Query psy18132
Match_columns 64
No_of_seqs 126 out of 1016
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 23:28:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18132.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18132hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hyv_A Annexin A2; calcium-bin 99.8 1.6E-21 5.5E-26 125.5 6.3 63 2-64 67-129 (308)
2 1hm6_A Annexin 1; phospholipid 99.8 2.5E-21 8.6E-26 126.4 5.8 63 2-64 107-169 (346)
3 1w3w_A Annexin A8; coagulation 99.8 7.7E-22 2.6E-26 128.0 3.2 64 1-64 245-308 (327)
4 1axn_A Annexin III; annexin fa 99.8 5E-21 1.7E-25 123.9 6.3 63 2-64 83-145 (323)
5 3chj_A Alpha-14 giardin; calci 99.8 5.4E-21 1.9E-25 124.5 6.4 63 2-64 74-136 (337)
6 1dm5_A Annexin XII E105K mutan 99.8 1.2E-21 4E-26 126.4 2.8 64 1-64 235-298 (315)
7 1n00_A Annexin GH1; membrane-b 99.8 1.7E-21 5.7E-26 126.0 3.3 63 2-64 239-301 (321)
8 2zhj_A Annexin A4; zynogen gra 99.8 1.4E-20 4.7E-25 121.7 6.4 63 2-64 82-144 (322)
9 1yii_A Annexin A5, annexin V, 99.8 2.7E-20 9.2E-25 120.2 6.3 63 2-64 79-141 (320)
10 1dm5_A Annexin XII E105K mutan 99.8 3.1E-20 1.1E-24 119.8 5.9 63 2-64 77-139 (315)
11 1w3w_A Annexin A8; coagulation 99.8 8.4E-20 2.9E-24 118.4 7.1 63 2-64 86-148 (327)
12 1n00_A Annexin GH1; membrane-b 99.8 1.1E-19 3.7E-24 117.5 7.5 62 3-64 10-71 (321)
13 2zhj_A Annexin A4; zynogen gra 99.8 1.4E-20 4.9E-25 121.6 3.2 64 1-64 240-303 (322)
14 1yii_A Annexin A5, annexin V, 99.8 1.6E-19 5.4E-24 116.6 7.9 63 2-64 7-69 (320)
15 1m9i_A Annexin VI; calcium-bin 99.8 8.4E-20 2.9E-24 127.0 6.9 63 2-64 427-489 (672)
16 1m9i_A Annexin VI; calcium-bin 99.8 1E-19 3.6E-24 126.5 6.6 63 2-64 84-146 (672)
17 2ii2_A Alpha-11 giardin; helix 99.8 1.5E-19 5E-24 116.4 6.8 62 2-64 68-129 (310)
18 1hm6_A Annexin 1; phospholipid 99.8 4.1E-20 1.4E-24 120.7 3.9 63 2-64 266-328 (346)
19 2hyv_A Annexin A2; calcium-bin 99.8 3.6E-20 1.2E-24 119.3 3.2 63 2-64 227-289 (308)
20 1axn_A Annexin III; annexin fa 99.8 3.7E-20 1.3E-24 119.8 2.7 63 2-64 242-304 (323)
21 4evf_A Alpha-1 giardin, giardi 99.8 5.3E-19 1.8E-23 113.1 6.3 62 2-64 66-127 (295)
22 3chj_A Alpha-14 giardin; calci 99.7 1.8E-17 6.2E-22 107.9 2.1 60 2-64 235-296 (337)
23 4evf_A Alpha-1 giardin, giardi 99.6 5E-16 1.7E-20 99.3 7.3 54 9-64 2-55 (295)
24 2ii2_A Alpha-11 giardin; helix 99.6 3.4E-16 1.2E-20 100.7 6.5 56 9-64 154-210 (310)
25 3ks4_A Polymerase cofactor VP3 82.7 1.1 3.9E-05 26.5 2.9 44 11-54 65-110 (184)
26 3fke_A Polymerase cofactor VP3 81.7 0.85 2.9E-05 25.7 1.9 44 11-54 10-55 (129)
27 1r8s_E ARNO; protein transport 63.7 22 0.00074 21.5 6.4 54 6-63 39-95 (203)
28 2r09_A Cytohesin-3; autoinhibi 62.1 28 0.00094 22.2 6.1 54 6-63 41-97 (347)
29 3ltl_A Brefeldin A-inhibited g 58.9 28 0.00095 21.1 6.3 54 6-63 45-101 (211)
30 2iw5_B Protein corest, REST co 52.0 11 0.00036 23.6 2.4 42 15-56 141-182 (235)
31 1j2j_B ADP-ribosylation factor 48.6 18 0.00062 16.9 2.4 27 30-56 11-37 (45)
32 2xag_B REST corepressor 1; ami 46.9 13 0.00044 25.4 2.4 42 15-56 388-429 (482)
33 1dd4_C 50S ribosomal protein L 46.8 21 0.00071 16.1 4.2 29 30-58 4-32 (40)
34 3frr_A Uncharacterized protein 46.4 13 0.00046 22.2 2.2 21 42-62 117-137 (191)
35 3t57_A UDP-N-acetylglucosamine 43.4 22 0.00076 22.0 3.0 36 26-63 220-261 (305)
36 1j2z_A Acyl-[acyl-carrier-prot 41.2 34 0.0011 20.8 3.6 25 39-63 202-228 (270)
37 3t72_q RNA polymerase sigma fa 41.2 29 0.00099 18.3 2.9 24 15-38 73-96 (99)
38 4aj5_1 SKA3, spindle and kinet 40.0 19 0.00064 19.6 2.0 21 33-53 79-99 (101)
39 3r0s_A Acyl-[acyl-carrier-prot 39.0 63 0.0022 19.4 4.6 28 27-57 197-224 (266)
40 3hzr_A Tryptophanyl-tRNA synth 38.8 78 0.0027 20.8 5.2 46 7-53 281-342 (386)
41 2o8i_A AGR_C_4230P, hypothetic 38.7 24 0.00083 20.4 2.5 18 42-59 98-115 (165)
42 2o70_A OHCU decarboxylase; URI 38.4 24 0.00084 20.6 2.5 18 42-59 102-119 (174)
43 2elk_A SPCC24B10.08C protein; 38.4 33 0.0011 16.1 3.5 37 16-55 18-56 (58)
44 2lr8_A CAsp8-associated protei 43.7 7 0.00024 20.0 0.0 40 17-57 24-66 (70)
45 1go3_F DNA-directed RNA polyme 37.0 50 0.0017 17.7 4.0 36 14-49 51-88 (107)
46 1iur_A KIAA0730 protein; DNAJ 36.3 22 0.00075 18.4 1.9 22 32-53 18-39 (88)
47 2q37_A OHCU decarboxylase; 2-O 35.9 28 0.00097 20.6 2.5 18 42-59 114-131 (181)
48 1guu_A C-MYB, MYB proto-oncoge 35.1 27 0.00093 15.8 1.9 30 16-45 12-42 (52)
49 3o7i_A OHCU decarboxylase; lya 34.3 31 0.0011 20.5 2.5 17 42-58 123-139 (189)
50 4e6u_A Acyl-[acyl-carrier-prot 32.8 60 0.002 19.4 3.7 24 40-63 210-235 (265)
51 1w0t_A Telomeric repeat bindin 32.3 41 0.0014 15.3 2.4 31 16-46 11-44 (53)
52 1zav_U 50S ribosomal protein L 32.0 34 0.0012 14.3 4.2 28 29-56 3-30 (30)
53 3sjm_A Telomeric repeat-bindin 31.5 28 0.00095 16.9 1.7 31 15-45 19-52 (64)
54 1r4t_A Exoenzyme S; EXOS, GAP, 31.5 47 0.0016 19.3 2.9 34 22-55 89-122 (153)
55 2kwp_A Transcription elongatio 31.2 70 0.0024 17.7 4.0 29 23-58 14-42 (129)
56 3ggy_A Increased sodium tolera 31.1 17 0.0006 21.8 1.0 21 42-62 123-143 (193)
57 1x41_A Transcriptional adaptor 30.6 48 0.0016 15.5 3.8 37 16-55 17-54 (60)
58 2d9a_A B-MYB, MYB-related prot 30.4 47 0.0016 15.4 2.8 36 16-54 17-53 (60)
59 3f75_P Toxopain-2, cathepsin L 29.9 67 0.0023 17.2 3.2 21 38-58 15-35 (106)
60 3tnx_A Papain; hydrolase, cyto 29.4 49 0.0017 21.5 3.0 20 39-58 57-76 (363)
61 2cu7_A KIAA1915 protein; nucle 28.8 57 0.0019 15.8 4.9 37 16-52 18-54 (72)
62 2yus_A SWI/SNF-related matrix- 28.0 65 0.0022 16.2 3.5 36 16-54 27-62 (79)
63 2llk_A Cyclin-D-binding MYB-li 28.0 64 0.0022 16.1 3.1 34 16-53 32-65 (73)
64 1ity_A TRF1; helix-turn-helix, 28.0 56 0.0019 15.7 2.5 31 16-46 19-52 (69)
65 1mty_G Methane monooxygenase h 27.7 96 0.0033 18.1 3.8 43 14-58 71-118 (162)
66 1mhy_G Methane monooxygenase h 27.6 90 0.0031 18.4 3.6 43 14-58 75-122 (169)
67 2npt_A Dual specificity mitoge 27.1 66 0.0023 17.4 2.8 19 37-55 69-87 (106)
68 3rmr_A ATR1, avirulence protei 26.8 63 0.0021 19.6 2.9 24 8-32 174-197 (260)
69 3kj0_B BCL-2-like protein 11; 26.3 43 0.0015 13.7 2.6 15 42-56 12-26 (27)
70 3hsq_A Acyl-[acyl-carrier-prot 26.0 95 0.0032 18.5 3.7 24 40-63 203-228 (259)
71 2z16_A Matrix protein 1, M1; A 24.8 1.1E+02 0.0037 17.8 3.6 40 11-50 28-70 (165)
72 4eqy_A Acyl-[acyl-carrier-prot 24.6 1E+02 0.0034 18.7 3.7 25 39-63 224-250 (283)
73 3a4r_A Nfatc2-interacting prot 24.5 63 0.0022 15.9 2.4 18 42-59 29-46 (79)
74 3osg_A MYB21; transcription-DN 24.2 84 0.0029 16.9 3.0 45 16-60 71-115 (126)
75 1he1_A Exoenzyme S, EXOS; sign 23.5 44 0.0015 19.1 1.7 34 23-56 88-121 (135)
76 2din_A Cell division cycle 5-l 23.2 72 0.0024 15.1 3.7 29 16-45 18-46 (66)
77 1g8e_A Flagellar transcription 22.8 78 0.0027 17.5 2.6 29 20-49 31-59 (116)
78 3f5r_A FACT complex subunit PO 22.2 19 0.00065 21.7 0.0 21 41-61 104-124 (191)
79 1dul_A Signal recognition part 22.0 47 0.0016 16.6 1.5 23 14-36 34-56 (69)
80 3r45_C Holliday junction recog 21.7 50 0.0017 17.0 1.6 18 20-37 7-24 (81)
81 3czg_A Sucrose hydrolase; (alp 21.7 66 0.0023 22.2 2.6 42 15-58 8-49 (644)
82 1gvd_A MYB proto-oncogene prot 21.3 48 0.0016 14.9 1.4 30 16-45 12-42 (52)
83 2ctp_A DNAJ homolog subfamily 21.3 28 0.00094 17.1 0.6 13 42-54 47-59 (78)
84 3e21_A HFAF1, FAS-associated f 21.0 38 0.0013 15.5 0.9 16 48-63 24-39 (45)
85 2qia_A UDP-N-acetylglucosamine 20.8 1E+02 0.0035 18.2 3.2 24 39-62 207-232 (262)
86 1wm3_A Ubiquitin-like protein 20.5 65 0.0022 15.5 1.9 19 41-59 21-39 (72)
No 1
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein, helix BUN heparin, hexasaccharide, metal binding protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB: 2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Probab=99.84 E-value=1.6e-21 Score=125.54 Aligned_cols=63 Identities=33% Similarity=0.562 Sum_probs=60.5
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++.|+.+|+.+||..|++||||+||||.+||+|||+||+.|+..|+++|++.||++|+++|+
T Consensus 67 ~l~~l~~~~~~~DA~~L~~AmkG~Gtde~~LieIL~~Rs~~q~~~Ik~aY~~~y~~~L~~di~ 129 (308)
T 2hyv_A 67 VILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDII 129 (308)
T ss_dssp HHHHHHSCHHHHHHHHHHHHTSTTCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHcCCcHHHHHHHHHHHhhcCCCCHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCHHHHHh
Confidence 478899999999999999999999999999999999999999999999999999999999873
No 2
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form, FULL-length protein comprising protein core and N-terminal domain, metal; 1.80A {Sus scrofa} SCOP: a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Probab=99.84 E-value=2.5e-21 Score=126.40 Aligned_cols=63 Identities=25% Similarity=0.455 Sum_probs=60.5
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++.|+.+|+.+||+.|++||||+||||.+||+|||+||+.|+..|+++|++.||++|+++|+
T Consensus 107 ~l~~l~~~p~~~DA~~L~~AmkG~GTde~~LieIL~~Rsn~q~~~Ik~aY~~~y~~~Le~di~ 169 (346)
T 1hm6_A 107 VALALLKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINRVYKEELKRDLAKDIT 169 (346)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHTSCCCHHHHHH
T ss_pred HHHHHhCCcHHHHHHHHHHHhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhchhHHHHHh
Confidence 478899999999999999999999999999999999999999999999999999999999873
No 3
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=99.84 E-value=7.7e-22 Score=127.96 Aligned_cols=64 Identities=53% Similarity=0.761 Sum_probs=61.6
Q ss_pred CcccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 1 MSRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 1 ~aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++++|..+|+.|||+.|++||||.|||+..|++|+++||+.||..|+++|+++||++|+++|+
T Consensus 245 lalv~~~~~~~~~fA~~L~~amkg~GTdd~~LiriivsR~e~dl~~Ik~~y~~~yg~sL~~~I~ 308 (327)
T 1w3w_A 245 LTVVKCTQNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMYGKTLSSMIM 308 (327)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHhhccCCCCChhHeeeeeeECCHHHHHHHHHHHHHHhCCcHHHHHh
Confidence 3689999999999999999999999999999999999999999999999999999999999874
No 4
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Probab=99.83 E-value=5e-21 Score=123.89 Aligned_cols=63 Identities=32% Similarity=0.534 Sum_probs=60.2
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++.++.+|+.+||..|++||||+||||.+||+|||+||+.|+..|+++|++.||++|+++|+
T Consensus 83 ~l~~l~~~p~~~DA~~L~~A~kG~Gtde~~lieIL~~Rs~~q~~~I~~aY~~~y~~~Le~di~ 145 (323)
T 1axn_A 83 LMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDISQAYYTVYKKSLGDDIS 145 (323)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHCSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHhcCchHHHHHHHHHHhccCCCCHHHHhHHhcCCCHHHHHHHHHHHHHhhCcCHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999873
No 5
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Probab=99.83 E-value=5.4e-21 Score=124.48 Aligned_cols=63 Identities=24% Similarity=0.492 Sum_probs=60.0
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++.++.+|+.|||+.|++||||.||||.+||+|+|+||+.||..|+++|++.||++|+++|+
T Consensus 74 ~l~~l~~~p~~~dA~~L~~AmkG~GTde~~LieIl~tRs~~~l~~Ik~~Y~~~y~~sL~~di~ 136 (337)
T 3chj_A 74 LVLMLYKPRAQLLCELIRGATKGAGTDEKCLVDVLLTIETHEVREIRQLYYQLYNDSLGDVVR 136 (337)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHhCChHHHHHHHHHHhccCCCCChHHhhhhhhcCCHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 467789999999999999999999999999999999999999999999999999999999873
No 6
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent hexamerization switch E76, low calcium form; 1.93A {Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Probab=99.83 E-value=1.2e-21 Score=126.42 Aligned_cols=64 Identities=52% Similarity=0.889 Sum_probs=61.3
Q ss_pred CcccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 1 MSRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 1 ~aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++++|..+|+.|||+.|++||+|.|||+..|++|+++||+.||..|+++|+++||++|+++|+
T Consensus 235 lalv~~~~~~~~~~A~~L~~am~g~Gtd~~~Liriiv~rse~dl~~Ik~~y~~~yg~~L~~~I~ 298 (315)
T 1dm5_A 235 LAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIA 298 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHHhcCchHHHHHHHHHHhhcCCCCHHHHhHHHHhcCHHHHHHHHHHHHHHhCCcHHHHHh
Confidence 3678899999999999999999999999999999999999999999999999999999999874
No 7
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=99.83 E-value=1.7e-21 Score=125.97 Aligned_cols=63 Identities=29% Similarity=0.473 Sum_probs=61.1
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
++++|..+|+.|||+.|++||+|.|||+..|++|+++||+.||..|+++|+++||++|+++|+
T Consensus 239 ~iv~~~~~~~~~~A~~L~~am~g~Gtd~~~Liriiv~rse~dl~~Ik~~y~~~yg~sL~~~I~ 301 (321)
T 1n00_A 239 STVKCLVYPEKYFEKVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADEYQRRNSVPLTRAIV 301 (321)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHTTCCSCTTHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHTT
T ss_pred HHHHHhcCchHHHHHHHHHHhccCCCCHHHHHHHHHHcCHHHHHHHHHHHHHHhCCChHHHHh
Confidence 678999999999999999999999999999999999999999999999999999999999985
No 8
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=99.82 E-value=1.4e-20 Score=121.71 Aligned_cols=63 Identities=32% Similarity=0.518 Sum_probs=60.2
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++.|+.+|+++||+.|++||||+||||.+|++|||+||+.|+..|+++|++.||++|+++|+
T Consensus 82 ~l~~l~~~~~~~DA~~L~~A~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~di~ 144 (322)
T 2zhj_A 82 VILGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIRRINQTYQQQYGRSLEEDIC 144 (322)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHcCCcHHHHHHHHHHhhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCccHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999873
No 9
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=99.81 E-value=2.7e-20 Score=120.22 Aligned_cols=63 Identities=29% Similarity=0.492 Sum_probs=60.2
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
.++.|+.+|+++||+.|++||+|+||||.+|++|||+||+.|+.+|+++|++.||++|+++|+
T Consensus 79 ll~~l~~~~~~~DA~~L~~A~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~di~ 141 (320)
T 1yii_A 79 LMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEANLEDKIT 141 (320)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHccChHHHHHHHHHHHhccCCCchHHHhHHHhcCCHHHHHHHHHHHHHhhCcCHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999873
No 10
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent hexamerization switch E76, low calcium form; 1.93A {Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Probab=99.81 E-value=3.1e-20 Score=119.80 Aligned_cols=63 Identities=35% Similarity=0.572 Sum_probs=60.2
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++.|+.+|+++||+.|++||+|+||||.+|++|||+||+.|+.+|+++|++.||++|+++|+
T Consensus 77 ll~~l~~~~~~~dA~~L~~A~kg~Gtde~~lieIL~tRs~~ql~~i~~~Y~~~yg~~Le~dI~ 139 (315)
T 1dm5_A 77 AALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEII 139 (315)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHSSSCCHHHHHHHHSSCCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHccChhHHHHHHHHHHhhcCCCchhhhhhhHhcCCHHHHHHHHHHHHHHhCccHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999873
No 11
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=99.80 E-value=8.4e-20 Score=118.43 Aligned_cols=63 Identities=32% Similarity=0.520 Sum_probs=60.0
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
.++.++.+|+++||..|++|++|+||||.+|++|||+||+.|+.+|+++|++.||++|+++|+
T Consensus 86 ll~~l~~~~~~~DA~~L~~A~~g~Gtde~~lieIL~tRs~~ql~~i~~~Y~~~yg~sLe~dI~ 148 (327)
T 1w3w_A 86 LIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEEDYGSSLEEDIQ 148 (327)
T ss_dssp HHHHHHSCTTHHHHHHHHHHHHSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHhhccCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCccHHHHHh
Confidence 367788999999999999999999999999999999999999999999999999999999873
No 12
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=99.80 E-value=1.1e-19 Score=117.48 Aligned_cols=62 Identities=21% Similarity=0.342 Sum_probs=58.9
Q ss_pred ccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 3 RMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 3 iv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
++.++.+|+.+||+.|++||||+||||.+||+||++||+.|+..|+++|++.||++|+++|+
T Consensus 10 ~~~~~~~~~~~DA~~L~~A~kG~Gtde~~lieIL~~rs~~q~~~I~~aY~~~y~~~L~~dl~ 71 (321)
T 1n00_A 10 TVPTTVPSVSEDCEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYAETYGEDLLKALD 71 (321)
T ss_dssp CCCSSCCCHHHHHHHHHHHTSSSSCCHHHHHHHHTTCCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred eecCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 36778899999999999999999999999999999999999999999999999999999874
No 13
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=99.80 E-value=1.4e-20 Score=121.63 Aligned_cols=64 Identities=50% Similarity=0.946 Sum_probs=61.3
Q ss_pred CcccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 1 MSRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 1 ~aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++++|.++|+.|||+.|++||+|+|||+..|++|+++||+.||..|+++|++.||++|+++|+
T Consensus 240 lalv~~~~~~~~~~A~~L~~a~~g~Gtde~~lirilv~Rs~~dl~~i~~~Y~~~yg~~L~~~I~ 303 (322)
T 2zhj_A 240 LAIVKCMRNKPAYFAERLYKSMKGLGTDDSTLIRVMVSRAEIDMLDIRANFKRLYGKSLYSFIK 303 (322)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHHhcCccHHHHHHHHHHhccCCCCHHHHHHHHHHcCHHHHHHHHHHHHHHhCCcHHHHHh
Confidence 3688999999999999999999999999999999999999999999999999999999999874
No 14
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=99.80 E-value=1.6e-19 Score=116.62 Aligned_cols=63 Identities=27% Similarity=0.475 Sum_probs=59.0
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++.+...|+.+||+.|++||||+||||.+||+||++||+.|+..|+++|++.||++|+++|+
T Consensus 7 ti~~~~~~~~~~Da~~L~~A~kG~Gtde~~lieIL~~rs~~q~~~I~~~Y~~~~g~~L~~dl~ 69 (320)
T 1yii_A 7 TVTAFSPFDARADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVDDLK 69 (320)
T ss_dssp SCCCCSSCCHHHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSCCHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCcCHHHHHh
Confidence 456677788999999999999999999999999999999999999999999999999999874
No 15
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=99.80 E-value=8.4e-20 Score=126.97 Aligned_cols=63 Identities=33% Similarity=0.547 Sum_probs=60.7
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++.|+.+|+++||..|++||||.||||.+|++|+|+|||.|+.+|+++|++.||+||+++|.
T Consensus 427 ~i~~l~~~p~~~DA~~l~~A~kg~gTde~~LiEIL~tRsn~ei~~ik~aY~~~y~~sLe~di~ 489 (672)
T 1m9i_A 427 LILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIRAINEAYKEDYHKSLEDALS 489 (672)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhccCCCHHHHHHhhhcCCHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999873
No 16
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=99.79 E-value=1e-19 Score=126.49 Aligned_cols=63 Identities=29% Similarity=0.467 Sum_probs=60.6
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++.|+.+|+++||..|++||||.||||.+|++|+|+|||.|+..|+++|+..||+||+++|.
T Consensus 84 ~l~~l~~~p~~~dA~~l~~A~kG~gTde~~LiEIl~tRsn~ei~~ik~aY~~~y~~sLe~di~ 146 (672)
T 1m9i_A 84 LIVGLMRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQMHQLVAAYKDAYERDLEADII 146 (672)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHCCHHHHHHHHHHHHHHSCSCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCCchHHHHHHHHcCCHHHHHHHHHHHHHHhCcchHHHHh
Confidence 478899999999999999999999999999999999999999999999999999999999873
No 17
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A {Giardia intestinalis} PDB: 2iic_A
Probab=99.79 E-value=1.5e-19 Score=116.44 Aligned_cols=62 Identities=13% Similarity=0.088 Sum_probs=59.3
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++.|+.+|+++||..|++||||+ |||.+|++|+|+||+.|+..|+++|++.||++|+++|+
T Consensus 68 ~l~~l~~~p~~~DA~~L~~A~kg~-tde~~lieIL~~Rs~~~l~~I~~aY~~~y~~~Le~di~ 129 (310)
T 2ii2_A 68 VMALGWDCNISARVNVIKKAMKNV-NDFRAIHDVVLIATPDERLKLAQAYKEKTGNDLLQDFV 129 (310)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHSS-CCHHHHHHHHHSCCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHhhCC-CcHHHHHHHHHcCCHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 467889999999999999999998 99999999999999999999999999999999999873
No 18
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form, FULL-length protein comprising protein core and N-terminal domain, metal; 1.80A {Sus scrofa} SCOP: a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Probab=99.79 E-value=4.1e-20 Score=120.68 Aligned_cols=63 Identities=49% Similarity=0.781 Sum_probs=60.8
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
++++|.++|+.|||+.|++||+|+||||..|++|+++||+.||..|+++|++.||++|+++|+
T Consensus 266 ~lv~~~r~~~~~~A~~L~~A~~g~GTde~~lirIlvsRs~~dL~~I~~~Y~~~yg~sL~~~I~ 328 (346)
T 1hm6_A 266 VVVKCATSKPMFFAEKLHQAMKGIGTRHKTLIRIMVSRSEIDMNDIKACYQKLYGISLCQAIL 328 (346)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHTTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHhhcCCccHHHHHHHHHHhcCCCCCHHHHhHHHhhCCHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999884
No 19
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein, helix BUN heparin, hexasaccharide, metal binding protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB: 2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Probab=99.79 E-value=3.6e-20 Score=119.28 Aligned_cols=63 Identities=49% Similarity=0.835 Sum_probs=60.7
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
++|+|.++|+.+||+.|++||+|.||||..|++|+++||+.||..|+++|++.||++|+++|+
T Consensus 227 ~lv~~~~~~~~~~A~~L~~A~~g~GTde~~lirilv~Rs~~~l~~I~~~Y~~~yg~~L~~~I~ 289 (308)
T 2hyv_A 227 NLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQ 289 (308)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHhccCCCcHHHHHHHHHHhccCCCCHHHHHHHHHhcCHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999874
No 20
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Probab=99.78 E-value=3.7e-20 Score=119.83 Aligned_cols=63 Identities=51% Similarity=0.790 Sum_probs=60.9
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
++++|.++|+.+||+.|++||+|+|||+..|++|+++||+.||..|+++|++.||++|+++|+
T Consensus 242 ~lv~~~r~~~~~~A~~L~~A~~g~GTde~~lirilv~Rs~~~L~~i~~~Y~~~yg~~L~~~I~ 304 (323)
T 1axn_A 242 AIVNCVRNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEIDLLDIRTEFKKHYGYSLYSAIK 304 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHhcCCccHHHHHHHHHhcccCCCCHHHhhhhhhhCCHHHHHHHHHHHHHHcCCcHHHHHh
Confidence 688999999999999999999999999999999999999999999999999999999999874
No 21
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding protein, membrane-binding protein, binding protein; 1.90A {Giardia intestinalis} PDB: 4evh_A
Probab=99.77 E-value=5.3e-19 Score=113.08 Aligned_cols=62 Identities=18% Similarity=0.315 Sum_probs=59.0
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
.++.++.+|+++||..|++||||. |||.+|++|+|+||+.|+.+|+++|++.||++|+++|+
T Consensus 66 ~l~~l~~~~~~~dA~~L~~A~kg~-tde~~lieIL~~Rs~~~l~~I~~~Y~~~y~~~Le~di~ 127 (295)
T 4evf_A 66 LLMDLFSDRHEVRAQHIRDALSGR-NDHMAFFDTVILCTPEDWHETVAAYTRMFKKPLVEDFM 127 (295)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHSS-CCHHHHHHHHTSCCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHccCchHHHHHHHHHHhhCC-CCHHHHHHHHHcCCHHHHHHHHHHHHHhccccHHHHHH
Confidence 467888999999999999999998 99999999999999999999999999999999999873
No 22
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Probab=99.66 E-value=1.8e-17 Score=107.92 Aligned_cols=60 Identities=23% Similarity=0.281 Sum_probs=57.4
Q ss_pred cccccccCchHHHHHHHHHHhhCCCCCHHHHHHHHHh--CCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 2 SRMQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVT--RSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 2 aiv~~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~--rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
++++|..+|+.|||+.|++||+|.|| +..|++++++ |++ |..|+++|+++||++|+++|+
T Consensus 235 ~~v~~~~~~~~~~A~~L~~am~g~GT-d~~Liriivs~~r~e--l~~Ik~~Y~~~yg~sL~~~I~ 296 (337)
T 3chj_A 235 LAHDFLYDPCCAAAFSMNVAFAGSGS-DSNRLNRITAMHFRE--CKGCKYYYKKVYGQAFDERCA 296 (337)
T ss_dssp HHHHHHHCHHHHHHHHHHHHTCSSSC-CHHHHHHHHHHHTTT--CTTHHHHHHHHHSSCHHHHHH
T ss_pred HHHHhhcChHHHHHHHHHHHhcCCCc-hhhHhhhhhccchhh--HHHHHHHHHHHhCCcHHHHHH
Confidence 67899999999999999999999999 9999999999 998 999999999999999999874
No 23
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding protein, membrane-binding protein, binding protein; 1.90A {Giardia intestinalis} PDB: 4evh_A
Probab=99.64 E-value=5e-16 Score=99.29 Aligned_cols=54 Identities=28% Similarity=0.366 Sum_probs=51.5
Q ss_pred CchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 9 DKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 9 ~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++..||+.|++|||| |||.+||+||++||+.|++.|+++|++.||++|+++|+
T Consensus 2 ~~~~~da~~L~~A~kG--tde~~li~IL~~rs~~qr~~I~~~Y~~~yg~~L~~~lk 55 (295)
T 4evf_A 2 PKVTDIANELKQAIDA--KDEVQIAFIASEYSAESREKIAKAYVASYGKELPDDIK 55 (295)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHTSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred CCHHHHHHHHHHHHcC--CCHHHHHHHHhCCCHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 6788999999999996 99999999999999999999999999999999999874
No 24
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A {Giardia intestinalis} PDB: 2iic_A
Probab=99.64 E-value=3.4e-16 Score=100.74 Aligned_cols=56 Identities=25% Similarity=0.377 Sum_probs=53.4
Q ss_pred CchHHHHHHHHHHhhC-CCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHhhC
Q psy18132 9 DKSSYLARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLEEYIK 64 (64)
Q Consensus 9 ~~~~~~a~~l~~a~kg-~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~~~I~ 64 (64)
+++..||+.|++|++| +||||.++++||++||+.||.+|+++|++.||++|+++|+
T Consensus 154 ~~a~~DA~~L~~A~~~~~Gtde~~~i~Il~~Rs~~~L~~i~~~Y~~~~g~~l~~~I~ 210 (310)
T 2ii2_A 154 GSVASDAEVLKHNLIDADEPDHEAVVRLIITSTADEYKEINHRFEVLTGKSVQEAIE 210 (310)
T ss_dssp SCHHHHHHHHHHHHTTSSSCCHHHHHHHHHHCCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred hHHHHHHHHHHHHhhcccCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 5689999999999998 8999999999999999999999999999999999999874
No 25
>3ks4_A Polymerase cofactor VP35; RNA-binding protein, protein-RNA complex, interferon, HOST cytoplasm, interferon antiviral system evasion; 2.40A {Reston ebolavirus} PDB: 3ks8_A
Probab=82.75 E-value=1.1 Score=26.52 Aligned_cols=44 Identities=23% Similarity=0.338 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHhhCCCCCHHHHHHHHH--hCCHHHHHHHHHHHHHH
Q psy18132 11 SSYLARRLKDAMAGIGTDDKTLIRIIV--TRSEIDLGDIKQNFLKL 54 (64)
Q Consensus 11 ~~~~a~~l~~a~kg~gtde~~Li~il~--~rs~~~l~~i~~~Y~~~ 54 (64)
+.-+++.|+.-+-|.||.-..|+.++| +|++..|+.+.+.|++.
T Consensus 65 akdl~~il~~HLpG~~TaFHqLvqvI~kvgkD~~~Ldi~h~eFqa~ 110 (184)
T 3ks4_A 65 AKDLKEIMYDHLPGFGTAFHQLVQVICKIGKDNNLLDTIHAEFQAS 110 (184)
T ss_dssp HHHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHccchhHHHHHHHHHHHH
Confidence 445688888889999999999999976 68889999999999874
No 26
>3fke_A Polymerase cofactor VP35; RNA binding domain, coiled coil, interferon antiviral system evasion, RNA replication, RNA-binding; 1.40A {Zaire ebolavirus - mayinga} PDB: 3l25_A 3l26_A 3l28_A 3l27_A 3l29_A 3l2a_A
Probab=81.71 E-value=0.85 Score=25.70 Aligned_cols=44 Identities=23% Similarity=0.335 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHhhCCCCCHHHHHHHHH--hCCHHHHHHHHHHHHHH
Q psy18132 11 SSYLARRLKDAMAGIGTDDKTLIRIIV--TRSEIDLGDIKQNFLKL 54 (64)
Q Consensus 11 ~~~~a~~l~~a~kg~gtde~~Li~il~--~rs~~~l~~i~~~Y~~~ 54 (64)
+.-+++.|+.-+-|.||.-..|+.++| +|++..|+.+...|++.
T Consensus 10 akdl~~il~~hLpG~~TaFH~Lvqvi~kvgkd~~~Ld~~h~~F~~~ 55 (129)
T 3fke_A 10 AKDLRNIMYDHLPGFGTAFHQLVQVICKLGKDSNSLDIIHAEFQAS 55 (129)
T ss_dssp HHHHHHHHHTTSSSSSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHccchhHHHHHHHHHHHH
Confidence 455677888888999999999999976 68888999999988874
No 27
>1r8s_E ARNO; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Homo sapiens} SCOP: a.118.3.1 PDB: 1r8m_E* 1r8q_E* 1s9d_E* 1pbv_A 1bc9_A
Probab=63.68 E-value=22 Score=21.46 Aligned_cols=54 Identities=17% Similarity=0.242 Sum_probs=39.9
Q ss_pred cccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHh---CCCHHHhh
Q psy18132 6 CVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLY---GKTLEEYI 63 (64)
Q Consensus 6 ~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~---g~~L~~~I 63 (64)
++.+.+.-.|+.|+.. .|.|...+-+.|..+.+.. ..|..+|-..+ |.+|.+++
T Consensus 39 ~l~~~p~~iA~fL~~~---~~l~k~~igeyLg~~~~~n-~~vl~~y~~~fdF~~~~ld~AL 95 (203)
T 1r8s_E 39 LLQNTPEEIARFLYKG---EGLNKTAIGDYLGEREELN-LAVLHAFVDLHEFTDLNLVQAL 95 (203)
T ss_dssp SSCSSHHHHHHHHHHC---TTCCHHHHHHHHTCCSHHH-HHHHHHHHHTCCCTTCCHHHHH
T ss_pred CCCCCHHHHHHHHHHC---cCcCHHHHHHHHhccchHH-HHHHHHHHHhcCCCCCcHHHHH
Confidence 3445667778888863 5889999999999877554 47778888876 66777665
No 28
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=62.13 E-value=28 Score=22.18 Aligned_cols=54 Identities=15% Similarity=0.205 Sum_probs=39.4
Q ss_pred cccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHh---CCCHHHhh
Q psy18132 6 CVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLY---GKTLEEYI 63 (64)
Q Consensus 6 ~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~---g~~L~~~I 63 (64)
++.+.+...|+.|+.. .|.|...+-+.|..+.+.. ..+..+|-..+ |.+|.+++
T Consensus 41 ~~~~~~~~ia~fl~~~---~~l~k~~ig~~l~~~~~~~-~~vl~~~~~~~~f~~~~~~~al 97 (347)
T 2r09_A 41 LLQSSPEDVAQFLYKG---EGLNKTVIGDYLGERDDFN-IKVLQAFVELHEFADLNLVQAL 97 (347)
T ss_dssp SSCCSHHHHHHHHHHC---TTCCHHHHHHHHHCCSHHH-HHHHHHHHHTSCCTTCCHHHHH
T ss_pred CCCCCHHHHHHHHHhC---cCcCHHHHHHHhcCCCchH-HHHHHHHHHhcCcCCCCHHHHH
Confidence 3445566778888863 5789999999999876544 46777788776 77777765
No 29
>3ltl_A Brefeldin A-inhibited guanine nucleotide-exchange 1; all alpha, guanine-nucleotide releasing factor, signaling PR; 2.20A {Homo sapiens} SCOP: a.118.3.0 PDB: 3l8n_A 3swv_A
Probab=58.86 E-value=28 Score=21.14 Aligned_cols=54 Identities=9% Similarity=0.158 Sum_probs=40.0
Q ss_pred cccCchHHHHHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHh---CCCHHHhh
Q psy18132 6 CVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLY---GKTLEEYI 63 (64)
Q Consensus 6 ~~~~~~~~~a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~---g~~L~~~I 63 (64)
++.+.+.-.|+.|+. ..|.|...+-+.|..+.+.. ..|..+|-..+ |.+|.+++
T Consensus 45 ~i~~~p~~iA~FL~~---~~~L~k~~igeyLg~~~~fn-~~vL~~yv~~fdF~~~~ld~AL 101 (211)
T 3ltl_A 45 MLGTTPEDIAQFLHQ---EERLDSTQVGEFLGDNDKFN-KEVMYAYVDQHDFSGKDFVSAL 101 (211)
T ss_dssp SSCSSHHHHHHHHHH---CTTSCHHHHHHHHTCCSHHH-HHHHHHHHHTSCCCSSCHHHHH
T ss_pred CCCCCHHHHHHHHHh---CcCccHHHHHHHHhccchhH-HHHHHHHHHhcCCCCCCHHHHH
Confidence 345567777888874 46889999999999876433 67788888875 66777665
No 30
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=52.04 E-value=11 Score=23.59 Aligned_cols=42 Identities=14% Similarity=0.227 Sum_probs=32.0
Q ss_pred HHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Q psy18132 15 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYG 56 (64)
Q Consensus 15 a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g 56 (64)
-..+.+|+...|.|-..+-+.+-+|+..|...--..|+++++
T Consensus 141 ~~lFleAl~kYGKDW~~IAk~VgTKT~~QcKnfY~~~kKRln 182 (235)
T 2iw5_B 141 QLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFN 182 (235)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHSSCCHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHHHHhh
Confidence 456677888889999999999999998887765555555443
No 31
>1j2j_B ADP-ribosylation factor binding protein GGA1, ADP-ribosylation factor 1; protein transport; HET: GTP; 1.60A {Homo sapiens} SCOP: a.7.8.1
Probab=48.61 E-value=18 Score=16.86 Aligned_cols=27 Identities=19% Similarity=0.236 Sum_probs=21.7
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHhC
Q psy18132 30 KTLIRIIVTRSEIDLGDIKQNFLKLYG 56 (64)
Q Consensus 30 ~~Li~il~~rs~~~l~~i~~~Y~~~~g 56 (64)
..|.++|-+..|.|++.-..-.+.+.+
T Consensus 11 k~L~~Ll~s~~P~Dlq~AN~LiK~mv~ 37 (45)
T 1j2j_B 11 KMLARLLKSSHPEDLRAANKLIKEMVQ 37 (45)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCChhhHHHHHHHHHHHhh
Confidence 467788889999999988877777664
No 32
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=46.86 E-value=13 Score=25.45 Aligned_cols=42 Identities=14% Similarity=0.227 Sum_probs=32.2
Q ss_pred HHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Q psy18132 15 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYG 56 (64)
Q Consensus 15 a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g 56 (64)
-..+.+++...|.|-..+-+.+.+||..|.......|+++++
T Consensus 388 ~~~f~~al~~yGkdw~~IA~~VgTKT~~Qvk~fy~~~kkr~~ 429 (482)
T 2xag_B 388 QLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFN 429 (482)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHSSCCHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHCcCHHHHHHHhCCCCHHHHHHHHHHHHHHhC
Confidence 455667888889999999999999999888775555554444
No 33
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=46.75 E-value=21 Score=16.09 Aligned_cols=29 Identities=17% Similarity=0.323 Sum_probs=25.2
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHhCCC
Q psy18132 30 KTLIRIIVTRSEIDLGDIKQNFLKLYGKT 58 (64)
Q Consensus 30 ~~Li~il~~rs~~~l~~i~~~Y~~~~g~~ 58 (64)
+.+++-+.+-+=-++.++-...++.||.+
T Consensus 4 ~~iie~i~~lTvlE~~eLvk~leekfGVs 32 (40)
T 1dd4_C 4 DEIIEAIEKLTVSELAELVKKLEDKFGVT 32 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHCCC
Confidence 45678888888999999999999999986
No 34
>3frr_A Uncharacterized protein KIAA0174; ESCRT, ESCRT-III, CHMP, IST1, alternative splicing, phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3frs_A
Probab=46.43 E-value=13 Score=22.24 Aligned_cols=21 Identities=14% Similarity=0.240 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHhCCCHHHh
Q psy18132 42 IDLGDIKQNFLKLYGKTLEEY 62 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~L~~~ 62 (64)
++|..|++.|..+||++....
T Consensus 117 pEL~~ir~~l~~KyGkeF~~~ 137 (191)
T 3frr_A 117 AELKIVADQLCAKYSKEYGKL 137 (191)
T ss_dssp HHHHHHHHHHHHHHCHHHHHH
T ss_pred hHHHHHHHHHHHHhCHHHHHH
Confidence 799999999999999988754
No 35
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=43.42 E-value=22 Score=22.02 Aligned_cols=36 Identities=17% Similarity=0.284 Sum_probs=24.8
Q ss_pred CCCHHHHHHHHHhCCHHHHHHHHHHHHHHhC------CCHHHhh
Q psy18132 26 GTDDKTLIRIIVTRSEIDLGDIKQNFLKLYG------KTLEEYI 63 (64)
Q Consensus 26 gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g------~~L~~~I 63 (64)
|.+...+-+. ..++.++..++++|+..|. .+|++++
T Consensus 220 ~~n~~g~~r~--~~~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~ 261 (305)
T 3t57_A 220 GLNLEGLRRN--GFTMSEMKSLRAAYRKIFMSTETVSLSFEERL 261 (305)
T ss_dssp EECHHHHHHT--TCCHHHHHHHHHHHHHHHCCTTSSTTCSHHHH
T ss_pred ccchhheeec--CCCHHHHHHHHHHHHHHHhcccccCCCHHHHH
Confidence 3444444442 4588999999999999996 4566543
No 36
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=41.23 E-value=34 Score=20.83 Aligned_cols=25 Identities=20% Similarity=0.194 Sum_probs=20.0
Q ss_pred CCHHHHHHHHHHHHHHh--CCCHHHhh
Q psy18132 39 RSEIDLGDIKQNFLKLY--GKTLEEYI 63 (64)
Q Consensus 39 rs~~~l~~i~~~Y~~~~--g~~L~~~I 63 (64)
-++.++..++++|+..| +.+|++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~l~~~~ 228 (270)
T 1j2z_A 202 LESKDIDFIYALYKRLFRPIPSLRESA 228 (270)
T ss_dssp SCHHHHHHHHHHHHHHTCSSSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 47888999999999988 66677654
No 37
>3t72_q RNA polymerase sigma factor RPOD, DNA-directed RN polymerase subunit beta; winged-helix motif, transcription activation, DNA-binding; 4.33A {Escherichia coli} PDB: 1tlh_B
Probab=41.19 E-value=29 Score=18.26 Aligned_cols=24 Identities=29% Similarity=0.526 Sum_probs=18.4
Q ss_pred HHHHHHHhhCCCCCHHHHHHHHHh
Q psy18132 15 ARRLKDAMAGIGTDDKTLIRIIVT 38 (64)
Q Consensus 15 a~~l~~a~kg~gtde~~Li~il~~ 38 (64)
...|+.-+++.||+|..|.+.+.+
T Consensus 73 ~~~l~~~~~~~~~~~~~~~~~~~~ 96 (99)
T 3t72_q 73 SEVLRSGSSGSGTPEEKLLRAIFG 96 (99)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhc
Confidence 456667788899999888887654
No 38
>4aj5_1 SKA3, spindle and kinetochore-associated protein 3; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=40.02 E-value=19 Score=19.65 Aligned_cols=21 Identities=19% Similarity=0.570 Sum_probs=15.2
Q ss_pred HHHHHhCCHHHHHHHHHHHHH
Q psy18132 33 IRIIVTRSEIDLGDIKQNFLK 53 (64)
Q Consensus 33 i~il~~rs~~~l~~i~~~Y~~ 53 (64)
..++..|+..|+..|++.|++
T Consensus 79 ~kvL~~rns~DI~~ire~fqK 99 (101)
T 4aj5_1 79 TKVLMEKNSMDIMKIREYFQK 99 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHH
Confidence 456667778888888887653
No 39
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=38.99 E-value=63 Score=19.43 Aligned_cols=28 Identities=11% Similarity=0.175 Sum_probs=18.3
Q ss_pred CCHHHHHHHHHhCCHHHHHHHHHHHHHHhCC
Q psy18132 27 TDDKTLIRIIVTRSEIDLGDIKQNFLKLYGK 57 (64)
Q Consensus 27 tde~~Li~il~~rs~~~l~~i~~~Y~~~~g~ 57 (64)
.+...+.+- -++.++..++++|+..|..
T Consensus 197 ~n~~g~~r~---~~~~~~~~l~~~~~~l~~~ 224 (266)
T 3r0s_A 197 LNLVGIRRR---FDKDEVDRLSRAFKTLFRQ 224 (266)
T ss_dssp ECHHHHHHH---SCHHHHHHHHHHHHHHHSS
T ss_pred cchhheeec---CCHHHHHHHHHHHHHHHcc
Confidence 444444443 4677888888888887763
No 40
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica}
Probab=38.79 E-value=78 Score=20.78 Aligned_cols=46 Identities=20% Similarity=0.457 Sum_probs=30.2
Q ss_pred ccCchHHHHHHHHH-HhhCCC-CCH-----------H---HHHHHHHhCCHHHHHHHHHHHHH
Q psy18132 7 VKDKSSYLARRLKD-AMAGIG-TDD-----------K---TLIRIIVTRSEIDLGDIKQNFLK 53 (64)
Q Consensus 7 ~~~~~~~~a~~l~~-a~kg~g-tde-----------~---~Li~il~~rs~~~l~~i~~~Y~~ 53 (64)
+.++++-..+.+.+ |..|.+ ||+ . .+.+++. .+..++.+|.+.|.+
T Consensus 281 L~D~p~~i~kKI~k~A~t~g~~Td~~~~~~~g~p~~~~v~~~~~~~~-~~~~~~eei~~~~~~ 342 (386)
T 3hzr_A 281 LSDNAKQVERKINKLAFSGGRNTTEEHKKLGGQCDIDVSFQLLNIFS-SDNAQVKDVEEKYSK 342 (386)
T ss_dssp TTCCHHHHHHHHHHTSCCCCCSSHHHHHTTCCCGGGCHHHHHHHHHC-SCHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHhccCCCCCCcccccccCCCCccchHHHHHHHHc-CChhhHHHHHHHHHc
Confidence 44667777888888 766543 432 1 3445555 577889999998873
No 41
>2o8i_A AGR_C_4230P, hypothetical protein ATU2327; agrobacterium tumefaciens STR. C58, structural GENO PSI-2, protein structure initiative; 2.60A {Agrobacterium tumefaciens str} SCOP: a.288.1.1
Probab=38.67 E-value=24 Score=20.41 Aligned_cols=18 Identities=6% Similarity=0.327 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHhCCCH
Q psy18132 42 IDLGDIKQNFLKLYGKTL 59 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~L 59 (64)
..+..++.+|+++||-..
T Consensus 98 ~~l~~lN~~Ye~kFGfpF 115 (165)
T 2o8i_A 98 ARFTQLNSAYTEKFGFPF 115 (165)
T ss_dssp HHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHHcCCee
Confidence 458889999999999653
No 42
>2o70_A OHCU decarboxylase; URIC acid, decarboxylation, 5-hydroxyisourate, allantoin, lyase; 1.80A {Danio rerio} SCOP: a.288.1.1 PDB: 2o73_A* 2o74_A*
Probab=38.44 E-value=24 Score=20.58 Aligned_cols=18 Identities=6% Similarity=0.357 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHhCCCH
Q psy18132 42 IDLGDIKQNFLKLYGKTL 59 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~L 59 (64)
..+..++.+|+++||...
T Consensus 102 ~~l~~lN~~Y~~kFGfpF 119 (174)
T 2o70_A 102 VHMYRLNSEYKERFGFPF 119 (174)
T ss_dssp HHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHHCCCeE
Confidence 458889999999999753
No 43
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=38.38 E-value=33 Score=16.08 Aligned_cols=37 Identities=24% Similarity=0.322 Sum_probs=23.1
Q ss_pred HHHHHHhhCCCCCHHHHHHH-HH-hCCHHHHHHHHHHHHHHh
Q psy18132 16 RRLKDAMAGIGTDDKTLIRI-IV-TRSEIDLGDIKQNFLKLY 55 (64)
Q Consensus 16 ~~l~~a~kg~gtde~~Li~i-l~-~rs~~~l~~i~~~Y~~~~ 55 (64)
..|.++++..|.+.+..|.- +- +|++.|. ++.|...|
T Consensus 18 ~~L~~~v~~~G~~~W~~IA~~~~~~Rt~~qc---r~r~~~~~ 56 (58)
T 2elk_A 18 LLLIDACETLGLGNWADIADYVGNARTKEEC---RDHYLKTY 56 (58)
T ss_dssp HHHHHHHHHTTTTCHHHHHHHHCSSCCHHHH---HHHHHHHT
T ss_pred HHHHHHHHHHCcCCHHHHHHHHCCCCCHHHH---HHHHHHHc
Confidence 35778888888555555544 55 6998775 34454443
No 44
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=43.69 E-value=7 Score=19.98 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=22.5
Q ss_pred HHHHHhhCCCCCHHHHHHH---HHhCCHHHHHHHHHHHHHHhCC
Q psy18132 17 RLKDAMAGIGTDDKTLIRI---IVTRSEIDLGDIKQNFLKLYGK 57 (64)
Q Consensus 17 ~l~~a~kg~gtde~~Li~i---l~~rs~~~l~~i~~~Y~~~~g~ 57 (64)
.|-.+++..|..++.+.-| | +||+.|+..=++.--++|.+
T Consensus 24 ~IL~~cq~~G~s~~tfa~iA~~L-nks~~QV~~RF~~Lm~Lf~k 66 (70)
T 2lr8_A 24 VILLECQKRGPSSKTFAYLAAKL-DKNPNQVSERFQQLMKLFEK 66 (70)
Confidence 3456777777755554433 4 78887765444443344443
No 45
>1go3_F DNA-directed RNA polymerase subunit F; transferase, transferase, transcription; 1.75A {Methanococcus jannaschii} SCOP: a.60.8.2
Probab=37.03 E-value=50 Score=17.71 Aligned_cols=36 Identities=31% Similarity=0.470 Sum_probs=26.1
Q ss_pred HHHHHHHHhhCCCCCHHHHHHH--HHhCCHHHHHHHHH
Q psy18132 14 LARRLKDAMAGIGTDDKTLIRI--IVTRSEIDLGDIKQ 49 (64)
Q Consensus 14 ~a~~l~~a~kg~gtde~~Li~i--l~~rs~~~l~~i~~ 49 (64)
.|..+.+-+.+.|-++...+.| ||..+..++..|-.
T Consensus 51 ~a~~l~e~L~~~~l~e~~a~~I~nl~P~t~dElraii~ 88 (107)
T 1go3_F 51 EAKKLVEELISLGIDEKTAVKIADILPEDLDDLRAIYY 88 (107)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHCCCSHHHHHHHST
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHhCCCCHHHHHHHHh
Confidence 5777777777778888887777 66677777776644
No 46
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=36.35 E-value=22 Score=18.36 Aligned_cols=22 Identities=5% Similarity=0.093 Sum_probs=9.2
Q ss_pred HHHHHHhCCHHHHHHHHHHHHH
Q psy18132 32 LIRIIVTRSEIDLGDIKQNFLK 53 (64)
Q Consensus 32 Li~il~~rs~~~l~~i~~~Y~~ 53 (64)
+.+||.-.......+|+.+|.+
T Consensus 18 ~y~vLgv~~~as~~eIKkaYrk 39 (88)
T 1iur_A 18 VTSVVEQAWKLPESERKKIIRR 39 (88)
T ss_dssp HHHHHHHTTSSCSHHHHHHHHH
T ss_pred HHHHhCCCCCCCHHHHHHHHHH
Confidence 3344433333344444444444
No 47
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=35.86 E-value=28 Score=20.55 Aligned_cols=18 Identities=17% Similarity=0.305 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHhCCCH
Q psy18132 42 IDLGDIKQNFLKLYGKTL 59 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~L 59 (64)
..+..++.+|+++||-..
T Consensus 114 ~~L~~LN~~Ye~kFGfpF 131 (181)
T 2q37_A 114 QELAEWNVLYKKKFGFIF 131 (181)
T ss_dssp HHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHHcCCeE
Confidence 358889999999999653
No 48
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=35.06 E-value=27 Score=15.78 Aligned_cols=30 Identities=23% Similarity=0.401 Sum_probs=18.7
Q ss_pred HHHHHHhhCCCCCHHH-HHHHHHhCCHHHHH
Q psy18132 16 RRLKDAMAGIGTDDKT-LIRIIVTRSEIDLG 45 (64)
Q Consensus 16 ~~l~~a~kg~gtde~~-Li~il~~rs~~~l~ 45 (64)
..|.++++..|..... +...+-+|++.+..
T Consensus 12 ~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr 42 (52)
T 1guu_A 12 EKLKKLVEQNGTDDWKVIANYLPNRTDVQCQ 42 (52)
T ss_dssp HHHHHHHHHHCSSCHHHHHHTSTTCCHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHcCCCCHHHHH
Confidence 3466777777874444 44445689987653
No 49
>3o7i_A OHCU decarboxylase; lyase; 1.50A {Klebsiella pneumoniae subsp} PDB: 3o7h_A 3o7j_A* 3o7k_A
Probab=34.28 E-value=31 Score=20.55 Aligned_cols=17 Identities=12% Similarity=0.276 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHhCCC
Q psy18132 42 IDLGDIKQNFLKLYGKT 58 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~ 58 (64)
..+..+..+|+++||-.
T Consensus 123 ~~L~~LN~~Ye~kFGfp 139 (189)
T 3o7i_A 123 QALREGNARYEARFGRV 139 (189)
T ss_dssp HHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHCCCc
Confidence 45889999999999865
No 50
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=32.80 E-value=60 Score=19.41 Aligned_cols=24 Identities=13% Similarity=0.268 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHHHHHhCC--CHHHhh
Q psy18132 40 SEIDLGDIKQNFLKLYGK--TLEEYI 63 (64)
Q Consensus 40 s~~~l~~i~~~Y~~~~g~--~L~~~I 63 (64)
++.++..++++|+..|.. +|++++
T Consensus 210 ~~~~~~~l~~~~~~~~~~~~~~~~~~ 235 (265)
T 4e6u_A 210 SKNTIQGLREAYKLIFKSGLTSVQAI 235 (265)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 688899999999998865 465543
No 51
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=32.34 E-value=41 Score=15.30 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=19.3
Q ss_pred HHHHHHhhCCCCCHHHHHHH-HH--hCCHHHHHH
Q psy18132 16 RRLKDAMAGIGTDDKTLIRI-IV--TRSEIDLGD 46 (64)
Q Consensus 16 ~~l~~a~kg~gtde~~Li~i-l~--~rs~~~l~~ 46 (64)
..|.++++..|++....|.- +. +|++.++..
T Consensus 11 ~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~ 44 (53)
T 1w0t_A 11 KNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKD 44 (53)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHH
T ss_pred HHHHHHHHHHCcCCHHHHHHHcCCCCCCHHHHHH
Confidence 34667777778655555544 44 599887643
No 52
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=31.96 E-value=34 Score=14.34 Aligned_cols=28 Identities=14% Similarity=0.280 Sum_probs=22.9
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHhC
Q psy18132 29 DKTLIRIIVTRSEIDLGDIKQNFLKLYG 56 (64)
Q Consensus 29 e~~Li~il~~rs~~~l~~i~~~Y~~~~g 56 (64)
...+++-+.+-|--++..+-.+.+..||
T Consensus 3 ~~~iie~i~~lTvlEl~eLvk~lEe~fG 30 (30)
T 1zav_U 3 IDEIIEAIEKLTVSELAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHSBHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHhC
Confidence 3557788888888899999999888887
No 53
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=31.55 E-value=28 Score=16.88 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=20.9
Q ss_pred HHHHHHHhhCCCCCHHHHHHHH---HhCCHHHHH
Q psy18132 15 ARRLKDAMAGIGTDDKTLIRII---VTRSEIDLG 45 (64)
Q Consensus 15 a~~l~~a~kg~gtde~~Li~il---~~rs~~~l~ 45 (64)
=+.|.++++..|+..+..|.-. .+|++.|+.
T Consensus 19 D~~L~~~V~~~G~~~W~~Ia~~~~~~~Rt~~qcr 52 (64)
T 3sjm_A 19 SEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIK 52 (64)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHH
T ss_pred HHHHHHHHHccCCCchHHHHhhcCCCCCCHHHHH
Confidence 3567778888887666666542 379988853
No 54
>1r4t_A Exoenzyme S; EXOS, GAP, toxin, virulence factor, signal transduction; NMR {Pseudomonas aeruginosa}
Probab=31.54 E-value=47 Score=19.29 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=27.9
Q ss_pred hhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q psy18132 22 MAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLY 55 (64)
Q Consensus 22 ~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~ 55 (64)
+..|||-.....+.+.+-|+.++.++...-+...
T Consensus 89 fqQWGT~GG~~~~~v~~AS~e~L~ea~~~lh~vm 122 (153)
T 1r4t_A 89 LQQWGTTGGAASQLVLDASPELRREITDQLHQVM 122 (153)
T ss_dssp GGGTTSSSSHHHHHHHHCSHHHHHHHHHHHHHHH
T ss_pred HHHhhccccHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 4668999999999999999999998887655543
No 55
>2kwp_A Transcription elongation protein NUSA; NMR {Escherichia coli}
Probab=31.24 E-value=70 Score=17.68 Aligned_cols=29 Identities=7% Similarity=0.094 Sum_probs=22.9
Q ss_pred hCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCC
Q psy18132 23 AGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKT 58 (64)
Q Consensus 23 kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~ 58 (64)
+--|.+...+++.|- .++..+|++.||.+
T Consensus 14 ~EKgI~~e~v~eaie-------~AL~~A~kk~~g~~ 42 (129)
T 2kwp_A 14 NEKALPREKIFEALE-------SALATATKKKYEQE 42 (129)
T ss_dssp HHHCCCHHHHHHHHH-------HHHHHHHHHHHCSC
T ss_pred HHhCcCHHHHHHHHH-------HHHHHHHHHhcCCc
Confidence 445788899988776 47889999999853
No 56
>3ggy_A Increased sodium tolerance protein 1; ESCRT-III like, phosphoprotein, protein transport, endocytosis; 1.70A {Saccharomyces cerevisiae} PDB: 3ggz_A
Probab=31.12 E-value=17 Score=21.77 Aligned_cols=21 Identities=10% Similarity=-0.005 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHhCCCHHHh
Q psy18132 42 IDLGDIKQNFLKLYGKTLEEY 62 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~L~~~ 62 (64)
++|..|++.|..+||++....
T Consensus 123 pEL~~ir~~l~~KyGkeF~~~ 143 (193)
T 3ggy_A 123 KELSQLKDLMAWKINVEFVNG 143 (193)
T ss_dssp TTHHHHHHHHHHHTCHHHHHH
T ss_pred hHHHHHHHHHHHHhCHHHHHH
Confidence 889999999999999987653
No 57
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=30.55 E-value=48 Score=15.55 Aligned_cols=37 Identities=14% Similarity=0.328 Sum_probs=23.9
Q ss_pred HHHHHHhhCCCCCHHH-HHHHHHhCCHHHHHHHHHHHHHHh
Q psy18132 16 RRLKDAMAGIGTDDKT-LIRIIVTRSEIDLGDIKQNFLKLY 55 (64)
Q Consensus 16 ~~l~~a~kg~gtde~~-Li~il~~rs~~~l~~i~~~Y~~~~ 55 (64)
..|.++++..|.+.+. +...+-+|++.|. ++.|...+
T Consensus 17 ~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qc---r~r~~~~l 54 (60)
T 1x41_A 17 MALLEAVMDCGFGNWQDVANQMCTKTKEEC---EKHYMKYF 54 (60)
T ss_dssp HHHHHHHHHTCTTCHHHHHHHHTTSCHHHH---HHHHHHHT
T ss_pred HHHHHHHHHHCcCcHHHHHHHhCCCCHHHH---HHHHHHHc
Confidence 4577888888965544 5555667998764 45555443
No 58
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=30.40 E-value=47 Score=15.43 Aligned_cols=36 Identities=14% Similarity=0.346 Sum_probs=22.7
Q ss_pred HHHHHHhhCCCCCHHHHHH-HHHhCCHHHHHHHHHHHHHH
Q psy18132 16 RRLKDAMAGIGTDDKTLIR-IIVTRSEIDLGDIKQNFLKL 54 (64)
Q Consensus 16 ~~l~~a~kg~gtde~~Li~-il~~rs~~~l~~i~~~Y~~~ 54 (64)
..|.++++..|++.+..|. .+-+|++.+. ++.|...
T Consensus 17 ~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qc---r~Rw~~~ 53 (60)
T 2d9a_A 17 EQLRALVRQFGQQDWKFLASHFPNRTDQQC---QYRWLRV 53 (60)
T ss_dssp HHHHHHHHHTCTTCHHHHHHHCSSSCHHHH---HHHHHHT
T ss_pred HHHHHHHHHhCCCCHHHHHHHccCCCHHHH---HHHHHHH
Confidence 4577788888875555444 4557998764 4555443
No 59
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=29.92 E-value=67 Score=17.20 Aligned_cols=21 Identities=24% Similarity=0.400 Sum_probs=17.2
Q ss_pred hCCHHHHHHHHHHHHHHhCCC
Q psy18132 38 TRSEIDLGDIKQNFLKLYGKT 58 (64)
Q Consensus 38 ~rs~~~l~~i~~~Y~~~~g~~ 58 (64)
.+++.++....+.|+..||++
T Consensus 15 ~~~~~~~~~~F~~wk~~~~K~ 35 (106)
T 3f75_P 15 EWKEAHFQDAFSSFQAMYAKS 35 (106)
T ss_dssp -CCHHHHHHHHHHHHHHHTCC
T ss_pred ccCcHHHHHHHHHHHHHhCCc
Confidence 367888888899999999876
No 60
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=29.41 E-value=49 Score=21.53 Aligned_cols=20 Identities=15% Similarity=0.076 Sum_probs=17.7
Q ss_pred CCHHHHHHHHHHHHHHhCCC
Q psy18132 39 RSEIDLGDIKQNFLKLYGKT 58 (64)
Q Consensus 39 rs~~~l~~i~~~Y~~~~g~~ 58 (64)
.|+..|..+.+.|+..|+|+
T Consensus 57 ~s~~~~~~lf~~f~~~~~K~ 76 (363)
T 3tnx_A 57 TSTERLIQLFESWMLKHNKI 76 (363)
T ss_dssp SCHHHHHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHHHHHcCCc
Confidence 57888999999999999975
No 61
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=28.79 E-value=57 Score=15.85 Aligned_cols=37 Identities=11% Similarity=0.318 Sum_probs=26.7
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHH
Q psy18132 16 RRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFL 52 (64)
Q Consensus 16 ~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~ 52 (64)
..|.++++..|.+=..+...+-+|+..++..=-..|.
T Consensus 18 ~~l~~~~~~~G~~W~~Ia~~~~~Rt~~q~k~r~~~~l 54 (72)
T 2cu7_A 18 ELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYF 54 (72)
T ss_dssp HHHHHHHHHTCSCHHHHHHHHSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 4567788888987777777788899987665444443
No 62
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=28.04 E-value=65 Score=16.24 Aligned_cols=36 Identities=19% Similarity=0.170 Sum_probs=23.9
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy18132 16 RRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKL 54 (64)
Q Consensus 16 ~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~ 54 (64)
..|.++++..|.+=..+-+.+-+|+..|.. +.|...
T Consensus 27 ~~Ll~~v~~~G~~W~~IA~~v~~RT~~qcr---~r~~~~ 62 (79)
T 2yus_A 27 LLLLEALEMYKDDWNKVSEHVGSRTQDECI---LHFLRL 62 (79)
T ss_dssp HHHHHHHHHSSSCHHHHHHHHSSCCHHHHH---HHHTTS
T ss_pred HHHHHHHHHhCCCHHHHHHHcCCCCHHHHH---HHHHHh
Confidence 566778888885555555666689987754 455544
No 63
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=27.98 E-value=64 Score=16.14 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=21.8
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHH
Q psy18132 16 RRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLK 53 (64)
Q Consensus 16 ~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~ 53 (64)
+.|.++.+..|..=..+...+ +|++.+ |++.|..
T Consensus 32 ~~L~~l~~~~G~kW~~IA~~l-gRt~~q---~knRw~~ 65 (73)
T 2llk_A 32 EKLKELRIKHGNDWATIGAAL-GRSASS---VKDRCRL 65 (73)
T ss_dssp HHHHHHHHHHSSCHHHHHHHH-TSCHHH---HHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHh-CCCHHH---HHHHHHH
Confidence 456667777787755555566 999875 4455543
No 64
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=27.97 E-value=56 Score=15.70 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=20.0
Q ss_pred HHHHHHhhCCCCCHHHHHHH-HH--hCCHHHHHH
Q psy18132 16 RRLKDAMAGIGTDDKTLIRI-IV--TRSEIDLGD 46 (64)
Q Consensus 16 ~~l~~a~kg~gtde~~Li~i-l~--~rs~~~l~~ 46 (64)
..|.++++..|+..+..|.- +- +|+..|+..
T Consensus 19 ~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~ 52 (69)
T 1ity_A 19 KNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKD 52 (69)
T ss_dssp HHHHHHHHHHCSSCHHHHHHHSCCSSCCHHHHHH
T ss_pred HHHHHHHHHHCCCcHHHHHHHcCcCCCCHHHHHH
Confidence 45667777778756655554 44 699886643
No 65
>1mty_G Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.23.3.1 PDB: 1mmo_G 1xmg_E 1xmf_E 1xmh_E 1xvb_E 1fyz_E 1fz0_E 1fz2_E 1fz3_E 1fz4_E 1fz5_E 1fz6_E 1fz7_E 1fz8_E 1fz9_E 1fzh_E 1fzi_E 1xu3_E 1xu5_E 1fz1_E ...
Probab=27.68 E-value=96 Score=18.12 Aligned_cols=43 Identities=16% Similarity=0.228 Sum_probs=28.2
Q ss_pred HHHHHHHHhhCCCCCHH-----HHHHHHHhCCHHHHHHHHHHHHHHhCCC
Q psy18132 14 LARRLKDAMAGIGTDDK-----TLIRIIVTRSEIDLGDIKQNFLKLYGKT 58 (64)
Q Consensus 14 ~a~~l~~a~kg~gtde~-----~Li~il~~rs~~~l~~i~~~Y~~~~g~~ 58 (64)
+++.+.++.. |.|-. ++-.+=..-+..+++.|.-.|.+.|+-+
T Consensus 71 d~~ll~k~~~--G~da~~V~~~~~ak~~a~~d~yEaErI~i~FR~~~KPP 118 (162)
T 1mty_G 71 EVDFRHKTAF--GEDAKSVLDGTVAKMNAAKDKWEAEKIHIGFRQAYKPP 118 (162)
T ss_dssp HHHHHHBCTT--SCBHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHhccc--CcCHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhcCCC
Confidence 5556666654 44443 3334444468889999999999988654
No 66
>1mhy_G Methane monooxygenase hydroxylase; oxidoreductase, NADP, one-carbon metabolism; 2.00A {Methylosinus trichosporium} SCOP: a.23.3.1 PDB: 1mhz_G
Probab=27.60 E-value=90 Score=18.37 Aligned_cols=43 Identities=23% Similarity=0.403 Sum_probs=27.8
Q ss_pred HHHHHHHHhhCCCCCHHH-----HHHHHHhCCHHHHHHHHHHHHHHhCCC
Q psy18132 14 LARRLKDAMAGIGTDDKT-----LIRIIVTRSEIDLGDIKQNFLKLYGKT 58 (64)
Q Consensus 14 ~a~~l~~a~kg~gtde~~-----Li~il~~rs~~~l~~i~~~Y~~~~g~~ 58 (64)
+++.+.++.. |.|-.. +-.+=..-+..+++.|.-.|.+.|+-+
T Consensus 75 d~~ll~k~~~--G~da~~V~~~~~ak~~a~~d~yEaErI~i~FR~~~KPP 122 (169)
T 1mhy_G 75 VADLITKATT--GEDAAAVEATWIAKIKAAKSKYEAEAIHIEFRQLYKPP 122 (169)
T ss_dssp HHHHHHBCTT--SCBHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHhccc--CcCHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhcCCC
Confidence 5555666554 444333 333333467889999999999988654
No 67
>2npt_A Dual specificity mitogen-activated protein kinase; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_A 1wi0_A
Probab=27.08 E-value=66 Score=17.40 Aligned_cols=19 Identities=11% Similarity=0.230 Sum_probs=15.9
Q ss_pred HhCCHHHHHHHHHHHHHHh
Q psy18132 37 VTRSEIDLGDIKQNFLKLY 55 (64)
Q Consensus 37 ~~rs~~~l~~i~~~Y~~~~ 55 (64)
+-||..+|++..+.|...+
T Consensus 69 TVRSDeE~kAMlsyy~~~~ 87 (106)
T 2npt_A 69 TVRSDEEMKAMLSYYYSTV 87 (106)
T ss_dssp EECSHHHHHHHHHHHHHHH
T ss_pred EEcchHHHHHHHHHHHHHH
Confidence 4599999999999988654
No 68
>3rmr_A ATR1, avirulence protein; effector, RPP1-recognized, alpha-helical, W-motif, seahorse, RPP1, R-protein, protein binding; 2.30A {Hyaloperonospora parasitica}
Probab=26.76 E-value=63 Score=19.59 Aligned_cols=24 Identities=29% Similarity=0.448 Sum_probs=16.9
Q ss_pred cCchHHHHHHHHHHhhCCCCCHHHH
Q psy18132 8 KDKSSYLARRLKDAMAGIGTDDKTL 32 (64)
Q Consensus 8 ~~~~~~~a~~l~~a~kg~gtde~~L 32 (64)
.||..||...|| ||...|.|-..|
T Consensus 174 snpsryfsavlh-amekp~ad~r~l 197 (260)
T 3rmr_A 174 SNPSRYFSAVLH-AMEKPDADSRVL 197 (260)
T ss_dssp TCHHHHHHHHHH-HHHSTTCCHHHH
T ss_pred CChhHHHHHHHH-HHhCCCchHHHh
Confidence 368888877765 677778776554
No 69
>3kj0_B BCL-2-like protein 11; BH3, apoptosis, protein-peptide complex, alternative splicing, cytoplasm, developmental protein, differentiation; 1.70A {Homo sapiens} PDB: 2pqk_B
Probab=26.31 E-value=43 Score=13.67 Aligned_cols=15 Identities=27% Similarity=0.448 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHhC
Q psy18132 42 IDLGDIKQNFLKLYG 56 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g 56 (64)
.+++.|-+.|...|-
T Consensus 12 qELRRIGDeFN~~y~ 26 (27)
T 3kj0_B 12 QELRRIGDEFNAYYA 26 (27)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhcc
Confidence 678888888888774
No 70
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=25.96 E-value=95 Score=18.47 Aligned_cols=24 Identities=17% Similarity=0.176 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHHHHhCCC--HHHhh
Q psy18132 40 SEIDLGDIKQNFLKLYGKT--LEEYI 63 (64)
Q Consensus 40 s~~~l~~i~~~Y~~~~g~~--L~~~I 63 (64)
++.++..++++|+..|... +.+++
T Consensus 203 ~~~~~~~l~~~~~~~~~~~~~~~~~~ 228 (259)
T 3hsq_A 203 SPEVRNAIKHAYKVIYHSGISTRKAL 228 (259)
T ss_dssp CHHHHHHHHHHHHHHHSSSSCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 6888999999999998654 55543
No 71
>2z16_A Matrix protein 1, M1; AIV-7M1, H5N1, structural genomics; 2.02A {Influenza a virus} PDB: 3md2_A 1ea3_A 1aa7_A
Probab=24.79 E-value=1.1e+02 Score=17.77 Aligned_cols=40 Identities=30% Similarity=0.395 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHhhCCCCCHHHHHHHHHhC---CHHHHHHHHHH
Q psy18132 11 SSYLARRLKDAMAGIGTDDKTLIRIIVTR---SEIDLGDIKQN 50 (64)
Q Consensus 11 ~~~~a~~l~~a~kg~gtde~~Li~il~~r---s~~~l~~i~~~ 50 (64)
....|+.|+.-+.|..||-++|.+-|-+| |+-+-.-|-..
T Consensus 28 kaeia~~l~~~f~gkntDLealmEWlk~r~~ls~l~k~ilg~~ 70 (165)
T 2z16_A 28 KAEIAQKLEDVFAGKNTDLEALMEWLKTRPILSPLTKGILGFV 70 (165)
T ss_dssp HHHHHHHHHHHHHTSCCCHHHHHHHHHHCSSCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHcccccCHHHHHHHHhcCcccchHHhhhhheE
Confidence 34568999999999999999999998886 44444434333
No 72
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=24.57 E-value=1e+02 Score=18.70 Aligned_cols=25 Identities=24% Similarity=0.313 Sum_probs=18.7
Q ss_pred CCHHHHHHHHHHHHHHhCC--CHHHhh
Q psy18132 39 RSEIDLGDIKQNFLKLYGK--TLEEYI 63 (64)
Q Consensus 39 rs~~~l~~i~~~Y~~~~g~--~L~~~I 63 (64)
-++.++..++++|+..|.. +|++++
T Consensus 224 ~~~~~~~~l~~~~~~~~~~~~~~~~~~ 250 (283)
T 4eqy_A 224 FSPDAISALRSAYRILYKNSLSLEEAK 250 (283)
T ss_dssp CCHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 3678899999999998865 455543
No 73
>3a4r_A Nfatc2-interacting protein; ubiquitin fold, coiled coil, cytoplasm, methylation, nucleus, transcription; 1.00A {Mus musculus} PDB: 3a4s_C 3rd2_A
Probab=24.52 E-value=63 Score=15.94 Aligned_cols=18 Identities=11% Similarity=0.076 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHhCCCH
Q psy18132 42 IDLGDIKQNFLKLYGKTL 59 (64)
Q Consensus 42 ~~l~~i~~~Y~~~~g~~L 59 (64)
.-+..|+++|.+..|.+.
T Consensus 29 t~l~kl~~~y~~~~gi~~ 46 (79)
T 3a4r_A 29 SPLKVLMSHYEEAMGLSG 46 (79)
T ss_dssp SCHHHHHHHHHHHHTCTT
T ss_pred ChHHHHHHHHHHHhCCCc
Confidence 458899999999988765
No 74
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=24.25 E-value=84 Score=16.90 Aligned_cols=45 Identities=11% Similarity=0.124 Sum_probs=26.8
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHH
Q psy18132 16 RRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKTLE 60 (64)
Q Consensus 16 ~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~L~ 60 (64)
..|.++++..|.+=..+...+-+|++.++..=-..+.+..|.+..
T Consensus 71 ~~L~~~v~~~G~~W~~Ia~~l~gRt~~~~k~rw~~l~~k~~~p~~ 115 (126)
T 3osg_A 71 ALLVQKIQEYGRQWAIIAKFFPGRTDIHIKNRWVTISNKLGIPQT 115 (126)
T ss_dssp HHHHHHHHHHCSCHHHHHTTSTTCCHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHHHhcCCCCC
Confidence 345566666676655555556689988876555555556665543
No 75
>1he1_A Exoenzyme S, EXOS; signaling protein, signalling complex, EXOS, RAC, pseudomonas aeruginosa, GAP, virulence factor; HET: GDP; 2.0A {Pseudomonas aeruginosa} SCOP: a.24.11.1 PDB: 1he9_A
Probab=23.50 E-value=44 Score=19.07 Aligned_cols=34 Identities=12% Similarity=0.150 Sum_probs=27.9
Q ss_pred hCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Q psy18132 23 AGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYG 56 (64)
Q Consensus 23 kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g 56 (64)
..|||-.....+.+.+-|+.++.++...-+...+
T Consensus 88 qQWGT~GG~~~~~v~~As~e~L~ea~~~lh~vm~ 121 (135)
T 1he1_A 88 QQWGTTGGAASQLVLDASPELRREITDQLHQVMS 121 (135)
T ss_dssp HHHTCSSSHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHhhccccHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 4578888899999999999999998887666543
No 76
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.23 E-value=72 Score=15.11 Aligned_cols=29 Identities=17% Similarity=0.123 Sum_probs=19.2
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHhCCHHHHH
Q psy18132 16 RRLKDAMAGIGTDDKTLIRIIVTRSEIDLG 45 (64)
Q Consensus 16 ~~l~~a~kg~gtde~~Li~il~~rs~~~l~ 45 (64)
..|.++.+..|.+=..+.. +.+|+..+..
T Consensus 18 ~~L~~~~~~~g~~W~~Ia~-~~gRt~~qcr 46 (66)
T 2din_A 18 EKLLHLAKLMPTQWRTIAP-IIGRTAAQCL 46 (66)
T ss_dssp HHHHHHHHHCTTCHHHHHH-HHSSCHHHHH
T ss_pred HHHHHHHHHcCCCHHHHhc-ccCcCHHHHH
Confidence 4556667777875444444 8889987654
No 77
>1g8e_A Flagellar transcriptional activator FLHD; genetic regulator, DNA binding protein; 1.80A {Escherichia coli} SCOP: a.145.1.1 PDB: 2avu_A
Probab=22.82 E-value=78 Score=17.54 Aligned_cols=29 Identities=10% Similarity=0.220 Sum_probs=23.5
Q ss_pred HHhhCCCCCHHHHHHHHHhCCHHHHHHHHH
Q psy18132 20 DAMAGIGTDDKTLIRIIVTRSEIDLGDIKQ 49 (64)
Q Consensus 20 ~a~kg~gtde~~Li~il~~rs~~~l~~i~~ 49 (64)
.||-..|.+++. .++|.+-++.|+.++.+
T Consensus 31 ~A~fRLGis~e~-Ad~L~~Lt~~Ql~kLA~ 59 (116)
T 1g8e_A 31 SAMFRLGINEEM-ATTLAALTLPQMVKLAE 59 (116)
T ss_dssp HHHHHHTCCHHH-HHHHHTCCHHHHHHHHS
T ss_pred HHHHHhCCCHHH-HHHHHhCCHHHHHHHhc
Confidence 577788988887 58888899999988754
No 78
>3f5r_A FACT complex subunit POB3; APC7736, FACT complex (SPT16P-POB3P), saccharomyces cerevisi structural genomics, PSI-2; 1.70A {Saccharomyces cerevisiae}
Probab=22.15 E-value=19 Score=21.71 Aligned_cols=21 Identities=24% Similarity=0.401 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHhCCCHHH
Q psy18132 41 EIDLGDIKQNFLKLYGKTLEE 61 (64)
Q Consensus 41 ~~~l~~i~~~Y~~~~g~~L~~ 61 (64)
+.|...|++.+++.|+.+|++
T Consensus 104 ~~D~~~L~~~fk~~f~i~Le~ 124 (191)
T 3f5r_A 104 QDDYNLIKNDFHRRFNIQVEQ 124 (191)
T ss_dssp GGGHHHHHHHHHHHHCCCCEE
T ss_pred HHHHHHHHHHHHHHcCCCcee
Confidence 457899999999999998864
No 79
>1dul_A Signal recognition particle protein (fifty-four homolog); protein-RNA complex, double helix, tetraloop, internal loop, SRP, ribonucleoprotein; HET: CCC; 1.80A {Escherichia coli} SCOP: a.36.1.1 PDB: 2xkv_C
Probab=22.00 E-value=47 Score=16.60 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=11.5
Q ss_pred HHHHHHHHhhCCCCCHHHHHHHH
Q psy18132 14 LARRLKDAMAGIGTDDKTLIRII 36 (64)
Q Consensus 14 ~a~~l~~a~kg~gtde~~Li~il 36 (64)
.+.+.+.--+|.||...-+.+.|
T Consensus 34 ~~SR~~RIA~GSG~~v~eVn~Ll 56 (69)
T 1dul_A 34 KGSRKRRIAAGSGMQVQDVNRLL 56 (69)
T ss_dssp CHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CHHHHHHHHccCCCCHHHHHHHH
Confidence 34444444556665555544443
No 80
>3r45_C Holliday junction recognition protein; histone fold, centromere, CENP-A, histone chaperone, hjurp; 2.60A {Homo sapiens}
Probab=21.74 E-value=50 Score=17.03 Aligned_cols=18 Identities=28% Similarity=0.470 Sum_probs=5.6
Q ss_pred HHhhCCCCCHHHHHHHHH
Q psy18132 20 DAMAGIGTDDKTLIRIIV 37 (64)
Q Consensus 20 ~a~kg~gtde~~Li~il~ 37 (64)
.||.|.+..|+.|..-|-
T Consensus 7 ~~me~~~~~d~~Ll~kLr 24 (81)
T 3r45_C 7 RAMEGEDVEDDQLLQKLR 24 (81)
T ss_dssp --------CCHHHHHHHH
T ss_pred hhccccccchHHHHHHHH
Confidence 578887766666655443
No 81
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=21.66 E-value=66 Score=22.19 Aligned_cols=42 Identities=19% Similarity=0.365 Sum_probs=31.5
Q ss_pred HHHHHHHhhCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCC
Q psy18132 15 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYGKT 58 (64)
Q Consensus 15 a~~l~~a~kg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~~g~~ 58 (64)
...|+.|+.|.-.++.. +.+..|-+.+...|+..|...||..
T Consensus 8 ~~~~~~~~~~~~~~~~~--~~~~~r~~~~~~~~~~~~~~~y~~~ 49 (644)
T 3czg_A 8 PPALRAAFAGPLDPQHA--EVLLSRYDQHASRLLDALHALYGQR 49 (644)
T ss_dssp HHHHHHHHHTTSCTTTH--HHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cHHHHHHhcCCCCcchh--HHHHHHHHHhHHHHHHHHHHHcCCc
Confidence 34577788875433333 6777888899999999999999865
No 82
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=21.31 E-value=48 Score=14.92 Aligned_cols=30 Identities=17% Similarity=0.186 Sum_probs=18.2
Q ss_pred HHHHHHhhCCCCCHHHHH-HHHHhCCHHHHH
Q psy18132 16 RRLKDAMAGIGTDDKTLI-RIIVTRSEIDLG 45 (64)
Q Consensus 16 ~~l~~a~kg~gtde~~Li-~il~~rs~~~l~ 45 (64)
..|.++++..|......| ..+-+|+..+..
T Consensus 12 ~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr 42 (52)
T 1gvd_A 12 QRLIKLVQKYGPKRWSVIAKHLKGRIGKQCR 42 (52)
T ss_dssp HHHHHHHHHHCTTCHHHHHTTSTTCCHHHHH
T ss_pred HHHHHHHHHHCcChHHHHHHHcCCCCHHHHH
Confidence 456667777777544444 445579886543
No 83
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.31 E-value=28 Score=17.07 Aligned_cols=13 Identities=15% Similarity=0.166 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHH
Q psy18132 42 IDLGDIKQNFLKL 54 (64)
Q Consensus 42 ~~l~~i~~~Y~~~ 54 (64)
..+..|.++|.-+
T Consensus 47 ~~f~~i~~Ay~~L 59 (78)
T 2ctp_A 47 EAFKAIGTAYAVL 59 (78)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4566677777654
No 84
>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}
Probab=20.97 E-value=38 Score=15.54 Aligned_cols=16 Identities=19% Similarity=0.069 Sum_probs=10.0
Q ss_pred HHHHHHHhCCCHHHhh
Q psy18132 48 KQNFLKLYGKTLEEYI 63 (64)
Q Consensus 48 ~~~Y~~~~g~~L~~~I 63 (64)
...|-..++.+|+.++
T Consensus 24 A~~~Lea~nWDLe~Av 39 (45)
T 3e21_A 24 AITLLEQNNWDLVAAI 39 (45)
T ss_dssp HHHHHHHTTTCHHHHH
T ss_pred HHHHHHHcCCcHHHHH
Confidence 3456666777776665
No 85
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=20.83 E-value=1e+02 Score=18.23 Aligned_cols=24 Identities=33% Similarity=0.527 Sum_probs=15.3
Q ss_pred CCHHHHHHHHHHHHHHh--CCCHHHh
Q psy18132 39 RSEIDLGDIKQNFLKLY--GKTLEEY 62 (64)
Q Consensus 39 rs~~~l~~i~~~Y~~~~--g~~L~~~ 62 (64)
-++.+..+++++|...| +.+|++.
T Consensus 207 ~~~~~~~~l~~~~~~~~~~~~~~~~~ 232 (262)
T 2qia_A 207 FSREAITAIRNAYKLIYRSGKTLDEV 232 (262)
T ss_dssp CCHHHHHHHHHHHHHHHTSCCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 35677777778887766 3445443
No 86
>1wm3_A Ubiquitin-like protein SMT3B; ubiquitin fold, half-open barrel, two helices, protein transport; 1.20A {Homo sapiens} SCOP: d.15.1.1 PDB: 1wm2_A 3uin_B 3uio_B 2ckh_B
Probab=20.48 E-value=65 Score=15.50 Aligned_cols=19 Identities=11% Similarity=0.287 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHhCCCH
Q psy18132 41 EIDLGDIKQNFLKLYGKTL 59 (64)
Q Consensus 41 ~~~l~~i~~~Y~~~~g~~L 59 (64)
..-+..|+++|.+..|.+.
T Consensus 21 ~t~l~kl~~~y~~~~gi~~ 39 (72)
T 1wm3_A 21 HTPLSKLMKAYCERQGLSM 39 (72)
T ss_dssp TSCTHHHHHHHHHHHTCCT
T ss_pred CChHHHHHHHHHHHhCCCc
Confidence 3457889999999988775
Done!