 (64)
+.+-++.++.|+..|-++++++|
T Consensus 55 ~~l~q~~~D~Fg~aL~~aLR~~G 77 (151)
T PRK13883 55 FELQQPTPDAFGQALVKALRDKG 77 (151)
T ss_pred EEEecCCCcHHHHHHHHHHHHcC
Confidence 34445667788999999999888
No 85
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=20.34 E-value=2.1e+02 Score=17.50 Aligned_cols=27 Identities=19% Similarity=0.299 Sum_probs=21.4
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHhC
Q psy18132 30 KTLIRIIVTRSEIDLGDIKQNFLKLYG 56 (64)
Q Consensus 30 ~~Li~il~~rs~~~l~~i~~~Y~~~~g 56 (64)
..+...+.++++.++.++.+.|.+.|.
T Consensus 64 ~l~~~~~~g~~~~~l~~~~~~f~~~~~ 90 (210)
T TIGR01545 64 LLLWACTFGHREAHLQDLEADFVAAFR 90 (210)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 444566778999999999999987764
No 86
>COG5570 Uncharacterized small protein [Function unknown]
Probab=20.25 E-value=1.4e+02 Score=15.04 Aligned_cols=23 Identities=26% Similarity=0.469 Sum_probs=17.7
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHH
Q psy18132 13 YLARRLKDAMAGIGTDDKTLIRI 35 (64)
Q Consensus 13 ~~a~~l~~a~kg~gtde~~Li~i 35 (64)
-.-+.|.+||...+.|+..+.+.
T Consensus 16 ~le~ei~ea~n~Ps~dd~~i~eL 38 (57)
T COG5570 16 NLEREIQEAMNSPSSDDLAIREL 38 (57)
T ss_pred hHHHHHHHHhcCCCcchHHHHHH
Confidence 34567889999999988887654
No 87
>COG0817 RuvC Holliday junction resolvasome, endonuclease subunit [DNA replication, recombination, and repair]
Probab=20.10 E-value=75 Score=19.45 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=23.0
Q ss_pred cCchHHHHHHHHHHhhCCCCCHHHHHHHHHh
Q psy18132 8 KDKSSYLARRLKDAMAGIGTDDKTLIRIIVT 38 (64)
Q Consensus 8 ~~~~~~~a~~l~~a~kg~gtde~~Li~il~~ 38 (64)
.+-++|-+..+++|.-|-|..++.=+..++.
T Consensus 94 l~v~eY~p~~VKkavvG~G~A~K~QVq~MV~ 124 (160)
T COG0817 94 LPVFEYTPNQVKKAVVGNGKADKEQVQHMVK 124 (160)
T ss_pred CChhhccHHHHHHHhhcCCcccHHHHHHHHH
Confidence 3557888999999999998777655555443
Done!