BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1815
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9W420|SPT6H_DROME Transcription elongation factor SPT6 OS=Drosophila melanogaster
GN=Spt6 PE=1 SV=1
Length = 1831
Score = 254 bits (649), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 148/215 (68%), Gaps = 14/215 (6%)
Query: 2 DQGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTEEFEDLDE 61
DQGEV +RPSSK DHLT TWKVADD++QHIDVREEGKEN FSLGRSLWIGTEEFEDLDE
Sbjct: 1356 DQGEVALRPSSKSKDHLTATWKVADDIFQHIDVREEGKENDFSLGRSLWIGTEEFEDLDE 1415
Query: 62 IIARHVSPMAANVRELLSFRYYREEC----GGMRDKAEEVLRQEKRNNPNKIHYFVSLSK 117
IIARH+ PMA REL+ ++YY+ RD E++LR+EK N+P KIHYF + S+
Sbjct: 1416 IIARHIMPMALAARELIQYKYYKPNMVTGDENERDVMEKLLREEKANDPKKIHYFFTASR 1475
Query: 118 NYPGKFLLSYLPASRSRHEFISVTPEGFRFRGQQFDSVNSLFRWFKEHFRDPIPGAGVAV 177
PGKFLLSYLP ++ RHE+++V PEG+RFRGQ FD+VNSL RWFKEH+ DP A
Sbjct: 1476 AMPGKFLLSYLPKTKVRHEYVTVMPEGYRFRGQIFDTVNSLLRWFKEHWLDPTATPASA- 1534
Query: 178 GPGGQTPY---------GGARQTPGGGHLPYHTPG 203
TP + QT G PY G
Sbjct: 1535 SASNLTPLHLMRPPPTISSSSQTSLGPQAPYSVTG 1569
>sp|Q7KZ85|SPT6H_HUMAN Transcription elongation factor SPT6 OS=Homo sapiens GN=SUPT6H PE=1
SV=2
Length = 1726
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 158/236 (66%), Gaps = 3/236 (1%)
Query: 1 MDQGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTEEFEDLD 60
MDQG+VI+RPSSKG +HLTVTWKV+D +YQH+DVREEGKEN+FSLG +LWI +EEFEDLD
Sbjct: 1350 MDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENAFSLGATLWINSEEFEDLD 1409
Query: 61 EIIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYP 120
EI+AR+V PMA+ R+LL+ +YY++ GG R K EE+L + K+ P I YF+ K P
Sbjct: 1410 EIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELP 1469
Query: 121 GKFLLSYLPASRSRHEFISVTPEGFRFRGQQFDSVNSLFRWFKEHFRDPIPGAGVAVGPG 180
GKFLL Y P + R E+++VTPEGFR+RGQ F +VN LFRWFK+H++DP+PG +
Sbjct: 1470 GKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSR 1529
Query: 181 GQTPYGGARQTPGGGHLPYHTPGMTPHHRGMPTPLGHHSSNMGGPVLMHPPTGTPT 236
+TP TP +L T + + M + + + + G P TP
Sbjct: 1530 TRTP-ASINATPANINLADLTRAVNALPQNMTSQMFSAIAAVTGQ--GQNPNATPA 1582
>sp|Q62383|SPT6H_MOUSE Transcription elongation factor SPT6 OS=Mus musculus GN=Supt6h PE=1
SV=2
Length = 1726
Score = 238 bits (607), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 151/215 (70%), Gaps = 1/215 (0%)
Query: 1 MDQGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTEEFEDLD 60
MDQG+VI+RPSSKG +HLTVTWKV+ +YQH+DVREEGKEN+FSLG +LWI +EEFEDLD
Sbjct: 1350 MDQGDVIIRPSSKGENHLTVTWKVSAGIYQHVDVREEGKENAFSLGATLWINSEEFEDLD 1409
Query: 61 EIIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYP 120
EI+AR+V PMA+ R+LL+ +YY++ GG R K EE+L + K+ P I YF+ K P
Sbjct: 1410 EIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELP 1469
Query: 121 GKFLLSYLPASRSRHEFISVTPEGFRFRGQQFDSVNSLFRWFKEHFRDPIPGAGVAVGPG 180
GKFLL Y P + R E+++VTPEGFR+RGQ F +VN LFRWFK+H++DP+PG +
Sbjct: 1470 GKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSNR 1529
Query: 181 GQTPYGGARQTPGGGHLPYHTPGMTPHHRGMPTPL 215
+TP TP +L T + + M + +
Sbjct: 1530 TRTP-ASINATPANINLADLTRAVNALPQNMTSQM 1563
>sp|Q8UVK2|SPT6H_DANRE Transcription elongation factor SPT6 OS=Danio rerio GN=supt6h PE=1
SV=1
Length = 1726
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 154/224 (68%), Gaps = 2/224 (0%)
Query: 1 MDQGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTEEFEDLD 60
MDQG+V++RPSSKG +HLTVTWKVAD +YQH+DVREEGKEN+FSLG +LWI TEEFEDLD
Sbjct: 1341 MDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAFSLGHTLWINTEEFEDLD 1400
Query: 61 EIIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYP 120
EI AR+V PMAA R+LL +Y+ E GG R K EE+L + K+ P I Y++S ++ P
Sbjct: 1401 EITARYVQPMAAFARDLLGHKYFHECNGGDRKKMEELLVRTKKEKPTFIPYYISACRDLP 1460
Query: 121 GKFLLSYLPASRSRHEFISVTPEGFRFRGQQFDSVNSLFRWFKEHFRDPIPGAGVAVGPG 180
GKFLL Y P + R E++++TP+GFR+R Q F +VN LFRWFK+H++DP+PG A
Sbjct: 1461 GKFLLGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRWFKDHYQDPVPGVTPA-SSR 1519
Query: 181 GQTPYGGARQTPGGGHLPYHTPGMTPHHRGMPTPLGHHSSNMGG 224
+TP TP ++ T + R M + + + + + G
Sbjct: 1520 TRTP-ASVNATPANINIADLTRAVNSLPRNMTSQMFNAIAAVTG 1562
>sp|Q93148|SPT6H_CAEBR Suppressor of Ty 6 homolog OS=Caenorhabditis briggsae GN=emb-5 PE=2
SV=2
Length = 1521
Score = 144 bits (363), Expect = 6e-34, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 1 MDQGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTEEFEDLD 60
MD + I+RPS+ L+VTWK+ D +Y + V+E K+ FS+GR+L +G E+FEDLD
Sbjct: 1317 MDWSDCIIRPSANKESGLSVTWKICDRIYHNFFVKESAKDQVFSIGRTLSVGGEDFEDLD 1376
Query: 61 EIIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYP 120
E+IAR V PM E+ + +Y+ + E EKR + Y S S P
Sbjct: 1377 ELIARFVLPMIQISHEITTHKYFFTQGTSEDTDQVETFVHEKRRELGRSPYVFSASYRQP 1436
Query: 121 GKFLLSYL--PASRSRHEFISVTPEGFRFRGQQFDSVNSLFRWFKEHFRDPIPG--AGVA 176
+F +SY+ ++R RHE ++P G RFR Q FDS++ + WFK HF +P PG + ++
Sbjct: 1437 CQFCISYMFDNSNRIRHEHFKISPRGIRFRQQNFDSLDRMMAWFKRHFNEPPPGIRSSLS 1496
Query: 177 VGPGGQT 183
P G+T
Sbjct: 1497 YRPTGRT 1503
>sp|P34703|SPT6H_CAEEL Suppressor of Ty 6 homolog OS=Caenorhabditis elegans GN=emb-5 PE=1
SV=1
Length = 1521
Score = 136 bits (343), Expect = 1e-31, Method: Composition-based stats.
Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Query: 1 MDQGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTEEFEDLD 60
MD E I+RPS+ L+VTWK+ D +Y + V+E K+ FS+GR L +G E+FEDLD
Sbjct: 1318 MDWSECIIRPSANKDSGLSVTWKICDRVYHNFFVKESAKDQVFSIGRQLSVGGEDFEDLD 1377
Query: 61 EIIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYP 120
E+IAR V PM E+ + +Y+ +A E +EK+ + Y S S P
Sbjct: 1378 ELIARFVQPMIQISHEITTHKYFFPNGTCEETEAVEQFVREKKRELGRSPYVFSASYRQP 1437
Query: 121 GKFLLSYL--PASRSRHEFISVTPEGFRFRGQQFDSVNSLFRWFKEHFRDP 169
+F +SY+ R RHE+ + P G RFR Q FD+++ + WFK HF +P
Sbjct: 1438 CQFCISYMFDNTERIRHEYFKIVPHGVRFRHQNFDTLDRMMAWFKRHFHEP 1488
>sp|Q4PI89|SPT6_USTMA Transcription elongation factor SPT6 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=SPT6 PE=3 SV=1
Length = 1723
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 114/241 (47%), Gaps = 30/241 (12%)
Query: 3 QGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWI-GTEEFEDLDE 61
+G V+VRPSSKG DHL VTWKV DD+YQ+IDV E KE+ +SLGR L I G + DLDE
Sbjct: 1381 RGTVVVRPSSKGDDHLAVTWKVDDDVYQNIDVTELDKESEYSLGRVLRIEGMGSYSDLDE 1440
Query: 62 IIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPG 121
+I HV PM V +++ Y+ G + L NP++ Y L+K+ PG
Sbjct: 1441 LIVNHVKPMVHMVEMMMNHEKYK---GADEEDLHRFLTNWSLANPSRSVYAFGLNKDRPG 1497
Query: 122 KFLLSYLPASRSRHEF--ISVTPEGFRFR-GQQFDSVNSLFRWFKEHF------------ 166
F LS+ + + + V P F+ Q V +L FK +
Sbjct: 1498 YFNLSFKANRDAAIQTWPVKVLPNAFKLGPADQLADVAALCNAFKTQYTTQASMARGAKT 1557
Query: 167 -----RDPIPGAGVAVGPGGQTPYGGARQ------TPGGGHLPYHTPGMTPHHRGMPTPL 215
R P PG G A GG+TPYGG R TPG G +T M P P
Sbjct: 1558 PYGGGRTPAPGMGGATPLGGRTPYGGVRNGMAGSATPGQGVAGGYTTPMINVASATPNPY 1617
Query: 216 G 216
G
Sbjct: 1618 G 1618
>sp|Q8NIV6|SPT6_NEUCR Transcription elongation factor spt-6 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=spt-6 PE=3 SV=1
Length = 1402
Score = 123 bits (308), Expect = 1e-27, Method: Composition-based stats.
Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 5/166 (3%)
Query: 4 GEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTEEFEDLDEII 63
GEV++RPSSKG DHL VTWKVAD ++QH+DV E KEN F++GR L +G ++DLDE+I
Sbjct: 1229 GEVVIRPSSKGNDHLAVTWKVADGVFQHVDVLELQKENEFAVGRVLRVGKYTYQDLDELI 1288
Query: 64 ARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPGKF 123
HV MA V EL+ +++ G R++ E+ L NPN+ Y + +PG F
Sbjct: 1289 VDHVKAMAKKVDELMQCDKFQK---GSRNETEKWLTTYMDANPNRSTYAFCIDTKHPGYF 1345
Query: 124 LLSYLPASRSRHEF--ISVTPEGFRFRGQQFDSVNSLFRWFKEHFR 167
L + + SR + V P F Q+ V +L FK ++
Sbjct: 1346 FLCFKASRNSRVNAWPVRVIPHAFELMKSQYPDVRALCNGFKLRYQ 1391
>sp|Q4HYQ4|SPT6_GIBZE Transcription elongation factor SPT6 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SPT6 PE=3
SV=1
Length = 1408
Score = 115 bits (289), Expect = 2e-25, Method: Composition-based stats.
Identities = 67/175 (38%), Positives = 96/175 (54%), Gaps = 8/175 (4%)
Query: 4 GEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTE-EFEDLDEI 62
GEV++RPSSKG DHL VTWKVAD ++QHIDV E KE F++G+ L +G + + DLDE+
Sbjct: 1236 GEVVIRPSSKGNDHLAVTWKVADGVFQHIDVLEMQKETEFAVGKLLRVGGKYTYTDLDEL 1295
Query: 63 IARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPGK 122
I HV MA V EL+ Y+ R + E+ L NPN+ Y + +PG
Sbjct: 1296 IVEHVKAMARKVEELMRHDKYQNRS---RGETEKWLTTYIDANPNRSTYAFCIDTKHPGY 1352
Query: 123 FLLSYLPASRSRHEF---ISVTPEGFRFRGQQFDSVNSLFRWFKEHFRDPIPGAG 174
F L + ASR+ + P+GF +G Q+ + +L FK +++ G
Sbjct: 1353 FWLCF-KASRAAKVIALPVRAIPQGFELKGYQYPDMRALCNGFKLRYQNEFSKMG 1406
>sp|Q4WWH6|SPT6_ASPFU Transcription elongation factor spt6 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=spt6
PE=3 SV=1
Length = 1420
Score = 113 bits (283), Expect = 9e-25, Method: Composition-based stats.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 6/169 (3%)
Query: 3 QGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTE-EFEDLDE 61
+G+V++RPSSKG DHL VTWKVAD ++QHIDV E KEN FS+GR+L +G + DLD+
Sbjct: 1249 RGDVVIRPSSKGPDHLAVTWKVADGIFQHIDVLELDKENEFSVGRTLKVGGRYTYSDLDD 1308
Query: 62 IIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPG 121
+I HV MA V E++ Y+E G +D L + NP + Y + +PG
Sbjct: 1309 LIFNHVKAMAKKVDEMMLHEKYQE---GSKDATYSWLNTYTKANPRRSAYAFCIDPKHPG 1365
Query: 122 KFLLSYLPASRSR-HEF-ISVTPEGFRFRGQQFDSVNSLFRWFKEHFRD 168
F L + ++ H + + V P+G+ + + + +L FK F +
Sbjct: 1366 YFQLCFKAGENAQLHSWPVKVIPQGYELQRNPYPDMRALCNGFKLLFTN 1414
>sp|Q5B7Q7|SPT6_EMENI Transcription elongation factor spt6 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=spt6 PE=3 SV=2
Length = 1417
Score = 113 bits (282), Expect = 1e-24, Method: Composition-based stats.
Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 6/169 (3%)
Query: 3 QGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTE-EFEDLDE 61
+G+V++RPSSKG DHL VTWKVAD ++QHIDV E KEN FS+GR+L +G + DLD+
Sbjct: 1245 RGDVVIRPSSKGPDHLAVTWKVADGIFQHIDVLELDKENEFSVGRTLKVGGRFTYSDLDD 1304
Query: 62 IIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPG 121
+I HV MA V E++ Y+E G +D + L + NP + Y + + G
Sbjct: 1305 LIFNHVKAMAKKVDEMMLHEKYQE---GSKDSTYQWLETYTKANPRRSAYAFCIDPKHAG 1361
Query: 122 KFLLSYLPASRSR-HEF-ISVTPEGFRFRGQQFDSVNSLFRWFKEHFRD 168
F L + ++ H + + V P+G+ + + + +L FK F +
Sbjct: 1362 YFFLCFKAGEHAQVHSWPVKVIPQGYELQRNPYPDMRALCNGFKLLFTN 1410
>sp|Q2U561|SPT6_ASPOR Transcription elongation factor spt6 OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=spt6 PE=3 SV=1
Length = 1422
Score = 112 bits (279), Expect = 3e-24, Method: Composition-based stats.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 6/169 (3%)
Query: 3 QGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTE-EFEDLDE 61
+G+V++RPSSKG DHL VTWKVAD ++QHIDV E KEN FS+GR+L +G + DLD+
Sbjct: 1250 RGDVVIRPSSKGHDHLAVTWKVADGIFQHIDVLELDKENEFSVGRTLKVGGRYTYSDLDD 1309
Query: 62 IIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPG 121
+I HV MA V E++ Y++ G +D L + NP + Y + + G
Sbjct: 1310 LIFNHVKAMAKKVDEMMLHEKYQD---GTKDATYSWLETYTKANPKRSAYAFCIDPKHAG 1366
Query: 122 KFLLSYLPASRSR-HEF-ISVTPEGFRFRGQQFDSVNSLFRWFKEHFRD 168
F L + +R H + + V P+G+ + + + +L FK F +
Sbjct: 1367 YFFLCFKAGENARLHSWPVKVIPQGYELQRNPYPDMRALCNGFKLLFTN 1415
>sp|Q09915|SPT6_SCHPO Transcription elongation factor spt6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spt6 PE=1 SV=2
Length = 1365
Score = 102 bits (254), Expect = 2e-21, Method: Composition-based stats.
Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 11/171 (6%)
Query: 1 MDQGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIG------TE 54
M G++++RPSSKG+DH+ VTWKVA+ YQHIDV E KEN F++G+ L + T
Sbjct: 1185 MQVGDLVIRPSSKGSDHIVVTWKVAEGSYQHIDVLELEKENEFTIGQKLLVKGRFEKMTY 1244
Query: 55 EFEDLDEIIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVS 114
++ DLDE+I H+ +A + E+ +R+ G + + E+ L NP + Y
Sbjct: 1245 QYSDLDELIVLHIKAIAKKIDEMCIHDKFRK---GTQAETEKWLESYSEANPKRSCYAFC 1301
Query: 115 LSKNYPGKFLLSYLPASRSRHEF--ISVTPEGFRFRGQQFDSVNSLFRWFK 163
+PG F+L + + S + V P F +G + + +L FK
Sbjct: 1302 FDHQHPGYFILCFKASVNSPVTAWPVKVIPNAFFLQGNVYGDMTALCNGFK 1352
>sp|P23615|SPT6_YEAST Transcription elongation factor SPT6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPT6 PE=1 SV=1
Length = 1451
Score = 96.7 bits (239), Expect = 1e-19, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 5/164 (3%)
Query: 2 DQGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTEEFEDLDE 61
++GE ++R SS+G DHL +TWK+ DL+QHID++E KEN +LG+ L + +++ DLD+
Sbjct: 1275 ERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENPLALGKVLIVDNQKYNDLDQ 1334
Query: 62 IIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPG 121
II ++ + E+ S ++ G + + + R NPNK Y+ SL+ + PG
Sbjct: 1335 IIVEYLQNKVRLLNEMTSSEKFKS---GTKKDVVKFIEDYSRVNPNKSVYYFSLNHDNPG 1391
Query: 122 KFLLSYLPASRSRHEF--ISVTPEGFRFRGQQFDSVNSLFRWFK 163
F L + + S+ + +T G+ + SV L FK
Sbjct: 1392 WFYLMFKINANSKLYTWNVKLTNTGYFLVNYNYPSVIQLCNGFK 1435
>sp|Q6CVK3|SPT6_KLULA Transcription elongation factor SPT6 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=SPT6 PE=3 SV=1
Length = 1460
Score = 92.8 bits (229), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 92/164 (56%), Gaps = 5/164 (3%)
Query: 2 DQGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTEEFEDLDE 61
++G+ ++R SS+G DHL +TWK+ DL+QH+D+ E+ KEN +LG++L + +++ DLD+
Sbjct: 1275 ERGDFVIRQSSRGDDHLAITWKLDKDLFQHVDILEKDKENPLALGKTLIVEDQKYHDLDQ 1334
Query: 62 IIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPG 121
II ++ + E+ S +++ G + + + + + NPN+ Y+ S + +PG
Sbjct: 1335 IIVEYLQNKVRLLNEITSNEKFKK---GTKKEVIKFIEDYSKVNPNRSVYYFSFNYEHPG 1391
Query: 122 KFLLSYLPASRSRHEF--ISVTPEGFRFRGQQFDSVNSLFRWFK 163
F L + ++S+ + +T GF + +V L FK
Sbjct: 1392 WFYLMFKINAQSQLYVWNVKLTHTGFFLVNYNYPTVIQLCNGFK 1435
>sp|Q75EP8|SPT6_ASHGO Transcription elongation factor SPT6 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SPT6
PE=3 SV=2
Length = 1432
Score = 92.4 bits (228), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 5/164 (3%)
Query: 2 DQGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTEEFEDLDE 61
++GE I+R SS+G DHL +TWK+ DL+QH+D+ E KEN +LG++L + ++ DLD
Sbjct: 1250 ERGEFIIRQSSRGDDHLAITWKLDKDLFQHVDILELDKENPLALGKTLIVDNNKYNDLDH 1309
Query: 62 IIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPG 121
+I ++ + E+ S +++ G + + + + NPN+ Y++S + +PG
Sbjct: 1310 VIVEYLQNKIKLLNEITSNEKFKK---GTKKEVVKFIEDYSNVNPNRSVYYLSFNYEHPG 1366
Query: 122 KFLLSYLPASRSR--HEFISVTPEGFRFRGQQFDSVNSLFRWFK 163
F L + ++S+ + +T GF + +V L FK
Sbjct: 1367 WFYLMFKINAQSKLCTWNVKLTHNGFSLADYNYPTVIQLCNGFK 1410
>sp|P0CR73|SPT6_CRYNB Transcription elongation factor SPT6 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SPT6 PE=3 SV=1
Length = 1506
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 109/245 (44%), Gaps = 32/245 (13%)
Query: 3 QGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWI-GTEEFEDLDE 61
+G+ ++RPSSKG D + VTWKV +D+YQHIDV+E K N +SLGR L + G + DLD+
Sbjct: 1270 RGDCVIRPSSKGPDRIAVTWKVDEDVYQHIDVQEIDKPNEYSLGRILMVSGQYRYSDLDD 1329
Query: 62 IIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPG 121
+I HV A E+ Y+ E + + L+ + +P + Y S+ + PG
Sbjct: 1330 LIINHVKATARKFDEIQMHEKYKPE-----HELDAFLKNYVQAHPGRSIYGFSVDSDRPG 1384
Query: 122 KFLLSYLPASRSRHEFIS-----VTPEGFRFRGQQFDSVNSLFRWFKEHFRDPI------ 170
L +L I V P ++ V L FK + + +
Sbjct: 1385 YLKLCFLSKPTKDGGVIQTWPVRVLPGAYKLGNAIVPGVTELSNAFKMQYSEKLAEQGHQ 1444
Query: 171 ---PGAGVAVGP---GGQTPYGGARQTPGGGHLPY---HTPGMTPHHRGMPTP-LGHHSS 220
PG + P GG+TP G+R G P TP + G TP LG +
Sbjct: 1445 GKTPGIYLGKTPMHLGGRTPALGSRTPAMGSRTPALGSRTPAL-----GSRTPALGSRTP 1499
Query: 221 NMGGP 225
GGP
Sbjct: 1500 AQGGP 1504
>sp|P0CR72|SPT6_CRYNJ Transcription elongation factor SPT6 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SPT6 PE=3 SV=1
Length = 1506
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 109/245 (44%), Gaps = 32/245 (13%)
Query: 3 QGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWI-GTEEFEDLDE 61
+G+ ++RPSSKG D + VTWKV +D+YQHIDV+E K N +SLGR L + G + DLD+
Sbjct: 1270 RGDCVIRPSSKGPDRIAVTWKVDEDVYQHIDVQEIDKPNEYSLGRILMVSGQYRYSDLDD 1329
Query: 62 IIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPG 121
+I HV A E+ Y+ E + + L+ + +P + Y S+ + PG
Sbjct: 1330 LIINHVKATARKFDEIQMHEKYKPE-----HELDAFLKNYVQAHPGRSIYGFSVDSDRPG 1384
Query: 122 KFLLSYLPASRSRHEFIS-----VTPEGFRFRGQQFDSVNSLFRWFKEHFRDPI------ 170
L +L I V P ++ V L FK + + +
Sbjct: 1385 YLKLCFLSKPTKDGGVIQTWPVRVLPGAYKLGNAIVPGVTELSNAFKMQYSEKLAEQGHQ 1444
Query: 171 ---PGAGVAVGP---GGQTPYGGARQTPGGGHLPY---HTPGMTPHHRGMPTP-LGHHSS 220
PG + P GG+TP G+R G P TP + G TP LG +
Sbjct: 1445 GKTPGIYLGKTPMHLGGRTPALGSRTPAMGSRTPALGSRTPAL-----GSRTPALGSRTP 1499
Query: 221 NMGGP 225
GGP
Sbjct: 1500 AQGGP 1504
>sp|Q6BVE1|SPT6_DEBHA Transcription elongation factor SPT6 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=SPT6 PE=3 SV=1
Length = 1439
Score = 91.3 bits (225), Expect = 6e-18, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 9/171 (5%)
Query: 4 GEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTEEFEDLDEII 63
G+ ++RPSSKG ++LTVTWKV+++L+QH+ + +EN+ +G+ + +++ DLD++I
Sbjct: 1249 GDCVLRPSSKGPNYLTVTWKVSNNLFQHLSI----QENTQGMGKEYIVEHKKYADLDQLI 1304
Query: 64 ARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPGKF 123
+HV +A +V E+ +RE G + E L + NP Y PG F
Sbjct: 1305 FQHVQAIAKHVDEMCRHPKFRE---GTMSEVNEWLESYTKANPKNSAYVFCFDHKAPGWF 1361
Query: 124 LLSYLPASRSRHEFISVTPE--GFRFRGQQFDSVNSLFRWFKEHFRDPIPG 172
LL + + V E G+R +G + S+ L FK+ F+ + G
Sbjct: 1362 LLLFKVNVNTPITTWHVKTECDGYRLKGFSYPSMLRLCNGFKQTFKSYVKG 1412
>sp|Q6FLB1|SPT6_CANGA Transcription elongation factor SPT6 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SPT6 PE=1 SV=1
Length = 1449
Score = 89.7 bits (221), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 5/164 (3%)
Query: 2 DQGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTEEFEDLDE 61
++G+ ++R SS+G DHL +TWK+ DL+QH+D++E KEN +LG+ L + + + DLD+
Sbjct: 1274 ERGDFVIRQSSRGDDHLAITWKLDKDLFQHVDIQELEKENPLALGKVLVVEGQRYHDLDQ 1333
Query: 62 IIARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPG 121
II ++ + EL S ++ G + + + + + NP K Y+ SL+ PG
Sbjct: 1334 IIVEYLQNKIRLLNELTSNEKFK---AGTKKEVVKFIEDYSKVNPKKSVYYFSLNYENPG 1390
Query: 122 KFLLSYLPASRSRHEF--ISVTPEGFRFRGQQFDSVNSLFRWFK 163
F L + + S+ + +T GF + +V L FK
Sbjct: 1391 WFYLIFKLNAESKLYIWNVKLTHTGFFLVNYNYPTVIQLCNGFK 1434
>sp|Q3MNT0|SPT6_CANAL Transcription elongation factor SPT6 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=SPT6 PE=3 SV=1
Length = 1401
Score = 80.1 bits (196), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 4 GEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGKENSFSLGRSLWIGTEEFEDLDEII 63
G+ ++RPSSKGA +LT+TWKV ++L+QH+ V EE F + + + +EDLD++
Sbjct: 1229 GDYVIRPSSKGASYLTITWKVGNNLFQHLLV-EERSRGRF---KEYIVDGKTYEDLDQLA 1284
Query: 64 ARHVSPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPGKF 123
+H+ +A NV +++ +RE G E L R NP Y PG F
Sbjct: 1285 FQHIQVIAKNVTDMVRHPKFRE---GTLSVVHEWLESYTRANPKSSAYVFCYDHKSPGNF 1341
Query: 124 LLSYLPASRSRHEFISVTPE--GFRFRGQQFDSVNSLFRWFKE 164
LL + ++ V E G+ R + ++ SL FK+
Sbjct: 1342 LLLFKVNVSAKVVTWHVKTEVGGYELRSSVYPNMLSLCNGFKQ 1384
>sp|Q61120|SHC3_MOUSE SHC-transforming protein 3 OS=Mus musculus GN=Shc3 PE=1 SV=2
Length = 474
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 15/112 (13%)
Query: 67 VSPMAANVR---ELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPGKF 123
V+P A + R EL + +Y+ E R +AE +LR++ + V S PG F
Sbjct: 361 VTPRAPDARMLEELNAEPWYQGEMS--RKEAEALLREDG-------DFLVRKSTTNPGSF 411
Query: 124 LLSYLPASRSRHEFISVTPEG-FRFRGQQFDSVNSLFRWFKEHFRDPIPGAG 174
+L+ + +++H + V PEG R + + FDS++ L + E PI AG
Sbjct: 412 VLTGMHNGQAKH-LLLVDPEGTIRTKDRVFDSISHLINYHLESSL-PIVSAG 461
>sp|Q6S5L8|SHC4_HUMAN SHC-transforming protein 4 OS=Homo sapiens GN=SHC4 PE=1 SV=1
Length = 630
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 81 RYYREEC--GGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPGKFLLSYLPASRSRHEFI 138
+ + EEC G + KA E L + + + V S PG+++LS L +++H +
Sbjct: 520 QLWSEECYHGKLSRKAAESLLVKDGD------FLVRESATSPGQYVLSGLQGGQAKH-LL 572
Query: 139 SVTPEG-FRFRGQQFDSVNSLFRWFKEHFRDPIP 171
V PEG R + FD+V L R+ H + +P
Sbjct: 573 LVDPEGKVRTKDHVFDNVGHLIRY---HMDNSLP 603
>sp|O70143|SHC3_RAT SHC-transforming protein 3 OS=Rattus norvegicus GN=Shc3 PE=2 SV=1
Length = 594
Score = 35.4 bits (80), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 68 SPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPGKFLLSY 127
+P A + EL + +Y+ G M K E L QE + + V S PG F+L+
Sbjct: 485 APDAKMLEELNAEPWYQ---GEMSRKEAEALLQEDGD------FLVRKSTTNPGSFVLTG 535
Query: 128 LPASRSRHEFISVTPEG-FRFRGQQFDSVNSLFRWFKEHFRDPIPGAG 174
+ +++H + V PEG R + + FDS++ L + E PI AG
Sbjct: 536 MHNGQAKH-LLLVDPEGTVRTKDRVFDSISHLITYHLESSL-PIVSAG 581
>sp|F1SPM8|AAK1_PIG AP2-associated protein kinase 1 OS=Sus scrofa GN=AAK1 PE=2 SV=2
Length = 968
Score = 35.4 bits (80), Expect = 0.37, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 163 KEHFRDPIPGAGVAVGPGGQTPYGGARQTPGGGHLPYHTPGMTPHHRGM--PTPLGHHSS 220
K DPIP ++ P Q P G Q P G LP P +TP R M P P SS
Sbjct: 350 KARLTDPIPTTETSIAP-RQRPKAGQTQ-PNPGILPIQ-PALTPRKRAMVQPPPQVAGSS 406
Query: 221 NMGGPVLMHPPTGTPTP 237
N G + P T P
Sbjct: 407 NQPGLLASVPQPKTQAP 423
>sp|Q04929|CRK_CHICK Adapter molecule crk OS=Gallus gallus GN=CRK PE=1 SV=1
Length = 305
Score = 35.0 bits (79), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 19/77 (24%)
Query: 111 YFVSLSKNYPGKFLLSYLPASRSRHEFIS-------------------VTPEGFRFRGQQ 151
+ V S + PG F+LS +SR H ++ + P FR Q+
Sbjct: 35 FLVRDSGSIPGDFVLSVSESSRVSHYIVNSLGPAGGRRAGGEGPGAPGLNPTRFRIGDQE 94
Query: 152 FDSVNSLFRWFKEHFRD 168
FDS+ SL ++K H+ D
Sbjct: 95 FDSLPSLLEFYKIHYLD 111
>sp|C4L3C2|RNZ_EXISA Ribonuclease Z OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
GN=rnz PE=3 SV=1
Length = 301
Score = 35.0 bits (79), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 145 FRFRGQQFDSVNSLFRWFKEHFRDPIPGAGVAVGPGGQTPYGGARQTPGGGHLPYHTPGM 204
F F G+ +DS KE+ +PIPG VA+ G P AR+ G L H
Sbjct: 180 FEFEGKWYDS--------KEYVTEPIPGKIVAI-LGDTIPCENARKLADGADLLVHEATF 230
Query: 205 TPHHRGMPTPLGHHSS 220
+ + GH ++
Sbjct: 231 MEAEQALARKYGHSTT 246
>sp|Q4WVU5|PPIL2_ASPFU Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=cyp8 PE=3 SV=2
Length = 579
Score = 33.9 bits (76), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 75/199 (37%), Gaps = 32/199 (16%)
Query: 20 VTWKVADDLYQHIDVREEGKENSFS--------LGRSLW---IGTEEFEDLDEIIARHVS 68
VT+KV D + +R G N F+ + LW + EEF D I +
Sbjct: 112 VTYKVLTDNTHIVALRNTG--NVFAWDTVERLNIKGKLWRDLVTDEEFSRKDIITLQ--D 167
Query: 69 PMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPGKFLLSYL 128
P R L +F Y +E G E+ +R+ R +P+ F +L K L +
Sbjct: 168 PQNIESRNLSTFNYLKE---GESALTEQQIRE--REDPSNNVNFNALGN--AAKILKAKE 220
Query: 129 PASRSRHEFISVTPEGFRFRGQQFDSVNSLFRWFKEHFRDPIPGAGVAVGPGGQTPYGGA 188
+++R E G +G +++ K V+ G PY A
Sbjct: 221 AVAKARAERAQRAESGAASKGLTKPGMSATAASQKT----------VSHQAGKPIPYNAA 270
Query: 189 RQTPGGGHLPYHTPGMTPH 207
R T G + + GMTPH
Sbjct: 271 RHTTGLAAASFTSTGMTPH 289
>sp|P09760|FER_RAT Tyrosine-protein kinase Fer OS=Rattus norvegicus GN=Fer PE=1 SV=2
Length = 823
Score = 33.5 bits (75), Expect = 1.4, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 91 RDKAEEVLRQEKRNNPNKIHYFVSLSKNYPGKFLLSYLPASRSRHEFISVTPEGFRFRGQ 150
R +A+E+L+Q+ + V S PG+++LS + RH I +RF G
Sbjct: 468 RIEAQELLKQQG-------DFLVRESHGKPGEYVLSVYSDGQRRHFIIQFVDNLYRFEGT 520
Query: 151 QFDSVNSL 158
F ++ L
Sbjct: 521 GFSNIPQL 528
>sp|P70451|FER_MOUSE Tyrosine-protein kinase Fer OS=Mus musculus GN=Fer PE=1 SV=2
Length = 823
Score = 33.5 bits (75), Expect = 1.4, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 91 RDKAEEVLRQEKRNNPNKIHYFVSLSKNYPGKFLLSYLPASRSRHEFISVTPEGFRFRGQ 150
R +A+E+L+Q+ + V S PG+++LS + RH I +RF G
Sbjct: 468 RIEAQELLKQQG-------DFLVRESHGKPGEYVLSVYSDGQRRHFIIQFVDNLYRFEGT 520
Query: 151 QFDSVNSL 158
F ++ L
Sbjct: 521 GFSNIPQL 528
>sp|Q64010|CRK_MOUSE Adapter molecule crk OS=Mus musculus GN=Crk PE=1 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 18/76 (23%)
Query: 111 YFVSLSKNYPGKFLLSYLPASRSRHEFIS------------------VTPEGFRFRGQQF 152
+ V S PG ++LS SR H I+ V+P R Q+F
Sbjct: 35 FLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEF 94
Query: 153 DSVNSLFRWFKEHFRD 168
DS+ +L ++K H+ D
Sbjct: 95 DSLPALLEFYKIHYLD 110
>sp|P46108|CRK_HUMAN Adapter molecule crk OS=Homo sapiens GN=CRK PE=1 SV=2
Length = 304
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 18/76 (23%)
Query: 111 YFVSLSKNYPGKFLLSYLPASRSRHEFIS------------------VTPEGFRFRGQQF 152
+ V S PG ++LS SR H I+ V+P R Q+F
Sbjct: 35 FLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEF 94
Query: 153 DSVNSLFRWFKEHFRD 168
DS+ +L ++K H+ D
Sbjct: 95 DSLPALLEFYKIHYLD 110
>sp|Q63768|CRK_RAT Adapter molecule crk OS=Rattus norvegicus GN=Crk PE=1 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 18/76 (23%)
Query: 111 YFVSLSKNYPGKFLLSYLPASRSRHEFIS------------------VTPEGFRFRGQQF 152
+ V S PG ++LS SR H I+ V+P R Q+F
Sbjct: 35 FLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEF 94
Query: 153 DSVNSLFRWFKEHFRD 168
DS+ +L ++K H+ D
Sbjct: 95 DSLPALLEFYKIHYLD 110
>sp|Q2M2I8|AAK1_HUMAN AP2-associated protein kinase 1 OS=Homo sapiens GN=AAK1 PE=1 SV=3
Length = 961
Score = 33.1 bits (74), Expect = 1.9, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 32/84 (38%), Gaps = 11/84 (13%)
Query: 163 KEHFRDPIPGAGVAVGPGGQTPYGGARQTPGGGHLPYHTPGMTPHHRG--MPTPLGHHSS 220
K DPIP ++ P Q P G Q P G LP P +TP R P P SS
Sbjct: 350 KARLTDPIPTTETSIAP-RQRPKAGQTQ-PNPGILPIQ-PALTPRKRATVQPPPQAAGSS 406
Query: 221 NMGGPVLMHP------PTGTPTPH 238
N G + P P P P
Sbjct: 407 NQPGLLASVPQPKPQAPPSQPLPQ 430
>sp|Q92529|SHC3_HUMAN SHC-transforming protein 3 OS=Homo sapiens GN=SHC3 PE=1 SV=1
Length = 594
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 68 SPMAANVRELLSFRYYREECGGMRDKAEEVLRQEKRNNPNKIHYFVSLSKNYPGKFLLSY 127
+P A + EL + +Y+ E R +AE +L ++ + V S PG F+L+
Sbjct: 485 APDAKMLEELQAETWYQGEMS--RKEAEGLLEKDG-------DFLVRKSTTNPGSFVLTG 535
Query: 128 LPASRSRHEFISVTPEG-FRFRGQQFDSVNSLF 159
+ +++H + V PEG R + + FDS++ L
Sbjct: 536 MHNGQAKH-LLLVDPEGTIRTKDRVFDSISHLI 567
>sp|F1MH24|AAK1_BOVIN AP2-associated protein kinase 1 OS=Bos taurus GN=AAK1 PE=1 SV=2
Length = 957
Score = 32.3 bits (72), Expect = 3.2, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 163 KEHFRDPIPGAGVAVGPGGQTPYGGARQTPGGGHLPYHTPGMTPHHRG--MPTPLGHHSS 220
K DPIP ++ P Q P G Q P G LP P +TP R P P SS
Sbjct: 350 KARLTDPIPTTETSIAP-RQRPKAGQTQ-PNPGILPIQ-PALTPRKRATVQPPPQAAGSS 406
Query: 221 NMGG 224
N G
Sbjct: 407 NQPG 410
>sp|C4K3I8|STHA_HAMD5 Soluble pyridine nucleotide transhydrogenase OS=Hamiltonella
defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=sthA
PE=3 SV=1
Length = 468
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 2 DQGEVIVRPSSKGADHLTVTWKVADDLYQHIDVREEGK--ENSFSLGRSLWIGTEEFEDL 59
DQG + + ++G + + + + +Y ++ GK + L +G +F+ L
Sbjct: 326 DQGRIASQAITQGINSVRLIENIPTGIYTIPEISSVGKTEQELTDLKVPYEVGRAQFKHL 385
Query: 60 DEIIARHVSPMAANVRELLSFRYYREECG--GMRDKAEEVLR-----QEKRNNPNKIHYF 112
++ M A ++L R +E G ++A E++ E++N N I YF
Sbjct: 386 AR---AQIAGMEAGSLKILFHRESKEILGIHCFGERAAEIIHIGQAIMEQKNGGNTIDYF 442
Query: 113 VSLSKNYP 120
V+ + NYP
Sbjct: 443 VNTTFNYP 450
>sp|Q9VT65|CANB_DROME Calpain-B OS=Drosophila melanogaster GN=CalpB PE=1 SV=2
Length = 925
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 13/71 (18%)
Query: 169 PIPGAGVAV--GPGGQTPYGGARQTPGGG-----------HLPYHTPGMTPHHRGMPTPL 215
P G G+ V P PY A PG G LPY T M P+ GMP P
Sbjct: 80 PTMGMGMPVPEAPSAPAPYPSATPYPGSGLYPSLPSANVSSLPYPTAPMAPYPTGMPYPT 139
Query: 216 GHHSSNMGGPV 226
G N+ P
Sbjct: 140 GMPQPNLPYPA 150
>sp|Q8LDU4|RCCR_ARATH Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis
thaliana GN=RCCR PE=1 SV=2
Length = 319
Score = 30.8 bits (68), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 49 LWIGTEEFEDLDEIIARHVSPMAANVRELLSFRYYREE 86
L I EE + L+EI+ HVSP A V E+ R +EE
Sbjct: 225 LKIDAEEEDKLEEILRDHVSPAAKEVLEVWLERCVKEE 262
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,136,386
Number of Sequences: 539616
Number of extensions: 5558889
Number of successful extensions: 14337
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 126
Number of HSP's that attempted gapping in prelim test: 14022
Number of HSP's gapped (non-prelim): 393
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)