RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy18151
(204 letters)
>d1bifa2 c.60.1.4 (A:250-468)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
phosphatase domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 219
Score = 49.1 bits (116), Expect = 6e-08
Identities = 35/93 (37%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 110 WVDDHKALDDIHAGICEGQTYTEIYTNHCAQYIDTRADKFYNRWPQGECYKDVLTRLELI 169
+ K L++I AG+CE TY EI ++ ++ DK+ R+P+GE Y+D++ RLE +
Sbjct: 67 PYEQFKVLNEIDAGVCEEMTYEEIQDHYPLEFALRDQDKYRYRYPKGESYEDLVQRLEPV 126
Query: 170 ILKIEHSKSNLLIVSHPAVLRCLLGYFQEEPPD 202
I+++E + N+L++ H AV+RCLL YF ++ +
Sbjct: 127 IMELERQE-NVLVICHQAVMRCLLAYFLDKAAE 158
>d1fzta_ c.60.1.1 (A:) Phosphoglycerate mutase {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 211
Score = 45.7 bits (107), Expect = 8e-07
Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 84 KPLKKWEITYQVRTESVVNINHKQVIWVDDHKALDDIHAGICEGQTYTEIYTNHCAQYID 143
Q + ++ + + + L++ + G +G + A+ +
Sbjct: 58 IAFTSALQRAQKTCQIILEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQVQ 117
Query: 144 TRADKFYNRWPQGECYKD----VLTRLELIILKIEHSKSNLLIVSHPAVLRCLLGYFQEE 199
+ P GE KD VL + I+ +LI +H LR L+ +
Sbjct: 118 IWRRSYDIAPPNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALIMDLEGL 177
Query: 200 PPD 202
D
Sbjct: 178 TGD 180
>d1h2ea_ c.60.1.1 (A:) Broad specificity phosphatase PhoE (YhfR)
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 207
Score = 38.9 bits (89), Expect = 2e-04
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Query: 89 WEITYQVRTESVVNINHKQVIWVDDHKALDDIHAGICEGQTYTEIYTNHCAQYIDTRADK 148
+ T E+ + ++I + + L +IH G EG+T+ EI +
Sbjct: 52 YTSTSGRALETAEIVRGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDPIAFDHFWQAP 111
Query: 149 FYNRWPQGECYKDVLTRLE--LIILKIEHSKSNLLIVSHPAVLRCLLGYFQEEPPD 202
+GE + DV R + + H +LIV+H VL+ L+ F++ P D
Sbjct: 112 HLYAPQRGERFCDVQQRALEAVQSIVDRHEGETVLIVTHGVVLKTLMAAFKDTPLD 167
>d1xq9a_ c.60.1.1 (A:) Phosphoglycerate mutase {Plasmodium
falciparum [TaxId: 5833]}
Length = 241
Score = 38.0 bits (87), Expect = 4e-04
Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Query: 141 YIDTRADKFYNRWPQGECYKDVLTRL----ELIILKIEHSKSNLLIVSHPAVLRCLLGYF 196
+ + + P EC KD + R+ I + +++ +H LR L+ +
Sbjct: 136 HNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPDILANKKVMVAAHGNSLRGLVKHL 195
Query: 197 QEEPPD 202
Sbjct: 196 DNLSEA 201
>d1qhfa_ c.60.1.1 (A:) Phosphoglycerate mutase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 240
Score = 30.7 bits (68), Expect = 0.097
Identities = 13/114 (11%), Positives = 27/114 (23%)
Query: 89 WEITYQVRTESVVNINHKQVIWVDDHKALDDIHAGICEGQTYTEIYTNHCAQYIDTRADK 148
E Y K+ + + +Y +
Sbjct: 85 NERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPPIDASSPFSQKGDERYKYVDPNV 144
Query: 149 FYNRWPQGECYKDVLTRLELIILKIEHSKSNLLIVSHPAVLRCLLGYFQEEPPD 202
+L + +I K S ++I +H LR L+ + +
Sbjct: 145 LPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHGNSLRGLVKHLEGISDA 198
>d1v37a_ c.60.1.1 (A:) Alpha-ribazole-5'-phosphate phosphatase
{Thermus thermophilus [TaxId: 274]}
Length = 171
Score = 29.7 bits (65), Expect = 0.15
Identities = 21/157 (13%), Positives = 44/157 (28%), Gaps = 20/157 (12%)
Query: 47 RH-RSEYNSPSTIPFVIRYCGR---PLKAVVQSEINSILPLKPLKKWEITYQVRTESVVN 102
RH + +N R G PL A +++ + P + +R
Sbjct: 7 RHGETLWNREG------RLLGWTDLPLTAEGEAQARRLKGALPSLPAFSSDLLRARRTAE 60
Query: 103 INHKQVIWVDDHKALDDIHAGICEGQTYTEIYTNHCAQYIDTRADKFYNRWPQGECYKDV 162
+ + + + +T Y ++ + E
Sbjct: 61 LAGFSPRLYPELREIHFGALEGALWETLDPRYKEALLRFQGFHPPGGESLSAFQERVFRF 120
Query: 163 LTRLELIILKIEHSKSNLLIVSHPAVLRCLLGYFQEE 199
L L K+ ++ +H V+R +L E+
Sbjct: 121 LEGL----------KAPAVLFTHGGVVRAVLRALGED 147
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 26.8 bits (58), Expect = 1.4
Identities = 11/120 (9%), Positives = 34/120 (28%)
Query: 7 HFEVNICKSFVQEQVFSSSSEFGLKSSLGRPGLDKSFYGDRHRSEYNSPSTIPFVIRYCG 66
++ V +++ + + G ++++ + R
Sbjct: 58 LVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSE 117
Query: 67 RPLKAVVQSEINSILPLKPLKKWEITYQVRTESVVNINHKQVIWVDDHKALDDIHAGICE 126
L ++ + + Y+ T ++ Q+ VD +D++ A
Sbjct: 118 EVLLERLKGRGRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVDAVGTMDEVFARALR 177
>d1i5pa3 f.1.3.1 (A:1-263) delta-Endotoxin (insectocide), N-terminal
domain {Bacillus thuringiensis subsp. kurstaki, CRY2AA
[TaxId: 29339]}
Length = 263
Score = 26.8 bits (59), Expect = 1.6
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 128 QTYTEIYTNHCAQYIDTRADKFYNRW 153
+ YT Y+N+C T R
Sbjct: 213 RNYTRDYSNYCINTYQTAFRGLNTRL 238
>d2igia1 c.55.3.5 (A:1-180) Oligoribonuclease {Escherichia coli
[TaxId: 562]}
Length = 180
Score = 24.9 bits (53), Expect = 6.2
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 113 DHKALDDIHAGICEGQTYTEIYTN 136
H+A+DDI + E Y E +
Sbjct: 156 THQAMDDIRESVAELAYYREHFIK 179
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.428
Gapped
Lambda K H
0.267 0.0442 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 768,017
Number of extensions: 33252
Number of successful extensions: 74
Number of sequences better than 10.0: 1
Number of HSP's gapped: 72
Number of HSP's successfully gapped: 12
Length of query: 204
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 123
Effective length of database: 1,295,466
Effective search space: 159342318
Effective search space used: 159342318
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.1 bits)