BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18158
(654 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|322802531|gb|EFZ22846.1| hypothetical protein SINV_14294 [Solenopsis invicta]
Length = 592
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/564 (66%), Positives = 434/564 (76%), Gaps = 54/564 (9%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T GMT+A++++ P +D+ RT EL E LKPYNV E++EEL+ RME+LSKLN LVK+WI++
Sbjct: 14 TLGMTSAISVAEPKPMDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRD 73
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
SIA+N+PP VAE+VGGKIYTFGSYRLGVHHKGADIDALCV PRH+ RADYF+SFF+ L+
Sbjct: 74 TSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRADYFTSFFDLLR 133
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+EVTDLRAVEEAFVPVIKMNFDGIEIDMLFA+L LKEIPD MDLRDDMLLKNLDQKCV
Sbjct: 134 MQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQKCV 193
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEILRLVPNIENFRLALR IKLWAK+HGIYSNVLGYLGGVSWAMLVAR CQ
Sbjct: 194 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQ 253
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA A+TL+ KFFLVFSQWKWPQPVLLK+PDNVNLG+PVWDPRVNV+DRYHLMPIITP
Sbjct: 254 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITP 313
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYPQQNSTFNVSISTRTIMQE F+ G I+E+I GK WDKLFE PNFF KY+HY+VL+
Sbjct: 314 AYPQQNSTFNVSISTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFFGKYKHYIVLL 373
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
A S++AEDQLEWCGL+ESK+RHLIG LERNPHI LAHVNPE + P +
Sbjct: 374 AKSLTAEDQLEWCGLVESKIRHLIGMLERNPHITLAHVNPEAF-------------PPLN 420
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFI----------AANVILNLTYDIQHFTNAVHW 497
E + SMWFIGL F N+ ++LTYDI+ F + V
Sbjct: 421 PESGKH------------CSMWFIGLSFSKCEKSEKSEKGENINVDLTYDIKSFVDTVER 468
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSG------------------ 539
QA Q M K+GM IE +HVK+K L+ Y+ +LK+++K SG
Sbjct: 469 QAEQINMFKEGMWIEAKHVKRKDLNTYVSPSLLKRERKVSSGVHRNGNIAGNGNSGSVSP 528
Query: 540 -DQNTSAKKRKSDQALDELGDKSR 562
+Q ++KKR SDQ LD G K R
Sbjct: 529 RNQGDTSKKRLSDQTLDACGKKRR 552
>gi|307201288|gb|EFN81136.1| Poly(A) polymerase gamma [Harpegnathos saltator]
Length = 609
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/591 (64%), Positives = 449/591 (75%), Gaps = 56/591 (9%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T GMT+A++++ P LD+ RT EL E LKPYNV E++EEL+ RME+LSKLN LVK+WI++
Sbjct: 22 TLGMTSAISVAEPKPLDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRD 81
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
SIA+N+PP VAE+VGGKIYTFGSYRLGVHHKGADIDALCV PRH+ R+DYF+SFFE LK
Sbjct: 82 TSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRSDYFNSFFELLK 141
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+EVTDLRAVEEAFVPVIKMNFDGIEIDMLFA+L LKEIPD MDLRDDMLLKNLDQKCV
Sbjct: 142 MQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQKCV 201
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEILRLVPNIENFRLALR IKLWAK+HGIYSNVLGYLGGVSWAMLVAR CQ
Sbjct: 202 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQ 261
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA A+TL+ KFFLVFSQWKWPQPVLLK+PDNVNLG+PVWDPRVN++DRYHLMPIITP
Sbjct: 262 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITP 321
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYPQQNSTFNVS+STRTIMQE F+ G +I+E+I GK WDKLFE PNFF+KY+HY+VL+
Sbjct: 322 AYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKANWDKLFEPPNFFSKYKHYIVLL 381
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
A S +AEDQLEWCGL+ESK+RHLIG LERNPHINLAHVNPE + P +
Sbjct: 382 ARSSTAEDQLEWCGLVESKIRHLIGTLERNPHINLAHVNPEAF-------------PPLD 428
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAA-NVILNLTYDIQHFTNAVHWQATQSKMMK 506
E + SMWFIGL F + N+ ++LTYDI+ F + QA Q M+K
Sbjct: 429 PEPDKH------------CSMWFIGLLFAKSENLNIDLTYDIKSFVETIERQAEQINMLK 476
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQ--------------------NTSAK 546
+GM IE +HVK+K L Y+ +LKK++K G +T+ +
Sbjct: 477 EGMWIEAKHVKRKDLHTYVSPSLLKKERKVSGGVHRNGSIAGNGNSGSVSPRNPGDTTGR 536
Query: 547 KRKSDQALDELGDKSRPRLDSDSNSLSDKVNN----ISNNGDQSSSECTED 593
KR SDQ +D G K R N + ++V N + + G+ S+S+ D
Sbjct: 537 KRLSDQGIDACGKKRR------VNEVEEQVENSSIVVQSCGEDSNSDFNLD 581
>gi|383862407|ref|XP_003706675.1| PREDICTED: poly(A) polymerase gamma [Megachile rotundata]
Length = 616
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/556 (66%), Positives = 432/556 (77%), Gaps = 46/556 (8%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T GMT+A++++ P DL RT EL E LKPYNV E++EEL+ RME+LSKLN LVK+WI++
Sbjct: 26 TLGMTSAISVAEPKPSDLTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRD 85
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
SIA+N+PP VAE+VGGKIYTFGSYRLGVHHKGADIDALCV PRH+ R+DYFSSFF+ LK
Sbjct: 86 TSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRSDYFSSFFDLLK 145
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+EVTDLRAVEEAFVPVIKMNFDGIEIDMLFA+LALKEIPD MDLRDDMLLKNLDQKCV
Sbjct: 146 MQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCV 205
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEILRLVPNIENFRLALR IKLWAK+HGIYSNVLGYLGGVSWAMLVAR CQ
Sbjct: 206 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQ 265
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA A+TL+ KFFLVFSQWKWPQPVLLK+PDNVNLGFPVWDPRVN++DRYHLMPIITP
Sbjct: 266 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITP 325
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYPQQNSTFNVS+STRTIMQE F+ G +I+E+I GK WDKLFE PNFF KY+HY+VL+
Sbjct: 326 AYPQQNSTFNVSVSTRTIMQEAFETGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLL 385
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
A S+SAEDQLEWCGL+ESK+RHLIG LERNPHI LAHVNPE + P +
Sbjct: 386 ARSLSAEDQLEWCGLVESKIRHLIGTLERNPHITLAHVNPEAF-------------PPL- 431
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAA-NVILNLTYDIQHFTNAVHWQATQSKMMK 506
P G SMWFIGL F + N+ ++LTYDI+ F +++ QA Q ++K
Sbjct: 432 -----------EPEPEGHCSMWFIGLLFAKSENLNVDLTYDIKSFVDSIQRQAEQLSVLK 480
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSG--------------------DQNTSAK 546
+GM IE +HVK+K L Y+ +L++++K + + +
Sbjct: 481 EGMWIEAKHVKRKDLHTYVSPSLLRRERKVSGSVHKNGNIAGNGNNGSVSPRNQADAANR 540
Query: 547 KRKSDQALDELGDKSR 562
KR SDQ D G K R
Sbjct: 541 KRGSDQNADLCGKKRR 556
>gi|307183537|gb|EFN70300.1| Poly(A) polymerase gamma [Camponotus floridanus]
Length = 603
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/578 (64%), Positives = 442/578 (76%), Gaps = 36/578 (6%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T GMT+A++++ P +D+ RT EL E LKPYNV E++EEL+ RME+LSKLN LVK+WI++
Sbjct: 26 TLGMTSAISVAEPKPIDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRD 85
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
SIA+N+PP VAE+VGGKIYTFGSYRLGVHHKGADIDALCV PRH+ R+DYF++FFE LK
Sbjct: 86 TSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRSDYFATFFELLK 145
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+EVTDLRAVEEAFVPVIKMNFDGIEIDMLFA+L LKEIPD MDL+DDMLLKNLDQKCV
Sbjct: 146 MQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLKDDMLLKNLDQKCV 205
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEILRLVPNIENFRLALR IKLWAK+HGIYSNVLGYLGGVSWAMLVAR CQ
Sbjct: 206 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQ 265
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA A+TL+ KFFLVFSQWKWPQPVLLK+PDNVNLG+PVWDPRVNV+DRYHLMPIITP
Sbjct: 266 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITP 325
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYPQQNSTFNVS+STRTIMQE F+ G I+E+I GK WDKLFE PNFF KY+HY+VL+
Sbjct: 326 AYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIIGKATWDKLFEPPNFFGKYKHYIVLL 385
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
A S SAEDQLEWCGL+ESK+RHLIG LERNPHI LAHVNPE + P +
Sbjct: 386 ARSSSAEDQLEWCGLVESKIRHLIGTLERNPHITLAHVNPEAF-------------PPLD 432
Query: 448 AE-GKEEGGENTSPPVSGVASMWFIGLDFIAANVI-LNLTYDIQHFTNAVHWQATQSKMM 505
E GK SMWFIGL F + + ++LTYDI+ F + QA Q M+
Sbjct: 433 PEPGKH-------------CSMWFIGLSFAKSESLNIDLTYDIKSFVETIERQAEQISML 479
Query: 506 KDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSG---DQNTSAKKRKSDQALDELGDKSR 562
K+GM IE +HVK+K L Y+ + ++K+++K G + N + + GD SR
Sbjct: 480 KEGMWIEAKHVKRKDLHTYVSSSLVKRERKVSGGVHRNGNIAGNGNSGSISPRSQGDPSR 539
Query: 563 PRLDS--DSNSLSDKVNNISNNGDQSS---SECTEDNS 595
RL DS +VN+ + +S C ED++
Sbjct: 540 KRLSDQLDSCGKKRRVNDTEEQIENASLVVQSCGEDSN 577
>gi|380022244|ref|XP_003694961.1| PREDICTED: poly(A) polymerase gamma [Apis florea]
Length = 619
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/599 (63%), Positives = 454/599 (75%), Gaps = 31/599 (5%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T GMT+A++++ P D RT EL E LKPYNV E++EEL+ RME+LSKLN LVK+WI++
Sbjct: 27 TLGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRD 86
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
S+A+N+PP VAE+VGGKIYTFGSYRLGVHHKGADIDALCV PRH+ R+DYF+SFFE LK
Sbjct: 87 TSVARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRSDYFTSFFELLK 146
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+EVTDLRAVEEAFVPVIKMNFDGIEIDMLFA+LALKEIPD MDLRDDMLLKNLDQKCV
Sbjct: 147 MQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCV 206
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEILRLVPNIENFRLALR IKLWAK+HGIYSNVLGYLGGVSWAMLVAR CQ
Sbjct: 207 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQ 266
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA A+TL+ KFFLVFSQWKWPQPVLLK+PDNVNLGFPVWDPRVN++DRYHLMPIITP
Sbjct: 267 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITP 326
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYPQQNSTFNVS+STRTIMQE F+ G +I+E+I GK WDKLFE PNFF KY+HY+VL+
Sbjct: 327 AYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLL 386
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
A S++AEDQLEWCGL+ESK+RHLIG LERNPHI LAHVNPE + P +
Sbjct: 387 ARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITLAHVNPEAF-------------PPLE 433
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAA-NVILNLTYDIQHFTNAVHWQATQSKMMK 506
E + SMWFIGL F + N+ ++LTYDI+ F +++ QA Q M+K
Sbjct: 434 PEPERH------------CSMWFIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLK 481
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKK---TKSGDQNTSAKKRKSDQALDELGDKSRP 563
+GM IEV+HVKK+ L Y+ +LK+++K T + N + + G+ +
Sbjct: 482 EGMWIEVKHVKKRDLHTYVSPSLLKRERKVSGTVHKNGNIAGNGNSGSVSPRNPGNTTNR 541
Query: 564 RLDSDSNSLSDKVNNISNNGDQSS-SECTEDNSL-SQVYGLNDSVADSIDNSLDDLSST 620
+ SD N + N+G+Q S + ED SL Q G + + S+D LS+
Sbjct: 542 KRLSDQNQDTSIKKRKVNDGEQPSVTHHGEDGSLVVQSCGEDSNSGFSLDEYKQTLSAA 600
>gi|328792143|ref|XP_393202.3| PREDICTED: poly(A) polymerase gamma [Apis mellifera]
Length = 619
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/599 (63%), Positives = 454/599 (75%), Gaps = 31/599 (5%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T GMT+A++++ P D RT EL E LKPYNV E++EEL+ RME+LSKLN LVK+WI++
Sbjct: 27 TLGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRD 86
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
S+A+N+PP VAE+VGGKIYTFGSYRLGVHHKGADIDALCV PRH+ R+DYF+SFFE LK
Sbjct: 87 TSVARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRSDYFTSFFELLK 146
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+EVTDLRAVEEAFVPVIKMNFDGIEIDMLFA+LALKEIPD MDLRDDMLLKNLDQKCV
Sbjct: 147 MQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCV 206
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEILRLVPNIENFRLALR IKLWAK+HGIYSNVLGYLGGVSWAMLVAR CQ
Sbjct: 207 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQ 266
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA A+TL+ KFFLVFSQWKWPQPVLLK+PDNVNLGFPVWDPRVN++DRYHLMPIITP
Sbjct: 267 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITP 326
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYPQQNSTFNVS+STRTIMQE F+ G +I+E+I GK WDKLFE PNFF KY+HY+VL+
Sbjct: 327 AYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLL 386
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
A S++AEDQLEWCGL+ESK+RHLIG LERNPHI LAHVNPE + P +
Sbjct: 387 ARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITLAHVNPEAF-------------PPLE 433
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAA-NVILNLTYDIQHFTNAVHWQATQSKMMK 506
E + SMWFIGL F + N+ ++LTYDI+ F +++ QA Q M+K
Sbjct: 434 PEPERH------------CSMWFIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLK 481
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKK---TKSGDQNTSAKKRKSDQALDELGDKSRP 563
+GM IEV+HVKK+ L Y+ +LK+++K T + N + + G+ +
Sbjct: 482 EGMWIEVKHVKKRDLHTYVSPSLLKRERKVSGTVHKNGNIAGNGNSGSVSPRNPGNTTNR 541
Query: 564 RLDSDSNSLSDKVNNISNNGDQSS-SECTEDNSL-SQVYGLNDSVADSIDNSLDDLSST 620
+ SD N + N+G+Q S + ED SL Q G + + S+D LS+
Sbjct: 542 KRLSDQNQDASIKKRKVNDGEQPSVTHHGEDGSLVVQSCGEDSNSGFSLDEYKQTLSAA 600
>gi|340709674|ref|XP_003393427.1| PREDICTED: poly(A) polymerase gamma-like [Bombus terrestris]
Length = 617
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/556 (66%), Positives = 434/556 (78%), Gaps = 46/556 (8%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T GMT+A++++ P D RT EL E LKPYNV E++ EL+ RME+LSKLN LVK+WI++
Sbjct: 27 TLGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEAELNHRMEILSKLNTLVKQWIRD 86
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
SIA+N+P +VAE+VGGKIYTFGSYRLGVHHKGADIDALCV PRH+ R+DYF+SFFE LK
Sbjct: 87 TSIARNMPSSVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRSDYFASFFELLK 146
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+EVTDLRAVEEAFVPVIKMNFDGIEIDMLFA+L+LKEIPD MDL+DDMLLKNLDQKCV
Sbjct: 147 MQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLDQKCV 206
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEILRLVPNIENFRLALR IKLWAK+HGIYSNVLGYLGGVSWAMLVAR CQ
Sbjct: 207 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQ 266
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA A+TL+ KFFLVFSQWKWPQPVLLK+PDNVNLG+PVWDPRVN++DRYHLMPIITP
Sbjct: 267 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITP 326
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYPQQNSTFNVS+STRTIMQE F+ G +I+E+I GK WDKLFE PNFF KY+HY+VL+
Sbjct: 327 AYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLL 386
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
A S++AEDQLEWCGL+ESK+RHLIG LERNPHI LAHVNPE + P +
Sbjct: 387 ARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITLAHVNPEAF-------------PPL- 432
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAA-NVILNLTYDIQHFTNAVHWQATQSKMMK 506
P G SMWFIGL F + N+ ++LTYDI+ F +++ QA Q ++K
Sbjct: 433 -----------KPEPEGHCSMWFIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLK 481
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK---------SGDQNTSA-----------K 546
DGM IE +HVK+K L Y+ +LK+++K +G+ NT +
Sbjct: 482 DGMWIEAKHVKRKDLHTYVSPSLLKRERKISGNVHKNGNIAGNGNTGGVSPRNQGDLTNR 541
Query: 547 KRKSDQALDELGDKSR 562
KR SDQ+ D G K R
Sbjct: 542 KRLSDQSTDAYGKKRR 557
>gi|350422462|ref|XP_003493171.1| PREDICTED: poly(A) polymerase gamma-like [Bombus impatiens]
Length = 610
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/556 (66%), Positives = 435/556 (78%), Gaps = 46/556 (8%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T GMT+A++++ P D RT EL E LKPYNV E++ EL+ RME+LSKLN LVK+WI++
Sbjct: 23 TLGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEAELNHRMEILSKLNTLVKQWIRD 82
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
SIA+N+P +VA++VGGKIYTFGSYRLGVHHKGADIDALCV PRH+ R+DYF+SFFE LK
Sbjct: 83 TSIARNMPSSVADQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRSDYFASFFELLK 142
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+EVTDLRAVEEAFVPVIKMNFDGIEIDMLFA+L+LKEIPD MDL+DDMLLKNLDQKCV
Sbjct: 143 MQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLDQKCV 202
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEILRLVPNIENFRLALR IKLWAK+HGIYSNVLGYLGGVSWAMLVAR CQ
Sbjct: 203 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQ 262
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA A+TL+ KFFLVFSQWKWPQPVLLK+PDNVNLG+PVWDPRVN++DRYHLMPIITP
Sbjct: 263 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITP 322
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYPQQNSTFNVS+STRTIMQE F+ G +I+E+I GK WDKLFE PNFF KY+HY+VL+
Sbjct: 323 AYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLL 382
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
A S++AEDQLEWCGL+ESK+RHLIG LERNPHI LAHVNPE + P +
Sbjct: 383 ARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITLAHVNPEAF-------------PPL- 428
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAA-NVILNLTYDIQHFTNAVHWQATQSKMMK 506
P G SMWFIGL F + N+ ++LTYDI+ F +++ QA Q ++K
Sbjct: 429 -----------KPEPEGHCSMWFIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLK 477
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK---------SGDQNTSA-----------K 546
DGM IE +HVK+K L Y+ +LK+++K +G+ NT + +
Sbjct: 478 DGMWIEAKHVKRKDLHTYVSPSLLKRERKISGNVHKNGNIAGNGNTGSVSPRNQGDLTNR 537
Query: 547 KRKSDQALDELGDKSR 562
KR SDQ+ D G K R
Sbjct: 538 KRLSDQSTDTYGKKRR 553
>gi|332018332|gb|EGI58937.1| Poly(A) polymerase gamma [Acromyrmex echinatior]
Length = 553
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/521 (69%), Positives = 417/521 (80%), Gaps = 35/521 (6%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T GMT+A++++ P +D+ RT EL E LKPYNV E++EEL+ RME+LSKLN LVK+WI++
Sbjct: 24 TLGMTSAISVAEPKPMDISRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRD 83
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
SIA+N+PP VAE+VGGKIYTFGSYRLGVHHKGADIDALCV PRH+ R DYF+SFF+ LK
Sbjct: 84 TSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRQDYFTSFFDLLK 143
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+EVTDLRAVEEAFVPVIKMNFDGIEIDMLFA+L LKEIPD MDLRDDMLLKNLDQKCV
Sbjct: 144 MQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQKCV 203
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEILRLVPNIENFRLALR IKLWAK+HGIYSNVLGYLGGVSWAMLVAR CQ
Sbjct: 204 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQ 263
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA A+TL+ KFFLVFSQWKWPQPVLLK+PDNVNLG+PVWDPRVNVADRYHLMPIITP
Sbjct: 264 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVADRYHLMPIITP 323
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYPQQNSTFNVS+STRTIMQE F+ G I+E+I GK WDKLFE PNFF KY+HY+VL+
Sbjct: 324 AYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFFGKYKHYIVLL 383
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
A S+SAEDQLEWCGL+ESK+RHLIG LERNPHI LAHVNPE + P +
Sbjct: 384 AKSLSAEDQLEWCGLVESKIRHLIGMLERNPHITLAHVNPEAF-------------PPLN 430
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFI----------AANVILNLTYDIQHFTNAVHW 497
E + SMWFIGL F N+ ++LTYDI+ F + V
Sbjct: 431 PESGKH------------CSMWFIGLAFSKCEKSEKSEKGENINVDLTYDIKSFVDTVER 478
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKS 538
QA Q M K+GM IE +HVK+K L Y+ +LKK++K ++
Sbjct: 479 QAEQINMFKEGMWIEAKHVKRKDLHTYVSPSLLKKERKAEN 519
>gi|321469973|gb|EFX80951.1| hypothetical protein DAPPUDRAFT_318160 [Daphnia pulex]
Length = 630
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/587 (63%), Positives = 436/587 (74%), Gaps = 48/587 (8%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
GMT+A++++ P LDLQ+T EL+E L P+ VSETDEEL+ RMEVL K+N L KEWIKEVS
Sbjct: 26 GMTSAISMAMPKPLDLQKTIELSEALVPHGVSETDEELNHRMEVLRKVNELAKEWIKEVS 85
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+ KN+P + A+ VGGKIYTFGSYRLGVH+KGADIDALCVAPRHVDR DYF+SF + LK
Sbjct: 86 VQKNMPTSAADHVGGKIYTFGSYRLGVHNKGADIDALCVAPRHVDRVDYFTSFVDLLKKQ 145
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
EVT+LRAVEEAFVPVIKMNFDGIE+DMLFARLALKEIPD+MDL+DDMLLKNLD KCVRS
Sbjct: 146 PEVTELRAVEEAFVPVIKMNFDGIELDMLFARLALKEIPDNMDLKDDMLLKNLDPKCVRS 205
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNGCRVTDEILRLVPNI+NFRLALR IKLWAKKHGIYSNVLGYLGGVSWAMLVAR CQLY
Sbjct: 206 LNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNVLGYLGGVSWAMLVARTCQLY 265
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNAAA+TLV KFFLVFS+W+WPQPVLLK PDNVNL +PVWDPRVNV+DRYHLMPIITPAY
Sbjct: 266 PNAAAATLVQKFFLVFSKWEWPQPVLLKPPDNVNLNYPVWDPRVNVSDRYHLMPIITPAY 325
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
PQQNSTFNVS STR +MQEEF+QG ++E+I GK WDKLFE PNFF KY+H++VLIAS
Sbjct: 326 PQQNSTFNVSCSTRAVMQEEFRQGFNMTEEIMTGKASWDKLFEPPNFFVKYKHFIVLIAS 385
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAE 449
S S EDQLEW GL+ESK+RHLI LERN HI LAH+NPE Y
Sbjct: 386 SSSVEDQLEWVGLVESKIRHLILALERNDHITLAHINPEQY------------------- 426
Query: 450 GKEEGGENTSPPVSGVASMWFIGLDFIAANVI-LNLTYDIQHFTNAVHWQATQSKMMKDG 508
+ P +++MWFIGL F + ++LT DIQ FT VH QA+ +K +KDG
Sbjct: 427 ------DPVQPEPDTISTMWFIGLVFKKTESLNIDLTQDIQAFTGQVHRQASTAKTVKDG 480
Query: 509 MKIEVRHVKKKQLSEYLPAHMLKKDKK----------------TKSGDQNTSAKKRKSDQ 552
+I+ +HVK+KQLS YLP+ L + K+ T +KR SD
Sbjct: 481 RRIDAKHVKRKQLSSYLPSTFLLRTKRVGGMSLSTSTGSLSNGTPPVATFAQPRKRPSDA 540
Query: 553 ALDELGDK---SRPRLDSDSNSLSDKVNN---ISNNGDQSSSECTED 593
ALD + K +R D N D+ + I++N D SS +D
Sbjct: 541 ALDAVMMKKVRTRESADGTRNLEGDECRSPFVINSNDDSCSSLSVDD 587
>gi|357621141|gb|EHJ73080.1| poly a polymerase [Danaus plexippus]
Length = 615
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/609 (58%), Positives = 448/609 (73%), Gaps = 15/609 (2%)
Query: 2 TFTQHSNSMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVS 61
+ T H + S HQ+ Q T GMT+A++++ P +D+++T EL E L P+ V
Sbjct: 8 SHTNHQANASKSNEHQN----QQNLKTLGMTSAISMAGPKPIDIEKTNELKESLVPFGVF 63
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGA 121
E++ E+ RMEVL L+ LV++WI++ S+ KN+PP+VA+ VGG IYTFGSYRLGVHH+GA
Sbjct: 64 ESEAEMHHRMEVLGSLHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGA 123
Query: 122 DIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAR 181
DIDALCVAPRH+DR+DYF SF+E LK +V DLRAVE+AFVPVIKMNFDGIEID+LFAR
Sbjct: 124 DIDALCVAPRHIDRSDYFQSFYELLKEQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFAR 183
Query: 182 LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAK 241
LALKEIPD DLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVP+I FRL LR IKLWAK
Sbjct: 184 LALKEIPDSFDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPDINTFRLTLRAIKLWAK 243
Query: 242 KHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN 301
+HGIYSN LGYLGGVSWAMLVAR CQLYPNA +TL+ KFFLVFSQWKWPQPVLLK PD+
Sbjct: 244 RHGIYSNTLGYLGGVSWAMLVARTCQLYPNALPATLLHKFFLVFSQWKWPQPVLLKPPDS 303
Query: 302 VNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIY 361
VNLGFPVWDPRVN++DRYHLMPIITPAYPQQNSTFNVS STRT++ EEF+ G I+++I
Sbjct: 304 VNLGFPVWDPRVNMSDRYHLMPIITPAYPQQNSTFNVSSSTRTVIMEEFRLGLAITDEIM 363
Query: 362 NGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHIN 421
GK W++LFE NFF++Y+H++VL+ASS + DQL WCGL+ESK+RHLI LERN HI
Sbjct: 364 LGKCGWERLFEAANFFSRYKHFIVLLASSANTLDQLPWCGLVESKIRHLITTLERNQHIT 423
Query: 422 LAHVNPECYTDTTGVIANGS------GSPEITAE-GKEEGGENTSPPVSGVASMWFIGLD 474
+AHVNPECY NG G+P T E G E + V+ V SMWFIGL
Sbjct: 424 IAHVNPECYNSVPLNTNNGHPLALPPGTPVQTEEHGAAEVKNDKGEIVANVCSMWFIGLV 483
Query: 475 FIAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
F NV ++LTYDI FT AVH+QA + ++++GM IE RHV++KQL +YL +L+++K
Sbjct: 484 FDKTNVNVDLTYDISSFTKAVHYQAENTNVLREGMTIEARHVRRKQLHQYLSPSLLRREK 543
Query: 535 KTKSGDQ----NTSAKKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSEC 590
K ++ +T KR S+ + DE+ S + SN V N ++ ++S +
Sbjct: 544 VNKRKNETLAVHTKKAKRVSESSADEVSVLSYTEDSNSSNMYEVNVQNGAHQEQKTSEKV 603
Query: 591 TEDNSLSQV 599
+S S +
Sbjct: 604 DRGSSSSGI 612
>gi|347969786|ref|XP_003436462.1| AGAP013207-PA [Anopheles gambiae str. PEST]
gi|333469270|gb|EGK97235.1| AGAP013207-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/515 (67%), Positives = 421/515 (81%), Gaps = 21/515 (4%)
Query: 25 APVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEW 84
A T GMT+A++ + P D+Q+T+EL + L+P+NV E +EEL+ RME+L+KLN LVK+W
Sbjct: 18 ATKTLGMTSAISTAEPKPEDIQKTKELEKSLEPFNVFEAEEELNHRMEILAKLNTLVKQW 77
Query: 85 IKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFE 144
+++VSI+KN+P +AEK+GGKIYTFGSYRLGVHHKGADIDALCVAPR+++RADYF SFFE
Sbjct: 78 VRDVSISKNMPEAMAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERADYFGSFFE 137
Query: 145 KLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQ 204
LK EVT+ RAVEEAFVPVIKMNFDGIEID+LFARLALKEIPD+ DLRDDMLLKNLDQ
Sbjct: 138 LLKQQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDQ 197
Query: 205 KCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVAR 264
K VRSLNGCRVTDEILRLVPNI+NFRLALRTIKLWAK+HGIYSN LGY GGVSWAMLVAR
Sbjct: 198 KSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRHGIYSNSLGYFGGVSWAMLVAR 257
Query: 265 ICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPI 324
CQLYPNA A+TLV KFFLVFS+WKWPQPVLLK+PDNVNLGF VWDPRVNV DR+HLMPI
Sbjct: 258 TCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPI 317
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL 384
ITPAYPQQNSTFNVS STR +M EF +G I++DI GK MW+KLFE P+FF +YRH++
Sbjct: 318 ITPAYPQQNSTFNVSSSTRKVMLMEFNRGMQITDDIMMGKQMWEKLFEAPSFFYRYRHFI 377
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY---TDTTGVIANGS 441
VL+ +S +A+D LEWCGL+ESK+R+LI NLERN HINLAHVNP+CY + NG
Sbjct: 378 VLLVTSSNADDHLEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQHEQNSATTLNG- 436
Query: 442 GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQAT 500
A+GK + S+WFIGL+F + N+ ++LT IQ FT++VH A
Sbjct: 437 ------ADGKP----------TPFCSLWFIGLEFERSENLNVDLTESIQSFTDSVHKHAV 480
Query: 501 QSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
K++KDGMKIE RHV++KQL++YL ++LK+++K
Sbjct: 481 HIKLLKDGMKIEARHVRRKQLTQYLDPNLLKRERK 515
>gi|270004464|gb|EFA00912.1| hypothetical protein TcasGA2_TC003818 [Tribolium castaneum]
Length = 565
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/550 (64%), Positives = 422/550 (76%), Gaps = 29/550 (5%)
Query: 7 SNSMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEE 66
+N Q +K + K ++ P T GMT+A++ +PP DL +T+EL E LKP+ V E+++E
Sbjct: 8 NNGTQNNKENVTQKNDTKIP-TLGMTSAISTAPPKPSDLLKTQELEEALKPFGVFESEQE 66
Query: 67 LSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDAL 126
L+ RM +L KL +LVK+WIK+VSI+KN+P +VAE VGGKIYTFGSYRLGVH++GADIDAL
Sbjct: 67 LNHRMVILGKLYSLVKQWIKDVSISKNMPESVAENVGGKIYTFGSYRLGVHNRGADIDAL 126
Query: 127 CVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKE 186
CVAPRH+ R D+F SF+E LK EVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL LKE
Sbjct: 127 CVAPRHISRNDFFGSFYELLKKQPEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLLLKE 186
Query: 187 IPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIY 246
IPD MDLRDD+LLKNLDQKCVRSLNGCRVTDEILRLVPN++NFRLALR IKLWAK+HGIY
Sbjct: 187 IPDSMDLRDDLLLKNLDQKCVRSLNGCRVTDEILRLVPNVDNFRLALRAIKLWAKRHGIY 246
Query: 247 SNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGF 306
SN LGYLGGVSWAMLVAR CQLYPNAA +TLV KFFLVFSQWKWPQPVLLK+P NVNLGF
Sbjct: 247 SNALGYLGGVSWAMLVARTCQLYPNAAPATLVHKFFLVFSQWKWPQPVLLKQPSNVNLGF 306
Query: 307 PVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM 366
VWDPRVN+ DRYHLMPIITPAYPQQNSTFNVS STR I+ EEFK G +++DI K
Sbjct: 307 AVWDPRVNIQDRYHLMPIITPAYPQQNSTFNVSGSTRQIIMEEFKLGLQLTDDIMLSKQT 366
Query: 367 WDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVN 426
WDKLFE P FF KY+H++VL+ S+ S ED LEWCGL+ESK R LIG LERN HI LAH+N
Sbjct: 367 WDKLFEPPLFFMKYKHFIVLLVSAESPEDHLEWCGLVESKFRLLIGTLERNQHITLAHIN 426
Query: 427 PECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAA-NVILNLT 485
PE ++ E + E + SMWFIGL+F + N+ +NLT
Sbjct: 427 PESFS---------------LLESQRESNTH--------CSMWFIGLEFAKSENLNVNLT 463
Query: 486 YDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKT----KSGDQ 541
+DIQ FT V A M+K+GMK+E RHVK+KQL +YL +LK+++KT KS
Sbjct: 464 FDIQQFTETVQNHALNISMLKEGMKLEARHVKRKQLYQYLSPSLLKRERKTSITVKSQSN 523
Query: 542 NTSAKKRKSD 551
T +KKR SD
Sbjct: 524 GTDSKKRLSD 533
>gi|157109674|ref|XP_001650777.1| poly a polymerase [Aedes aegypti]
gi|108878961|gb|EAT43186.1| AAEL005356-PA [Aedes aegypti]
Length = 780
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/516 (66%), Positives = 412/516 (79%), Gaps = 14/516 (2%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P T GMT+A++L+ P D+Q+T EL + L+PYNV E + EL+ RME+L+KLN L
Sbjct: 80 PTQSNTRTLGMTSAISLAEPKPEDIQKTTELEKALEPYNVFEEESELNHRMEILAKLNTL 139
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFS 140
VK+W+++VSI+KN+P +AEK+GGKIYTFGSYRLGVHHKGADIDALCVAPR+++RADYF
Sbjct: 140 VKQWVRDVSISKNMPEALAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERADYFG 199
Query: 141 SFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLK 200
SFFE LK EVT+ RAVEEAFVPVIKMNFDGIEID+LFARLALKEIPD+ DLRDD LLK
Sbjct: 200 SFFELLKKQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDKLLK 259
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
NLD K VRSLNGCRVTDEILRLVPNI+NFRLALR IKLWAKKHGIYSN LGY GGVSWAM
Sbjct: 260 NLDPKSVRSLNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNSLGYFGGVSWAM 319
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYH 320
LVAR CQLYPNA A+TLV KFFLVFS+WKWPQPVLLK+PD VNLGF VWDPRVNV DR+H
Sbjct: 320 LVARTCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFH 379
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKY 380
LMPIITPAYPQQNSTFNVS STR +M EF +G I+++I K WDKLFE P+FF KY
Sbjct: 380 LMPIITPAYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLSKAGWDKLFEAPSFFFKY 439
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANG 440
RH++VL+ +S +A+D LEWCGL+ESK+R+LI NLERN HINLAHVNP+C+
Sbjct: 440 RHFIVLLVTSNNADDHLEWCGLVESKIRYLILNLERNQHINLAHVNPKCFE--------- 490
Query: 441 SGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQA 499
+ E E+ S + S+WFIGL+F + N+ ++LT IQ FT++VH A
Sbjct: 491 ----QHEQNQTERQRESDGSRASTLCSLWFIGLEFERSENLNVDLTESIQSFTDSVHKHA 546
Query: 500 TQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
K++KDGMKIE RHV++KQLS+YL ++LK+++K
Sbjct: 547 VHIKLLKDGMKIEARHVRRKQLSQYLDPNLLKRERK 582
>gi|194755527|ref|XP_001960043.1| GF13172 [Drosophila ananassae]
gi|190621341|gb|EDV36865.1| GF13172 [Drosophila ananassae]
Length = 835
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/610 (59%), Positives = 449/610 (73%), Gaps = 20/610 (3%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
GMT+A++L+ P DLQRT EL L+PYNV E+ +EL+ RME+L+KLN LVK+W+KE+S
Sbjct: 30 GMTSAISLAEPRPEDLQRTEELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEIS 89
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
++KN+P + AEK+GGKIYTFGSYRLGVHHKGADIDALCVAPR+++R DYF SFFE LK
Sbjct: 90 VSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERTDYFQSFFEVLKKQ 149
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+LKEIPDD DLRDD LL+NLD + VRS
Sbjct: 150 PEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRS 209
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNGCRVTDEIL LVPNIENFRLALRTIKLWAKKHGIYSN LGY GGV+WAMLVAR CQLY
Sbjct: 210 LNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLY 269
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNAAA+TLV KFFLVFS+WKWP PVLLK PDNVNL F VWDPRVN +DRYHLMPIITPAY
Sbjct: 270 PNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAY 329
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
PQQNSTFNVS ST+ ++ EF +G I+++I G+ WD+LFE P+FF +YRH++VL+ +
Sbjct: 330 PQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWDRLFEAPSFFYRYRHFIVLLVN 389
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAE 449
S +A+D LEWCGL+ESKVR LIGNLERNPHI LAHVNP+C+ G AN S + +
Sbjct: 390 SQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANSSQNNSGNED 449
Query: 450 G-KEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQATQSKMMKD 507
K+ G +S + SMWFIGL+F + N+ ++LT IQ+FT V KM+K+
Sbjct: 450 DLKQSQGSQSSVTSAPFCSMWFIGLEFERSENLNVDLTESIQNFTEHVMMHGVNIKMLKE 509
Query: 508 GMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRLDS 567
GM I+ RHVK+KQLS YL A LK+++K+ N + +R RL +
Sbjct: 510 GMTIDARHVKRKQLSLYLDADFLKRERKSMESHNN-----------FNNTLLANRKRLST 558
Query: 568 DSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLNDSVADSIDNSLDDLSSTSPHPTPP 627
+ D + +G QSS D S ++++ L++S+ + N+ DL + + PT P
Sbjct: 559 ELAQSQDSL----PSGQQSSGNRGRD-SGAKIHRLSESLTEENSNASSDLGAGT--PTTP 611
Query: 628 VKVLSDCFNY 637
+ N+
Sbjct: 612 TAAQMNAPNF 621
>gi|170031421|ref|XP_001843584.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
gi|167869844|gb|EDS33227.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
Length = 661
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/561 (63%), Positives = 430/561 (76%), Gaps = 37/561 (6%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T GMT+A++L+ P D +T EL + L+PYNV E + EL+ RME+LSKLN LVK+W+++
Sbjct: 31 TLGMTSAISLAEPKPEDHTKTVELQKALEPYNVFEDESELNHRMEILSKLNTLVKQWVRD 90
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VSI+KN+P +AEK+GGKIYTFGSYRLGVHHKGADIDALCVAPR+++R DYF SFFE LK
Sbjct: 91 VSISKNMPEALAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERQDYFGSFFELLK 150
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
EVT+ RAVEEAFVPVIKMNFDGIEID+LFARLALKEIPD+ DLRDDMLLKNLD K V
Sbjct: 151 KQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDPKSV 210
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEILRLVPNI+NFRLALR+IKLWAKKHGIYSN LGY GGVSWAMLVAR CQ
Sbjct: 211 RSLNGCRVTDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQ 270
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA A+TLV KFFLVFS+WKWPQPVLLK+PD VNLGF VWDPRVNV DR+HLMPIITP
Sbjct: 271 LYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITP 330
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYPQQNSTFNVS STR +M EF +G I+++I GK WDKLFE P+FF KYRH++VL+
Sbjct: 331 AYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLGKAGWDKLFEAPSFFFKYRHFIVLL 390
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
+S +A+D LEWCGL+ESK+R+LI NLERN HINLAHVNP+C+ + G
Sbjct: 391 VTSNNADDHLEWCGLVESKIRYLIQNLERNLHINLAHVNPKCFEQQEQNQKDDGG----- 445
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQATQSKMMK 506
EGG+ T + S+WFIGL+F + N+ ++LT IQ+FT+AVH A K++K
Sbjct: 446 -----EGGKTT------LCSLWFIGLEFERSENLNVDLTESIQNFTDAVHKHAVHIKVLK 494
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK---------------SGDQNTSA-----K 546
DGMKIE RHV++KQL++YL ++LK+++K + NTS +
Sbjct: 495 DGMKIEARHVRRKQLNQYLDPNLLKRERKNSDSGLGSTALNTSGGAAAGNNTSGSGTTLR 554
Query: 547 KRKSDQALDELGDKSRPRLDS 567
KR+S +AL + R DS
Sbjct: 555 KRQSSEALQAAVASKKGRNDS 575
>gi|242024112|ref|XP_002432474.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
gi|212517907|gb|EEB19736.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
Length = 625
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/564 (63%), Positives = 430/564 (76%), Gaps = 33/564 (5%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T G+T+A++L+ P D+Q+T+EL E LKP+NV E+D EL+ RMEVLSKLNNLVKEWI +
Sbjct: 29 TLGVTSAISLALPKISDIQKTKELEEALKPFNVFESDAELNFRMEVLSKLNNLVKEWIID 88
Query: 88 VSI-AKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
+S+ KN+P VAE+VGGKIYTFGSYRLGVH KGADIDALCVAPRH+DR+DYF+SF+E L
Sbjct: 89 ISVNQKNMPKNVAEQVGGKIYTFGSYRLGVHQKGADIDALCVAPRHIDRSDYFTSFYELL 148
Query: 147 KTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKC 206
K EV+ LR+VE AFVPVIKMNFDGIEID+LFARLALKEIPDDMDL+DD LLKNLDQKC
Sbjct: 149 KEQKEVSQLRSVENAFVPVIKMNFDGIEIDLLFARLALKEIPDDMDLKDDYLLKNLDQKC 208
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARIC 266
VRSLNGCRVTDEILRLVPN ENFRLALR IKLWAKKH +YSN LGYLGGVSWAMLVAR C
Sbjct: 209 VRSLNGCRVTDEILRLVPNKENFRLALRVIKLWAKKHRVYSNALGYLGGVSWAMLVARTC 268
Query: 267 QLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIIT 326
QLYPNA A+TLV KFFLVFS+WKWPQPVLLK+PD +NL FPVWDPRVNV+DRYHLMPIIT
Sbjct: 269 QLYPNAVAATLVHKFFLVFSKWKWPQPVLLKQPDTLNLNFPVWDPRVNVSDRYHLMPIIT 328
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVL 386
PAYPQQNSTFNVS+STR+IMQ+E K G +I+EDI GK W+KLFET +FF+KYRHY+VL
Sbjct: 329 PAYPQQNSTFNVSLSTRSIMQDELKLGLSITEDIMLGKCGWEKLFETSHFFSKYRHYIVL 388
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEI 446
+ SS S EDQLEWCGL+ESK+R L+GNLERN HINLAHVNP+ +
Sbjct: 389 LLSSNSPEDQLEWCGLVESKIRLLVGNLERNHHINLAHVNPDSFQ--------------- 433
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGLDFI-AANVILNLTYDIQHFTNAVHWQATQSKMM 505
+ P + + +MWFIG+ F N+ ++LTYDI FT+ V QA S +
Sbjct: 434 ---------QPQEPDSNVLCTMWFIGVVFAKTGNLNVDLTYDIMSFTDTVVRQARASNIW 484
Query: 506 KDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRL 565
K+GMK+ ++VK+K+L+ YL +LKK+K+ + + K Q +K R
Sbjct: 485 KEGMKVVAKYVKRKELTSYLSPSVLKKEKRLNTTPNASPGSKNGGVQE----KNKKRKMA 540
Query: 566 DSDSNSLSDKVNNISNN---GDQS 586
++ S ++ K + N GD+S
Sbjct: 541 ETTSGPMAKKPRAVDENACHGDES 564
>gi|195335951|ref|XP_002034618.1| GM19819 [Drosophila sechellia]
gi|194126588|gb|EDW48631.1| GM19819 [Drosophila sechellia]
Length = 814
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/600 (59%), Positives = 443/600 (73%), Gaps = 14/600 (2%)
Query: 8 NSMQTSKPHQ--DGKPQSQAPVT--YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSET 63
NS T + H +G S P GMT+A++L+ P DLQRT EL L+PYNV E+
Sbjct: 3 NSEPTHRQHHQHNGNSTSGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFES 62
Query: 64 DEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADI 123
+EL+ RME+L+KLN LVK+W+KE+S++KN+P + AEK+GGKIYTFGSYRLGVHHKGADI
Sbjct: 63 QDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADI 122
Query: 124 DALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
DALCVAPR+++R DYF SFFE LK EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+
Sbjct: 123 DALCVAPRNIERTDYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLS 182
Query: 184 LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
LKEIPDD DLRDD LL+NLD + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKH
Sbjct: 183 LKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKH 242
Query: 244 GIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN 303
GIYSN LGY GGV+WAMLVAR CQLYPNAAA+TLV KFFLVFS+WKWP PVLLK PDNVN
Sbjct: 243 GIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVN 302
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG 363
L F VWDPRVN +DRYHLMPIITPAYPQQNSTFNVS ST+ ++ EF +G I+++I G
Sbjct: 303 LRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLG 362
Query: 364 KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLA 423
+ W++LFE P+FF +YRH++VL+ +S +A+D LEWCGL+ESKVR LIGNLERNPHI LA
Sbjct: 363 RIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALA 422
Query: 424 HVNPECYTDTTGVIANGSGSPEITAEG-KEEGGENTSPPVSGVASMWFIGLDF-IAANVI 481
HVNP+C+ G AN S + + K+ G ++ + SMWFIGL+F + N+
Sbjct: 423 HVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 482
Query: 482 LNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQ 541
++LT IQ+FT V KM+K+GM I+ RHVK+KQLS YL + LK+++K+
Sbjct: 483 VDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKSMESHN 542
Query: 542 N-----TSAKKRKSD---QALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTED 593
N + +KR S Q+ D L +P + K+ +S++ + +S + D
Sbjct: 543 NFNNTLLANRKRLSTELAQSQDPLPPGQQPSSGNRGRDSGAKIQRLSDSLTEENSNASSD 602
>gi|442624286|ref|NP_001261097.1| hiiragi, isoform D [Drosophila melanogaster]
gi|440214537|gb|AGB93629.1| hiiragi, isoform D [Drosophila melanogaster]
Length = 827
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/600 (59%), Positives = 443/600 (73%), Gaps = 14/600 (2%)
Query: 8 NSMQTSKPHQ--DGKPQSQAPVT--YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSET 63
NS T + H +G S P GMT+A++L+ P DLQRT EL L+PYNV E+
Sbjct: 3 NSEPTHRQHHQHNGNSTSGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFES 62
Query: 64 DEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADI 123
+EL+ RME+L+KLN LVK+W+KE+S++KN+P + AEK+GGKIYTFGSYRLGVHHKGADI
Sbjct: 63 QDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADI 122
Query: 124 DALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
DALCVAPR+++R DYF SFFE LK EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+
Sbjct: 123 DALCVAPRNIERTDYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLS 182
Query: 184 LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
LKEIPDD DLRDD LL+NLD + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKH
Sbjct: 183 LKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKH 242
Query: 244 GIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN 303
GIYSN LGY GGV+WAMLVAR CQLYPNAAA+TLV KFFLVFS+WKWP PVLLK PDNVN
Sbjct: 243 GIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVN 302
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG 363
L F VWDPRVN +DRYHLMPIITPAYPQQNSTFNVS ST+ ++ EF +G I+++I G
Sbjct: 303 LRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLG 362
Query: 364 KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLA 423
+ W++LFE P+FF +YRH++VL+ +S +A+D LEWCGL+ESKVR LIGNLERNPHI LA
Sbjct: 363 RIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALA 422
Query: 424 HVNPECYTDTTGVIANGSGSPEITAEG-KEEGGENTSPPVSGVASMWFIGLDF-IAANVI 481
HVNP+C+ G AN S + + K+ G ++ + SMWFIGL+F + N+
Sbjct: 423 HVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 482
Query: 482 LNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQ 541
++LT IQ+FT V KM+K+GM I+ RHVK+KQLS YL + LK+++K+
Sbjct: 483 VDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKSMESHN 542
Query: 542 N-----TSAKKRKSD---QALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTED 593
N + +KR S Q+ D L +P + K+ +S++ + +S + D
Sbjct: 543 NFNNTLLANRKRLSTELAQSQDPLPPGQQPSSGNRGRDSGAKIQRLSDSLTEENSNASSD 602
>gi|195584945|ref|XP_002082256.1| GD25311 [Drosophila simulans]
gi|194194265|gb|EDX07841.1| GD25311 [Drosophila simulans]
Length = 815
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/600 (59%), Positives = 443/600 (73%), Gaps = 14/600 (2%)
Query: 8 NSMQTSKPHQ--DGKPQSQAPVT--YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSET 63
NS T + H +G S P GMT+A++L+ P DLQRT EL L+PYNV E+
Sbjct: 3 NSEPTHRQHHQHNGNSTSGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFES 62
Query: 64 DEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADI 123
+EL+ RME+L+KLN LVK+W+KE+S++KN+P + AEK+GGKIYTFGSYRLGVHHKGADI
Sbjct: 63 QDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADI 122
Query: 124 DALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
DALCVAPR+++R DYF SFFE LK EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+
Sbjct: 123 DALCVAPRNIERTDYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLS 182
Query: 184 LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
LKEIPDD DLRDD LL+NLD + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKH
Sbjct: 183 LKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKH 242
Query: 244 GIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN 303
GIYSN LGY GGV+WAMLVAR CQLYPNAAA+TLV KFFLVFS+WKWP PVLLK PDNVN
Sbjct: 243 GIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVN 302
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG 363
L F VWDPRVN +DRYHLMPIITPAYPQQNSTFNVS ST+ ++ EF +G I+++I G
Sbjct: 303 LRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLG 362
Query: 364 KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLA 423
+ W++LFE P+FF +YRH++VL+ +S +A+D LEWCGL+ESKVR LIGNLERNPHI LA
Sbjct: 363 RIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALA 422
Query: 424 HVNPECYTDTTGVIANGSGSPEITAEG-KEEGGENTSPPVSGVASMWFIGLDF-IAANVI 481
HVNP+C+ G AN S + + K+ G ++ + SMWFIGL+F + N+
Sbjct: 423 HVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 482
Query: 482 LNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQ 541
++LT IQ+FT V KM+K+GM I+ RHVK+KQLS YL + LK+++K+
Sbjct: 483 VDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKSMESHN 542
Query: 542 N-----TSAKKRKSD---QALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTED 593
N + +KR S Q+ D L +P + K+ +S++ + +S + D
Sbjct: 543 NFNNTLLANRKRLSTELAQSQDPLPPGQQPSSGNRGRDSGAKIQRLSDSLTEENSNASSD 602
>gi|195380742|ref|XP_002049128.1| GJ21414 [Drosophila virilis]
gi|194143925|gb|EDW60321.1| GJ21414 [Drosophila virilis]
Length = 880
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/537 (64%), Positives = 423/537 (78%), Gaps = 11/537 (2%)
Query: 12 TSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRM 71
T+ G+P Q GMT+A++L+ P DLQRT EL++ L+PYNV E+ +EL+ RM
Sbjct: 26 TTSAGGGGQPAKQ----LGMTSAISLAEPRAEDLQRTEELSKSLEPYNVFESQDELNHRM 81
Query: 72 EVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPR 131
E+L+KLN LVK+W+KE+S++KN+P AEK+GGKIYTFGSYRLGVHHKGADIDALCVAPR
Sbjct: 82 EILAKLNTLVKQWVKEISVSKNMPEAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPR 141
Query: 132 HVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDM 191
+++R DYF SFFE LK EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+LKEIPDD
Sbjct: 142 NIERTDYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDF 201
Query: 192 DLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLG 251
DLRDD LLKNLD + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKHGIYSN LG
Sbjct: 202 DLRDDNLLKNLDPRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLG 261
Query: 252 YLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDP 311
Y GGV+WAMLVAR CQLYPNAAA+TLV KFFLVFS+WKWP PVLLK PDNVNL FPVWDP
Sbjct: 262 YFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDP 321
Query: 312 RVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLF 371
RVN +DRYHLMPIITPAYPQQNSTFNVS ST+ ++ EF +G +I+++I G+ WD+LF
Sbjct: 322 RVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMSITDEIMLGRVSWDRLF 381
Query: 372 ETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYT 431
E P+FF +YRH++VL+ +S +A+D LEWCGL+ESKVR LIGNLERNPHI LAHVNP+C+
Sbjct: 382 EAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIVLAHVNPKCFE 441
Query: 432 DTTGVIA-----NGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLT 485
G + N SG+ E + +++ + T+ + S+WFIGL+F + N+ ++LT
Sbjct: 442 LKKGAASANNSQNNSGNEEDLKQQQQQPAQ-TAVTTAPFCSLWFIGLEFERSENLNIDLT 500
Query: 486 YDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQN 542
IQ+FT V KM+K+GM I+ RH+K+KQLS YL A LK+++K+ N
Sbjct: 501 ESIQNFTEHVIMHGLNIKMLKEGMAIDARHLKRKQLSLYLDADFLKRERKSMESHNN 557
>gi|195487053|ref|XP_002091755.1| GE13836 [Drosophila yakuba]
gi|194177856|gb|EDW91467.1| GE13836 [Drosophila yakuba]
Length = 820
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/541 (63%), Positives = 420/541 (77%), Gaps = 6/541 (1%)
Query: 8 NSMQTSKPHQ--DGKPQSQAPVT--YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSET 63
NS T + H +G S P GMT+A++L+ P DLQRT +L L+PYNV E+
Sbjct: 3 NSEPTHRQHHQHNGNSTSGGPPAKQLGMTSAISLAEPRPEDLQRTDDLRGSLEPYNVFES 62
Query: 64 DEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADI 123
+EL+ RME+L+KLN LVK+W+KE+S++KN+P + AEK+GGKIYTFGSYRLGVHHKGADI
Sbjct: 63 QDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADI 122
Query: 124 DALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
DALCVAPR+++R DYF SFFE LK EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+
Sbjct: 123 DALCVAPRNIERTDYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLS 182
Query: 184 LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
LKEIPDD DLRDD LL+NLD + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKH
Sbjct: 183 LKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKH 242
Query: 244 GIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN 303
GIYSN LGY GGV+WAMLVAR CQLYPNAAA+TLV KFFLVFS+WKWP PVLLK PDNVN
Sbjct: 243 GIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVN 302
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG 363
L F VWDPRVN +DRYHLMPIITPAYPQQNSTFNVS ST+ ++ EF +G I+++I G
Sbjct: 303 LRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLG 362
Query: 364 KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLA 423
+ W++LFE P+FF +YRH++VL+ +S +A+D LEWCGL+ESKVR LIGNLERNPHI LA
Sbjct: 363 RIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALA 422
Query: 424 HVNPECYTDTTGVIANGSGSPEITAEG-KEEGGENTSPPVSGVASMWFIGLDF-IAANVI 481
HVNP+C+ G AN S + + K+ G ++ + SMWFIGL+F + N+
Sbjct: 423 HVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGSQSAVTSAPFCSMWFIGLEFERSENLN 482
Query: 482 LNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQ 541
++LT IQ+FT V KM+K+GM I+ RHVK+KQLS YL + LK+++K+
Sbjct: 483 VDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKSMESHN 542
Query: 542 N 542
N
Sbjct: 543 N 543
>gi|17985991|ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster]
gi|24655907|ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster]
gi|116007728|ref|NP_001036562.1| hiiragi, isoform C [Drosophila melanogaster]
gi|7110522|gb|AAF36978.1|AF231704_1 poly A polymerase [Drosophila melanogaster]
gi|9453846|dbj|BAB03279.1| poly A polymerase [Drosophila melanogaster]
gi|21626946|gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster]
gi|21626947|gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster]
gi|25012374|gb|AAN71296.1| RE09914p [Drosophila melanogaster]
gi|113194668|gb|ABI31107.1| hiiragi, isoform C [Drosophila melanogaster]
gi|211938509|gb|ACJ13151.1| FI03258p [Drosophila melanogaster]
gi|220942518|gb|ACL83802.1| hrg-PA [synthetic construct]
gi|220952732|gb|ACL88909.1| hrg-PA [synthetic construct]
Length = 659
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/600 (59%), Positives = 443/600 (73%), Gaps = 14/600 (2%)
Query: 8 NSMQTSKPHQ--DGKPQSQAPVT--YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSET 63
NS T + H +G S P GMT+A++L+ P DLQRT EL L+PYNV E+
Sbjct: 3 NSEPTHRQHHQHNGNSTSGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFES 62
Query: 64 DEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADI 123
+EL+ RME+L+KLN LVK+W+KE+S++KN+P + AEK+GGKIYTFGSYRLGVHHKGADI
Sbjct: 63 QDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADI 122
Query: 124 DALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
DALCVAPR+++R DYF SFFE LK EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+
Sbjct: 123 DALCVAPRNIERTDYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLS 182
Query: 184 LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
LKEIPDD DLRDD LL+NLD + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKH
Sbjct: 183 LKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKH 242
Query: 244 GIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN 303
GIYSN LGY GGV+WAMLVAR CQLYPNAAA+TLV KFFLVFS+WKWP PVLLK PDNVN
Sbjct: 243 GIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVN 302
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG 363
L F VWDPRVN +DRYHLMPIITPAYPQQNSTFNVS ST+ ++ EF +G I+++I G
Sbjct: 303 LRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLG 362
Query: 364 KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLA 423
+ W++LFE P+FF +YRH++VL+ +S +A+D LEWCGL+ESKVR LIGNLERNPHI LA
Sbjct: 363 RIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALA 422
Query: 424 HVNPECYTDTTGVIANGSGSPEITAEG-KEEGGENTSPPVSGVASMWFIGLDF-IAANVI 481
HVNP+C+ G AN S + + K+ G ++ + SMWFIGL+F + N+
Sbjct: 423 HVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 482
Query: 482 LNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQ 541
++LT IQ+FT V KM+K+GM I+ RHVK+KQLS YL + LK+++K+
Sbjct: 483 VDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKSMESHN 542
Query: 542 N-----TSAKKRKSD---QALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTED 593
N + +KR S Q+ D L +P + K+ +S++ + +S + D
Sbjct: 543 NFNNTLLANRKRLSTELAQSQDPLPPGQQPSSGNRGRDSGAKIQRLSDSLTEENSNASSD 602
>gi|195151552|ref|XP_002016711.1| GL11728 [Drosophila persimilis]
gi|194110558|gb|EDW32601.1| GL11728 [Drosophila persimilis]
Length = 904
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/520 (65%), Positives = 412/520 (79%), Gaps = 6/520 (1%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G+P Q GMT+A++L+ P DLQRT L L+P+NV E+ EEL+ RME+L+KLN
Sbjct: 35 GQPAKQ----LGMTSAISLAEPKPADLQRTENLRASLEPFNVFESQEELNHRMEILAKLN 90
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADY 138
LVK+W+KE+S++KN+P + AEK+GGKIYTFGSYRLGVHHKGADIDALCVAPR+++RADY
Sbjct: 91 TLVKQWVKEMSVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERADY 150
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F SFFE LK EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+LKEIPDD DLRDD L
Sbjct: 151 FQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNL 210
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L+NLD + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKHGIYSN LGY GGV+W
Sbjct: 211 LRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTW 270
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR CQLYPNA A+TLV KFFLVFS+WKWP PVLLK PDNVNL F VWDPRVN +DR
Sbjct: 271 AMLVARTCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDR 330
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITPAYPQQNSTFNVS ST+ +M EF +G I+++I G+ W++LFE P+FF
Sbjct: 331 YHLMPIITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSFFY 390
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIA 438
+YRH++VL+ +S +A+D LEWCGL+ESK+R LIGNLERNPHI LAHVNP+C+ G A
Sbjct: 391 RYRHFIVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESA 450
Query: 439 NGSGSPEITAEGKEEGGENTSPPVSG-VASMWFIGLDF-IAANVILNLTYDIQHFTNAVH 496
N S + + ++ N + S SMWFIGL+F + N+ ++LT IQ+FT V
Sbjct: 451 NNSQNNSGNEDDLKQPPPNQASVTSAPFCSMWFIGLEFERSENLNVDLTESIQNFTEHVI 510
Query: 497 WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKT 536
KM+K+GM I+ RHVK+KQL+ YL A LK+++K+
Sbjct: 511 MHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRERKS 550
>gi|194881425|ref|XP_001974840.1| GG20896 [Drosophila erecta]
gi|190658027|gb|EDV55240.1| GG20896 [Drosophila erecta]
Length = 818
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/526 (64%), Positives = 414/526 (78%), Gaps = 6/526 (1%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G P Q GMT+A++L+ P DLQRT EL L+P+NV E+ +EL+ RME+L+KLN
Sbjct: 24 GPPAKQ----LGMTSAISLAEPRPEDLQRTDELRGSLEPFNVFESQDELNHRMEILAKLN 79
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADY 138
LVK+W+KE+S++KN+P + AEK+GGKIYTFGSYRLGVHHKGADIDALCVAPR+++R DY
Sbjct: 80 TLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERTDY 139
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F SFFE LK EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+LKEIPDD DLRDD L
Sbjct: 140 FQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNL 199
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L+NLD + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKHGIYSN LGY GGV+W
Sbjct: 200 LRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTW 259
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR CQLYPNAAA+TLV KFFLVFS+WKWP PVLLK PDNVNL F VWDPRVN +DR
Sbjct: 260 AMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDR 319
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITPAYPQQNSTFNVS ST+ ++ EF +G I+++I G+ W++LFE P+FF
Sbjct: 320 YHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRISWERLFEAPSFFY 379
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIA 438
+YRH++VL+ +S +A+D LEWCGL+ESKVR LIGNLERNPHI LAHVNP+C+ G A
Sbjct: 380 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFRKGQSA 439
Query: 439 NGSGSPEITAEG-KEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVH 496
N S + + K+ G ++ + SMWFIGL+F + N+ ++LT IQ+FT V
Sbjct: 440 NNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLNVDLTESIQNFTEHVT 499
Query: 497 WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQN 542
KM+K+GM I+ RHVK+KQLS YL + LK+++K+ N
Sbjct: 500 MHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKSMESHNN 545
>gi|198459613|ref|XP_001361433.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
gi|198136742|gb|EAL26011.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
Length = 902
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/520 (65%), Positives = 412/520 (79%), Gaps = 6/520 (1%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G+P Q GMT+A++L+ P DLQRT L L+P+NV E+ EEL+ RME+L+KLN
Sbjct: 34 GQPAKQ----LGMTSAISLAEPKPADLQRTENLRASLEPFNVFESQEELNHRMEILAKLN 89
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADY 138
LVK+W+KE+S++KN+P + AEK+GGKIYTFGSYRLGVHHKGADIDALCVAPR+++RADY
Sbjct: 90 TLVKQWVKEMSVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERADY 149
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F SFFE LK EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+LKEIPDD DLRDD L
Sbjct: 150 FQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNL 209
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L+NLD + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKHGIYSN LGY GGV+W
Sbjct: 210 LRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTW 269
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR CQLYPNA A+TLV KFFLVFS+WKWP PVLLK PDNVNL F VWDPRVN +DR
Sbjct: 270 AMLVARTCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDR 329
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITPAYPQQNSTFNVS ST+ +M EF +G I+++I G+ W++LFE P+FF
Sbjct: 330 YHLMPIITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSFFY 389
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIA 438
+YRH++VL+ +S +A+D LEWCGL+ESK+R LIGNLERNPHI LAHVNP+C+ G A
Sbjct: 390 RYRHFIVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESA 449
Query: 439 NGSGSPEITAEGKEEGGENTSPPVSG-VASMWFIGLDF-IAANVILNLTYDIQHFTNAVH 496
N S + + ++ N + S SMWFIGL+F + N+ ++LT IQ+FT V
Sbjct: 450 NNSQNNSGNEDDLKQPPPNQASVTSAPFCSMWFIGLEFERSENLNVDLTESIQNFTEHVI 509
Query: 497 WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKT 536
KM+K+GM I+ RHVK+KQL+ YL A LK+++K+
Sbjct: 510 MHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRERKS 549
>gi|21064419|gb|AAM29439.1| RE25878p [Drosophila melanogaster]
Length = 659
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/600 (59%), Positives = 442/600 (73%), Gaps = 14/600 (2%)
Query: 8 NSMQTSKPHQ--DGKPQSQAPVT--YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSET 63
NS T + H +G S P GMT+A++L+ P DLQRT EL L+PYNV E+
Sbjct: 3 NSEPTHRQHHQHNGNSTSGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFES 62
Query: 64 DEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADI 123
+EL+ RME+L+KLN LVK+W+KE+S++KN+P + AEK+GGKIYTFGSYRLGVHHKGADI
Sbjct: 63 QDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADI 122
Query: 124 DALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
DALCVAPR+++R DYF SFFE LK EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+
Sbjct: 123 DALCVAPRNIERTDYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLS 182
Query: 184 LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
LKEIPDD DLRDD LL+NLD + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKH
Sbjct: 183 LKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKH 242
Query: 244 GIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN 303
GIYSN LGY GGV+WAMLVAR CQLYPNAAA+TLV KFFLVFS+WKWP PVLLK PDNVN
Sbjct: 243 GIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVN 302
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG 363
L F VWDPRVN +DRYHLMPIITPAYPQQNSTFNVS ST+ ++ EF +G I+++I G
Sbjct: 303 LRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLG 362
Query: 364 KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLA 423
+ W++LFE P+FF +YRH++VL+ +S +A+D LEWCGL+ESKVR LI NLERNPHI LA
Sbjct: 363 RIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLISNLERNPHIALA 422
Query: 424 HVNPECYTDTTGVIANGSGSPEITAEG-KEEGGENTSPPVSGVASMWFIGLDF-IAANVI 481
HVNP+C+ G AN S + + K+ G ++ + SMWFIGL+F + N+
Sbjct: 423 HVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 482
Query: 482 LNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQ 541
++LT IQ+FT V KM+K+GM I+ RHVK+KQLS YL + LK+++K+
Sbjct: 483 VDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKSMESHN 542
Query: 542 N-----TSAKKRKSD---QALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTED 593
N + +KR S Q+ D L +P + K+ +S++ + +S + D
Sbjct: 543 NFNNTLLANRKRLSTELAQSQDPLPPGQQPSSGNRGRDSGAKIQRLSDSLTEENSNASSD 602
>gi|195057028|ref|XP_001995187.1| GH22767 [Drosophila grimshawi]
gi|193899393|gb|EDV98259.1| GH22767 [Drosophila grimshawi]
Length = 857
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/606 (58%), Positives = 445/606 (73%), Gaps = 27/606 (4%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
GMT+A++L+ P DLQRT EL + L+PYNV E+ +EL+ RME+L+KLN LVK+WIKE+S
Sbjct: 27 GMTSAISLAEPRAEDLQRTGELGKSLEPYNVFESQDELNHRMEILAKLNTLVKQWIKEIS 86
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
++KN+P A+++GGKIYTFGSYRLGVHHKGADIDALCVAPR+++R DYF SFFE LK
Sbjct: 87 VSKNMPEAAADRLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERTDYFQSFFEVLKKQ 146
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+LKEIPDD DLRDD LLKNLD + VRS
Sbjct: 147 PEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPRSVRS 206
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNGCRVTDEIL LVPNIENFRLALR IKLWAKKHGIYSN LGY GGV+WAMLVAR CQLY
Sbjct: 207 LNGCRVTDEILALVPNIENFRLALRAIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLY 266
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNAAA+TLV KFFLVFS+WKWP PVLLK PDNVNL F VWDPRVN +DRYHLMPIITPAY
Sbjct: 267 PNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAY 326
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
PQQNSTFNVS ST+ ++ EF +G +I+++I G+ WD+LFE P+FF +YRH++VL+ +
Sbjct: 327 PQQNSTFNVSESTKKVILTEFNRGMSITDEIMLGRVNWDRLFEAPSFFYRYRHFIVLLVN 386
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIA-----NGSGSP 444
S +A+D LEWCGL+ESKVR LIGNLERNPHI LAHVNP+C+ G + N SG+
Sbjct: 387 SQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFELKKGAVTANNSQNNSGNE 446
Query: 445 E--ITAEGKEEGGENTSPPVSGVA----SMWFIGLDF-IAANVILNLTYDIQHFTNAVHW 497
+ + +++ ++ P S VA S+WFIGL+F + N+ ++LT IQ+FT V
Sbjct: 447 DDLKQQQQQQQQQKDEKPATSTVAAPFCSLWFIGLEFERSENLNIDLTESIQNFTEHVIM 506
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALD-E 556
KM+K+GM I+ RHVK+KQLS YL A LK+++K+ N + + + L E
Sbjct: 507 HGVNIKMLKEGMAIDARHVKRKQLSVYLDADFLKRERKSMESHNNFNTTMLANRKRLSTE 566
Query: 557 LGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLNDSVADSIDNSLDD 616
L P S + SN G +S ++V+ L++S+ + N+ D
Sbjct: 567 LAQSQDPLPPGQQQSAAS-----SNRGRESG---------AKVHRLSESLNEDNSNASSD 612
Query: 617 LSSTSP 622
+ P
Sbjct: 613 MGGVMP 618
>gi|195431638|ref|XP_002063835.1| GK15696 [Drosophila willistoni]
gi|194159920|gb|EDW74821.1| GK15696 [Drosophila willistoni]
Length = 872
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/620 (58%), Positives = 446/620 (71%), Gaps = 34/620 (5%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G+P A GMT+A++L+ P DLQRT EL L+PYNV E+ +EL+ RME+L+KLN
Sbjct: 33 GQP---AAKQLGMTSAISLAEPRPEDLQRTGELRGSLEPYNVFESQDELNHRMEILAKLN 89
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADY 138
LVK+W+KE+S++KN+P AEK+GGKIYTFGSYRLGVHHKGADIDALCVAPR+++R DY
Sbjct: 90 TLVKQWVKEISVSKNMPEAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERTDY 149
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F SFFE LK EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+LKEIPDD DLRDD L
Sbjct: 150 FQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNL 209
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
LKNLD + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKHGIYSN LGY GGV+W
Sbjct: 210 LKNLDPRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTW 269
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR CQLYPNAAA+TLV KFFLVFS+WKWP PVLLK PDNVNL FPVWDPRVN +DR
Sbjct: 270 AMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDR 329
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITPAYPQQNSTFNVS ST+ ++ EF +G I+++I G+ W++LFE P+FF
Sbjct: 330 YHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRVPWERLFEAPSFFY 389
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIA 438
+YRH++VL+ +S +A+D LEWCGL+ESKVR LIGNLERN HI LAHVNP+C+ G A
Sbjct: 390 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNAHIALAHVNPKCFEFKKGQSA 449
Query: 439 NGSGSPEITAEGKEEGGE--------------NTSPPVSGVASMWFIGLDFIAA-NVILN 483
N S + G E+ + ++ S SMWFIGL+F + N+ ++
Sbjct: 450 NSSQN----NSGNEDDPKQTQQQQTNNQANAAASTVTSSPFCSMWFIGLEFERSDNLNID 505
Query: 484 LTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNT 543
LT IQ+FT V KM+K+GM I+ RHVK+KQLS YL A LK+++K+ N
Sbjct: 506 LTESIQNFTEHVIMHGVNIKMLKEGMTIDARHVKRKQLSLYLDADFLKRERKSMENHNN- 564
Query: 544 SAKKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDN-SLSQVYGL 602
+ +R RL ++ + D + QSS+ S ++V+ L
Sbjct: 565 ----------FNNTLLANRKRLSTELSQSQDPLPGQQQQQQQSSAGSNRGRESGAKVHRL 614
Query: 603 NDSVADSIDNSLDDLSSTSP 622
++S+ + N+ DL + SP
Sbjct: 615 SESLNEETSNTSSDLGAVSP 634
>gi|195124015|ref|XP_002006489.1| GI18544 [Drosophila mojavensis]
gi|193911557|gb|EDW10424.1| GI18544 [Drosophila mojavensis]
Length = 664
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/601 (58%), Positives = 441/601 (73%), Gaps = 25/601 (4%)
Query: 10 MQTSKPHQDGKPQS--------QAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVS 61
M S+P Q + Q+ Q G+T+A++L+ P DLQRT EL++ L+PYNV
Sbjct: 1 MWNSEPTQRQQQQNGNSTSGSGQTTKQLGITSAISLAEPRAEDLQRTEELSKSLEPYNVF 60
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGA 121
ET EEL+ RME+L+KLN LVK+W+K++S++KN+P AEK+GGKIYTFGSYRLGVHHKGA
Sbjct: 61 ETQEELNHRMEILAKLNTLVKQWVKDISVSKNMPEAAAEKLGGKIYTFGSYRLGVHHKGA 120
Query: 122 DIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAR 181
DIDALCVAPR+++R+DYF SFFE LK EVT+ R+VEEAFVPVIKMNFDG+EID+LFAR
Sbjct: 121 DIDALCVAPRNIERSDYFQSFFEILKKQPEVTECRSVEEAFVPVIKMNFDGVEIDLLFAR 180
Query: 182 LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAK 241
L+LKEIPDD DLRDD LLKNLD + VRSLNGCRVTDEIL LVPNIENFRLALR IKLWAK
Sbjct: 181 LSLKEIPDDFDLRDDNLLKNLDPRSVRSLNGCRVTDEILALVPNIENFRLALRAIKLWAK 240
Query: 242 KHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN 301
+HGIYSN LGY GGV+WAMLVAR CQLYPNAAA+TLV KFFLVFS+WKWP PVLLK DN
Sbjct: 241 RHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHLDN 300
Query: 302 VNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIY 361
VNL F VWDPRVN +DRYHLMPIITPAYPQQNSTFNVS ST+ ++ EF +G +I+++I
Sbjct: 301 VNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMSITDEIM 360
Query: 362 NGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHIN 421
G+ WD+LFE P+FF +YRH++VL+ +S +A+D LEWCGL+ESKVR LIGNLER PHI
Sbjct: 361 LGRVGWDRLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERIPHIV 420
Query: 422 LAHVNPECYTDTTGVIA-----NGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF- 475
LAHVNP+C+ G N SG+ + + + T+P S+WFIGL+F
Sbjct: 421 LAHVNPKCFELKKGAATANNSQNNSGNEDDLKQQSAQAAVTTAP----YCSLWFIGLEFE 476
Query: 476 IAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+ N+ ++LT IQ+FT V+ KM+K+GM I RHVK+KQLS YL A LK+++K
Sbjct: 477 RSENLNIDLTESIQNFTEHVNMHGVNIKMLKEGMSIVARHVKRKQLSVYLDADFLKRERK 536
Query: 536 TKSGDQNTS----AKKRKSDQALDELGDK---SRPRLDSDSNSLSDKVNNISNNGDQSSS 588
+ N + AK+++ L + ++ + PR N + +++ +SS
Sbjct: 537 SMENHNNFNNSMMAKRKRLSSELAQSQEQVPPTNPRGRDSGNKVQRLSESLTEENSNASS 596
Query: 589 E 589
E
Sbjct: 597 E 597
>gi|312381415|gb|EFR27171.1| hypothetical protein AND_06288 [Anopheles darlingi]
Length = 1653
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/562 (61%), Positives = 417/562 (74%), Gaps = 67/562 (11%)
Query: 28 TYGMTTALNLSPPNQLDLQRTREL----AEC-----------------LKPYNVSETDEE 66
T GMT+A++ + P DLQ+T+EL +C L+PYNV E + E
Sbjct: 28 TLGMTSAISTAEPKPEDLQKTQELEKSLGKCGLVREEQYPGLMCQDFPLEPYNVFEAESE 87
Query: 67 LSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDAL 126
L+ RME+L+KLN LVK+W+++VSI++++P AEK+GGKIYTFGSYRLGVHHKGADIDAL
Sbjct: 88 LNHRMEILAKLNTLVKQWVRDVSISRHMPEATAEKLGGKIYTFGSYRLGVHHKGADIDAL 147
Query: 127 CVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKE 186
CVAPR++DR+DYF SFFE LK EVT+ RAVEEAFVPVIKMNFDGIEID+LFARLALKE
Sbjct: 148 CVAPRNIDRSDYFGSFFELLKQQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKE 207
Query: 187 IPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKK---- 242
IPD+ DLRDDMLLKNLDQK VRSLNGCRVTDEILRLVPNI+NFRLALRTIKLWAK+
Sbjct: 208 IPDNFDLRDDMLLKNLDQKSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRKLLP 267
Query: 243 ----------------------------HGIYSNVLGYLGGVSWAMLVARICQLYPNAAA 274
HGIYSN LGY GGVSWAMLVAR CQLYPNA A
Sbjct: 268 HGLISPEGMCDERCFNVRVAFCICLVTGHGIYSNSLGYFGGVSWAMLVARTCQLYPNAVA 327
Query: 275 STLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNS 334
+TLV KFFLVFS+WKWPQPVLLK+PDNVNLGF VWDPRVNV DR+HLMPIITPAYPQQNS
Sbjct: 328 ATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNS 387
Query: 335 TFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAE 394
TFNVS STR +M EF +G I++DI GK MWDKLFE P+FF +YRH++VL+ +S +A+
Sbjct: 388 TFNVSSSTRKVMLMEFNRGMQITDDIMMGKQMWDKLFEAPSFFYRYRHFIVLLVTSSNAD 447
Query: 395 DQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEG 454
D LEWCGL+ESK+R+LI NLERN HINLAHVNP+CY +P T G
Sbjct: 448 DHLEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYE-------QHEQNPAATLNAG--G 498
Query: 455 GENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEV 513
G + + + S+WFIGL+F N+ ++LT IQ FT++VH A ++KDGMKIE
Sbjct: 499 GADANQTPAAFCSLWFIGLEFERTENLNVDLTESIQSFTDSVHKHA----LLKDGMKIEA 554
Query: 514 RHVKKKQLSEYLPAHMLKKDKK 535
RHV++KQL+ YL A++LK+++K
Sbjct: 555 RHVRRKQLASYLDANLLKRERK 576
>gi|345492821|ref|XP_001602912.2| PREDICTED: poly(A) polymerase gamma-like [Nasonia vitripennis]
Length = 605
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/587 (60%), Positives = 424/587 (72%), Gaps = 79/587 (13%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T GMT+A++++ P DL RT EL E LKPYNV E++EEL+ RME+LSKLN LVK+WI++
Sbjct: 24 TLGMTSAISMAEPKLSDLSRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRD 83
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
SIA+N+PP VA++VGGKIYTFGSYRLGVHHKGADIDALCV PRH++R+DYFSSFF+ LK
Sbjct: 84 TSIARNMPPNVADQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHINRSDYFSSFFDLLK 143
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+ EVTDLRAVEEA+VPVIKMNFDGIEIDMLFA+LALKE+PD MDLRDDMLLKNLDQKCV
Sbjct: 144 SQMEVTDLRAVEEAYVPVIKMNFDGIEIDMLFAKLALKEVPDSMDLRDDMLLKNLDQKCV 203
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEILRLVPNIENFRLALR IKLWAKK+GIYSNVLGYLGGVSWAMLVAR CQ
Sbjct: 204 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKKNGIYSNVLGYLGGVSWAMLVARTCQ 263
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA A+TL+ KFFLVFSQWKWPQPVLLK P+NVNLGF VWDPRV ++D
Sbjct: 264 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKSPENVNLGFQVWDPRVTMSD---------- 313
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
RTIMQE F+ G I+E+I GK WDKLFE PNFF KYRHY+VL+
Sbjct: 314 ---------------RTIMQEAFETGLAITEEIIMGKASWDKLFEPPNFFGKYRHYIVLL 358
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
ASS +AEDQLEWCGL+ESK+RHLIG LERNP+I LAH+NPE + P +
Sbjct: 359 ASSSTAEDQLEWCGLVESKIRHLIGTLERNPNITLAHINPESF-------------PPL- 404
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAA-NVILNLTYDIQHFTNAVHWQATQSKMMK 506
K E G++ SMWFIGL F N+ ++LT DI+ F QA Q K+ K
Sbjct: 405 ---KPEAGKH--------VSMWFIGLTFKKGENLNIDLTMDIKSFVETTERQAEQIKLFK 453
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQ---NTSA--------------KKRK 549
+GM IE +HVK+K LS Y+ A+ +K+++KT S Q N+S +KRK
Sbjct: 454 NGMTIEAKHVKRKDLSNYIAANQIKRERKTSSSTQRNGNSSGNGGVSPRNQGDQTLRKRK 513
Query: 550 SDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSL 596
SDQ+L E DK R DS+ + QS+++ ED +L
Sbjct: 514 SDQSL-ESNDKKRKIQDSEQQ----------HQHPQSTTQQKEDGTL 549
>gi|432902553|ref|XP_004077012.1| PREDICTED: poly(A) polymerase gamma-like [Oryzias latipes]
Length = 834
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/520 (62%), Positives = 399/520 (76%), Gaps = 28/520 (5%)
Query: 22 QSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
Q Q P YG+T+A++L+PP ++D + TR+L E ++P+ V E +EEL+ R+ VL KLNN
Sbjct: 12 QQQPPQKHYGITSAISLAPPREIDHEYTRKLCEAMQPFGVFEDEEELNHRLAVLGKLNNF 71
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFS 140
VKEWI E+S KN+PP+ VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+F
Sbjct: 72 VKEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFQ 131
Query: 141 SFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLK 200
SFFEKLK +E+ DLRAVE+AFVPVIK FDGIEID+LFARLAL+ IPD++DLR D +LK
Sbjct: 132 SFFEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILK 191
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
NLD +C+RSLNGCRVTDEIL LVPN ENFRL LR IKLWAK+ GIYSN+LG+LGGVSWAM
Sbjct: 192 NLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAM 251
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYH 320
LVAR CQLYPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRVN +DRYH
Sbjct: 252 LVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYH 311
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKY 380
LMPIITPAYPQQNST+NVS STRTIM EEFK G +++++I GK W KLFE P+FF KY
Sbjct: 312 LMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWPKLFEPPSFFQKY 371
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANG 440
+HY+VL AS+ + E+ LEW GL+ESK+R L+GNLERN +I LAHVNP+ + +
Sbjct: 372 KHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS------- 424
Query: 441 SGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVH 496
KE EN MWFIG+ F A +V ++LTYDIQ FT+ V+
Sbjct: 425 ----------KENRSEN------DFVCMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVY 468
Query: 497 WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKT 536
QA M+KDGMKIE HVKKKQL +YLP ++++ K++
Sbjct: 469 RQANNINMLKDGMKIEATHVKKKQLHQYLPPELVQRKKRS 508
>gi|427788767|gb|JAA59835.1| Putative polya polymerase [Rhipicephalus pulchellus]
Length = 817
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/522 (63%), Positives = 400/522 (76%), Gaps = 26/522 (4%)
Query: 15 PHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVL 74
P Q G T GMT+A++ +PP DLQRT EL E L+ + + E++EEL+ RMEVL
Sbjct: 26 PQQIGSATGIVDKTLGMTSAISTAPPKPSDLQRTDELEETLRQFGLFESEEELAHRMEVL 85
Query: 75 SKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD 134
SK+N LVK+WI EVSI KN+P +VAE VGGKIYTFGSYRLGVH KGADID LCVAPRH++
Sbjct: 86 SKINQLVKKWIYEVSIKKNMPSSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHIE 145
Query: 135 RADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLR 194
R+D+F+SF E L+ +EV DLRAVEEAFVPVIKM FDGIE+DMLFARLALK+IP+D DLR
Sbjct: 146 RSDFFASFVELLRQQEEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLR 205
Query: 195 DDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLG 254
D +LKNLDQKCVRSLNGCRVTDEIL LVPN E FRLALR IKLWAK+HG+YSNVLGYLG
Sbjct: 206 DVNILKNLDQKCVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLG 265
Query: 255 GVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVN 314
GVSWAMLVAR CQLYPNAAA+TLV KFFLVFSQW WP+PVLLK+P+ LGFPVWDPRVN
Sbjct: 266 GVSWAMLVARTCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVN 325
Query: 315 VADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETP 374
VADR+HLMPIITPAYPQQNSTFNVS+ST TIM++EFKQG I+++I ++ W KLFE P
Sbjct: 326 VADRFHLMPIITPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPP 385
Query: 375 NFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTT 434
NFF KY+H++VL+AS+ S E LEW GL+ESK+R LI NLER+P+I +AHVNPE +
Sbjct: 386 NFFGKYKHFIVLMASTQSKEHHLEWYGLVESKIRILISNLERHPYIAIAHVNPESF---- 441
Query: 435 GVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTN 493
P EG + + SMWFIGL F +V ++LTYD + F +
Sbjct: 442 ---------PPSEPEGDK------------LQSMWFIGLQFNKTEHVNIDLTYDTRSFVD 480
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V QAT + K M++++++V++++L YLP +L + KK
Sbjct: 481 TVKRQATAINIFKQDMEVDIKYVRRRELVRYLPQSVLNRCKK 522
>gi|427797219|gb|JAA64061.1| Putative polya polymerase, partial [Rhipicephalus pulchellus]
Length = 759
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/522 (63%), Positives = 400/522 (76%), Gaps = 26/522 (4%)
Query: 15 PHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVL 74
P Q G T GMT+A++ +PP DLQRT EL E L+ + + E++EEL+ RMEVL
Sbjct: 77 PQQIGSATGIVDKTLGMTSAISTAPPKPSDLQRTDELEETLRQFGLFESEEELAHRMEVL 136
Query: 75 SKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD 134
SK+N LVK+WI EVSI KN+P +VAE VGGKIYTFGSYRLGVH KGADID LCVAPRH++
Sbjct: 137 SKINQLVKKWIYEVSIKKNMPSSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHIE 196
Query: 135 RADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLR 194
R+D+F+SF E L+ +EV DLRAVEEAFVPVIKM FDGIE+DMLFARLALK+IP+D DLR
Sbjct: 197 RSDFFASFVELLRQQEEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLR 256
Query: 195 DDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLG 254
D +LKNLDQKCVRSLNGCRVTDEIL LVPN E FRLALR IKLWAK+HG+YSNVLGYLG
Sbjct: 257 DVNILKNLDQKCVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLG 316
Query: 255 GVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVN 314
GVSWAMLVAR CQLYPNAAA+TLV KFFLVFSQW WP+PVLLK+P+ LGFPVWDPRVN
Sbjct: 317 GVSWAMLVARTCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVN 376
Query: 315 VADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETP 374
VADR+HLMPIITPAYPQQNSTFNVS+ST TIM++EFKQG I+++I ++ W KLFE P
Sbjct: 377 VADRFHLMPIITPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPP 436
Query: 375 NFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTT 434
NFF KY+H++VL+AS+ S E LEW GL+ESK+R LI NLER+P+I +AHVNPE +
Sbjct: 437 NFFGKYKHFIVLMASTQSKEHHLEWYGLVESKIRILISNLERHPYIAIAHVNPESF---- 492
Query: 435 GVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTN 493
P EG + + SMWFIGL F +V ++LTYD + F +
Sbjct: 493 ---------PPSEPEGDK------------LQSMWFIGLQFNKTEHVNIDLTYDTRSFVD 531
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V QAT + K M++++++V++++L YLP +L + KK
Sbjct: 532 TVKRQATAINIFKQDMEVDIKYVRRRELVRYLPQSVLNRCKK 573
>gi|41054866|ref|NP_956915.1| poly(A) polymerase gamma [Danio rerio]
gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamma [Danio rerio]
Length = 744
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/521 (62%), Positives = 399/521 (76%), Gaps = 28/521 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T++++L+ P ++D T++L E +KP+ V E ++EL+ R+ VL KLN+ VKEWI E+
Sbjct: 21 YGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFVKEWISEI 80
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+ VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R D+FSSFFEKLK
Sbjct: 81 SESKNLPPSAVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERTDFFSSFFEKLKR 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
DE+ DLRAVE+AFVPVIK FDGIEID+LFARLAL+ IPD++DLR D LL+NLD +C+R
Sbjct: 141 HDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN ENFRL LR IKLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 201 SLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 261 YPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRTIM EEFK G T++++I GK W KLFE PNFF +YRHY+VL A
Sbjct: 321 YPQQNSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKADWSKLFEPPNFFQQYRHYIVLTA 380
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN +I LAHVNP+ + +
Sbjct: 381 SASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS--------------- 425
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKM 504
KE EN SMWFIG+ F + V ++LTYDIQ FT+ V+ QA+ M
Sbjct: 426 --KENRNEN------DFVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINM 477
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
+KDGM IE HVKKKQL YLP ++++ KK+ GD N S+
Sbjct: 478 LKDGMTIEATHVKKKQLHHYLPPELVQRKKKSL-GDINRSS 517
>gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/521 (62%), Positives = 400/521 (76%), Gaps = 28/521 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T++++L+ P ++D T++L E +KP+ V E+++EL+ R+ VL KLN+ VKEWI E+
Sbjct: 21 YGITSSISLAFPREIDHIYTQKLTEAMKPFGVFESEDELNHRLAVLGKLNSFVKEWIAEI 80
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+P + VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R D+FSSFFEKLK
Sbjct: 81 SESKNLPLSAVVNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERTDFFSSFFEKLKR 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+DE+ DLRAVE+AFVPVIK FDGIEID+LFARLAL+ IPD++DLR D LL+NLD +C+R
Sbjct: 141 LDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN ENFRL LR IKLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 201 SLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 261 YPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRTIM EEFK G T++++I GK W KLFE PNFF KY+HY+VL A
Sbjct: 321 YPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNFFQKYKHYIVLTA 380
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN +I LAHVNP+ + +
Sbjct: 381 SASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS--------------- 425
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKM 504
KE EN SMWFIG+ F + V ++LTYDIQ FT+ V+ QA+ M
Sbjct: 426 --KENHNENE------FVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINM 477
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
+KDGM IE HVKKKQL YLP ++++ KK+ GD N S+
Sbjct: 478 LKDGMTIEATHVKKKQLHHYLPPELVQRKKKSL-GDINRSS 517
>gi|410900416|ref|XP_003963692.1| PREDICTED: poly(A) polymerase gamma-like [Takifugu rubripes]
Length = 861
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/512 (62%), Positives = 394/512 (76%), Gaps = 27/512 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+A++L+PP ++D T++L + ++P+ V E +EEL+ R+ VL KLNN VKEWI E+
Sbjct: 18 YGITSAISLAPPREIDHHYTKKLCDAMQPFGVFEDEEELNHRLAVLGKLNNFVKEWIAEI 77
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S KN+PP+ VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R D+F SFFEKLK
Sbjct: 78 SELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERTDFFQSFFEKLKQ 137
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+E+ DLRAVE+AFVPVIK FDGIEID+LFARLAL IPD++DLR D +LKNLD +C+R
Sbjct: 138 HEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALPSIPDNLDLRGDSILKNLDIRCIR 197
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN ENFRL LR IKLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 198 SLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 257
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 258 YPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPA 317
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRTIM EEFK G +++++I GK W KLFE P+FF KY+HY+VL A
Sbjct: 318 YPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHFFQKYKHYIVLAA 377
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN +I LAHVNP+ + +
Sbjct: 378 SASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS--------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE EN SMWFIG+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 --KENRNEN------DFVSMWFIGIIFKKMENAESVNIDLTYDIQSFTDTVYRQANNINM 474
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKT 536
+K+GMKIE HVKKKQL+ YLP +++K K++
Sbjct: 475 LKNGMKIEATHVKKKQLNLYLPPELVQKKKRS 506
>gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/512 (62%), Positives = 395/512 (77%), Gaps = 27/512 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T++++L+ P ++D T++L E +KP+ V E ++EL+ R+ VL KLN+ VKEWI E+
Sbjct: 21 YGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFVKEWIAEI 80
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+ VGGKI+TFGSYRLGVH KGADIDALCVAPRH++R D+FSSFFEKLK
Sbjct: 81 SDSKNLPPSSVTNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHIERTDFFSSFFEKLKR 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
DE+ DLRAVE+AFVPVIK FDGIEID+LFARLAL+ IPD++DLR D LL+NLD +C+R
Sbjct: 141 HDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN ENFRL LR IKLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 201 SLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 261 YPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRTIM EEFK G T++++I GK W KLFE PNFF KY+HY+VL A
Sbjct: 321 YPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNFFQKYKHYIVLTA 380
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN +I LAHVNP+ + +
Sbjct: 381 SASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS--------------- 425
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKM 504
KE EN SMWFIG+ F + V ++LTYDIQ FT+ V+ QA+ M
Sbjct: 426 --KENHNENE------FVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINM 477
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKT 536
+KDGM IE HVKKKQL YLP+ ++++ KK+
Sbjct: 478 LKDGMTIEATHVKKKQLHHYLPSELVQRKKKS 509
>gi|16306568|ref|NP_075045.2| poly(A) polymerase gamma [Homo sapiens]
gi|332813224|ref|XP_515496.3| PREDICTED: poly(A) polymerase gamma isoform 6 [Pan troglodytes]
gi|397521664|ref|XP_003830910.1| PREDICTED: poly(A) polymerase gamma [Pan paniscus]
gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Neo-poly(A) polymerase; Short=Neo-PAP; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|15080911|gb|AAK83701.1|AF312211_1 neo-poly(A) polymerase [Homo sapiens]
gi|15384858|emb|CAC59751.1| poly(A) polymerase gamma [Homo sapiens]
gi|84202581|gb|AAI11702.1| Poly(A) polymerase gamma [Homo sapiens]
gi|88682947|gb|AAI13748.1| Poly(A) polymerase gamma [Homo sapiens]
gi|119620439|gb|EAX00034.1| poly(A) polymerase gamma, isoform CRA_f [Homo sapiens]
gi|189054448|dbj|BAG37221.1| unnamed protein product [Homo sapiens]
gi|410216568|gb|JAA05503.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410265336|gb|JAA20634.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410295358|gb|JAA26279.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410346708|gb|JAA40709.1| poly(A) polymerase gamma [Pan troglodytes]
Length = 736
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/571 (58%), Positives = 415/571 (72%), Gaps = 31/571 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPR 564
+K+GMKIE HVKKKQL YLPA +L+K KK D N S+ +S + + R
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSR 535
Query: 565 LDSDSNSLSDKVNNISNNGDQSSSECTEDNS 595
D+D+ + N+ ++ D S TE NS
Sbjct: 536 -DTDNGT---PFNSPASKSDSPSVGETERNS 562
>gi|119620435|gb|EAX00030.1| poly(A) polymerase gamma, isoform CRA_b [Homo sapiens]
Length = 743
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/571 (58%), Positives = 415/571 (72%), Gaps = 31/571 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPR 564
+K+GMKIE HVKKKQL YLPA +L+K KK D N S+ +S + + R
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSR 535
Query: 565 LDSDSNSLSDKVNNISNNGDQSSSECTEDNS 595
D+D+ + N+ ++ D S TE NS
Sbjct: 536 -DTDNGT---PFNSPASKSDSPSVGETERNS 562
>gi|157822073|ref|NP_001100714.1| poly(A) polymerase gamma [Rattus norvegicus]
gi|149044811|gb|EDL97997.1| poly(A) polymerase gamma (predicted) [Rattus norvegicus]
Length = 739
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/548 (60%), Positives = 406/548 (74%), Gaps = 31/548 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI ++
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDI 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D V +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGVRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKAN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDE-LGDKSRP 563
+KDGMKIE HVKKKQL YLPA +L+K KK+ S +S + +LD D SR
Sbjct: 476 LKDGMKIEATHVKKKQLHHYLPAEILQKKKKSLSDVSRSSGGLQSKRSSLDSNCLDSSR- 534
Query: 564 RLDSDSNS 571
D+DS +
Sbjct: 535 --DTDSGT 540
>gi|10435509|dbj|BAB14604.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/571 (58%), Positives = 415/571 (72%), Gaps = 31/571 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 16 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 75
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 76 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 135
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 136 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 195
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 196 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 255
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 256 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 315
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 316 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 375
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 376 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 419
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 420 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 472
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPR 564
+K+GMKIE HVKKKQL YLPA +L+K KK D N S+ +S + + R
Sbjct: 473 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSR 532
Query: 565 LDSDSNSLSDKVNNISNNGDQSSSECTEDNS 595
D+D+ + N+ ++ D S TE NS
Sbjct: 533 -DTDNGT---PFNSPASKSDSPSVGETERNS 559
>gi|226494207|ref|NP_766143.2| poly(A) polymerase gamma [Mus musculus]
gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|37589275|gb|AAH59271.1| Poly(A) polymerase gamma [Mus musculus]
gi|73671773|gb|AAZ80292.1| SRP 3'-adenylating protein [Mus musculus]
gi|148675952|gb|EDL07899.1| poly(A) polymerase gamma, isoform CRA_b [Mus musculus]
Length = 739
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/548 (59%), Positives = 406/548 (74%), Gaps = 31/548 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI ++
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDI 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKAN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELG-DKSRP 563
+KDGMKIE HVKKKQL YLPA +L+K KK+ S +S + +LD D SR
Sbjct: 476 LKDGMKIEATHVKKKQLHHYLPAEILQKKKKSLSDVSRSSGGLQSKRSSLDSTCLDSSR- 534
Query: 564 RLDSDSNS 571
D+DS +
Sbjct: 535 --DTDSGT 540
>gi|291386749|ref|XP_002709901.1| PREDICTED: poly(A) polymerase gamma [Oryctolagus cuniculus]
Length = 739
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/538 (60%), Positives = 399/538 (74%), Gaps = 27/538 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSR 562
+K+GMKIE HVKKKQL YLPA +L+K KK D + S + K D SR
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSGLQSKRSSLDSNCLDSSR 533
>gi|297667577|ref|XP_002812053.1| PREDICTED: poly(A) polymerase gamma [Pongo abelii]
Length = 736
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/571 (57%), Positives = 416/571 (72%), Gaps = 31/571 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPR 564
+K+GMKIE HVKKKQL YLPA +L+K KK D + S+ +S ++ + R
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSSGGLQSKRSSLDSSCLDSSR 535
Query: 565 LDSDSNSLSDKVNNISNNGDQSSSECTEDNS 595
D+D+ + N+ ++ D S TE NS
Sbjct: 536 -DTDNGT---PFNSPASKSDSPSVGETERNS 562
>gi|395508015|ref|XP_003758311.1| PREDICTED: poly(A) polymerase gamma [Sarcophilus harrisii]
Length = 763
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/536 (60%), Positives = 403/536 (75%), Gaps = 27/536 (5%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
++Q YG+T+ ++L+ P ++D T++L E +KP+ V E +EEL+ R+ VL KLNNLV
Sbjct: 26 ETQRQKHYGITSPISLASPKEIDHIYTQKLIEAMKPFGVFEDEEELNHRLVVLGKLNNLV 85
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
KEWI E+S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F S
Sbjct: 86 KEWISELSESKNLPPSVVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 145
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
FFEKLK D + +LRA+E+A+VPV+K FDGIEID++FARLA++ + D++DLRDD L++
Sbjct: 146 FFEKLKHQDGIRNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRS 205
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
LD +C+RSLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAML
Sbjct: 206 LDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAML 265
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR CQLYPNAAASTLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRVN +DRYHL
Sbjct: 266 VARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHL 325
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYPQQNST+NVS STRT+M EEFKQG ++ +I GK+ W KL E PNFF KYR
Sbjct: 326 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYR 385
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGS 441
HY+VL AS+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 386 HYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF----------P 435
Query: 442 GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHW 497
G+ E E S SMWF+G+ F A +V ++LTYDIQ FT+ V+
Sbjct: 436 GNKEHYKE-------------SDYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYR 482
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA 553
QA M+K+GMKIE HVKKKQL YLPA +L+K KK D N SA +S ++
Sbjct: 483 QANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLQDINRSASGLQSKRS 538
>gi|395829706|ref|XP_003787987.1| PREDICTED: poly(A) polymerase gamma [Otolemur garnettii]
Length = 741
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/521 (61%), Positives = 395/521 (75%), Gaps = 27/521 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E QLEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEEHQLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
+K+GMKIE HVKKKQL YLPA +L+K KK D + S+
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSS 516
>gi|120952595|ref|NP_991321.2| poly(A) polymerase alpha [Danio rerio]
Length = 723
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/561 (58%), Positives = 406/561 (72%), Gaps = 36/561 (6%)
Query: 7 SNSMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEE 66
++ +QT++P P YG+T+ ++L+PP + DL TR+L E L+P+ V E + E
Sbjct: 6 TSQVQTAQP---------TPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELE 56
Query: 67 LSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDAL 126
L R+ VL KLN LVK WI+EVS AKNIP +V + VGGKI+TFGSYRLGVH KGADIDAL
Sbjct: 57 LQRRILVLGKLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDAL 116
Query: 127 CVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKE 186
CVAPRHV+R D+FSSF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+
Sbjct: 117 CVAPRHVERTDFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQT 176
Query: 187 IPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIY 246
IP+++DLRDD LLKNLD +C+RSLNGCRVTDEIL LVPNIENFRL LR IKLWAK+H IY
Sbjct: 177 IPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIY 236
Query: 247 SNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGF 306
SN+LG+LGGVSWAMLVAR CQLYPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL
Sbjct: 237 SNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNL 296
Query: 307 PVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM 366
PVWDPRV +DRYHLMPIITPAYPQQNST+NVS STR IM EEFK+G I+++I K
Sbjct: 297 PVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKAD 356
Query: 367 WDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVN 426
W KLFE PNFF KY+HY+VL+AS+ + + LEW GL+ESK+R L+GNLE+N I LAHVN
Sbjct: 357 WSKLFEAPNFFQKYKHYIVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVN 416
Query: 427 PECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVIL 482
P+ + G +EG + ++MW IG+ F + N+ +
Sbjct: 417 PQSFP------------------GPKEGNDKEE-----FSTMWVIGIVFKKMEGSENLNV 453
Query: 483 NLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQN 542
+LT+DIQ FT+ V+ QA SKM + MKI HVK+KQL + LP + + K+ S D
Sbjct: 454 DLTFDIQSFTDTVYRQAITSKMFEQDMKITAMHVKRKQLHQLLPEVAIHRSKRKHSSDGV 513
Query: 543 TSAKKRKSDQALDELGDKSRP 563
+ D +LD S P
Sbjct: 514 RAMNDSNLDLSLDSDNSMSVP 534
>gi|311252569|ref|XP_003125156.1| PREDICTED: poly(A) polymerase gamma-like [Sus scrofa]
Length = 741
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/529 (60%), Positives = 398/529 (75%), Gaps = 27/529 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI EV
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA 553
+K+GMKIE HVKKKQL YLPA +L+K KK D S+ +S ++
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVTRSSSGPQSKRS 524
>gi|431912670|gb|ELK14688.1| Poly(A) polymerase gamma [Pteropus alecto]
Length = 741
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/529 (60%), Positives = 398/529 (75%), Gaps = 27/529 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++ +I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA 553
+K+GMKIE HVKKKQL YLPA +L+K KK D N S+ +S ++
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSSGPQSKRS 524
>gi|426335656|ref|XP_004029330.1| PREDICTED: poly(A) polymerase gamma [Gorilla gorilla gorilla]
Length = 736
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/521 (61%), Positives = 395/521 (75%), Gaps = 27/521 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
+K+GMKIE HVKKKQL YLPA +L+K KK D + S+
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSS 516
>gi|126303830|ref|XP_001375093.1| PREDICTED: poly(A) polymerase gamma [Monodelphis domestica]
Length = 748
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/536 (59%), Positives = 402/536 (75%), Gaps = 27/536 (5%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
++Q YG+T+ ++L+ P ++D T++L E +KP+ V E +EEL+ R+ VL KLNNLV
Sbjct: 11 ETQRQKHYGITSPISLASPKEIDHIYTQKLIEAMKPFGVFEDEEELNHRLVVLGKLNNLV 70
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
KEWI E+S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F S
Sbjct: 71 KEWISELSESKNLPPSVVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 130
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
FFEKLK D + +LRA+E+A+VPV+K FDGIEID++FARLA++ + D++DLRDD L++
Sbjct: 131 FFEKLKHQDGIRNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRS 190
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
LD +C+RSLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAML
Sbjct: 191 LDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAML 250
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR CQLYPNAAASTLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRVN +DRYHL
Sbjct: 251 VARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHL 310
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYPQQNST+NVS STRT+M EEFKQG ++ +I GK+ W KL E PNFF KYR
Sbjct: 311 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKSDWSKLLEPPNFFQKYR 370
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGS 441
HY+VL AS+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 371 HYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF----------P 420
Query: 442 GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHW 497
G+ E E S SMWF+G+ F A +V ++LTYDIQ FT+ V+
Sbjct: 421 GNKEHYKE-------------SDYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYR 467
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA 553
QA M+K+GMKIE HVKKKQL YLPA + +K KK D N SA +S ++
Sbjct: 468 QANNINMLKEGMKIEATHVKKKQLHHYLPAEIFQKKKKQSLQDINRSASGLQSKRS 523
>gi|13641252|gb|AAK31791.1| SRP RNA 3' adenylating enzyme/pap2 [Homo sapiens]
Length = 736
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/571 (57%), Positives = 414/571 (72%), Gaps = 31/571 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLASPEEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+ + NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQSEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPR 564
+K+GMKIE HVKKKQL YLPA +L+K KK D N S+ +S + + R
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSR 535
Query: 565 LDSDSNSLSDKVNNISNNGDQSSSECTEDNS 595
D+D+ + N+ ++ D S TE NS
Sbjct: 536 -DTDNGT---PFNSPASKSDSPSVGETERNS 562
>gi|296223786|ref|XP_002757774.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Callithrix jacchus]
Length = 736
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/571 (57%), Positives = 415/571 (72%), Gaps = 31/571 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ + +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGS--------------- 423
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 424 --KEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPR 564
+K+GMKIE HVKKKQL YLPA +L+K KK D + S +S + + R
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSLGGLQSKRLSLDSSCLDSSR 535
Query: 565 LDSDSNSLSDKVNNISNNGDQSSSECTEDNS 595
D+D+ + N+ ++ D S TE NS
Sbjct: 536 -DTDNGT---PFNSPASKSDSPSLGETERNS 562
>gi|344291804|ref|XP_003417620.1| PREDICTED: poly(A) polymerase gamma-like [Loxodonta africana]
Length = 741
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/549 (59%), Positives = 407/549 (74%), Gaps = 32/549 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T +L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTEKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQSISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN ADRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPADRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQ-ALD-ELGDKSR 562
+K+GMKIE HVKKKQL YLP+ L+K KK D + S+ +S + +LD D SR
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPSETLQKKKKQSLSDVSRSSGGLQSKRPSLDGSCLDSSR 535
Query: 563 PRLDSDSNS 571
D+DS +
Sbjct: 536 ---DTDSGT 541
>gi|440911569|gb|ELR61221.1| Poly(A) polymerase gamma, partial [Bos grunniens mutus]
Length = 737
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/529 (60%), Positives = 398/529 (75%), Gaps = 27/529 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI EV
Sbjct: 16 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEV 75
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 76 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 135
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I +++DLRDD L++LD +C+R
Sbjct: 136 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIR 195
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 196 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 255
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 256 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 315
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 316 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 375
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 376 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 419
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 420 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 472
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA 553
+K+GMKIE HVKKKQL YLPA +L+K KK D S+ +S ++
Sbjct: 473 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVTRSSSGPQSKRS 521
>gi|426223633|ref|XP_004005979.1| PREDICTED: poly(A) polymerase gamma [Ovis aries]
Length = 740
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/529 (60%), Positives = 398/529 (75%), Gaps = 27/529 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI EV
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I +++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA 553
+K+GMKIE HVKKKQL YLPA +L+K KK D S+ +S ++
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVTRSSSGPQSKRS 524
>gi|147900391|ref|NP_001091535.1| poly(A) polymerase gamma [Bos taurus]
gi|146186839|gb|AAI40626.1| PAPOLG protein [Bos taurus]
gi|296482594|tpg|DAA24709.1| TPA: poly(A) polymerase gamma [Bos taurus]
Length = 740
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/529 (60%), Positives = 398/529 (75%), Gaps = 27/529 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI EV
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I +++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA 553
+K+GMKIE HVKKKQL YLPA +L+K KK D S+ +S ++
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVTRSSSGPQSKRS 524
>gi|26330928|dbj|BAC29194.1| unnamed protein product [Mus musculus]
Length = 739
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/548 (59%), Positives = 405/548 (73%), Gaps = 31/548 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI ++
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDI 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E NFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPTNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKAN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELG-DKSRP 563
+KDGMKIE HVKKKQL YLPA +L+K KK+ S +S + +LD D SR
Sbjct: 476 LKDGMKIEATHVKKKQLHHYLPAEILQKKKKSLSDVSRSSGGLQSKRSSLDSTCLDSSR- 534
Query: 564 RLDSDSNS 571
D+DS +
Sbjct: 535 --DTDSGT 540
>gi|148675951|gb|EDL07898.1| poly(A) polymerase gamma, isoform CRA_a [Mus musculus]
Length = 650
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/548 (59%), Positives = 405/548 (73%), Gaps = 31/548 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI ++
Sbjct: 76 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDI 135
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 136 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 195
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 196 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 255
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 256 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 315
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 316 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 375
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 376 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 435
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 436 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFP----------------- 478
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
G + SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 479 ------GNKEHHKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 532
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELG-DKSRP 563
+KDGMKIE HVKKKQL YLPA +L+K KK+ S +S + +LD D SR
Sbjct: 533 LKDGMKIEATHVKKKQLHHYLPAEILQKKKKSLSDVSRSSGGLQSKRSSLDSTCLDSSR- 591
Query: 564 RLDSDSNS 571
D+DS +
Sbjct: 592 --DTDSGT 597
>gi|417404307|gb|JAA48913.1| Putative polya polymerase [Desmodus rotundus]
Length = 742
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/521 (61%), Positives = 394/521 (75%), Gaps = 27/521 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++ +I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHYKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
+K+GMKIE HVKKKQL YLPA +L+K KK D N S+
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 516
>gi|403260636|ref|XP_003922768.1| PREDICTED: poly(A) polymerase gamma [Saimiri boliviensis
boliviensis]
Length = 736
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/511 (62%), Positives = 392/511 (76%), Gaps = 27/511 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ + +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGS--------------- 423
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 424 --KEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+K+GMKIE HVKKKQL YLPA +L+K KK
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKK 506
>gi|354473991|ref|XP_003499215.1| PREDICTED: poly(A) polymerase gamma [Cricetulus griseus]
Length = 739
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/514 (62%), Positives = 391/514 (76%), Gaps = 27/514 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI ++
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDI 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE N SMWF+G+ F A V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHNKAN------NYVSMWFLGIIFRRVEHAEGVNIDLTYDIQSFTDTVYRQANIINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKS 538
+KDGMKIE HVKKKQL YLPA +L+K KK+ S
Sbjct: 476 LKDGMKIEATHVKKKQLHHYLPAEILQKKKKSLS 509
>gi|348563534|ref|XP_003467562.1| PREDICTED: poly(A) polymerase gamma [Cavia porcellus]
Length = 741
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/521 (61%), Positives = 395/521 (75%), Gaps = 27/521 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
+K+GMKIE HVKKKQL YLPA +L+K KK D + S+
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQNLSDVSRSS 516
>gi|344245697|gb|EGW01801.1| Poly(A) polymerase gamma [Cricetulus griseus]
Length = 709
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/514 (62%), Positives = 391/514 (76%), Gaps = 27/514 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI ++
Sbjct: 11 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDI 70
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 71 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 130
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 131 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 190
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 191 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 250
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 251 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 310
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 311 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 370
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 371 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 414
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE N SMWF+G+ F A V ++LTYDIQ FT+ V+ QA M
Sbjct: 415 -NKEHNKAN------NYVSMWFLGIIFRRVEHAEGVNIDLTYDIQSFTDTVYRQANIINM 467
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKS 538
+KDGMKIE HVKKKQL YLPA +L+K KK+ S
Sbjct: 468 LKDGMKIEATHVKKKQLHHYLPAEILQKKKKSLS 501
>gi|194220708|ref|XP_001917579.1| PREDICTED: poly(A) polymerase gamma-like [Equus caballus]
Length = 741
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/511 (62%), Positives = 391/511 (76%), Gaps = 27/511 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELTHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+K+GMKIE HVKKKQL YLPA +L+K KK
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKK 506
>gi|410954895|ref|XP_003984095.1| PREDICTED: poly(A) polymerase gamma [Felis catus]
Length = 762
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/521 (61%), Positives = 395/521 (75%), Gaps = 27/521 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 40 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 99
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 100 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 159
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 160 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 219
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 220 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 279
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 280 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 339
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 340 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 399
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 400 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 443
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 444 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 496
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
+K+GMKIE HVKKKQL YLPA +L+K KK D + S+
Sbjct: 497 LKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSS 537
>gi|380815688|gb|AFE79718.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/511 (62%), Positives = 391/511 (76%), Gaps = 27/511 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+K+GMKIE HVKKKQL YLPA +L+K KK
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKK 506
>gi|383413715|gb|AFH30071.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/511 (62%), Positives = 391/511 (76%), Gaps = 27/511 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+K+GMKIE HVKKKQL YLPA +L+K KK
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKK 506
>gi|109102989|ref|XP_001115228.1| PREDICTED: poly(A) polymerase gamma-like [Macaca mulatta]
Length = 736
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/511 (62%), Positives = 390/511 (76%), Gaps = 27/511 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++ +I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKSNWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+K+GMKIE HVKKKQL YLPA +L+K KK
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKK 506
>gi|281354338|gb|EFB29922.1| hypothetical protein PANDA_016961 [Ailuropoda melanoleuca]
Length = 736
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/511 (62%), Positives = 391/511 (76%), Gaps = 27/511 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 16 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 75
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 76 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 135
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 136 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 195
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 196 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 255
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 256 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 315
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 316 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 375
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 376 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 419
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 420 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 472
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+K+GMKIE HVKKKQL YLPA +L+K KK
Sbjct: 473 LKEGMKIEATHVKKKQLHHYLPAEILQKKKK 503
>gi|301783573|ref|XP_002927202.1| PREDICTED: poly(A) polymerase gamma-like [Ailuropoda melanoleuca]
Length = 739
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/511 (62%), Positives = 391/511 (76%), Gaps = 27/511 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+K+GMKIE HVKKKQL YLPA +L+K KK
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKK 506
>gi|355565713|gb|EHH22142.1| hypothetical protein EGK_05354, partial [Macaca mulatta]
gi|355751336|gb|EHH55591.1| hypothetical protein EGM_04830, partial [Macaca fascicularis]
Length = 733
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/511 (62%), Positives = 391/511 (76%), Gaps = 27/511 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 16 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 75
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 76 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 135
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 136 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 195
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 196 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 255
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 256 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 315
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 316 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 375
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 376 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 419
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 420 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 472
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+K+GMKIE HVKKKQL YLPA +L+K KK
Sbjct: 473 LKEGMKIEATHVKKKQLHHYLPAEILQKKKK 503
>gi|73969700|ref|XP_852387.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Canis lupus
familiaris]
Length = 738
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/511 (62%), Positives = 391/511 (76%), Gaps = 27/511 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVT+EIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+K+GMKIE HVKKKQL YLPA +L+K KK
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKK 506
>gi|55727879|emb|CAH90692.1| hypothetical protein [Pongo abelii]
gi|83405193|gb|AAI10907.1| PAPOLG protein [Homo sapiens]
Length = 506
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/511 (62%), Positives = 391/511 (76%), Gaps = 27/511 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+K+GMKIE HVKKKQL YLPA +L+K KK
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEILQKKKK 506
>gi|326921016|ref|XP_003206760.1| PREDICTED: poly(A) polymerase alpha-like [Meleagris gallopavo]
Length = 752
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/557 (59%), Positives = 412/557 (73%), Gaps = 28/557 (5%)
Query: 12 TSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRM 71
TS G Q YG+T+ ++L+ P ++D T++L E LKPY V E +EEL R+
Sbjct: 16 TSPVTTQGSQTQQLQKHYGITSPISLAAPKEIDCMLTQKLIETLKPYGVFEEEEELQRRI 75
Query: 72 EVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPR 131
+L KLNNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPR
Sbjct: 76 LILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPR 135
Query: 132 HVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDM 191
HV+R+D+F+SF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+
Sbjct: 136 HVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDL 195
Query: 192 DLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLG 251
DLRDD LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG
Sbjct: 196 DLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILG 255
Query: 252 YLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDP 311
+LGGVSWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDP
Sbjct: 256 FLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDP 315
Query: 312 RVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLF 371
RVN +DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLF
Sbjct: 316 RVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLF 375
Query: 372 ETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYT 431
E PNFF KY+HY+VL+AS+ + + +LEW GL+ESK+R L+GNLE+N I LAHVNP+ +
Sbjct: 376 EAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF- 434
Query: 432 DTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYD 487
+P+ + +E +MW IGL F + N+ ++LTYD
Sbjct: 435 ----------PAPKENPDKEE------------YRTMWVIGLVFKKTENSENLSVDLTYD 472
Query: 488 IQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAK 546
IQ FT+ V+ QA SKM + MKI RHVK+KQL + LP H+L+K KK + G + T+
Sbjct: 473 IQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQLHQLLPNHVLQKKKKHSTEGVRLTALN 532
Query: 547 KRKSDQALDELGDKSRP 563
D ++D S P
Sbjct: 533 DSSLDLSMDSDNSTSVP 549
>gi|310750335|ref|NP_001185530.1| poly(A) polymerase alpha [Gallus gallus]
Length = 737
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/540 (60%), Positives = 407/540 (75%), Gaps = 28/540 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P + D T++L E LKPY V E +EEL R+ +L KLNNLVKEWI+E+
Sbjct: 19 YGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREI 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F+SF+EKLK
Sbjct: 79 SESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFTSFYEKLKQ 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 139 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF KY+HY+VL+A
Sbjct: 319 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + +LEW GL+ESK+R L+GNLE+N I LAHVNP+ + +P+
Sbjct: 379 SAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF-----------PAPKENP 427
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
+ +E +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM
Sbjct: 428 DKEE------------YRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRP 563
+ MKI RHVK+KQL + LP H+L+K KK + G + T+ D ++D S P
Sbjct: 476 FEMDMKIAARHVKRKQLHQLLPNHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSTSVP 535
>gi|449280702|gb|EMC87938.1| Poly(A) polymerase alpha, partial [Columba livia]
Length = 736
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/511 (63%), Positives = 397/511 (77%), Gaps = 27/511 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P + D T++L E LKPY V E +EEL R+ +L KLNNLVKEWI+E+
Sbjct: 17 YGITSPISLAAPKESDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREI 76
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F+SF+EKLK
Sbjct: 77 SESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFTSFYEKLKQ 136
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 137 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 196
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 197 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 256
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 257 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 316
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF KY+HY+VL+A
Sbjct: 317 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLA 376
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + +LEW GL+ESK+R L+GNLE+N I LAHVNP+ + +P+
Sbjct: 377 SAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF-----------PAPKENP 425
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
+ +E +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM
Sbjct: 426 DKEE------------YRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKM 473
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+ MKI RHVK+KQL + LP+H+L+K KK
Sbjct: 474 FEMDMKIAARHVKRKQLHQLLPSHVLQKKKK 504
>gi|449504503|ref|XP_002200600.2| PREDICTED: poly(A) polymerase alpha [Taeniopygia guttata]
Length = 850
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/540 (60%), Positives = 407/540 (75%), Gaps = 28/540 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P + D T++L E LKPY V E +EEL R+ +L KLNNLVKEWI+E+
Sbjct: 130 YGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREI 189
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F+SF+EKLK
Sbjct: 190 SESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFTSFYEKLKQ 249
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 250 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 309
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 310 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 369
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 370 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 429
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF KY+HY+VL+A
Sbjct: 430 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLA 489
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + +LEW GL+ESK+R L+GNLE+N I LAHVNP+ + +P+
Sbjct: 490 SAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFP-----------APKENP 538
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
+ +E +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM
Sbjct: 539 DKEE------------YRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKM 586
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRP 563
+ MKI RHVK+KQL + LP H+L+K KK + G + T+ D ++D S P
Sbjct: 587 FEMDMKIAARHVKRKQLHQLLPNHVLQKKKKHSTEGIRLTALNDSSLDLSMDSDNSTSVP 646
>gi|260803790|ref|XP_002596772.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
gi|229282032|gb|EEN52784.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
Length = 493
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/516 (62%), Positives = 391/516 (75%), Gaps = 30/516 (5%)
Query: 24 QAPVTY-GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
Q P Y G+T+ ++LS P + D+ +L LKPYNV +T+E L+ RM VL KLN LVK
Sbjct: 1 QTPRKYPGITSPISLSEPTKFDIDLNVKLVNTLKPYNVFDTEEGLTHRMVVLGKLNKLVK 60
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
EWIK+VS+AKN+PP +AE VGGKIYTFGSYRLGVH GADID LCVAPRHVDR+D+FSSF
Sbjct: 61 EWIKQVSLAKNMPPAIAETVGGKIYTFGSYRLGVHGAGADIDTLCVAPRHVDRSDFFSSF 120
Query: 143 FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNL 202
+E LK E TD+R VEEAFVPVIK++FDG+E+D+LFARLAL ++P+D DLR+++LLKNL
Sbjct: 121 YEILKDQKETTDIRGVEEAFVPVIKLDFDGVELDILFARLALPQVPEDQDLREEVLLKNL 180
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
DQ+CVRSLNGCRVTDE+L LVPN ENFRLALR IKLWAK+ G+YSNVLG+LGGVSWAMLV
Sbjct: 181 DQRCVRSLNGCRVTDEMLHLVPNRENFRLALRAIKLWAKRRGVYSNVLGFLGGVSWAMLV 240
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPD-NVNLGFPVWDPRVNVADRYHL 321
AR CQLYPNA ASTL+ KFFLVFS+W+WPQPVLLK+ D N LGF VWDPR N DR+HL
Sbjct: 241 ARTCQLYPNAIASTLIHKFFLVFSRWEWPQPVLLKQIDENNRLGFQVWDPRTNPMDRFHL 300
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYPQQNST+NVS+STR IMQEEFK G ++++I+ GK WDKLFE +FF KY+
Sbjct: 301 MPIITPAYPQQNSTYNVSLSTRAIMQEEFKIGLQVTQEIFEGKATWDKLFEPGSFFGKYK 360
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGS 441
HY+VL S+ S E LEW GL+ESKVR LIGNLER +I LAHVNP+ Y
Sbjct: 361 HYIVLSTSATSKEHHLEWVGLVESKVRILIGNLERTAYIALAHVNPKQY----------- 409
Query: 442 GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF--IAANVILNLTYDIQHFTNAVHWQA 499
P + +P + WFIGL F I I +LT++IQ FT+ VH QA
Sbjct: 410 --PPL------------NPQEDVFVTNWFIGLQFNKIEGGNI-DLTFEIQSFTDTVHRQA 454
Query: 500 TQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+ +K+GMKIE R V++KQL EYLP +LK +KK
Sbjct: 455 ISNGTLKEGMKIEARSVRRKQLGEYLPPSLLKFNKK 490
>gi|218847770|ref|NP_001136382.1| poly(A) polymerase alpha [Xenopus (Silurana) tropicalis]
gi|197246240|gb|AAI68811.1| Unknown (protein for MGC:188992) [Xenopus (Silurana) tropicalis]
Length = 732
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/521 (62%), Positives = 399/521 (76%), Gaps = 29/521 (5%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G QSQ TYG+T+ ++L+ P D T++L E LKP+ V E +EEL R+ +L KLN
Sbjct: 9 GSQQSQK--TYGITSPISLATPKDTDCTLTQKLIETLKPFGVFEEEEELQHRILILGKLN 66
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADY 138
NLVKEWI+E+S KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+
Sbjct: 67 NLVKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDF 126
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
FSSF+EKLK +EV DLR+VEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD L
Sbjct: 127 FSSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSL 186
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
LKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVSW
Sbjct: 187 LKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSW 246
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DR
Sbjct: 247 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 306
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I GK W KLF+ PNFF
Sbjct: 307 YHLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQ 366
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIA 438
KY+HY++L+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 367 KYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------- 419
Query: 439 NGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNA 494
+P E +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 420 ----APSENTEKEE------------FRTMWVIGLVFKKMENSENLSVDLTYDIQSFTDT 463
Query: 495 VHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM ++ MKI HVK+KQL + LP+H+L K KK
Sbjct: 464 VYRQAINSKMFENEMKIAAMHVKRKQLHQLLPSHVLPKKKK 504
>gi|10433147|dbj|BAB13919.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/506 (62%), Positives = 387/506 (76%), Gaps = 27/506 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHML 530
+K+GMKIE HVKKKQL YLPA +L
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEIL 501
>gi|241643377|ref|XP_002411054.1| poly(A) polymerase, putative [Ixodes scapularis]
gi|215503685|gb|EEC13179.1| poly(A) polymerase, putative [Ixodes scapularis]
Length = 492
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/492 (63%), Positives = 387/492 (78%), Gaps = 26/492 (5%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T GMT+ ++++PP D+ RTR+L + L+ + + E+ +EL+ RMEVLSK+N LVK+WI +
Sbjct: 26 TLGMTSPISMAPPKASDVARTRDLEDTLRQFGLFESADELAHRMEVLSKINELVKQWIYD 85
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS+ KN+PP+VAE VGGKIYTFGSYRLGVH KGADID LCVAPRHVDR D+FSSF E L+
Sbjct: 86 VSVKKNMPPSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHVDRTDFFSSFVELLR 145
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+EV DLRAVEEAFVPVIKM F GIE+DMLFARLALK+IP+ DLRD +LKNLD KCV
Sbjct: 146 QQEEVKDLRAVEEAFVPVIKMTFAGIELDMLFARLALKDIPEQQDLRDVNILKNLDPKCV 205
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEIL LVPN E FRL+LR IKLWAKKHG+YSNVLGYLGGVSWAMLVAR CQ
Sbjct: 206 RSLNGCRVTDEILHLVPNRETFRLSLRAIKLWAKKHGVYSNVLGYLGGVSWAMLVARTCQ 265
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNAAA+TLV KFFLVFSQW WP+PVLLK+P+ LGFPVWDPR+NVADR+HLMPIITP
Sbjct: 266 LYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEENKLGFPVWDPRINVADRFHLMPIITP 325
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYPQQNSTFNVS+STRTIM++EFKQG I+++I G+T W KLFE PNFF KY+H++VL+
Sbjct: 326 AYPQQNSTFNVSVSTRTIMRQEFKQGLAITDEIMLGRTEWIKLFEPPNFFGKYKHFIVLM 385
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
A++++ E LEW GL+ESK+R LI NLER+P+I +AHVNPE + P
Sbjct: 386 ATTMTKEHHLEWYGLVESKIRILISNLERHPYIEIAHVNPESF-------------PPCE 432
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAA-NVILNLTYDIQHFTNAVHWQATQSKMMK 506
+G + + SMWFIGL F +V ++LTYDI+ F + V QAT ++K
Sbjct: 433 PDGDK------------LQSMWFIGLQFSKTEHVNVDLTYDIRSFVDTVKRQATAINILK 480
Query: 507 DGMKIEVRHVKK 518
M++++++V++
Sbjct: 481 QDMEVDIKYVRR 492
>gi|21914853|ref|NP_035242.1| poly(A) polymerase alpha [Mus musculus]
gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase
gi|21623967|dbj|BAC00996.1| polyA polymerase [Mus musculus]
gi|162318632|gb|AAI56655.1| Poly (A) polymerase alpha [synthetic construct]
Length = 739
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/551 (59%), Positives = 408/551 (74%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
SP +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----------------APKESPDREEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK + G + T+ D
Sbjct: 466 TVYRQAINSKMFELDMKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLTALNDSSLDL 525
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 526 SMDSDNSMSVP 536
>gi|148686800|gb|EDL18747.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
gi|148686803|gb|EDL18750.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
Length = 736
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/551 (59%), Positives = 408/551 (74%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 6 GSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 65
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 66 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 125
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 126 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 185
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 186 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 245
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 246 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 305
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 306 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 365
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 366 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 419
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
SP +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 420 -----------------APKESPDREEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 462
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK + G + T+ D
Sbjct: 463 TVYRQAINSKMFELDMKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLTALNDSSLDL 522
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 523 SMDSDNSMSVP 533
>gi|432104377|gb|ELK31030.1| Poly(A) polymerase alpha [Myotis davidii]
Length = 844
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/551 (60%), Positives = 411/551 (74%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKPY V E +EEL R+ +L KL
Sbjct: 107 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPYGVFEEEEELQRRILILGKL 166
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 167 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 226
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 227 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 286
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 287 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 346
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 347 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 406
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 407 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFF 466
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 467 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 520
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 521 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 563
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL E LP H+L+K KK + G + T + D
Sbjct: 564 TVYRQAINSKMFEVDMKIAAMHVKRKQLHELLPNHVLQKKKKHSTEGVRLTPLNENSLDL 623
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 624 SMDSDNSMSVP 634
>gi|345325876|ref|XP_001511509.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Ornithorhynchus anatinus]
Length = 740
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/551 (60%), Positives = 411/551 (74%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q QAP YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 10 GSQQIQAPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKL 69
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 70 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 129
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 130 FFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 189
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 190 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 249
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 250 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 309
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 310 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 369
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 370 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 423
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 424 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 466
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+ D
Sbjct: 467 TVYRQAINSKMFEMDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSMEGVRLTALNDSSLDL 526
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 527 SMDSDNSMSVP 537
>gi|426248569|ref|XP_004018035.1| PREDICTED: poly(A) polymerase alpha [Ovis aries]
Length = 739
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/522 (61%), Positives = 401/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPSHVLQKKKK 507
>gi|148686802|gb|EDL18749.1| poly (A) polymerase alpha, isoform CRA_c [Mus musculus]
Length = 729
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/551 (59%), Positives = 408/551 (74%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 6 GSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 65
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 66 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 125
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 126 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 185
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 186 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 245
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 246 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 305
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 306 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 365
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 366 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 419
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
SP +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 420 -----------------APKESPDREEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 462
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK + G + T+ D
Sbjct: 463 TVYRQAINSKMFELDMKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLTALNDSSLDL 522
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 523 SMDSDNSMSVP 533
>gi|395504561|ref|XP_003756616.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 739
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/550 (59%), Positives = 409/550 (74%), Gaps = 28/550 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLVAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA 553
V+ QA SKM + MKI HVK++QL + LP H+L+K KK S + T+ D +
Sbjct: 466 TVYRQAINSKMFEMDMKIAAMHVKRRQLHQLLPNHVLQKKKKHSSEVRLTALNDSSLDLS 525
Query: 554 LDELGDKSRP 563
+D S P
Sbjct: 526 MDSDNSMSVP 535
>gi|119620434|gb|EAX00029.1| poly(A) polymerase gamma, isoform CRA_a [Homo sapiens]
Length = 508
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/505 (62%), Positives = 386/505 (76%), Gaps = 27/505 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHM 529
+K+GMKIE HVKKKQL YLPA +
Sbjct: 476 LKEGMKIEATHVKKKQLHHYLPAEI 500
>gi|417412482|gb|JAA52623.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 725
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/522 (62%), Positives = 395/522 (75%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T+ L E LKP+ V E +EEL R+ +L KL
Sbjct: 22 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKL 81
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 82 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 141
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 142 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 201
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 202 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 261
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 262 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 321
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 322 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFF 381
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 382 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 435
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
SP +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 436 -----------------APKESPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 478
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL E LP H+L+K KK
Sbjct: 479 TVYRQAINSKMFEVDMKIAAMHVKRKQLHELLPNHVLQKRKK 520
>gi|28603760|ref|NP_788820.1| poly(A) polymerase alpha [Bos taurus]
gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|605|emb|CAA43782.1| polynucleotide adenylyltransferase [Bos taurus]
gi|296475173|tpg|DAA17288.1| TPA: poly(A) polymerase alpha [Bos taurus]
Length = 739
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/522 (61%), Positives = 401/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPSHVLQKKKK 507
>gi|440899282|gb|ELR50609.1| Poly(A) polymerase alpha, partial [Bos grunniens mutus]
Length = 736
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/522 (61%), Positives = 401/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 6 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKL 65
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 66 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 125
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 126 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 185
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 186 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 245
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 246 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 305
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 306 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 365
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 366 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 419
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 420 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 462
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK
Sbjct: 463 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPSHVLQKKKK 504
>gi|354482269|ref|XP_003503321.1| PREDICTED: poly(A) polymerase alpha [Cricetulus griseus]
Length = 742
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/551 (59%), Positives = 412/551 (74%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 12 GSQQAQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 71
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 72 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 131
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 132 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 191
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 192 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 251
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 252 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 311
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 312 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 371
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 372 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 425
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 426 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 468
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK + G + T+ D
Sbjct: 469 TVYRQAINSKMFELDMKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLTALNDSSLDL 528
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 529 SMDSDNSMSVP 539
>gi|157820829|ref|NP_001101526.1| poly(A) polymerase alpha [Rattus norvegicus]
gi|149044213|gb|EDL97595.1| poly (A) polymerase alpha (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 739
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/522 (61%), Positives = 397/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
SP +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----------------APKESPDREEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK
Sbjct: 466 TVYRQAINSKMFELDMKIAAMHVKRKQLHQLLPSHVLQKRKK 507
>gi|417412515|gb|JAA52639.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 738
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/522 (62%), Positives = 395/522 (75%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T+ L E LKP+ V E +EEL R+ +L KL
Sbjct: 22 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKL 81
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 82 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 141
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 142 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 201
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 202 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 261
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 262 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 321
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 322 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFF 381
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 382 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 435
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
SP +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 436 -----------------APKESPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 478
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL E LP H+L+K KK
Sbjct: 479 TVYRQAINSKMFEVDMKIAAMHVKRKQLHELLPNHVLQKRKK 520
>gi|32490557|ref|NP_116021.2| poly(A) polymerase alpha isoform 1 [Homo sapiens]
gi|332843097|ref|XP_003314562.1| PREDICTED: poly(A) polymerase alpha [Pan troglodytes]
gi|426377955|ref|XP_004055715.1| PREDICTED: poly(A) polymerase alpha [Gorilla gorilla gorilla]
gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|23271194|gb|AAH36014.1| Poly(A) polymerase alpha [Homo sapiens]
gi|119602048|gb|EAW81642.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|119602050|gb|EAW81644.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|306921445|dbj|BAJ17802.1| poly(A) polymerase alpha [synthetic construct]
gi|410307962|gb|JAA32581.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351881|gb|JAA42544.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351883|gb|JAA42545.1| poly(A) polymerase alpha [Pan troglodytes]
Length = 745
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/594 (56%), Positives = 428/594 (72%), Gaps = 30/594 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+ D
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDL 525
Query: 553 ALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++D S P S + + S ++ S+ G S + S++ + SV
Sbjct: 526 SMDSDNSMSVPSPTSATKT-SPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSV 578
>gi|388454164|ref|NP_001252826.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809034|gb|AFE76392.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809036|gb|AFE76393.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411427|gb|AFH28927.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411429|gb|AFH28928.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944936|gb|AFI36073.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944940|gb|AFI36075.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 745
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/594 (56%), Positives = 428/594 (72%), Gaps = 30/594 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+ D
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDL 525
Query: 553 ALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++D S P S + + S ++ S+ G S + S++ + SV
Sbjct: 526 SMDSDNSMSVPSPTSATKT-SPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSV 578
>gi|380809032|gb|AFE76391.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383415357|gb|AFH30892.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944938|gb|AFI36074.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 724
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/594 (56%), Positives = 428/594 (72%), Gaps = 30/594 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+ D
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDL 525
Query: 553 ALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++D S P S + + S ++ S+ G S + S++ + SV
Sbjct: 526 SMDSDNSMSVPSPTSATKT-SPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSV 578
>gi|355693555|gb|EHH28158.1| hypothetical protein EGK_18525, partial [Macaca mulatta]
gi|355778841|gb|EHH63877.1| hypothetical protein EGM_16936, partial [Macaca fascicularis]
Length = 745
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/551 (59%), Positives = 411/551 (74%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+ D
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDL 525
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 526 SMDSDNSMSVP 536
>gi|126290553|ref|XP_001375249.1| PREDICTED: poly(A) polymerase alpha-like [Monodelphis domestica]
Length = 738
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/550 (59%), Positives = 409/550 (74%), Gaps = 28/550 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D ++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCILAQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF------- 421
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 422 ----PAPKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA 553
V+ QA SKM + MKI HVK++QL + LP H+L+K KK S + T+ D +
Sbjct: 466 TVYRQAINSKMFEMDMKIAAMHVKRRQLHQLLPNHVLQKKKKHSSEVRLTALNDSSLDLS 525
Query: 554 LDELGDKSRP 563
+D S P
Sbjct: 526 MDSDNSMSVP 535
>gi|194379500|dbj|BAG63716.1| unnamed protein product [Homo sapiens]
Length = 761
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/594 (56%), Positives = 428/594 (72%), Gaps = 30/594 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 25 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKL 84
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 85 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 144
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 145 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 204
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 205 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 264
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 265 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 324
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 325 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGPAITDEILLSKAEWSKLFEAPNFF 384
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 385 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 438
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 439 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 481
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+ D
Sbjct: 482 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDL 541
Query: 553 ALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++D S P S + + S ++ S+ G S + S++ + SV
Sbjct: 542 SMDSDNSMSVPSPTSATKT-SPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSV 594
>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, isoform CRA_f [Homo sapiens]
Length = 744
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/551 (59%), Positives = 411/551 (74%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF------- 421
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 422 ----PAPKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+ D
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDL 525
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 526 SMDSDNSMSVP 536
>gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos taurus]
Length = 693
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/522 (61%), Positives = 401/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPSHVLQKKKK 507
>gi|28207949|emb|CAD62628.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/551 (59%), Positives = 411/551 (74%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 36 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKL 95
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 96 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 155
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 156 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 215
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 216 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 275
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 276 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 335
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 336 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 395
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 396 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 449
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 450 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 492
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+ D
Sbjct: 493 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDL 552
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 553 SMDSDNSMSVP 563
>gi|431839265|gb|ELK01192.1| Poly(A) polymerase alpha, partial [Pteropus alecto]
Length = 746
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/522 (62%), Positives = 400/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 16 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 75
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 76 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 135
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 136 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 195
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 196 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 255
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 256 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 315
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 316 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFF 375
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 376 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 429
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 430 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 472
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL E LP H+L+K KK
Sbjct: 473 TVYRQAINSKMFEVDMKIAAMHVKRKQLHELLPNHVLQKKKK 514
>gi|281345200|gb|EFB20784.1| hypothetical protein PANDA_017098 [Ailuropoda melanoleuca]
Length = 736
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/522 (61%), Positives = 400/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 6 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 65
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 66 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 125
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 126 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 185
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 186 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 245
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 246 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 305
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 306 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 365
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 366 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 419
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 420 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 462
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK
Sbjct: 463 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKK 504
>gi|74210049|dbj|BAE21312.1| unnamed protein product [Mus musculus]
Length = 739
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/551 (59%), Positives = 407/551 (73%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
SP +MW IGL + N+ ++LTYDIQ FT+
Sbjct: 423 -----------------APKESPDREEFRTMWVIGLVLKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHML-KKDKKTKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP+H+L K++K + G + T+ D
Sbjct: 466 TVYRQAINSKMFELDMKIAAMHVKRKQLHQLLPSHVLQKRNKHSTEGVKLTALNDSSLDL 525
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 526 SMDSDNSMSVP 536
>gi|371470953|gb|AEX30810.1| poly(A) polymerase [Bubalus bubalis]
Length = 739
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/522 (62%), Positives = 398/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF------- 421
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+ EN P +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 422 --------------QAPKEN--PDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL LP+H+L+K KK
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHPLLPSHVLQKKKK 507
>gi|301783837|ref|XP_002927334.1| PREDICTED: poly(A) polymerase alpha-like [Ailuropoda melanoleuca]
Length = 739
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/522 (61%), Positives = 400/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKK 507
>gi|148233493|ref|NP_001083620.1| poly(A) polymerase alpha-B [Xenopus laevis]
gi|38303906|gb|AAH61931.1| Pap protein [Xenopus laevis]
Length = 731
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/521 (61%), Positives = 398/521 (76%), Gaps = 29/521 (5%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G QSQ TYG+T+ ++L+ P D T++L E LKPY V E ++EL R+ +L KLN
Sbjct: 9 GSQQSQK--TYGITSPISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILILGKLN 66
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADY 138
NLVKEWI+E+S KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+
Sbjct: 67 NLVKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDF 126
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
FSSF+EKLK +EV DLR+VEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD L
Sbjct: 127 FSSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSL 186
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
LKNLD +C+RSLNGCRVTDEIL LVPNI++FRL LR IKLWAK+H IYSN+LG+LGGVSW
Sbjct: 187 LKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSW 246
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DR
Sbjct: 247 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 306
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLF+ PNFF
Sbjct: 307 YHLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQ 366
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIA 438
KY+HY++L+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 367 KYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------- 419
Query: 439 NGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNA 494
+P +E +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 420 ----APSENSEKEE------------FRTMWVIGLVFKKMENSENLSVDLTYDIQSFTDT 463
Query: 495 VHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP+H+L K KK
Sbjct: 464 VYRQAINSKMFETEMKIAAMHVKRKQLHQLLPSHVLPKKKK 504
>gi|397526096|ref|XP_003832975.1| PREDICTED: poly(A) polymerase alpha, partial [Pan paniscus]
Length = 804
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/594 (56%), Positives = 428/594 (72%), Gaps = 30/594 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 68 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKL 127
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 128 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 187
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 188 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 247
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 248 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 307
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 308 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 367
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 368 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 427
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 428 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 481
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 482 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 524
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+ D
Sbjct: 525 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDL 584
Query: 553 ALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++D S P S + + S ++ S+ G S + S++ + SV
Sbjct: 585 SMDSDNSMSVPSPTSATKT-SPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSV 637
>gi|345804115|ref|XP_537551.3| PREDICTED: poly(A) polymerase alpha [Canis lupus familiaris]
Length = 832
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/522 (61%), Positives = 400/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 102 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 161
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 162 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 221
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 222 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 281
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 282 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 341
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 342 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 401
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 402 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 461
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 462 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 515
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 516 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 558
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK
Sbjct: 559 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKK 600
>gi|390469486|ref|XP_002754311.2| PREDICTED: poly(A) polymerase alpha isoform 1 [Callithrix jacchus]
Length = 745
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/551 (59%), Positives = 411/551 (74%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF------- 421
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 422 ----PAPKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+ D
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDL 525
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 526 SMDSDNSMSVP 536
>gi|395827780|ref|XP_003787073.1| PREDICTED: poly(A) polymerase alpha [Otolemur garnettii]
Length = 740
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/551 (59%), Positives = 411/551 (74%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+ D
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVRLTALNDSSLDL 525
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 526 SMDSDNSMSVP 536
>gi|410962897|ref|XP_003988005.1| PREDICTED: poly(A) polymerase alpha [Felis catus]
Length = 739
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/522 (61%), Positives = 400/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKK 507
>gi|194038370|ref|XP_001929110.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Sus scrofa]
Length = 739
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/522 (61%), Positives = 400/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKK 507
>gi|149737664|ref|XP_001489128.1| PREDICTED: poly(A) polymerase alpha-like [Equus caballus]
Length = 755
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/522 (61%), Positives = 400/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 25 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 84
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 85 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 144
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 145 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 204
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 205 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 264
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 265 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 324
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 325 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 384
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 385 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 438
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 439 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 481
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK
Sbjct: 482 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKK 523
>gi|417412403|gb|JAA52590.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 709
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/552 (59%), Positives = 406/552 (73%), Gaps = 29/552 (5%)
Query: 18 DGKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSK 76
G Q+Q P YG+T+ ++L+ P + D T+ L E LKP+ V E +EEL R+ +L K
Sbjct: 21 QGSQQTQPPQKHYGITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGK 80
Query: 77 LNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA 136
LNNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+
Sbjct: 81 LNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS 140
Query: 137 DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDD 196
D+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 141 DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDD 200
Query: 197 MLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGV
Sbjct: 201 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 260
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA 316
SWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +
Sbjct: 261 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 320
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNF
Sbjct: 321 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNF 380
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV 436
F KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 381 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----- 435
Query: 437 IANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFT 492
SP +MW IGL F + N+ ++LTYDIQ FT
Sbjct: 436 ------------------APKESPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFT 477
Query: 493 NAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSD 551
+ V+ QA SKM + MKI HVK+KQL E LP H+L+K KK + G + T + D
Sbjct: 478 DTVYRQAINSKMFEVDMKIAAMHVKRKQLHELLPNHVLQKRKKHSAEGVRLTPLNENSLD 537
Query: 552 QALDELGDKSRP 563
++D S P
Sbjct: 538 LSVDSDNSMSVP 549
>gi|194379056|dbj|BAG58079.1| unnamed protein product [Homo sapiens]
Length = 740
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/595 (56%), Positives = 429/595 (72%), Gaps = 32/595 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 25 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKL 84
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 85 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 144
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 145 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 204
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 205 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 264
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 265 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 324
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 325 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 384
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 385 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 438
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 439 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 481
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKS--GDQNTSAKKRKSD 551
V+ QA SKM + MKI HVK+KQL + LP H+L+K KKT S G + T+ D
Sbjct: 482 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQK-KKTHSTEGVKLTALNDSSLD 540
Query: 552 QALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++D S P S + + S ++ S+ G S + S++ + SV
Sbjct: 541 LSMDSDNSMSVPSPTSATKT-SPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSV 594
>gi|417412397|gb|JAA52587.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 707
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/522 (62%), Positives = 395/522 (75%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T+ L E LKP+ V E +EEL R+ +L KL
Sbjct: 22 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKL 81
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 82 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 141
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 142 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 201
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 202 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 261
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 262 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 321
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 322 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFF 381
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 382 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 435
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
SP +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 436 -----------------APKESPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 478
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL E LP H+L+K KK
Sbjct: 479 TVYRQAINSKMFEVDMKIAAMHVKRKQLHELLPNHVLQKRKK 520
>gi|228152|prf||1717389A poly(A) polymerase
Length = 689
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/522 (61%), Positives = 400/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+ +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREIRESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPSHVLQKKKK 507
>gi|643|emb|CAA45031.1| poly(A) polymerase [Bos taurus]
Length = 689
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/522 (61%), Positives = 400/522 (76%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+ +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREIRESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----APKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPSHVLQKKKK 507
>gi|327259110|ref|XP_003214381.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Anolis carolinensis]
Length = 771
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/540 (60%), Positives = 406/540 (75%), Gaps = 28/540 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KLNNLVKEWI+E+
Sbjct: 51 YGITSPISLAAPKENDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREI 110
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+F+SF+EKLK
Sbjct: 111 SEIKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYEKLKL 170
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 171 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 230
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 231 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 290
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 291 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 350
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF KY+HY+VL+A
Sbjct: 351 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLA 410
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ + +P+
Sbjct: 411 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP-----------APKENP 459
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
+ +E +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM
Sbjct: 460 DKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKM 507
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRP 563
+ MKI HVK++QL + LP+H+L+K KK + G + T+ D ++D S P
Sbjct: 508 FEMDMKIAAMHVKRRQLHQLLPSHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSTSVP 567
>gi|344274222|ref|XP_003408916.1| PREDICTED: poly(A) polymerase alpha-like [Loxodonta africana]
Length = 739
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/551 (59%), Positives = 410/551 (74%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q++ P YG+T+ ++L+ P + D T+ L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTRPPQKHYGITSPISLATPKETDCVLTQRLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF------- 421
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 422 ----PAPKDNPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK++QL + LP H+L+K KK + G + T+ D
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRRQLHQLLPNHVLQKKKKHSAEGVRLTALNDSSLDL 525
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 526 SMDSDNSMSVP 536
>gi|332226879|ref|XP_003262619.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma [Nomascus
leucogenys]
Length = 735
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/534 (59%), Positives = 392/534 (73%), Gaps = 33/534 (6%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++ +I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI---------AANVILNLTYDIQHFTNAVHWQA 499
KE +N SMWF +F + N+ +Y IQ FT+ V+ QA
Sbjct: 423 -NKEHHKDN------NYVSMWFPWDNFSESRKXENAESVNIXXXQSY-IQSFTDTVYRQA 474
Query: 500 TQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA 553
M+K+GMKIE HVKKKQL YLPA +L+K KK D N S+ +S ++
Sbjct: 475 NNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRS 528
>gi|213625101|gb|AAI69821.1| LOC733387 protein [Xenopus laevis]
Length = 750
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/532 (59%), Positives = 391/532 (73%), Gaps = 31/532 (5%)
Query: 18 DGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
DG+P P YG+T++++L+ P +D T++L E ++P+ V E D ELS RM VL KL
Sbjct: 10 DGQP----PKHYGITSSISLAGPKDIDHIYTQKLTEAMRPFGVFEDDAELSHRMVVLGKL 65
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI E+ K++PPT+ GGKI+TFGSYRLGVH KGADID+LCVAPRHV+R+D
Sbjct: 66 NNLVKEWIAELGEQKSLPPTIISAAGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERSD 125
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F +F EKLK D + +LRAVE+AFVPVIK F EID++FARL L+ IPD++DLRDD
Sbjct: 126 FFQTFSEKLKQQDGIKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDS 185
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
L+NLD +C+RSLNGCRVTDEIL LVPN ENFRL LR IKLWAK+ GIYSN+LG+LGGVS
Sbjct: 186 RLRNLDIRCIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVS 245
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRVN AD
Sbjct: 246 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPAD 305
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
R HLMPIITPAYPQQNST+NVSISTR++M EEFKQG ++++I G+ W KLFE PNFF
Sbjct: 306 RCHLMPIITPAYPQQNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNFF 365
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL AS+ + E LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 366 HKYKHYIVLTASASTEEHHLEWVGLVESKIRVLVGNLERNNFITLAHVNPQSFPGN---- 421
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
++ +N SMWF+G+ F A +V ++LT+DIQ FT+
Sbjct: 422 -------------RDHCKDNE------YVSMWFLGIIFKKVENAESVNIDLTHDIQSFTD 462
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
V+ QA M+K GMKIE HVK+KQL YLPA +++K KK D N SA
Sbjct: 463 TVYRQANNINMLKKGMKIEATHVKRKQLHHYLPAEVVQKRKKQSVPDINRSA 514
>gi|55669561|pdb|1Q79|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 514
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/522 (61%), Positives = 396/522 (75%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDXLLTQKLVETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLXFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD + +RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRXIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----------------APKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPSHVLQKKKK 507
>gi|67971414|dbj|BAE02049.1| unnamed protein product [Macaca fascicularis]
Length = 548
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/551 (59%), Positives = 406/551 (73%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ F GIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFGGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----------------APKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+ D
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDL 525
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 526 SMDSDNSMSVP 536
>gi|363731198|ref|XP_003640929.1| PREDICTED: poly(A) polymerase gamma-like [Gallus gallus]
Length = 716
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/566 (55%), Positives = 412/566 (72%), Gaps = 33/566 (5%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
Q+Q YG+T+ ++L+PP +D T++L E ++ + V E +EEL+ R+ VL KLNNLV
Sbjct: 11 QNQPQRHYGITSPISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNLV 70
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
KEWI E+ +KN+PP+V E VGG+I+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F S
Sbjct: 71 KEWIFELGESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 130
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
FFEKLK +E+ +LRAVE+A+VPV+K FDGIEID++FARL ++ + D++DLRDD L++
Sbjct: 131 FFEKLKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRS 190
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
LD +C+RSLNGCRVTDEIL LVPN ENF+L LR IKLWAK+ GIYSN+LG+LGGVSWAML
Sbjct: 191 LDIRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAML 250
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR CQL+PNA ASTLV KFFL+FS+W+WP PVLLK+P+ NL PVWDPRVN +DRYH+
Sbjct: 251 VARTCQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHV 310
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYPQQNST+NVS STR ++ EE K G ++ +I G++ W KLFE PNFF KY+
Sbjct: 311 MPIITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYK 370
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGS 441
HY+VL AS+ + E LEW GL+ESK+R L+GNLERN IN+AHVNP+ +
Sbjct: 371 HYIVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFP---------- 420
Query: 442 GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF----IAANVILNLTYDIQHFTNAVHW 497
G +E + S SMWF+G+ F A + ++LTYDIQ FT+AV+
Sbjct: 421 --------GNQEHCKQ-----SRYVSMWFLGIIFRKLESAESTKIDLTYDIQSFTDAVYR 467
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK--SGDQNTSA---KKRKSDQ 552
QA M+K+GMKIE +VK+K L +LPA L+K KK + QN S K+ S++
Sbjct: 468 QANNINMLKEGMKIETAYVKRKHLHYFLPAGTLQKRKKQSMLNISQNASGLRCKRASSNE 527
Query: 553 ALDELGDK-SRPRLDSDSNSLSDKVN 577
+L+ D SR +S S S+ K++
Sbjct: 528 SLNSSRDNHSRTPYNSSSLSMISKLD 553
>gi|55669560|pdb|1Q78|A Chain A, Crystal Structure Of Poly(A) Polymerase In Complex With
3'- Datp And Magnesium Chloride
Length = 514
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/522 (61%), Positives = 396/522 (75%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDXLLTQKLVETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD + +RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRXIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----------------APKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK
Sbjct: 466 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPSHVLQKKKK 507
>gi|147905450|ref|NP_001089116.1| poly(A) polymerase gamma [Xenopus laevis]
gi|73671771|gb|AAZ80291.1| SRP 3'-adenylating protein [Xenopus laevis]
Length = 751
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/532 (59%), Positives = 390/532 (73%), Gaps = 31/532 (5%)
Query: 18 DGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
DG+P P YG+T++++L+ P +D T++L E + P+ V E D ELS RM VL KL
Sbjct: 11 DGQP----PKHYGITSSISLAGPKDIDHIYTQKLTEAMGPFGVFEDDAELSHRMVVLGKL 66
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI E+ K++PPT+ GGKI+TFGSYRLGVH KGADID+LCVAPRHV+R+D
Sbjct: 67 NNLVKEWIAELGEQKSLPPTIISAAGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERSD 126
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F +F EKLK D + +LRAVE+AFVPVIK F EID++FARL L+ IPD++DLRDD
Sbjct: 127 FFQTFSEKLKQQDGIKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDS 186
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
L+NLD +C+RSLNGCRVTDEIL LVPN ENFRL LR IKLWAK+ GIYSN+LG+LGGVS
Sbjct: 187 RLRNLDIRCIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVS 246
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRVN AD
Sbjct: 247 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPAD 306
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
R HLMPIITPAYPQQNST+NVSISTR++M EEFKQG ++++I G+ W KLFE PNFF
Sbjct: 307 RCHLMPIITPAYPQQNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNFF 366
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL AS+ + E LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 367 HKYKHYIVLTASASTEEHHLEWVGLVESKIRVLVGNLERNNFITLAHVNPQSFPGN---- 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
++ +N SMWF+G+ F A +V ++LT+DIQ FT+
Sbjct: 423 -------------RDHCKDNE------YVSMWFLGIIFKKVENAESVNIDLTHDIQSFTD 463
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
V+ QA M+K GMKIE HVK+KQL YLPA +++K KK D N SA
Sbjct: 464 TVYRQANNINMLKKGMKIEATHVKRKQLHHYLPAEVVQKRKKQSVPDINRSA 515
>gi|351701193|gb|EHB04112.1| Poly(A) polymerase alpha, partial [Heterocephalus glaber]
Length = 736
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/551 (59%), Positives = 408/551 (74%), Gaps = 29/551 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 6 GSQQTQLPPKHYGITSPISLAAPKETDWVLTQKLIETLKPFGVFEEEEELQRRILILGKL 65
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 66 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 125
Query: 138 YFSSFFEKLKTVDEVTDLRAVE-EAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDD 196
+F+SF++KLK +EV DLR + EAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 126 FFTSFYDKLKLQEEVKDLRVCKWEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDD 185
Query: 197 MLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGV
Sbjct: 186 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 245
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA 316
SWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +
Sbjct: 246 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 305
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNF
Sbjct: 306 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNF 365
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV 436
F KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 366 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF------ 419
Query: 437 IANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAA---NVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F N+ ++LTYDIQ FT+
Sbjct: 420 -----PAPKENPDKEE------------FRTMWVIGLVFKKTENENLSVDLTYDIQSFTD 462
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQ 552
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+ D
Sbjct: 463 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDL 522
Query: 553 ALDELGDKSRP 563
++D S P
Sbjct: 523 SMDSDNSMSVP 533
>gi|54020874|ref|NP_001005684.1| poly(A) polymerase gamma [Xenopus (Silurana) tropicalis]
gi|49522894|gb|AAH75107.1| poly(A) polymerase beta (testis specific) [Xenopus (Silurana)
tropicalis]
Length = 752
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/526 (59%), Positives = 387/526 (73%), Gaps = 27/526 (5%)
Query: 24 QAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKE 83
Q P YG+T+ ++L+ P D T++L E ++P+ V E D ELS RM VL KLNNLVKE
Sbjct: 13 QPPKHYGITSPISLAGPKDTDHIYTQKLTEAMRPFGVFEDDAELSHRMVVLGKLNNLVKE 72
Query: 84 WIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFF 143
WI E+ K++PP++ VGGKI+TFGSYRLGVH KGADID+LCVAPRHV+R+D+F SF
Sbjct: 73 WIGELGEQKSLPPSIISAVGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERSDFFQSFS 132
Query: 144 EKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLD 203
EKLK D + +LRAVE+AFVPVIK F EID++FARL L+ IPD++DLRDD L+NLD
Sbjct: 133 EKLKQQDGIKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLD 192
Query: 204 QKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVA 263
+C+RSLNGCRVTDEIL LVPN ENFRL LR IKLWAK+ GIYSN+LG+LGGVSWAMLVA
Sbjct: 193 IRCIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVA 252
Query: 264 RICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMP 323
R CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRVN ADR HLMP
Sbjct: 253 RTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMP 312
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHY 383
IITPAYPQQNST+NVSISTR++M EEFKQG +++++I G+ W KLFE PNFF KY+HY
Sbjct: 313 IITPAYPQQNSTYNVSISTRSVMVEEFKQGLSVTDEILLGRCDWSKLFEPPNFFHKYKHY 372
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGS 443
+VL AS+ + E LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 373 IVLTASASTEEHHLEWVGLVESKIRVLVGNLERNSFITLAHVNPQSFPGN---------- 422
Query: 444 PEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQA 499
++ +N SMWF+G+ F A +V ++LT+DIQ FT+ V+ QA
Sbjct: 423 -------RDHCKDNE------YVSMWFLGIIFKKVENAESVNIDLTHDIQSFTDTVYRQA 469
Query: 500 TQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
M+K GM+IE HVK+KQL YL A +L+K KK D N SA
Sbjct: 470 NNINMLKKGMRIEATHVKRKQLHHYLHAEVLQKRKKQSVPDINRSA 515
>gi|326914719|ref|XP_003203670.1| PREDICTED: poly(A) polymerase gamma-like [Meleagris gallopavo]
Length = 860
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/593 (53%), Positives = 422/593 (71%), Gaps = 40/593 (6%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
Q+Q YG+T+ ++L+PP +D T++L E ++ + V E +EEL+ R+ VL KLNNLV
Sbjct: 149 QNQPHRHYGVTSPISLAPPKDIDYIHTQKLVEVMESFGVFEDEEELNHRLVVLCKLNNLV 208
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
KEWI E+ +KN+PP+V E VGG+I+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F S
Sbjct: 209 KEWIFELGESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 268
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
FFEKLK +E+ +LRAVE+A+VPV+K FDGIEID+LFARL ++ + D++DLRDD L++
Sbjct: 269 FFEKLKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLLFARLPVQTVSDNLDLRDDSRLRS 328
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
LD +C+RSLNGCRVTDEIL LVPN ENF+L LR IKLWAK+ GIYSN+LG+LGGVSWAML
Sbjct: 329 LDIRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAML 388
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR CQL+PNA ASTLV KFFL+FS+W+WP PVLLK+P+ NL PVWDPRVN +DRYH+
Sbjct: 389 VARTCQLHPNALASTLVNKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHV 448
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYPQQNST+NVS STR ++ EE K G ++ +I GK+ W KLFE PNFF KY+
Sbjct: 449 MPIITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGKSDWPKLFEQPNFFQKYK 508
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGS 441
HY+VL AS+ + E LEW GL+ESK+R L+GNLERN IN+AHVNP+ +
Sbjct: 509 HYIVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFP---------- 558
Query: 442 GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHW 497
G +E + S SMWF+G+ F + ++LTYDIQ FT+AV+
Sbjct: 559 --------GNQEHCKQ-----SRYVSMWFLGIIFRKLENTESTKIDLTYDIQSFTDAVYR 605
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK--SGDQNTSA---KKRKSDQ 552
QA M+K+GMKIE +VK+K L +LPA L+K KK + QN + K+ S++
Sbjct: 606 QANNINMLKEGMKIETAYVKRKHLHYFLPAGTLQKRKKQSILNISQNATGLRCKRASSNE 665
Query: 553 ALD-ELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLND 604
+L+ D SR +S S ++ K+ D S++E + ++ + G N+
Sbjct: 666 SLNSSRDDNSRTSYNSSSLNMLSKL-------DTSTAEMERNATIWRRNGTNN 711
>gi|395845544|ref|XP_003804110.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase beta [Otolemur
garnettii]
Length = 637
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 341/644 (52%), Positives = 433/644 (67%), Gaps = 52/644 (8%)
Query: 12 TSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRM 71
T Q PQ YG+++ ++L+ P D T++L E LKP+ V E +EEL R+
Sbjct: 8 TQGSQQTAPPQKH----YGISSPISLAAPKDTDCTLTQKLIETLKPFGVFEEEEELQRRI 63
Query: 72 EVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPR 131
+L KLNNLVKEWI+E+S +K++P V E VGGKI+TFGSYRLGVH KGADIDALCVAPR
Sbjct: 64 LILEKLNNLVKEWIREISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPR 123
Query: 132 HVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDM 191
HVDR+D+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+
Sbjct: 124 HVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDL 183
Query: 192 DLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLG 251
DLRDD LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG
Sbjct: 184 DLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILG 243
Query: 252 YLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDP 311
+LGGVSWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDP
Sbjct: 244 FLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDP 303
Query: 312 RVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLF 371
RVN +DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLF
Sbjct: 304 RVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLF 363
Query: 372 ETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYT 431
E P+FF KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 364 EAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP 423
Query: 432 DTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYD 487
+P+ E +E +MW IGL + ++LTYD
Sbjct: 424 -----------APKENPEKEE------------FRTMWVIGLVLKKPENSEILSIDLTYD 460
Query: 488 IQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKK 547
IQ FT+ V+ QA +KM + MKI H+K+K+L + LP H+L+K K G + T+
Sbjct: 461 IQSFTDTVYRQAINTKMFEMDMKIAAMHLKRKELHQLLPDHVLQKKKTQTEGVRLTALND 520
Query: 548 RKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSEC------------TEDNS 595
+ D ++D S R+ S++ + K+ ++ + SS + S
Sbjct: 521 NRLDLSVD-----SENRISVPSSTSTMKIGPLTGSSQGRSSPALTLMAGSVTNIQATEIS 575
Query: 596 LSQVYGLNDS---VADSIDNSLDDLS-STSPHPTPPVKVLSDCF 635
L QV S ++SI + S S SP P P V S C
Sbjct: 576 LQQVNPSESSGVASSESIPQTASQPSISPSPKPMVPRVVSSTCL 619
>gi|116283528|gb|AAH16738.1| PAPOLG protein [Homo sapiens]
Length = 496
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 305/492 (61%), Positives = 376/492 (76%), Gaps = 27/492 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILYLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 475
Query: 505 MKDGMKIEVRHV 516
+K+GMKIE HV
Sbjct: 476 LKEGMKIEATHV 487
>gi|405945155|gb|EKC17170.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 745
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 329/611 (53%), Positives = 416/611 (68%), Gaps = 46/611 (7%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T+ ++L P +DL+ + +L E ++P+ V E++EE+S RM+VL K+N LV+EWIK+VS
Sbjct: 18 GITSPISLEGPKPVDLKLSEKLEEAMRPHGVFESEEEMSHRMDVLHKINTLVREWIKDVS 77
Query: 90 IAKN-IPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
KN P + GGK+ TFGSYRLGVH KGADID LCVAPRHVDR+D+FSSFFE LK
Sbjct: 78 RQKNNYPEDKIDAFGGKVCTFGSYRLGVHTKGADIDTLCVAPRHVDRSDFFSSFFEILKN 137
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
EV DLRAVEEAFVPVIKM FDGIE+DMLFARLAL +IP+++DLRD+ LLKNL++KCVR
Sbjct: 138 TPEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALPQIPEEIDLRDESLLKNLNEKCVR 197
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN +FR+ LR IKLWAKK GIYSN LG+LGGVSWAMLVAR+CQL
Sbjct: 198 SLNGCRVTDEILHLVPNQHSFRMTLRAIKLWAKKKGIYSNALGFLGGVSWAMLVARVCQL 257
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLK---KPDNVNLGFPVWDPRVNVADRYHLMPII 325
YPNAA +TL+ KFF++ +W WPQPVLLK + NL FPVWDPRVN +DR+HLMPII
Sbjct: 258 YPNAAPATLLHKFFMIIHKWNWPQPVLLKALVHENKFNLSFPVWDPRVNTSDRFHLMPII 317
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYPQQNSTFNV++STR+IM EE K G I IY G+ W LFE NFF KY+HY+V
Sbjct: 318 TPAYPQQNSTFNVTLSTRSIMTEELKDGLEIVSKIYEGREEWGALFEPSNFFQKYKHYIV 377
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPE 445
L AS+V +D LEW G +ESK+R L+GNLERNP I LAHV+P SP
Sbjct: 378 LTASAVEEKDYLEWHGYVESKIRLLVGNLERNPCIKLAHVHP---------------SP- 421
Query: 446 ITAEGKEEGGENTSPPVSGVASMWFIGLDFIA---ANVILNLTYDIQHFTNAVHWQATQS 502
E GE WFIGL F+ N ++LT+DIQ FTN VH A
Sbjct: 422 -LGPLNESDGE--------YLCRWFIGLTFVKIENQNQNVDLTFDIQSFTNTVHKHAYHI 472
Query: 503 KMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNT----SAKKRKSDQALDE-L 557
+MKDGMK+E++HVK++QL Y+P +L + K+ ++ SA K +S+Q L
Sbjct: 473 NLMKDGMKVEIKHVKRRQLDLYVPPKILLQSKRAAVAQEHRSSIGSASKSESNQTLHHSR 532
Query: 558 GDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLNDSVADSIDNSLDDL 617
D R +S S LS++++ + + S +E +S S+ ++I+ + +
Sbjct: 533 SDTELVRSNSMSVDLSEEISQDAESSRDSVKSGSELSSTSK---------EAINGDVRKV 583
Query: 618 SSTSPHPTPPV 628
S SP PT V
Sbjct: 584 VSGSPVPTDSV 594
>gi|426355375|ref|XP_004045099.1| PREDICTED: poly(A) polymerase beta [Gorilla gorilla gorilla]
Length = 637
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 317/528 (60%), Positives = 391/528 (74%), Gaps = 29/528 (5%)
Query: 18 DGKPQ-SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSK 76
G PQ + P YG+++ ++L+ P + D TR L E L+P+ V E +EEL R+ VL K
Sbjct: 9 QGPPQPAPLPKRYGVSSPISLAVPKETDCLLTRRLIETLRPFGVFEEEEELQRRILVLEK 68
Query: 77 LNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA 136
LNNLVKEWI+E+S +K++P +V E VGGKI+TFGSYRLGVH KGADIDALCVAP HVDR+
Sbjct: 69 LNNLVKEWIREMSESKSLPQSVTENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS 128
Query: 137 DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDD 196
D+F+SF+ KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 DFFASFYAKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDD 188
Query: 197 MLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGGV
Sbjct: 189 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGV 248
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA 316
SWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +
Sbjct: 249 SWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPS 308
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DRYHLMPIITPAYPQQNST+NVSISTR +M EEFKQG I+ +I K W KLFE P+F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSF 368
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV 436
F KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 FQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----- 423
Query: 437 IANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFT 492
+P + +MW IGL + ++LTYDIQ FT
Sbjct: 424 ------------------APKENPDMEEFRTMWVIGLGLKKPENSEILSIDLTYDIQSFT 465
Query: 493 NAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
+ V+ QA SKM + GMKI H+++K+L + LP H+L +DKK S +
Sbjct: 466 DTVYRQAVNSKMFEMGMKITAMHLRRKELHQLLPHHVL-QDKKAHSPE 512
>gi|67972178|dbj|BAE02431.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 317/529 (59%), Positives = 395/529 (74%), Gaps = 31/529 (5%)
Query: 18 DGKPQSQAPV--TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLS 75
G PQ QAP+ YG+++ ++L+ P + D T+ L E L+P+ V E +EEL R+ VL
Sbjct: 9 QGPPQ-QAPLPKCYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLE 67
Query: 76 KLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR 135
KLNNLVKEWI+E+S +K++P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR
Sbjct: 68 KLNNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR 127
Query: 136 ADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRD 195
+D+F+SF+ KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRD
Sbjct: 128 SDFFTSFYVKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRD 187
Query: 196 DMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGG 255
D LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGG
Sbjct: 188 DSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGG 247
Query: 256 VSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
VSWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN
Sbjct: 248 VSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNP 307
Query: 316 ADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPN 375
+DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+
Sbjct: 308 SDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPS 367
Query: 376 FFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTG 435
FF KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 368 FFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP---- 423
Query: 436 VIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHF 491
+P + +MW IGL + ++LTYDIQ F
Sbjct: 424 -------------------APKENPDMEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSF 464
Query: 492 TNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
T+ V+ QA SKM + GMKI H+++K+L + LP H+L +DKK ++ +
Sbjct: 465 TDTVYRQAMNSKMFEMGMKITAMHLRRKELHQLLPHHVL-QDKKAQATE 512
>gi|72012045|ref|XP_780989.1| PREDICTED: poly(A) polymerase gamma [Strongylocentrotus purpuratus]
Length = 670
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 302/500 (60%), Positives = 383/500 (76%), Gaps = 21/500 (4%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
+S TYG+T+A++L P D ++T+EL E LKP+ V E +EEL+ R+ VL KL+ +V
Sbjct: 7 ESSTKKTYGITSAISLVGPRPEDNRQTKELVEALKPHGVFENEEELNHRLVVLGKLDQIV 66
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
K+WI+ V+ KNIPP +A+ VGGKIYTFGSYRLGVH KGADID LCVAP HV+R+D+F S
Sbjct: 67 KDWIRLVAEEKNIPPNIADTVGGKIYTFGSYRLGVHTKGADIDTLCVAPLHVERSDFFKS 126
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F++ +K + E D RAVEEAFVPVIK+ FDGIE+D+LFARLAL+ +P+++DL DD LLKN
Sbjct: 127 FYDIVKALPETKDCRAVEEAFVPVIKLVFDGIEMDILFARLALRVVPENLDLTDDSLLKN 186
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
LD KCVRSLNGCRVTDEIL +VP+ ENFRL LRTIKLWAKK G+YSN LG+LGGVSWAML
Sbjct: 187 LDPKCVRSLNGCRVTDEILNVVPSKENFRLTLRTIKLWAKKKGVYSNALGFLGGVSWAML 246
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPD-NVNLGFPVWDPRVNVADRYH 320
VAR CQLYPNAAASTLV KFFLVF++W WPQPVLLK P+ + LGF WDPRVNV+DR+H
Sbjct: 247 VARTCQLYPNAAASTLVNKFFLVFTKWAWPQPVLLKPPNTSTELGFAEWDPRVNVSDRFH 306
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKY 380
LMPIITPAYPQQNST+NVS ST+T++++E + G I+++I GK W+KLFE+ NFF KY
Sbjct: 307 LMPIITPAYPQQNSTYNVSQSTKTVIEQELQGGLAITQEIMQGKATWEKLFESSNFFGKY 366
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANG 440
+HY+VLIAS+ + +D L+W GL+ESK+R L+GNLERNPHI LAHV P+
Sbjct: 367 KHYIVLIASAGNEDDHLKWVGLVESKIRVLVGNLERNPHIKLAHVYPK------------ 414
Query: 441 SGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF--IAANVILNLTYDIQHFTNAVHWQ 498
S SP +G EE + +++WFIGL+F + +NLT DIQ F N VH
Sbjct: 415 SISPSTPLDGSEEEKTDEH------STLWFIGLEFQPLGPATNVNLTLDIQFFVNTVHRH 468
Query: 499 ATQSKMMKDGMKIEVRHVKK 518
+ K++++GMKIE +HVK+
Sbjct: 469 SVTIKLLQEGMKIEAKHVKR 488
>gi|426254899|ref|XP_004021112.1| PREDICTED: poly(A) polymerase beta [Ovis aries]
Length = 639
Score = 633 bits (1632), Expect = e-178, Method: Compositional matrix adjust.
Identities = 313/513 (61%), Positives = 385/513 (75%), Gaps = 27/513 (5%)
Query: 26 PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
P YG+++ ++L+PP + D T++L E LKP+ V E +EEL R+ +L KLNNLVKEWI
Sbjct: 18 PEHYGISSPISLAPPRETDCILTQKLIETLKPFGVFEEEEELQRRILILEKLNNLVKEWI 77
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
+E+S +K++P V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+F+SF++K
Sbjct: 78 REISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDK 137
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
LK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +
Sbjct: 138 LKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGGVSWAMLVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+FF KY+HY+V
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIV 377
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPE 445
L+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 378 LLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP-------------- 423
Query: 446 ITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQ 501
SP +MW IGL + ++LTYDIQ FT+ V+ QA
Sbjct: 424 ---------APKESPDKEEFRTMWVIGLVLKKPENSEVLSIDLTYDIQSFTDTVYRQAIN 474
Query: 502 SKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
SKM + MKI H+K+K+L + LP H+L+K K
Sbjct: 475 SKMFEVDMKIAAMHLKRKELHQLLPNHVLQKKK 507
>gi|403287191|ref|XP_003934837.1| PREDICTED: poly(A) polymerase beta [Saimiri boliviensis
boliviensis]
Length = 634
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 429/642 (66%), Gaps = 57/642 (8%)
Query: 18 DGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G PQ YG+++ ++L+ P + D T+ L E L+P+ V E +EEL R+ VL KL
Sbjct: 9 QGTPQPAK--RYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKL 66
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +K++P ++ E VGGKI+TFGSYRLGVH KGADIDALC+APRHVDR+D
Sbjct: 67 NNLVKEWIREISESKSLPQSILENVGGKIFTFGSYRLGVHTKGADIDALCIAPRHVDRSD 126
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF+ KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 127 FFTSFYAKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 186
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGGVS
Sbjct: 187 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVS 246
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 247 WAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSD 306
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+FF
Sbjct: 307 RYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFF 366
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 367 QKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 420
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTN 493
+P+ + +E +MW IGL + ++LTYDIQ FT+
Sbjct: 421 -----APKENPDKEE------------FRTMWVIGLVLKKPENSEILSIDLTYDIQSFTD 463
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK------------------ 535
V+ QA SKM + GMKI H+++K+L + LP H+L++ K
Sbjct: 464 TVYRQAMNSKMFETGMKIAAMHLRRKELHQLLPHHVLQEKKAHSTEGRRLTDLNDSSFDL 523
Query: 536 TKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNS 595
+ G+ + S S L S+ R +S SL+ +++N S + S
Sbjct: 524 SAGGENSISVPSSTSTMKTGPLTSSSQGR---NSPSLAVMTASVANIQATEISLQQVNTS 580
Query: 596 LSQVYGLNDSVADSIDNSLDDLSSTSPHPTPPVK--VLSDCF 635
S LN+S+ ++ + +P P P V V S C
Sbjct: 581 ESSGTALNESIPHAVSQ-----PAIAPSPKPMVTRVVSSTCL 617
>gi|77874206|ref|NP_064529.4| poly(A) polymerase beta [Homo sapiens]
gi|51094718|gb|EAL23967.1| poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 312/516 (60%), Positives = 387/516 (75%), Gaps = 28/516 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+++ ++L+ P + D T+ L E L+P+ V E +EEL R+ VL KLNNLVKEWI+E+
Sbjct: 21 YGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREI 80
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +K++P +V E VGGKI+TFGSYRLGVH KGADIDALCVAP HVDR+D+F+SF+ KLK
Sbjct: 81 SESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKL 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVSISTR +M EEFKQG I+ +I K W KLFE P+FF KY+HY+VL+A
Sbjct: 321 YPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLA 380
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 381 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----------------- 423
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKM 504
+P + +MW IGL + + ++LTYDIQ FT+ V+ QA SKM
Sbjct: 424 ------APKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKM 477
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
+ GMKI H+++K+L + LP H+L +DKK S +
Sbjct: 478 FEMGMKITAMHLRRKELHQLLPHHVL-QDKKAHSTE 512
>gi|330340378|ref|NP_001193351.1| poly(A) polymerase beta [Bos taurus]
Length = 642
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 312/513 (60%), Positives = 385/513 (75%), Gaps = 27/513 (5%)
Query: 26 PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
P YG+++ ++L+PP + D T++L E LKP+ V E +EEL R+ +L KLNNLVKEWI
Sbjct: 18 PKHYGISSPISLAPPRETDCILTQKLIETLKPFGVFEEEEELQRRILILEKLNNLVKEWI 77
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
+E+S +K++P V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+F+SF++K
Sbjct: 78 REISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDK 137
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
LK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +
Sbjct: 138 LKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGGVSWAMLVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRV+ +DRYHLMPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVSPSDRYHLMPII 317
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+FF KY+HY+V
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIV 377
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPE 445
L+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 378 LLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP-------------- 423
Query: 446 ITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQ 501
SP +MW IGL + ++LTYDIQ FT+ V+ QA
Sbjct: 424 ---------APKESPDKEEFRTMWVIGLVLKKPENSEVLSIDLTYDIQSFTDTVYRQAIN 474
Query: 502 SKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
SKM + MKI H+K+K+L + LP H+L+K K
Sbjct: 475 SKMFEMDMKIAAMHLKRKELHQLLPNHVLQKKK 507
>gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
gi|8895537|gb|AAF81013.1|AF218840_1 testis-specific poly(A) polymerase [Homo sapiens]
gi|41474575|gb|AAS07561.1| unknown [Homo sapiens]
Length = 636
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 312/516 (60%), Positives = 387/516 (75%), Gaps = 28/516 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+++ ++L+ P + D T+ L E L+P+ V E +EEL R+ VL KLNNLVKEWI+E+
Sbjct: 20 YGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREI 79
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +K++P +V E VGGKI+TFGSYRLGVH KGADIDALCVAP HVDR+D+F+SF+ KLK
Sbjct: 80 SESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKL 139
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 260 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVSISTR +M EEFKQG I+ +I K W KLFE P+FF KY+HY+VL+A
Sbjct: 320 YPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLA 379
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 380 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKM 504
+P + +MW IGL + + ++LTYDIQ FT+ V+ QA SKM
Sbjct: 423 ------APKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKM 476
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
+ GMKI H+++K+L + LP H+L +DKK S +
Sbjct: 477 FEMGMKITAMHLRRKELHQLLPHHVL-QDKKAHSTE 511
>gi|302564155|ref|NP_001181787.1| poly(A) polymerase beta [Macaca mulatta]
Length = 637
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 316/529 (59%), Positives = 393/529 (74%), Gaps = 31/529 (5%)
Query: 18 DGKPQSQAPV--TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLS 75
G PQ QAP+ YG+++ ++L+ P + D T+ L E L+P+ V E +EEL R+ VL
Sbjct: 9 QGPPQ-QAPLPKCYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLE 67
Query: 76 KLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR 135
KLNNLVKEWI+E+S +K++P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR
Sbjct: 68 KLNNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR 127
Query: 136 ADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRD 195
+D+F+SF+ KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRD
Sbjct: 128 SDFFTSFYVKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRD 187
Query: 196 DMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGG 255
D LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGG
Sbjct: 188 DSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGG 247
Query: 256 VSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
VSWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN
Sbjct: 248 VSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNP 307
Query: 316 ADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPN 375
+DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+
Sbjct: 308 SDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPS 367
Query: 376 FFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTG 435
FF KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 368 FFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP---- 423
Query: 436 VIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHF 491
+P + +MW IGL + ++LTYDIQ F
Sbjct: 424 -------------------APKENPDMEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSF 464
Query: 492 TNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
T+ V+ QA SKM + GMKI H+++K+L + LP H + +DKK + +
Sbjct: 465 TDTVYRQAMNSKMFEMGMKITAMHLRRKELHQLLP-HRVLQDKKAHATE 512
>gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=Poly(A) polymerase alpha-A; Short=PAP-alpha-A;
AltName: Full=Polynucleotide adenylyltransferase alpha-A
gi|643644|gb|AAC59745.1| poly(A) polymerase type 1, partial [Xenopus laevis]
Length = 715
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 313/514 (60%), Positives = 387/514 (75%), Gaps = 29/514 (5%)
Query: 26 PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
P T+G+T+ ++L+ D ++L E LKPY V E +E+L R +L KLNNLVKEWI
Sbjct: 1 PKTFGITSPISLAAAKDTDCTLMQKLIETLKPYGVFEEEEQLQHR--ILGKLNNLVKEWI 58
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
+E+S K++P +V E VGGKI+TFG YRLGVH KGADIDALCVAPRHVDR+D+FSSF++K
Sbjct: 59 REISELKHLPQSVIENVGGKIFTFGPYRLGVHTKGADIDALCVAPRHVDRSDFFSSFYDK 118
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
LK +EV DLR+VEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +
Sbjct: 119 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 178
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
C+RSLNGCRVTDEIL LVPNI++FRL LR IKLWAK+H IYSN+LG+LGGVSWAMLVAR
Sbjct: 179 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 238
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPII
Sbjct: 239 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 298
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYPQQNST+NVS+STR +M EEFKQG I+++I GK W KLF+ PNFF KY+HY++
Sbjct: 299 TPAYPQQNSTYNVSVSTRAVMIEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYIL 358
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPE 445
L+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP + +P
Sbjct: 359 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPRSFP-----------APS 407
Query: 446 ITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQ 501
E +E +MW IGL F + N+ ++LTYDIQ FT+ V QA
Sbjct: 408 ENMEKEE------------FRTMWVIGLVFKKMENSENLSVDLTYDIQSFTDTVDRQAIN 455
Query: 502 SKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
SKM + MKI HVK+KQL + P+H+ K KK
Sbjct: 456 SKMFETEMKIAAMHVKRKQLHQLQPSHVSPKKKK 489
>gi|402862797|ref|XP_003895729.1| PREDICTED: poly(A) polymerase beta [Papio anubis]
Length = 637
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 311/516 (60%), Positives = 387/516 (75%), Gaps = 28/516 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+++ ++L+ P + D T+ L E L+P+ V E +EEL R+ VL KLNNLVKEWI+E+
Sbjct: 21 YGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREI 80
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +K++P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+F+SF+ KLK
Sbjct: 81 SESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYVKLKL 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+FF KY+HY+VL+A
Sbjct: 321 YPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLA 380
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 381 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----------------- 423
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKM 504
+P + +MW IGL + ++LTYDIQ FT+ V+ QA SKM
Sbjct: 424 ------APKENPDMEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKM 477
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
+ GMKI H+++K+L + LP H+L +DKK + +
Sbjct: 478 FEMGMKITAMHLRRKELHQLLPHHVL-QDKKAHATE 512
>gi|9910588|ref|NP_064327.1| poly(A) polymerase beta [Mus musculus]
gi|5701744|dbj|BAA83086.1| testis-specific poly(A) polymerase [Mus musculus]
gi|120538333|gb|AAI29898.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|120538567|gb|AAI29897.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|148687152|gb|EDL19099.1| poly (A) polymerase beta (testis specific) [Mus musculus]
Length = 642
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 311/522 (59%), Positives = 393/522 (75%), Gaps = 27/522 (5%)
Query: 17 QDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSK 76
Q + + AP +G+++ ++L+ P D + T++L E L+P+ V E +EEL R+ +L K
Sbjct: 9 QGAQQPAPAPKQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQK 68
Query: 77 LNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA 136
LNNLVKEWI+E+S ++N+P V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR
Sbjct: 69 LNNLVKEWIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN 128
Query: 137 DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDD 196
D+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDD 188
Query: 197 MLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
LLKNLD +C+RSLNGCRVTDEIL LVPNI++FRL LR IKLWAK H IYSN+LG+LGGV
Sbjct: 189 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGV 248
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA 316
SWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +
Sbjct: 249 SWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPS 308
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSF 368
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV 436
F KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 FQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----- 423
Query: 437 IANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFT 492
+P+ TA+ +E +MW IGL + ++LTYDIQ FT
Sbjct: 424 ------APKETADKEE------------FRTMWVIGLVLKKPENSEILSIDLTYDIQSFT 465
Query: 493 NAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
+ V+ QA SKM + MKI H+++K+L + LP H+L+K +
Sbjct: 466 DTVYRQAINSKMFEMDMKIAAMHLRRKELHQLLPNHVLQKKE 507
>gi|354467761|ref|XP_003496337.1| PREDICTED: poly(A) polymerase beta-like [Cricetulus griseus]
Length = 642
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 311/522 (59%), Positives = 393/522 (75%), Gaps = 27/522 (5%)
Query: 17 QDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSK 76
Q + + AP YG+++ ++L+ P D + T++L E L+P+ V E +EEL R+ +L K
Sbjct: 9 QGAQQPAPAPKQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQK 68
Query: 77 LNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA 136
LNNLVKEWI+E+S ++N+P V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR
Sbjct: 69 LNNLVKEWIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN 128
Query: 137 DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDD 196
D+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDD 188
Query: 197 MLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
LLKNLD +C+RSLNGCRVTDEIL LVPNI++FRL LR IKLWAK H IYSN+LG+LGGV
Sbjct: 189 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGV 248
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA 316
SWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +
Sbjct: 249 SWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPS 308
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSF 368
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV 436
F KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 FQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----- 423
Query: 437 IANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFT 492
+P+ + +E +MW IGL + ++ ++LTYDIQ FT
Sbjct: 424 ------APKENVDKEE------------FRTMWVIGLVLKKPENSESLSIDLTYDIQSFT 465
Query: 493 NAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
+ V+ QA SKM + MKI H+K+K+L + LP H+L+K +
Sbjct: 466 DTVYRQAINSKMFEMDMKIAAMHLKRKELHQLLPNHVLQKKE 507
>gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
Length = 641
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 311/522 (59%), Positives = 393/522 (75%), Gaps = 27/522 (5%)
Query: 17 QDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSK 76
Q + + AP +G+++ ++L+ P D + T++L E L+P+ V E +EEL R+ +L K
Sbjct: 8 QGAQQPAPAPKQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQK 67
Query: 77 LNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA 136
LNNLVKEWI+E+S ++N+P V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR
Sbjct: 68 LNNLVKEWIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN 127
Query: 137 DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDD 196
D+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 128 DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDD 187
Query: 197 MLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
LLKNLD +C+RSLNGCRVTDEIL LVPNI++FRL LR IKLWAK H IYSN+LG+LGGV
Sbjct: 188 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGV 247
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA 316
SWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +
Sbjct: 248 SWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPS 307
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSF 367
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV 436
F KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 368 FQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----- 422
Query: 437 IANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFT 492
+P+ TA+ +E +MW IGL + ++LTYDIQ FT
Sbjct: 423 ------APKETADKEE------------FRTMWVIGLVLKKPENSEILSIDLTYDIQSFT 464
Query: 493 NAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
+ V+ QA SKM + MKI H+++K+L + LP H+L+K +
Sbjct: 465 DTVYRQAINSKMFEMDMKIAAMHLRRKELHQLLPNHVLQKKE 506
>gi|332864603|ref|XP_003318331.1| PREDICTED: poly(A) polymerase beta [Pan troglodytes]
gi|397498031|ref|XP_003819800.1| PREDICTED: poly(A) polymerase beta [Pan paniscus]
Length = 637
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 312/516 (60%), Positives = 385/516 (74%), Gaps = 28/516 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+ + ++L+ P + D T+ L E L+P+ V E +EEL R+ VL KLNNLVKEWI+E+
Sbjct: 21 YGVFSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREI 80
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +K++P +V E VGGKI+TFGSYRLGVH KGADIDALCVAP HVDR+D+F+SF+ KLK
Sbjct: 81 SESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKL 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVSISTR +M EEFKQG I+ +I K W KLFE P+FF KY+HY+VL+A
Sbjct: 321 YPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLA 380
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 381 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----------------- 423
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKM 504
+P + +MW IGL + ++LTYDIQ FT+ V+ QA SKM
Sbjct: 424 ------APKENPDMEEFCTMWVIGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKM 477
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
+ GMKI H+++K+L + LP H+L +DKK S +
Sbjct: 478 FEMGMKITAMHLRRKELHQLLPHHVL-QDKKAHSTE 512
>gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 311/516 (60%), Positives = 387/516 (75%), Gaps = 28/516 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+++ ++L+ P + D T+ L E L+P+ V E +EEL R+ VL KLNNLVKEWI+E+
Sbjct: 21 YGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIREI 80
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +K++P +V E VGGKI+TFGSYRLGVH KGADIDALCVAP HVDR+D+F+SF+ KLK
Sbjct: 81 SESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKL 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAV+EAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 141 QEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVSISTR +M EEFKQG I+ +I K W KLFE P+FF KY+HY+VL+A
Sbjct: 321 YPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLA 380
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 381 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----------------- 423
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKM 504
+P + +MW IGL + + ++LTYDIQ FT+ V+ QA SKM
Sbjct: 424 ------APKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKM 477
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
+ GMKI H+++K+L + LP H+L +DKK S +
Sbjct: 478 FEMGMKITAVHLRRKELHQLLPHHVL-QDKKAHSTE 512
>gi|123980646|gb|ABM82152.1| poly(A) polymerase beta (testis specific) [synthetic construct]
gi|123995471|gb|ABM85337.1| poly(A) polymerase beta (testis specific) [synthetic construct]
Length = 636
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 311/516 (60%), Positives = 387/516 (75%), Gaps = 28/516 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+++ ++L+ P + D T+ L E L+P+ V E +EEL R+ VL KLNNLVKEWI+E+
Sbjct: 20 YGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIREI 79
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +K++P +V E VGGKI+TFGSYRLGVH KGADIDALCVAP HVDR+D+F+SF+ KLK
Sbjct: 80 SESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKL 139
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAV+EAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 140 QEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 260 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVSISTR +M EEFKQG I+ +I K W KLFE P+FF KY+HY+VL+A
Sbjct: 320 YPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLA 379
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 380 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKM 504
+P + +MW IGL + + ++LTYDIQ FT+ V+ QA SKM
Sbjct: 423 ------APKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKM 476
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
+ GMKI H+++K+L + LP H+L +DKK S +
Sbjct: 477 FEMGMKITAVHLRRKELHQLLPHHVL-QDKKAHSTE 511
>gi|5456696|gb|AAD43624.1|AF039957_1 testis-specific poly(A) polymerase [Mus musculus]
Length = 641
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 310/522 (59%), Positives = 392/522 (75%), Gaps = 27/522 (5%)
Query: 17 QDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSK 76
Q + + AP +G+++ ++L+ P D + T++L E L+P+ V E +EEL R+ +L K
Sbjct: 8 QGAQQPAPAPKQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQK 67
Query: 77 LNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA 136
LNNLVKEWI+E+S ++N+P V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR
Sbjct: 68 LNNLVKEWIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN 127
Query: 137 DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDD 196
D+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 128 DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDD 187
Query: 197 MLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
LLKNLD +C+RS NGCRVTDEIL LVPNI++FRL LR IKLWAK H IYSN+LG+LGGV
Sbjct: 188 SLLKNLDIRCIRSFNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGV 247
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA 316
SWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +
Sbjct: 248 SWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPS 307
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSF 367
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV 436
F KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 368 FQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----- 422
Query: 437 IANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFT 492
+P+ TA+ +E +MW IGL + ++LTYDIQ FT
Sbjct: 423 ------APKETADKEE------------FRTMWVIGLVLKKPENSEILSIDLTYDIQSFT 464
Query: 493 NAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
+ V+ QA SKM + MKI H+++K+L + LP H+L+K +
Sbjct: 465 DTVYRQAINSKMFEMDMKIAAMHLRRKELHQLLPNHVLQKKE 506
>gi|58865618|ref|NP_001012020.1| poly(A) polymerase beta [Rattus norvegicus]
gi|50927350|gb|AAH79046.1| Poly (A) polymerase beta (testis specific) [Rattus norvegicus]
gi|149034991|gb|EDL89711.1| poly (A) polymerase beta (testis specific) [Rattus norvegicus]
Length = 642
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 310/522 (59%), Positives = 391/522 (74%), Gaps = 27/522 (5%)
Query: 17 QDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSK 76
Q + + AP YG+++ ++L+ P D + T++L E L+P+ V E +EEL R+ +L K
Sbjct: 9 QGAQQPAPAPKQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQK 68
Query: 77 LNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA 136
LNNLVKEWI+E+S ++N+P V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR
Sbjct: 69 LNNLVKEWIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN 128
Query: 137 DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDD 196
D+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDD 188
Query: 197 MLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
LLKNLD +C+RSLNGCRVTDEIL LVPNI++FRL LR IKLWAK H IYSN+LG+LGGV
Sbjct: 189 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGV 248
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA 316
SWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +
Sbjct: 249 SWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPS 308
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSF 368
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV 436
F KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 FQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----- 423
Query: 437 IANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFT 492
+P+ + +E +MW IGL + ++LTYDIQ FT
Sbjct: 424 ------APKENVDKEE------------FRTMWVIGLVLKKPENSEILSIDLTYDIQSFT 465
Query: 493 NAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
+ V+ QA SKM + MKI H+++K+L + LP H+L+K +
Sbjct: 466 DTVYRQAINSKMFEMDMKIAAMHLRRKELHQLLPNHVLQKKE 507
>gi|297679796|ref|XP_002817705.1| PREDICTED: poly(A) polymerase beta [Pongo abelii]
Length = 637
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 311/516 (60%), Positives = 388/516 (75%), Gaps = 28/516 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+++ ++L+ P + D T+ L E L+P+ V E + EL R+ VL KLNNLVKEWI+E+
Sbjct: 21 YGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEGELQRRILVLEKLNNLVKEWIREI 80
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +K++P +V E VGGKI+TFGSYRLGVH KGADIDALCVAP HVDR+D+F+SF+ KLK
Sbjct: 81 SESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKL 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVSISTR +M EEFKQG I+ +I K W KLFE P+FF KY+HY++L+A
Sbjct: 321 YPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIILLA 380
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ + +P+
Sbjct: 381 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP-----------APKENP 429
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKM 504
+ +E +MW IGL + ++LTYDIQ FT+ V+ QA SKM
Sbjct: 430 DKEE------------FRTMWVIGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKM 477
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
+ GMKI H+++K+L + LP H+L +DKK S +
Sbjct: 478 FEMGMKITAMHLRRKELHQLLPHHVL-QDKKAHSTE 512
>gi|291413714|ref|XP_002723110.1| PREDICTED: poly(A) polymerase beta (testis specific)-like
[Oryctolagus cuniculus]
Length = 629
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 311/539 (57%), Positives = 399/539 (74%), Gaps = 31/539 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+++ ++L+ P + D T++L E L+P+ V E +EEL SR+ +L KLNNLVKEWI+E+
Sbjct: 21 YGISSPISLAAPKETDCALTQKLIETLRPFGVFEEEEELQSRILILEKLNNLVKEWIREI 80
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S ++++P V E VGG+++TFGSYRLGVH KGADIDALCVAPRHVDR+D+F+SF++KLK
Sbjct: 81 SESRSLPEAVVESVGGRLFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKL 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAVEEAFVPVIK+ FDG+EID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 141 REEVRDLRAVEEAFVPVIKLCFDGVEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVP+I+NFRL LR IKLWAK H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPDIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+FF KY+HY+VL+A
Sbjct: 321 YPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLA 380
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ + +P+
Sbjct: 381 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP-----------APKENP 429
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKM 504
+ +E +MW IGL + ++LTYDIQ FT+ V+ QA SK
Sbjct: 430 DKEE------------FRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKT 477
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRP 563
+ MKI+ H+++K+L + LP H+L+K K G + T+ SD +L + S P
Sbjct: 478 FEMDMKIDAMHLRRKELHQLLPNHVLQKKKHPAEGVRLTAV----SDSSLGTDSENSMP 532
>gi|332257779|ref|XP_003277982.1| PREDICTED: poly(A) polymerase beta [Nomascus leucogenys]
Length = 637
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 313/515 (60%), Positives = 389/515 (75%), Gaps = 28/515 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+++ ++L+ P + D T+ L E L+P+ V E +EEL R+ VL KLNNLVKEWI+E+S
Sbjct: 22 GISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREIS 81
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+K++P +V + VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+F+SF+ KLK
Sbjct: 82 ESKSLPQSVIDNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYAKLKLQ 141
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+RS
Sbjct: 142 EEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRS 201
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+L +LGGVSWAMLVAR CQLY
Sbjct: 202 LNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILCFLGGVSWAMLVARTCQLY 261
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPAY
Sbjct: 262 PNAVASTLVRKFFLVFSEWEWPNPVLLKEPEQRNLNLPVWDPRVNPSDRYHLMPIITPAY 321
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
PQQNST+NVSISTR +M EEFKQG I+ +I K W KLFE P+FF KY+HY+VL+AS
Sbjct: 322 PQQNSTYNVSISTRMVMIEEFKQGLAITHEILLRKAEWSKLFEAPSFFQKYKHYIVLLAS 381
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAE 449
+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ + +P+
Sbjct: 382 ATTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP-----------APK---- 426
Query: 450 GKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKMM 505
ENT + +MW IGL + ++LTYDIQ FT+ V+ QA SKM
Sbjct: 427 ------ENTD--MEKFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMF 478
Query: 506 KDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
+ GMKI H+++K+L + LP H+L +DKK S +
Sbjct: 479 EVGMKITAMHLRRKELHQLLPHHVL-QDKKAHSTE 512
>gi|119359931|dbj|BAF41975.1| testis-specific poly(A) polymerase [Homo sapiens]
Length = 637
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 309/516 (59%), Positives = 386/516 (74%), Gaps = 28/516 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+++ ++L+ P + D T+ L E L+P+ V E +EEL R+ VL KLNNLVKEWI+E+
Sbjct: 21 YGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREI 80
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +K++P +V E VGGKI+TFGSYRLGVH KGADIDALCVAP HVDR+D+F+SF+ KLK
Sbjct: 81 SESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKL 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+ GGVSWAMLVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFHGGVSWAMLVARTCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV K+FLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 261 YPNAVASTLVRKYFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVSISTR +M E FKQG I+ +I K +W KLFE P+FF KY+HY+VL+A
Sbjct: 321 YPQQNSTYNVSISTRMVMIEVFKQGLAITHEILLTKAVWSKLFEAPSFFQKYKHYIVLLA 380
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 381 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----------------- 423
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKM 504
+P + +MW IGL + + ++LTYDIQ FT+ V+ QA SKM
Sbjct: 424 ------APKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKM 477
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
+ GMKI H+++K+L + LP H+L +DKK S +
Sbjct: 478 FEMGMKITAMHLRRKELHQLLPHHVL-QDKKAHSTE 512
>gi|311250845|ref|XP_003124320.1| PREDICTED: poly(A) polymerase beta-like [Sus scrofa]
Length = 640
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 310/516 (60%), Positives = 385/516 (74%), Gaps = 28/516 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+++ ++L+PP + D T++L E LKP+ V E +EEL R+ +L KLN LVKEWI+E+
Sbjct: 20 YGISSPISLAPPRETDCVLTQKLIETLKPFGVFEEEEELQRRILILEKLNYLVKEWIREL 79
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +K++P V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+F+SF++KLK
Sbjct: 80 SESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKL 139
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 140 HEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR +KLWAK H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 260 YPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+FF KY+HY+ L+A
Sbjct: 320 YPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIALLA 379
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 380 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKM 504
SP +MW IGL + ++LTYDIQ FT+ V+ QA SKM
Sbjct: 423 ------APRESPDKEEFRTMWVIGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNSKM 476
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
+ MKI H+++K+L + LP H+L + KKT S +
Sbjct: 477 FEMDMKIAAMHLRRKELHQLLPNHVLPQ-KKTPSPE 511
>gi|10835833|pdb|1F5A|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 513
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 316/522 (60%), Positives = 391/522 (74%), Gaps = 28/522 (5%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WA LVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAXLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHL PIITPAYPQQNST+NVS+STR + EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLXPIITPAYPQQNSTYNVSVSTRXVXVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------ 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P + W IGL F + N+ ++LTYDIQ FT+
Sbjct: 423 -----------------APKENPDKEEFRTXWVIGLVFKKTENSENLSVDLTYDIQSFTD 465
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SK + KI HVK+KQL + LP+H+L+K KK
Sbjct: 466 TVYRQAINSKXFEVDXKIAAXHVKRKQLHQLLPSHVLQKKKK 507
>gi|449496519|ref|XP_002196793.2| PREDICTED: poly(A) polymerase gamma [Taeniopygia guttata]
Length = 746
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 317/599 (52%), Positives = 418/599 (69%), Gaps = 32/599 (5%)
Query: 16 HQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLS 75
+ + Q+Q YG+T+ ++L+PP+ D T++L E +KP+ V E EEL R VL
Sbjct: 6 RRTSRQQNQPQGHYGLTSPISLAPPSDKDHIHTQKLIEAMKPFGVFEDQEELYHRTTVLG 65
Query: 76 KLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR 135
KLNN V+EWI E++ +KN+PP++ E+VGGKI+TFGSYRLGVH KG+DIDALCVAP HV+R
Sbjct: 66 KLNNFVREWILELAESKNLPPSITEQVGGKIFTFGSYRLGVHTKGSDIDALCVAPSHVER 125
Query: 136 ADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRD 195
+D+F SFFEKLK +EV +LRA+E+A+VPVIK FDGIEID++FA+L+L + DD+DLRD
Sbjct: 126 SDFFQSFFEKLKNQEEVKNLRAIEDAYVPVIKFEFDGIEIDLVFAKLSLPTVSDDLDLRD 185
Query: 196 DMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGG 255
D LK+LD +C+RSLNG RVTDEILRLVPN+ENFRL LR +KLWAK+ G+YSN++G+LGG
Sbjct: 186 DSCLKSLDIRCIRSLNGSRVTDEILRLVPNLENFRLTLRAVKLWAKRRGVYSNIMGFLGG 245
Query: 256 VSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
VSWAMLVARICQLYPNA ASTL+ KFFL+FS+W WP+PVLLK+ + L PVWDPRVN
Sbjct: 246 VSWAMLVARICQLYPNALASTLINKFFLIFSKWDWPKPVLLKRLEESFLNLPVWDPRVNP 305
Query: 316 ADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPN 375
+DRYH+MPIITPAYPQQNST+NVS+STR +M EEF++G ++++I GK+ W KLFE N
Sbjct: 306 SDRYHVMPIITPAYPQQNSTYNVSVSTRAVMVEEFQRGLEVTDEILKGKSDWSKLFEPLN 365
Query: 376 FFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTG 435
FF KY+HY+VL AS+ + E L W GL++SK+R L+GNLERN I +AHV P+ +
Sbjct: 366 FFQKYKHYIVLTASAFTEEHHLNWIGLVKSKIRVLVGNLERNEFITIAHVQPQSFP---- 421
Query: 436 VIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF----IAANVILNLTYDIQHF 491
G + SMWF+GL F A ++LT+ IQ F
Sbjct: 422 -------------------GNEVLYKQNAYVSMWFLGLVFKKAESAVKTNVDLTHGIQSF 462
Query: 492 TNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD--QNTSAKKRK 549
T+ V+ QA+ ++K+GMKIE +VK+KQL +LPA L+K KK + D QN S + K
Sbjct: 463 TDTVYRQASALNILKEGMKIEATYVKRKQLHYFLPAGTLQKRKKQRVSDISQNNSGLQCK 522
Query: 550 SDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLNDSVAD 608
+ D S+ R DS + S S +N IS D S++E + G N SVA+
Sbjct: 523 RSSLGESCSDGSKDR-DSRTPSNSSSLNKISKL-DISTAEAERNVECQSCSGAN-SVAE 578
>gi|115530785|emb|CAL49411.1| poly(A) polymerase alpha (pap) [Xenopus (Silurana) tropicalis]
Length = 474
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 309/491 (62%), Positives = 377/491 (76%), Gaps = 29/491 (5%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G QSQ TYG+T+ ++L+ P D T++L E LKP+ V E +EEL R+ +L KLN
Sbjct: 9 GSQQSQK--TYGITSPISLATPKDTDCTLTQKLIETLKPFGVFEEEEELQHRILILGKLN 66
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADY 138
NLVKEWI+E+S KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+
Sbjct: 67 NLVKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDF 126
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
FSSF+EKLK +EV DLR+VEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD L
Sbjct: 127 FSSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSL 186
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
LKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVSW
Sbjct: 187 LKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSW 246
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DR
Sbjct: 247 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 306
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I GK W KLF+ PNFF
Sbjct: 307 YHLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQ 366
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIA 438
KY+HY++L+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 367 KYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP------- 419
Query: 439 NGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNA 494
+P E +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 420 ----APSENTEKEE------------FRTMWVIGLVFKKMENSENLSVDLTYDIQSFTDT 463
Query: 495 VHWQATQSKMM 505
V+ QA SKM
Sbjct: 464 VYRQAINSKMF 474
>gi|296192583|ref|XP_002744135.1| PREDICTED: poly(A) polymerase beta [Callithrix jacchus]
Length = 634
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 332/642 (51%), Positives = 425/642 (66%), Gaps = 57/642 (8%)
Query: 18 DGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G PQ YG++ ++L+ P + D T+ L E L+P+ V E +EEL R+ VL KL
Sbjct: 9 QGTPQPAK--RYGISAPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKL 66
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +K++P ++ E VGGKI+TFGSYRLGVH KGADIDALC+APRHVDR+D
Sbjct: 67 NNLVKEWIREISESKSLPQSILENVGGKIFTFGSYRLGVHTKGADIDALCIAPRHVDRSD 126
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF+ KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 127 FFTSFYAKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 186
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLK+LD + +RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGGVS
Sbjct: 187 LLKDLDIRSIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHSIYSNILGFLGGVS 246
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 247 WAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEEQNLNLPVWDPRVNPSD 306
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+FF
Sbjct: 307 RYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFF 366
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 367 QKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFLAP---- 422
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTN 493
KE G+ +MW IGL + ++LTYDIQ FT+
Sbjct: 423 -------------KENPGKKE------FRTMWVIGLVLKKPENSEILSIDLTYDIQSFTD 463
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK------------------ 535
V+ QA SKM + GMKI H+++K+L + LP H+L++ K
Sbjct: 464 TVYRQAVNSKMFETGMKIAAMHLRRKELHQLLPHHVLQEKKAHSPEGRRLTDLNDRSFDL 523
Query: 536 TKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNS 595
+ G+ + S S L S+ R +S +L+ +++N S + S
Sbjct: 524 SAGGENSISVPSSTSTMKTGPLISSSQGR---NSPALAVMTASVTNIRATEISLQQVNTS 580
Query: 596 LSQVYGLNDSVADSIDNSLDDLSSTSPHPTPPVK--VLSDCF 635
S LN+S+ ++ + +P P P V V S C
Sbjct: 581 ESSGAALNESIPHAVSQ-----PAIAPSPKPMVTRVVSSTCL 617
>gi|62822283|gb|AAY14832.1| unknown [Homo sapiens]
Length = 465
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 293/470 (62%), Positives = 361/470 (76%), Gaps = 27/470 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 422
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNA 494
KE +N SMWF+G+ F A +V ++LTYDIQ FT+
Sbjct: 423 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDT 465
>gi|348554483|ref|XP_003463055.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Cavia porcellus]
Length = 741
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 316/556 (56%), Positives = 400/556 (71%), Gaps = 37/556 (6%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EE R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDWVLTQKLIETLKPFGVFEEEEEPQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFG--SYRLGV---HHKGADIDALCVAPRH 132
NNLVKEWI+E+S +K P +V G +T+G YR+G + GADIDALCVAPRH
Sbjct: 69 NNLVKEWIREISESKVSPESVFLDSG---FTWGPCKYRIGXWDYYFLGADIDALCVAPRH 125
Query: 133 VDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMD 192
VDR+D+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+D
Sbjct: 126 VDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLD 185
Query: 193 LRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGY 252
LRDD LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+
Sbjct: 186 LRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGF 245
Query: 253 LGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPR 312
LGGVSWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPR
Sbjct: 246 LGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 305
Query: 313 VNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFE 372
VN +DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE
Sbjct: 306 VNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFE 365
Query: 373 TPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTD 432
PNFF KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 366 APNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF-- 423
Query: 433 TTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDI 488
+P+ + +E +MW IGL F + N+ ++LTYDI
Sbjct: 424 ---------PAPKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDI 462
Query: 489 QHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKK 547
Q FT+ V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T+
Sbjct: 463 QSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALND 522
Query: 548 RKSDQALDELGDKSRP 563
D ++D S P
Sbjct: 523 SSLDLSMDSDNSMSVP 538
>gi|26335223|dbj|BAC31312.1| unnamed protein product [Mus musculus]
gi|74224037|dbj|BAE23879.1| unnamed protein product [Mus musculus]
Length = 429
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 273/402 (67%), Positives = 335/402 (83%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI ++
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDI 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|402890991|ref|XP_003908748.1| PREDICTED: poly(A) polymerase gamma [Papio anubis]
Length = 700
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 295/511 (57%), Positives = 359/511 (70%), Gaps = 63/511 (12%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D + +LRAVE+AFVPVIK FDGIE+
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEVR-------------------------------- 166
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
CRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 167 ----CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 222
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 223 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 282
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 283 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 342
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 343 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---------------- 386
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKM 504
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M
Sbjct: 387 -NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINM 439
Query: 505 MKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+K+GMKIE HVKKKQL YLPA +L+K KK
Sbjct: 440 LKEGMKIEATHVKKKQLHHYLPAEILQKKKK 470
>gi|443716054|gb|ELU07731.1| hypothetical protein CAPTEDRAFT_223399 [Capitella teleta]
Length = 657
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 310/618 (50%), Positives = 408/618 (66%), Gaps = 64/618 (10%)
Query: 15 PHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVL 74
P DG Q + P G+T+ L+L+PP + DL+ +++L + + PY V ET+EE + RMEVL
Sbjct: 10 PAGDG--QKKYP---GVTSPLSLAPPKEHDLELSKKLEKEMAPYGVFETEEEQAHRMEVL 64
Query: 75 SKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD 134
+K+N LVK WI++VS++K++P ++ E VGG +YTFGSYRLGV+ KGADID LCVAPRHV
Sbjct: 65 NKVNILVKAWIRDVSLSKSMPESLIEVVGGGVYTFGSYRLGVNTKGADIDTLCVAPRHVL 124
Query: 135 RADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLR 194
R+D+F SFFE LK EV D RAVEEAFVPVIKM FDGIE+DMLFARLAL+ + ++ +LR
Sbjct: 125 RSDFFGSFFESLKQHPEVKDCRAVEEAFVPVIKMEFDGIELDMLFARLALQVVEENQNLR 184
Query: 195 DDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLG 254
D+ LLKNLD +C+RSLNGCRVTDEIL LVPNIE+FR+ LR +KLWAKK GIYSN LG+LG
Sbjct: 185 DESLLKNLDIRCIRSLNGCRVTDEILHLVPNIESFRMTLRAVKLWAKKKGIYSNALGFLG 244
Query: 255 GVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN-LGFPVWDPRV 313
GVSWAMLVAR CQLYP+A +TL+ KFF++FS+W WP PVLLK+ + N L VWDPRV
Sbjct: 245 GVSWAMLVARTCQLYPHACPATLLQKFFMLFSKWDWPAPVLLKQMSDENKLSHTVWDPRV 304
Query: 314 NVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFET 373
NV+DR+HLMPIITPAYPQQNST+NVS STR IM +EFK+ ++ ++Y K W LF+
Sbjct: 305 NVSDRFHLMPIITPAYPQQNSTYNVSNSTRQIMMDEFKEALVVANNVYANKDEWGSLFQP 364
Query: 374 PNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDT 433
+FF KY+HY+VL+A S + + QLEW GL+ESK+R L+GNLE+NP I +AHVNP+ +
Sbjct: 365 SDFFQKYKHYIVLVARSDTEDHQLEWVGLVESKIRILVGNLEKNPFICIAHVNPKSF--- 421
Query: 434 TGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFT 492
G E E S + WF+GL F ++LTYDIQ+F
Sbjct: 422 ----------------GPNEDDE------SPYIAKWFVGLIFKTGTQTNIDLTYDIQNFM 459
Query: 493 NAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKR---K 549
+ V+ QA ++K GM++EV+H +KS ++++ K+ K
Sbjct: 460 DIVYRQALTINLLKKGMEVEVKH--------------------SKSESEDSTTKRLVPCK 499
Query: 550 SDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLNDSVADS 609
SD L R DS+++S ++++ GD S L+ N SV DS
Sbjct: 500 SDSFL--------LRQDSEADSTVLPDSSLAKEGDSQDS-LARTTELNLQVTDNSSVVDS 550
Query: 610 IDNSLDDLSSTSPHPTPP 627
STS P P
Sbjct: 551 TAQGDSSCDSTSKRPHSP 568
>gi|47221727|emb|CAG10199.1| unnamed protein product [Tetraodon nigroviridis]
Length = 685
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 290/524 (55%), Positives = 358/524 (68%), Gaps = 30/524 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+A++L+PP ++D T++L + +KP+ V E +EEL+
Sbjct: 18 YGITSAISLAPPREIDHHYTKKLCDAMKPFGVFEDEEELNHXXXXXXXXXXXXXXXXXXX 77
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
KGADIDALCVAPRHV+R D+F SFFEKLK
Sbjct: 78 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGADIDALCVAPRHVERTDFFQSFFEKLKQ 137
Query: 149 VDEVTDLR---AVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+E+ DLR VE+AFVPVIK FDGIEID+LFARLAL IPD++DLR D +LKNLD +
Sbjct: 138 HEEIKDLRVCLCVEDAFVPVIKFKFDGIEIDLLFARLALPSIPDNLDLRGDSILKNLDIR 197
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
C+RSLNGCRVTDEIL LVPN ENFRL LR IKLWAK+ GIYSN+LG+LGGVSWAMLVAR
Sbjct: 198 CIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 257
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRVN +DRYHLMPII
Sbjct: 258 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 317
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYPQQNST+NVS STRTIM EEFK G +++++I GK W KLFE P+FF KY+HY+V
Sbjct: 318 TPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHFFQKYKHYIV 377
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPE 445
L AS+ + E+ LEW GL+ESK+R L+GNLERN +I LAHVNP+ + +
Sbjct: 378 LTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS------------ 425
Query: 446 ITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQ 501
KE EN SMWFIG+ F A +V ++LTYDIQ FT+ V+ QA
Sbjct: 426 -----KENRNENE------FVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANN 474
Query: 502 SKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
M+K+GMKIE HVKKKQL+ YLP +++K K+ D N S+
Sbjct: 475 INMLKNGMKIEATHVKKKQLNLYLPPELVQKKKRQSIADLNRSS 518
>gi|198433414|ref|XP_002124981.1| PREDICTED: similar to Poly(A) polymerase gamma (PAP-gamma)
(Polynucleotide adenylyltransferase gamma) (SRP RNA
3-adenylating enzyme) (Neo-poly(A) polymerase) (Neo-PAP)
[Ciona intestinalis]
Length = 833
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 297/562 (52%), Positives = 396/562 (70%), Gaps = 34/562 (6%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T+ ++L+ P + D T +L E ++PY V E++ E S+R VL KLN +VKE++
Sbjct: 7 TYGITSPISLAEPTEKDRVLTEKLIEHIEPYGVFESESEHSARRIVLGKLNEIVKEFVMN 66
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS + +P ++ + GGK+YTFGSYRLGV KGADID LCV PRHV+R+D+FS F LK
Sbjct: 67 VSEERKLPQSLIDTAGGKLYTFGSYRLGVCAKGADIDTLCVVPRHVNRSDFFSVFCTLLK 126
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
EV++LRA+E+AFVPVIK+ F+G+EID+LF+RLAL+ +P D DLRDD LLKNLD +C+
Sbjct: 127 ERSEVSELRAIEDAFVPVIKLKFEGVEIDILFSRLALQVVPPDQDLRDDSLLKNLDIRCI 186
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEIL LVPNIENFRL LR IKLWAK+ GIYSN+LGYLGGVSWAMLVAR CQ
Sbjct: 187 RSLNGCRVTDEILHLVPNIENFRLTLRVIKLWAKRKGIYSNMLGYLGGVSWAMLVARTCQ 246
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN-LGFPVWDPRVNVADRYHLMPIIT 326
LYPNA ASTLV +FF VFSQW+WP+PVLLK+P+ N L PVWDPR N +DR HLMPIIT
Sbjct: 247 LYPNAIASTLVQRFFWVFSQWEWPRPVLLKQPEESNTLNLPVWDPRYNPSDRLHLMPIIT 306
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVL 386
PAYPQQNST+NV+ S+ T+M+ EF G ++ +I+ K+ W KL ETPNFF +Y+H++VL
Sbjct: 307 PAYPQQNSTYNVTRSSLTVMKGEFIDGYRVTAEIHENKSSWLKLLETPNFFNEYKHFIVL 366
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEI 446
+AS+ S E+ W GL+ESK+R L+G LERN +I +AH+ N +G P+
Sbjct: 367 MASAESQENFNLWTGLVESKIRILVGYLERNDYILIAHI-------------NQTGYPQ- 412
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGL----DFIAANVILNLTYDIQHFTNAVHWQATQS 502
E KE+ + + WF+GL D I+ N+ NLT+DIQ FT+ +H QA S
Sbjct: 413 --EVKEKDV------TTAYVNRWFLGLRFVKDLISTNI--NLTHDIQAFTDTLHRQAHNS 462
Query: 503 KMMKDGMKIEVRHVKKKQLSEYLP----AHMLKKDKKTKSGDQNTSAKKRKSDQALDELG 558
K+ K+GMK+E + ++ QL +YLP A + + K + S + +A S + ++L
Sbjct: 463 KVFKEGMKVEATYSRRSQLPKYLPESIAATIRRSSKSSLSRKKAHAAVVMASSPSSNDLT 522
Query: 559 DKSRPRLDSDSNSLSDKVNNIS 580
+ S R +S NS + +NN+S
Sbjct: 523 N-SNIRTESPVNSTNTSLNNVS 543
>gi|391336102|ref|XP_003742422.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 576
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 293/551 (53%), Positives = 375/551 (68%), Gaps = 29/551 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++++ P +DL +++EL L + + E+ EL R++VL ++N LV++WI+EVS
Sbjct: 18 GVTAPISVALPRPVDLDKSKELEAVLHEFGLFESASELDHRLQVLGRINELVQQWIQEVS 77
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
IAK +P +A GKI+TFGSYRLGVH KGADID LCVAPRHV+R D+F+SF E LK
Sbjct: 78 IAKGVPENIASSTRGKIFTFGSYRLGVHTKGADIDTLCVAPRHVERTDFFTSFVELLKQQ 137
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+V DLRAVEEA+VPVIKM FDGIE DMLFARLALK+IP D +LRD LLKNLD KCVRS
Sbjct: 138 PQVRDLRAVEEAYVPVIKMEFDGIEFDMLFARLALKDIPPDQELRDMTLLKNLDAKCVRS 197
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNGCRVTDEIL LVP+I FR ALRTIKLWAKK G+YSNVLGYLGGVSWAMLVAR CQLY
Sbjct: 198 LNGCRVTDEILHLVPDIPVFRTALRTIKLWAKKKGVYSNVLGYLGGVSWAMLVARTCQLY 257
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNL---GFPVWDPRVNVADRYHLMPIIT 326
P+AAA+ +V KFFLVFSQW WP+PV L+ + GF VWD R NVADRYHLMPIIT
Sbjct: 258 PHAAAAVVVQKFFLVFSQWPWPKPVHLRTQTAAHQHLGGFSVWDSRTNVADRYHLMPIIT 317
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVL 386
P YP+QNSTFN S+STRTIM + FK+G ++E+I GK W LF P FF +Y+ +++L
Sbjct: 318 PVYPEQNSTFNTSLSTRTIMTKAFKEGLAVTENILKGKGTWHDLFSPPEFFGQYKTFIML 377
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTG-------VIAN 439
A + + ED L W GL+ESK+R LI +LER P I +AHVNP+ Y V
Sbjct: 378 TAVANTKEDLLTWYGLVESKIRTLIISLERVPCIEIAHVNPKSYNKVKEDKPPAEPVKEQ 437
Query: 440 GSGSPEITAEGKEEGGENTSPP-----VSGVASMWFIGLDF--IAANVILNLTYDIQHFT 492
SP+ +AE + E + P GV WFIGL F + L+LT ++++
Sbjct: 438 QEESPKASAETEPNETEEKAEPKPQEETEGVN--WFIGLHFGQTKEKLNLDLTENVRNLR 495
Query: 493 NAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHML-------KKDKKTKSGDQNTS- 544
+ + QA K++KDGM +EVR +K++ L+ LP + KK K + + ++
Sbjct: 496 DVIFRQAENIKILKDGMDVEVRVLKRRDLATVLPPEEVALLPPPEKKRKSIRKASEESAE 555
Query: 545 --AKKRKSDQA 553
+K+ K D A
Sbjct: 556 NPSKRIKEDDA 566
>gi|156342919|ref|XP_001620975.1| hypothetical protein NEMVEDRAFT_v1g176602 [Nematostella vectensis]
gi|156206500|gb|EDO28875.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 303/513 (59%), Positives = 364/513 (70%), Gaps = 35/513 (6%)
Query: 10 MQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSS 69
M +S PQ ++G+T+A++ + P DL+ T+ L E L PY V E+++EL
Sbjct: 1 MMSSSTAGSNPPQK----SFGVTSAISHAGPKPRDLELTKRLEEALIPYGVFESEDELQQ 56
Query: 70 RMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVA 129
RM VL+KLN LVKEWI EVSI K +P VA+ VGGKI+TFGS+ LGVH KGAD L VA
Sbjct: 57 RMIVLAKLNELVKEWIVEVSIKKKMPENVAKTVGGKIFTFGSFILGVHTKGAD--TLLVA 114
Query: 130 PRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPD 189
P H+DRAD+FSSF++ LK +V +LRAVE AFVPVIK+ F IE+D+LFARLA EIPD
Sbjct: 115 PHHIDRADFFSSFYDLLKNHPDVRELRAVENAFVPVIKLIFCDIEVDLLFARLASPEIPD 174
Query: 190 DMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNV 249
++DL D+ LLKNLD KCVRSLNGCRVTDEILR VPNIE+FRL L +KLWAKKHG+YSNV
Sbjct: 175 NLDLLDENLLKNLDPKCVRSLNGCRVTDEILRQVPNIESFRLTLNAVKLWAKKHGVYSNV 234
Query: 250 LGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKK---PDNVNLGF 306
LG+LGGVSWAMLVAR CQLYPNAAASTL+ KFFLVFS+W+WP PVLLK P LGF
Sbjct: 235 LGFLGGVSWAMLVARTCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGF 294
Query: 307 PVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM 366
WDPR N DRYHLMPIITPAYPQQNSTFNVS+STR IM +EF G +ED+ +GK
Sbjct: 295 KNWDPRTNPGDRYHLMPIITPAYPQQNSTFNVSMSTRKIMCDEFFIGLKNTEDVISGKAN 354
Query: 367 WDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVN 426
WD+LF PNFF KYRHY+VL ASS + E+ LEW GL+ESKVR LI LE N +I LAHVN
Sbjct: 355 WDRLFTPPNFFHKYRHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKLAHVN 414
Query: 427 PECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLT 485
P+ Y + +EG++ + WFIGL F NV +NLT
Sbjct: 415 PKSYGP-------------LDSEGEKH------------VTRWFIGLMFEKLENVNINLT 449
Query: 486 YDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKK 518
Y+IQ F N VH QA + M K+GM E +HV++
Sbjct: 450 YEIQMFKNKVHAQAVKIMMFKEGMVTEAKHVRR 482
>gi|156405096|ref|XP_001640568.1| predicted protein [Nematostella vectensis]
gi|156227703|gb|EDO48505.1| predicted protein [Nematostella vectensis]
Length = 486
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 297/501 (59%), Positives = 359/501 (71%), Gaps = 33/501 (6%)
Query: 10 MQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSS 69
M +S PQ ++G+T+A++ + P DL+ T+ L E L PY V E+++EL
Sbjct: 1 MMSSSTAGSNPPQK----SFGVTSAISHAGPKPRDLELTKRLEEALIPYGVFESEDELQQ 56
Query: 70 RMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVA 129
RM VL+KLN LVKEWI EVSI KN+P VA+ VGGKI+TFGS+RLGVH KGADID L VA
Sbjct: 57 RMIVLAKLNELVKEWIVEVSIKKNMPENVAKTVGGKIFTFGSFRLGVHTKGADIDTLLVA 116
Query: 130 PRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPD 189
PRH+DRAD+FSSF++ LK +V +LRAVE AFVPVIK+ F IE+D+LFARLA EIPD
Sbjct: 117 PRHIDRADFFSSFYDLLKNHPDVRELRAVENAFVPVIKLIFCDIEVDLLFARLASPEIPD 176
Query: 190 DMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNV 249
++DL D+ LLKNLD KCVRSLNGCRVTDEILR VPNIE+FRL LR +KLWAKKHG+YSNV
Sbjct: 177 NLDLLDENLLKNLDPKCVRSLNGCRVTDEILRQVPNIESFRLTLRAVKLWAKKHGVYSNV 236
Query: 250 LGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKK---PDNVNLGF 306
LG+LGGVSWA+LVAR CQLYPNAAASTL+ KFFLVFS+W+WP PVLLK P LGF
Sbjct: 237 LGFLGGVSWAILVARTCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGF 296
Query: 307 PVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM 366
+WDPR N DRYHLMPIITPAYPQQN +F+VS+STR IM +EF +ED+ +GK
Sbjct: 297 QIWDPRTNPGDRYHLMPIITPAYPQQNFSFSVSMSTRKIMCDEFFIRLKNTEDVISGKAN 356
Query: 367 WDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVN 426
WD LF PNFF KY+HY+VL ASS + E+ LEW GL+ESKVR LI LE N +I LAHVN
Sbjct: 357 WDILFTPPNFFHKYKHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKLAHVN 416
Query: 427 PECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLT 485
P+ Y + +EG++ + WFIGL NV +NLT
Sbjct: 417 PKSYGP-------------LDSEGEKH------------VTRWFIGLMCEKLENVNINLT 451
Query: 486 YDIQHFTNAVHWQATQSKMMK 506
Y+IQ F N VH QA + M+K
Sbjct: 452 YEIQMFENKVHTQAVKIMMLK 472
>gi|170040884|ref|XP_001848213.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167864495|gb|EDS27878.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 395
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/400 (67%), Positives = 321/400 (80%), Gaps = 9/400 (2%)
Query: 31 MTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSI 90
MT+A++L+ P D +T EL + L+PYNV E + +L+ RME+LSKLN LVK+W++ VSI
Sbjct: 1 MTSAISLAEPKTEDHTKTVELQKSLEPYNVFEDESKLNHRMEILSKLNTLVKQWVRNVSI 60
Query: 91 AKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVD 150
+KN+P +AEK+GGKIYTFGSYRL V+HKG +IDALCVAPR+++R DYF SFFE LK
Sbjct: 61 SKNMPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCVAPRNIERQDYFGSFFELLKKQP 120
Query: 151 EVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSL 210
E RAVEEA VPV+KM FDGI+ID+LFARLALKEIPD+ DLR+DMLLKNLD K VRSL
Sbjct: 121 EY---RAVEEALVPVVKMKFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLVRSL 177
Query: 211 NGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYP 270
NGCR TDEILR VPNI+NFRLALR+IKLWAKKHGIYSN LGY GGVSW MLVAR CQL P
Sbjct: 178 NGCRATDEILRPVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVARTCQL-P 236
Query: 271 NAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYP 330
N A+T V KFFLVF +WKWPQPV LK+PD VNLGF VWD RVNV DR+HLM IITPAYP
Sbjct: 237 NVVAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAYP 296
Query: 331 QQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASS 390
QQNSTF+VS STR +M EF I+++I GK WDKLFE P+FF KYR+++VL+ +S
Sbjct: 297 QQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKAGWDKLFEAPSFFFKYRYFIVLLVTS 356
Query: 391 VSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ +D LE ESK+R+LI NLER HINLAHVNP+C+
Sbjct: 357 NNTDDHLE-----ESKIRYLIQNLERILHINLAHVNPKCF 391
>gi|348529712|ref|XP_003452357.1| PREDICTED: poly(A) polymerase gamma-like [Oreochromis niloticus]
Length = 763
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 279/521 (53%), Positives = 348/521 (66%), Gaps = 84/521 (16%)
Query: 21 PQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
P Q P YG+T+A++L+PP ++D T++L + +KP+ V E +EEL+ R+ VL KLNN
Sbjct: 9 PSGQQPQKHYGITSAISLAPPREIDHHYTKKLCDAMKPFGVFEDEEELNHRLAVLGKLNN 68
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF 139
VKEWI E+S KN+PP+ VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R D+F
Sbjct: 69 FVKEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERTDFF 128
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
SFFEKLK +E+ DLRAVE+AFVPVIK FDGIEID+LFARLAL+ IPD++DLR D +L
Sbjct: 129 QSFFEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSIL 188
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+NLD +C+RSLNGCRVTDEIL LVPN ENFRL LR IKLWAK+ GIYSN+LG+LGGVSWA
Sbjct: 189 RNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWA 248
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
MLVAR CQLYPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRV+
Sbjct: 249 MLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVS----- 303
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
ITP + +
Sbjct: 304 -----ITPVF----------------------------------------------YLLM 312
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIAN 439
HY+VL AS+ + E+ LEW GL+ESK+R L+GNLERN +I LAHVNP+ + +
Sbjct: 313 VLHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS------ 366
Query: 440 GSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAV 495
KE EN SMWFIG+ F A +V ++LTYDIQ FT+ V
Sbjct: 367 -----------KENRNEN------DFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTV 409
Query: 496 HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKT 536
+ QA M+K+GMKIE HVKKKQL +YLP +++K K++
Sbjct: 410 YRQANNINMLKEGMKIEATHVKKKQLHQYLPPEVVQKKKRS 450
>gi|37595378|gb|AAQ94575.1| polyA polymerase alpha [Danio rerio]
Length = 386
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/382 (68%), Positives = 310/382 (81%), Gaps = 9/382 (2%)
Query: 7 SNSMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEE 66
++ +QT++P P YG+T+ ++L+PP + DL TR+L E L+P+ V E + E
Sbjct: 6 TSQVQTAQP---------TPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELE 56
Query: 67 LSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDAL 126
L R+ VL KLN LVK WI+EVS AKNIP +V + VGGKI+TFGSYRLGVH KGADIDAL
Sbjct: 57 LQRRILVLGKLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDAL 116
Query: 127 CVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKE 186
CVAPRHV+R D+FSSF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+
Sbjct: 117 CVAPRHVERTDFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQT 176
Query: 187 IPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIY 246
IP+++DLRDD LLKNLD +C+RSLNGCRVTDEIL LVPNIENFRL LR IKLWAK+H IY
Sbjct: 177 IPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIY 236
Query: 247 SNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGF 306
SN+LG+LGGVSWAMLVAR CQLYPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL
Sbjct: 237 SNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNL 296
Query: 307 PVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM 366
PVWDPRV +DRYHLMPIITPAYPQQNST+NVS STR IM EEFK+G I+++I K
Sbjct: 297 PVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKAD 356
Query: 367 WDKLFETPNFFTKYRHYLVLIA 388
W KLFE PNFF KY++ L I+
Sbjct: 357 WSKLFEAPNFFQKYKYVLSCIS 378
>gi|50925416|gb|AAH79525.1| Papolb protein [Danio rerio]
Length = 435
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/382 (68%), Positives = 310/382 (81%), Gaps = 9/382 (2%)
Query: 7 SNSMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEE 66
++ +QT++P P YG+T+ ++L+PP + DL TR+L E L+P+ V E + E
Sbjct: 6 TSQVQTAQP---------TPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELE 56
Query: 67 LSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDAL 126
L R+ VL KLN LVK WI+EVS AKNIP +V + VGGKI+TFGSYRLGVH KGADIDAL
Sbjct: 57 LQRRILVLGKLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDAL 116
Query: 127 CVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKE 186
CVAPRHV+R D+FSSF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+
Sbjct: 117 CVAPRHVERTDFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQT 176
Query: 187 IPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIY 246
IP+++DLRDD LLKNLD +C+RSLNGCRVTDEIL LVPNIENFRL LR IKLWAK+H IY
Sbjct: 177 IPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIY 236
Query: 247 SNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGF 306
SN+LG+LGGVSWAMLVAR CQLYPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL
Sbjct: 237 SNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNL 296
Query: 307 PVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM 366
PVWDPRV +DRYHLMPIITPAYPQQNST+NVS STR IM EEFK+G I+++I K
Sbjct: 297 PVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKAD 356
Query: 367 WDKLFETPNFFTKYRHYLVLIA 388
W KLFE PNFF KY++ L I+
Sbjct: 357 WSKLFEAPNFFQKYKYVLSCIS 378
>gi|38541302|gb|AAH62850.1| Papolb protein [Danio rerio]
Length = 436
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/382 (68%), Positives = 310/382 (81%), Gaps = 9/382 (2%)
Query: 7 SNSMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEE 66
++ +QT++P P YG+T+ ++L+PP + DL TR+L E L+P+ V E + E
Sbjct: 6 TSQVQTAQP---------TPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELE 56
Query: 67 LSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDAL 126
L R+ VL KLN LVK WI+EVS AKNIP +V + VGGKI+TFGSYRLGVH KGADIDAL
Sbjct: 57 LQRRILVLGKLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDAL 116
Query: 127 CVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKE 186
CVAPRHV+R D+FSSF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+
Sbjct: 117 CVAPRHVERTDFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQT 176
Query: 187 IPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIY 246
IP+++DLRDD LLKNLD +C+RSLNGCRVTDEIL LVPNIENFRL LR IKLWAK+H IY
Sbjct: 177 IPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIY 236
Query: 247 SNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGF 306
SN+LG+LGGVSWAMLVAR CQLYPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL
Sbjct: 237 SNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNL 296
Query: 307 PVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM 366
PVWDPRV +DRYHLMPIITPAYPQQNST+NVS STR IM EEFK+G I+++I K
Sbjct: 297 PVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKAD 356
Query: 367 WDKLFETPNFFTKYRHYLVLIA 388
W KLFE PNFF KY++ L I+
Sbjct: 357 WSKLFEAPNFFQKYKYVLSCIS 378
>gi|159154998|gb|AAI54504.1| Papolb protein [Danio rerio]
Length = 436
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/382 (68%), Positives = 310/382 (81%), Gaps = 9/382 (2%)
Query: 7 SNSMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEE 66
++ +QT++P P YG+T+ ++L+PP + DL TR+L E L+P+ V E + E
Sbjct: 6 TSQVQTAQP---------TPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELE 56
Query: 67 LSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDAL 126
L R+ VL KLN LVK WI+EVS AKNIP +V + VGGKI+TFGSYRLGVH KGADIDAL
Sbjct: 57 LQRRILVLGKLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDAL 116
Query: 127 CVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKE 186
CVAPRHV+R D+FSSF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+
Sbjct: 117 CVAPRHVERTDFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQT 176
Query: 187 IPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIY 246
IP+++DLRDD LLKNLD +C+RSLNGCRVTDEIL LVPNIENFRL LR IKLWAK+H IY
Sbjct: 177 IPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIY 236
Query: 247 SNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGF 306
SN+LG+LGGVSWAMLVAR CQLYPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL
Sbjct: 237 SNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNL 296
Query: 307 PVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM 366
PVWDPRV +DRYHLMPIITPAYPQQNST+NVS STR IM EEFK+G I+++I K
Sbjct: 297 PVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKAD 356
Query: 367 WDKLFETPNFFTKYRHYLVLIA 388
W KLFE PNFF KY++ L I+
Sbjct: 357 WSKLFEAPNFFQKYKYVLSCIS 378
>gi|193573537|ref|XP_001946233.1| PREDICTED: poly(A) polymerase gamma-like [Acyrthosiphon pisum]
Length = 640
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 376/555 (67%), Gaps = 32/555 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YGMT+A++ + P +D+Q T+ L + L V TDE+LS R+EVLS LNNL KEWI+EV
Sbjct: 2 YGMTSAISDALPTDIDIQLTKSLDDALSREKVITTDEDLSQRLEVLSMLNNLAKEWIREV 61
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S+ +N+P AE VGG + TFGSYRLGV+HKGADIDA+ + PRH+ R DYF++F+ KLK
Sbjct: 62 SMERNLPEITAENVGGLVCTFGSYRLGVYHKGADIDAIVIVPRHITRTDYFATFYNKLKE 121
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ ++RAVEEAFVPVIKM GIEIDMLFARLALKE+ +D DL+ D LL+NL+ KCVR
Sbjct: 122 NPSINNVRAVEEAFVPVIKMIIQGIEIDMLFARLALKEVHEDTDLQQDDLLRNLNPKCVR 181
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD ILRLVPN E+F+ L IKLWAK+H +YSN LGYLGGVSWAMLVAR+CQL
Sbjct: 182 SLNGCRVTDSILRLVPNRESFKKTLIAIKLWAKRHRVYSNALGYLGGVSWAMLVARVCQL 241
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAA +TL+ KFFL+FS+W+WPQPVLLK ++LG+PVWDPRVN+ADR H+MPIITP
Sbjct: 242 YPNAAPATLIHKFFLIFSKWQWPQPVLLKPSYFMDLGYPVWDPRVNMADRNHVMPIITPV 301
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNSTFNVS ST I+Q+EFK I +I G++ W K+F+ FFTKYR++L +
Sbjct: 302 YPQQNSTFNVSHSTLAIIQDEFKTSLDIMGEILTGESSWSKIFQPSKFFTKYRYFLAITV 361
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
+ E+ LEW GL+ES++R L +LE + +H+NP+ + P +
Sbjct: 362 FANCDEELLEWRGLVESRLRFLPTSLEEIECVQRSHLNPDQFV-----------LPYDKS 410
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAAN---VILNLTYDIQHFTNAVHWQATQSKMM 505
+G+ +S+WF+GL+ +N V L+ + I+ F V +A +
Sbjct: 411 QGRP-------------SSVWFVGLEISKSNGTVVNLDFSTHIRDFCLLVKSRA--HTIF 455
Query: 506 KDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKS--GDQNTSAKKRKSDQALDELGDKSRP 563
K GM I+V H+K+K L +Y+P LKK+K + G + + + ++ EL ++S+
Sbjct: 456 KAGMDIQVNHLKRKDLRDYVPDE-LKKEKAIPNTVGSKIIARLSTEGRHSVSELVEESQK 514
Query: 564 RLDSDSNSLSDKVNN 578
S + D+ ++
Sbjct: 515 SPTSRKRGIEDETDD 529
>gi|170051830|ref|XP_001861944.1| poly a polymerase [Culex quinquefasciatus]
gi|167872900|gb|EDS36283.1| poly a polymerase [Culex quinquefasciatus]
Length = 631
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 267/403 (66%), Positives = 314/403 (77%), Gaps = 17/403 (4%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T GMT+A++L+ D +T EL + L EL+ RME+L KLN LVK
Sbjct: 242 TLGMTSAISLAETKPEDHTKTVELQKAL----------ELNHRMEILPKLNTLVKH---- 287
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
+ ++ VA K+GGKIYTFGSYRLGV+HKGA+IDALCVAPR+++R DYF SFFE LK
Sbjct: 288 -AQCFHLKEHVA-KLGGKIYTFGSYRLGVNHKGANIDALCVAPRNIERLDYFGSFFELLK 345
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
EVT+ RAVEEA VPV+KMNFDGI+ID+LFARLALKEIP++ DL DDMLLKNLD K V
Sbjct: 346 KQPEVTECRAVEEALVPVVKMNFDGIKIDLLFARLALKEIPNNFDLGDDMLLKNLDPKLV 405
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCR TDEILRLVPNI+NFRLALR+IKLWAKKHGIYSN LGY GGVSW MLVAR CQ
Sbjct: 406 RSLNGCRATDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVARTCQ 465
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
L PN A+T V KFFLVF +WKWPQPV LK+PD VNLGF VWD RVNV DR+HLMPIITP
Sbjct: 466 L-PNVVAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMPIITP 524
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYPQ NSTF+VS STR +M EF G I+++I GK WDKLFE P+FF KYR+ +VL+
Sbjct: 525 AYPQPNSTFHVSSSTRKVMLNEFNSGMQITDEIMLGKAGWDKLFEAPSFFFKYRYVIVLL 584
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+S + +D LEWC ++ESK+R+LI NLER HINLAHVNP+C+
Sbjct: 585 VTSNNTDDHLEWCEMVESKIRYLIQNLERILHINLAHVNPKCF 627
>gi|340376009|ref|XP_003386526.1| PREDICTED: poly(A) polymerase gamma-like [Amphimedon queenslandica]
Length = 689
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 296/604 (49%), Positives = 387/604 (64%), Gaps = 45/604 (7%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + P D++ T L CL+ Y V +T E R+ VL KLN LVK+WI ++S
Sbjct: 11 GVTGPISTAVPKPQDIKLTNLLEACLQKYGVFDTPEGQKHRLLVLGKLNELVKKWIIDIS 70
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
K A++VGG I+TFGSYRLGVH KGADID L VAPRH++R D+FSSF E L
Sbjct: 71 KEKGKSEAEAKEVGGTIFTFGSYRLGVHGKGADIDTLLVAPRHIERTDFFSSFKELLFEA 130
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
VT++RAV +AFVPVIK+ FDG+E+D+LFARLAL IPD + L D LLKNLD KCVRS
Sbjct: 131 KNVTNVRAVPDAFVPVIKLEFDGVEMDLLFARLALPVIPDGLGLLDMSLLKNLDAKCVRS 190
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNGCRVTD IL+LVPN E FRLALR IKLWAK+ GIYSN LGYLGGVSWAMLVAR CQLY
Sbjct: 191 LNGCRVTDSILKLVPNQETFRLALRAIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQLY 250
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKP--DNVNLGFPVWDPRVNVADRYHLMPIITP 327
PNAA+ST+V KFF VF +W WPQPVLL+K D + L VW+P+VN D +HLMPIITP
Sbjct: 251 PNAASSTIVLKFFFVFEKWNWPQPVLLRKAEEDVLGLNLQVWNPQVNPGDAHHLMPIITP 310
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYPQQNSTFNV+ STR +M EF++G I DI GK WD LFE FF+ Y+HY+V+
Sbjct: 311 AYPQQNSTFNVTKSTRDVMLNEFRRGLDICRDIDVGKLSWDILFEPIKFFSLYKHYIVIC 370
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
A+++ ++ L+W GL+ESK+R LIG LE N +I +AHVNP Y P I
Sbjct: 371 ATAIDSDLLLKWSGLVESKIRILIGKLEDNENIKIAHVNPTSY-------------PRIV 417
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIA--ANVILNLTYDIQHFTNA-VHWQATQSKM 504
P + MWFIGL+F V + LTY+IQ F N+ V A QS
Sbjct: 418 ------------PDSTDSHLMWFIGLEFCVGPGGVNITLTYEIQMFINSVVKSPALQSSP 465
Query: 505 -MKDGMKIEVRHVKKKQLSEYLPAHM---LKKDKKTKSGDQNTSA---KKRKSDQALDEL 557
+++G +++V+H +++ LS+YL + L K KK D T + K+ + ++E
Sbjct: 466 DLRNGTQLDVKHARRRDLSDYLSPDIVPPLPKKKKQFPIDIETPSPILKRVHKIERVEEP 525
Query: 558 GDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECT----EDNSLSQVYGLNDSVADSIDNS 613
R ++ D +SL+D S G +++++ T +++SL + DS D S
Sbjct: 526 RVSKRIKIMDDPDSLTDS----SIGGGEATAKTTNVDEDESSLMSTGKIGSLNFDSADVS 581
Query: 614 LDDL 617
+ D+
Sbjct: 582 ITDI 585
>gi|339236667|ref|XP_003379888.1| poly(A) polymerase gamma [Trichinella spiralis]
gi|316977404|gb|EFV60513.1| poly(A) polymerase gamma [Trichinella spiralis]
Length = 923
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/517 (51%), Positives = 357/517 (69%), Gaps = 45/517 (8%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++++ P +LDL+++ EL L Y + E+D EL+ RMEVL K+N L ++WI+++
Sbjct: 209 YGITAPISMADPTELDLRQSEELERVLHEYGLFESDAELTHRMEVLRKVNLLFRQWIRDL 268
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
SI +N+PP VA+ VGGKI+TFGSYRLGVH +GADID LCVAPRH+ R D+F+SF + LK+
Sbjct: 269 SIQRNMPPDVADSVGGKIFTFGSYRLGVHTRGADIDTLCVAPRHILREDFFTSFKDLLKS 328
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
EV++ R +EEAFVPVIK+ FDGIE+DM+FARLALKE+P++ L DD LL+NLD KC+R
Sbjct: 329 QPEVSECRPIEEAFVPVIKLKFDGIELDMVFARLALKEVPENQKLDDDELLRNLDVKCIR 388
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAK-KHGIYSNVLGYLGGVSWAMLVARICQ 267
SLNGCRVTDEIL LVPN E FRL LR IK WAK K G+YSNV+G+LGGVSWAMLVAR CQ
Sbjct: 389 SLNGCRVTDEILNLVPNKETFRLTLRAIKFWAKRKKGVYSNVVGFLGGVSWAMLVARTCQ 448
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKP----DNVNLGFP--VWDPRVNVADRYHL 321
LYP AA + LV K +WP+PVLLK ++ +GF +WDPRV +DRYHL
Sbjct: 449 LYPRAAPNVLVNK--------EWPKPVLLKNSITSQNHGYIGFQELIWDPRVKQSDRYHL 500
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPA+PQQNSTFNVS +TR+I+Q+ +G +S ++ W KLFE NFF KY+
Sbjct: 501 MPIITPAFPQQNSTFNVSSTTRSILQKFLHEGFLVSTEVICKGLSWPKLFEPSNFFVKYK 560
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGS 441
HY+V+ + + D + W GL+ESK+R+LIG E N + LAHVNPE ++
Sbjct: 561 HYIVISCFAATRADLITWSGLVESKMRYLIGQFEHNTGVLLAHVNPEQFSPL-------- 612
Query: 442 GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF----IAANVILNLTYDIQHFTNAVHW 497
EE G+ GV S W +GL+ I A I +LT DIQ F +++
Sbjct: 613 ----------EEHGD-------GVESFWVVGLEMNKEGIGAKNI-DLTSDIQSFVDSIMR 654
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
QA S + + GMK+E ++ ++++L+ LP +L +++
Sbjct: 655 QALNSDVWRQGMKVEAKYRRRRELTRILPLSVLNQNR 691
>gi|3127182|gb|AAC16061.1| poly(A) polymerase II [Gallus gallus]
Length = 621
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/440 (60%), Positives = 328/440 (74%), Gaps = 28/440 (6%)
Query: 129 APRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIP 188
APRHV+R+D+F+SF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 2 APRHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP 61
Query: 189 DDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSN 248
+D+DLRDD LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN
Sbjct: 62 EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSN 121
Query: 249 VLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPV 308
+LG+LGGVSWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PV
Sbjct: 122 ILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPV 181
Query: 309 WDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWD 368
WDPRVN +DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W
Sbjct: 182 WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWS 241
Query: 369 KLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE 428
KLFE PNFF KY+HY+VL+AS+ + + +LEW GL+ESK+R L+GNLE+N I LAHVNP+
Sbjct: 242 KLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQ 301
Query: 429 CYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNL 484
+ +P+ + +E +MW IGL F + N+ ++L
Sbjct: 302 SF-----------PAPKENPDKEE------------YRTMWVIGLVFKKTENSENLSVDL 338
Query: 485 TYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNT 543
TYDIQ FT+ V+ QA SKM + MKI RHVK+KQL + LP H+L+K KK + G + T
Sbjct: 339 TYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQLHQLLPNHVLQKKKKHSTEGVRLT 398
Query: 544 SAKKRKSDQALDELGDKSRP 563
+ D ++D S P
Sbjct: 399 ALNDSSLDLSMDSDNSTSVP 418
>gi|1256822|gb|AAC52586.1| poly(A) polymerase III [Mus musculus]
Length = 375
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/365 (70%), Positives = 305/365 (83%), Gaps = 1/365 (0%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E L P+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLLPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRH 382
KY++
Sbjct: 369 QKYKY 373
>gi|755872|gb|AAA64708.1| poly(A) polymerase [Xenopus laevis]
Length = 394
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/364 (70%), Positives = 304/364 (83%), Gaps = 2/364 (0%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G QSQ TYG+T+ ++L+ P D T++L E LKPY V E ++EL R+ +L KLN
Sbjct: 9 GSQQSQK--TYGITSPISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILILGKLN 66
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADY 138
NLVKEWI+E+S KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+
Sbjct: 67 NLVKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDF 126
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
FSSF+EKLK +EV DLR+VEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD L
Sbjct: 127 FSSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSL 186
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
LKNLD +C+RSLNGCRVTDEIL LVPNI++FRL LR IKLWAK+H IYSN+LG+LGGVSW
Sbjct: 187 LKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSW 246
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DR
Sbjct: 247 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 306
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLF+ PNFF
Sbjct: 307 YHLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQ 366
Query: 379 KYRH 382
KY++
Sbjct: 367 KYKY 370
>gi|1709575|sp|P51006.1|PAPO3_XENLA RecName: Full=Poly(A) polymerase type 3; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|643648|gb|AAC59747.1| poly(A) polymerase type 3, partial [Xenopus laevis]
Length = 400
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 257/364 (70%), Positives = 302/364 (82%), Gaps = 2/364 (0%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G QSQ TYG+T+ ++L+ P D T++L E LKPY V E ++EL R+ L KLN
Sbjct: 9 GSQQSQK--TYGITSPISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILSLGKLN 66
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADY 138
NLVKEWI+E+S KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 67 NLVKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDL 126
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
FSSF+EKLK +EV DLR+VEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD L
Sbjct: 127 FSSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSL 186
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
LKNLD +C+RSLNGCRVTDEIL LVPNI++FRL LR IKLWAK+H IYSN+LG+LGGVSW
Sbjct: 187 LKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSW 246
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DR
Sbjct: 247 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 306
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLF+ PNFF
Sbjct: 307 YHLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQ 366
Query: 379 KYRH 382
KY++
Sbjct: 367 KYKY 370
>gi|170593997|ref|XP_001901750.1| Poly polymerase central domain containing protein [Brugia malayi]
gi|158590694|gb|EDP29309.1| Poly polymerase central domain containing protein [Brugia malayi]
Length = 842
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/610 (43%), Positives = 380/610 (62%), Gaps = 34/610 (5%)
Query: 12 TSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRM 71
T + + GK G++ +++S P++ D+ + +L E L+ ET+EE++ R+
Sbjct: 132 TDRGNSIGKDNRLTTTYLGVSQPISISGPDEFDIVMSTKLDEYLQANGYFETEEEMNLRL 191
Query: 72 EVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPR 131
+VLSK+N VK+W++ VS + +P + + VGGK++TFGSYRL VH +GADID+LCVAPR
Sbjct: 192 KVLSKINAYVKKWVRIVSKRRQMPDSEIQSVGGKLFTFGSYRLNVHTRGADIDSLCVAPR 251
Query: 132 HVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDM 191
HVDR D+F+SF+E L T+LR V+EAFVPVIK+ + GIE+D+LFARLAL +P+D
Sbjct: 252 HVDRNDFFTSFYEMLAEDPNTTELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQ 311
Query: 192 DLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLG 251
L DD +L+NLD+K VRSLNGCRV DEILRLVPNI NF ALR IKLWAK HGIYSNVLG
Sbjct: 312 QLNDDSILRNLDEKSVRSLNGCRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLG 371
Query: 252 YLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKP------DNVNLG 305
YLGGVSWA+LVAR CQLYPN + LV KFFL++++W+WP PV+LK+ D +L
Sbjct: 372 YLGGVSWAILVARTCQLYPNTGPARLVQKFFLLYTKWEWPHPVVLKETEISHARDMPSLQ 431
Query: 306 FPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKT 365
VWDPR DR+HLMPI+TPA+PQQNSTFNV+ S+ I+ E ++G DI GKT
Sbjct: 432 ELVWDPRSRSGDRFHLMPIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKT 491
Query: 366 MWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHV 425
W LFE NFF++Y+H+L L+ S + +D+L WCGL+ESK+R LI +LER I + HV
Sbjct: 492 GWSALFEEVNFFSRYKHFLALLCLSATEQDELVWCGLVESKIRFLIASLERRESIRVCHV 551
Query: 426 NPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNL 484
+ + Y N +++ + +WFIGLD + +++
Sbjct: 552 HTKYYQPR-----NDPFPVQVSLQNPR-------------CRLWFIGLDLNKTVSRKIDI 593
Query: 485 TYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTS 544
+++Q F + ++ AT + +GM + +++K +L ++L L + KK + +
Sbjct: 594 QHEVQSFMDLLNSMATTQNIYVEGMSVIPHYLRKAELVKWLKMEDLTRGKKAPKRRRIAT 653
Query: 545 AKKRKSDQALDELGDKSRPRLDS--DSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGL 602
++ + QA L +K+R S NS + S +G + S D ++S
Sbjct: 654 SQNQ---QATGPLQNKTRSETSSIASCNSSGAASPSTSLSGTEVSKNVQNDLAMSSTV-- 708
Query: 603 NDSVADSIDN 612
SV +IDN
Sbjct: 709 --SVPTAIDN 716
>gi|312067061|ref|XP_003136565.1| hypothetical protein LOAG_00977 [Loa loa]
gi|307768265|gb|EFO27499.1| hypothetical protein LOAG_00977 [Loa loa]
Length = 859
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/587 (44%), Positives = 368/587 (62%), Gaps = 38/587 (6%)
Query: 12 TSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRM 71
T + + +GK G++ +++S P++ D+ + +L E L+ ET+EE++ R+
Sbjct: 136 TGRGNSNGKDNKLTTTYLGVSQPISISGPDEFDIVMSAKLDEYLQANGYFETEEEMNLRL 195
Query: 72 EVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPR 131
+VLSK+N VK+W++ VS + +P + + VGGK++TFGSYRL VH +GADID+LCVAPR
Sbjct: 196 KVLSKINAYVKKWVRVVSKRRQMPDSEVQSVGGKLFTFGSYRLNVHTRGADIDSLCVAPR 255
Query: 132 HVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDM 191
HVDR D+F+SF+E L T+LR V+EAFVPVIK+ + GIE+D+LFARLAL +P+D
Sbjct: 256 HVDRNDFFTSFYEMLAEDPNTTELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQ 315
Query: 192 DLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLG 251
L DD +L+NLD+K VRSLNGCRV DEILRLVPN+ NF ALR IKLWAK HGIYSNVLG
Sbjct: 316 QLNDDSILRNLDEKSVRSLNGCRVADEILRLVPNVSNFTYALRAIKLWAKNHGIYSNVLG 375
Query: 252 YLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKP------DNVNLG 305
YLGGVSWA+LVAR CQLYPN + LV KFFL++++W+WP PV+LK+ D L
Sbjct: 376 YLGGVSWAILVARTCQLYPNTGPARLVQKFFLLYTKWEWPHPVVLKETEVSHARDMPALQ 435
Query: 306 FPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKT 365
VWDPR DR+HLMPI+TPA+PQQNSTFNV+ S+ I+ E ++G DI GK
Sbjct: 436 ELVWDPRSRSGDRFHLMPIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKA 495
Query: 366 MWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHV 425
W LFE NFF++Y+H+L L+ S + +D+L WCGL+ESK+R LI +LER I + HV
Sbjct: 496 EWSALFEEVNFFSRYKHFLALLCLSATEQDELVWCGLVESKIRFLIASLERRESIRVCHV 555
Query: 426 NPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNL 484
+ + Y N +++ + +WFIGLD + +++
Sbjct: 556 HTKYYQPR-----NDPLPVQVSLQNPR-------------CRLWFIGLDLNKTVSRKIDI 597
Query: 485 TYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTS 544
+++Q F + ++ AT + +GM + +++K +L ++L L K +K
Sbjct: 598 QHEVQSFMDLLNSMATTQNIYVEGMSVIPHYLRKAELVKWLKMEDLTKGRK--------- 648
Query: 545 AKKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECT 591
A KR+ A +P S S + S+ + S N ++S CT
Sbjct: 649 APKRRRIAA----SQNQQPIGPSQSKARSETSSITSCNSSGAASPCT 691
>gi|355709247|gb|AES03528.1| poly polymerase gamma [Mustela putorius furo]
Length = 603
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/393 (62%), Positives = 294/393 (74%), Gaps = 27/393 (6%)
Query: 147 KTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKC 206
K D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C
Sbjct: 1 KHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRC 60
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARIC 266
+RSLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR C
Sbjct: 61 IRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTC 120
Query: 267 QLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIIT 326
QLYPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIIT
Sbjct: 121 QLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIIT 180
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVL 386
PAYPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL
Sbjct: 181 PAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVL 240
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEI 446
AS+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 241 TASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG-------------- 286
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQS 502
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA
Sbjct: 287 ---NKEHHKDN------NYISMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNI 337
Query: 503 KMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
M+K+GMKIE HVKKKQL YLPA +L+K KK
Sbjct: 338 NMLKEGMKIEATHVKKKQLHHYLPAEILQKKKK 370
>gi|313243939|emb|CBY14824.1| unnamed protein product [Oikopleura dioica]
Length = 630
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/592 (44%), Positives = 373/592 (63%), Gaps = 47/592 (7%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T+AL++ P + D T +L + ++PY +T + LS R++VL+KLN LVK+++++V
Sbjct: 2 FGITSALSVEGPTEKDKVMTEDLQKTIEPYGAFDTPDGLSHRIQVLTKLNELVKDFVRKV 61
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
+ +P + ++GGKIYTFGSYRLGVH DID LCV P+HV R +F+ F + LK
Sbjct: 62 AKECRLPEHLHGELGGKIYTFGSYRLGVHTSDGDIDTLCVVPQHVTRHHFFTIFLDMLKK 121
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLAL-KEIPDDMDLRDDMLLKNLDQKCV 207
+ VT+ R + EAFVP+IK+ FDGI++D+LFARLA ++P+D DLR+ +L+NL++KCV
Sbjct: 122 TEGVTECRDIREAFVPLIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLEEKCV 181
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTDEIL LVPNIE FRL LR +KLWA++ GIY N LG++GGV WAMLVAR CQ
Sbjct: 182 RSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVARTCQ 241
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGF--PVWDPRVNVADRYHLMPII 325
LYPNAA STL+ KFFL+FS+W WP+PV LK P++ GF PVWDPR N DR HLMPII
Sbjct: 242 LYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRFNPLDRSHLMPII 301
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYN--------GKTMWDKLFETPNFF 377
TPAYP QNSTFNVS ST ++M++E K ++ I +W LF +FF
Sbjct: 302 TPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTRLWADLFTRTDFF 361
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+H++VL A++ E +W GL+ES +R L+ +LERN +I +AHVN +
Sbjct: 362 NKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEYILIAHVNVDS-------- 413
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVI--LNLTYDIQHFTNAV 495
I + EEG SP WF+GL F V +NLT DIQ FT+ +
Sbjct: 414 --------IELDPAEEG---QSP---RYVCRWFLGLSFHRCEVKPNINLTSDIQRFTDLL 459
Query: 496 HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHML--------KKDKKTKSGDQNTS--- 544
H A M++E R+VK+ L ++L + K+ +K+K+ QN S
Sbjct: 460 HQAAISHNNYTPDMRVEARYVKRHNLVKFLTPELARTLKLSKSKEGRKSKTNAQNQSNGN 519
Query: 545 AKKRKSDQALDELGDKSRPRLDSDSNSLS-DKVNNISNNGDQSSSECTEDNS 595
KK + ++ + +++ +L++ +S++ K I+ N D +E + NS
Sbjct: 520 TKKAEESESKNSQSKENKEKLETHQSSITMAKDIAITTNFDGQRTERSVKNS 571
>gi|395823522|ref|XP_003785035.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Otolemur garnettii]
Length = 735
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 260/501 (51%), Positives = 338/501 (67%), Gaps = 37/501 (7%)
Query: 40 PNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVA 99
P D +R + L E KP VSE +EEL R+ + KLNNLVKEWI+ ++ +K +P V
Sbjct: 29 PQGTDCKRLQRLTETXKPSGVSEEEEELQCRILIWGKLNNLVKEWIRGLNESKKLPXPVT 88
Query: 100 EKVGGKIYTFGSYRLGVHH------KGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVT 153
E VG + + HH KGAD DALC PRHV+ D+F+SF+EKLK +EV
Sbjct: 89 ENVGRNFFLLVNQ---CHHLLSGLTKGADTDALCAVPRHVNXRDFFTSFYEKLKLQEEVK 145
Query: 154 DLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGC 213
DLRAVEEAFVPVIK+ FDG +ID+LFARLAL+ IP+D+DL DD LLK LD +C+RSLNGC
Sbjct: 146 DLRAVEEAFVPVIKLCFDGTKIDILFARLALQTIPEDLDLXDDSLLKRLDIRCIRSLNGC 205
Query: 214 RVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA 273
++T+EIL LV N++NFRL LR IKLWAK H +YSN+LG++ GVSWAML AR CQLYP A
Sbjct: 206 KITNEILHLVSNMDNFRLTLRCIKLWAKHHTVYSNILGFVTGVSWAMLGARTCQLYPIAM 265
Query: 274 ASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQN 333
ASTLV FFLVFS+W+ P PVL+K+P+ NL PVWD RVN +DRY PIITPAYPQQN
Sbjct: 266 ASTLVHXFFLVFSKWEXPNPVLVKQPEKCNLNLPVWDSRVNPSDRYQFAPIITPAYPQQN 325
Query: 334 STFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSA 393
ST++ SIST+ ++ EEFK +I++ + + K KLFE P FF KY+ Y+VL+A + +
Sbjct: 326 STYSASISTQMVVVEEFKXSLSITDXLLS-KVEXSKLFEAPIFFQKYKDYIVLLAGAPTE 384
Query: 394 EDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEE 453
+ +LEW GL+ESK+ LIG+LE+N I LAHVNP+ + +P+ + KE
Sbjct: 385 KQRLEWVGLVESKIXILIGSLEKNEFITLAHVNPQAFP-----------APKENPDKKE- 432
Query: 454 GGENTSPPVSGVASMWFIGLDFIAA----NVILNLTYDIQHFTNAVHWQATQSKMMKDGM 509
++W IGL F N+ +NL +DIQ FT+ V+ QA SKM + M
Sbjct: 433 -----------FCTVWVIGLVFKKTENYKNLSVNLXHDIQAFTDTVYRQARNSKMFEVDM 481
Query: 510 KIEVRHVKKKQLSEYLPAHML 530
+I HVK+KQL + LP H+L
Sbjct: 482 RIAATHVKRKQLHQLLPKHVL 502
>gi|313216525|emb|CBY37820.1| unnamed protein product [Oikopleura dioica]
Length = 643
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/605 (43%), Positives = 373/605 (61%), Gaps = 60/605 (9%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T+AL++ P + D T +L + ++PY +T + LS R++VL+KLN LVK+++++V
Sbjct: 2 FGITSALSVEGPTEKDKVMTEDLQKTIEPYGAFDTPDGLSHRIQVLTKLNELVKDFVRKV 61
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
+ +P + ++GGKIYTFGSYRLGVH DID LCV P+HV R +F+ F + LK
Sbjct: 62 AKECRLPEHLHGELGGKIYTFGSYRLGVHTSDGDIDTLCVVPQHVTRHHFFTIFLDMLKK 121
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDDMDLRDDMLLKNLDQKCV 207
+ VT+ R + EAFVP+IK+ FDGI++D+LFARLA ++P+D DLR+ +L+NL++KCV
Sbjct: 122 TEGVTECRDIREAFVPLIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLEEKCV 181
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARIC- 266
RSLNGCRVTDEIL LVPNIE FRL LR +KLWA++ GIY N LG++GGV WAMLVAR C
Sbjct: 182 RSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVARTCQ 241
Query: 267 ------------QLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGF--PVWDPR 312
QLYPNAA STL+ KFFL+FS+W WP+PV LK P++ GF PVWDPR
Sbjct: 242 VGLSCLEFLAIFQLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPR 301
Query: 313 VNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYN--------GK 364
N DR HLMPIITPAYP QNSTFNVS ST ++M++E K ++ I
Sbjct: 302 FNPLDRSHLMPIITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNT 361
Query: 365 TMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+W LF +FF KY+H++VL A++ E +W GL+ES +R L+ +LERN +I +AH
Sbjct: 362 RLWADLFTRTDFFNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEYILIAH 421
Query: 425 VNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVI--L 482
VN + I + EEG SP WF+GL F V +
Sbjct: 422 VNVDS----------------IELDPAEEG---QSP---RYVCRWFLGLSFHRCEVKPNI 459
Query: 483 NLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHML--------KKDK 534
NLT DIQ FT+ +H A M++E R+VK+ L ++L + K+ +
Sbjct: 460 NLTSDIQRFTDLLHQAAISHNNYTPDMRVEARYVKRHNLVKFLTPELARTLKLSKSKEGR 519
Query: 535 KTKSGDQNTS---AKKRKSDQALDELGDKSRPRLDSDSNSLS-DKVNNISNNGDQSSSEC 590
K+K+ QN S KK + ++ + +++ +L++ +S++ K I+ N D +E
Sbjct: 520 KSKTNAQNQSNGNTKKAEESESKNSQSKENKEKLETHQSSITMAKDIAITTNFDGQRTER 579
Query: 591 TEDNS 595
+ NS
Sbjct: 580 SVKNS 584
>gi|170061473|ref|XP_001866247.1| poly a polymerase [Culex quinquefasciatus]
gi|167879711|gb|EDS43094.1| poly a polymerase [Culex quinquefasciatus]
Length = 554
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/415 (60%), Positives = 303/415 (73%), Gaps = 34/415 (8%)
Query: 20 KPQSQ----APVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLS 75
+PQ Q A GMT+A++L+ P + D +T EL + L+PYNV E + +L+ RME+LS
Sbjct: 166 RPQQQHRLAATKLMGMTSAISLAEPKKEDHTKTVELQKALEPYNVFEDESKLNHRMEILS 225
Query: 76 KLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR 135
KLN LVK+W++ VSI+KN+P +AEK+GGKIYTFGSYRL V+HKG +IDALCVAPR+++R
Sbjct: 226 KLNTLVKQWVRNVSISKNMPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCVAPRNIER 285
Query: 136 ADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRD 195
DYF SFFE LK E RAVEEA VPV+KM FDGI+ID+LFARLALKEIPD DLR+
Sbjct: 286 QDYFGSFFELLKKQPEY---RAVEEALVPVVKMKFDGIKIDLLFARLALKEIPDKFDLRE 342
Query: 196 DMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGG 255
DMLLKNLD K VRSLNGCR TDEILR VPNI+NFRLAL +HGIYSN LGY GG
Sbjct: 343 DMLLKNLDPKLVRSLNGCRATDEILRPVPNIDNFRLAL--------QHGIYSNSLGYFGG 394
Query: 256 VSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
VSWAMLVAR CQL N A+T V K FLVFS+WK Q NLGF +WDPRVNV
Sbjct: 395 VSWAMLVARTCQLL-NVVAATQVHKCFLVFSRWKLRQ----------NLGFQLWDPRVNV 443
Query: 316 ADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPN 375
++HLM IITPAYPQQNSTF+VS STR +M EF +G I+++I K WDKL T +
Sbjct: 444 QGQFHLMSIITPAYPQQNSTFHVSRSTRKVMLNEFNRGMQITDEIMLDKAGWDKLIATLS 503
Query: 376 FFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ T + +S + +D LEWCGL+ESK+R+LI NLER INLAHV P+C+
Sbjct: 504 YST--------LVTSNNTDDHLEWCGLVESKIRYLIQNLERILPINLAHVKPKCF 550
>gi|348506632|ref|XP_003440862.1| PREDICTED: poly(A) polymerase alpha-like [Oreochromis niloticus]
Length = 601
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/559 (44%), Positives = 350/559 (62%), Gaps = 56/559 (10%)
Query: 26 PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
P TYG+T ++ P + +L +TR+L + +K YNV E + E R V +L +L ++W+
Sbjct: 2 PKTYGLTGPISEDLPEEENLIQTRKLLDTMKSYNVYENNLEFEHRERVFRRLESLFRDWL 61
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
KE+ I N+P V EKVGGKI+ FGSY LGVH KGADIDALCV P ++R +F+SFF K
Sbjct: 62 KEICIEMNVPEVVTEKVGGKIFPFGSYHLGVHSKGADIDALCVGPGFLERKAFFTSFFAK 121
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
LK EV D++A+EEA+VPVI ++++GI+ID++FA L+ + +PD++DL ++ ++K++D +
Sbjct: 122 LKAQKEVKDIQAIEEAYVPVITLSWEGIQIDLVFALLSRRSVPDNLDLLNNSIVKDIDIR 181
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
CVRS NG RVT++ILRLVPN+ NFR+ALR IKLWAK+ IYSN LG+LGGVSWA++VARI
Sbjct: 182 CVRSFNGYRVTEQILRLVPNVLNFRVALRAIKLWAKQRNIYSNKLGFLGGVSWAIMVARI 241
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQ+YPNA STLV KFF +FS W WP P+ L + + N P WDP+VN +DR HLMPII
Sbjct: 242 CQVYPNATTSTLVIKFFKIFSMWVWPIPIRLIEVEKCNYNLPFWDPKVNQSDRCHLMPII 301
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYPQQN++ NVS ST I+ EE +G I ++I K W +LFE +FF KY+HY V
Sbjct: 302 TPAYPQQNTSVNVSRSTLAILNEEIHRGHAICQEIEQKKAKWSELFEQTDFFQKYQHYAV 361
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPE 445
L AS + E LEW GL+ESK+R L+ LERN ++LAHV+P +
Sbjct: 362 LEASYTTEEKCLEWVGLVESKIRLLVSTLERNELVSLAHVHPHAFP-------------- 407
Query: 446 ITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMM 505
G + G ++MW IGL +LN+ D + F + A S +
Sbjct: 408 ---------GHRKANKKDGQSTMWLIGL-------VLNVK-DSERFNSL----ARSSDIY 446
Query: 506 KDGMKIEVRHVKKKQL-----------SEYLPAHMLKKDKKTKSGDQN--------TSAK 546
+GM + V ++++ L SE LP + K G + T +K
Sbjct: 447 DEGMSLSVACLRREDLIYEPQQRAPQPSETLPPCHVSPVSADKQGTKKRELLHRSETPSK 506
Query: 547 KRKSDQAL--DELGDKSRP 563
K K D++L D+L + + P
Sbjct: 507 KIKDDKSLPVDQLSNVTGP 525
>gi|170059284|ref|XP_001865296.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167878124|gb|EDS41507.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 328
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/333 (69%), Positives = 266/333 (79%), Gaps = 10/333 (3%)
Query: 98 VAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRA 157
+AEK+GG IYTFGSYRLGV+HK A+IDALCVAPR+++R DYF SF E LK EVT+ RA
Sbjct: 2 LAEKLGGMIYTFGSYRLGVNHKRANIDALCVAPRNIERQDYFGSFLELLKKQPEVTECRA 61
Query: 158 VEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTD 217
VEE VP +KMN DGI+ID+LFARLALKEIPD+ DL +DMLLKNLD K VRSLN CR TD
Sbjct: 62 VEEVLVPDVKMNLDGIKIDLLFARLALKEIPDNFDLCEDMLLKNLDPKLVRSLNRCRATD 121
Query: 218 EILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTL 277
EILRLVPNI+NFRLALR+ KLWAKKHGIYSN LGY GGVSWAMLVAR CQL PN A+T
Sbjct: 122 EILRLVPNIDNFRLALRSTKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQL-PNVVAATQ 180
Query: 278 VCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFN 337
V KFFLVFS+WKW PV LK+PD VNLGF VWDPRVNV R+HLMPIITPAYP
Sbjct: 181 VHKFFLVFSRWKWSHPVFLKRPDTVNLGFQVWDPRVNVQGRFHLMPIITPAYPH------ 234
Query: 338 VSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQL 397
STR +M EF +G I+++I GK WDKLFE P+FF KYR+ +VL+ +S + +D L
Sbjct: 235 ---STRKVMLNEFSRGMQITDEIMLGKAGWDKLFEAPSFFFKYRYIIVLLVTSNNTDDLL 291
Query: 398 EWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
EWC L+ESK+R+LI NLER HINLAHVNP+C+
Sbjct: 292 EWCELVESKIRYLIQNLERILHINLAHVNPKCF 324
>gi|341899656|gb|EGT55591.1| hypothetical protein CAEBREN_21062 [Caenorhabditis brenneri]
Length = 684
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/537 (45%), Positives = 340/537 (63%), Gaps = 33/537 (6%)
Query: 8 NSMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEEL 67
N+ S P QD P G++ ++++ P+ DL T +L E LK + E EE
Sbjct: 22 NNNNMSVPVQDSTP------LLGVSQPISVAHPDAKDLALTEQLIETLKEFKSYEPKEET 75
Query: 68 SSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALC 127
R+EVL LN LVKEW+K V+ K IP GGK++TFGSYRLGVH GADID L
Sbjct: 76 DKRLEVLRALNRLVKEWVKNVTAIK-IPSGDGANAGGKLFTFGSYRLGVHSSGADIDTLA 134
Query: 128 VAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI 187
V PRH+DR+D+F+SF E L VT+L AVEEAFVPV+K+ + G+E+D+LFARLAL+E+
Sbjct: 135 VVPRHIDRSDFFTSFKEMLNQDPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALREV 194
Query: 188 PDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYS 247
PD+ +L DD LL+NLD + +RSLNGCRV +++L+LVP + F ALR IK+WAK HGIYS
Sbjct: 195 PDNQELSDDQLLRNLDPESIRSLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYS 254
Query: 248 NVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP 307
N +G+ GG+SWA+L+AR CQLYPNA+ S LV + F +FS W WP PVLLK+ + P
Sbjct: 255 NSMGFFGGISWAILIARACQLYPNASPSKLVHRMFFIFSTWTWPHPVLLKELNQDRNDIP 314
Query: 308 -----VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYN 362
+WDPR DR+HLMPIITPA+P+QNST NV+ ST I+++E + I DI++
Sbjct: 315 TLCELIWDPRHKNTDRFHLMPIITPAFPEQNSTHNVTRSTHQIIKDEIWEALEICRDIHD 374
Query: 363 GKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL 422
G+ W LFE NFF++Y+H++ LI ++ + E++L + G +ES++R L+ +LERNP I L
Sbjct: 375 GRAKWSALFEEVNFFSRYKHFIALIMAAPNEEEELSYGGFLESRIRLLVQSLERNPDIIL 434
Query: 423 AHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVIL 482
AH +P + + A SPE + ++WFIGL+F L
Sbjct: 435 AHNDPNKHKPSKN--AKFDVSPE-----------------NKRITVWFIGLEFAEHAKNL 475
Query: 483 NLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR--HVKKKQLSEYLPAHMLKKDKKTK 537
+LT +IQ F V QA+ K + ++E+ +VK+ L + + A L + ++ K
Sbjct: 476 DLTNEIQRFKTNVELQASSVKGIGPTCQVEIDMFYVKRNNLIQVISAADLSRGRRWK 532
>gi|341899657|gb|EGT55592.1| hypothetical protein CAEBREN_22785 [Caenorhabditis brenneri]
Length = 630
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/527 (45%), Positives = 336/527 (63%), Gaps = 28/527 (5%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
Q P+ G++ ++++ P+ DL T +L E LK + E EE R+EVL LN LV
Sbjct: 6 QGSTPI-LGVSQPISVAYPDAKDLALTEQLIETLKEFKSYEPKEETDKRLEVLRALNRLV 64
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
KEW+K V+ K IP GGK++TFGSYRLGVH GADID L V PRH+DR+D+F+S
Sbjct: 65 KEWVKNVTAIK-IPSGDGANAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRSDFFTS 123
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F E L VT+L AVEEAFVPV+K+ + G+E+D+LFARLAL+E+PD+ +L DD LL+N
Sbjct: 124 FKEMLNQDPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALREVPDNQELSDDQLLRN 183
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
LD + +RSLNGCRV +++L+LVP + F ALR IK+WAK HGIYSN +G+ GG+SWA+L
Sbjct: 184 LDAESIRSLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAIL 243
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK-----KPDNVNLGFPVWDPRVNVA 316
+AR CQLYPNA+ S LV + F +FS W WP PVLLK + D L VWDP +
Sbjct: 244 IARACQLYPNASPSKLVHRMFFIFSTWTWPHPVLLKFAAKDRNDIPALCKLVWDPEKKSS 303
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
D++HLMPIITPA+P+QNST NV+ S+ I+++E + I E I +GK W LFE NF
Sbjct: 304 DKFHLMPIITPAFPEQNSTHNVTRSSSQIIKDEIWEALEICEQINDGKAKWKDLFEEVNF 363
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV 436
F++Y+H++ LI ++ + E++L + G +ES++R L+ +LERNP I LAH +P + +
Sbjct: 364 FSRYKHFIALIMAAPNEEEELSYGGFLESRIRLLVQSLERNPDIILAHNDPNKHKPSKN- 422
Query: 437 IANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVH 496
A SPE + ++WFIGL+F L+LT +IQ F
Sbjct: 423 -AKFDVSPE-----------------NKRITVWFIGLEFSEHATSLDLTNEIQRFKTNFE 464
Query: 497 WQATQSKMMKDGMKIEVR--HVKKKQLSEYLPAHMLKKDKKTKSGDQ 541
QA+ K + ++E+ HVK++ L + + A L + ++ K +
Sbjct: 465 LQASSVKGIGPTCQVEIDMFHVKQRNLIQVISAADLSRGRRWKKSSK 511
>gi|17565368|ref|NP_505683.1| Protein PAP-1 [Caenorhabditis elegans]
gi|3880758|emb|CAA16309.3| Protein PAP-1 [Caenorhabditis elegans]
Length = 655
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/515 (45%), Positives = 332/515 (64%), Gaps = 27/515 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G++ ++L+ P+ D+ +T L E LK + E EE RMEVL LN LVKEW+K V+
Sbjct: 13 GVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNVT 72
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
K IP GGK++TFGSYRLGVH GADID L V PRH+DR+D+F+SF E L
Sbjct: 73 AMK-IPNGEGVNAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRSDFFTSFKEMLNND 131
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
VT+L VEEAFVPV+K+ + G+E+D+LFARLALKE+PD +L DD LL+NLDQ+ VRS
Sbjct: 132 PNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESVRS 191
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNGCRV +++L+LVP + F + LR IKLWAK HGIYSN +G+ GG++WA+LVAR CQLY
Sbjct: 192 LNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLY 251
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP-----VWDPRVNVADRYHLMPI 324
PNA+ S LV + F +FS W WP PV+L + +N P VWDPR DR+H+MPI
Sbjct: 252 PNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPI 311
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL 384
ITPA+P+QNST NV+ ST T+++ E + I DI GK+ W LFE NFF++Y+H++
Sbjct: 312 ITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKHFI 371
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSP 444
LI ++ + E++L + G +ES++R L+ +LERN I +AH +P + + +
Sbjct: 372 ALIMAAPNEEEELNYGGFLESRIRLLVQSLERNQDIIIAHNDPNKHKPSP------NAKF 425
Query: 445 EITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKM 504
++ E K ++WFIGL+F L+LT +IQ F V QA+ K
Sbjct: 426 DVNPENKR-------------VTVWFIGLEFAEHAKTLDLTNEIQRFKTNVELQASNVKG 472
Query: 505 MKDG--MKIEVRHVKKKQLSEYLPAHMLKKDKKTK 537
+ ++I++ +VK+ L + + A L++ ++ K
Sbjct: 473 IGPNCQVQIDMFYVKRNSLIQVISAADLRRGRRWK 507
>gi|308478522|ref|XP_003101472.1| CRE-PAP-1 protein [Caenorhabditis remanei]
gi|308263118|gb|EFP07071.1| CRE-PAP-1 protein [Caenorhabditis remanei]
Length = 639
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/511 (46%), Positives = 328/511 (64%), Gaps = 28/511 (5%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
Q + P+ G++ ++L+ P+ D+ T +L E LK N E E RMEVL LN LV
Sbjct: 4 QDKTPL-LGVSQPISLAHPDAKDILLTEQLVETLKKCNSYEPKAETEKRMEVLRSLNRLV 62
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
KEW+K V+ K IP GGK++TFGSYRLGVH GADID L V PRH+DR D+F+S
Sbjct: 63 KEWVKNVTAIK-IPSGEGANAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRTDFFTS 121
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F E L VT+L AVEEAFVPV+K+ + G+E+D+LFARLALKE+PD +L DD LLKN
Sbjct: 122 FKEMLSQDPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDSLLKN 181
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
LDQ+ VRSLNGCRV +++L+LVP N+ +ALR IKLWAK HGIYSN +G+ GG+SWA+L
Sbjct: 182 LDQESVRSLNGCRVAEQLLKLVPRQNNYCVALRAIKLWAKNHGIYSNSMGFFGGISWAIL 241
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLL-----KKPDNVNLGFPVWDPRVNVA 316
+AR CQLYPNA+ S LV + F +F+ W WP PVLL ++ D L VWDPR
Sbjct: 242 IARACQLYPNASPSRLVHRMFFIFATWTWPHPVLLNELNSERTDVGALIDLVWDPRRKST 301
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DR+HLMPIITPA+PQQNST NV+ ST +++ E +G I DI GK WD LF+ NF
Sbjct: 302 DRFHLMPIITPAFPQQNSTHNVTRSTMQVIRTEICEGLEICRDISEGKCGWDALFKEVNF 361
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV 436
F++Y+HY+ L+ ++ + E++L + G +ES++R L+ +LERN I +AH +P + +
Sbjct: 362 FSRYKHYIALLMAAPNEEEELNYGGFLESRIRLLVQSLERNQDIVIAHNDPNKHKPSPN- 420
Query: 437 IANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVH 496
A SPE + ++WFIGL+F+ L+LT +I F V
Sbjct: 421 -AKFDVSPE-----------------NKRITLWFIGLEFVEHTKSLDLTSEIHRFKTNVE 462
Query: 497 WQATQSKMMKDGMKIEVR--HVKKKQLSEYL 525
QA+ K + +E+ +VK+ +L + +
Sbjct: 463 LQASGVKGIGPNCTVEIDMFYVKRNKLFQII 493
>gi|196011858|ref|XP_002115792.1| hypothetical protein TRIADDRAFT_30173 [Trichoplax adhaerens]
gi|190581568|gb|EDV21644.1| hypothetical protein TRIADDRAFT_30173, partial [Trichoplax
adhaerens]
Length = 405
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/387 (59%), Positives = 292/387 (75%), Gaps = 1/387 (0%)
Query: 44 DLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVG 103
D++ T L + + P++V E+++E+ RM VL+K+N LVK+WI +VS++KN+P ++A VG
Sbjct: 1 DIKLTDALIQAIIPFDVIESNDEMQHRMNVLAKVNQLVKQWIVDVSLSKNMPLSIANSVG 60
Query: 104 GKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFV 163
G ++TFGSYRLGVH KGADIDALCVAPRHVDR +F+SF + LK+ EVT + VE+AFV
Sbjct: 61 GNVFTFGSYRLGVHTKGADIDALCVAPRHVDRTSFFASFVDLLKSQTEVTQITVVEDAFV 120
Query: 164 PVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLV 223
PVIKM FDGIE+DMLFARL L+ IP+++DL D LL+NLD KCVRSLNGCRVTD IL LV
Sbjct: 121 PVIKMVFDGIEMDMLFARLGLQNIPENLDLLDLELLRNLDMKCVRSLNGCRVTDAILSLV 180
Query: 224 PNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFL 283
PN ++FR ALR IKLWAK+ GIYSN LGYLGGVSWAMLVAR CQLYPNA A+T+V KFFL
Sbjct: 181 PNADSFRTALRFIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQLYPNAVAATIVQKFFL 240
Query: 284 VFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTR 343
VF+QW W QPVLL + +L W P N +DR LM IITP YP QNSTFNVS ST+
Sbjct: 241 VFNQWNWQQPVLLTRMVESDLNLNGWTPS-NFSDRSQLMQIITPVYPHQNSTFNVSKSTK 299
Query: 344 TIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLI 403
TI+ EE ++G I +I+ W FE +FF +Y+HY+VL A + S ++ EW GL+
Sbjct: 300 TILLEEIERGLKICNEIFLRNAKWTDAFEPADFFGRYKHYIVLTAKATSEDNYKEWIGLV 359
Query: 404 ESKVRHLIGNLERNPHINLAHVNPECY 430
ESK+R L+ LERN + ++ H+NP+ Y
Sbjct: 360 ESKLRKLVLTLERNEYFDIVHINPKSY 386
>gi|17533995|ref|NP_496524.1| Protein F43G6.5 [Caenorhabditis elegans]
gi|5832750|emb|CAA90398.2| Protein F43G6.5 [Caenorhabditis elegans]
Length = 554
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/530 (46%), Positives = 334/530 (63%), Gaps = 37/530 (6%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T+G++ ++ + PN DL+ T L + L YN E EE S R++VL KLN VK+WI++
Sbjct: 18 TFGVSQPISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLNGCVKQWIQK 77
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
++ A+ P GG++ FGSYRLGVH GADID L +APRH RAD+FSSF + L
Sbjct: 78 ITEAR-YPKDQLFNAGGQLMAFGSYRLGVHSSGADIDTLVLAPRHATRADFFSSFKQMLA 136
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
EVT+L AVE AFVP++ M + GIEID LFARLALKE+P+D+D+ DD LLKNLDQ+ V
Sbjct: 137 KDPEVTNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQESV 196
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRV + +L+LVPN ENF + LR IKLWAK HGIYSN +G+ GG++WA+LVAR CQ
Sbjct: 197 RSLNGCRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQ 256
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLL-----KKPDNVNLGFPVWDPRVNVADRYHLM 322
LYPNA+ S L+ K F +FS WKWP PVLL + D L VWDPR N +DRYHLM
Sbjct: 257 LYPNASPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLM 316
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRH 382
PI+TPA+PQQNST NVS S+ ++QEE K ++I NG W L E NFF++Y+H
Sbjct: 317 PIVTPAFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLLEEINFFSRYKH 376
Query: 383 YLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSG 442
++ L ++ + +D+L + G ES++R L+ LE+N I LAH+NP+ + +
Sbjct: 377 FISLSMTAETEKDELAFGGFFESRIRQLVLILEKNQGIKLAHINPKKF--------KAAK 428
Query: 443 SPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQS 502
P+ S+WFIGL F L+LT DIQ F + +QA
Sbjct: 429 DPK--------------------KSVWFIGLQFDENVKNLDLTKDIQQFKRNIDYQAKSV 468
Query: 503 KMMKDGMKIEV--RHVKKKQLSEYLPAHMLKKDKKTKSGD-QNTSAKKRK 549
K ++ +E +VK+ L++ + LK+ K K + ++ +KKRK
Sbjct: 469 KDIEANCAVETDFSYVKRSDLAQTISVKDLKQGKMYKKPESKDPVSKKRK 518
>gi|384487946|gb|EIE80126.1| hypothetical protein RO3G_04831 [Rhizopus delemar RA 99-880]
Length = 598
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/594 (42%), Positives = 357/594 (60%), Gaps = 44/594 (7%)
Query: 24 QAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKE 83
+ P+ G+T ++ P + +++ T +L E LK Y + E+++E R+ VL KL+ LVKE
Sbjct: 4 EKPIQLGVTPPISTEPSTEREIKLTNDLLETLKSYGLFESEQEAQKRVVVLGKLDKLVKE 63
Query: 84 WIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFF 143
++ +VS K P ++A + GGKI+T+GSYRLGVH GADID LCV P+HV+R +F+ +
Sbjct: 64 FVYKVSKMKGFPDSLAREAGGKIFTYGSYRLGVHGAGADIDTLCVFPKHVEREHFFTIMY 123
Query: 144 EKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLD 203
+ LK EVT++ AV +A+VPVIKM+F GI ID + ARLA+ +PDD++L D+ +LKNLD
Sbjct: 124 DMLKERPEVTEISAVPDAYVPVIKMHFSGIPIDFICARLAVARVPDDLELADNNILKNLD 183
Query: 204 QKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVA 263
++CVRSLNG RVTD+ILRLVPN+ FR+ALRTIKLWAK IYSNV+G+LGGV+WAML+A
Sbjct: 184 ERCVRSLNGSRVTDDILRLVPNVATFRIALRTIKLWAKCKAIYSNVMGFLGGVAWAMLIA 243
Query: 264 RICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMP 323
RICQLYPNA A+++V +FFL+ QWKWPQPVLL+ ++ L VW+P++ ADR H MP
Sbjct: 244 RICQLYPNACAASIVNRFFLIMYQWKWPQPVLLRPLEDGPLQVRVWNPKLYPADRSHRMP 303
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHY 383
IITPAYP +T NV+ STR IM +EFK G ++ +I G W LF +FF +++HY
Sbjct: 304 IITPAYPSMCATHNVTESTRKIMIQEFKNGIDVASNIILGSGQWSDLFVKSDFFQQFKHY 363
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGS 443
L + +SS S+E QL W GL+E+K+R L+ LE I LAH + + D N
Sbjct: 364 LQITSSSYSSETQLMWSGLVEAKLRQLVLKLETVDMIELAHPYVKGF-DKAHYCLNDQEV 422
Query: 444 PEITAEG--------KEEGGENT----SPPVSGV-------------ASMWFIGLDFIAA 478
++ G EEGG S +G+ + ++IGL+ I
Sbjct: 423 EDVMKGGLLNERSISVEEGGLEVDHIESLKANGIIKEEEKENIKKVYTTTFYIGLEIIKP 482
Query: 479 NVI-----------LNLTYDIQHFTNAVH-WQATQSKMMKDGMKIEVRH----VKKKQLS 522
+ LNL IQ F V W K M+ + R +KK L
Sbjct: 483 KPVGTENEVGGGRKLNLIGPIQDFQKLVKTWDKYDEKEMRISIATIKRCLENLIKKYLLI 542
Query: 523 EY--LPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLSD 574
++ LP+ + K T + S K++ +Q DE + + + + +S +D
Sbjct: 543 KWSKLPSELTSSKKTTTAVATTASQKRKNEEQEQDERSNTKKIKTNDESEHTTD 596
>gi|66806183|ref|XP_636814.1| poly polymerase [Dictyostelium discoideum AX4]
gi|74852689|sp|Q54J73.1|PAP_DICDI RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|60465216|gb|EAL63311.1| poly polymerase [Dictyostelium discoideum AX4]
Length = 809
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/551 (43%), Positives = 342/551 (62%), Gaps = 40/551 (7%)
Query: 26 PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
P G+T ++ +PP+ +D + + EL L +N+ E+ EE R E+L KLN +V+EW
Sbjct: 50 PTILGVTEPISTAPPSSIDFKLSTELENTLISFNLFESPEESRKREEILGKLNQIVREWA 109
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
K+VS+ K P A +V KI+TFGSYRLGVH G+DID LCV P+H+ R+D+F +
Sbjct: 110 KQVSLKKGYPEQTASEVVAKIFTFGSYRLGVHGPGSDIDTLCVGPKHIMRSDFFDDLSDI 169
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDM-DLRDDMLLKNLDQ 204
LK E+T+ V++AFVPVI M F GI ID+++A+LAL IP+++ DL D+ LKN+D+
Sbjct: 170 LKVHPEITEFTTVKDAFVPVITMVFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNIDE 229
Query: 205 KCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVAR 264
K + SLNGCRVTD+IL+LVPNI NFR+ALR IKLWA + GIYSN+LG+LGGVSWA+L AR
Sbjct: 230 KSILSLNGCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTAR 289
Query: 265 ICQLYPNAAASTLVCKFFLVFSQWKWPQPVLL-KKPDNVNLGFPVWDPRVNVADRYHLMP 323
ICQLYPN+A ST++ +FF V+ WKWP P+LL + LG VW+P+ D+ HLMP
Sbjct: 290 ICQLYPNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPK---RDKAHLMP 346
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHY 383
IITPAYP NST+NVS ST +M+ EF +G I+ I G+ W L E +FFT+Y Y
Sbjct: 347 IITPAYPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIETGECTWKNLLEKCDFFTRYSFY 406
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGS 443
+ + S++ ED +W G IESK+R LI NLE P + A P+ +T+ + + +
Sbjct: 407 IEIDCYSMNEEDSRKWEGWIESKLRFLISNLESTPKMKFAVPYPKGFTNN----LHKANN 462
Query: 444 PEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANV-----ILNLTYDIQHFTNAVH-W 497
P+ + + +F+GL F +N ++LT + FT + W
Sbjct: 463 PD------------------QICTSFFMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDW 504
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYL----PAHMLKKDKKTKS-GDQNTSAKKRKSDQ 552
TQ D M I+V+++KKKQL ++ P +K KK S G+ + + KK KS+
Sbjct: 505 LRTQPN--PDTMDIKVQYIKKKQLPAFVKDEGPEEPVKTTKKRSSTGEPSATRKKLKSEN 562
Query: 553 ALDELGDKSRP 563
+ ++L P
Sbjct: 563 SDNKLNSPKSP 573
>gi|345490104|ref|XP_003426299.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Nasonia vitripennis]
Length = 383
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/402 (57%), Positives = 281/402 (69%), Gaps = 29/402 (7%)
Query: 144 EKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLD 203
E LK+ EV DLRA+EEAFV VIKMNFDGIEIDMLFA L ++PD MD DDMLLK LD
Sbjct: 5 ELLKSQKEVKDLRAIEEAFVXVIKMNFDGIEIDMLFAHLQGTKLPDPMDFTDDMLLKYLD 64
Query: 204 QKCVRSLNGCRVTDEILRLVPNIENFRLA-LRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
QKCVRSLNGCRVT EIL+ V N+ENFRL L+ IKL AK +GIYSNVLGYLG VSWA+LV
Sbjct: 65 QKCVRSLNGCRVTKEILQSVSNLENFRLTTLKAIKLRAKNNGIYSNVLGYLGVVSWAILV 124
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR--YH 320
AR CQLYPNAA +TL+ KFFL+FS W+WP+PVLLK VNLG VWDPRVN +DR YH
Sbjct: 125 ARTCQLYPNAAPATLIEKFFLIFSIWEWPRPVLLKSVKKVNLGLQVWDPRVNASDRPPYH 184
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKY 380
LMPIITPAYPQQNSTFNV+ISTRTIM+E K I++DI GK WDKLFE NFF +
Sbjct: 185 LMPIITPAYPQQNSTFNVTISTRTIMEEAIKTVLAITKDIAMGKASWDKLFEPSNFFDEX 244
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANG 440
+H+++L ASS++ + +EW G IESK+RHLIG+ +RNP+I AH+NP+ +
Sbjct: 245 KHFVILSASSLTNKMSIEWSGFIESKIRHLIGSFDRNPNITFAHINPKSF---------- 294
Query: 441 SGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVI-LNLTYDIQHFTNAVHWQA 499
P + E E G MW IGL F A + ++LT DI+ F Q
Sbjct: 295 ---PPLKPEEDEHG------------CMWLIGLTFRKAEKLSIDLTSDIKSFIKTTEGQV 339
Query: 500 TQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQ 541
+S + KDGM E ++V++K LS Y+ A+ +K+ +KT S Q
Sbjct: 340 KKSNLFKDGMSQEAKYVRRKNLSNYIAANQIKRGRKTSSSTQ 381
>gi|268558234|ref|XP_002637107.1| C. briggsae CBR-PAP-1 protein [Caenorhabditis briggsae]
Length = 653
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/513 (46%), Positives = 320/513 (62%), Gaps = 28/513 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G++ ++ P+Q D+ T +L LK +N E EE RMEVL LN LVKEW+K+V+
Sbjct: 13 GVSQPISTLRPDQKDIVMTDQLIATLKKFNSYEPKEETEKRMEVLRSLNRLVKEWVKKVT 72
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
K IP GGK++TFGSYRLGVH GADID L V PRH+DR D+F+SF E L+
Sbjct: 73 AIK-IPSGEGANAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRTDFFTSFKEMLRQD 131
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
VT+L VEEAFVPV+K+ + G+E+D+LFARLALKE+PD DL DD LL+NLDQ+ VRS
Sbjct: 132 PNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQDLFDDQLLRNLDQESVRS 191
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNGCRV + +L+LVP + F +ALR IKLWAK HGIYSN +G+ GG+SWA+LVAR CQLY
Sbjct: 192 LNGCRVAELLLKLVPRQKEFCIALRAIKLWAKNHGIYSNSMGFFGGISWAILVARACQLY 251
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP-----VWDPRVNVADRYHLMPI 324
PNA+AS +V + F +FS W WP PVLL D P +WDPR +DR+HLMPI
Sbjct: 252 PNASASRIVHRMFFIFSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPRKKNSDRFHLMPI 311
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL 384
ITPA+P+QNST NV+ ST I++ E +G I +DI GK W+ LF+ FF++Y+HY+
Sbjct: 312 ITPAFPEQNSTHNVTRSTCHIIRNEICEGLEICKDITEGKATWEDLFKEVKFFSRYKHYI 371
Query: 385 VLIASS-VSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGS 443
+ + +E +ES++R L+ +LERN I +AH DT S
Sbjct: 372 GISDHGYIHRRRGIELWRFLESRIRLLVQSLERNQDILIAH------NDTN----KHRPS 421
Query: 444 PEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSK 503
P + + E T +WFIGL+F L+LT +IQ F V QA+ K
Sbjct: 422 PNAKFDVRPENTRIT---------IWFIGLEFAEHATNLDLTSEIQRFRTNVELQASGVK 472
Query: 504 MMKDGMKIEVR--HVKKKQLSEYLPAHMLKKDK 534
+ ++E+ ++K+ +L + A LKK +
Sbjct: 473 GIGPNSQVEIDMFYMKRTRLFSIIGAAALKKGR 505
>gi|9453844|dbj|BAB03278.1| poly A polymerase [Drosophila melanogaster]
Length = 459
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/402 (55%), Positives = 284/402 (70%), Gaps = 10/402 (2%)
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
LD + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKHGIYSN LGY GGV+WAML
Sbjct: 1 LDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAML 60
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR CQLYPNAAA+TLV KFFLVFS+WKWP PVLLK PDNVNL F VWDPRVN +DRYH
Sbjct: 61 VARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHP 120
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYPQQNSTFNVS ST+ ++ EF +G I+++I G+ W++LFE P+FF +YR
Sbjct: 121 MPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYR 180
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGS 441
H++VL+ +S +A+D LEWCGL+ESKVR LIGNLERNPHI LAHVNP+C+ G AN S
Sbjct: 181 HFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANNS 240
Query: 442 GSPEITAEG-KEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQA 499
+ + K+ G ++ + SMWFIGL+F + N+ ++LT IQ+FT V
Sbjct: 241 QNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLNVDLTESIQNFTEHVMMHG 300
Query: 500 TQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQN-----TSAKKRKSD--- 551
KM+K+GM I+ RHVK+KQLS YL + LK+++K+ N + +KR S
Sbjct: 301 VNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKSMESHNNFNNTLLANRKRLSTELA 360
Query: 552 QALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTED 593
Q+ D L +P + K+ +S++ + +S + D
Sbjct: 361 QSQDPLPPGQQPSSGNRGRDSGAKIQRLSDSLTEENSNASSD 402
>gi|449549561|gb|EMD40526.1| hypothetical protein CERSUDRAFT_80191 [Ceriporiopsis subvermispora
B]
Length = 629
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/555 (44%), Positives = 338/555 (60%), Gaps = 33/555 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + N + + T L + L+ ET+EE +R VL ++ LVK +++ VS
Sbjct: 9 GVTPPISTNESNAREKEVTVTLMDELRRQGTFETEEEAKTREIVLGRVAALVKRFVRHVS 68
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+ + + A GGKI+TFGSYRLGVH G+DID LCV P+HV R D+F F E LK
Sbjct: 69 LKRGLSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSREDFFEVFEEMLKET 128
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+ VT+ V +A+VP++K GI +D+L ARLAL IPDD+ L+DD LL+NLD++CVRS
Sbjct: 129 EGVTEASGVPDAYVPILKAKISGIPLDLLMARLALSAIPDDLSLQDDNLLRNLDERCVRS 188
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNG RVTDEILRLVPN+ FR +LR IKLWA++ IYSNV G+LGGV+WAMLVARICQLY
Sbjct: 189 LNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLY 248
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNA A +V +FF++ QW WPQPVLLK+ ++ L VW+P++ ADR H MPIITPAY
Sbjct: 249 PNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPKLYPADRAHRMPIITPAY 308
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P +T NVS ST+ IM EEFK+G I + + GK W +LF +FF KYR+YL +IAS
Sbjct: 309 PSMCATHNVSASTQMIMTEEFKKGSEIVDKVIVGKANWSELFAKHDFFHKYRYYLQVIAS 368
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYTD-TTGVIANGS 441
+ S E Q +W G +ES++R L+ LE + LAH + C +D +A G
Sbjct: 369 TGSQELQTKWAGTVESRIRQLVMKLEYVDSLTLAHPFIKGFEQVSCCLSDEEVRAVAQGE 428
Query: 442 GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF------IAANVILNLTYDIQHFTNAV 495
S E+ A+ K+E E + ++ ++IGL L+++Y FT V
Sbjct: 429 IS-EVIAKRKKEDIEGKDGASTVYSTTFYIGLAIEPKQPGAVGPRKLDISYPTTEFTKLV 487
Query: 496 H-WQATQSKMMKDGMKIEVRHVKKKQLSEYL-------PAHMLKKDKKTKSGDQ--NTSA 545
W+ K M I VRH+K L +Y+ P K+ K +K+ D+ NTS
Sbjct: 488 KMWE----KYDDSTMGIVVRHIKSTALPDYVFEPGERQPRSAQKRPKTSKNADKSNNTSP 543
Query: 546 ----KKRKSDQALDE 556
KKR++ ++ E
Sbjct: 544 DMPNKKRRASNSVSE 558
>gi|403173934|ref|XP_003332965.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170759|gb|EFP88546.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 671
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 248/555 (44%), Positives = 328/555 (59%), Gaps = 51/555 (9%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T A++L P + + Q T L E LK N+ E+ EE +R VL +L+ LVK+++
Sbjct: 15 TYGVTGAISLQPATKPEQQLTVSLMEELKRRNIFESPEEARAREIVLGRLDVLVKQFVIN 74
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VSI+ + VA GGKI+TFGSYRLGVH GADID LCV PRH+ R +F L
Sbjct: 75 VSISLGMSEAVARDSGGKIFTFGSYRLGVHGPGADIDTLCVVPRHITREHFFEVLPAMLN 134
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
EVT+L V EAFVP+IK+ F IE+D+LFARLAL IPD ++L DD LLKNLD +CV
Sbjct: 135 DRPEVTELATVPEAFVPIIKLKFSSIEVDLLFARLALPSIPDSLELIDDALLKNLDDRCV 194
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSL G RVTDEILRLVP++ FR +LR IKLWAK +YSNV+G+ GGV+WAM VAR+CQ
Sbjct: 195 RSLGGSRVTDEILRLVPDVTVFRDSLRAIKLWAKSRAVYSNVMGFCGGVAWAMCVARVCQ 254
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP-----VWDPRVNVADRYHLM 322
LYPN A T+V +FF V SQW WP PVLLK + G P +W+P++ DR H M
Sbjct: 255 LYPNKPAGTIVNRFFAVLSQWNWPSPVLLKP---IGPGPPGDQRRIWNPKIYPQDRGHRM 311
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRH 382
PIITPAYP ST N++ ST IM EFK+G ++++I G W LF+ +FFT+YR+
Sbjct: 312 PIITPAYPCMCSTHNITKSTAQIMMTEFKRGLAVTDEIATGTKPWAALFDKHDFFTRYRY 371
Query: 383 YLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH-----VNPECY---TDTT 434
YL + ASS +AE QL+W G +E+++R L+ +E ++LAH E Y +D
Sbjct: 372 YLQITASSPNAEIQLKWAGTVEARLRQLVMKVEEVETVDLAHPFIKGFERESYYLTSDEV 431
Query: 435 GVIANGSGSPEITA------EGKEEGGENTSPPVSGVASMWFIGLDFIAANV------IL 482
I G P++ EGKE G + S +FIGL L
Sbjct: 432 RAIQVGDVPPDVKGRTLADIEGKEGSG-------AVYTSSFFIGLLVQPKPAGHTGPRKL 484
Query: 483 NLTYDIQHFTNAV-HWQATQSKMMKDGMKIEVRHVKKKQLSEY-----------LPAHML 530
+++Y + FT V W+ +D M I VR++K QL +Y +P+
Sbjct: 485 DISYPVGEFTRMVKQWEG----YAEDSMGIIVRYIKGAQLPDYVFDGEQRPSASVPSSKA 540
Query: 531 KKDKKTKSGDQNTSA 545
K KT Q TS+
Sbjct: 541 FKRTKTGKAKQATSS 555
>gi|403415037|emb|CCM01737.1| predicted protein [Fibroporia radiculosa]
Length = 626
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/557 (43%), Positives = 336/557 (60%), Gaps = 37/557 (6%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ S N + + T L E L+ ET+EE +R VL +L +VK++++ VS
Sbjct: 9 GVTPPISTSESNDREKEVTTTLMEELRRQGTFETEEEAKTREIVLGRLAAVVKKFVRRVS 68
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+A + A GGKI+TFGSYRLGVH G+DID LCV P+HV R D+F E LK
Sbjct: 69 LANGMSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTREDFFDVLEEMLKET 128
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+ VT++ V EA+VP+IK +GI ID+ ARLAL IPDD+ L+DD LL+NLD++CVRS
Sbjct: 129 EGVTEVSGVPEAYVPIIKTKINGIPIDLTMARLALSSIPDDLSLQDDNLLRNLDERCVRS 188
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNG RVTDEILRLVPN+ FR +LR IKLWA++ IYSNV G+LGGV+WAMLVARICQLY
Sbjct: 189 LNGSRVTDEILRLVPNVTVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLY 248
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNA A +V +FF++ QW WPQPVLLK+ + L VW+P++ ADR H MPIITPAY
Sbjct: 249 PNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPAY 308
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P +T NV+ ST+ IM EEFK+G I + + G W +LF +FF K+R+YL +IAS
Sbjct: 309 PSMCATHNVTASTQMIMTEEFKKGSEIVDKVIVGTAEWSELFAKHDFFHKHRYYLQVIAS 368
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH--------VNPECYTDTTGVIANGS 441
+ +++ Q++W G +ES++R L+ LE + LAH V+ ++ +A G
Sbjct: 369 TGNSDLQIKWSGTVESRIRQLVMKLEYVESLILAHPFIKGFEQVSHCISSEEVRAVAQGE 428
Query: 442 GSPEITAEGKE--EGGENTSPPVSGVASMWFIGLDF------IAANVILNLTYDIQHFTN 493
S ++ KE EG E S S + ++IGL + L+++Y FT
Sbjct: 429 VSEAVSKRRKEDIEGKEGASTVYS---TTFYIGLLIEPKLPGSSGPRKLDISYPTTEFTK 485
Query: 494 AVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL-------PAHMLKKDKKTKSGDQNTSA 545
V W+ K + M I VRH+K L +Y+ P K+ K K D++
Sbjct: 486 LVKMWE----KYDEAKMGIIVRHIKSTALPDYVYDEGERQPRSAQKRVKSGKGSDKSNGT 541
Query: 546 ------KKRKSDQALDE 556
KKR++ +L E
Sbjct: 542 SPDMPNKKRRASNSLSE 558
>gi|17536297|ref|NP_496067.1| Protein T15H9.6 [Caenorhabditis elegans]
gi|3879808|emb|CAA87419.1| Protein T15H9.6 [Caenorhabditis elegans]
Length = 554
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/495 (44%), Positives = 317/495 (64%), Gaps = 35/495 (7%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
S P+ +G++ ++ + P D+ T L L+ + E+ +E R++VL L+ LVK
Sbjct: 9 SSTPI-FGVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLVK 67
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
+W+++ +I++ IP GGK+ FGSYRLGVH GADID++ VAPRH+ R+D+F+SF
Sbjct: 68 DWVQKTTISR-IPKDQMFNAGGKLIPFGSYRLGVHSSGADIDSIVVAPRHITRSDFFNSF 126
Query: 143 FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNL 202
+ L EVT+L AVE+AFVP++ + + G++ID+LFARLALK +P+D+++ DD LLKNL
Sbjct: 127 KDILAKNPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNL 186
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D++ VRSLNGCRV +++L+LVP+ +NF + LR IKLWAK HGIYSN +G+ GG++WA+LV
Sbjct: 187 DEESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILV 246
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLL-----KKPDNVNLGFPVWDPRVNVAD 317
ARICQLYPNAA S L+ K F +FS W WP PVLL + D L VWDPR N AD
Sbjct: 247 ARICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHAD 306
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPA+PQQNST NVS S+ ++Q+E K+ I + I+ G W L E NFF
Sbjct: 307 RYHLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLLEEINFF 366
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
+KY H++ L + S +++L + G ES++R L+ LE+N I +A +NP + D
Sbjct: 367 SKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQILEKNQVIQVAQINPRKFKDVK--- 423
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHW 497
P+ S+WFIGL+F+A ++LT DIQ F +
Sbjct: 424 -----DPK--------------------KSIWFIGLEFVANVKNVDLTSDIQQFKMNIDR 458
Query: 498 QATQSKMMKDGMKIE 512
Q+ K + G ++E
Sbjct: 459 QSMSVKEIAAGCQVE 473
>gi|409050023|gb|EKM59500.1| hypothetical protein PHACADRAFT_250043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 556
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/555 (43%), Positives = 334/555 (60%), Gaps = 37/555 (6%)
Query: 25 APVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEW 84
AP G+T ++++ N+ + T L E L+ E++EE +R VL +L +L+K++
Sbjct: 6 APTYLGVTPPISVNESNEREKLVTVSLMEELRRQGTFESEEESKTREIVLGRLASLIKKF 65
Query: 85 IKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFE 144
+ ++S+ + A+ GGKI+TFGSYRLGVH G DID LCV P+HV R D+F +
Sbjct: 66 VHKISLQHGLSEAAADAAGGKIFTFGSYRLGVHGPGTDIDTLCVVPKHVSREDFFEALEP 125
Query: 145 KLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQ 204
L+ + VT++ V EA+VP++ GI ID+ ARLAL IPDD+ L+DD LL+NLD+
Sbjct: 126 MLRETEGVTEVTGVPEAYVPIVTTKISGIPIDLTMARLALSSIPDDLTLQDDNLLRNLDE 185
Query: 205 KCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVAR 264
+C+RSLNG RVTDEILRLVPN+E FR ALR IKLWA+K IYSNV G+LGGV+WAMLVAR
Sbjct: 186 RCIRSLNGSRVTDEILRLVPNVEVFRDALRCIKLWAQKKAIYSNVNGFLGGVAWAMLVAR 245
Query: 265 ICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPI 324
ICQLYP+A A +V +FF++ QW WPQPVLLK+ ++ L VW+PR+ ADR H MPI
Sbjct: 246 ICQLYPSAVAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPRLYPADRSHRMPI 305
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL 384
ITPAYP +T NVS ST+ IM EEFK+G I E + G T W +LF +FF KYR+YL
Sbjct: 306 ITPAYPSMCATHNVSQSTQMIMTEEFKKGSEIVEKVIMGTTQWSELFVKHDFFHKYRYYL 365
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI------- 437
+IAS+ + ++W G +ES++R L+ LE + LAH + + T +
Sbjct: 366 QVIASTGDPDLHIKWAGTVESRIRQLVMKLEYVDSLTLAHPFVKGFEQVTHCLTDDEVRD 425
Query: 438 -ANGSGSPEITAEGKE--EGGENTSPPVSGVASMWFIGLDF--IAANVI----LNLTYDI 488
A G S I KE EG E S S + ++IGL A + L+++Y
Sbjct: 426 AAQGEISDAIAKRKKEDIEGKEGASVVYS---TTFYIGLAIEPKQAGAVGPRRLDISYPT 482
Query: 489 QHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL-------PAHMLKKDKKTKSGD 540
FT V W+ K + M I VRH+K L +++ P LK+ K K
Sbjct: 483 TEFTKQVKMWE----KYDESAMGIVVRHIKSTALPDHVFDEGERQPRSALKRPKTAKGSG 538
Query: 541 Q--NTSA----KKRK 549
+ NTS KKR+
Sbjct: 539 KSSNTSPDVPHKKRR 553
>gi|164661493|ref|XP_001731869.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
gi|159105770|gb|EDP44655.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
Length = 527
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/431 (51%), Positives = 294/431 (68%), Gaps = 8/431 (1%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++++ P + DL+ T L L+ NV E+ EE R VL +++ LVKE++
Sbjct: 8 WGVTPPISMNGPTEKDLEVTNALEAELRANNVFESPEEAKLREVVLGRVDALVKEFVYRA 67
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
SI + + A GGKI+TFGSYRLGVH G+DID LCVAP+HV R D+F F L+
Sbjct: 68 SIKHGLSESAARASGGKIFTFGSYRLGVHGPGSDIDTLCVAPKHVQREDFFEIFEALLQA 127
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D+VT++ +V EA+VP+IK F GI ID LF+R+AL I D ++LRDD LLKNLD++ VR
Sbjct: 128 RDDVTEVTSVPEAYVPLIKTKFMGISIDFLFSRIALPRIDDSLELRDDNLLKNLDERDVR 187
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SL G RVTDEIL LVPN+ FRLALR IKLWA + IYSNVLG+LGGV+WAMLVARICQL
Sbjct: 188 SLGGSRVTDEILHLVPNVYVFRLALRCIKLWASRRAIYSNVLGFLGGVAWAMLVARICQL 247
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPN A +V +FF++ QWKWPQPVLLK+ ++ L VW+PR+ DR H MPIITPA
Sbjct: 248 YPNEVAGAIVSRFFIILLQWKWPQPVLLKQIEDGPLPIRVWNPRLYPTDRLHRMPIITPA 307
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T NV+ ST+ +M EEF++G + + I+ GKT W++LFE +FF KY++YL +IA
Sbjct: 308 YPSMCATHNVTQSTQMVMTEEFRRGSEVVDRIFRGKTSWNELFEKNDFFHKYKYYLQVIA 367
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH-----VNPE--CYTD-TTGVIANG 440
SS SA+ QL+W G +ES++R LI LE P + AH N E CYTD +A G
Sbjct: 368 SSGSADLQLKWQGTVESRLRQLIMKLELVPALLCAHPFVKGFNHECVCYTDEEVRQVATG 427
Query: 441 SGSPEITAEGK 451
++ + K
Sbjct: 428 DVPADVASRAK 438
>gi|395329949|gb|EJF62334.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 628
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 247/591 (41%), Positives = 342/591 (57%), Gaps = 31/591 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T + S N + + TR L E LK E+++E +R VL ++ LVK+++ V+
Sbjct: 14 GVTPPIATSESNPREKEVTRTLLEELKRQGTFESEDESKTREIVLGRIAALVKKFVHTVA 73
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+ + + A GGKI+TFGSYRLGVH G+DID LCV P+HV R D+F F LK
Sbjct: 74 LREGLSDAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSREDFFDVFEHMLKDA 133
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+ V ++ V +A+VP+IK+ GI ID++ ARLAL IPDD+ L+DD LL+NLD +CVRS
Sbjct: 134 EGVAEVSGVPDAYVPIIKIKMSGIPIDLVMARLALSTIPDDLSLQDDNLLRNLDDRCVRS 193
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNG RVTDEILRLVPN+ FR +LR IKLWA++ IYSNV G+LGGV+WAMLVARICQLY
Sbjct: 194 LNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLY 253
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNA A +V +FF++ QW WPQPVLLK+ ++ L VW+P+ ADR H MPIITPAY
Sbjct: 254 PNAVAGAIVSRFFIIMYQWAWPQPVLLKQIEDGPLPVRVWNPKSYPADRAHRMPIITPAY 313
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P +T NV+ ST+ IM EEFK+ I + + K W LF +FF KYR+YL +IAS
Sbjct: 314 PSMCATHNVTQSTQMIMTEEFKKASEIVDKVIINKASWSDLFARHDFFHKYRYYLQVIAS 373
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI--------ANGS 441
+ S E Q++W G +ES+VR L+ LE + LAH + + + I A G
Sbjct: 374 TGSPELQVKWSGTVESRVRQLVMKLEYVESLALAHPFIKGFEQVSYCINDEEVRSVAQGE 433
Query: 442 GSPEITAEGKE--EGGENTSPPVSGVASMWFIGLDF------IAANVILNLTYDIQHFTN 493
S + KE EG E S S + ++IGL L+++Y FT
Sbjct: 434 VSEAVARRKKEDIEGIEGASAVYS---TTFYIGLAVEPKQPGAVGPRRLDISYPTTEFTK 490
Query: 494 AVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL-------PAHMLKKDKKTKSGDQNTSA 545
V W+ K + M I VRH+K L EY+ P K+ KK + + ++
Sbjct: 491 LVKMWE----KFDEQKMGIVVRHIKSSALPEYVFDDGERQPRLAQKRPKKETTDRSSNTS 546
Query: 546 KKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSL 596
+ + L + S L ++ +S+ + + ++G SS E N L
Sbjct: 547 PDMPNKKPRHSLPEMSTVTLPHETVKVSENGDTLPHHGVTSSVERPTTNGL 597
>gi|389744511|gb|EIM85694.1| poly-A polymerase [Stereum hirsutum FP-91666 SS1]
Length = 628
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/586 (40%), Positives = 340/586 (58%), Gaps = 23/586 (3%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + + + + T L + L+ E++EE +R VL +L LVK ++++VS
Sbjct: 9 GVTPPISTTESSAREKEVTGTLMQELRRQKTFESEEEAKTREIVLGRLAALVKAFVRKVS 68
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+++ + A GGKI+TFGSYRLGVH G+DID LCV P+HV R D+F F + L+
Sbjct: 69 LSRGLSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVLREDFFDVFEQMLRET 128
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+ VT+ V EA+VP++K+ GI ID L ARLAL IPDD+ L+DD LL+NLD +C+RS
Sbjct: 129 EGVTECSGVPEAYVPIVKVKISGIPIDFLMARLALSTIPDDLSLQDDNLLRNLDDRCIRS 188
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
L G RVTDEILRLVPN+ FR +LR IKLWA++ IYSNV G+LGGV+WAMLVARICQLY
Sbjct: 189 LGGSRVTDEILRLVPNVNVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLY 248
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNA A +V +FF++ QW WPQPVLLK+ + L VW+P++ DR H MPIITPAY
Sbjct: 249 PNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPAY 308
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P +T NV+ ST+ IM EEFK+G I + + G W +LF +FF KYR+YL +IAS
Sbjct: 309 PAMCATHNVTASTQMIMTEEFKKGADIVDKVIVGTATWSELFAKHDFFHKYRYYLQIIAS 368
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTT--------GVIANGS 441
+ Q++W G +ES++R L+ LE + LAH + + + +A G
Sbjct: 369 TGDPALQIKWAGTVESRLRQLVMKLEFVESLQLAHPFIKGFEQISYCLSEEEMRAVAQGE 428
Query: 442 GSPEITAEGKE--EGGENTSPPVSGVASMWFIGLDFIAANV------ILNLTYDIQHFTN 493
S + KE EG E S + S ++IGL A L++++ FT
Sbjct: 429 VSEAVAQRKKEDIEGKEGASQVYT---STFYIGLAIEARQAGSVGPRKLDISWPTTEFTK 485
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA 553
V + K + M I VRH+K L +Y+ ++ K + + S K
Sbjct: 486 MVK---SWDKFDETKMGIIVRHIKSSTLPDYVFDAGERQPKPALTKKRPKSVKGTTRPNG 542
Query: 554 LDELGDKSRPRLD-SDSNSLSDKVNNISNNGDQSSSECTEDNSLSQ 598
+L RPR + S+S+S + +++ + S T +L Q
Sbjct: 543 SSDLPANKRPRASYAGSDSVSTETSSMIQTAENGRSSSTPTPALKQ 588
>gi|299748265|ref|XP_001837569.2| polymerase [Coprinopsis cinerea okayama7#130]
gi|298407893|gb|EAU84193.2| polymerase [Coprinopsis cinerea okayama7#130]
Length = 595
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/581 (42%), Positives = 348/581 (59%), Gaps = 34/581 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + N+ + + T L E L+ N E++EE +R VL ++ LVK+++ ++S
Sbjct: 13 GVTPPISTAESNEREKEVTVTLMEELRRQNTFESEEEARTREIVLGRVAALVKKFVYKIS 72
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
IA+ + + A+ GGKI+TFGSYRLGVH G+DID LCV P+HV R D+F +F LK +
Sbjct: 73 IARGLSESAAQAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTREDFFDTFEPMLKEM 132
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+ VT++ V EA+VP+IK DGI +D L ARL L IPDD+ L+DD LL+NLD++CVRS
Sbjct: 133 EGVTEVSGVPEAYVPIIKTEIDGIPLDFLMARLNLASIPDDLSLQDDNLLRNLDERCVRS 192
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
L G R +EILRLVPN++ FR ALR IKLWA++ IYSNV G+LGGV+WA+LVARICQLY
Sbjct: 193 LGGSRQVNEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWALLVARICQLY 252
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNA A +V +FF++ QW WPQPVLLK+ ++ L VW+P++ ADR H MPIITPAY
Sbjct: 253 PNALAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRAHRMPIITPAY 312
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P ST NV+ ST+ IM EEFK+G I + + G W +LF +FF KYR+YL +IAS
Sbjct: 313 PSMCSTHNVTASTQMIMTEEFKRGADIVDRVIVGTAQWSELFAKHDFFHKYRYYLQIIAS 372
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH--------VNPECYTDTTGVIANGS 441
+ + Q +W G +ES++R L+ LE + LAH V+ D + G
Sbjct: 373 TGDPDLQNKWSGTVESRIRQLVMKLEYVESLILAHPFIKGFDQVSYCLNEDEVKAVVQGE 432
Query: 442 GSPEITAEGKE--EGGENTSPPVSGVASMWFIGLDF--IAANVI----LNLTYDIQHFTN 493
S I + KE EG E + + + ++IGL A + L+++Y Q F+
Sbjct: 433 ISEAIASRKKEDIEGKEGSQ---TVYTTTFYIGLAIQPKPAGAVGPRRLDISYPTQDFSK 489
Query: 494 AVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL------PAHMLKKDKKTKSGDQNTSAK 546
V W K + M I VRH+K L + + PA + +K K KS + +S +
Sbjct: 490 LVKMW----DKYDESKMGIIVRHIKSSALPDNVFDPGERPAKVTQKRVKGKSSN-ISSEQ 544
Query: 547 KRKSDQALDELGDKSRPRLDSDSNSLSDKVNNI---SNNGD 584
K ++ + D RP + S + V + S NG+
Sbjct: 545 PNKRQRSSTSVADTIRPTENGTSTGTTPVVETLVRPSFNGN 585
>gi|328853642|gb|EGG02779.1| hypothetical protein MELLADRAFT_38417 [Melampsora larici-populina
98AG31]
Length = 529
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/507 (45%), Positives = 314/507 (61%), Gaps = 20/507 (3%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++++ P + + T L + LK E+ EE +R VL +LN LVKE++ +
Sbjct: 2 TYGVTGPISINGPTRAEELSTTALMDELKERRTFESPEEARARELVLGRLNLLVKEFVIK 61
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS+A + VA + GGKI+TFGSYRLGVH G+DID LCV PR V R +F + LK
Sbjct: 62 VSLALGMSDHVARETGGKIFTFGSYRLGVHGPGSDIDTLCVVPRQVTREHFFEILPQMLK 121
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
EVT+L V EAFVP+I + F GIE+D+LFARLAL +PDD++L+DD LLKNLD +CV
Sbjct: 122 ERPEVTELSTVPEAFVPIISLKFSGIEVDLLFARLALPSVPDDLELKDDALLKNLDDRCV 181
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSL G RVTDEILRLVP++E FR +LR IKLWAK +YSNV+G+ GGV+WAM AR+CQ
Sbjct: 182 RSLGGSRVTDEILRLVPDVEVFRHSLRAIKLWAKNRAVYSNVMGFCGGVAWAMCTARVCQ 241
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLG--FPVWDPRVNVADRYHLMPII 325
LYPN A+T+V +FF V SQW WP PVLLK + +G VW+P++ DR H MPII
Sbjct: 242 LYPNKPAATIVNRFFAVLSQWNWPSPVLLKAIGSGPIGDQRRVWNPKIYPQDRGHRMPII 301
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYP ST NV+ ST +M EFK+G +++ I G W LFE +FFT+YR+Y+
Sbjct: 302 TPAYPCMCSTHNVTKSTAQVMMTEFKRGLAVTDAIATGSAQWSALFEKHDFFTRYRNYIQ 361
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV-------IA 438
+ ASS A+ L+W G +ES++R L+ +E +++AH + +++TT +
Sbjct: 362 ITASSPEADAHLKWAGTVESRLRLLVLKVEEIETVDMAHPFIKGFSNTTYALNRQEVSLV 421
Query: 439 NGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANV------ILNLTYDIQHFT 492
G P A E EN + +F+GL V L++TY + FT
Sbjct: 422 QGGDMPNEIASRIPEDYENRADVEVVHTCSFFVGLLVHPKPVGHVGPRKLDITYPVGEFT 481
Query: 493 NAV-HWQATQSKMMKDGMKIEVRHVKK 518
V W+ +D M I VRH+KK
Sbjct: 482 RMVKQWEGYS----EDKMSISVRHIKK 504
>gi|393215900|gb|EJD01391.1| poly polymerase [Fomitiporia mediterranea MF3/22]
Length = 629
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/559 (43%), Positives = 328/559 (58%), Gaps = 25/559 (4%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ S + + T + + L+ E++EE +R VL ++ LVK+++ +V
Sbjct: 10 WGVTQPISSSESTDAEKKVTVAMMDELRRQGTFESEEEARTRELVLGRVATLVKKFVHKV 69
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
++++ + + A GGKI+TFGSYRLGVH G+DID LCV P+HV R D+F F L+
Sbjct: 70 ALSRGLSESAAAAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSREDFFEVFEPMLRE 129
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
V+ V+++ V EA+VP+IK+ GI ID L ARLAL IPDD+ LRDD LLKNLD++C+R
Sbjct: 130 VEGVSEVSGVPEAYVPIIKIKIQGIPIDFLMARLALSSIPDDLSLRDDNLLKNLDERCIR 189
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RVTDEILRLVPN+ FR ALR IKLWA++ IYSNV G+LGGV+WAMLVARICQL
Sbjct: 190 SLNGSRVTDEILRLVPNVAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQL 249
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA A +V +FF++ QW WPQPVLLK+ + L VW+PR+ DR H MPIITPA
Sbjct: 250 YPNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPRLYPGDRSHRMPIITPA 309
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T NV+ ST+ IM EEFK+G I + I G W LF +FF KYR+YL +IA
Sbjct: 310 YPAMCATHNVTESTQMIMTEEFKRGADIVDKIVFGSLQWSALFAKHDFFHKYRYYLQIIA 369
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH-------VNPECYTDTTGVIANGS 441
S+ + + Q++W G +ES++R L+ LE + LAH C D +
Sbjct: 370 STGNPDLQIKWAGTVESRIRQLVMKLEYVDALTLAHPFIKGFDQTLHCLNDEEVRLCASG 429
Query: 442 GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF------IAANVILNLTYDIQHFTNAV 495
PE K+E E + + +FIGL L+++Y FT V
Sbjct: 430 EVPEAVLRRKKEEAEGKEGASTVHTTTFFIGLAIEPKQPGSTGPRRLDISYPTTEFTKLV 489
Query: 496 H-WQATQSKMMKDGMKIEVRHVKKKQLSEYL----PAHMLKKDKKTKSGD---QNTSAKK 547
W K + M I VRH+K L +Y+ LK+ K T G NT+ +
Sbjct: 490 KMW----DKYDESSMGIVVRHIKNSSLPDYVFEEGAKPNLKRAKSTNRGQGKSNNTTPDQ 545
Query: 548 RKSDQALDELGDKSRPRLD 566
Q E+ DKS D
Sbjct: 546 PNKKQKKYEVFDKSLAFFD 564
>gi|388578995|gb|EIM19325.1| Poly(A) polymerase, partial [Wallemia sebi CBS 633.66]
Length = 557
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/518 (45%), Positives = 320/518 (61%), Gaps = 30/518 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++L+ P L+ Q L + LK N E+++E +R +VL+ + +LVKE++K VS
Sbjct: 1 GITPPISLASPTDLEKQVDAGLIQELKDQNTIESEQESLNREKVLALVQSLVKEFVKRVS 60
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
I + ++A++ GGKI+TFGSYRLGV+ GADID LCV P+HV R D+F F LKT
Sbjct: 61 IRNGMSESLADQAGGKIFTFGSYRLGVNQPGADIDTLCVVPKHVSREDFFDVFEPLLKTR 120
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+EV+ V +A+VP+IK GIEID L ARLAL IPDD++L DD LLKNLD++CVRS
Sbjct: 121 EEVSVCAGVPDAYVPIIKTTISGIEIDFLVARLALATIPDDLELADDNLLKNLDERCVRS 180
Query: 210 LN-------GCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
LN G RVTDEILR+VPN++ FR +LR IKLWA++ IYSNV G+LGGV+WAMLV
Sbjct: 181 LNDNLTIIIGSRVTDEILRVVPNVQVFRESLRCIKLWAQRRAIYSNVNGFLGGVAWAMLV 240
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
ARICQLYPN A ++ KFF + QWKWP PVLLK+ ++ L VW+P++ +DR H M
Sbjct: 241 ARICQLYPNENAGAVIAKFFTILYQWKWPHPVLLKEIEDGPLKVRVWNPKIYPSDRAHRM 300
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRH 382
PIITPAYP ST NV ST+ +M++EFK+G I + I+ G T W +LF FF+KY+H
Sbjct: 301 PIITPAYPSMCSTHNVGPSTQEVMRQEFKRGMDILDGIHKGTTTWSQLFNKHEFFSKYKH 360
Query: 383 YLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI----- 437
YL +IAS +AE Q +W G +ESKVR L+ LE I LAH + +++ +
Sbjct: 361 YLQIIASGQTAESQKKWSGAVESKVRQLVSKLELVDGIELAHPFVKGFSEVFICLNDEEV 420
Query: 438 ---ANGSGSPEITAEGKEEGGENTSPPVSGV----ASMWFIGLDFIAAN------VILNL 484
A + S E+ K+ G+ S ++IGL N LNL
Sbjct: 421 QHAAEYNPSEEVKERSKKPEEYENKEAEDGIHRVYISTFYIGLAIQPRNPETNEKRTLNL 480
Query: 485 TYDIQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQL 521
TY F W + ++ MKI V+++K L
Sbjct: 481 TYPTNEFMKLTKLW----DQFVEGEMKIFVKNIKASAL 514
>gi|255567792|ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha, putative [Ricinus communis]
Length = 770
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 248/635 (39%), Positives = 362/635 (57%), Gaps = 57/635 (8%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
Q + G+T ++L P + DL ++REL + L+ + E+ EE SR EVL +L+ +VK
Sbjct: 12 GQQQLRLGITDPISLGGPTEYDLIKSRELEKFLQDMGLYESREESVSREEVLGRLDQIVK 71
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSS 141
W+K +S AK + + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F
Sbjct: 72 HWVKVISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 131
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
L + EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+D+D+ D +L+N
Sbjct: 132 LHRMLSEMPEVTELHPVPDAHVPVLKFKFKGVSIDLLYAKLSLWVIPEDLDISQDSILQN 191
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
D++ VRSLNGCRVTD+ILRLVPNI+NFR LR ++ WAK+ G+YSNV G+LGG++WA+L
Sbjct: 192 ADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALL 251
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VARICQL+PNA + LV +FF V++QW+WP PV+L + +LG VWDPR N DRYHL
Sbjct: 252 VARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRYHL 311
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYP NS++NVS ST IM EEF++G I E + K W+ LFE+ +FF Y+
Sbjct: 312 MPIITPAYPSMNSSYNVSASTLRIMSEEFQRGNEICEAMEASKADWNTLFESFSFFDAYK 371
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANG 440
+YL + + + +D +W G +ES++R L +ER+ L H +P +TD +
Sbjct: 372 NYLQIDIGAENEDDLRKWKGWVESRLRQLTLKIERHTFNMLQCHPHPGEFTDKS------ 425
Query: 441 SGSPEITAEGKEEGGENTSPPVSGVASMWFIGL---DFIAANVILNLTYDIQHFTNAVHW 497
+ +F+GL + AN +DI+
Sbjct: 426 ----------------------RPLHCSYFMGLQRKQGVPANE--GEQFDIRITVEEFKI 461
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKS--GDQNTSAKKRKSDQALD 555
K GM+I V HVK++ + ++ ++ + +K+ + +SA+K + +
Sbjct: 462 SVNMYTSWKPGMEIHVTHVKRRNIPSFVFPGGIRPSRPSKTTWDSKRSSAEKSGEGKGVS 521
Query: 556 ELGDK--SRPRLDS-----------DSNS-LSDKVNNISNNGDQSSSECTEDNSLSQVYG 601
+ D R R+D DS S LS +VNN S + S T N++ +
Sbjct: 522 DGSDDKGKRKRIDDNVANATKIAKPDSTSPLSGEVNNGSPSAGTVSLLLTSTNAVGEPRD 581
Query: 602 --LNDSVADSIDNSLDDLSSTSPHP---TPPVKVL 631
+ +++ D NS DL+ H PP KVL
Sbjct: 582 EPVENNLTDDFSNS-KDLTGFYAHNGELNPPNKVL 615
>gi|71023817|ref|XP_762138.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
gi|46101730|gb|EAK86963.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
Length = 667
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 254/648 (39%), Positives = 362/648 (55%), Gaps = 65/648 (10%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T + + P +++ T+ L L+ V E+DEE R +L KL+ +VK+++ VS
Sbjct: 21 GVTPPIATNGPTSREIEVTKTLVAELEKQGVFESDEESKIREVILGKLDAMVKDFVYRVS 80
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
I+ + T+A GGKI+TFGSYRLGVH G+DID LCV P+HV R D+FS F LK
Sbjct: 81 ISHGMSETLARSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQREDFFSVFESMLKER 140
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+EVT++ V A VP+I F G++ID FARLAL + D++ L DD LL+NLD++ VRS
Sbjct: 141 EEVTEVAGVPTAHVPLIAAKFMGVDIDFTFARLALPRVEDNLSLEDDNLLRNLDERDVRS 200
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
L G RVTD ILRLVPNI FR+ALR IKLWA++ IYSNV+G+LGGV+WAML ARICQLY
Sbjct: 201 LGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTARICQLY 260
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PN AA +V +FF++ QWKWPQPVLL + ++ L VW+P++ +DR H MPIITPAY
Sbjct: 261 PNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAY 320
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P +T NVS ST+ +M EFK+ + + + GKT WD+LF +FF KY++YL +IAS
Sbjct: 321 PGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTNWDELFAKHDFFFKYKYYLQVIAS 380
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH-------VNPECYTD-TTGVIANGS 441
S SA+ QL+W G +ESK+R L+ LE P I AH EC+ D ++A G
Sbjct: 381 SGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECWNDHEVRLVATGD 440
Query: 442 GSPEITAEGKE----------------------EGGENTSPPVSGVASMWFIGLDF---I 476
E+ ++ EG E + + ++IGL +
Sbjct: 441 IPEEVAQRTQKVAALPETDEAKQAAAEEAARVTEGKEGHRMIYT---TTFYIGLSIEPKL 497
Query: 477 AAN--VILNLTYDIQHFTNAV-HWQATQSKMMKDGMKIEVRHVKKKQLSEY--------L 525
A L+++Y FT V W+ + + M I VRH+K QL Y +
Sbjct: 498 AGEGPRKLDISYPTAEFTGKVKQWE----QYDEASMGIVVRHIKWTQLPGYVFEGGENRV 553
Query: 526 PAHMLKK--DKKTKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNG 583
A + K K+ KSG+ KK+ A +G ++ + + + SD + + N
Sbjct: 554 SAAAVSKVNGKRAKSGN-----KKKNGSDATTSVGAQAATGQTNGTYADSDTLTAVDNGD 608
Query: 584 DQSSSECTEDNSLSQVYGLNDSV------ADSIDNSLDDLS-STSPHP 624
+ +S + + G S A++ L++ +T HP
Sbjct: 609 AEMASPTKKQRIVPDTLGATASTPTLPLQAETASKELENFQLATGNHP 656
>gi|224284360|gb|ACN39915.1| unknown [Picea sitchensis]
Length = 701
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/531 (41%), Positives = 320/531 (60%), Gaps = 30/531 (5%)
Query: 24 QAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKE 83
+A YG+T ++LS P+ DLQR+REL E L + E++EE + R EVL++++ +VK+
Sbjct: 15 EATRQYGITKPISLSGPSGSDLQRSRELEEFLVSAGLYESEEESALREEVLAQIDQIVKQ 74
Query: 84 WIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSF 142
W+K+++ K + E+ K++TFGSYRLGVH GADID LCV P + D+ D+F
Sbjct: 75 WVKQLTREKGYTEQMVEESNAKVFTFGSYRLGVHGPGADIDTLCVGPEYADQEEDFFILL 134
Query: 143 FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNL 202
+ L + EV +L V +A VPV+K F GI ID+L+A +AL+ +PDD+D+ + +L N+
Sbjct: 135 HDMLAEMPEVMELNRVPDAHVPVMKFKFRGISIDLLYASVALRIVPDDLDISQESVLYNV 194
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D++ VRSLNGCRV ++ILRLVPN+E+FR LR +K WAK+ G+YSNV G+LGGV+WA+LV
Sbjct: 195 DEQTVRSLNGCRVNEQILRLVPNVEHFRTTLRCMKFWAKRRGVYSNVTGFLGGVNWALLV 254
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR+CQLYPNA S LV +FF VF+QW+WP PV+L+ LGFPVWDPR N DR H M
Sbjct: 255 ARVCQLYPNAIPSMLVSRFFRVFTQWRWPNPVMLRSIKEEELGFPVWDPRKNPRDRTHHM 314
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRH 382
PIITPAYP NS++NVS ST +M E+F+QG + EDI K W LF+ FF Y++
Sbjct: 315 PIITPAYPGMNSSYNVSTSTLRVMTEQFQQGNKMCEDIEMNKANWSALFDPYPFFEAYKN 374
Query: 383 YLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSG 442
YL + + +D W G +ES++R L +ER+ L +C+ T + N
Sbjct: 375 YLQVDIVAADQDDLRLWKGWVESRLRQLTLKIERDTFGML-----QCHPYPTEYVDNSKQ 429
Query: 443 SPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVIL-NLTYDIQHFTNAVHWQATQ 501
P +F+GL +I +DI+ +
Sbjct: 430 CPHCA---------------------FFMGLQRKQGVLIQEGQQFDIRGTVDEFRQSVGM 468
Query: 502 SKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQ--NTSAKKRKS 550
K GM I V HV++KQ+ Y+ +++ + ++ +Q TS + R+S
Sbjct: 469 YMFWKPGMDIYVSHVRRKQIPSYVFPEGVRRVRSGRAANQIGKTSPQGRES 519
>gi|395329948|gb|EJF62333.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 606
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 255/590 (43%), Positives = 349/590 (59%), Gaps = 40/590 (6%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ S N + + T L E L+ + E++EE R VL +L L+K+++K VS
Sbjct: 9 GVTPPISTSESNPREKEVTVTLLEELRRQGIFESEEEAKMREIVLGRLAALIKKFVKRVS 68
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+A+ + + A GGKIYTFGSYRLGVH G DID LCV PRHV R D+F+ L+ +
Sbjct: 69 LARGLSESAANSAGGKIYTFGSYRLGVHGPGTDIDTLCVVPRHVTREDFFNVLEGMLREM 128
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+ VT++ V EAFVP+IK GI ID+LFA+L+L IPDD+DLRDD LLKNLD++CVRS
Sbjct: 129 EGVTEVSGVPEAFVPIIKTEISGIPIDLLFAQLSLAAIPDDLDLRDDNLLKNLDERCVRS 188
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNG RV +EILRLVPN++ FR ALR IKLWA++ IYSNV G+LGGV+WAMLVARICQLY
Sbjct: 189 LNGSRVINEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLY 248
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNA A +V +FF++ +W WPQPVLLK ++ L VW+PR+ DR H MPIITPAY
Sbjct: 249 PNAVAGAIVSRFFIIMHRWSWPQPVLLKPIEDGPLQVRVWNPRLYPQDRNHRMPIITPAY 308
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P +T NV ST+ IM EEFK+G I + + +G+ W LF +FF +YR YL +IAS
Sbjct: 309 PSMCATHNVMASTQQIMTEEFKRGSEIVDQVISGEVQWSALFAKHDFFFRYRFYLQVIAS 368
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY--------TDTTGVIANGS 441
S + Q +W G +ESK+R L+ LE + LAH + + D T +A G
Sbjct: 369 SPDLDTQNKWSGTVESKIRQLVMRLEFVDTLKLAHPFIKGFDTVYYCLSEDETRAVARGE 428
Query: 442 GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANV------ILNLTYDIQHFTNAV 495
PE A K+E + +F+GL L+++Y F V
Sbjct: 429 -IPEAVANRKQEDIAGKEGATTMYTKSFFVGLSIKPKEAGATGPRKLDISYPTNEFIKMV 487
Query: 496 H-WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQAL 554
W+ K + M I VRH+K L +++ DK G++ +A+ +K +
Sbjct: 488 RLWE----KYDESQMNIVVRHIKHTALPDFV------FDK----GEREAAARPKKRSRTA 533
Query: 555 DELGDKS--RPRLDSDSNSLSD-----KVNNISNNGDQSSSECTEDNSLS 597
E S R R++SD+ + D K + IS+ G Q S T D+S+S
Sbjct: 534 KESPAPSAKRSRMESDTPARPDSESPLKRSTISSQGRQLS---TPDSSMS 580
>gi|341895839|gb|EGT51774.1| hypothetical protein CAEBREN_25710 [Caenorhabditis brenneri]
Length = 527
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/545 (42%), Positives = 332/545 (60%), Gaps = 44/545 (8%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG++ ++L+ P DL T L + LK + E EE + R++VL LN VK+WI+ +
Sbjct: 15 YGVSQPISLAQPTPKDLSLTCSLLQELKSFGSFEEKEETTKRIQVLQFLNATVKKWIQSI 74
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S A +P + GG++ +FGSYRLGVH G DID++ +APR V R+D+F+S + L
Sbjct: 75 S-ATRLPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVTRSDFFTSLKDILLR 133
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
V +L AVE+AFVP++ F G+++D+LFARL L IP+ +DL DD LLKN+DQ+ VR
Sbjct: 134 NPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVR 193
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RV +++L+LVPN E+F + LR IK+WAK HG+YSN +G+ GG++WA+LVAR CQL
Sbjct: 194 SLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQL 253
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLL-----KKPDNVNLGFPVWDPRVNVADRYHLMP 323
YPNA+ S LV K F VFS W +P P++L ++PD + L W N ADR+HLMP
Sbjct: 254 YPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLTLDNLCWGR--NHADRFHLMP 311
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHY 383
IITPA+P+QNST NVS ST ++++E I D++ GK W LFE NF+++Y+H+
Sbjct: 312 IITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDVFEGKCDWKHLFEELNFYSQYKHF 371
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGS 443
+VL + E + + G +ES++R L+G ERN I LAH+NP+
Sbjct: 372 VVLKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPK--------------- 416
Query: 444 PEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSK 503
P S S+WFIGL+F ++LT +I +F ++ QA Q
Sbjct: 417 --------------KCQPTSKAQSLWFIGLEFDEVVKNMDLTREIDNFKWNLNVQAKQIP 462
Query: 504 MMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK----KTKSGD--QNTSAKKRKSDQALDEL 557
+D +++++ +VK+ QL +YLPA LKK + K S D +N KRK D + +
Sbjct: 463 GFED-VELDISYVKRSQLIKYLPAAELKKGRFHVAKGSSDDNKENAGVLKRKCDNPMSSV 521
Query: 558 GDKSR 562
K R
Sbjct: 522 VSKKR 526
>gi|308510522|ref|XP_003117444.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
gi|308242358|gb|EFO86310.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
Length = 513
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/548 (43%), Positives = 319/548 (58%), Gaps = 67/548 (12%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T+G++ +++ PN+ DL + L E LK +N E EE S R++VL+KLN LVK+WI
Sbjct: 9 TFGISQPISMDFPNKKDLLLNKSLTETLKSFNCFEPSEETSQRVKVLNKLNFLVKKWIHL 68
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
++I + IP V GGK+ FGSYRLGVH G+DID L +APRHV R D+ F
Sbjct: 69 LTITR-IPMDV--DAGGKLIAFGSYRLGVHSSGSDIDTLVLAPRHVTRLDFILENFT--- 122
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
AFVP++ + GI+ID+LFARL + +PD++DL DD +LKNLD + V
Sbjct: 123 -------------AFVPIMTFKYSGIDIDLLFARLDMPTVPDNIDLSDDNILKNLDPESV 169
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRV +++L+ VPN F LR +KLWAK HGIYSN +G+ GG++WA+LVAR CQ
Sbjct: 170 RSLNGCRVAEQLLKQVPNQSTFCETLRAVKLWAKNHGIYSNAIGFFGGIAWAILVARTCQ 229
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN----VNLGFPVWDPRVNVADRYHLMP 323
LYPNAA S L+ K F VFS W WP PV+LK +N NL VWDPR N ADR HLMP
Sbjct: 230 LYPNAAPSKLIQKVFFVFSTWNWPSPVILKHMENRFDMQNLSQLVWDPRRNYADRLHLMP 289
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHY 383
IITP++P+QNST NVS ST ++Q E K+ I E + GK W L E NFF KYRH
Sbjct: 290 IITPSFPEQNSTHNVSRSTLQVIQNEMKEAFKICEHVQKGKATWKDLLEETNFFCKYRH- 348
Query: 384 LVLIASSVSAEDQLE---WCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANG 440
LIA S++AE + E + G ES++R L+ LERN + +A VN +
Sbjct: 349 --LIAVSINAEKEKEDTDFAGFFESRIRQLVQLLERNSQVQIAQVNTRKF---------- 396
Query: 441 SGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQAT 500
P S S WFIGL+FI A L+LT +I+ F +
Sbjct: 397 ------------------KAPFSPGKSQWFIGLEFIQAAKNLDLTEEIKRFKKII---GN 435
Query: 501 QSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKK----DKKTKSGDQNTSAKKRKSDQALDE 556
Q+K ++I+ +VKK +L Y+ A LK+ K T +N + K+ + Q+ D
Sbjct: 436 QAKEKIGTVQIDAAYVKKSKLITYISAAELKRGKFMKKDTSPEKENANRKRPTTTQSGD- 494
Query: 557 LGDKSRPR 564
D +PR
Sbjct: 495 --DVKKPR 500
>gi|327262763|ref|XP_003216193.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Anolis carolinensis]
Length = 678
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/394 (55%), Positives = 270/394 (68%), Gaps = 29/394 (7%)
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EV +AVE+A+VPVIK FDGIEID++FARLAL I D++DLRDD LK+LD +C+R
Sbjct: 99 IAEVGKNKAVEDAYVPVIKFEFDGIEIDLVFARLALPTISDNLDLRDDSSLKSLDIRCIR 158
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGY--LGGVSWAMLVARIC 266
SLNG RVTDEIL LVPN ENFRL LR IKLWAK+ + + +L Y L +SWA+L C
Sbjct: 159 SLNGFRVTDEILHLVPNKENFRLTLRAIKLWAKRKYLINLILCYQPLCLISWAVLSXITC 218
Query: 267 QLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIIT 326
++Y N S V + + FS +WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIIT
Sbjct: 219 KIYQNGRGSFSVNRCYSSFSFREWPNPVLLKEPEESNLNLPVWDPRVNPSDRYHLMPIIT 278
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVL 386
PAYPQQNST+NVS STR IM EEFK G ++++I+ GK+ W KL E PNFF KY+HY+VL
Sbjct: 279 PAYPQQNSTYNVSTSTRAIMVEEFKHGLVVADEIFQGKSDWPKLLEPPNFFQKYKHYIVL 338
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEI 446
ASS + E LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 339 TASSSTEEHHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFP--------------- 383
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGLDFIAA----NVILNLTYDIQHFTNAVHWQATQS 502
G T P S S+WF+G+ F A +V ++LTYDIQ FT+ V+ QA
Sbjct: 384 --------GNRTQPKESDYVSLWFLGIIFKKAENAESVNIDLTYDIQSFTDTVYRQANNI 435
Query: 503 KMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKT 536
M+K+GMKIE HVKKKQL YLPA +L+K KK+
Sbjct: 436 NMLKEGMKIEATHVKKKQLHYYLPADLLQKRKKS 469
>gi|187469283|gb|AAI67010.1| Papola protein [Rattus norvegicus]
Length = 317
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/298 (70%), Positives = 252/298 (84%), Gaps = 1/298 (0%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRV+V
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSV 306
>gi|336374059|gb|EGO02397.1| hypothetical protein SERLA73DRAFT_120990 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386978|gb|EGO28124.1| hypothetical protein SERLADRAFT_367679 [Serpula lacrymans var.
lacrymans S7.9]
Length = 558
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/549 (44%), Positives = 330/549 (60%), Gaps = 35/549 (6%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + + T L E L+ N ET+EE R VL ++ LVK+++++VS
Sbjct: 9 GVTPPISTGESTNREKEVTATLMEELRRQNTIETEEESRRREVVLGRVAALVKKFVRQVS 68
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+A+ + A GGKI+TFGSYRLGVH G+DID LCV P+HV R D+F F LK
Sbjct: 69 MARGLSEAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSREDFFEVFEPMLKEA 128
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
D +++ V EA+VP+IK GI D+L ARLAL IPDD+ L+DD LL+NLD++C+RS
Sbjct: 129 DGASEVSGVPEAYVPIIKAKLMGIPFDLLMARLALSSIPDDLSLKDDNLLRNLDERCIRS 188
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
L G RV DEILRLVPN+ FR +LR IKLWA++ IYSNV G+LGGV+WAMLVARICQLY
Sbjct: 189 LGGSRVVDEILRLVPNVHVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLY 248
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNA A +V +FF++ QW WPQPVLLK+ + L VW+P++ ADR H MPIITPAY
Sbjct: 249 PNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPADRSHRMPIITPAY 308
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P ST NV+ ST+ IM EEFK+G I + + G W +LF +FF KYR+YL +IAS
Sbjct: 309 PAMCSTHNVTASTQMIMTEEFKKGADIVDKVIVGTAEWSELFAKHDFFHKYRYYLQVIAS 368
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYTD-TTGVIANGS 441
+ SA+ Q++W G +ES++R L+ LE + LAH + C +D +A G
Sbjct: 369 TGSADLQIKWSGTVESRIRQLVMKLEYVDSLILAHPFIKGFEQIAYCTSDEEVRAVAQGE 428
Query: 442 GSPEITAEGKEE-GGENTSPPVSGVASMWFIGLDF------IAANVILNLTYDIQHFTNA 494
S IT KE+ G + V + ++IGL A L+++Y FT
Sbjct: 429 TSDAITRRKKEDIAGVEGATEVH--TTTFYIGLAIEPKQPGAAGPRRLDISYPTTEFTKL 486
Query: 495 VH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL-------PAHMLKKDKKTK-SGDQNTSA 545
V W+ K + M I VRH+K L +Y+ P LK+ K K SG N ++
Sbjct: 487 VKMWE----KYDEPTMGIVVRHIKSAALPDYVFDEGERQPRQALKRPKTAKGSGKSNHTS 542
Query: 546 -----KKRK 549
KKR+
Sbjct: 543 PDVPNKKRR 551
>gi|58220769|gb|AAW68016.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 748
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/587 (39%), Positives = 336/587 (57%), Gaps = 45/587 (7%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++LS P + D+ RT+E+ +CL + E+ EE SR EVL KL+ +VK WIK+ +
Sbjct: 12 GVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKAT 71
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF-SSFFEKLKT 148
A ++ KI+TFGSYRLGVH GADID LCV PRH R +YF + ++ L
Sbjct: 72 RASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVD 131
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EVT+L V +A VPV+K +G+ ID+L+A L IP+D+DL D +L N+D++ VR
Sbjct: 132 MPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVR 191
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD+ILRLVPNI FR LR+++ WAK+ G+YSNV+G+LGG++WA+LVARICQL
Sbjct: 192 SLNGCRVTDKILRLVPNILTFRTTLRSLRFWAKRRGVYSNVIGFLGGINWALLVARICQL 251
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA+ S L+ +FF V+S+WKWP PV+L + +LG VWDPR N DR H MPIITPA
Sbjct: 252 YPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPA 311
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVSISTR +M +EF + I + I + WD LFE FF YR+YL +
Sbjct: 312 YPSMNSSYNVSISTRHVMVQEFTRASDICQAIDEREADWDALFEPYPFFESYRNYLKIEI 371
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLER-NPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
++ + +D W G +ES++R L+ +ER + L+H NP + D++
Sbjct: 372 TARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSS------------- 418
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGL-DFIAANVILNLTYDIQHFTNAVHWQATQSKMMK 506
+ +F+GL + YDI+ N + +
Sbjct: 419 ---------------RPLHCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWR 463
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRLD 566
+GM+IEV HVK+K + ++ ++ + +++ + A R + A + +++ P +
Sbjct: 464 EGMEIEVSHVKRKDIPSFVFPGRIRPSRPSRTVGKEARAVSRSNISA--NVQERNVPSMA 521
Query: 567 SDSNSLSDKVNNI------------SNNGDQSSSECTEDNSLSQVYG 601
S +VN I NN SS C E + Y
Sbjct: 522 QPMPYKSSEVNKIPSDPHGGYQSQERNNAVVSSLPCEETGHMFNGYA 568
>gi|119602052|gb|EAW81646.1| poly(A) polymerase alpha, isoform CRA_d [Homo sapiens]
Length = 317
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/309 (69%), Positives = 257/309 (83%), Gaps = 3/309 (0%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRV+V
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVL- 307
Query: 318 RYHLMPIIT 326
+ +PI T
Sbjct: 308 -FFPLPIHT 315
>gi|218198073|gb|EEC80500.1| hypothetical protein OsI_22746 [Oryza sativa Indica Group]
Length = 748
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/587 (39%), Positives = 335/587 (57%), Gaps = 45/587 (7%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++LS P + D+ RT+E+ +CL + E+ EE SR EVL KL+ +VK WIK+ +
Sbjct: 12 GVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKAT 71
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF-SSFFEKLKT 148
A ++ KI+TFGSYRLGVH GADID LCV PRH R +YF + ++ L
Sbjct: 72 RASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVD 131
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EVT+L V +A VPV+K +G+ ID+L+A L IP+D+DL D +L N+D++ VR
Sbjct: 132 MPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVR 191
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD+ILRLVPNI FR LR ++ WAK+ G+YSNV+G+LGG++WA+LVARICQL
Sbjct: 192 SLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQL 251
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA+ S L+ +FF V+S+WKWP PV+L + +LG VWDPR N DR H MPIITPA
Sbjct: 252 YPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPA 311
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVSISTR +M +EF + I + I K WD LFE FF YR+YL +
Sbjct: 312 YPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEI 371
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLER-NPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
++ + +D W G +ES++R L+ +ER + L+H NP + D++
Sbjct: 372 TARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSS------------- 418
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGL-DFIAANVILNLTYDIQHFTNAVHWQATQSKMMK 506
+ +F+GL + YDI+ N + +
Sbjct: 419 ---------------RPLHCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWR 463
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRLD 566
+GM+IEV HVK+K + ++ ++ + +++ + A R + A + +++ P +
Sbjct: 464 EGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVGKEARAVSRSNISA--NVQERNVPSMA 521
Query: 567 SDSNSLSDKVNNI------------SNNGDQSSSECTEDNSLSQVYG 601
S +VN I NN SS C E + Y
Sbjct: 522 QPMPYKSSEVNKIPSDPHGGYQSQERNNAVVSSLPCEETGHMFNGYA 568
>gi|341899942|gb|EGT55877.1| hypothetical protein CAEBREN_08096 [Caenorhabditis brenneri]
Length = 528
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/545 (41%), Positives = 332/545 (60%), Gaps = 44/545 (8%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG++ ++L+ P D+ T L + LK + E EE + R++VL LN VK+WI+ +
Sbjct: 16 YGVSQPISLAQPTPKDISLTCSLLQELKSFGSFEAKEETTKRIQVLQFLNATVKKWIQGI 75
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S A +P + GG++ +FGSYRLGVH G DID++ +APR V RAD+F+S + L
Sbjct: 76 S-ASRLPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRADFFTSLKDILIR 134
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
V +L AVE+AFVP++ F G+++D+LFARL L IP+ +DL DD LLKN+DQ+ VR
Sbjct: 135 NPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVR 194
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RV +++L+LVPN E+F + LR IK+WAK HG+YSN +G+ GG++WA+LVAR CQL
Sbjct: 195 SLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVARACQL 254
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLL-----KKPDNVNLGFPVWDPRVNVADRYHLMP 323
YPNA+ S LV K F VFS W +P P++L ++PD + L W N ADR+HLMP
Sbjct: 255 YPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWGR--NHADRFHLMP 312
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHY 383
IITPA+P+QNST NVS ST ++++E TI D++ GK W LFE NF+++Y+H+
Sbjct: 313 IITPAFPEQNSTHNVSRSTMEVIKKEMTDALTICNDVFEGKCDWKHLFEEVNFYSQYKHF 372
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGS 443
+V+ + E + + G +ES++R L+G ERN I LAH+NP+
Sbjct: 373 VVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPK--------------- 417
Query: 444 PEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSK 503
P S S+WFIGL+F ++LT +I +F ++ QA Q
Sbjct: 418 --------------KCQPTSKSQSLWFIGLEFDEVVKNMDLTREINNFKWNLNVQAKQIA 463
Query: 504 MMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK----KTKSGD--QNTSAKKRKSDQALDEL 557
+D +++++ +VK+ L +YLPA LKK + K S D +N KRK D + +
Sbjct: 464 GFED-VELDISYVKRSHLIKYLPAAELKKGRFFVAKASSDDNKENAGGMKRKCDTPMSFV 522
Query: 558 GDKSR 562
K +
Sbjct: 523 ASKKQ 527
>gi|392568430|gb|EIW61604.1| poly-A polymerase [Trametes versicolor FP-101664 SS1]
Length = 652
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/548 (43%), Positives = 330/548 (60%), Gaps = 32/548 (5%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
+ + P G+T + ++ + + T L E L+ E++ E +R VL +L LV
Sbjct: 10 RRRTPKYLGVTPPIAVAESTPREKEVTVTLLEELRRQGTFESEAEAKTREIVLGRLAALV 69
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
K+++ +VS+++ + A GGKI+TFGSYRLGVH G+DID LCV P+HV R D+F
Sbjct: 70 KKFVHQVSLSRGLSEAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSREDFFDV 129
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F + LK + V ++ V +A+VP+IK GI ID++ ARLAL I DD+ L+DD LL+N
Sbjct: 130 FEDMLKETEGVIEVSGVPDAYVPIIKTKISGIPIDLVMARLALSTISDDLSLQDDNLLRN 189
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
LD++CVRSLNG RVTDEILRLVPN+ FR ALR IKLWA++ IYSNV G+LGGV+WAML
Sbjct: 190 LDERCVRSLNGSRVTDEILRLVPNVTVFRNALRCIKLWAQRRAIYSNVNGFLGGVAWAML 249
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VARICQLYPNA A +V +FF++ QW WPQPV+LK ++ L VW+P++ ADR H
Sbjct: 250 VARICQLYPNAIAGAIVSRFFIIMYQWTWPQPVMLKPIEDGPLPVRVWNPKLYPADRAHR 309
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYP +T NV+ ST+ IM EEFK+ I ++I GK W LF +FF KYR
Sbjct: 310 MPIITPAYPSMCATHNVTQSTQMIMTEEFKKASDIVDNIIVGKASWSDLFAKHDFFHKYR 369
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYTD-T 433
+YL +IAS+ + Q++W G +ES++R L+ LE + LAH + C TD
Sbjct: 370 YYLQVIASTGGPDVQIKWSGTVESRIRQLVMKLEYVESLALAHPFIKGFEQVSYCLTDEE 429
Query: 434 TGVIANGSGSPEITAEGKE--EGGENTSPPVSGVASMWFIGLDF------IAANVILNLT 485
+A G S I KE EG E S + ++ ++IGL L+++
Sbjct: 430 VRAVAQGEISEAIAKRKKEDIEGVEGGS---AVYSTTFYIGLVVEPRQPGSVGPRRLDIS 486
Query: 486 YDIQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL------PAHMLKKDKKTKS 538
Y FT V W+ K ++ M I VRH++ L +Y+ + +K TK+
Sbjct: 487 YPTTEFTKLVKMWE----KFDENKMGIVVRHIRSAILPDYVFDEGERQPRLAQKRPNTKT 542
Query: 539 GDQ--NTS 544
D+ NTS
Sbjct: 543 TDRFNNTS 550
>gi|222635475|gb|EEE65607.1| hypothetical protein OsJ_21148 [Oryza sativa Japonica Group]
Length = 748
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/587 (39%), Positives = 335/587 (57%), Gaps = 45/587 (7%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++LS P + D+ RT+E+ +CL + E+ EE SR EVL KL+ +VK WIK+ +
Sbjct: 12 GVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKAT 71
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF-SSFFEKLKT 148
A ++ KI+TFGSYRLGVH GADID LCV PRH R +YF + ++ L
Sbjct: 72 RASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVD 131
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EVT+L V +A VPV+K +G+ ID+L+A L IP+D+DL D +L N+D++ VR
Sbjct: 132 MPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVR 191
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD+ILRLVPNI FR LR ++ WAK+ G+YSNV+G+LGG++WA+LVARICQL
Sbjct: 192 SLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQL 251
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA+ S L+ +FF V+S+WKWP PV+L + +LG VWDPR N DR H MPIITPA
Sbjct: 252 YPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPA 311
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVSISTR +M +EF + I + I K WD LFE FF YR+YL +
Sbjct: 312 YPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEI 371
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLER-NPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
++ + +D W G +ES++R L+ +ER + L+H NP + D++
Sbjct: 372 TARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSS------------- 418
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGL-DFIAANVILNLTYDIQHFTNAVHWQATQSKMMK 506
+ +F+GL + YDI+ N + +
Sbjct: 419 ---------------RPLHCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWR 463
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRLD 566
+GM+IEV HVK+K + ++ ++ + +++ + A R + A + +++ P +
Sbjct: 464 EGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVGKEARAVSRSNISA--NVQERNVPSMA 521
Query: 567 SDSNSLSDKVNNI------------SNNGDQSSSECTEDNSLSQVYG 601
S +VN I NN SS C E + Y
Sbjct: 522 QPMPYKSSEVNKIPSDPHGGYQSQERNNAVVSSLPCEETGHMFNGYA 568
>gi|449682525|ref|XP_002165152.2| PREDICTED: poly(A) polymerase gamma-like, partial [Hydra
magnipapillata]
Length = 351
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/372 (59%), Positives = 268/372 (72%), Gaps = 30/372 (8%)
Query: 175 IDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALR 234
ID+LFARLAL IP+D+DL D+ LLKNLD +CVRSLNGCRVTDEIL LVPNI NFR+ LR
Sbjct: 1 IDLLFARLALTTIPEDLDLLDENLLKNLDARCVRSLNGCRVTDEILHLVPNIANFRMTLR 60
Query: 235 TIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPV 294
IKLWAK +YSNVLG+LGGVSWAMLVARICQLYPNA A+TLV KFFL++S+W WPQPV
Sbjct: 61 AIKLWAKNQFVYSNVLGFLGGVSWAMLVARICQLYPNAIAATLVQKFFLIYSKWAWPQPV 120
Query: 295 LLKK-PDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQG 353
LLK+ P L FP+WDPR+N ADR+HLMPIITPAYPQQNSTFNVS+S+RT+MQ+ FK+G
Sbjct: 121 LLKQMPTENKLNFPIWDPRMNPADRFHLMPIITPAYPQQNSTFNVSMSSRTVMQDAFKRG 180
Query: 354 KTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGN 413
+ E+IY+ + W LF NFF KY+HY+VL A S S+E LEW GL+ESK+R LI N
Sbjct: 181 FQVMEEIYSKTSTWKALFAPANFFQKYKHYIVLSAYSNSSEHHLEWEGLVESKIRILIVN 240
Query: 414 LERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGL 473
LERN + LAHVNP+ Y P + +E SG S WFIGL
Sbjct: 241 LERNQFVKLAHVNPKSY------------DPILKSE-------------SGTVSRWFIGL 275
Query: 474 DFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHM 529
+F NV +++T +IQ+FT+ VH QA Q + ++GM+ E RHVKKKQLS YLP +
Sbjct: 276 EFQKPEGTKNVKVDITAEIQYFTSTVHKQACQIAIFREGMRTEARHVKKKQLSNYLPNTV 335
Query: 530 LKKDKKTKSGDQ 541
L+ KK+ Q
Sbjct: 336 LRLKKKSSLNGQ 347
>gi|297605720|ref|NP_001057507.2| Os06g0319600 [Oryza sativa Japonica Group]
gi|255676996|dbj|BAF19421.2| Os06g0319600, partial [Oryza sativa Japonica Group]
Length = 769
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/587 (39%), Positives = 335/587 (57%), Gaps = 45/587 (7%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++LS P + D+ RT+E+ +CL + E+ EE SR EVL KL+ +VK WIK+ +
Sbjct: 33 GVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKAT 92
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF-SSFFEKLKT 148
A ++ KI+TFGSYRLGVH GADID LCV PRH R +YF + ++ L
Sbjct: 93 RASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVD 152
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EVT+L V +A VPV+K +G+ ID+L+A L IP+D+DL D +L N+D++ VR
Sbjct: 153 MPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVR 212
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD+ILRLVPNI FR LR ++ WAK+ G+YSNV+G+LGG++WA+LVARICQL
Sbjct: 213 SLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQL 272
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA+ S L+ +FF V+S+WKWP PV+L + +LG VWDPR N DR H MPIITPA
Sbjct: 273 YPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPA 332
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVSISTR +M +EF + I + I K WD LFE FF YR+YL +
Sbjct: 333 YPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEI 392
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLER-NPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
++ + +D W G +ES++R L+ +ER + L+H NP + D++
Sbjct: 393 TARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSS------------- 439
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGL-DFIAANVILNLTYDIQHFTNAVHWQATQSKMMK 506
+ +F+GL + YDI+ N + +
Sbjct: 440 ---------------RPLHCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWR 484
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRLD 566
+GM+IEV HVK+K + ++ ++ + +++ + A R + A + +++ P +
Sbjct: 485 EGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVGKEARAVSRSNISA--NVQERNVPSMA 542
Query: 567 SDSNSLSDKVNNI------------SNNGDQSSSECTEDNSLSQVYG 601
S +VN I NN SS C E + Y
Sbjct: 543 QPMPYKSSEVNKIPSDPHGGYQSQERNNAVVSSLPCEETGHMFNGYA 589
>gi|392587022|gb|EIW76357.1| Poly(A) polymerase [Coniophora puteana RWD-64-598 SS2]
Length = 629
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/552 (41%), Positives = 335/552 (60%), Gaps = 22/552 (3%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + + + + T+ L E L+ E EE +R VL ++ VK+++++VS
Sbjct: 9 GVTLPISTADSSDREKELTKTLMEELRRQGTFENVEESRTRELVLGRVAAAVKKFVRQVS 68
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+++ + + A GGKI+TFGSYRLGVH G+DID LCV P+HV R D+F +F L+ V
Sbjct: 69 LSRGLSESAATAAGGKIFTFGSYRLGVHGAGSDIDTLCVVPKHVLREDFFETFEPILREV 128
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+ +++ V EA+VP+IK GI +D L ARLAL IPDD+ L+DD LL+NLD++C+RS
Sbjct: 129 EGASEVSGVPEAYVPIIKAKISGIPLDFLMARLALSSIPDDLTLQDDNLLRNLDERCIRS 188
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
L G RV DEILRLVPN+E +R +LR IKLWA++ IYSNV G+LGGV+WA+LVARICQLY
Sbjct: 189 LGGSRVNDEILRLVPNVEVYRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAILVARICQLY 248
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNA A +V +FF++ QW WPQPVLLK+ + L VW+P++ DR H MPIITPAY
Sbjct: 249 PNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPAY 308
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P ST NV+ ST+ I+ EEFK+G I + + G W LF +FF KYR+YL +IAS
Sbjct: 309 PAMCSTHNVTQSTQMIVTEEFKKGADIVDKVIVGSATWADLFRKHDFFHKYRYYLQVIAS 368
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH-----VNPECYTDTTGVIANGSGS- 443
+ + E Q++W G +ES++R L+ LE + LAH + C+ T I + +
Sbjct: 369 TDNTETQIKWAGTVESRLRQLVMKLEYVDSLILAHPFIKGFDQVCHCSTEDEIRSVACGE 428
Query: 444 -PEITAEGKEEGGENTSPPVSGVASMWFIGLDF------IAANVILNLTYDIQHFTNAVH 496
PE + K E +N + ++ ++IGL+ L+++Y FT V
Sbjct: 429 IPEAVRKRKAEDIKNVEGAQTVYSTAFYIGLEIEPKPAGATGPRKLDISYPTTEFTKLVK 488
Query: 497 -WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALD 555
W+ K + M I VRH+K L +Y+ ++ ++ + +N + K S+ + D
Sbjct: 489 MWE----KYNETTMGIYVRHMKSTSLPDYVFDEGERQPRQNRKRPKNNAGK--SSNASPD 542
Query: 556 ELGDKSRPRLDS 567
G RPR +S
Sbjct: 543 --GPNKRPRPES 552
>gi|341895379|gb|EGT51314.1| hypothetical protein CAEBREN_01393 [Caenorhabditis brenneri]
Length = 1333
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/545 (41%), Positives = 328/545 (60%), Gaps = 44/545 (8%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG++ ++L+ P DL T L + LK E EE + R++VL LN VK+WI+ +
Sbjct: 821 YGVSQPISLAQPTPKDLSLTCSLLQELKSVGSFEAKEETTKRIQVLQFLNATVKKWIQGI 880
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S A+ +P + GG++ +FGSYRLGVH G DID++ +APR V R D+F+S + L
Sbjct: 881 SSAR-LPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRTDFFTSLKDILLR 939
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
V +L AVE+AFVP++ F G+++D+LFARL L IP+ +DL DD LLKN+DQ+ VR
Sbjct: 940 NPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVR 999
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RV +++L+LVPN E+F + LR IK+WAK HG+YSN +G+ GG++WA+LVAR CQL
Sbjct: 1000 SLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQL 1059
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLL-----KKPDNVNLGFPVWDPRVNVADRYHLMP 323
YPNA S LV K F VFS W +P P++L ++PD + L W N ADR+HLMP
Sbjct: 1060 YPNATPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWGR--NHADRFHLMP 1117
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHY 383
IITPA+P+QNST NVS ST ++++E I D++ GK W LFE NF+++Y+H+
Sbjct: 1118 IITPAFPEQNSTHNVSRSTMEVIKKEMADALIICNDVFEGKCDWKFLFEEVNFYSQYKHF 1177
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGS 443
+V+ + E + + G +ES++R L+G ERN I LAH+NP+
Sbjct: 1178 VVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPK--------------- 1222
Query: 444 PEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSK 503
P S S+WFIGL+F ++LT +I +F ++ QA Q
Sbjct: 1223 --------------KCQPTSKSQSLWFIGLEFDEVVKNMDLTREIDNFKWNLNVQAKQIA 1268
Query: 504 MMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK------KTKSGDQNTSAKKRKSDQALDEL 557
+D +++++ +VK+ QL +YLPA LKK + + +N KRK D + +
Sbjct: 1269 GFED-VELDISYVKRSQLIKYLPAAELKKGRFFVAKGSAEDNKENAGGLKRKCDNPMSSV 1327
Query: 558 GDKSR 562
K +
Sbjct: 1328 VSKKQ 1332
>gi|55726267|emb|CAH89905.1| hypothetical protein [Pongo abelii]
Length = 304
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/296 (70%), Positives = 250/296 (84%), Gaps = 1/296 (0%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRVLILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRV 313
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRV
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRV 304
>gi|148910690|gb|ABR18412.1| unknown [Picea sitchensis]
Length = 712
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/523 (42%), Positives = 315/523 (60%), Gaps = 32/523 (6%)
Query: 19 GKPQSQAPVTY-GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G+ +Q+ Y G+T ++L P++ D +T EL + L + E+ EE R EVL +L
Sbjct: 5 GQTATQSNGQYLGVTEPISLGGPSEFDYIKTAELEKFLVSAGLYESQEEAVRREEVLGRL 64
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA- 136
+ +VK W++++S K V ++ KI+TFGSYRLGVH GADID LCV PRH R
Sbjct: 65 DQIVKVWVRKISRNKGFGEQVVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREE 124
Query: 137 DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDD 196
D+F +E L + EVT+L V +A VPV+K F+GI ID+L+A+L+L IP+D+D+ D
Sbjct: 125 DFFIELYEMLADMPEVTELHPVPDAHVPVMKFKFNGISIDLLYAKLSLWVIPEDLDISQD 184
Query: 197 MLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
+L+N D++ VRSLNGCRVTD+ILRLVPNI+NFR LR +KLWAK+ G+YSNV G+LGGV
Sbjct: 185 SILRNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMKLWAKRRGVYSNVAGFLGGV 244
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA 316
+WA+LVARICQLYPNA S LVC+FF V++QW+WP PV+L + LG PVWDPR N
Sbjct: 245 NWALLVARICQLYPNALPSMLVCRFFRVYTQWRWPNPVMLCAIEEGPLGLPVWDPRKNPR 304
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DR H MPIITPAYP NS++NVS ST +M EEF++ I E++ K W+ LFET F
Sbjct: 305 DRLHQMPIITPAYPCMNSSYNVSSSTLRVMTEEFQRSNQICEELELNKVCWNILFETYPF 364
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTG 435
F Y++YL + S+ A+D +W G ES++R L +ER L H +P+ ++D
Sbjct: 365 FEAYKNYLEIDISAEGADDLRKWKGWTESRLRLLTLKIERQTFGMLQCHPHPDDFSD--- 421
Query: 436 VIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVIL-NLTYDIQHFTNA 494
P +F+GL I +DI+ +
Sbjct: 422 -------------------------PQRPYHCCFFMGLQRKQGMPIQEGEQFDIRVTVDE 456
Query: 495 VHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK 537
+ K GM+I V H++++ + ++ ++ + TK
Sbjct: 457 FRHSVKMYTLWKQGMEINVSHIRRRNIPLFVFPGGVRPPRTTK 499
>gi|359490984|ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 757
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/587 (39%), Positives = 338/587 (57%), Gaps = 33/587 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++L PN+LD+ +T+EL + L + E+ EE SR EVL +L+ +VK W+K +S
Sbjct: 17 GITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVKAIS 76
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKT 148
AK + + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F + L
Sbjct: 77 RAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSE 136
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EVT+L V +A VPV++ F G+ ID+L+A+L+L IP+D+D+ D +L+N D++ VR
Sbjct: 137 MPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVR 196
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD+ILRLVPNI+NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVARICQL
Sbjct: 197 SLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 256
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA S LV +FF V++QW+WP PV+L + LG VWDPR DR+HLMPIITPA
Sbjct: 257 YPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPA 316
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVS ST IM EEFK+G ISE + K W L E FF Y++YL +
Sbjct: 317 YPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEI 376
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEIT 447
++ +A+D +W G +ES++R L +ER+ + L H +P ++D +
Sbjct: 377 AAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS------------- 423
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFI-AANVILNLTYDIQHFTNAVHWQATQSKMMK 506
+F+GL +DI+ + + K
Sbjct: 424 ---------------RPFHCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWK 468
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK-SGDQNTSAKKRKSDQALDELGDKSRPRL 565
GM+I V HV+++ + ++ ++ + TK + ++ + S QA+ E + S+ R
Sbjct: 469 PGMEIHVIHVRRRNIPNFVFPGGVRPSRPTKVASERRRVLEPNVSTQAVLEGAEDSKKRK 528
Query: 566 DSDSNSLSDKVNNISNNGDQSSS-ECTEDNSLSQVYGLNDSVADSID 611
D N ++ N SSS E N L DS+D
Sbjct: 529 REDENVETNSRNAKCLVAAASSSHEVLSSNPLVSTVNACSIKVDSMD 575
>gi|343427736|emb|CBQ71262.1| probable PAP1-poly(A) polymerase [Sporisorium reilianum SRZ2]
Length = 658
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/574 (42%), Positives = 331/574 (57%), Gaps = 52/574 (9%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T + + P +++ T+ L L+ V E+DEE R +L KL+ +VK+++ VS
Sbjct: 21 GVTPPIATNGPTPREIEVTKTLVAELEKQGVFESDEESKVREVILGKLDAMVKDFVYRVS 80
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
IA + ++A GGKI+TFGSYRLGVH G+DID LCV P+HV R D+FS F LK
Sbjct: 81 IASGMSESLARAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQREDFFSVFEGMLKER 140
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+EVT++ V A VP+I F G++ID FARL+L + D + L DD LL+NLD++ VRS
Sbjct: 141 EEVTEVAGVPTAHVPLIAAKFMGVDIDFTFARLSLPRVEDSLSLEDDNLLRNLDERDVRS 200
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
L G RVTD ILRLVPNI FR+ALR IKLWA++ IYSNV+G+LGGV+WAML ARICQLY
Sbjct: 201 LGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTARICQLY 260
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PN AA +V +FF++ QWKWPQPVLL + ++ L VW+P++ +DR H MPIITPAY
Sbjct: 261 PNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAY 320
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P +T NVS ST+ +M EFK+ + + + GKT W +LF +FF KY++YL +IAS
Sbjct: 321 PGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTHWSELFAKHDFFFKYKYYLQVIAS 380
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH-------VNPECYTD-TTGVIANGS 441
S SA+ QL+W G +ESK+R L+ LE P I AH EC+ D ++A G
Sbjct: 381 SGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECWNDHEVRMVATGE 440
Query: 442 GSPEITAEGKEEGG--------------------ENTSPPVSGVASMWFIGLDF---IAA 478
P+ A+ ++ G E +M++IGL +A
Sbjct: 441 -VPDAVAQRTQKLGALPATDSAQQAAADEAAKVAEGKEGHRMIYTTMFYIGLSIEPKLAG 499
Query: 479 N--VILNLTYDIQHFTNAV-HWQATQSKMMKDGMKIEVRHVKKKQLSEYL---------- 525
L+++Y FT V W + + M I VRH+K QL Y+
Sbjct: 500 EGPRKLDISYPTAEFTGKVKQW----DQYDEASMGIVVRHIKWTQLPAYVFEGGENRVAA 555
Query: 526 PAHMLKKDKKTKSGDQNTSAKKRKSDQA---LDE 556
A K+ KSG + + QA LDE
Sbjct: 556 AAAGKVNGKRAKSGKKKNGTGAEGAGQANGSLDE 589
>gi|388857257|emb|CCF49099.1| probable PAP1-poly(A) polymerase [Ustilago hordei]
Length = 672
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/564 (42%), Positives = 326/564 (57%), Gaps = 47/564 (8%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T + + P +++ T+ L L+ V E+DEE R +L KL+ +VK+++ VS
Sbjct: 21 GVTPPIAANGPTPREIEVTKTLVAELEKQGVFESDEESKVREVILGKLDAMVKDFVYRVS 80
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
IA + ++A GGKI+TFGSYRLGVH G+DID LCV P+HV R D+FS F LK
Sbjct: 81 IANGMSESLARSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQREDFFSVFETMLKER 140
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+EVT++ V A VP+I F G++ID FARL+L + D + L DD LL+NLD++ VRS
Sbjct: 141 EEVTEVAGVPTAHVPLIASKFMGVDIDFTFARLSLSRVEDSLSLEDDNLLRNLDERDVRS 200
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
L G RVTD ILRLVPNI FR+ALR IKLWA++ IYSNV+G+LGGV+WAML ARICQLY
Sbjct: 201 LGGSRVTDGILRLVPNIHVFRMALRCIKLWAQQRAIYSNVMGFLGGVAWAMLTARICQLY 260
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PN AA +V +FF++F QWKWPQPVLL ++ L VW+P++ +DR H MPIITPAY
Sbjct: 261 PNEAAGAIVSRFFIIFYQWKWPQPVLLTPIEDGPLSVRVWNPKLYPSDRLHRMPIITPAY 320
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P +T NVS ST+ +M EFK+ + + + GKT W +LF +FF KY++YL +IAS
Sbjct: 321 PGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWCELFAKHDFFFKYKYYLQVIAS 380
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH-------VNPECYTDTTGVIANGSG 442
S SA+ QL+W G +ESK+R L+ LE P I AH EC+ D +
Sbjct: 381 SGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECHNDHEVRLVATGD 440
Query: 443 SPEITAEGKE-----------------------EGGENTSPPVSGVASMWFIGLDF---I 476
PE A+ + EG E + + ++IGL +
Sbjct: 441 IPEQVAQRTQKVAALPETEEAKKAAEEEAAKITEGKEGHRMIYT---TTFYIGLSIEPKL 497
Query: 477 AAN--VILNLTYDIQHFTNAV-HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKD 533
A L+++Y FT V W+ + + M I VRH+K QL Y+ +
Sbjct: 498 AGEGPRKLDISYPTAEFTGKVKQWE----QYDEASMGIVVRHIKWTQLPGYVFEGGENRV 553
Query: 534 KKTKSGDQN----TSAKKRKSDQA 553
+G N S KKR D A
Sbjct: 554 TAAAAGKVNGKRTKSGKKRNGDSA 577
>gi|341899970|gb|EGT55905.1| hypothetical protein CAEBREN_16296 [Caenorhabditis brenneri]
Length = 526
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/551 (41%), Positives = 331/551 (60%), Gaps = 44/551 (7%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P + YG++ ++L+ P DL T L + LK + E EE + R++VL LN
Sbjct: 6 PAATTTKIYGVSQPISLANPTPQDLSLTCSLLQELKSFGSFEAKEETTKRIQVLQFLNVT 65
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFS 140
VK+WI+ +S A+ +P + GG++ +FGSYRLGVH G DID++ +APR V R D+F+
Sbjct: 66 VKKWIQGISAAR-LPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVTRTDFFT 124
Query: 141 SFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLK 200
S + L V +L AVE+AFVP++ F G+++D+LFARL L IPD +DL DD LLK
Sbjct: 125 SLKDILIRNPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLK 184
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
N+DQK VRSLNG RV +++L+LVPN E+F + LR IK+WAK HG+YSN +G+ GG++WA+
Sbjct: 185 NMDQKSVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAI 244
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKP-----DNVNLGFPVWDPRVNV 315
LVAR CQLYPNA+ S LV K F VFS W +P P++L P D + L W N
Sbjct: 245 LVARTCQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERSDMLALDNLCWGR--NH 302
Query: 316 ADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPN 375
ADR+HLMPIITPA+P+QNST NVS ST ++++E I DI+ GK+ W LFE N
Sbjct: 303 ADRFHLMPIITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDIFEGKSDWKFLFEEVN 362
Query: 376 FFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTG 435
F+++Y+H++V+ + E + + G +ES++R L+G ERN I LAH+NP+
Sbjct: 363 FYSQYKHFVVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPK------- 415
Query: 436 VIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAV 495
P S S+WFIGL+F ++LT +I +F +
Sbjct: 416 ----------------------KCQPTSKAQSIWFIGLEFDEVVKNMDLTREIDNFKWNL 453
Query: 496 HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK----KTKSGD--QNTSAKKRK 549
+ QA Q ++ +++++ +VK+ QL +YLPA LKK + K S D +N KRK
Sbjct: 454 NVQAKQIAGFEE-VELDISYVKRSQLIKYLPAAELKKGRFFVAKGSSEDNKENAGGLKRK 512
Query: 550 SDQALDELGDK 560
+ + K
Sbjct: 513 CGDPMASVASK 523
>gi|1377872|gb|AAC52609.1| poly(A) polymerase V, partial [Mus musculus]
Length = 303
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/287 (72%), Positives = 247/287 (86%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KLNNLVKEWI+E+
Sbjct: 6 YGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREI 65
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+F+SF++KLK
Sbjct: 66 SESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKL 125
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+R
Sbjct: 126 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 185
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 186 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 245
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
YPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRV+V
Sbjct: 246 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSV 292
>gi|170090568|ref|XP_001876506.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647999|gb|EDR12242.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 600
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/515 (45%), Positives = 318/515 (61%), Gaps = 26/515 (5%)
Query: 26 PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
P G+T ++ N+ + + T L E L+ N ET+EE +R VL ++ LVK+++
Sbjct: 23 PSYLGVTPPISTMESNEREKEVTMTLMEELRRQNTFETEEEARTREIVLGRVAALVKKFV 82
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
++VSIAK + A GGKI+TFGSYRLGVH G+DID LCV P+HV R D+F F
Sbjct: 83 RQVSIAKGLSEQAANLAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSREDFFEVFEPM 142
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
LK ++ VT++ V EA+VP++K GI +D L ARLAL IPDD+ L+DD LL+NLD++
Sbjct: 143 LKDLEGVTEVSGVPEAYVPIVKTKISGIPLDFLMARLALSSIPDDLSLQDDNLLRNLDER 202
Query: 206 CVRSLN--GCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVA 263
CVRSL G RV DEILRLVPN++ FR ALR IKLWA++ IYSNV G+LGGV+WA+LVA
Sbjct: 203 CVRSLGATGSRVIDEILRLVPNVQVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWALLVA 262
Query: 264 RICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMP 323
RICQLYPNA A +V +FF++ QW WPQPVLLK+ ++ L VW+P++ ADR H MP
Sbjct: 263 RICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRSHRMP 322
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHY 383
IITPAYP ST NV+ ST+ IM EEFK+G I + + G W +LF +FF KYR+Y
Sbjct: 323 IITPAYPAMCSTHNVTASTQIIMTEEFKRGADIVDKVIVGSATWSELFAKHDFFHKYRYY 382
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH--------VNPECYTDTTG 435
L +IAS+ +A+ Q++W G +ES++R L+ LE + LAH V+ D
Sbjct: 383 LQVIASTGNADLQIKWSGTVESRIRQLVMKLEYVDSLILAHPFIRGFEQVSYCLSEDEVR 442
Query: 436 VIANGSGSPEITAEGKE--EGGENTSPPVSGVASMWFIGLDF------IAANVILNLTYD 487
+A G S + KE EG E P S + ++IGL L+++Y
Sbjct: 443 AVAEGEISDSVAGRKKEDIEGKEGAGPVYS---TTFYIGLAIEPKPTGATGPRRLDISYP 499
Query: 488 IQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQL 521
FT V W+ K + M I VRH+K L
Sbjct: 500 TTDFTKLVKMWE----KYDEATMGIVVRHIKSSGL 530
>gi|443899034|dbj|GAC76367.1| poly(a) polymerase and related nucleotidyltransferases [Pseudozyma
antarctica T-34]
Length = 672
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/417 (50%), Positives = 279/417 (66%), Gaps = 4/417 (0%)
Query: 8 NSMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEEL 67
S +P G P T G+T + + P +++ TR L L+ V E+DEE
Sbjct: 3 TSASAVEPALGGGPTR----TLGVTPPIATNGPTPREIEVTRTLVAELERQRVFESDEES 58
Query: 68 SSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALC 127
R +L KL+ +VK+++ VSIA + ++A GGKI+TFGSYRLGVH G+DID LC
Sbjct: 59 KVREVILGKLDAMVKDFVYRVSIAHGMSESLARAAGGKIFTFGSYRLGVHGPGSDIDTLC 118
Query: 128 VAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI 187
V P+HV R D+FS F LK +EVT++ V A VP+I F G++ID FARLAL +
Sbjct: 119 VVPKHVQREDFFSVFEGMLKEREEVTEVAGVPTAHVPLIASKFMGVDIDFTFARLALPRV 178
Query: 188 PDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYS 247
D++ L DD LL++LD++ VRSL G RVTD ILRLVPNI FR+ALR IKLWA++ IYS
Sbjct: 179 EDNLSLEDDNLLRSLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYS 238
Query: 248 NVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP 307
NV+G+LGGV+WAML ARICQLYPN AA +V +FF++F QWKWPQPVLL + ++ L
Sbjct: 239 NVMGFLGGVAWAMLTARICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTQIEDGPLSVR 298
Query: 308 VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMW 367
VW+P++ +DR H MPIITPAYP +T NVS ST+ +M EFK+ + + + GKT W
Sbjct: 299 VWNPKLYPSDRLHRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTDW 358
Query: 368 DKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+LF +F+ KY++YL +IASS SA+ QL+W G +ESK+R L+ LE P I AH
Sbjct: 359 SELFAKHDFYFKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLELVPTITCAH 415
>gi|170036999|ref|XP_001846348.1| poly a polymerase [Culex quinquefasciatus]
gi|167879976|gb|EDS43359.1| poly a polymerase [Culex quinquefasciatus]
Length = 531
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/347 (61%), Positives = 251/347 (72%), Gaps = 23/347 (6%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
GMT+A++L+ P D +T EL + +PYNV E + +L+ RME+LSKL LVK+W++ VS
Sbjct: 2 GMTSAISLAEPKTEDHTKTVELQKAFEPYNVFEDEPKLNHRMEILSKLKTLVKQWVRNVS 61
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
I+KN+P +AEK+GGKIYTFGSYRL V+HKG +IDALC APR+++R DYF SFFE LK
Sbjct: 62 ISKNMPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCEAPRNIERQDYFGSFFELLKKQ 121
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
EVT RAVEEA VPVI MNFDGI+ID+LFARLALKEIPD+ DLR+DMLLKNLD K V
Sbjct: 122 PEVTGCRAVEEALVPVINMNFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLVER 181
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
+ R P E HGIYSN LGY GGVSW MLVAR CQL
Sbjct: 182 VPRHRRD-------PTAE---------------HGIYSNSLGYFGGVSWGMLVARTCQL- 218
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PN A+T V KFFLVF +WKWPQPV LK+PD VNLGF VWD RVNV DR+HLM IITPAY
Sbjct: 219 PNVIAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAY 278
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
PQQNSTF+VS STR +M EF I+++I GK WDKLFE P++
Sbjct: 279 PQQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKAGWDKLFEAPSW 325
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 28/32 (87%)
Query: 506 KDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK 537
+DGMKIE RHV++KQL++YL ++LK+++K +
Sbjct: 359 RDGMKIEARHVRRKQLNKYLDPNLLKRERKNQ 390
>gi|449461393|ref|XP_004148426.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 863
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/553 (41%), Positives = 318/553 (57%), Gaps = 46/553 (8%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G P PVT YG+T ++L+ P D+ R EL + L + E+ EE + R EVL ++
Sbjct: 9 GLPSVSHPVTNYGVTKPISLAGPMDADIHRNIELEKFLVDSELYESKEEAAKREEVLGRI 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
+ +VK W+K++++ + + E I+TFGSYRLGVH G+DID LCV P +V+R D
Sbjct: 69 DQIVKSWVKQLTLLRGYTEQMVEDANAVIFTFGSYRLGVHGPGSDIDTLCVGPSYVNRED 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F L ++EVTDL+ V +A VPV++ F GI ID+L+A ++L +P+D+D+
Sbjct: 129 FFIILHNILAEMEEVTDLQPVPDAHVPVMRFKFLGISIDLLYASISLLVVPEDLDISHGS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+L N+D++ VRSLNGCRV D+ILRLVPN+E+FR LR +K WAK+ G+YSNV G+LGGV+
Sbjct: 189 VLYNVDEQTVRSLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVN 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WA+LVA++CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWDPR N D
Sbjct: 249 WALLVAQVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
R+HLMPIITPAYP NS++NVS ST +M E+F+ G +I E+I K W LFE FF
Sbjct: 309 RFHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGV 436
Y++YL + + A+D L W G +ES+ R L +ER+ L H P Y+D
Sbjct: 369 ETYKNYLQVDIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSD---- 424
Query: 437 IANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAA-NVILNLTYDIQHFTNAV 495
TS P S A +F+GL +DI+ +
Sbjct: 425 ---------------------TSKPCSHCA--FFMGLQRKEGLRGQGGQQFDIRGTVDEF 461
Query: 496 HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNT------------ 543
+ K GM I V HV++KQL ++ K+ K + Q
Sbjct: 462 RQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHKRAKPLRHEGQQVDTVCADMLQDQS 521
Query: 544 ----SAKKRKSDQ 552
KKRKSD
Sbjct: 522 GITEKGKKRKSDH 534
>gi|449439435|ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 748
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/556 (40%), Positives = 337/556 (60%), Gaps = 41/556 (7%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++LS P + D+ +TREL + L+ + E+ E+ +R EVL +L+ +VK W+K +S
Sbjct: 17 GITDPISLSGPTEYDVLKTRELEKYLQDAGLYESQEDAVNREEVLGRLDQIVKIWVKAIS 76
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKT 148
AK + + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F + L
Sbjct: 77 RAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSE 136
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EV++L V +A VPV++ G+ ID+L+A+L+L IP+D+D+ D +L+N D++ VR
Sbjct: 137 MPEVSELHPVPDAHVPVMRFKLSGVSIDLLYAKLSLWVIPEDLDISQDSILQNTDEQTVR 196
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD ILRLVPNI++FR LR ++ WAK+ G+YSNV G+LGG++WA+LVARICQL
Sbjct: 197 SLNGCRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQL 256
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA + LV +FF VF+QW+WP PV+L + +LG VWDPR N DRYHLMPIITPA
Sbjct: 257 YPNALPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPRRNPKDRYHLMPIITPA 316
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVS ST IM EEF++G I E + K+ WD LFE FF Y++YL +
Sbjct: 317 YPCMNSSYNVSASTLRIMTEEFRRGHDICEVMEENKSDWDTLFEPYPFFEAYKNYLQIDI 376
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEIT 447
++ + +D W G +ES++R L +ER+ + L H P ++D + +
Sbjct: 377 TAENDDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFSDKSRPFHHCY----FM 432
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKD 507
+++GG P SG G F ++ + F ++V+ + K
Sbjct: 433 GLQRKQGG-----PASG-------GEQF-------DIRLTVDEFKHSVNVYTQR----KR 469
Query: 508 GMKIEVRHVKKKQLSEYL------PAHM------LKKDKKTKSGDQNTSAKKRKSDQALD 555
GM+I V HVK++ + ++ P+ +++ + K+ D ++ ++LD
Sbjct: 470 GMEIYVSHVKRRSIPNFVFPGGVRPSRASKLTWDIRRSSELKASDSTQVDSPSEATESLD 529
Query: 556 ELGDKSRPRLDSDSNS 571
+ R R+D ++N+
Sbjct: 530 GDDRRKRIRIDDNANT 545
>gi|357138719|ref|XP_003570937.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 760
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/538 (41%), Positives = 315/538 (58%), Gaps = 34/538 (6%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G++ ++LS P + D+ +T E+ + L + E+ EE SR EVL KL+ VK WIK+ +
Sbjct: 31 GVSEPISLSGPTEKDVMQTTEVEKFLADAGLYESQEEAVSREEVLGKLDQTVKTWIKKAT 90
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF-SSFFEKLKT 148
A ++ KI+TFGSYRLGVH GADID LCV PRH R DYF + L
Sbjct: 91 RASGYGEQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFFRCLHDMLAE 150
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EV++L V +A VPV+ G+ ID+L+A LA IP+D+DL D +L N+D++ VR
Sbjct: 151 MPEVSELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPEDLDLSQDSILHNVDEQAVR 210
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD+ILRLVPNI +FR LR ++ W K+ G+YSNV+G+LGG++WA+LVARICQL
Sbjct: 211 SLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWAILVARICQL 270
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA+ S L+ +FF V+SQWKWP PV L + LG PVWDPR N DR H MPIITPA
Sbjct: 271 YPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPA 330
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVS+STR +M +EF +G I + I + WD LFE FF YR+YL ++
Sbjct: 331 YPCMNSSYNVSVSTRYVMVQEFTRGYEICQAIDENRATWDDLFEPYPFFELYRNYLEVVI 390
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIANGSGSPEIT 447
S+ + +D W G +ES++R L+ ER H + LAH +P ++D +
Sbjct: 391 SARNEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGS------------- 437
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLT--YDIQHFTNAVHWQATQSKMM 505
+ S +F+GL + V +DI+ N
Sbjct: 438 ---------------RPLHSFYFMGL-WRKQTVQPQEAEQFDIRGIVNEFKSSVCAYAHR 481
Query: 506 KDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRP 563
+GM IEV HVK+K + ++ ++ + +++ +N A R +D + D G P
Sbjct: 482 GEGMDIEVSHVKRKDIPLFVFPGGVRPPRSSRTAGRNGHAVSR-NDVSADADGQVGNP 538
>gi|224135441|ref|XP_002322074.1| predicted protein [Populus trichocarpa]
gi|222869070|gb|EEF06201.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/530 (41%), Positives = 322/530 (60%), Gaps = 45/530 (8%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++L P + D+ +TREL + L+ + E+ EE SR EVL +L+ +VK W+K +S
Sbjct: 8 GITEPISLGGPTEYDVTKTRELEKFLQDAGLYESQEEAVSREEVLGRLDQIVKNWVKVIS 67
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKT 148
AK + + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F L
Sbjct: 68 RAKRLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRMLSE 127
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EVT+L V +A VPV++ F G+ ID+L+A+L+L IP+D+D+ D +L N D++ VR
Sbjct: 128 MPEVTELHPVPDAHVPVMRFKFKGVSIDLLYAKLSLWVIPEDLDVSQDSMLHNADEQTVR 187
Query: 209 SLNGCRVTDEILRLVPNIE---NFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
SLNGCRVTD+ILRLVPNI+ NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVARI
Sbjct: 188 SLNGCRVTDQILRLVPNIQAMQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARI 247
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQL+PNA + LV +FF V++QW+WP PV+L + +LG VWDPR N DRYHLMPII
Sbjct: 248 CQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPII 307
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYP NS++NVS ST IM EEF++G I E + K WD LFE +FF Y++YL
Sbjct: 308 TPAYPSMNSSYNVSSSTLRIMTEEFQRGNEICEAMEVSKAEWDTLFEPFSFFEAYKNYLQ 367
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSP 444
+ S+ + +D +W G +ES++R L +ER+ + L H +P ++D +
Sbjct: 368 IDISAENEDDLRQWKGWVESRLRQLTLKIERHTYNMLQCHPHPGEFSDKS---------- 417
Query: 445 EITAEGKEEGGENTSPPVSGVASMWFIGLDF-----IAANVILNLTYDIQHFTNAVHWQA 499
+ +F+GL + ++ + F N+V+
Sbjct: 418 ------------------RPLHCSYFMGLQRKQGVPVNEGEQFDIRITVDEFKNSVN--- 456
Query: 500 TQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKS---GDQNTSAK 546
+ K GM+I V HVKK+ + ++ ++ + +K+ G +++ AK
Sbjct: 457 -MYTLWKPGMEIRVTHVKKRNIPNFVFPSGVRPSRPSKATWDGRRSSEAK 505
>gi|297734259|emb|CBI15506.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/407 (49%), Positives = 280/407 (68%), Gaps = 2/407 (0%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++L PN+LD+ +T+EL + L + E+ EE SR EVL +L+ +VK W+K +S
Sbjct: 17 GITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVKAIS 76
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKT 148
AK + + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F + L
Sbjct: 77 RAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSE 136
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EVT+L V +A VPV++ F G+ ID+L+A+L+L IP+D+D+ D +L+N D++ VR
Sbjct: 137 MPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVR 196
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD+ILRLVPNI+NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVARICQL
Sbjct: 197 SLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 256
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA S LV +FF V++QW+WP PV+L + LG VWDPR DR+HLMPIITPA
Sbjct: 257 YPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPA 316
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVS ST IM EEFK+G ISE + K W L E FF Y++YL +
Sbjct: 317 YPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEI 376
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTT 434
++ +A+D +W G +ES++R L +ER+ + L H +P ++D +
Sbjct: 377 AAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 423
>gi|356531174|ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/523 (41%), Positives = 314/523 (60%), Gaps = 31/523 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++L+ P + D+ +TREL + L+ + E+ EE R EVL +L+ +VK W+K +S
Sbjct: 17 GITEPISLAGPTEDDVIKTRELEKYLQGVGLYESQEEAVGREEVLGRLDQIVKIWVKNIS 76
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSSFFEKLKT 148
AK + + KI+TFGSYRLGVH GADID LCV PRH R D+F + L
Sbjct: 77 RAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGELQKMLSE 136
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EVT+L V +A VPV+K F+G+ +D+L+ARLAL IPDD+D+ + +L+N+D++ V
Sbjct: 137 MQEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPDDLDISQESILQNVDEQTVL 196
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD++LRLVPNI+ FR LR ++ WAK+ G+YSNV G+LGG++ A+LVARICQL
Sbjct: 197 SLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQL 256
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA + LV +FF V++QW+WP PV+L + +LG VWDPR N DRYHLMPIITPA
Sbjct: 257 YPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPA 316
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NST+NV+ ST +M +EF++G I E + K WD LFE FF Y++YL +
Sbjct: 317 YPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQIDI 376
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEIT 447
++ +A+D +W G +ES++R L +ER+ + L H +P ++D
Sbjct: 377 TAENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSD--------------- 421
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQATQSKMMK 506
N+ P +F+GL V +DI+ + K
Sbjct: 422 ---------NSRP----FHHCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWK 468
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRK 549
GM I V HVK++ + Y+ ++ +K +N + K +
Sbjct: 469 PGMNIHVSHVKRRNIPNYIFPGGVRPTFPSKVTAENKQSSKSR 511
>gi|302804859|ref|XP_002984181.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
Length = 496
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/511 (43%), Positives = 305/511 (59%), Gaps = 38/511 (7%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
QS G+T ++ + P + D RTR+L + L + E+ EE R EVL +L+ LV
Sbjct: 3 QSNGKKYLGVTEPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQLV 62
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFS 140
KEW+K + + K V ++ KI+TFGSYRLGVH G DID LCV PRHV R D+F
Sbjct: 63 KEWVKNICLRKGYSEQVTQEANAKIFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFG 122
Query: 141 SFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLK 200
F L+ + EVT+L V +A VPV++ F GI ID+L+A LA+ IP+D+D+ + +L+
Sbjct: 123 VFHGMLEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESILR 182
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
NLD+ VRSLNGCRVTD+ILRLVPNIE+FR LR +KLWA+K G+YSNV G+LGGV+WA+
Sbjct: 183 NLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWAL 242
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYH 320
LVARICQLYPNA S LV +FF V++QW+WP PV+L + + +LG VWDPR N DR H
Sbjct: 243 LVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTH 302
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKY 380
MPIITPAYP NS++NVS ST +M EEF + I E I K W LFE FF Y
Sbjct: 303 QMPIITPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAFFDAY 362
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIAN 439
++YL + + +D W G +ES++R L +E++ + L H +P + D
Sbjct: 363 KNYLQIDVFAADNDDLRRWKGWVESRLRQLTLKIEKHTYGMLQCHPHPCDFVD------- 415
Query: 440 GSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAA-----NVILNLTYDIQHFTNA 494
E KE G +F+GL ++ ++ F +
Sbjct: 416 ---------ESKE-----------GKHCAFFMGLQKRQGLPSQEGQQFDIRLTVEEFRQS 455
Query: 495 VHWQATQSKMMKDGMKIEVRHVKKKQLSEYL 525
V T ++ K+GM I V HV+++Q+ Y+
Sbjct: 456 V----TGYQLWKEGMDIAVSHVRRRQIPAYV 482
>gi|357500153|ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago truncatula]
Length = 752
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/615 (38%), Positives = 345/615 (56%), Gaps = 48/615 (7%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
QS G+T ++L+ P + D+ +T EL + L+ + E+ +E R EVL +L+ +V
Sbjct: 9 QSNGKQWLGITEPISLAGPTEEDVTKTHELEKYLQGAGLYESQQEAVGREEVLGRLDQIV 68
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFS 140
K W+K +S AK + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F
Sbjct: 69 KIWVKTISRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFG 128
Query: 141 SFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLK 200
+ L ++EVT+L V +A VPV+K F+G+ +D+L+ARLAL IP+D+D+ + +L+
Sbjct: 129 ELQKMLSEMEEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQ 188
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
N+D++ V SLNGCRVTD++LRLVPNI+NFR LR ++ WAK+ G+YSNV G+LGG++ A+
Sbjct: 189 NVDEQTVLSLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINLAL 248
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYH 320
LV RICQLYPNA + LV +FF V++QW+WP PV+L + +LG VWDPR N DRYH
Sbjct: 249 LVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYH 308
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKY 380
LMPIITPAYP NST+NV+ ST IM +EFK+G I E + K WD LFE FF Y
Sbjct: 309 LMPIITPAYPCMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKADWDTLFEPYPFFEAY 368
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIAN 439
++YL + ++ + +D +W G +ES++R L +E+ + L H P ++D +
Sbjct: 369 KNYLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKS----- 423
Query: 440 GSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQ 498
+F+GL V +DI+
Sbjct: 424 -----------------------RSFHQCYFMGLQRKQGVPVSEGEQFDIRQTVEEFKHN 460
Query: 499 ATQSKMMKDGMKIEVRHVKKKQLSEYL-PAHMLKKDKKTKSGDQNTSAKKRKSDQALDE- 556
K GM I V HVK++ + ++ P + +G+ S+K R + Q+ E
Sbjct: 461 VNAYTAWKPGMDIRVSHVKRRNIPNFIFPGGVRPSVPSRVNGENRRSSKSRVAGQSQSEK 520
Query: 557 --------LG---DKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTED-NSLSQVYGLND 604
LG ++ R RL+ ++NS +V+ S + + ED N S +
Sbjct: 521 SQGGKAVVLGADDERKRKRLEDNNNS---RVSKSSASVSPPNRNVPEDRNPFSATSSCSM 577
Query: 605 SVADSIDNSLDDLSS 619
DS NS+ D S
Sbjct: 578 KFDDSEVNSMGDQKS 592
>gi|302696569|ref|XP_003037963.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
gi|300111660|gb|EFJ03061.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
Length = 649
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/635 (37%), Positives = 359/635 (56%), Gaps = 46/635 (7%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
++ P G+T +++SPP + + T + E L V E+ E+ R L +++ L K
Sbjct: 4 AEQPKYLGITDPISVSPPTEAEEAATVAMMEELHRQGVFESAEDSKRRELALDRISALTK 63
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
+++++V+IA+ + A GGK+YTFGSYRLGVH +DID LCV P+HV R D+F F
Sbjct: 64 KFVQKVTIARGLSEVTARNAGGKVYTFGSYRLGVHTPESDIDTLCVVPKHVSREDFFDVF 123
Query: 143 FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNL 202
L+ +VT++ + EA+VP+IK+ GI ID+L ARLAL IP+D+ L+D +L+NL
Sbjct: 124 EPMLRESPDVTEVAGIPEAYVPIIKIKMFGIPIDILMARLALSSIPEDLSLQDSNILRNL 183
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D +CVRSLNG RVTDE+LRLVPN++ FR ALR IKLWA++ IYSNV G+ GGV+WAMLV
Sbjct: 184 DDRCVRSLNGYRVTDELLRLVPNVDVFRDALRCIKLWAQRKAIYSNVNGFPGGVAWAMLV 243
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR+CQLYPNA A T+V +FF + QW WP PV+LK D++ +G W+P++ DR H M
Sbjct: 244 ARVCQLYPNANAGTVVGRFFPIMHQWPWPAPVILKHVDDLQMGQRSWNPKLFPGDRAHRM 303
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRH 382
P+ITP YP +T NVS+ST I++EE ++G + I G + W +LFE +FF KYR+
Sbjct: 304 PVITPVYPAMCATHNVSVSTFAIIEEELRRGTKLMNSIILGSSKWSELFEKHDFFHKYRY 363
Query: 383 YLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYT--------DTT 434
+L +IAS+ SAE QL W +E+K+R L+ LE + LAH + + D
Sbjct: 364 FLQIIASTASAEAQLMWAPNVEAKIRQLVSKLELVESLTLAHPFTKGFEQVFYCMNDDEI 423
Query: 435 GVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANV------ILNLTYDI 488
+A G P++ A + + E ++ ++IGL V L+++Y
Sbjct: 424 RSVAQGE-VPDVIARRRPQDIEGVESGSKVYSTTFYIGLAIEPRPVGAIGTRRLDISYPT 482
Query: 489 QHFTN-AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKK 547
FT A W+ + + M + VRH+K S LP ++ + ++ Q SA+K
Sbjct: 483 TEFTKVAKMWE----RFDEATMGLVVRHIK----SSALPDYVFEPGER-----QPRSAQK 529
Query: 548 RKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGD-QSSSECTEDNSLS---QVYGLN 603
R ++ + + S P S + + + + + NG + + + S Q Y +N
Sbjct: 530 RVKVRSSYPVNENSYPTNGELSYATNGERSYTNGNGQLHGNGQLPANGQFSSNGQHYPMN 589
Query: 604 DSVADSIDN-------------SLDDLSSTSPHPT 625
V D+ L +S + P+PT
Sbjct: 590 HHVPSVTDHLPLKTSDNGVSPIVLTPVSESGPYPT 624
>gi|225442450|ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/571 (39%), Positives = 327/571 (57%), Gaps = 43/571 (7%)
Query: 10 MQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSS 69
M +SK D P+ Q+ YG+T ++++ P ++D+QR+ EL + L + E+ EE
Sbjct: 1 MVSSKGLGDSPPR-QSVKQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIK 59
Query: 70 RMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVA 129
R EVL +L +VK+W+K+++ + + E ++TFGSYRLGVH G DID LC+
Sbjct: 60 RAEVLDRLGQIVKDWVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIG 119
Query: 130 PRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIP 188
P +V R D+F L ++EVT+L+ V +A VPV+K FDGI ID+L+A ++L +P
Sbjct: 120 PSYVSREEDFFFILHNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVP 179
Query: 189 DDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSN 248
+D+D+ D +L N+D+ VRSLNGCRV D+IL+LVPN+E+F LR +K WAK+ G+YSN
Sbjct: 180 EDLDISDLSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSN 239
Query: 249 VLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPV 308
V G+LGGV+WA+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGF V
Sbjct: 240 VTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSV 299
Query: 309 WDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWD 368
WDPR N DR H MPIITPAYP NS++NVSIST +M E+F+ G I E I W
Sbjct: 300 WDPRKNPRDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWG 359
Query: 369 KLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNP 427
LFE FF Y++YL + +V +D W G +ES++R L +ER+ L H P
Sbjct: 360 ALFEPYLFFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYP 419
Query: 428 ECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVIL-NLTY 486
Y DT+ ++ + +F+GL +I +
Sbjct: 420 HEYVDTSKQCSHCA---------------------------FFMGLQRKQGEIIQEGQQF 452
Query: 487 DIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYL------------PAHMLKKDK 534
DI+ + K GM+I V HV++KQ+ Y+ P + + D+
Sbjct: 453 DIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQRPVNQQQGDE 512
Query: 535 KTKSGDQNTSAKKRKSDQALDELGDKSRPRL 565
++G K++K + +D DK+ RL
Sbjct: 513 ACRTGSSEKHMKRKKDPEEVDVEQDKAAKRL 543
>gi|341895922|gb|EGT51857.1| hypothetical protein CAEBREN_12609 [Caenorhabditis brenneri]
Length = 528
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/545 (40%), Positives = 325/545 (59%), Gaps = 44/545 (8%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG++ ++L+ P DL T L + LK E EE + R++VL LN VK+WI+ +
Sbjct: 16 YGVSQPISLAQPTPKDLSLTCSLLQELKSVGSFEAKEETTKRIQVLQFLNATVKKWIQGI 75
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S A+ +P + GG++ +FGSYRLGVH G DID++ +APR V R D+F+S + L
Sbjct: 76 SSAR-LPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRTDFFTSLKDILIR 134
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
V +L AVE+AFVP++ F G+++D+LFARL L IPD +DL DD LLKN+DQ+ VR
Sbjct: 135 NPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQESVR 194
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RV +++L+LVPN E+F + LR IK+WAK HG+YSN +G+ GG++WA+LVAR CQL
Sbjct: 195 SLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQL 254
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKP-----DNVNLGFPVWDPRVNVADRYHLMP 323
YPNA+ S LV K F VFS W +P P++L P D + L W N ADR+HLMP
Sbjct: 255 YPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERADMLTLDNLCWGR--NHADRFHLMP 312
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHY 383
IITPA+P+QNST NVS ST ++++E I DI++GK W LFE NF+++Y+H+
Sbjct: 313 IITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDIFDGKCDWKFLFEEVNFYSQYKHF 372
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGS 443
+V+ + E + + G +ES+ R LIG ERN I +AH+NP+
Sbjct: 373 VVMKLDAKKEETENSYGGFLESRFRQLIGAFERNRGIKMAHLNPK--------------- 417
Query: 444 PEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSK 503
P S S+WFIGL+F ++LT +I +F ++ QA Q
Sbjct: 418 --------------KCQPTSKAQSLWFIGLEFDDVVKNMDLTREIDNFKWNLNVQAKQIA 463
Query: 504 MMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK------KTKSGDQNTSAKKRKSDQALDEL 557
++ +++++ + K+ QL +Y+P LKK + + +N KRK D + +
Sbjct: 464 GFEE-VELDISYAKRSQLIKYMPPAELKKGRFFVAKGSAEDNKENAGGLKRKCDNPMSSV 522
Query: 558 GDKSR 562
K +
Sbjct: 523 VSKKQ 527
>gi|449515462|ref|XP_004164768.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 544
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/529 (41%), Positives = 314/529 (59%), Gaps = 32/529 (6%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G P PVT YG+T ++L+ P D+ R EL + L + E+ EE + R EVL ++
Sbjct: 9 GLPSVSHPVTNYGVTKPISLAGPMDADIHRNIELEKFLVDSELYESKEEAAKREEVLGRI 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
+ +VK W+K++++ + + E +TFGSYRLGVH G+DID LCV P +V+R D
Sbjct: 69 DQIVKSWVKQLTLLRGYTEQMVEDANAVXFTFGSYRLGVHGPGSDIDTLCVGPSYVNRED 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F L ++EVTDL+ V +A VPV++ F GI ID+L+A ++L +P+D+D+
Sbjct: 129 FFIILHNILAEMEEVTDLQPVPDAHVPVMRFKFLGISIDLLYASISLLVVPEDLDISHGS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+L N+D++ VRSLNGCRV D+ILRLVPN+E+FR LR +K WAK+ G+YSNV G+LGGV+
Sbjct: 189 VLYNVDEQTVRSLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVN 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WA+LVA++CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWDPR N D
Sbjct: 249 WALLVAQVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
R+HLMPIITPAYP NS++NVS ST +M E+F+ G +I E+I K W LFE FF
Sbjct: 309 RFHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGV 436
Y++YL + + A+D L W G +ES+ R L +ER+ L H P Y+DT+
Sbjct: 369 ETYKNYLQVDIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKP 428
Query: 437 IANGSGSPEIT-AEG-KEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNA 494
++ + + EG + +GG+ +DI+ +
Sbjct: 429 CSHCAFFMGLQRKEGLRGQGGQQ----------------------------FDIRGTVDE 460
Query: 495 VHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNT 543
+ K GM I V HV++KQL ++ K+ K + Q
Sbjct: 461 FRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHKRAKPLRHEGQQV 509
>gi|170054796|ref|XP_001863293.1| Poly(A) polymerase beta [Culex quinquefasciatus]
gi|167874980|gb|EDS38363.1| Poly(A) polymerase beta [Culex quinquefasciatus]
Length = 375
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/306 (66%), Positives = 237/306 (77%), Gaps = 20/306 (6%)
Query: 121 ADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA 180
+IDALCVAPR+++R DYF SF E L+ EVT+ RAVEE VP +KMNFDGI+ID+LFA
Sbjct: 35 TNIDALCVAPRNIERQDYFGSFLELLEKQPEVTECRAVEEMLVPDVKMNFDGIKIDLLFA 94
Query: 181 RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA 240
RLALKEIPD+ DLR+DMLLKNLD K +RSLNGCR TDEILRLVPNI+NFRLALR+ KLWA
Sbjct: 95 RLALKEIPDNFDLREDMLLKNLDPKLMRSLNGCRATDEILRLVPNIDNFRLALRSTKLWA 154
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPD 300
KKHGIYS LGY GGVSWAMLVAR CQL PN PV LK+PD
Sbjct: 155 KKHGIYSTSLGYFGGVSWAMLVARTCQL-PNVV-------------------PVFLKRPD 194
Query: 301 NVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDI 360
VNLGF VWDPRVNV R+ LMPIITPAYPQQNSTF+VS STR IM EF +G I+++I
Sbjct: 195 TVNLGFQVWDPRVNVQGRFDLMPIITPAYPQQNSTFHVSSSTRKIMLNEFNRGMQITDEI 254
Query: 361 YNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHI 420
GK WDKLFE P+FF KYR+++VL+ +S + +D LEWCGL+ESK+R+LI NLER HI
Sbjct: 255 MLGKAGWDKLFEAPSFFFKYRYFIVLLVTSNNTDDLLEWCGLVESKIRYLIQNLERILHI 314
Query: 421 NLAHVN 426
NLAHV+
Sbjct: 315 NLAHVH 320
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 493 NAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK 537
N H + +DGMK E RHV++KQL++YL ++LK+++K +
Sbjct: 315 NLAHVHIKVLETTRDGMKTEARHVRRKQLNQYLDPNLLKRERKNQ 359
>gi|409079597|gb|EKM79958.1| hypothetical protein AGABI1DRAFT_113202 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 615
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/556 (42%), Positives = 337/556 (60%), Gaps = 40/556 (7%)
Query: 32 TTALNLSPPNQLDLQRTRE------LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
TT L ++PP + RE L + L+ N+ ET++E R VL ++ LVK+++
Sbjct: 7 TTYLGVTPPISTSVSTEREKEVTITLMDELRRQNMFETEDESQLREIVLGRVAQLVKKFV 66
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
+V++ + + + A+ GGKI+TFGSYRLGVH G+DID LCV P+HV R D+F F
Sbjct: 67 HKVALLRGLSESAADSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRDDFFEYFEPL 126
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
L+ +D VT++ V EA+VPV+K GI +D+L AR+ L IPDD+ L DD LL+N+D++
Sbjct: 127 LRELDGVTEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDER 186
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
C+RSL G RVTD +LRLVP+++ FR +LR IKLWA++ IYSNV G+LGGV+WAMLVARI
Sbjct: 187 CIRSLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARI 246
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYPNA A +V +FF++ QW WPQPVLLK+ ++ L VW+P++ +DR H MPII
Sbjct: 247 CQLYPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPII 306
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYP +T NV+ ST+ IM EEFK+G I + + G W LF +FF KYR+YL
Sbjct: 307 TPAYPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKYRYYLQ 366
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY--------TDTTGVI 437
+IAS+ +++ Q++W G +ES++R LI LE + LAH + + + I
Sbjct: 367 VIASTGNSDLQIKWAGTVESRIRQLIMKLEYVESLTLAHPFIKGFDQVAYCLNEEEVRAI 426
Query: 438 ANGSGSPEITAEGKE--EGGENTSPPVSGVASMWFIGLDF------IAANVILNLTYDIQ 489
A G SP I A KE EG E P S + ++IGL + L+++Y
Sbjct: 427 AQGETSPAIAARKKEDVEGKEGAGPVYS---TTFYIGLMIEPKQPGSSGPRRLDISYPTI 483
Query: 490 HFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL------PAHMLKKDKKTKSGDQN 542
FT V W+ K + M + VRH++ L +Y+ P + +K K N
Sbjct: 484 EFTKQVKLWE----KYDESTMGLIVRHIRSSSLPDYVFDPGERPPKVTQKRTKGPGKTHN 539
Query: 543 TSA----KKRKSDQAL 554
TS K+++S Q++
Sbjct: 540 TSPDMPNKRQRSSQSV 555
>gi|426192448|gb|EKV42384.1| hypothetical protein AGABI2DRAFT_195729 [Agaricus bisporus var.
bisporus H97]
Length = 615
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/556 (42%), Positives = 337/556 (60%), Gaps = 40/556 (7%)
Query: 32 TTALNLSPPNQLDLQRTRE------LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
TT L ++PP + RE L + L+ N+ ET++E R VL ++ LVK+++
Sbjct: 7 TTYLGVTPPISTSVSTEREKEVTITLMDELRRQNMFETEDESQLREIVLGRVAQLVKKFV 66
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
+V++ + + + A+ GGKI+TFGSYRLGVH G+DID LCV P+HV R D+F F
Sbjct: 67 HKVALLRGLSESAADSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRDDFFEYFEPL 126
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
L+ +D VT++ V EA+VPV+K GI +D+L AR+ L IPDD+ L DD LL+N+D++
Sbjct: 127 LRELDGVTEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDER 186
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
C+RSL G RVTD +LRLVP+++ FR +LR IKLWA++ IYSNV G+LGGV+WAMLVARI
Sbjct: 187 CIRSLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARI 246
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYPNA A +V +FF++ QW WPQPVLLK+ ++ L VW+P++ +DR H MPII
Sbjct: 247 CQLYPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPII 306
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYP +T NV+ ST+ IM EEFK+G I + + G W LF +FF KYR+YL
Sbjct: 307 TPAYPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKYRYYLQ 366
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY--------TDTTGVI 437
+IAS+ +++ Q++W G +ES++R LI LE + LAH + + + I
Sbjct: 367 VIASTGNSDLQIKWAGTVESRIRQLIMKLEYVESLTLAHPFIKGFDQVAYCLNEEEVRAI 426
Query: 438 ANGSGSPEITAEGKE--EGGENTSPPVSGVASMWFIGLDF------IAANVILNLTYDIQ 489
A G SP I A KE EG E P S + ++IGL + L+++Y
Sbjct: 427 AQGETSPAIAARKKEDVEGKEGAGPVYS---TTFYIGLMIEPKQPGSSGPRRLDISYPTI 483
Query: 490 HFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL------PAHMLKKDKKTKSGDQN 542
FT V W+ K + M + VRH++ L +Y+ P + +K K N
Sbjct: 484 EFTKQVKLWE----KYDESTMGLIVRHIRSSSLPDYVFDPGERPPKVTQKRTKGPGKTHN 539
Query: 543 TSA----KKRKSDQAL 554
TS K+++S Q++
Sbjct: 540 TSPDMPNKRQRSSQSV 555
>gi|449480779|ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 758
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/590 (39%), Positives = 339/590 (57%), Gaps = 48/590 (8%)
Query: 21 PQSQA-PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
P +QA P YG+T ++++ P D+QR +EL + L + E+ EE + R EVLS++
Sbjct: 17 PANQAVPKCYGVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRIGQ 76
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DY 138
+VK+W+K+++ K + E I+TFGSYRLGVH GADID LCV P +V+R D+
Sbjct: 77 IVKDWVKQLTRIKGYTDQMVEDANAAIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDF 136
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F L+ ++EV++L+ V +A VPV+K FDGI ID+L+A ++ +P+D+D+ D +
Sbjct: 137 FYMLHNILEEMEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVSV 196
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L N+D+ VRSLNGCRV D+IL+LVPN+E+FR ALR +K WAK+ G+YSNV G+LGGV+W
Sbjct: 197 LYNVDEPTVRSLNGCRVADQILKLVPNVESFRTALRCLKFWAKRRGVYSNVTGFLGGVNW 256
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
A+LVAR+CQLYPNA S L+ +FF V++ W+WP PV+L + +LG VWDPR N DR
Sbjct: 257 ALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDR 316
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
H MPIITPAYP NS++NVS ST +M E+F+ G + E+I K W LFE FF
Sbjct: 317 THHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKAQWSSLFEPYLFFE 376
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVI 437
Y++YL + + A+D W G +ES+ RHL +ER L H P Y DT
Sbjct: 377 SYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDT---- 432
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVIL-NLTYDIQHFTNAVH 496
S P + A +F+GL +I +DI+ +
Sbjct: 433 ---------------------SKPCAHCA--FFMGLQRKQGEIIQEGQQFDIRSSVDEFK 469
Query: 497 WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK--------------SGDQN 542
+ K GM+I V HV+++Q+ ++ K+ + ++ +G
Sbjct: 470 HYTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHKRFRASRLSALQRSPNQEDVQNGRSG 529
Query: 543 TSAK--KRKSDQALDELGDKSRPRLDSDSNSLSDKV-NNISNNGDQSSSE 589
+ + KRK+D A E S + S S D V +NISN + +SSE
Sbjct: 530 SCERDLKRKNDPARIEGEHNSPQKRQSISPRRQDSVSSNISNFSNTASSE 579
>gi|297737752|emb|CBI26953.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/564 (40%), Positives = 326/564 (57%), Gaps = 54/564 (9%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G++ ++ + P + DL +TREL + L + ET EE R EVL +++ +VK W+K VS
Sbjct: 16 GVSEPISTAGPTEFDLIKTRELEKFLADSGLYETREEAIRREEVLGRVDQIVKVWVKTVS 75
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSSFFEKLKT 148
AK + + KI+TFGSYRLGVH GADID LCV PRH R D+F L
Sbjct: 76 RAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLAE 135
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
EV +L V +A VPV+K F+G+ ID+L+ARL+L IP+D+D+ + +L+N+D++ VR
Sbjct: 136 TPEVQELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTVR 195
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD+ILRLVPNI+NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVARICQL
Sbjct: 196 SLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQL 255
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA STLV +FF V++QW+WP PV+L + LG PVWDPR N+ DR HLMPIITPA
Sbjct: 256 YPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPA 315
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVS ST IM+EE ++G I +++ T W LFE FF Y++YL +
Sbjct: 316 YPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLFFEAYKNYLQIDI 375
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEIT 447
++ + D W G +ES++R L +ER+ L H +P ++DT+
Sbjct: 376 TAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTS------------- 422
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVI-----LNLTYDIQHFTNAVHWQATQS 502
+F+GL + ++ + F N V W +
Sbjct: 423 ---------------RSFHYCYFMGLRRKEGSAAQEGEQFDIRLTVDDFKNTV-WMYSS- 465
Query: 503 KMMKDGMKIEVRHVKKKQLSEYL-PAHMLKKDKKTKSGDQNTSAK-------KRKSDQAL 554
K GM I V H+++K + ++ P + +G+Q +K KRK
Sbjct: 466 --WKRGMWIHVCHIRRKNIPNFVFPGGVRPPQPMKVAGEQGQVSKPMGFNSQKRKR---- 519
Query: 555 DELGDKSRPRLDSDSNSLSDKVNN 578
DE+ S PR +S SL + V +
Sbjct: 520 DEIDAGSHPR---ESTSLVENVES 540
>gi|302780986|ref|XP_002972267.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
Length = 548
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/534 (41%), Positives = 313/534 (58%), Gaps = 34/534 (6%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
QS G+T ++ + P + D RTR+L + L + E+ EE R EVL +L+ LV
Sbjct: 3 QSNGKKYLGVTEPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQLV 62
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFS 140
KEW+K + + K + ++ KI+TFGSYRLGVH G DID LCV PRHV R D+F
Sbjct: 63 KEWVKNICLRKGYSEQLTQEANAKIFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFG 122
Query: 141 SFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLK 200
F L+ + EVT+L V +A VPV++ F GI ID+L+A LA+ IP+D+D+ + +L+
Sbjct: 123 VFHGMLEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESILR 182
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
NLD+ VRSLNGCRVTD+ILRLVPNIE+FR LR +KLWA+K G+YSNV G+LGGV+WA+
Sbjct: 183 NLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWAL 242
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYH 320
LVARICQLYPNA S LV +FF V++QW+WP PV+L + + +LG VWDPR N DR H
Sbjct: 243 LVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTH 302
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKY 380
MPIITPAYP NS++NVS ST +M EEF + I E I K W LFE FF Y
Sbjct: 303 QMPIITPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAFFDAY 362
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANG 440
++YL + + +D W G +ES++R L + ++ E T G++
Sbjct: 363 KNYLQIDVFAADNDDLRRWKGWVESRLRQLTLKV---------GLDREIEKHTYGMLQCH 413
Query: 441 SGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAA-----NVILNLTYDIQHFTNAV 495
+ E KE G +F+GL ++ ++ F +V
Sbjct: 414 PHPCDFVDESKE-----------GKHCAFFMGLQKRQGLPSQEGQQFDIRLTVEEFRQSV 462
Query: 496 HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRK 549
T ++ K+GM I V HV+++Q +PA++ K + +S++K +
Sbjct: 463 ----TGYQLWKEGMDIAVSHVRRRQ----IPAYVFPGGTKPARPPKLSSSRKAR 508
>gi|281200800|gb|EFA75017.1| polyA polymerase [Polysphondylium pallidum PN500]
Length = 757
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/542 (41%), Positives = 335/542 (61%), Gaps = 32/542 (5%)
Query: 27 VTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIK 86
+TYG+T ++ S P DL+ + EL + LK +N+ ET EE + E+L KLN +V++W+
Sbjct: 25 ITYGVTVPISFSNPTPADLKLSTELEDTLKSFNLFETPEESGKKEEILGKLNLIVRKWVI 84
Query: 87 EVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
+VS+ + ++ +V KI+TFGSYRLGV +DID LCVAP+H+ R+D+F E L
Sbjct: 85 DVSLKRGFTEQMSLEVVAKIFTFGSYRLGVSGPSSDIDTLCVAPKHIMRSDFFDFLGEAL 144
Query: 147 KTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDM-DLRDDMLLKNLDQK 205
K ++T+L V++A+VPVI M F GI ID++FARL+L I +DM DL DD LKNLD +
Sbjct: 145 KVHPDITELNMVKDAYVPVITMIFSGIAIDLIFARLSLSSISEDMNDLIDDAYLKNLDDQ 204
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+ SLNGCRVTD+IL LVP+ FR+ALR IKLWA++ GIYSNVLG+LGGVSWA+L ARI
Sbjct: 205 SITSLNGCRVTDKILTLVPSRATFRMALRFIKLWAQRRGIYSNVLGFLGGVSWALLTARI 264
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKW----PQPVLL-KKPDNVNLGFPVWDPRVNVADRYH 320
CQLYPNAA ST++ +FF ++ W+W P PVLL D VW+ + D+ H
Sbjct: 265 CQLYPNAAPSTIINRFFKIYETWRWGVPGPTPVLLCPIQDGGIFAAKVWNQK---RDKSH 321
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKY 380
LMPI+TPAYP NST+NVS ST +++++EF +G I++ + +G+ W+KL E +FF++Y
Sbjct: 322 LMPILTPAYPSMNSTYNVSKSTLSLLKDEFARGNQIAQKLESGEANWNKLLEKSDFFSRY 381
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANG 440
+ YL + S+ + E+ +W G IESK+R LI LE+ P + A P+ + +
Sbjct: 382 QFYLQIDCSAQNEEEHRKWEGWIESKLRKLISFLEQTPKMKFAIPFPKSFENKPT----- 436
Query: 441 SGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANV-----ILNLTYDIQHFTNAV 495
G T S V + +F+GL F +N +++T + FT+ +
Sbjct: 437 ----PAATTTAANGEAVTDANNSNVCTSFFMGLGFNFSNAPGADKSVDITKAVIDFTHLI 492
Query: 496 HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHML--KKDKKTKSGDQNT---SAKKRKS 550
A + M+++V ++K++QL ++ A +K K K G N+ + KK ++
Sbjct: 493 KDWAGKGPT----MEMKVHYIKRRQLPAFVKAEAPPEEKPKAKKRGSANSADVAKKKNRT 548
Query: 551 DQ 552
DQ
Sbjct: 549 DQ 550
>gi|358059327|dbj|GAA94903.1| hypothetical protein E5Q_01558 [Mixia osmundae IAM 14324]
Length = 618
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/514 (42%), Positives = 316/514 (61%), Gaps = 20/514 (3%)
Query: 26 PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
P G+T + PP L+ T L ++ N+ ETD R VL +L+ +VKE++
Sbjct: 4 PHYLGVTRPVTTDPPKPHSLRMTESLMAEMRARNLFETDAGERRRESVLGRLDGMVKEFV 63
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
+ + + ++ GGKI+TFGSYRLGVH GADID LCV P +V+RAD+F+ F +
Sbjct: 64 RRACQLRGRSQSEIDEAGGKIFTFGSYRLGVHGPGADIDTLCVVPVYVERADFFTIFLDM 123
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
L+ D+V D+ + EA+VP+IK+ F +EID+ FAR+ +PDD++L DD LLK LD++
Sbjct: 124 LRERDDVRDITDIPEAYVPLIKVKFTNVEIDLTFARINRPTVPDDLELGDDNLLKQLDER 183
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
VRSLNG RVTD+ILRLVPNI FR +LR IK WAK+ +Y+NV+G+ GGVSWAMLVARI
Sbjct: 184 DVRSLNGSRVTDQILRLVPNIPVFRDSLRAIKYWAKRRAVYANVVGFPGGVSWAMLVARI 243
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYPN ++ +FF +F W+WP+PVLL L VW+P VN ADR H MP+I
Sbjct: 244 CQLYPNECPGGILSRFFHIFLLWQWPEPVLLTPLKQGPLNVRVWNPHVNSADRMHKMPVI 303
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYP ST N+S S+ +++ E+++G+ I I G+T W +LFE +FF KYR+YL
Sbjct: 304 TPAYPSMCSTHNISHSSMAVIKAEWERGENIVNRIAVGQTTWAELFEPTDFFYKYRYYLQ 363
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDT--------TGVI 437
+ ASS ++QL+W G +ESK+R L NLE + LAH+ + + T ++
Sbjct: 364 ITASSQDMDNQLKWSGTVESKLRTLGANLEGAEGVTLAHIYVDEFEKTYSCKTEEEVKLV 423
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF-----IAANVILNLTYDIQHFT 492
A+G+ +PEI+A E+ ++ V S ++IGL + + L+L+Y FT
Sbjct: 424 ASGASTPEISAR-TEDDIKDVEGAVKLHTSNFYIGLSIDLGPKGSGSKKLDLSYPTCEFT 482
Query: 493 NAV-HWQATQSKMMKDGMKIEVRHVKKKQLSEYL 525
V W+ + M I VR++K L +++
Sbjct: 483 KLVKRWEKYTPE-----MGITVRYMKNIALPDFV 511
>gi|392568429|gb|EIW61603.1| polymerase [Trametes versicolor FP-101664 SS1]
Length = 607
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 253/625 (40%), Positives = 352/625 (56%), Gaps = 59/625 (9%)
Query: 32 TTALNLSPPNQLDLQRTRE------LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
T L ++PP + RE L L+ + E++EE +R VL +L L+K+++
Sbjct: 5 TGYLGVTPPISTNESSIREKEVTTTLMGELQRQGIFESEEEAKTREIVLGRLAALIKKFV 64
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
++VS+++ + A GGKIYTFGSYRLGVH GADID LCVAPRHV R D+F+
Sbjct: 65 RQVSLSRGLSEAAANAAGGKIYTFGSYRLGVHGPGADIDTLCVAPRHVTRDDFFNVLEGM 124
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
L+ ++ VT++ V EA+VP+I GI ID+LFA+L L IP+D+DL+DD LL+NLD+K
Sbjct: 125 LREMEGVTEVSGVPEAYVPIISTEISGIPIDLLFAQLDLPIIPEDLDLQDDNLLRNLDEK 184
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+RSLNG RV +EILRLVPN++ FR ALR IKLWA+K +YSNV G+LGGV+WAMLVAR+
Sbjct: 185 SIRSLNGSRVINEILRLVPNVDVFRTALRCIKLWAQKRAVYSNVNGFLGGVAWAMLVARV 244
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYPNA A +V +FF++ +W WPQPVLLK ++ L VW+P+V DR H MPII
Sbjct: 245 CQLYPNAVAGAIVSRFFVIMHKWSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRSHRMPII 304
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYP +T NV ST+ IM+EEF++G I +D+ GK W LF +FF +YR YL
Sbjct: 305 TPAYPSMCATHNVMQSTQQIMKEEFQRGCAIVDDVMLGKAEWSALFVKHDFFQRYRFYLQ 364
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH-------VNPECYTDTTGVIA 438
++A+S E Q +W G + SK+R L+ LE + LAH V C ++ +
Sbjct: 365 VVAASRDLEMQNKWSGTVASKIRQLVMRLEYVDALKLAHPFIKGFDVVYYCLSEEEAQVV 424
Query: 439 NGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANV------ILNLTYDIQHFT 492
P A+ K+E + ++ + +FIGL L+++Y F
Sbjct: 425 TRGEIPPAVAQRKKEDVADKEGVITVHTTSFFIGLSIKPKEAGSTGPRRLDISYPTTEFV 484
Query: 493 NAVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL--PAHMLKKDKKTKSG----DQNTSA 545
W+ K + M I VRH+K L +++ P + TK D A
Sbjct: 485 KMTKMWE----KYDESAMHIAVRHIKHTVLPDFVFEPGEREAASRPTKRSRSIKDSPAPA 540
Query: 546 KKR-KSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLND 604
KR ++D +D +SRP + S L SSS+ + NS
Sbjct: 541 TKRSRTDLGVDM---QSRPTSSASSTRLP-----------ASSSQVLQTNS--------- 577
Query: 605 SVADSIDNSLDDL---SSTSPHPTP 626
AD+ N LDDL S+TS P P
Sbjct: 578 --ADAGSNMLDDLPHTSATSQTPDP 600
>gi|42562141|ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis
thaliana gb|AF255297 and contains a
Nucleotidyltransferase PF|01909 domain. ESTs
gb|AV536592, gb|AV553256, gb|AV561630, gb|AV532289 come
from this gene [Arabidopsis thaliana]
gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis thaliana]
gi|32527642|gb|AAP86214.1| poly(A) polymerase [Arabidopsis thaliana]
gi|110743114|dbj|BAE99449.1| hypothetical protein [Arabidopsis thaliana]
gi|332191538|gb|AEE29659.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 713
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 273/407 (67%), Gaps = 1/407 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G++ +++ P + D+ +TREL + L+ + E+ EE R EVL L+ +VK WIK +
Sbjct: 11 FGVSEPISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIKTI 70
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSSFFEKLK 147
S AK + + + KI+TFGSYRLGVH GADID LCV PRH R D+F L
Sbjct: 71 SRAKGLNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLS 130
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+ EVT+L V +A VP++ +G+ ID+L+A+L L IP+D+DL D +L+N D++ V
Sbjct: 131 EMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADEQTV 190
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTD+ILRLVPNI+NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVARICQ
Sbjct: 191 RSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQ 250
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA + LV +FF VF QW WP + L PD +LG VWDPR+N DR H+MPIITP
Sbjct: 251 LYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITP 310
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP NS++NVS ST IM+ EF++G I E + + K WD LFE FF Y++YL +
Sbjct: 311 AYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQID 370
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTT 434
S+ + +D +W G +ES++R L +ER+ + H +P + DT+
Sbjct: 371 ISAANVDDLRKWKGWVESRLRQLTLKIERHFKMLHCHPHPHDFQDTS 417
>gi|359472651|ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 587
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/564 (40%), Positives = 326/564 (57%), Gaps = 54/564 (9%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G++ ++ + P + DL +TREL + L + ET EE R EVL +++ +VK W+K VS
Sbjct: 16 GVSEPISTAGPTEFDLIKTRELEKFLADSGLYETREEAIRREEVLGRVDQIVKVWVKTVS 75
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSSFFEKLKT 148
AK + + KI+TFGSYRLGVH GADID LCV PRH R D+F L
Sbjct: 76 RAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLAE 135
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
EV +L V +A VPV+K F+G+ ID+L+ARL+L IP+D+D+ + +L+N+D++ VR
Sbjct: 136 TPEVQELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTVR 195
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD+ILRLVPNI+NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVARICQL
Sbjct: 196 SLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQL 255
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA STLV +FF V++QW+WP PV+L + LG PVWDPR N+ DR HLMPIITPA
Sbjct: 256 YPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPA 315
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVS ST IM+EE ++G I +++ T W LFE FF Y++YL +
Sbjct: 316 YPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLFFEAYKNYLQIDI 375
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEIT 447
++ + D W G +ES++R L +ER+ L H +P ++DT+
Sbjct: 376 TAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTS------------- 422
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVI-----LNLTYDIQHFTNAVHWQATQS 502
+F+GL + ++ + F N V W +
Sbjct: 423 ---------------RSFHYCYFMGLRRKEGSAAQEGEQFDIRLTVDDFKNTV-WMYSS- 465
Query: 503 KMMKDGMKIEVRHVKKKQLSEYL-PAHMLKKDKKTKSGDQNTSAK-------KRKSDQAL 554
K GM I V H+++K + ++ P + +G+Q +K KRK
Sbjct: 466 --WKRGMWIHVCHIRRKNIPNFVFPGGVRPPQPMKVAGEQGQVSKPMGFNSQKRKR---- 519
Query: 555 DELGDKSRPRLDSDSNSLSDKVNN 578
DE+ S PR +S SL + V +
Sbjct: 520 DEIDAGSHPR---ESTSLVENVES 540
>gi|414872023|tpg|DAA50580.1| TPA: hypothetical protein ZEAMMB73_982818 [Zea mays]
Length = 745
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/534 (40%), Positives = 314/534 (58%), Gaps = 31/534 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++LS P + DL +T E+ + L + E +E R EVL KL+ VK WIK+
Sbjct: 11 HGVTEPISLSGPTEKDLMQTAEVEKYLSDAGLYERQDEAILREEVLGKLDQTVKAWIKKA 70
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK-LK 147
+ + KI+TFGSYRLGVH GADID LCV PRH R +YF + L
Sbjct: 71 TRISGYGEQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFRWLHDILA 130
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+ EV++L V +A VPV+ +G+ ID+L+A LA IP+D+DL D +L N+D++ V
Sbjct: 131 EMPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILHNVDEQTV 190
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTD+ILRLVPNI +FR LR I+ W K+ G+YSNV+G+LGG++WA+LV RICQ
Sbjct: 191 RSLNGCRVTDQILRLVPNILSFRTTLRFIRCWGKRRGVYSNVMGFLGGINWAILVGRICQ 250
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA+ S L+ +FF V+S+WKWP PV+L + LG PVWDPR N DR H MPIITP
Sbjct: 251 LYPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITP 310
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP NS++NVS+STR +M +EF Q I + I GK WD LFE FF Y++YL +
Sbjct: 311 AYPCMNSSYNVSVSTRYVMVQEFTQAFEICQAIDEGKADWDALFEPYPFFESYKNYLEVN 370
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIANGSGSPEI 446
++ + +D W G +ES++R L+ +ER H + LAH P+ ++D +
Sbjct: 371 ITARNEDDLRNWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKS------------ 418
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGL-DFIAANVILNLTYDIQHFTNAVHWQATQSKMM 505
+ +F+GL +DI+ N +
Sbjct: 419 ----------------RPLHIFYFMGLWRKQTTQAQETEQFDIRGIVNEFKNTICAYQHR 462
Query: 506 KDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGD 559
K+GM IEV HVK+K++ ++ ++ + +++ +N+ A + A D++G+
Sbjct: 463 KEGMDIEVSHVKRKEIPLFVFPGGVRPSRTSRTTHKNSRAIPTRDVSADDQVGN 516
>gi|413943851|gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943852|gb|AFW76501.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 702
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/518 (41%), Positives = 308/518 (59%), Gaps = 30/518 (5%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
S AP YG+T L+L P + DLQRT EL + L + E+ +E + R EVL KL+ +VK
Sbjct: 5 SDAPKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVK 64
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSS 141
+W+K+++ + + E+ ++TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 65 DWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIV 124
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
L ++VT+L+ V +A VPV+K F GI ID+L+A ++L +P D+D+ +L +
Sbjct: 125 LHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYD 184
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D+ VRSLNGCRV D+I+RLVPN ENFR ALR +K WAK+ G+YSNV G+LGGV+WA+L
Sbjct: 185 VDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALL 244
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR+CQLYPNA S LV +FF VF+QW+WP PV+L + LGFPVWDPR N DR H
Sbjct: 245 VARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHH 304
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYP NS++NVS ST +M E+F+ G I ++I KT W LFE FF Y+
Sbjct: 305 MPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYK 364
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANG 440
+YL + + ED W G +ES++R L +ER+ + L H P Y D + A+
Sbjct: 365 NYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHC 424
Query: 441 SGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI-AANVILNLTYDIQHFTNAVHWQA 499
+ +F+GL + +DI+ + +
Sbjct: 425 A---------------------------FFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEI 457
Query: 500 TQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK 537
K GM++ V HV++KQ+ Y+ K+ + ++
Sbjct: 458 NMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSR 495
>gi|326517509|dbj|BAK03673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/533 (41%), Positives = 310/533 (58%), Gaps = 31/533 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G++ ++LS P + D+ +T E+ + L + E+ EE SR EVL KL+ VK WIK+ +
Sbjct: 10 GVSEPISLSGPTEKDVVQTAEVEKFLADAGLYESQEEAVSREEVLGKLDQTVKTWIKKAT 69
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF-SSFFEKLKT 148
+ KI+TFGSYRLGVH GADID LCV PRH R DYF + L
Sbjct: 70 RVSGYGDQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFFRCLHDMLAE 129
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EV++L V +A VPV+ G+ ID+L+A LA IPDD+DL D +L N+D++ VR
Sbjct: 130 MPEVSELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPDDLDLSQDSILHNVDEQAVR 189
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD+ILRLVPNI +FR LR ++ W K+ G+YSNV+G+LGG++WA+LVARICQL
Sbjct: 190 SLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWAILVARICQL 249
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA+ S L+ +FF V+SQWKWP PV L + LG PVWDPR N DR H MPIITPA
Sbjct: 250 YPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPA 309
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVS STR +M +EF +G I + I + WD LFE FF Y++YL +
Sbjct: 310 YPCMNSSYNVSTSTRYVMIQEFTRGYEICQAIDENRATWDDLFEPYPFFELYKNYLEVGI 369
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIANGSGSPEIT 447
++ S +D W G +ES++R L+ ER H + LAH +P ++D +
Sbjct: 370 TARSEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGS------------- 416
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGL-DFIAANVILNLTYDIQHFTNAVHWQATQSKMMK 506
+ S +F+GL A +DI+ N +
Sbjct: 417 ---------------RPLHSFYFMGLWRKQTAQPQEAEQFDIRGIVNEFKSAVLAYAHRR 461
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGD 559
+GM IEV HVK+K + ++ ++ + +++ +++ R A ++G+
Sbjct: 462 EGMDIEVSHVKRKDIPLFVFPGGVRPPRSSRTAARSSRTVSRNVVTADGQVGN 514
>gi|293335951|ref|NP_001168358.1| uncharacterized protein LOC100382126 [Zea mays]
gi|223947741|gb|ACN27954.1| unknown [Zea mays]
gi|413943856|gb|AFW76505.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 694
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/518 (41%), Positives = 308/518 (59%), Gaps = 30/518 (5%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
S AP YG+T L+L P + DLQRT EL + L + E+ +E + R EVL KL+ +VK
Sbjct: 5 SDAPKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVK 64
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSS 141
+W+K+++ + + E+ ++TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 65 DWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIV 124
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
L ++VT+L+ V +A VPV+K F GI ID+L+A ++L +P D+D+ +L +
Sbjct: 125 LHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYD 184
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D+ VRSLNGCRV D+I+RLVPN ENFR ALR +K WAK+ G+YSNV G+LGGV+WA+L
Sbjct: 185 VDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALL 244
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR+CQLYPNA S LV +FF VF+QW+WP PV+L + LGFPVWDPR N DR H
Sbjct: 245 VARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHH 304
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYP NS++NVS ST +M E+F+ G I ++I KT W LFE FF Y+
Sbjct: 305 MPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYK 364
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANG 440
+YL + + ED W G +ES++R L +ER+ + L H P Y D + A+
Sbjct: 365 NYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHC 424
Query: 441 SGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI-AANVILNLTYDIQHFTNAVHWQA 499
+ +F+GL + +DI+ + +
Sbjct: 425 A---------------------------FFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEI 457
Query: 500 TQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK 537
K GM++ V HV++KQ+ Y+ K+ + ++
Sbjct: 458 NMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSR 495
>gi|356507941|ref|XP_003522721.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 651
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/534 (41%), Positives = 315/534 (58%), Gaps = 40/534 (7%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
Q Q P Y T L+L+ P DLQR EL + L + E++EE ++R EVL +L+ +V
Sbjct: 16 QEQQPNKYAFTKPLSLAGPTDADLQRNNELDKFLLDSGLYESNEESAARKEVLHRLDQIV 75
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFS 140
K W+K+++ + + E I+TFGSYRLGVH G DID LC+ P +V+R D+F
Sbjct: 76 KNWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREEDFFV 135
Query: 141 SFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLK 200
L ++EV++L+ V +A VPV+K F GI ID+L+A ++L +P+D+D+ +L
Sbjct: 136 ILHNILAEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLY 195
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
++D+ VRSLNGCRV D+IL+LVPN+E+FR ALR +K WAK+ G+YSNV G+LGGV+WA+
Sbjct: 196 DVDEPTVRSLNGCRVADQILKLVPNVEHFRTALRCLKFWAKRRGVYSNVTGFLGGVNWAI 255
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYH 320
LVARICQLYPNA S LV +FF V++QW+WP PV+L + LGFP+WDPR N DR+H
Sbjct: 256 LVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFH 315
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKY 380
MPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LF+ FF Y
Sbjct: 316 TMPIITPAYPCMNSSYNVSASTLRVMMEQFRYGNKICDEIELNKAQWSALFQPYIFFEAY 375
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIAN 439
++YL + + A+D L W G +ES++R L +ER+ + L H P Y DT+ + A+
Sbjct: 376 KNYLQVDIIASDADDLLAWRGWVESRLRLLTLKIERDTNGMLQCHPYPNEYVDTSKLCAH 435
Query: 440 GSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQA 499
S ++EG V G F DI+ + +
Sbjct: 436 ---SAFFMGLQRKEG-------VRGQEGQQF----------------DIRGTVDEFRQEI 469
Query: 500 TQSKMMKDGMKIEVRHVKKKQLSEY----------LPAHMLKKDKKTKSGDQNT 543
K GM I V HV++KQL + +P H+ + +KT GD T
Sbjct: 470 NMYMYWKPGMDIFVSHVRRKQLPAFVFPGGYKRTRMPRHISHQAEKT--GDDAT 521
>gi|413943854|gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943855|gb|AFW76504.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 686
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/518 (41%), Positives = 308/518 (59%), Gaps = 30/518 (5%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
S AP YG+T L+L P + DLQRT EL + L + E+ +E + R EVL KL+ +VK
Sbjct: 5 SDAPKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVK 64
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSS 141
+W+K+++ + + E+ ++TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 65 DWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIV 124
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
L ++VT+L+ V +A VPV+K F GI ID+L+A ++L +P D+D+ +L +
Sbjct: 125 LHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYD 184
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D+ VRSLNGCRV D+I+RLVPN ENFR ALR +K WAK+ G+YSNV G+LGGV+WA+L
Sbjct: 185 VDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALL 244
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR+CQLYPNA S LV +FF VF+QW+WP PV+L + LGFPVWDPR N DR H
Sbjct: 245 VARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHH 304
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYP NS++NVS ST +M E+F+ G I ++I KT W LFE FF Y+
Sbjct: 305 MPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYK 364
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANG 440
+YL + + ED W G +ES++R L +ER+ + L H P Y D + A+
Sbjct: 365 NYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHC 424
Query: 441 SGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI-AANVILNLTYDIQHFTNAVHWQA 499
+ +F+GL + +DI+ + +
Sbjct: 425 A---------------------------FFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEI 457
Query: 500 TQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK 537
K GM++ V HV++KQ+ Y+ K+ + ++
Sbjct: 458 NMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSR 495
>gi|413943853|gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 696
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/518 (41%), Positives = 308/518 (59%), Gaps = 30/518 (5%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
S AP YG+T L+L P + DLQRT EL + L + E+ +E + R EVL KL+ +VK
Sbjct: 5 SDAPKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVK 64
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSS 141
+W+K+++ + + E+ ++TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 65 DWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIV 124
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
L ++VT+L+ V +A VPV+K F GI ID+L+A ++L +P D+D+ +L +
Sbjct: 125 LHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYD 184
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D+ VRSLNGCRV D+I+RLVPN ENFR ALR +K WAK+ G+YSNV G+LGGV+WA+L
Sbjct: 185 VDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALL 244
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR+CQLYPNA S LV +FF VF+QW+WP PV+L + LGFPVWDPR N DR H
Sbjct: 245 VARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHH 304
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYP NS++NVS ST +M E+F+ G I ++I KT W LFE FF Y+
Sbjct: 305 MPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYK 364
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANG 440
+YL + + ED W G +ES++R L +ER+ + L H P Y D + A+
Sbjct: 365 NYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHC 424
Query: 441 SGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI-AANVILNLTYDIQHFTNAVHWQA 499
+ +F+GL + +DI+ + +
Sbjct: 425 A---------------------------FFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEI 457
Query: 500 TQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK 537
K GM++ V HV++KQ+ Y+ K+ + ++
Sbjct: 458 NMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSR 495
>gi|328871002|gb|EGG19374.1| polyA polymerase [Dictyostelium fasciculatum]
Length = 803
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/561 (41%), Positives = 328/561 (58%), Gaps = 78/561 (13%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++L+ P +D +++ EL L+ +N+ E EE R EVL KL+ +VK+W +V
Sbjct: 77 YGVTEPISLASPTSIDTKQSTELETTLRGFNLFEPPEESRLREEVLGKLDAIVKQWAIKV 136
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S+ K +A +V KI+T+GSYRLGVH G+DID LCV P+H+ RAD+F + + L
Sbjct: 137 SVLKGFTEQMASEVIAKIFTYGSYRLGVHASGSDIDTLCVTPKHIMRADFFGTLADVLCV 196
Query: 149 VDEVTDLRA---------------------------------VEEAFVPVIKMNFDGIEI 175
E+T+ V++AFVPVIKM F GI I
Sbjct: 197 HPEITEFTVSTFFSGSSGSSGGSSSGSSGLQRILIKKTMVMPVKDAFVPVIKMIFCGIPI 256
Query: 176 DMLFARLALKEIPDDM-DLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALR 234
D++FARL++ IP+D+ DL D+ LKN+D KC+ SLNGCRVTD+ILRLVPN+ FR+ALR
Sbjct: 257 DLIFARLSIPAIPEDLNDLIDENYLKNVDDKCIVSLNGCRVTDQILRLVPNVTTFRMALR 316
Query: 235 TIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPV 294
IKLWA++ G+YSNVLG LGGVSWA+L ARICQLYPNAA ST++ +FF ++ WKWP P+
Sbjct: 317 CIKLWAQRRGVYSNVLGLLGGVSWALLTARICQLYPNAAPSTIINRFFKIYDGWKWPSPI 376
Query: 295 LL-KKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQG 353
LL + D L VW+ + D+ HLMPI+TPAYP NST+NVS ST ++++ EF +G
Sbjct: 377 LLCQIQDGGQLAAKVWNQK---RDKSHLMPILTPAYPSMNSTYNVSRSTLSLLKSEFSRG 433
Query: 354 KTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGN 413
I++ I +G+ W L E +FFT+YR YL + S+ + +W G IESK+R LI N
Sbjct: 434 AEITKKIDSGERKWTDLVEKGDFFTRYRFYLQIDVSAPEEDTHRKWEGWIESKLRILISN 493
Query: 414 LERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGL 473
LE+ P++ A + + + + NG G+ + +F+GL
Sbjct: 494 LEQTPNMKFAIPYAKSFANKASAV-NG-----------------------GICTCFFMGL 529
Query: 474 DF-----IAANVILNLTYDIQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYLPA 527
F I A+ ++LT + FTN + W K+ MKI ++KKK L +
Sbjct: 530 QFNFSTAIGADKNVDLTGAVTSFTNLIKDWPG---KLPTIEMKIH--YIKKKNLPVF--- 581
Query: 528 HMLKKDKKTKSGDQNTSAKKR 548
+K + Q T+AKKR
Sbjct: 582 --VKDEGPEHPPKQKTAAKKR 600
>gi|330796347|ref|XP_003286229.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
gi|325083816|gb|EGC37259.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
Length = 671
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/529 (42%), Positives = 322/529 (60%), Gaps = 52/529 (9%)
Query: 27 VTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIK 86
V G+T ++ SPP+ LDL+ + +L L +N+ E+ EE R EVL KLN +V+EW K
Sbjct: 44 VVLGVTEPISTSPPSALDLKLSNDLENTLISFNLFESPEESRKREEVLGKLNQIVREWAK 103
Query: 87 EVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
+VSI K P A +V KI+TFGSYRLGVH +DID LCV P+H+ R+D+F E L
Sbjct: 104 QVSIKKGYPEQTAAEVVAKIFTFGSYRLGVHGPNSDIDTLCVGPKHIMRSDFFDDLSESL 163
Query: 147 KTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDM-DLRDDMLLKNLDQK 205
KT E+T+ V++AFVPVI M F G+ ID+++ARL+L IP+++ DL D+ LKN+D+K
Sbjct: 164 KTHPEITEFTTVKDAFVPVINMVFSGVPIDLIYARLSLTAIPEELNDLIDEGYLKNVDEK 223
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+ SLNGCRV D+IL+LVPNI NFR+ALR IKLWA + +LGG++WA+L ARI
Sbjct: 224 SILSLNGCRVADQILKLVPNIPNFRMALRCIKLWA---------ISFLGGITWALLTARI 274
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKK-PDNVNLGFPVWDPRVNVADRYHLMPI 324
CQLYPN+A ST++ +FF V+ WKWP PVLL + L VW+ + D+ HLMPI
Sbjct: 275 CQLYPNSAPSTIINRFFKVYENWKWPAPVLLTHLVEGGALAAKVWNAK---RDKAHLMPI 331
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL 384
+TPAYP NST+NVS ST +++ EF +G I+ I ++ ++ L E +FFT+YR Y+
Sbjct: 332 LTPAYPMMNSTYNVSKSTMQLLKNEFVRGAEITRKIETNESTYNALLEKSDFFTRYRFYI 391
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSP 444
+ S+ + ED +W G IESK+R LI NLE P + A P+ +++ + + P
Sbjct: 392 QIDCSAGNEEDHRKWEGWIESKLRFLISNLEMTPKMKYAVPFPKSFSN----LIHKESHP 447
Query: 445 EITAEGKEEGGENTSPPVSGVASMWFIGLDF-----IAANVILNLTYDIQHFTNAV-HWQ 498
+ + + +F+GL F A+ ++LT + FT+ + W
Sbjct: 448 D------------------QICTTFFMGLVFNFPTTPGADKSVDLTKAVSEFTSTIKEWL 489
Query: 499 ATQ--SKMMKDGMKIEVRHVKKKQL-----SEYLPAHMLKKDKKTKSGD 540
TQ + M D I+V+++KKKQL SE PA K+ +GD
Sbjct: 490 RTQPNPETMAD---IKVQYIKKKQLPSFIQSEIPPAEPKVNKKRVSTGD 535
>gi|297743180|emb|CBI36047.3| unnamed protein product [Vitis vinifera]
Length = 677
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/590 (38%), Positives = 332/590 (56%), Gaps = 40/590 (6%)
Query: 10 MQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSS 69
M +SK D P+ Q+ YG+T ++++ P ++D+QR+ EL + L + E+ EE
Sbjct: 1 MVSSKGLGDSPPR-QSVKQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIK 59
Query: 70 RMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVA 129
R EVL +L +VK+W+K+++ + + E ++TFGSYRLGVH G DID LC+
Sbjct: 60 RAEVLDRLGQIVKDWVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIG 119
Query: 130 PRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIP 188
P +V R D+F L ++EVT+L+ V +A VPV+K FDGI ID+L+A ++L +P
Sbjct: 120 PSYVSREEDFFFILHNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVP 179
Query: 189 DDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSN 248
+D+D+ D +L N+D+ VRSLNGCRV D+IL+LVPN+E+F LR +K WAK+ G+YSN
Sbjct: 180 EDLDISDLSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSN 239
Query: 249 VLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPV 308
V G+LGGV+WA+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGF V
Sbjct: 240 VTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSV 299
Query: 309 WDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWD 368
WDPR N DR H MPIITPAYP NS++NVSIST +M E+F+ G I E I W
Sbjct: 300 WDPRKNPRDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWG 359
Query: 369 KLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNP 427
LFE FF Y++YL + +V +D W G +ES++R L +ER+ L H P
Sbjct: 360 ALFEPYLFFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYP 419
Query: 428 ECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVIL-NLTY 486
Y DT+ ++ + +F+GL +I +
Sbjct: 420 HEYVDTSKQCSHCA---------------------------FFMGLQRKQGEIIQEGQQF 452
Query: 487 DIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK-----SGDQ 541
DI+ + K GM+I V HV++KQ+ Y+ K+ + + GD+
Sbjct: 453 DIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQRPVNQQQGDE 512
Query: 542 NTSAKKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECT 591
++ + S Q D + P + S +D+ NI + CT
Sbjct: 513 ASAKRLTISPQRQDSVS----PEIISHRWMKADEKGNIEPDKSDKPIPCT 558
>gi|297724965|ref|NP_001174846.1| Os06g0558700 [Oryza sativa Japonica Group]
gi|255677141|dbj|BAH93574.1| Os06g0558700 [Oryza sativa Japonica Group]
Length = 708
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/558 (39%), Positives = 321/558 (57%), Gaps = 34/558 (6%)
Query: 20 KPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
+PQ Q YG+T ++L+ P ++DLQ+T EL + L + E+ EE + R EVL +L+
Sbjct: 15 QPQKQ----YGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDK 70
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DY 138
+VK+W+K+++ + + E+ ++TFGSYRLGVH GADID LCV P +V+R D+
Sbjct: 71 IVKDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDF 130
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F + L +EVT+L+ V +A VPV+K F GI ID+L+A ++L +P D+D+ +
Sbjct: 131 FIVLHDILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSV 190
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L ++D+ VRSLNGCRV D+ILRLVPN+ENFR LR +K WAKK G+YSNV G+LGGV+W
Sbjct: 191 LYDVDEVTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNW 250
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
A+LVAR+CQLYPNA S LV +FF VF+QW+WP PV+L + LGFPVWDPR DR
Sbjct: 251 ALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDR 310
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
H MPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 311 SHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFE 370
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVI 437
Y++YL + + ED W G +ES++R L +ER+ + L H P Y D +
Sbjct: 371 AYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 430
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI-AANVILNLTYDIQHFTNAVH 496
A+ + +F+GL A + +DI+ +
Sbjct: 431 AHCA---------------------------FFMGLSRKEGAKIQEGQQFDIRGTVDEFR 463
Query: 497 WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDE 556
+ GM++ V HV++KQ+ Y+ K+ + ++ + + K +
Sbjct: 464 HDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHINHPQQSNKNDVEDGTAN 523
Query: 557 LGDKSRPRLDSDSNSLSD 574
+P+ D+ + D
Sbjct: 524 RSPDGQPKRKHDTAGVYD 541
>gi|53792977|dbj|BAD54151.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
Length = 740
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/558 (39%), Positives = 320/558 (57%), Gaps = 34/558 (6%)
Query: 20 KPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
+PQ Q YG+T ++L+ P ++DLQ+T EL + L + E+ EE + R EVL +L+
Sbjct: 15 QPQKQ----YGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDK 70
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DY 138
+VK+W+K+++ + + E+ ++TFGSYRLGVH GADID LCV P +V+R D+
Sbjct: 71 IVKDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDF 130
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F + L +EVT+L+ V +A VPV+K F GI ID+L+A ++L +P D+D+ +
Sbjct: 131 FIVLHDILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSV 190
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L ++D+ VRSLNGCRV D+ILRLVPN+ENFR LR +K WAKK G+YSNV G+LGGV+W
Sbjct: 191 LYDVDEVTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNW 250
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
A+LVAR+CQLYPNA S LV +FF VF+QW+WP PV+L + LGFPVWDPR DR
Sbjct: 251 ALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDR 310
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
H MPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 311 SHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFE 370
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVI 437
Y++YL + + ED W G +ES++R L +ER+ + L H P Y D +
Sbjct: 371 AYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 430
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI-AANVILNLTYDIQHFTNAVH 496
A+ +F+GL A + +DI+ +
Sbjct: 431 AH---------------------------CAFFMGLSRKEGAKIQEGQQFDIRGTVDEFR 463
Query: 497 WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDE 556
+ GM++ V HV++KQ+ Y+ K+ + ++ + + K +
Sbjct: 464 HDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHINHPQQSNKNDVEDGTAN 523
Query: 557 LGDKSRPRLDSDSNSLSD 574
+P+ D+ + D
Sbjct: 524 RSPDGQPKRKHDTAGVYD 541
>gi|58220767|gb|AAW68015.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 708
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/558 (39%), Positives = 321/558 (57%), Gaps = 34/558 (6%)
Query: 20 KPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
+PQ Q +G+T ++L+ P ++DLQ+T EL + L + E+ EE + R EVL +L+
Sbjct: 15 QPQKQ----FGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDK 70
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DY 138
+VK+W+K+++ + + E+ ++TFGSYRLGVH GADID LCV P +V+R D+
Sbjct: 71 IVKDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDF 130
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F + L +EVT+L+ V +A VPV+K F GI ID+L+A ++L +P D+D+ +
Sbjct: 131 FIVLHDILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSV 190
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L ++D+ VRSLNGCRV D+ILRLVPN+ENFR LR +K WAKK G+YSNV G+LGGV+W
Sbjct: 191 LYDVDEVTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNW 250
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
A+LVAR+CQLYPNA S LV +FF VF+QW+WP PV+L + LGFPVWDPR DR
Sbjct: 251 ALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDR 310
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
H MPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 311 SHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFE 370
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVI 437
Y++YL + + ED W G +ES++R L +ER+ + L H P Y D +
Sbjct: 371 AYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 430
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI-AANVILNLTYDIQHFTNAVH 496
A+ + +F+GL A + +DI+ +
Sbjct: 431 AHCA---------------------------FFMGLSRKEGAKIQEGQQFDIRGTVDEFR 463
Query: 497 WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDE 556
+ GM++ V HV++KQ+ Y+ K+ + ++ + + K +
Sbjct: 464 HDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHINHPQQSNKNDVEDGTAN 523
Query: 557 LGDKSRPRLDSDSNSLSD 574
+P+ D+ + D
Sbjct: 524 RSPDGQPKRKHDTAGVYD 541
>gi|226479000|emb|CAX72995.1| poly (A) polymerase beta [Schistosoma japonicum]
Length = 704
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/627 (37%), Positives = 365/627 (58%), Gaps = 66/627 (10%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G T AL+ P + DL+ T+EL L N+ ET EE+S R E L +L + WI++ +
Sbjct: 13 GETGALSFKKPTEQDLKDTQELEASLAQLNIFETQEEISQRREALVRLQEISNGWIRQKA 72
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+ +N+P VA GKI+TFGSYRLGV+ +GADID+L V PR + R ++FS F L
Sbjct: 73 LEQNLPTHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITREEFFSDFQTVLAEN 132
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRD--DMLLKNLDQKCV 207
V DL AV +AFVPV+KM F G+EID+LFA++ IP++ L + ++L++N+D++ V
Sbjct: 133 PNVEDLHAVVDAFVPVVKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNMDERDV 192
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RS+NG RVT++IL LV N +F++AL+ I++WAK+ +YSN LG+LGGVSWA+LV+RICQ
Sbjct: 193 RSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILVSRICQ 252
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNV-NLGFPVWDPRVNVADRYHLMPIIT 326
LYP A S +V FF +FSQW WP+PV L++ + + +L PVWDPR+N +D+YHLMPI+T
Sbjct: 253 LYPYATPSMIVYLFFTIFSQWPWPKPVRLRESEYIASLCLPVWDPRLNPSDQYHLMPILT 312
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVL 386
P+YP QNST+NV S R I++ E KQG + K W LFE FF +YRHY+V+
Sbjct: 313 PSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKRSWSNLFEAA-FFFQYRHYVVV 371
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEI 446
I +E CGL+ES++R L+ N E N ++ +AH+N Y
Sbjct: 372 IVVGNVKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHINCRAY---------------- 415
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGLDF------IAANVI------------LNLTYDI 488
GK ++ + WFIG++F + + V ++L+ +I
Sbjct: 416 ---GKGPNDDD-----ANFVRKWFIGMEFDRNTNSLTSTVHNSNTAGEKPTLNVDLSENI 467
Query: 489 QHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKR 548
F ++ + + + + + V++VKK QL++++ A + + K+ Q +A
Sbjct: 468 SSFEKSI-----ERGLSSEDLSVTVKYVKKSQLAQFISAEDMDEIKR-----QAAAAALS 517
Query: 549 KSDQALDEL-GDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLNDSVA 607
+ + + L G + P SN+ +++ +++ + S+SE E +S S L +SV+
Sbjct: 518 NVNNSTENLKGVRQLP-----SNNALSTMSSPASSIELSTSE--EASSPSN--RLQNSVS 568
Query: 608 DSIDNSLDDLSSTSPHPTPPVKVLSDC 634
S SL +S+S PP +S C
Sbjct: 569 TSSLISLATANSSSDLKCPPSSPISTC 595
>gi|297802710|ref|XP_002869239.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
gi|297315075|gb|EFH45498.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 748
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/541 (40%), Positives = 316/541 (58%), Gaps = 32/541 (5%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P +P +YG+T L+L+ P+ D++R EL + L + E+ ++ R EVL +++ +
Sbjct: 12 PPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQI 71
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYF 139
VK W+K+++ + + E I+TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 72 VKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFF 131
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
+ L ++EVT+L V +A VPV+K F GI ID+L+A ++L +P D+D+ +L
Sbjct: 132 IILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVL 191
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
++D+ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YSNV G+LGGV+WA
Sbjct: 192 CDVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWA 251
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWDPR N DRY
Sbjct: 252 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRKNHRDRY 311
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 312 HLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEA 371
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIA 438
Y++YL + + AED L W G +ES+ R L +ER+ + + + H P Y DT
Sbjct: 372 YKNYLQVDIVAGDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFL 431
Query: 439 NGSGSPEIT-AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHW 497
+ + + AEG GG+ +DI+ +
Sbjct: 432 HCAFFMGLQRAEGV--GGQECQ-------------------------QFDIRGTVDEFRQ 464
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDEL 557
+ K GM + V HV+++QL ++ + ++ ++++ QN K D +
Sbjct: 465 EVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRH--QNQPGGKSGEDGTVSHS 522
Query: 558 G 558
G
Sbjct: 523 G 523
>gi|242038623|ref|XP_002466706.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
gi|241920560|gb|EER93704.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
Length = 750
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/533 (40%), Positives = 312/533 (58%), Gaps = 31/533 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++LS P DL +T E+ + L + E+ +E R EVL KL+ VK WIK+ +
Sbjct: 12 GVTEPISLSGPTDKDLMQTTEVEKYLSDAGLYESQDEAVLREEVLGKLDQTVKAWIKKAT 71
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFF-EKLKT 148
+ KI+TFGSYRLGVH GADID LCV PRH R +YF + + L
Sbjct: 72 RISGYGEQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFRWLHDMLAE 131
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EV++L V +A VPV+ +G+ ID+L+A LA IP+D+DL D +L N+D++ VR
Sbjct: 132 MPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILNNVDEQTVR 191
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD+ILRLVPNI +FR LR I+ W K+ G+YSNV+G+LGG++WA+LV RICQL
Sbjct: 192 SLNGCRVTDQILRLVPNILSFRTTLRFIRYWGKRRGVYSNVMGFLGGINWAILVGRICQL 251
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA+ S L+ +FF V+S+WKWP PV+L + LG PVWDPR N DR H MPIITPA
Sbjct: 252 YPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPA 311
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVS+STR +M +EF + I + I GK WD LFE FF Y++YL +
Sbjct: 312 YPCMNSSYNVSVSTRYVMTQEFTRAFEICQAIDEGKADWDALFEPYPFFESYKNYLEVNI 371
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIANGSGSPEIT 447
++ + ++ W G +ES++R L+ +ER H + LAH P+ ++D +
Sbjct: 372 TARNEDELRSWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKS------------- 418
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNL-TYDIQHFTNAVHWQATQSKMMK 506
+ +F+GL +DI+ N + K
Sbjct: 419 ---------------RPLHCFYFMGLWRKQTTQTQEAEQFDIRGIVNEFKNTICAYQQWK 463
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGD 559
+GM IEV HVK+K++ ++ ++ + +++ +N+ A D++G+
Sbjct: 464 EGMDIEVSHVKRKEIPLFVFPGGVRPSRSSRTAHKNSRTVPTCDVSADDQVGN 516
>gi|147790301|emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/571 (38%), Positives = 324/571 (56%), Gaps = 52/571 (9%)
Query: 10 MQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSS 69
M +SK D P+ Q+ YG+T ++++ P ++D+QR+ EL ++ EE
Sbjct: 1 MVSSKGLGDSPPR-QSVKQYGVTKPISVAGPTEVDIQRSLEL---------EKSKEEAIK 50
Query: 70 RMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVA 129
R EVL +L +VK+W+K+++ + + E ++TFGSYRLGVH G DID LC+
Sbjct: 51 RAEVLDRLGQIVKDWVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIG 110
Query: 130 PRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIP 188
P +V R D+F L ++EVT+L+ V +A VPV+K FDGI ID+L+A ++L +P
Sbjct: 111 PSYVSREEDFFFILHNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVP 170
Query: 189 DDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSN 248
+D+D+ D +L N+D+ VRSLNGCRV D+IL+LVPN+E+F LR +K WAK+ G+YSN
Sbjct: 171 EDLDISDLSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSN 230
Query: 249 VLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPV 308
V G+LGGV+WA+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGF V
Sbjct: 231 VTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSV 290
Query: 309 WDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWD 368
WDPR N DR H MPIITPAYP NS++NVSIST +M E+F+ G I E I W
Sbjct: 291 WDPRKNPRDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWG 350
Query: 369 KLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNP 427
LFE FF Y++YL + +V +D W G +ES++R L +ER+ L H P
Sbjct: 351 ALFEPYLFFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYP 410
Query: 428 ECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVIL-NLTY 486
Y DT+ ++ + +F+GL +I +
Sbjct: 411 HEYVDTSKQCSHCA---------------------------FFMGLQRKQGEIIQEGQQF 443
Query: 487 DIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYL------------PAHMLKKDK 534
DI+ + K GM+I V HV++KQ+ Y+ P + + D+
Sbjct: 444 DIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQRPVNQQQGDE 503
Query: 535 KTKSGDQNTSAKKRKSDQALDELGDKSRPRL 565
++G K++K + +D DK+ RL
Sbjct: 504 ACRTGSSEKHMKRKKDPEEVDVEQDKAAKRL 534
>gi|297850192|ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338819|gb|EFH69236.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 716
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/524 (41%), Positives = 302/524 (57%), Gaps = 32/524 (6%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++L P +LD+ +TREL + L+ + E+ EE R EVL L+ +VK WIK +
Sbjct: 11 FGITEPISLGGPTELDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIKTI 70
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSSFFEKLK 147
S K + + KI+TFGSYRLGVH GADID LCV PRH R D+F L
Sbjct: 71 SRTKGLNDELLHLANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLS 130
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+ EVT+L V +A VP++ +G+ ID+L+A+L L IP+D+D+ D +L+N D++ V
Sbjct: 131 EMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDISQDSILQNADEQTV 190
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTD+ILRLVPNI+NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVARICQ
Sbjct: 191 RSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQ 250
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA + L +FF V++QW+WP PVLL D + G VWDPR N DR H+MPIITP
Sbjct: 251 LYPNALPNMLASRFFRVYNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPKDRLHIMPIITP 310
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP NS++NVS ST IM EF++GK I E + K WD LFE FF Y++YL +
Sbjct: 311 AYPCMNSSYNVSASTLRIMTGEFQRGKEICEAMEANKADWDTLFEPFAFFEAYKNYLQID 370
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEI 446
S+ + D +W G +ES++R L +ER+ + L H +P + D +
Sbjct: 371 ISAANVNDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDAS------------ 418
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQATQSKMM 505
+ +F+GL +DI+ +
Sbjct: 419 ----------------RPLHCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLW 462
Query: 506 KDGMKIEVRHVKKKQLSEYL-PAHMLKKDKKTKSGDQNTSAKKR 548
GM+I V H+K++ L Y+ P + + D N ++ R
Sbjct: 463 IPGMEISVSHIKRRSLPNYVFPGGVRPSHTSKGTWDSNRRSEHR 506
>gi|334184470|ref|NP_001189603.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252670|gb|AEC07764.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 797
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 322/556 (57%), Gaps = 37/556 (6%)
Query: 9 SMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELS 68
S Q +P + +YG+T L+++ P+ D++R EL + L + E+ EE
Sbjct: 3 STQQRTDDDSSQPVKASLKSYGITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETM 62
Query: 69 SRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCV 128
R EV+ +++ +VK W+K+++ + + E I+TFGSYRLGVH ADID LCV
Sbjct: 63 RREEVVVRIDQIVKHWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCV 122
Query: 129 APRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI 187
P +V+R D+F F + L ++EVT+L+ V +A VPV+K F GI ID+L+A ++L I
Sbjct: 123 GPSYVNREEDFFIFFRDILAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVI 182
Query: 188 PDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYS 247
P D+D+ + +L ++D++ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YS
Sbjct: 183 PQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYS 242
Query: 248 NVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP 307
NV G+LGGV+WA+LVAR+CQ YPNA S LV +FF V++QW+WP PV+L + +L FP
Sbjct: 243 NVTGFLGGVNWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFP 302
Query: 308 VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMW 367
VWDPR N DRYHLMPIITPAYP NS++NVS ST +M E+F+ G TI ++I K W
Sbjct: 303 VWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHW 362
Query: 368 DKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVN 426
LF+ FF Y++YL + + AED L W G +ES+ R L +ER+ + + + H
Sbjct: 363 SSLFQQYMFFEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQ 422
Query: 427 PECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGL---DFIAANVILN 483
P Y DT+ + + +F+GL D
Sbjct: 423 PNEYVDTSKQFRHCA---------------------------FFMGLQRADGFGGQECQQ 455
Query: 484 LTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNT 543
+DI+ + + + GM + V HV+++QL ++ + K+ ++++ Q
Sbjct: 456 --FDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQSQQC 513
Query: 544 SAKKRKSDQALDELGD 559
+ D+ + L D
Sbjct: 514 ---REPGDEGVGSLSD 526
>gi|30682917|ref|NP_850071.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252668|gb|AEC07762.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 787
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 322/556 (57%), Gaps = 37/556 (6%)
Query: 9 SMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELS 68
S Q +P + +YG+T L+++ P+ D++R EL + L + E+ EE
Sbjct: 3 STQQRTDDDSSQPVKASLKSYGITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETM 62
Query: 69 SRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCV 128
R EV+ +++ +VK W+K+++ + + E I+TFGSYRLGVH ADID LCV
Sbjct: 63 RREEVVVRIDQIVKHWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCV 122
Query: 129 APRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI 187
P +V+R D+F F + L ++EVT+L+ V +A VPV+K F GI ID+L+A ++L I
Sbjct: 123 GPSYVNREEDFFIFFRDILAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVI 182
Query: 188 PDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYS 247
P D+D+ + +L ++D++ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YS
Sbjct: 183 PQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYS 242
Query: 248 NVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP 307
NV G+LGGV+WA+LVAR+CQ YPNA S LV +FF V++QW+WP PV+L + +L FP
Sbjct: 243 NVTGFLGGVNWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFP 302
Query: 308 VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMW 367
VWDPR N DRYHLMPIITPAYP NS++NVS ST +M E+F+ G TI ++I K W
Sbjct: 303 VWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHW 362
Query: 368 DKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVN 426
LF+ FF Y++YL + + AED L W G +ES+ R L +ER+ + + + H
Sbjct: 363 SSLFQQYMFFEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQ 422
Query: 427 PECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGL---DFIAANVILN 483
P Y DT+ + + +F+GL D
Sbjct: 423 PNEYVDTSKQFRHCA---------------------------FFMGLQRADGFGGQECQQ 455
Query: 484 LTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNT 543
+DI+ + + + GM + V HV+++QL ++ + K+ ++++ Q
Sbjct: 456 --FDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQSQQC 513
Query: 544 SAKKRKSDQALDELGD 559
+ D+ + L D
Sbjct: 514 ---REPGDEGVGSLSD 526
>gi|79323064|ref|NP_001031417.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252669|gb|AEC07763.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 786
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 322/556 (57%), Gaps = 37/556 (6%)
Query: 9 SMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELS 68
S Q +P + +YG+T L+++ P+ D++R EL + L + E+ EE
Sbjct: 3 STQQRTDDDSSQPVKASLKSYGITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETM 62
Query: 69 SRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCV 128
R EV+ +++ +VK W+K+++ + + E I+TFGSYRLGVH ADID LCV
Sbjct: 63 RREEVVVRIDQIVKHWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCV 122
Query: 129 APRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI 187
P +V+R D+F F + L ++EVT+L+ V +A VPV+K F GI ID+L+A ++L I
Sbjct: 123 GPSYVNREEDFFIFFRDILAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVI 182
Query: 188 PDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYS 247
P D+D+ + +L ++D++ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YS
Sbjct: 183 PQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYS 242
Query: 248 NVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP 307
NV G+LGGV+WA+LVAR+CQ YPNA S LV +FF V++QW+WP PV+L + +L FP
Sbjct: 243 NVTGFLGGVNWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFP 302
Query: 308 VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMW 367
VWDPR N DRYHLMPIITPAYP NS++NVS ST +M E+F+ G TI ++I K W
Sbjct: 303 VWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHW 362
Query: 368 DKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVN 426
LF+ FF Y++YL + + AED L W G +ES+ R L +ER+ + + + H
Sbjct: 363 SSLFQQYMFFEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQ 422
Query: 427 PECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGL---DFIAANVILN 483
P Y DT+ + + +F+GL D
Sbjct: 423 PNEYVDTSKQFRHCA---------------------------FFMGLQRADGFGGQECQQ 455
Query: 484 LTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNT 543
+DI+ + + + GM + V HV+++QL ++ + K+ ++++ Q
Sbjct: 456 --FDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQSQQC 513
Query: 544 SAKKRKSDQALDELGD 559
+ D+ + L D
Sbjct: 514 ---REPGDEGVGSLSD 526
>gi|148686801|gb|EDL18748.1| poly (A) polymerase alpha, isoform CRA_b [Mus musculus]
Length = 540
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/357 (56%), Positives = 248/357 (69%), Gaps = 28/357 (7%)
Query: 212 GCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPN 271
GCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVSWAMLVAR CQLYPN
Sbjct: 4 GCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPN 63
Query: 272 AAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQ 331
A ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPAYPQ
Sbjct: 64 AIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 123
Query: 332 QNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSV 391
QNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF KY+HY+VL+AS+
Sbjct: 124 QNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 183
Query: 392 SAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGK 451
+ + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 184 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF--------------------- 222
Query: 452 EEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKD 507
SP +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM +
Sbjct: 223 --PAPKESPDREEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL 280
Query: 508 GMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRP 563
MKI HVK+KQL + LP+H+L+K KK + G + T+ D ++D S P
Sbjct: 281 DMKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVP 337
>gi|18400958|ref|NP_565611.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|31747891|gb|AAF66438.2|AF255297_1 nuclear poly(A) polymerase [Arabidopsis thaliana]
gi|14532700|gb|AAK64151.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|18491197|gb|AAL69501.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|20197361|gb|AAC42245.2| putative poly(A) polymerase [Arabidopsis thaliana]
gi|330252667|gb|AEC07761.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 800
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 322/556 (57%), Gaps = 37/556 (6%)
Query: 9 SMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELS 68
S Q +P + +YG+T L+++ P+ D++R EL + L + E+ EE
Sbjct: 3 STQQRTDDDSSQPVKASLKSYGITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETM 62
Query: 69 SRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCV 128
R EV+ +++ +VK W+K+++ + + E I+TFGSYRLGVH ADID LCV
Sbjct: 63 RREEVVVRIDQIVKHWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCV 122
Query: 129 APRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI 187
P +V+R D+F F + L ++EVT+L+ V +A VPV+K F GI ID+L+A ++L I
Sbjct: 123 GPSYVNREEDFFIFFRDILAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVI 182
Query: 188 PDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYS 247
P D+D+ + +L ++D++ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YS
Sbjct: 183 PQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYS 242
Query: 248 NVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP 307
NV G+LGGV+WA+LVAR+CQ YPNA S LV +FF V++QW+WP PV+L + +L FP
Sbjct: 243 NVTGFLGGVNWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFP 302
Query: 308 VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMW 367
VWDPR N DRYHLMPIITPAYP NS++NVS ST +M E+F+ G TI ++I K W
Sbjct: 303 VWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHW 362
Query: 368 DKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVN 426
LF+ FF Y++YL + + AED L W G +ES+ R L +ER+ + + + H
Sbjct: 363 SSLFQQYMFFEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQ 422
Query: 427 PECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGL---DFIAANVILN 483
P Y DT+ + + +F+GL D
Sbjct: 423 PNEYVDTSKQFRHCA---------------------------FFMGLQRADGFGGQECQQ 455
Query: 484 LTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNT 543
+DI+ + + + GM + V HV+++QL ++ + K+ ++++ Q
Sbjct: 456 --FDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQSQQC 513
Query: 544 SAKKRKSDQALDELGD 559
+ D+ + L D
Sbjct: 514 ---REPGDEGVGSLSD 526
>gi|393246171|gb|EJD53680.1| polymerase [Auricularia delicata TFB-10046 SS5]
Length = 610
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/576 (41%), Positives = 344/576 (59%), Gaps = 40/576 (6%)
Query: 26 PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
P G+T ++ + P++ + + T L + L+ N E++EE +R VL +++ LV++++
Sbjct: 8 PTYLGVTPPISTAGPSKREEEVTVTLMQELRDQNRFESEEEARTREIVLGRVSALVRKFV 67
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
+VSIA+ + T A+ GGKI+T+GSYRLGVH G+DID LCV P+HV+R D+F F
Sbjct: 68 YKVSIARGMSETAAQAAGGKIFTYGSYRLGVHGPGSDIDTLCVVPKHVNREDFFDVFEPM 127
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
L+ ++ V ++ V EA+VP+IK I +D++FAR+AL + DD+DL DD +L+NLD++
Sbjct: 128 LRELEGVAEVSGVPEAYVPIIKTKISDIPLDLVFARVALSSVNDDLDLSDDNILRNLDER 187
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
CVRSL G R+TDEILRLVPN FR ALR IKLWA++ IYSNV G+LGGV+WAMLVARI
Sbjct: 188 CVRSLGGSRMTDEILRLVPNQAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARI 247
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYPNA A +V +FF++ +WKWP PVLLK+ + L VW+P++ +DR H MPII
Sbjct: 248 CQLYPNANAGVIVSRFFIIMREWKWPNPVLLKQIEEGPLQVRVWNPKLYPSDRAHRMPII 307
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TP YP ST NVS ST+ I++ E ++ I + I G W +LF +FF KYR+YL
Sbjct: 308 TPNYPSMCSTHNVSQSTQMIIKHELRRASEIVDRIIMGSATWSELFAKHDFFHKYRYYLQ 367
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDT--------TGVI 437
+IAS+ +A+ QL+W G +ES++R L+ LE + LAH + + T +
Sbjct: 368 VIASTENADLQLKWAGTVESRLRQLVMKLEYVDSLVLAHPFIKGFDQTHYLLTEEEVRFV 427
Query: 438 ANGSGSPEITAEGKEE-GGENTSPPVSGVASMWFIGLDF------IAANVILNLTYDIQH 490
A G S I+ KE+ G++ + V + ++IGL L+++Y
Sbjct: 428 AQGFVSDVISKRTKEDIEGKDGAQIV--YTTTFYIGLAIEPKQPGAVGPRKLDISYPTAE 485
Query: 491 FTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL-------PAHMLKKDKKTKSGDQN 542
FT V W+ M I VRH+K L +Y+ P LK+ K +KS N
Sbjct: 486 FTKLVKMWE----NFDDSKMGIVVRHIKSTMLPDYVFDPSERQPKQQLKRTKSSKSTSNN 541
Query: 543 TSA------KKRKSDQALDELGDKSRPRLDSDSNSL 572
A KKR+S + E PR +S ++L
Sbjct: 542 ADASPDMPNKKRRSSLNMSET-----PRSESALSAL 572
>gi|297825665|ref|XP_002880715.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326554|gb|EFH56974.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 788
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/582 (38%), Positives = 333/582 (57%), Gaps = 48/582 (8%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P +A TYG+T L+++ P D++R EL + L + E+ EE R EVL +++ +
Sbjct: 16 PVVKALKTYGITKPLSIAGPCAADVKRNLELEKFLVDEGLYESKEETMRREEVLVRIDQI 75
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYF 139
VK W+K+++ + + + I+TFGSYRLGVH ADID LCV P +V+R D+F
Sbjct: 76 VKHWVKQLTRQRGYTDQMVDDANAVIFTFGSYRLGVHGPRADIDTLCVGPSYVNREEDFF 135
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
+ L ++EVT+L+ V +A VPV+K F GI ID+L+A ++L IP D+D+ + +L
Sbjct: 136 IILRDMLAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVL 195
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
++D++ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YSNV G+LGGV+WA
Sbjct: 196 CDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWA 255
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
+LVAR+CQLYPNA S LV +FF V+ QW+WP PV+L + L FPVWDPR N DRY
Sbjct: 256 LLVARLCQLYPNAIPSMLVSRFFRVYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHRDRY 315
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP NS++NVS ST +M E+F+ G TI ++I K W LFE FF
Sbjct: 316 HLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQQWSSLFEQYMFFEA 375
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIA 438
Y++YL + ++ AED L W G +ES+ R L +ER+ + + + H P Y DT+
Sbjct: 376 YKNYLQVDVLALDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKKFR 435
Query: 439 NGSGSPEIT-AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHW 497
+ + + AEG GG+ +DI+ +
Sbjct: 436 HCAFFMGLQRAEGF--GGQECQ-------------------------QFDIRGTVDEFRQ 468
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTS------------- 544
+ + GM + V HV+++QL ++ K+ ++++ +Q
Sbjct: 469 EVNMYMFWRPGMDVYVSHVRRRQLPSFVFPKGYKRPRQSRHQNQQCREPGEGVVGSLSDS 528
Query: 545 ----AKKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNN 582
AK++ ++ +D +K R +SL D V+ +S+
Sbjct: 529 VDGYAKRKNDNETMDTRPEKREKRASRSPHSL-DAVSPVSSG 569
>gi|42567333|ref|NP_195011.4| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660727|gb|AEE86127.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 735
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/541 (39%), Positives = 315/541 (58%), Gaps = 32/541 (5%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P +P +YG+T L+L+ P+ D++R EL + L + E+ ++ R EVL +++ +
Sbjct: 13 PPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQI 72
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYF 139
VK W+K+++ + + E I+TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 73 VKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFF 132
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
+ L ++EVT+L V +A VPV+K F GI ID+L+A ++L +P D+D+ +L
Sbjct: 133 IILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVL 192
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+D+ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YSNV G+LGGV+WA
Sbjct: 193 CEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWA 252
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWD R N DRY
Sbjct: 253 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRY 312
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 313 HLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEA 372
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIA 438
Y++YL + + AED L W G +ES+ R L +ER+ + + + H P Y DT
Sbjct: 373 YKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFL 432
Query: 439 NGSGSPEIT-AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHW 497
+ + + AEG GG+ +DI+ +
Sbjct: 433 HCAFFMGLQRAEGV--GGQECQ-------------------------QFDIRGTVDEFRQ 465
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDEL 557
+ K GM + V HV+++QL ++ + ++ ++++ QN K D ++
Sbjct: 466 EVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRH--QNLPGGKSGEDGSVSHS 523
Query: 558 G 558
G
Sbjct: 524 G 524
>gi|42570181|ref|NP_849562.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|79610218|ref|NP_974670.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660726|gb|AEE86126.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660728|gb|AEE86128.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 738
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/541 (39%), Positives = 315/541 (58%), Gaps = 32/541 (5%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P +P +YG+T L+L+ P+ D++R EL + L + E+ ++ R EVL +++ +
Sbjct: 13 PPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQI 72
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYF 139
VK W+K+++ + + E I+TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 73 VKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFF 132
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
+ L ++EVT+L V +A VPV+K F GI ID+L+A ++L +P D+D+ +L
Sbjct: 133 IILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVL 192
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+D+ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YSNV G+LGGV+WA
Sbjct: 193 CEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWA 252
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWD R N DRY
Sbjct: 253 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRY 312
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 313 HLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEA 372
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIA 438
Y++YL + + AED L W G +ES+ R L +ER+ + + + H P Y DT
Sbjct: 373 YKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFL 432
Query: 439 NGSGSPEIT-AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHW 497
+ + + AEG GG+ +DI+ +
Sbjct: 433 HCAFFMGLQRAEGV--GGQECQ-------------------------QFDIRGTVDEFRQ 465
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDEL 557
+ K GM + V HV+++QL ++ + ++ ++++ QN K D ++
Sbjct: 466 EVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRH--QNLPGGKSGEDGSVSHS 523
Query: 558 G 558
G
Sbjct: 524 G 524
>gi|32527646|gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 737
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/541 (39%), Positives = 315/541 (58%), Gaps = 32/541 (5%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P +P +YG+T L+L+ P+ D++R EL + L + E+ ++ R EVL +++ +
Sbjct: 12 PPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQI 71
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYF 139
VK W+K+++ + + E I+TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 72 VKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFF 131
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
+ L ++EVT+L V +A VPV+K F GI ID+L+A ++L +P D+D+ +L
Sbjct: 132 IILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVL 191
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+D+ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YSNV G+LGGV+WA
Sbjct: 192 CEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWA 251
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWD R N DRY
Sbjct: 252 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRY 311
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 312 HLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEA 371
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIA 438
Y++YL + + AED L W G +ES+ R L +ER+ + + + H P Y DT
Sbjct: 372 YKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFL 431
Query: 439 NGSGSPEIT-AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHW 497
+ + + AEG GG+ +DI+ +
Sbjct: 432 HCAFFMGLQRAEGV--GGQECQ-------------------------QFDIRGTVDEFRQ 464
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDEL 557
+ K GM + V HV+++QL ++ + ++ ++++ QN K D ++
Sbjct: 465 EVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRH--QNLPGGKSGEDGSVSHS 522
Query: 558 G 558
G
Sbjct: 523 G 523
>gi|7270232|emb|CAB80002.1| putative poly(A) polymerase [Arabidopsis thaliana]
Length = 729
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/541 (39%), Positives = 315/541 (58%), Gaps = 32/541 (5%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P +P +YG+T L+L+ P+ D++R EL + L + E+ ++ R EVL +++ +
Sbjct: 12 PPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQI 71
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYF 139
VK W+K+++ + + E I+TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 72 VKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFF 131
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
+ L ++EVT+L V +A VPV+K F GI ID+L+A ++L +P D+D+ +L
Sbjct: 132 IILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVL 191
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+D+ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YSNV G+LGGV+WA
Sbjct: 192 CEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWA 251
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWD R N DRY
Sbjct: 252 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRY 311
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 312 HLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEA 371
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIA 438
Y++YL + + AED L W G +ES+ R L +ER+ + + + H P Y DT
Sbjct: 372 YKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFL 431
Query: 439 NGSGSPEIT-AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHW 497
+ + + AEG GG+ +DI+ +
Sbjct: 432 HCAFFMGLQRAEGV--GGQECQ-------------------------QFDIRGTVDEFRQ 464
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDEL 557
+ K GM + V HV+++QL ++ + ++ ++++ QN K D ++
Sbjct: 465 EVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRH--QNLPGGKSGEDGSVSHS 522
Query: 558 G 558
G
Sbjct: 523 G 523
>gi|42573143|ref|NP_974668.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660731|gb|AEE86131.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 730
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/541 (39%), Positives = 315/541 (58%), Gaps = 32/541 (5%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P +P +YG+T L+L+ P+ D++R EL + L + E+ ++ R EVL +++ +
Sbjct: 13 PPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQI 72
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYF 139
VK W+K+++ + + E I+TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 73 VKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFF 132
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
+ L ++EVT+L V +A VPV+K F GI ID+L+A ++L +P D+D+ +L
Sbjct: 133 IILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVL 192
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+D+ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YSNV G+LGGV+WA
Sbjct: 193 CEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWA 252
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWD R N DRY
Sbjct: 253 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRY 312
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 313 HLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEA 372
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIA 438
Y++YL + + AED L W G +ES+ R L +ER+ + + + H P Y DT
Sbjct: 373 YKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFL 432
Query: 439 NGSGSPEIT-AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHW 497
+ + + AEG GG+ +DI+ +
Sbjct: 433 HCAFFMGLQRAEGV--GGQECQ-------------------------QFDIRGTVDEFRQ 465
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDEL 557
+ K GM + V HV+++QL ++ + ++ ++++ QN K D ++
Sbjct: 466 EVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRH--QNLPGGKSGEDGSVSHS 523
Query: 558 G 558
G
Sbjct: 524 G 524
>gi|356522834|ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/565 (39%), Positives = 319/565 (56%), Gaps = 34/565 (6%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++L+ P D +T EL + L+ + E+ EE R EVL +L+ +VK W+K +S
Sbjct: 17 GITEPISLAGPTDDDAIKTLELEKYLQGVGLYESQEEAVVREEVLGRLDQIVKIWVKNIS 76
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSSFFEKLKT 148
AK + + KI+T GSYRLGVH GADID LCV PRH R D+F + L
Sbjct: 77 RAKGFNEQLVHEANAKIFTSGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGGLQKMLSE 136
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EVT+L V +A VPV+K F+G+ +D+L+ARLAL IP+D+D+ + +L+++D++ V
Sbjct: 137 MQEVTELHPVPDAHVPVVKFKFNGVSVDLLYARLALWVIPEDLDISQESILQSVDEQTVL 196
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD++LRLVPNI+ FR LR ++ WAK+ G+YSNV G+LGG++ A+LVARICQL
Sbjct: 197 SLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQL 256
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA LV +FF V++QW+WP PV+L + +LG PVWDPR N DRYHLMPIITP
Sbjct: 257 YPNALPDMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHLMPIITPV 316
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NST+NV+ ST +M +EF++G I E + K WD LFE FF Y++YL +
Sbjct: 317 YPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQIDI 376
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEIT 447
++ +A+D +W G + S++R L +ER+ + L H +P ++D
Sbjct: 377 TAENADDLRQWKGWVGSRLRQLTLKIERHTYGMLQCHPHPGEFSD--------------- 421
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQATQSKMMK 506
N+ P +F+GL V +DI+ + K
Sbjct: 422 ---------NSRP----FHHCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWK 468
Query: 507 DGMKIEVRHVKKKQLSEYL-PAHMLKKDKKTKSGDQNTSAKKRKSDQALDE--LGDKSRP 563
GM I V HVK+ + Y+ P + + + S+K R S E G K+
Sbjct: 469 PGMDIHVSHVKRSNIPNYIFPGGVRPTFPSKVTAENKQSSKSRASGHGQTEKPQGGKAVA 528
Query: 564 RLDSDSNSLSDKVNNISNNGDQSSS 588
D +N+ NN S S
Sbjct: 529 VGADDVRKRKRSEDNMDNNPRNSRS 553
>gi|186515708|ref|NP_001119103.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|227202692|dbj|BAH56819.1| AT4G32850 [Arabidopsis thaliana]
gi|332660735|gb|AEE86135.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/541 (39%), Positives = 315/541 (58%), Gaps = 32/541 (5%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P +P +YG+T L+L+ P+ D++R EL + L + E+ ++ R EVL +++ +
Sbjct: 13 PPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQI 72
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYF 139
VK W+K+++ + + E I+TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 73 VKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFF 132
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
+ L ++EVT+L V +A VPV+K F GI ID+L+A ++L +P D+D+ +L
Sbjct: 133 IILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVL 192
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+D+ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YSNV G+LGGV+WA
Sbjct: 193 CEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWA 252
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWD R N DRY
Sbjct: 253 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRY 312
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 313 HLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEA 372
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIA 438
Y++YL + + AED L W G +ES+ R L +ER+ + + + H P Y DT
Sbjct: 373 YKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFL 432
Query: 439 NGSGSPEIT-AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHW 497
+ + + AEG GG+ +DI+ +
Sbjct: 433 HCAFFMGLQRAEGV--GGQECQ-------------------------QFDIRGTVDEFRQ 465
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDEL 557
+ K GM + V HV+++QL ++ + ++ ++++ QN K D ++
Sbjct: 466 EVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRH--QNLPGGKSGEDGSVSHS 523
Query: 558 G 558
G
Sbjct: 524 G 524
>gi|30689510|ref|NP_849561.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60 [Arabidopsis thaliana]
gi|23308169|gb|AAN18054.1| At4g32850/T16I18_60 [Arabidopsis thaliana]
gi|332660730|gb|AEE86130.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 741
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/541 (39%), Positives = 315/541 (58%), Gaps = 32/541 (5%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P +P +YG+T L+L+ P+ D++R EL + L + E+ ++ R EVL +++ +
Sbjct: 13 PPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQI 72
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYF 139
VK W+K+++ + + E I+TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 73 VKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFF 132
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
+ L ++EVT+L V +A VPV+K F GI ID+L+A ++L +P D+D+ +L
Sbjct: 133 IILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVL 192
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+D+ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YSNV G+LGGV+WA
Sbjct: 193 CEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWA 252
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWD R N DRY
Sbjct: 253 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRY 312
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 313 HLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEA 372
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIA 438
Y++YL + + AED L W G +ES+ R L +ER+ + + + H P Y DT
Sbjct: 373 YKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFL 432
Query: 439 NGSGSPEIT-AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHW 497
+ + + AEG GG+ +DI+ +
Sbjct: 433 HCAFFMGLQRAEGV--GGQECQ-------------------------QFDIRGTVDEFRQ 465
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDEL 557
+ K GM + V HV+++QL ++ + ++ ++++ QN K D ++
Sbjct: 466 EVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRH--QNLPGGKSGEDGSVSHS 523
Query: 558 G 558
G
Sbjct: 524 G 524
>gi|356515639|ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 732
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/521 (41%), Positives = 309/521 (59%), Gaps = 32/521 (6%)
Query: 7 SNSMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEE 66
S S ++ PHQ + QA YG T L+L+ P DLQR +L + L + E++EE
Sbjct: 6 SPSGGSTPPHQ----EQQANSKYGFTKPLSLAGPTDADLQRNNDLDKFLLDSGLYESNEE 61
Query: 67 LSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDAL 126
++R EVL +L+ +VK W+K+++ + + E I+TFGSYRLGVH G DID L
Sbjct: 62 SAARKEVLHRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTL 121
Query: 127 CVAPRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALK 185
C+ P +V+R D+F L ++EV++L+ V +A VPV+K F GI ID+L+A ++L
Sbjct: 122 CIGPSYVNREEDFFIILHNILAEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLL 181
Query: 186 EIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGI 245
+P+D+D+ +L ++D+ VRSLNGCRV D+IL+LVPN+E+FR LR +K WAK+ G+
Sbjct: 182 VVPEDLDISHGSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGV 241
Query: 246 YSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLG 305
YSNV G+LGGV+WA+LVARICQLYPNA S LV +FF V++QW+WP PV+L + LG
Sbjct: 242 YSNVTGFLGGVNWAILVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELG 301
Query: 306 FPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKT 365
FP+WDPR N DR+H MPIITPAYP NS++NVS ST +M ++F G I ++I K
Sbjct: 302 FPIWDPRRNPRDRFHTMPIITPAYPCMNSSYNVSASTLRVMVDQFCYGNKICDEIELNKA 361
Query: 366 MWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AH 424
W LF+ FF Y++YL + + +D L W G +ES++R L +ER+ + L H
Sbjct: 362 QWSALFQPYIFFEAYKNYLQVDIIASDTDDLLAWRGWVESRLRMLTLKIERDTNGMLQCH 421
Query: 425 VNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNL 484
P Y DT+ A+ S ++EG V G F
Sbjct: 422 PYPHEYVDTSKPCAH---SAFFMGLQRKEG-------VRGQEGQQF-------------- 457
Query: 485 TYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYL 525
DI+ + + K GM I V HV++KQL ++
Sbjct: 458 --DIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFV 496
>gi|42573145|ref|NP_974669.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|186515704|ref|NP_001119102.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|222422953|dbj|BAH19461.1| AT4G32850 [Arabidopsis thaliana]
gi|332660729|gb|AEE86129.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660734|gb|AEE86134.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/541 (39%), Positives = 315/541 (58%), Gaps = 32/541 (5%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P +P +YG+T L+L+ P+ D++R EL + L + E+ ++ R EVL +++ +
Sbjct: 13 PPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQI 72
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYF 139
VK W+K+++ + + E I+TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 73 VKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFF 132
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
+ L ++EVT+L V +A VPV+K F GI ID+L+A ++L +P D+D+ +L
Sbjct: 133 IILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVL 192
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+D+ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YSNV G+LGGV+WA
Sbjct: 193 CEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWA 252
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWD R N DRY
Sbjct: 253 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRY 312
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 313 HLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEA 372
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIA 438
Y++YL + + AED L W G +ES+ R L +ER+ + + + H P Y DT
Sbjct: 373 YKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFL 432
Query: 439 NGSGSPEIT-AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHW 497
+ + + AEG GG+ +DI+ +
Sbjct: 433 HCAFFMGLQRAEGV--GGQECQ-------------------------QFDIRGTVDEFRQ 465
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDEL 557
+ K GM + V HV+++QL ++ + ++ ++++ QN K D ++
Sbjct: 466 EVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRH--QNLPGGKSGEDGSVSHS 523
Query: 558 G 558
G
Sbjct: 524 G 524
>gi|256066067|ref|XP_002570474.1| poly(A) polymerase [Schistosoma mansoni]
gi|350644967|emb|CCD60333.1| poly(A) polymerase, putative [Schistosoma mansoni]
Length = 496
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/449 (44%), Positives = 285/449 (63%), Gaps = 28/449 (6%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G T AL+ P + D + T+EL L N+ ET EE+S R E L +L + WI++ +
Sbjct: 17 GETGALSFKKPTEQDFRDTQELEASLAQLNIFETQEEISQRREALVRLQEISNAWIRQKA 76
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+ +N+P VA GKI+TFGSYRLGV+ +GADID+L V PR + R ++FS F L
Sbjct: 77 LEQNLPAHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITREEFFSDFQTVLAEN 136
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRD--DMLLKNLDQKCV 207
V DL AV +AFVPV+KM F G+EID+LFA++ IP++ L + ++L++N+D++ V
Sbjct: 137 SNVEDLHAVVDAFVPVLKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNMDERDV 196
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RS+NG RVT++IL LV N +F++AL+ I++WAK+ +YSN LG+LGGVSWA+LV+RICQ
Sbjct: 197 RSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILVSRICQ 256
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNV-NLGFPVWDPRVNVADRYHLMPIIT 326
LYP A S +V FF +FSQW WP+PV L++ + + +L PVWDPR+N +D+YHLMPI+T
Sbjct: 257 LYPYATPSMIVYLFFTIFSQWPWPKPVRLRECEYIASLCLPVWDPRLNPSDQYHLMPILT 316
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVL 386
P+YP QNST+NV S R I++ E KQG + K W LFE FF +YRHY+V+
Sbjct: 317 PSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKGSWSNLFEAA-FFFQYRHYVVV 375
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEI 446
I + +E CGL+ES++R L+ N E N ++ +AHVN Y
Sbjct: 376 IVVGNTKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHVNCHAY---------------- 419
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGLDF 475
G+ S + WFIG++F
Sbjct: 420 --------GKGPSDDDANFVRKWFIGMEF 440
>gi|79326212|ref|NP_001031779.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660733|gb|AEE86133.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 765
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/541 (39%), Positives = 315/541 (58%), Gaps = 32/541 (5%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P +P +YG+T L+L+ P+ D++R EL + L + E+ ++ R EVL +++ +
Sbjct: 13 PPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQI 72
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYF 139
VK W+K+++ + + E I+TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 73 VKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFF 132
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
+ L ++EVT+L V +A VPV+K F GI ID+L+A ++L +P D+D+ +L
Sbjct: 133 IILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVL 192
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+D+ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YSNV G+LGGV+WA
Sbjct: 193 CEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWA 252
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWD R N DRY
Sbjct: 253 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRY 312
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 313 HLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEA 372
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIA 438
Y++YL + + AED L W G +ES+ R L +ER+ + + + H P Y DT
Sbjct: 373 YKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFL 432
Query: 439 NGSGSPEIT-AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHW 497
+ + + AEG GG+ +DI+ +
Sbjct: 433 HCAFFMGLQRAEGV--GGQECQ-------------------------QFDIRGTVDEFRQ 465
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDEL 557
+ K GM + V HV+++QL ++ + ++ ++++ QN K D ++
Sbjct: 466 EVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRH--QNLPGGKSGEDGSVSHS 523
Query: 558 G 558
G
Sbjct: 524 G 524
>gi|79326203|ref|NP_001031778.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660732|gb|AEE86132.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 716
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/541 (39%), Positives = 315/541 (58%), Gaps = 32/541 (5%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P +P +YG+T L+L+ P+ D++R EL + L + E+ ++ R EVL +++ +
Sbjct: 13 PPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQI 72
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYF 139
VK W+K+++ + + E I+TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 73 VKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFF 132
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
+ L ++EVT+L V +A VPV+K F GI ID+L+A ++L +P D+D+ +L
Sbjct: 133 IILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVL 192
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+D+ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YSNV G+LGGV+WA
Sbjct: 193 CEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWA 252
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWD R N DRY
Sbjct: 253 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRY 312
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 313 HLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEA 372
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDTTGVIA 438
Y++YL + + AED L W G +ES+ R L +ER+ + + + H P Y DT
Sbjct: 373 YKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFL 432
Query: 439 NGSGSPEIT-AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHW 497
+ + + AEG GG+ +DI+ +
Sbjct: 433 HCAFFMGLQRAEGV--GGQECQ-------------------------QFDIRGTVDEFRQ 465
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDEL 557
+ K GM + V HV+++QL ++ + ++ ++++ QN K D ++
Sbjct: 466 EVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRH--QNLPGGKSGEDGSVSHS 523
Query: 558 G 558
G
Sbjct: 524 G 524
>gi|167998971|ref|XP_001752191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696586|gb|EDQ82924.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/498 (43%), Positives = 307/498 (61%), Gaps = 29/498 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + P ++D T++L EC+K + + EE R EVL +L+ LV W+K +S
Sbjct: 8 GVTEPISTADPTEVDYVNTKQLEECVKGLALQGSREEEVRREEVLGRLDELVNVWVKSMS 67
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKT 148
K + + KI+TFGSYRLGVH GADID LCV P +V R D+F + L+
Sbjct: 68 RKKGLNDEYVREARCKIFTFGSYRLGVHGPGADIDTLCVGPCYVTREEDFFVELHDLLQK 127
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ VT+L V +A VPV+ F+GI ID+L+ARL L IP+++D+ D +L+N+D++ VR
Sbjct: 128 TEGVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQDTILQNVDEQSVR 187
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD ILRLVPN+E+FR LR +KLWAK+ G+YSNV+G+LGGV+WA+LVARICQL
Sbjct: 188 SLNGCRVTDRILRLVPNMEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWALLVARICQL 247
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA S L+ +FF V+ QW+WP PV+L + LG PVWDPR N DR HLMPIITP
Sbjct: 248 YPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGPLGLPVWDPRRNPRDRSHLMPIITPT 307
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP QNS+FNVS ST +M EEFK+G +I + + + W KLFE FF Y++YL +
Sbjct: 308 YPCQNSSFNVSNSTLRVMTEEFKRGDSICDSLDSKVADWSKLFEPYPFFESYKNYLQIDI 367
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEIT 447
S+ ED W G +ES++R LI +E++ L H +P + DT+ + S
Sbjct: 368 SAGDEEDLRIWKGWVESRLRQLILKVEKDTFGALQCHPHPSAFHDTSKRVQVCSF---FV 424
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKD 507
A +++G +S P ++ + I F ++V+ Q + K
Sbjct: 425 ALQRKQGAPPSSTP--------------------FDMCHTIAEFKHSVN----QYLLWKP 460
Query: 508 GMKIEVRHVKKKQLSEYL 525
MKI V HV+ KQ+ Y+
Sbjct: 461 TMKIHVSHVRPKQIPTYV 478
>gi|430811842|emb|CCJ30698.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 639
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/396 (49%), Positives = 275/396 (69%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++++ P + ++ L + LK E+ EE R +VL +L + E++++V
Sbjct: 62 WGVTPPVSMAGPTEHEIAVNAALIDELKLRKNFESPEESDKRAKVLGELQKITLEFVQKV 121
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S+ K++ ++A GGKI+T+GSYRLGV+ G+DID L V PRHV R ++F+ F + L+
Sbjct: 122 SLDKHMTESMARDAGGKIFTYGSYRLGVYSPGSDIDTLMVVPRHVTRENFFTDFEQILRN 181
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
EVT + AV +A+VP+IK F GI ID++FARLAL ++P D+ L D+ LLKN++++CV
Sbjct: 182 RPEVTGITAVPDAYVPIIKFKFSGIPIDLIFARLALAQVPMDLTLEDNNLLKNVEERCVL 241
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RVTDEILRLVPN F+ ALR IKLWA++ IYSNV+G+ GGV+WAMLVARICQL
Sbjct: 242 SLNGTRVTDEILRLVPNPTIFKHALRAIKLWAQQRAIYSNVMGFPGGVAWAMLVARICQL 301
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ ++ KFF + SQWKWPQPVLLK ++ L VW+P++ D+ H MPIITPA
Sbjct: 302 YPNAVSAVVIAKFFRILSQWKWPQPVLLKPIEDGPLQVRVWNPKIYKGDQAHRMPIITPA 361
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP ST N++ ST+ ++ E + I++ I NG W LF FF +Y++YLV++A
Sbjct: 362 YPSMCSTHNITESTQKVIINEMNRAGDIADKILNGTLPWSTLFAKHTFFHQYKYYLVIVA 421
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+S SAE QL+W GL+ESKVR L+ LE I LAH
Sbjct: 422 ASKSAEMQLKWSGLVESKVRQLVLRLEYVDEIKLAH 457
>gi|302770018|ref|XP_002968428.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
gi|300164072|gb|EFJ30682.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
Length = 534
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/538 (40%), Positives = 311/538 (57%), Gaps = 41/538 (7%)
Query: 35 LNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNI 94
L+ + P DL RTR+L + L ++E+ EE R VL +L+ +VK W++++ + K
Sbjct: 4 LSTAGPTPADLGRTRDLEKLLSNAGLNESREEAMKREGVLGRLDQIVKSWVRQICVNKGF 63
Query: 95 PPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKTVDEVT 153
V ++ KI+TFGSYRLGVH G+DID LCV P H R D+F L + VT
Sbjct: 64 SNEVVQEANAKIFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAETENVT 123
Query: 154 DLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGC 213
+L V EA VPV+K FDGI ID+L+ARL+ IP+D+D+ D+ +++NLD++ V SLNGC
Sbjct: 124 ELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLSLNGC 183
Query: 214 RVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA 273
RVTD+ILRLVPNI++FR LR +K WAK+ G+YSNV G+LGG++WA+LVARICQLYPNA
Sbjct: 184 RVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLYPNAV 243
Query: 274 ASTLVCKFFLVFSQWKWPQPVLLKK-PDNVNLG-FPVWDPRVNVADRYHLMPIITPAYPQ 331
STLV +FF V++QW+WP PV+L + +LG VWDPR N D+ HLMPIITPAYP
Sbjct: 244 PSTLVSRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAYPC 303
Query: 332 QNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSV 391
NS++NVS ST IM +EF +G + E + + WD LFE+ +FF YR+YL + ++
Sbjct: 304 MNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESFSFFEAYRNYLQIDVVAI 363
Query: 392 SAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEITAEG 450
D W G +ES++R L +E++ + L H +P + D
Sbjct: 364 DDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMAR--------------- 408
Query: 451 KEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQATQSKMMKDGM 509
G +F+GL + A + +DI+ K GM
Sbjct: 409 ------------DGYHCAYFMGLQRKLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKPGM 456
Query: 510 KIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRLDS 567
+I V HV++KQ+ ++ +K + + + S+ ++ D SR RL S
Sbjct: 457 EIYVSHVRRKQIPLFVYPGGVKPARPARQHSGSPSSDSKQGD---------SRKRLTS 505
>gi|302774344|ref|XP_002970589.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
gi|300162105|gb|EFJ28719.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
Length = 534
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/538 (40%), Positives = 311/538 (57%), Gaps = 41/538 (7%)
Query: 35 LNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNI 94
L+ + P DL RTR+L + L ++E+ EE R VL +L+ +VK W++++ + K
Sbjct: 4 LSTAGPTPADLGRTRDLEKLLSNAGLNESREEAMKREGVLGRLDQIVKSWVRQICVNKGF 63
Query: 95 PPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKTVDEVT 153
V ++ KI+TFGSYRLGVH G+DID LCV P H R D+F L + VT
Sbjct: 64 SNEVVQEANAKIFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAETENVT 123
Query: 154 DLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGC 213
+L V EA VPV+K FDGI ID+L+ARL+ IP+D+D+ D+ +++NLD++ V SLNGC
Sbjct: 124 ELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLSLNGC 183
Query: 214 RVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA 273
RVTD+ILRLVPNI++FR LR +K WAK+ G+YSNV G+LGG++WA+LVARICQLYPNA
Sbjct: 184 RVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLYPNAV 243
Query: 274 ASTLVCKFFLVFSQWKWPQPVLLKK-PDNVNLG-FPVWDPRVNVADRYHLMPIITPAYPQ 331
STL+ +FF V++QW+WP PV+L + +LG VWDPR N D+ HLMPIITPAYP
Sbjct: 244 PSTLISRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAYPC 303
Query: 332 QNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSV 391
NS++NVS ST IM +EF +G + E + + WD LFE+ +FF YR+YL + ++
Sbjct: 304 MNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESFSFFEAYRNYLQIDVVAI 363
Query: 392 SAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEITAEG 450
D W G +ES++R L +E++ + L H +P + D
Sbjct: 364 DDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMAR--------------- 408
Query: 451 KEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQATQSKMMKDGM 509
G +F+GL + A + +DI+ K GM
Sbjct: 409 ------------DGYHCAYFMGLQRKLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKQGM 456
Query: 510 KIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRLDS 567
+I V HV++KQ+ ++ +K + + + S+ ++ D SR RL S
Sbjct: 457 EIYVSHVRRKQIPLFVYPGGVKPARPARQHSGSPSSDSKQGD---------SRKRLTS 505
>gi|62202042|gb|AAH92668.1| Papolb protein [Danio rerio]
Length = 283
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/281 (69%), Positives = 231/281 (82%), Gaps = 9/281 (3%)
Query: 7 SNSMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEE 66
++ +QT++P P YG+T+ ++L+PP + DL TR+L E L+P+ V E + E
Sbjct: 6 TSQVQTAQP---------TPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELE 56
Query: 67 LSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDAL 126
L R+ VL KLN LVK WI+EVS AKNIP +V + VGGKI+TFGSYRLGVH KGADIDAL
Sbjct: 57 LQRRILVLGKLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDAL 116
Query: 127 CVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKE 186
CVAPRHV+R D+FSSF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+
Sbjct: 117 CVAPRHVERTDFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQT 176
Query: 187 IPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIY 246
IP+++DLRDD LLKNLD +C+RSLNGCRVTDEIL LVPNIENFRL LR IKLWAK+H IY
Sbjct: 177 IPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIY 236
Query: 247 SNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQ 287
SN+LG+LGGVSWAMLVAR CQLYPNA A+TLV KFFLVFS+
Sbjct: 237 SNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSK 277
>gi|413926072|gb|AFW66004.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 680
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/514 (41%), Positives = 300/514 (58%), Gaps = 27/514 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G L+L+ P DLQRT EL + L + E EE + R +VLS++ +VKEW+K+++
Sbjct: 21 GTDPPLSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLSEIGLIVKEWVKQLT 80
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKT 148
K + E+ ++TFGSYRLGVH GADID LCV P +V+R D+F + L
Sbjct: 81 RKKGYAEQLVEQANAILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVTLHGILAE 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV +L+ V +A VPV+K F GI ID+L+A ++L IP D D+ +L ++D+ VR
Sbjct: 141 KEEVAELQPVPDAHVPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCDVDEATVR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRV D+ILRLVPN+ENFR LR +K WAK+ G+YSN+ G+LGGV+WA+LVAR+CQL
Sbjct: 201 SLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVARVCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA S LV +FF VF+QW+WP PV+L +N +LGF +WDPR N DR HLMPIITPA
Sbjct: 261 YPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVS ST ++ E+F+ G + ++I K W+ LFE +FF YR +LV+
Sbjct: 321 YPCMNSSYNVSTSTLRVIMEQFQFGNKVCQEIELNKANWNALFEPFHFFEAYRKFLVVDI 380
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
+ +D W G IES++R L +ER DT G++
Sbjct: 381 VAEDDDDLRLWKGWIESRLRQLTLKIER---------------DTKGIL----------- 414
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKDG 508
+ E + P + +++GL +DI+ + + + K G
Sbjct: 415 QCHPYPCEYSDPTIECAHCAFYMGLSRKEGLKKRGQQFDIRGTVDEFMREIGMYSLWKPG 474
Query: 509 MKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQN 542
M + V HV ++Q+ Y+ KK T +Q
Sbjct: 475 MDLAVTHVHREQVPSYVFEQGYKKPCPTMHANQQ 508
>gi|357124126|ref|XP_003563757.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 700
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/546 (40%), Positives = 316/546 (57%), Gaps = 50/546 (9%)
Query: 31 MTTA---LNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
MTT+ L+L+ P D+QRT EL + L + E+ E + R EVL +L+ +VK+W+K+
Sbjct: 1 MTTSNKPLSLAGPVDADIQRTAELNKFLVEAGLYESAHESARREEVLGELDKIVKDWVKQ 60
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKL 146
++ + + E ++TFGSYRLGVH GAD+D LCV P +V+R D+F + L
Sbjct: 61 LTSQRGYTDQMVEDANAVLFTFGSYRLGVHGPGADVDTLCVGPSYVNREEDFFIVLHDIL 120
Query: 147 KTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKC 206
+EVT+L+ V +A VPV+K F GI ID+L+A ++L +P D+D+ + +L ++D+
Sbjct: 121 AQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQESVLYDIDEAT 180
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARIC 266
VRSLNGCRV D+ILRLVPNIENFR LR +K WAK+ G+YSNV G+LGGV+WA+LVAR+C
Sbjct: 181 VRSLNGCRVADQILRLVPNIENFRTTLRCLKHWAKRRGVYSNVTGFLGGVNWALLVARVC 240
Query: 267 QLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIIT 326
QLYPNA S LV +FF VF+QW+WP PV+L + LGFPVWDPR N DR H MPIIT
Sbjct: 241 QLYPNAVPSMLVSRFFRVFTQWRWPNPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIIT 300
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVL 386
PAYP NS++NVS ST +M E+F+ G I ++I K W LFE+ FF Y++YL +
Sbjct: 301 PAYPCMNSSYNVSTSTLRVMIEQFQFGNKICQEIELNKANWPALFESFQFFEAYKNYLQV 360
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPE 445
+ ED W G +ES++R L +ER+ + L H P Y D + A+ +
Sbjct: 361 DIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCA---- 416
Query: 446 ITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQATQSKM 504
+F+GL + + +DI+ +
Sbjct: 417 -----------------------FFMGLSRNVGVKIEEGQQFDIRGTVDEFRHDINMYMF 453
Query: 505 MKDGMKIEVRHVKKKQLSEYL-------------PAHMLKKDKK-TKSGDQNTSAK---K 547
K GM++ V HV++K++ Y+ +H + DK T++G+ S K
Sbjct: 454 WKPGMELAVSHVRRKEIPAYVFPEGYRRPRPQRHVSHQQQSDKNDTENGNMTGSPDGQLK 513
Query: 548 RKSDQA 553
RK D A
Sbjct: 514 RKHDSA 519
>gi|213406289|ref|XP_002173916.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
gi|212001963|gb|EEB07623.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
Length = 563
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/396 (46%), Positives = 272/396 (68%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ +PP + + L LK N+ E+ ++ R+ VL +L + E++++V
Sbjct: 6 WGITPPISTAPPTEKENALNTALVNELKAQNLFESAQDSEKRVRVLQELQAITTEFVRKV 65
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S++K++ +A + GGKI+T+GSYRLGV+ G+DID L V P+HV R ++F L+
Sbjct: 66 SLSKHMSEKMASESGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSRENFFQDLEPMLRA 125
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
E+TDL AV EA+VP+IK F GI ID++FARL++ +P D++L D LLK ++++C+
Sbjct: 126 RPEITDLAAVPEAYVPIIKFKFLGISIDLIFARLSIPRVPLDLELSDSNLLKGVEERCIL 185
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RVTD+IL+LVPN F+ ALR IK WA++ IY+NV+G+ GGV+WAM+VARICQL
Sbjct: 186 SLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARICQL 245
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ +V KFF + SQW WPQPVLLK D+ L VW+P++ +D+ H MPIITPA
Sbjct: 246 YPNAVSAVIVSKFFRILSQWNWPQPVLLKPIDDGPLQVRVWNPKLYPSDKAHRMPIITPA 305
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N++ ST+T++ E + I +DI GK W LFE +FF +YR+YL + A
Sbjct: 306 YPSMCATHNITPSTQTVILREMARAGLIVDDIMAGKKPWSALFEKHDFFHRYRYYLTVTA 365
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+S +A+ QL+W GL+ESK+RH + LE I LAH
Sbjct: 366 ASKTADSQLKWSGLVESKLRHFVTRLELVDAITLAH 401
>gi|390601592|gb|EIN10986.1| Poly(A) polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 582
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/550 (42%), Positives = 323/550 (58%), Gaps = 35/550 (6%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T +++ + + T L E LK E +EE +R VL ++ LVK+ + E+S
Sbjct: 9 GVTAPISVMESTTREKEVTITLLEELKKQKTIEGEEEARTREIVLGRVAALVKKCVHEIS 68
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+A + + A GGKI+TFGSYRLGVH G+DID LCV P+HV R ++F F +L+ +
Sbjct: 69 LANGLSESAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSREEWFDVFERRLREM 128
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
D VT++ V EAFVPVIK GI ID ARLAL IP+D+DL DD LL+NLD++CVRS
Sbjct: 129 DGVTEVSGVPEAFVPVIKAKVLGIPIDFTMARLALSSIPEDLDLSDDNLLRNLDERCVRS 188
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNG RVTD ILRLVP + FR+ALR IKLWA + IYSNV G+LGGV+WAMLVAR+CQLY
Sbjct: 189 LNGSRVTDAILRLVPEVNVFRVALRCIKLWATRKAIYSNVNGFLGGVAWAMLVARVCQLY 248
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNA A +V +FF++ QWKWPQPVLLK + L VW+P++ DR H MPIITPAY
Sbjct: 249 PNACAGAIVSRFFIIMYQWKWPQPVLLKTIEEGPLNVRVWNPKLYPTDRAHRMPIITPAY 308
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P +T NV ST+ I+ EE K+G + E I G W +LF +FF KYR+YL +IAS
Sbjct: 309 PAMCATHNVMASTQMIITEELKKGSELVEKIIVGTADWSELFIKHDFFDKYRYYLQVIAS 368
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAE 449
+ +A+ QL+W G +ES++R L+ LE + LAH + + + +++ E+ A
Sbjct: 369 TGNADLQLKWSGTVESRIRQLVMKLEYVDSLTLAHPFIKGFEQVSYCLSD----EEVRAV 424
Query: 450 GKEEGGENTSPPV-------SGVASMW----FIGLDFIAAN------VILNLTYDIQHFT 492
+ E E V G ++++ +IGL L+++Y FT
Sbjct: 425 AQGEISETVKKRVLEDIKDKEGASTVYTTTFYIGLAIEPKQPGSNGPRKLDISYPTTEFT 484
Query: 493 NAVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSD 551
V W+ K + M I VRH++ L +Y+ + G Q K+ K+
Sbjct: 485 KLVKMWE----KFDEAKMGIVVRHIRHTALPDYVFG---------EGGRQTRPQKRPKTS 531
Query: 552 QALDELGDKS 561
+ + G+ S
Sbjct: 532 KNSGQSGNTS 541
>gi|168067163|ref|XP_001785494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662901|gb|EDQ49701.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/498 (43%), Positives = 307/498 (61%), Gaps = 29/498 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + P ++D T++L E +K + + EE R EVL L+ LV W+K VS
Sbjct: 12 GVTEPISTADPTEVDYANTKQLEEFVKGLALQGSREEEVRREEVLGLLDELVNVWVKMVS 71
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKT 148
K + + KI+TFGSYRLGVH GADID LCV P +V R D+F + L+
Sbjct: 72 RMKGLNDEYVREARCKIFTFGSYRLGVHGPGADIDTLCVGPCYVTREEDFFVELHDLLQK 131
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D VT+L V +A VPV+ F+GI ID+L+ARL L IP+++D+ D +L+N+D++ VR
Sbjct: 132 TDGVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQDSILQNVDEQSVR 191
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTD ILRLVPNIE+FR LR +KLWAK+ G+YSNV+G+LGGV+WA+LVARICQL
Sbjct: 192 SLNGCRVTDRILRLVPNIEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWALLVARICQL 251
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA S L+ +FF V+ QW+WP PV+L + +LG P+WDPR N DR HLMPIITP
Sbjct: 252 YPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGSLGLPIWDPRKNPRDRSHLMPIITPT 311
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP QNS+FNVS ST +M EEFK+G + + + + W KLFE FF Y++YL +
Sbjct: 312 YPCQNSSFNVSNSTLRVMTEEFKRGDGVCDSLDSKVADWSKLFEPYPFFESYKNYLQIEI 371
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEIT 447
++ ED W G +ES++R LI +E++ L H +P + DT+ + S
Sbjct: 372 TAGDEEDLRIWKGWVESRLRQLILKVEKDTFGMLQCHPHPNAFHDTSKKVQVCSF---FV 428
Query: 448 AEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKD 507
A +++G +++S P ++ + I F ++V+ Q + K
Sbjct: 429 ALQRKQGAQHSSTP--------------------FDMCHTIAEFKHSVN----QYLLWKP 464
Query: 508 GMKIEVRHVKKKQLSEYL 525
MKI V HV+ KQ+ Y+
Sbjct: 465 TMKIGVSHVRPKQIPTYV 482
>gi|255550972|ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta, putative [Ricinus communis]
Length = 754
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/518 (40%), Positives = 309/518 (59%), Gaps = 28/518 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++L+ P++ DL R +L + L + E+ EE R EVL +++ +VK+WIK++
Sbjct: 27 YGITKPISLAGPSEADLLRNADLVKFLVDSGLYESKEENLKREEVLCRIDQIVKDWIKQL 86
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLK 147
+ + + ++ I+TFGSYRLGVH GADID LCV P +V+R D+F + L
Sbjct: 87 TRQRGYSDQMVDEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFILLHDILA 146
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+DE+T+L+ V +A VPV+K F GI ID+L+A ++L +P+D+D+ +L ++D++ V
Sbjct: 147 EMDEITELQPVPDAHVPVMKFKFQGISIDLLYASISLPVVPEDLDISHGSVLYDVDEQTV 206
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRV D+IL+LVPN+E+FR LR +K WAK+ G+YSNV G+LGGV+WA+LVAR+CQ
Sbjct: 207 RSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARLCQ 266
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA S LV +FF V++QW+WP PV+L + LGFPVWDPR N DR+H MPIITP
Sbjct: 267 LYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHMPIITP 326
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP NS++NVSIST +M E+F+ G I E+I K W LFE FF Y++YL +
Sbjct: 327 AYPCMNSSYNVSISTLRVMMEQFQYGNKICEEIELNKAQWSALFEPYLFFEAYKNYLQID 386
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEI 446
+ A+D L W G +ES++R L +ER+ L H P Y DT+ + +
Sbjct: 387 IIAADADDLLAWKGWVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTSKQCPHCAF---F 443
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMK 506
+ +G VSG F DI+ + K
Sbjct: 444 MGLQRRKG-------VSGQEGQQF----------------DIRGTVEEFRQEINMYMFWK 480
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTS 544
GM + V H +++QL ++ K+ + ++ +Q
Sbjct: 481 PGMDVYVSHARRRQLPAFVFPDGYKRSRTSRHPNQQAG 518
>gi|242061050|ref|XP_002451814.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
gi|241931645|gb|EES04790.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
Length = 672
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/514 (40%), Positives = 301/514 (58%), Gaps = 27/514 (5%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G L+L+ P DLQRT EL + L + E EE + R +VL ++ +VKEW+K+++
Sbjct: 21 GTDPPLSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLCEIGQIVKEWVKQLT 80
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKT 148
K + E+ ++TFGSYRLGVH ADID LCV P +V+R D+F + L
Sbjct: 81 SKKGYADQLVEQANAVLFTFGSYRLGVHGPEADIDTLCVGPSYVNREEDFFVTLHGILAE 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EVT+L+ V +A VPV+K F GI ID+L+A L+L IP D D+ +L ++D+ VR
Sbjct: 141 KEEVTELQPVPDAHVPVLKFKFRGISIDLLYASLSLSVIPADFDISQGSVLCDVDEATVR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRV D+ILRLVPN+ENFR LR +K WAK+ G+YSN+ G+LGGV+WA+LVAR+CQL
Sbjct: 201 SLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVARVCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA S LV +FF VF+QW+WP PV+L +N +LGF +WDPR N DR HLMPIITPA
Sbjct: 261 YPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NS++NVS ST ++ E+F+ G I ++I K W+ LFE +FF YR +LV+
Sbjct: 321 YPCMNSSYNVSSSTLRVIMEQFQFGNKICQEIELNKANWNALFEPFHFFEAYRKFLVVDI 380
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
+ + +D W G IES++R L ++R DT G++
Sbjct: 381 VAENDDDLRLWKGWIESRLRQLTLKIDR---------------DTKGIL----------- 414
Query: 449 EGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKDG 508
+ E + P + +++GL + +DI+ + + + G
Sbjct: 415 QCHPYPCEYSDPTIECAHCAFYMGLSRKEGSKKRGQQFDIRGTVDEFMREIGMYSLWMPG 474
Query: 509 MKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQN 542
M + V HV+++Q+ Y+ KK T +Q
Sbjct: 475 MDLAVTHVQREQVPSYVFEQGYKKPCPTMHANQQ 508
>gi|342321329|gb|EGU13263.1| Endochitinase [Rhodotorula glutinis ATCC 204091]
Length = 703
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/552 (40%), Positives = 324/552 (58%), Gaps = 39/552 (7%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++++PP DL+ ++ L + LK + E+ EE +R VL +LN LVKE++ S
Sbjct: 7 GVTPPISVAPPTARDLEVSKTLIQELKDRGIYESAEEGRNREMVLGRLNKLVKEFVYRSS 66
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
I + A + GGKI+TFGSYRLGVH G+DID L V PRHV+R ++FS F + LK
Sbjct: 67 INHGLSDAKAREAGGKIFTFGSYRLGVHGPGSDIDTLLVVPRHVEREEFFSLFEQMLKET 126
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+ V ++ V EAFVP+IK F GI+ID+LFARLA+ +PDD+DL+DD LL+N+D +C+RS
Sbjct: 127 EGVLEVTGVPEAFVPIIKCTFSGIDIDLLFARLAVPTVPDDLDLKDDNLLRNIDDRCLRS 186
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNG RVTDE+LRLVP++ FR ALRTIKLWA++ IY NV+G+ GGV+WAMLVARICQLY
Sbjct: 187 LNGSRVTDEMLRLVPDVPVFREALRTIKLWAQQRAIYGNVMGFCGGVAWAMLVARICQLY 246
Query: 270 PNAAASTLVC--------------------KFFLVFSQWKWPQPVLLKKPDNVNLGFPVW 309
P +++ +FF++ QW+WP PVLLK + L VW
Sbjct: 247 PKGCVGSIISRCVMCFQLRHVRSSPTGSLRRFFIIMHQWQWPAPVLLKPIEEGPLQVRVW 306
Query: 310 DPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDK 369
+P++ +DR H MPIITPAYP ST NV++ST+ IM EFK+ I + ++ G W +
Sbjct: 307 NPKLYPSDRSHRMPIITPAYPSMCSTHNVTLSTQQIMTAEFKRAADIVDKVFVGSAKWSE 366
Query: 370 LFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPEC 429
LF+ +FF+KYR+YL + ASS SA+ QL+W G +ES++R L+ LE + LAH +
Sbjct: 367 LFQPHDFFSKYRYYLQITASSGSADVQLKWSGTVESRIRQLVMKLEYVDTLLLAHPFVKS 426
Query: 430 YTDTTGVI------ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANV--- 480
+ I A G + + E + + ++IGL
Sbjct: 427 FDRVNYCINEEEQRAVSIGEVPAAVDKRTEQDLIAGQGGTVYTTTFYIGLQIERKPAGDK 486
Query: 481 ---ILNLTYDIQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKT 536
L+++Y FT V W + D M + VR++K L Y+ H ++ +
Sbjct: 487 GPRKLDISYPTNEFTKLVKMWDSYDP----DSMGVIVRYIKSTALPAYV--HAGREPEPP 540
Query: 537 KSGDQNTSAKKR 548
K+G + K+
Sbjct: 541 KTGGVKRAKTKK 552
>gi|242096166|ref|XP_002438573.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
gi|241916796|gb|EER89940.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
Length = 468
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/419 (47%), Positives = 273/419 (65%), Gaps = 2/419 (0%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
S P YG+T L+L P + DLQRT EL + L + E+ +E + R EVL KL+ +VK
Sbjct: 5 SDPPKQYGITKPLSLLGPVEADLQRTAELEKFLVEAGLYESPDESARREEVLGKLDQIVK 64
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSS 141
+W+K+++ + + E+ ++TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 65 DWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIV 124
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
L ++VT+L+ V +A VPV+K F GI ID+L+A ++L +P D+D+ +L +
Sbjct: 125 LHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYD 184
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D+ VRSLNGCRV D+I+RLVPNIENFR LR +K WAK+ G+YSNV G+LGGV+WA+L
Sbjct: 185 VDEATVRSLNGCRVADQIIRLVPNIENFRTTLRCLKYWAKRRGVYSNVTGFLGGVNWALL 244
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR+CQLYPNA S LV +FF VF+QW+WP PV+L + +GFPVWDPR N DR H
Sbjct: 245 VARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEDEVGFPVWDPRKNPRDRCHH 304
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF Y+
Sbjct: 305 MPIITPAYPCMNSSYNVSTSTLRVMVEQFQFGNKICQEIEMNKASWSALFEPFQFFEAYK 364
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIAN 439
+YL + + ED W G +ES++R L +ER+ + L H P Y D + A+
Sbjct: 365 NYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAH 423
>gi|356522230|ref|XP_003529750.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 766
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/544 (38%), Positives = 316/544 (58%), Gaps = 30/544 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++++ P+ DLQRTREL + L + E+ +E + R EVL +L +VK W+K++
Sbjct: 14 FGVTKPISMAGPSATDLQRTRELEKFLAASGLYESKDEAAKREEVLHRLGEIVKSWVKQL 73
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLK 147
+ + + E I TFGSYRLGVH GAD+D LC+ P +V R D+F + + L
Sbjct: 74 TRLRGYTGQMVEDANAIILTFGSYRLGVHGPGADLDTLCIGPSYVTREEDFFYTLHDILA 133
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
V+EVT+L+ + +A VPV+K FDGI ID+L+A ++ +P+D+D+ D +L N+D+ V
Sbjct: 134 NVEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLVLPEDLDISDVSVLHNVDEPTV 193
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRV D+IL+LVPNIE+FR LR +K WAK+ GIYSNV G+LGGV+ A+LVAR+CQ
Sbjct: 194 RSLNGCRVADQILKLVPNIEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQ 253
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
YPNA S LV +FF V++QW+WP PV+L + LGFPVW P N DR H MPIITP
Sbjct: 254 FYPNAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKNPRDRSHHMPIITP 313
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP NS++NVS ST +M ++F+ G I +I + W LFE +FF Y++YL +
Sbjct: 314 AYPCMNSSYNVSTSTLRVMMDQFQYGNKICGEIELSRACWKALFEQYSFFESYKNYLQVD 373
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEI 446
+ A+D W G +ES++R L +ER+ L H + DT+ + A+ +
Sbjct: 374 VVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRLCAHCA----- 428
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVIL-NLTYDIQHFTNAVHWQATQSKMM 505
+F+GL V+ +DI+
Sbjct: 429 ----------------------FFMGLQRKQGEVVQEGQQFDIRGTVEEFRHSVNMYMFW 466
Query: 506 KDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRL 565
K GM+I V HV+++Q+ Y+ K+ + ++ Q + K ++ + E ++ R R
Sbjct: 467 KPGMEIYVSHVRRRQIPFYVVPDGYKRSRLSRPTSQVENCKSFHNEVSGTEHVERIRKRK 526
Query: 566 DSDS 569
++D
Sbjct: 527 NNDG 530
>gi|255713432|ref|XP_002552998.1| KLTH0D06380p [Lachancea thermotolerans]
gi|238934378|emb|CAR22560.1| KLTH0D06380p [Lachancea thermotolerans CBS 6340]
Length = 594
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/398 (47%), Positives = 275/398 (69%), Gaps = 1/398 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++ + P + Q L + LK E++E+ R+EVL L NL +E++ +
Sbjct: 6 TYGVTGPISTAGPTAAENQLNDALIQELKKEKSFESEEDTKKRVEVLRILQNLAQEFVYQ 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS +N+ +A+ GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F + L+
Sbjct: 66 VSKKRNMSDGMAKDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDQILR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
T E+ ++ V +AFVP+IK+ F GI ID++ ARL + ++P ++ L D LL+NLD+K +
Sbjct: 126 TRSELEEIAPVPDAFVPIIKIKFSGISIDLICARLDIAQVPVNLTLADKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL+LVP +F++ALR IKLWA++ +Y+N+ G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILQLVPKPTSFKIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF + ++W WPQPVLLK ++ L VW+PR+ DR H MP+ITP
Sbjct: 246 LYPNACSAVILTRFFHILTKWNWPQPVLLKPIEDGPLQVRVWNPRIYAQDRSHKMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N+S ST+ ++ E ++G IS +I++ K W LF+ +FF KY+ YL ++
Sbjct: 306 AYPSMCATHNISESTKKVILAELERGAQISSEIFSNKKTWSDLFQKHDFFYKYKFYLTVM 365
Query: 388 AS-SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
AS S S+E L+W GL+ESK+R L+ LE INLAH
Sbjct: 366 ASTSGSSEQHLKWSGLVESKLRLLVQKLETLGGINLAH 403
>gi|353242336|emb|CCA73989.1| probable PAP1-poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 624
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/548 (42%), Positives = 317/548 (57%), Gaps = 33/548 (6%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ P+ ++ +L LK E+ EE +R VL ++ LVKE+I +
Sbjct: 10 YGVTPPISRDGPSPQEITLAADLMTELK--GTFESAEEGRTREAVLGRVTKLVKEFIYQA 67
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
I +N+ A+ GGKIYTFGSYRLGVH G+DID L VAP+HVDR D+ F + L+
Sbjct: 68 CIRRNLSEAAAKAAGGKIYTFGSYRLGVHGPGSDIDTLVVAPKHVDRQDFMEIFLDLLQK 127
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
D V + V +A+VPVI GI +D FARLAL IPDD++L DD LLKNLD KCVR
Sbjct: 128 DDWVEEANPVPDAYVPVIDAKIKGISMDFTFARLALSVIPDDLELGDDSLLKNLDDKCVR 187
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG R TD ILRLVPN+ FR ALR IK WA++ IYSNV G+LGG++WA+LVAR+CQL
Sbjct: 188 SLNGSRSTDAILRLVPNVHVFRDALRAIKYWAQRRAIYSNVSGFLGGIAWALLVARVCQL 247
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPN A+T+V +FFL+ S WKWPQPV+LKK + NL VW+P++ +DR H MPIITPA
Sbjct: 248 YPNGNAATIVRRFFLIMSMWKWPQPVVLKKIEEGNLNMRVWNPKIYPSDRAHKMPIITPA 307
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP ST NV T I+QEE K+G+ + I NG+ W LF FF++Y++YL +IA
Sbjct: 308 YPSMCSTHNVMNCTFEIIQEELKRGQELIVRITNGEAKWADLFTKHTFFSQYQYYLQIIA 367
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH-----VNPECYTDTT---GVIANG 440
S E Q +W +ESK R L+G LE + + H N YT T I G
Sbjct: 368 SCDDEEIQKKWSKTVESKGRQLVGKLEESGTLARVHPFVKGFNKTYYTVTMQEHADIVLG 427
Query: 441 SGSPEITAEGKEEGGENTSPPVSGV-ASMWFIGLDFIAANVILNLT----YDI-----QH 490
+ P + +EE + S + + ++IG++ + T DI +
Sbjct: 428 NVPPAVANRTEEEAKQIESNERQVIHTTTFYIGMEITRPPPSVTTTGPRKLDISIPTSEF 487
Query: 491 FTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYL------PAHMLKKDKKTK---SGDQ 541
A W+ Q+ D M I VRH+K L + + P LK+ K+K G+
Sbjct: 488 MKTARSWELYQN----DIMGIAVRHIKNSALPDEVFEGAPRPRKGLKRVAKSKVPIDGEG 543
Query: 542 NTSAKKRK 549
+ K+R+
Sbjct: 544 AQATKRRR 551
>gi|449448062|ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 772
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/604 (38%), Positives = 338/604 (55%), Gaps = 62/604 (10%)
Query: 21 PQSQA-PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
P +QA P YG+T ++++ P D+QR +EL + L + E+ EE + R EVLS++
Sbjct: 17 PANQAVPKCYGVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRIGQ 76
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DY 138
+VK+W+K+++ K + E I+TFGSYRLGVH GADID LCV P +V+R D+
Sbjct: 77 IVKDWVKQLTRIKGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDF 136
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F L+ ++EV++L+ V +A VPV+K FDGI ID+L+A ++ +P+D+D+ D +
Sbjct: 137 FYMLHNILEEMEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVSV 196
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVP----------NIENFRL----ALRTIKLWAKKHG 244
L N+D+ VRSLNGCRV D+IL+LVP NI ++L ALR +K WAK+ G
Sbjct: 197 LYNVDEPTVRSLNGCRVADQILKLVPFFFFVKFFHPNIPVWKLXSPFALRCLKFWAKRRG 256
Query: 245 IYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNL 304
+YSNV G+LGGV+WA+LVAR+CQLYPNA S L+ +FF V++ W+WP PV+L + +L
Sbjct: 257 VYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDL 316
Query: 305 GFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGK 364
G VWDPR N DR H MPIITPAYP NS++NVS ST +M E+F+ G + E+I K
Sbjct: 317 GCSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNK 376
Query: 365 TMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-A 423
W LFE FF Y++YL + + A+D W G +ES+ RHL +ER L
Sbjct: 377 AQWSSLFEPYLFFESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQC 436
Query: 424 HVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVIL- 482
H P Y DT S P + A +F+GL +I
Sbjct: 437 HPYPHEYVDT-------------------------SKPCAHCA--FFMGLQRKQGEIIQE 469
Query: 483 NLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTK----- 537
+DI+ + + K GM+I V HV+++Q+ ++ K+ + ++
Sbjct: 470 GQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHKRFRASRLSALQ 529
Query: 538 ---------SGDQNTSAK--KRKSDQALDELGDKSRPRLDSDSNSLSDKV-NNISNNGDQ 585
+G + + KRK+D A E S + S S D V +NISN +
Sbjct: 530 RSPNQEDVQNGRSGSCERDLKRKNDPARIEGEHNSPQKRQSISPRRQDSVSSNISNFSNT 589
Query: 586 SSSE 589
+SSE
Sbjct: 590 ASSE 593
>gi|328772740|gb|EGF82778.1| hypothetical protein BATDEDRAFT_9489 [Batrachochytrium
dendrobatidis JAM81]
Length = 556
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/395 (49%), Positives = 279/395 (70%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ +PP + ++ T +L + L+ Y E++EE R VL K++ + KE+++ VS
Sbjct: 26 GVTPPISENPPTEKEIACTEQLVQTLRDYGQYESEEEAQKREIVLGKIDAIFKEFVRSVS 85
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
I +P ++A VGGKI+TFGSYRLGVH K +DID LCVAP+HV R D+ +E LK
Sbjct: 86 IKNGLPESLANDVGGKIFTFGSYRLGVHGKKSDIDTLCVAPKHVKREDFLEYMYELLKAR 145
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
EV+++ AV +A+VP+IK+ F I ID++FARLAL + +D+DL DD LLKNLD +C+RS
Sbjct: 146 QEVSEITAVADAYVPIIKLEFSDISIDLVFARLALPTVSEDLDLSDDSLLKNLDDRCIRS 205
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNG RVTD+ILRLVPN+E FR+ALR IKLWA + IYSNV+G+ GGV+WA+L+AR+CQLY
Sbjct: 206 LNGSRVTDDILRLVPNVETFRIALRCIKLWALQRAIYSNVMGFFGGVAWAILIARVCQLY 265
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
P AAA +V KFF + +W+WP PVLLK + L VW+P++ D+ H MPIITPAY
Sbjct: 266 PCAAAGEVVSKFFQIMYRWEWPLPVLLKPIEEGPLAVRVWNPKIYPQDKAHRMPIITPAY 325
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P ST NV++ST+T+ +EF++ ++ I G+ W LF+ +FF +Y++YL +IAS
Sbjct: 326 PSMCSTHNVTVSTQTVTTQEFERAAVTTDKIMLGREKWTVLFQKNDFFHRYKYYLQVIAS 385
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
S E QL W G +ES++R L+ LE ++++AH
Sbjct: 386 SNDDEKQLMWAGFVESRLRQLVMKLELAENLDIAH 420
>gi|302684083|ref|XP_003031722.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
gi|300105415|gb|EFI96819.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
Length = 558
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/544 (40%), Positives = 320/544 (58%), Gaps = 39/544 (7%)
Query: 28 TY-GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIK 86
TY G+T ++ + + D + T L + L+ + E+D+E +R VL +++ LVK+++
Sbjct: 4 TYLGVTPPISTAESSAEDQKLTESLMQELRAQSTFESDQESRTREIVLGRISALVKKFVT 63
Query: 87 EVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
V+ A + A GGKI+TFGSYRLGVH G+DID LCV P+HV+R ++FS F L
Sbjct: 64 TVAKAHGLSDATANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVNRDEFFSVFEPML 123
Query: 147 KTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDDMDLRDDMLLKNLDQK 205
+ +T++ V +AFVP+IK+ GI +D+L AR+ L IPDD+ L+++ LL+NLD++
Sbjct: 124 REEPNITEVSGVPDAFVPIIKIKMMGIPLDLLMARMVQLSSIPDDLSLQNNELLRNLDER 183
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
C++SL G R+ DEIL L+PN + FR ALR IKLWA++ IYSN+ G+LGGV+WAMLVARI
Sbjct: 184 CIKSLGGSRLVDEILSLIPNHQVFRDALRCIKLWAQRRAIYSNINGFLGGVAWAMLVARI 243
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYPNA A T+V +FF + +W+WPQPVLLK+ + L +W+P+V +DR H MPII
Sbjct: 244 CQLYPNAVAGTIVRRFFGIMWRWQWPQPVLLKQIEEGPLEVRIWNPQVYPSDRAHRMPII 303
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TP+YP NST NVS ST+T+M EFK+G I I G+ W LF FFT +RHYL
Sbjct: 304 TPSYPSMNSTHNVSYSTQTVMIHEFKRGLDIVGQIQKGEASWADLFNKHTFFTDFRHYLQ 363
Query: 386 LIASSVSAEDQLEWC---------GLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV 436
++AS+ +W G I R I ER H C +D
Sbjct: 364 IVASADDQHSHDKWQLVLRLDAQEGSIIQVTRPFIKGFERIYH---------CISDDERR 414
Query: 437 IAN-GSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI-----AANVILNLTYDIQH 490
A G S AEG+ G + T+ + +F+GL+F + LN+++
Sbjct: 415 AATEGRFSDLKAAEGRPAGDKTTTV----YTTAFFLGLEFKPKDGNSGTRQLNISFPTGE 470
Query: 491 FTNAV-HWQATQSKMMKDGMKIEVRHVKKKQLSEYL---PAHMLKKDKKTKSGDQ-NTSA 545
F N V W+ + M++ VRH+K+ +L E++ PA +K K G + S
Sbjct: 471 FCNLVKKWETYD----ETKMRVNVRHIKRSELPEFVYESPAERPRKRKSVAGGHSPDKSE 526
Query: 546 KKRK 549
KKR+
Sbjct: 527 KKRR 530
>gi|49388677|dbj|BAD25861.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
gi|125581374|gb|EAZ22305.1| hypothetical protein OsJ_05959 [Oryza sativa Japonica Group]
Length = 610
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/522 (41%), Positives = 302/522 (57%), Gaps = 33/522 (6%)
Query: 19 GKPQSQAPVTYGMTTA---LNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLS 75
GKP+S + G A L+L+ P DL +T EL + L + E +EE + R EVL
Sbjct: 10 GKPRSSPKRSGGGGGADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLR 69
Query: 76 KLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR 135
+++ +VKEW+K+V+I K + ++ ++TFGSYRLGVH GADIDALC+ P +V R
Sbjct: 70 EIDQIVKEWVKKVTIQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKR 129
Query: 136 AD-YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLR 194
+ +F + L ++EVT+L+ V +A VPV+K F G+ ID+L+A ++L IP D D+
Sbjct: 130 EEEFFVMLYGALSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDIS 189
Query: 195 DDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLG 254
+L ++D+ VRSLNGCRV D+ILRLVPN E FR LR +K WA++ G+YSNV G LG
Sbjct: 190 QGSVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLG 249
Query: 255 GVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN-VNLGFPVWDPRV 313
GVSWA+LVAR+CQLYPNA S LV +FF VF+QW+WP PV+L +N NLGF VWDPR
Sbjct: 250 GVSWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRK 309
Query: 314 NVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFET 373
N DR H+MPIITPAYP NS++NVS ST ++ E+F+ G I ++I K W LFE
Sbjct: 310 NPRDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEP 369
Query: 374 PNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTD 432
FF Y YLV+ + +D W G IES++R L +ER+ L H NP Y D
Sbjct: 370 FQFFEAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYAD 429
Query: 433 TTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFT 492
P + +++GL I +DI+
Sbjct: 430 ---------------------------PSIQCAHCAFYMGLSRKEGMKIRGQKFDIRGTV 462
Query: 493 NAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
+ + K GM + V HV+KK++ Y+ +K +
Sbjct: 463 DEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTR 504
>gi|357521515|ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago truncatula]
Length = 822
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/579 (37%), Positives = 324/579 (55%), Gaps = 66/579 (11%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++LS P + D+ +TREL + L+ + E +E R EVL +L+ +VK W+K +
Sbjct: 18 GITEPISLSGPTEYDVAKTRELEKYLQDAGLYENQDEAICREEVLGRLDQIVKIWVKTIC 77
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKT 148
AK + ++ I+TFGSYRLGVH GADID LCV PRH R D+F + L
Sbjct: 78 RAKGFNEQLVKEANAMIFTFGSYRLGVHGPGADIDVLCVGPRHATRKEDFFGELHKMLSE 137
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EVT+L V +A VPV+ F+G+ +D+L+A+L+L IP+D+DL + +L+ D++ VR
Sbjct: 138 MPEVTELHPVPDAHVPVMGFKFNGVSLDLLYAQLSLWVIPEDLDLSQEAILQYTDEQTVR 197
Query: 209 SLNGCRVTDEILRLVPNIE-----------------------------NFRLALRTIKLW 239
SLNGCRVTD+IL LVPNI+ NFR LR +KLW
Sbjct: 198 SLNGCRVTDQILHLVPNIQVDKYRTFTFSFDMTSGFHVIDYISISQVQNFRTTLRCVKLW 257
Query: 240 AKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKP 299
AK G+YSNV G+LGG++WA+LV RICQLYPNA + LV +FF V++QW+WP PV+L
Sbjct: 258 AKCRGVYSNVAGFLGGINWALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCTI 317
Query: 300 DNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISED 359
+LG VWDPR N D+YHLMPIITPAYP NS++NVS+ST +M EEF++G I E
Sbjct: 318 KEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSLSTLRVMTEEFQRGDEICEA 377
Query: 360 IYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH 419
+ K WD LFE FF Y++YL + S+ + +D W G ++S++R L +ERN +
Sbjct: 378 MEANKADWDTLFEPYPFFESYKNYLRIDISAENVDDLRNWKGWVKSRLRQLTLKIERNTY 437
Query: 420 INL-AHVNPECYTDTTGVI--ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI 476
L H +P ++D + + + G EGG+
Sbjct: 438 GMLQCHPHPGDFSDKSRPLHCSYFMGLQRKQGVPANEGGQ-------------------- 477
Query: 477 AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKT 536
++ ++ F ++V+ TQ K GM I + HVK++ +PA + +
Sbjct: 478 -----FDMRLTVEEFKHSVN-AYTQ---WKPGMNISISHVKRRN----IPAFVFPGGVRP 524
Query: 537 KSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLSDK 575
K + T KR+S+ + G + ++ + + +D+
Sbjct: 525 KCPSKVTWVSKRRSELRVSGHGQAEKSQVGKELGANNDR 563
>gi|125538688|gb|EAY85083.1| hypothetical protein OsI_06439 [Oryza sativa Indica Group]
Length = 683
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/522 (41%), Positives = 303/522 (58%), Gaps = 34/522 (6%)
Query: 19 GKPQSQAPVTYGMTTA---LNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLS 75
GKP+S +P G A L+L+ P DL +T EL + L + E +EE + R EVL
Sbjct: 10 GKPRS-SPKRSGGGGADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLR 68
Query: 76 KLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR 135
+++ +VKEW+K+V+I K + ++ ++TFGSYRLGVH GADIDALC+ P +V R
Sbjct: 69 EIDQIVKEWVKKVTIQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKR 128
Query: 136 AD-YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLR 194
+ +F + + L ++EVT+L+ V +A VPV+K F G+ ID+L+A ++L IP D D+
Sbjct: 129 EEEFFVTLYGALSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDIS 188
Query: 195 DDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLG 254
+L ++D+ VRSLNGCRV D+ILRLVPN E FR LR +K WA++ G+YSNV G LG
Sbjct: 189 QGSVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLG 248
Query: 255 GVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN-VNLGFPVWDPRV 313
GVSWA+LVAR+CQLYPNA S LV +FF VF+QW+WP PV+L +N NLGF VWDPR
Sbjct: 249 GVSWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRK 308
Query: 314 NVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFET 373
N DR H+MPIITPAYP NS++NVS ST ++ E+F+ G I ++I K W LFE
Sbjct: 309 NPRDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEP 368
Query: 374 PNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTD 432
FF Y YLV+ + +D W G IES++R L +ER+ L H NP Y D
Sbjct: 369 FQFFEAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYAD 428
Query: 433 TTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFT 492
P + +++GL I +DI+
Sbjct: 429 ---------------------------PSIQCAHCAFYMGLSRKEGMKIRGQKFDIRGTV 461
Query: 493 NAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
+ + K GM + V HV KK++ Y+ +K +
Sbjct: 462 DEFMHEIGMYTQWKSGMDLAVTHVCKKEIPLYVFEQGCQKTR 503
>gi|356528904|ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 790
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/545 (38%), Positives = 318/545 (58%), Gaps = 31/545 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++++ P DLQRTREL + L + E+ EE + R EVL +L +VK W+K++
Sbjct: 14 FGVTKPISMAGPTVTDLQRTRELEKFLAVSGLYESKEEAAKREEVLHRLGEIVKNWVKQL 73
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLK 147
+ + + E I TFGSYRLGVH GAD+D LC+ P +V+R D+F + + L
Sbjct: 74 TRLRGYTDQMVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTLHDILA 133
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
++EVT+L+ + +A VPV+K FDGI ID+L+A ++ +P+D+D+ D +L N+D+ V
Sbjct: 134 NIEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLIVPEDLDISDVSVLHNVDEPTV 193
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRV D+IL+LVPN+E+FR LR +K WAK+ GIYSNV G+LGGV+ A+LVAR+CQ
Sbjct: 194 RSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQ 253
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
YP A S LV +FF V++QW+WP PV+L + +LGFPVW P N DR H MPIITP
Sbjct: 254 FYPKAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENDLGFPVWHPGKNPRDRSHHMPIITP 313
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP NS++NVS+ST +M E+F+ G I +I K W LFE +FF Y++YL +
Sbjct: 314 AYPCMNSSYNVSMSTLRVMMEQFQYGNKICGEIELSKDCWKALFEKYSFFESYKNYLQVD 373
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEI 446
+ A+D W G +ES++R L +ER+ L H + DT+ A+ +
Sbjct: 374 VVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRQCAHCA----- 428
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVIL-NLTYDIQHFTNAVHWQATQSKMM 505
+F+GL V+ +DI+
Sbjct: 429 ----------------------FFMGLHRKEGEVVQEGQQFDIRGTVEEFRHSVNMYMFW 466
Query: 506 KDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQ-ALDELGDKSRPR 564
K GM+I V HV+++Q+ Y+ K+ + ++ Q + K +++ ++ E ++ R R
Sbjct: 467 KPGMEIYVSHVRRRQIPCYVFPDGYKRSRPSRPTSQFENCKSFHNNEVSVTEHVERIRKR 526
Query: 565 LDSDS 569
++D
Sbjct: 527 KNNDG 531
>gi|326505742|dbj|BAJ95542.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 694
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/506 (40%), Positives = 299/506 (59%), Gaps = 30/506 (5%)
Query: 35 LNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNI 94
++L+ P D+QRT EL + L + E+ +E + R EVL +L+ +VK W+K+++ +
Sbjct: 8 ISLAGPLDADVQRTAELNKFLVEAGLYESADESARREEVLGELDKIVKVWVKQLTSQRGY 67
Query: 95 PPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKTVDEVT 153
+ E+ ++TFGSYRLGVH GADID LCV P +V+R D+F + L +EV+
Sbjct: 68 TDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEVS 127
Query: 154 DLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGC 213
L+ V +A VPV+K F GI ID+L+A ++L +P D+D+ + +L ++D+ VRSL GC
Sbjct: 128 QLQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQEAVLYDIDEATVRSLTGC 187
Query: 214 RVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA 273
RV D+ILRLVPNIE+FR LR +K WA++ G+YSNV G+LGGV+WA+LVAR+CQLYPNA
Sbjct: 188 RVADQILRLVPNIESFRTTLRCLKHWARRRGVYSNVTGFLGGVNWALLVARVCQLYPNAV 247
Query: 274 ASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQN 333
S LV +FF VF+QW+WP PV+L + LGFPVWDPR N DR H MPIITPAYP N
Sbjct: 248 PSMLVSRFFRVFTQWRWPTPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPCMN 307
Query: 334 STFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSA 393
S++NVS ST +M E+F+ G I ++I K W LFE NFF Y++YL + +
Sbjct: 308 SSYNVSTSTLRVMIEQFQFGNKICQEIEMNKASWSALFEPFNFFEAYKNYLQVDIIAEDD 367
Query: 394 EDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEITAEGKE 452
ED W G +ES++R L +ER+ + L H P Y D + A+ +
Sbjct: 368 EDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCA----------- 416
Query: 453 EGGENTSPPVSGVASMWFIGLDFI-AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKI 511
+F+GL + +DI+ + + K GM++
Sbjct: 417 ----------------FFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMEL 460
Query: 512 EVRHVKKKQLSEYLPAHMLKKDKKTK 537
V HV++K++ Y+ K+ + +
Sbjct: 461 AVSHVRRKEIPAYVFPEGYKRPRPQR 486
>gi|297598868|ref|NP_001046352.2| Os02g0227400 [Oryza sativa Japonica Group]
gi|255670737|dbj|BAF08266.2| Os02g0227400, partial [Oryza sativa Japonica Group]
Length = 602
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/518 (41%), Positives = 299/518 (57%), Gaps = 30/518 (5%)
Query: 20 KPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
+ Q +A V L+L+ P DL +T EL + L + E +EE + R EVL +++
Sbjct: 6 RGQGEASVVPEADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQ 65
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD-Y 138
+VKEW+K+V+I K + ++ ++TFGSYRLGVH GADIDALC+ P +V R + +
Sbjct: 66 IVKEWVKKVTIQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEF 125
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F + L ++EVT+L+ V +A VPV+K F G+ ID+L+A ++L IP D D+ +
Sbjct: 126 FVMLYGALSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSV 185
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L ++D+ VRSLNGCRV D+ILRLVPN E FR LR +K WA++ G+YSNV G LGGVSW
Sbjct: 186 LCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSW 245
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN-VNLGFPVWDPRVNVAD 317
A+LVAR+CQLYPNA S LV +FF VF+QW+WP PV+L +N NLGF VWDPR N D
Sbjct: 246 ALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRD 305
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
R H+MPIITPAYP NS++NVS ST ++ E+F+ G I ++I K W LFE FF
Sbjct: 306 RSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFF 365
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGV 436
Y YLV+ + +D W G IES++R L +ER+ L H NP Y D
Sbjct: 366 EAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYAD---- 421
Query: 437 IANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVH 496
P + +++GL I +DI+ +
Sbjct: 422 -----------------------PSIQCAHCAFYMGLSRKEGMKIRGQKFDIRGTVDEFM 458
Query: 497 WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
+ K GM + V HV+KK++ Y+ +K +
Sbjct: 459 HEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTR 496
>gi|19112154|ref|NP_595362.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe 972h-]
gi|26397523|sp|Q10295.1|PAP_SCHPO RecName: Full=Poly(A) polymerase pla1; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|1419256|emb|CAA56141.1| polymerase [Schizosaccharomyces pombe]
gi|4160340|emb|CAA22808.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe]
Length = 566
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/396 (46%), Positives = 272/396 (68%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ +P + + L LK N+ E+ E R++VL +L + E++K+V
Sbjct: 6 WGITPPISTAPATEQENALNTALINELKNQNLFESPAESEKRVKVLDELQQITTEFVKKV 65
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S+AK++ +A + GGKI+T+GSYRLGV+ G+DID L V P+HV R ++F L+
Sbjct: 66 SLAKHMNEKMANEAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSRDNFFQDLEPMLRE 125
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EVTDL AV +A+VP+IK F GI ID++FARL++ +P D++L D+ LLK ++++CV
Sbjct: 126 REEVTDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEERCVL 185
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RVTD+IL+LVPN F+ ALR IK WA++ IY+NV+G+ GGV+WAM+VARICQL
Sbjct: 186 SLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARICQL 245
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA +S +V KFF + QW WPQP+LLK ++ L +W+P++ +D+ H MPIITPA
Sbjct: 246 YPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPA 305
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N+++ST+TI+ E + I++ I W LF+ +FF +Y+HYL + A
Sbjct: 306 YPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHYLTITA 365
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
++ +AE QL+W GL+ESK+RHL+ LE I LAH
Sbjct: 366 AAKTAEAQLKWAGLVESKLRHLVTRLELVDAIALAH 401
>gi|448531596|ref|XP_003870285.1| Pap1 poly(A) polymerase [Candida orthopsilosis Co 90-125]
gi|380354639|emb|CCG24155.1| Pap1 poly(A) polymerase [Candida orthopsilosis]
Length = 557
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/433 (45%), Positives = 289/433 (66%), Gaps = 1/433 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++L+ P D + L + LK E++ R+EVL+ L L ++++ E
Sbjct: 10 TYGVTPPISLTDPTSKDKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDFVYE 69
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS+ KN+ +A+ GGKI+TFGSYRLGV+ +DIDAL V PRHV R D+F+ F + L+
Sbjct: 70 VSLRKNMTQGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTREDFFTVFEKILR 129
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ +V+EAFVP+IK+ F GI ID+LFA+L + +P D+ L D LLKN+D+K +
Sbjct: 130 GRPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDM 189
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEILRLVP F+ ALR IK+WA++ +Y+NV G+ GGV+WAMLVARICQ
Sbjct: 190 RALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQ 249
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ KFF ++SQW WPQPVLLK+ ++ L VW+PR+ DR H MP+ITP
Sbjct: 250 LYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITP 309
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ I+ EF +G I +I+ G+ +W L E +FF +Y+ YL ++
Sbjct: 310 AYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCVV 369
Query: 388 ASSVS-AEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEI 446
A++ S AE+ L++ G++ESK+R L+ LE+ + LAH + + + ++ S +
Sbjct: 370 AATKSNAEEHLKYSGMVESKLRLLVQKLEQVDGVELAHPYVKSFENAYYCKSDEEMSSIV 429
Query: 447 TAEGKEEGGENTS 459
A G +G E S
Sbjct: 430 NAYGTLQGDEIAS 442
>gi|324975506|gb|ADY62687.1| PAPa [Candida orthopsilosis]
Length = 552
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/433 (45%), Positives = 289/433 (66%), Gaps = 1/433 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++L+ P D + L + LK E++ R+EVL+ L L ++++ E
Sbjct: 5 TYGVTPPISLTDPTSKDKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDFVYE 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS+ KN+ +A+ GGKI+TFGSYRLGV+ +DIDAL V PRHV R D+F+ F + L+
Sbjct: 65 VSLRKNMTQGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTREDFFTVFEKILR 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ +V+EAFVP+IK+ F GI ID+LFA+L + +P D+ L D LLKN+D+K +
Sbjct: 125 GRPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDM 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEILRLVP F+ ALR IK+WA++ +Y+NV G+ GGV+WAMLVARICQ
Sbjct: 185 RALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ KFF ++SQW WPQPVLLK+ ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ I+ EF +G I +I+ G+ +W L E +FF +Y+ YL ++
Sbjct: 305 AYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCVV 364
Query: 388 ASSVS-AEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEI 446
A++ S AE+ L++ G++ESK+R L+ LE+ + LAH + + + ++ S +
Sbjct: 365 AATKSNAEEHLKYSGMVESKLRLLVQKLEQVDGVELAHPYVKSFENAYYCKSDEEMSSIV 424
Query: 447 TAEGKEEGGENTS 459
A G +G E S
Sbjct: 425 NAYGTLQGDEIAS 437
>gi|321249627|ref|XP_003191515.1| polynucleotide adenylyltransferase [Cryptococcus gattii WM276]
gi|317457982|gb|ADV19728.1| Polynucleotide adenylyltransferase, putative [Cryptococcus gattii
WM276]
Length = 644
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/544 (41%), Positives = 321/544 (59%), Gaps = 31/544 (5%)
Query: 23 SQAPVTY-GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
S PV + G+T + PP D++ + L L N E+D+E R +LS + LV
Sbjct: 3 SNPPVKFLGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLV 62
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
+++ +VSI + +A + GG+IYT GSYRLGVH G+DID +CV PRH+ R +F
Sbjct: 63 AKFVHDVSIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREHFFGE 122
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F + L+ VT++ AVE AFVPV+K G+E+D+LFAR+ L E D +D+ D +L+
Sbjct: 123 FQDMLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDLLDIEKDEILRG 182
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D RSLNG RVTD IL LVP++ FR ALRTI+LWAK+ GIYSNVLG+ GGV+WA+L
Sbjct: 183 VDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALL 242
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN--VNLGFPVWDPRVNVADRY 319
ARICQLYP AA +T+V KFF ++ QW WPQPVLLKK DN N+ VW+P+++ D+
Sbjct: 243 TARICQLYPAAAPATIVGKFFPIYYQWNWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQA 302
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGK-TMWDKLFETPNFFT 378
H MP+ITPAYP ST N++ ST +I+++E + I+++I + W LFE +FF+
Sbjct: 303 HRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPGSSWIPLFEKVDFFS 362
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH-----VNPECYTDT 433
Y+ Y+ ++AS+ +++ +W G++ES++R L+G+LE I AH VN Y T
Sbjct: 363 MYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLENTDCIITAHPQVGGVNRVFYCLT 422
Query: 434 TGVIANGSGSPEITAEGKEEGGENTSPPVSG------VASMWFIGLDF-----IAANVIL 482
A S E+TAE + E+ V G +FIGL+ + +L
Sbjct: 423 EEEQAAASQG-ELTAEMIDRTEED----VEGKEHRKIYTKSFFIGLEIEKKSKESGGRVL 477
Query: 483 NLTYDIQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL-PAHMLKKDKKTKSGD 540
NL Y + F W K + M + +R K+ +L Y+ P M K KKTK
Sbjct: 478 NLFYPSKKFCAVCQNWD----KYNEMEMSVILRPAKRSELPPYVFPDGMPKSKKKTKRQQ 533
Query: 541 QNTS 544
QN S
Sbjct: 534 QNGS 537
>gi|58258863|ref|XP_566844.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222981|gb|AAW41025.1| polynucleotide adenylyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 642
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/548 (41%), Positives = 322/548 (58%), Gaps = 25/548 (4%)
Query: 23 SQAPVTY-GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
S PV + G+T + PP D++ + L L N E+D+E R +LS + LV
Sbjct: 3 SNPPVKFLGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLV 62
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
+++ +VSI + +A + GG+IYT GSYRLGVH G+DID +CV PRH+ R +F
Sbjct: 63 AKFVHDVSIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREHFFGE 122
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F + L+ VT++ AVE AFVPV+K G+E+D+LFAR+ L E D +D+ D +L+
Sbjct: 123 FQDMLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRG 182
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D RSLNG RVTD IL LVP++ FR ALRTI+LWAK+ GIYSNVLG+ GGV+WA+L
Sbjct: 183 VDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALL 242
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN--VNLGFPVWDPRVNVADRY 319
ARICQLYP AA +T+V KFF ++ QW WPQPVLLKK DN N+ VW+P+++ D+
Sbjct: 243 TARICQLYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQA 302
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGK-TMWDKLFETPNFFT 378
H MP+ITPAYP ST N++ ST +I+++E + I+++I + W LFE +FF+
Sbjct: 303 HRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVDFFS 362
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH-----VNPECYTDT 433
Y+ Y+ ++AS+ +++ +W G++ES++R L+G+LE I AH VN Y T
Sbjct: 363 MYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLENTDCIITAHPQVGGVNRVFYCLT 422
Query: 434 TGVIANGSGSPEITAE---GKEEGGENTSPPVSGVASMWFIGLDF-----IAANVILNLT 485
A S E+TAE EE +N S +FIGL+ +LNL
Sbjct: 423 EEEQAAASQG-ELTAEMIDRTEEDVKNREHRKIYTKS-FFIGLEIEKKSKETGGRVLNLF 480
Query: 486 YDIQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL-PAHMLKKDKKTKSGDQNT 543
Y + F W K + M + +R K+ +L Y+ P M K KKTK QN
Sbjct: 481 YPSKKFCAVCQNW----DKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNG 536
Query: 544 SAKKRKSD 551
S +D
Sbjct: 537 SGDAGMND 544
>gi|405117907|gb|AFR92682.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 644
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/547 (40%), Positives = 320/547 (58%), Gaps = 23/547 (4%)
Query: 23 SQAPVTY-GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
S PV + G+T + PP D++ + L L N E+D+E R +LS + LV
Sbjct: 3 SNPPVKFLGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLV 62
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
+++ +VSI + +A + GG+IYT GSYRLGVH G+DID +CV PRH+ R +F
Sbjct: 63 AKFVHDVSIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREHFFGE 122
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F + L+ VT++ AVE AFVPV+K G+E+D+LFAR+ L E D +D+ D +L+
Sbjct: 123 FQDMLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRG 182
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D RSLNG RVTD IL LVP++ FR ALRTI+LWAK+ GIYSNVLG+ GGV+WA+L
Sbjct: 183 VDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALL 242
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN--VNLGFPVWDPRVNVADRY 319
ARICQLYP AA +T++ KFF ++ QW WPQPVLLKK DN N+ VW+P+++ D+
Sbjct: 243 TARICQLYPAAAPATIIGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQA 302
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGK-TMWDKLFETPNFFT 378
H MP+ITPAYP ST N++ ST +I+++E + I+++I + W LFE +FF+
Sbjct: 303 HRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVDFFS 362
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH-----VNPECYTDT 433
Y+ Y+ ++AS+ +++ +W G++ES++R L+G+LE I AH VN Y T
Sbjct: 363 MYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLENTDCIITAHPQVGGVNRLFYCLT 422
Query: 434 TGVIANGSGSPEITAEGKEEGGENTSPPVSG--VASMWFIGLDF-----IAANVILNLTY 486
A S E+TAE + E+ +FIGL+ +LNL Y
Sbjct: 423 EEEQAAASQG-ELTAEMIDRTEEDVKDKEHRKIYTKSFFIGLEIEKKSKETGGRVLNLFY 481
Query: 487 DIQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL-PAHMLKKDKKTKSGDQNTS 544
+ F W K + M + +R K+ +L Y+ P M K KKTK QN S
Sbjct: 482 PSKKFCAVCQNWD----KYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNGS 537
Query: 545 AKKRKSD 551
+D
Sbjct: 538 GDAGMND 544
>gi|400594797|gb|EJP62626.1| Poly(A) polymerase pla1 [Beauveria bassiana ARSEF 2860]
Length = 593
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/563 (40%), Positives = 329/563 (58%), Gaps = 41/563 (7%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNV----SETDEELSSRMEVLSKLNNLVKE 83
YG+T +++S P + + + + L E L+ S+T + LS+R VL L + E
Sbjct: 6 VYGVTPPISVSLPTENEKRISESLIEELRRQKTFESPSDTQKSLSNRHTVLESLQKITDE 65
Query: 84 WIKEVSIAKNIPPTVAEK-VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
++++V+ K + K GK++T+GS+RLGV G+DID L VAP++V R DYF F
Sbjct: 66 FVRKVAREKEPKNDILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTREDYFKYF 125
Query: 143 FEKLKTV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI-PDDMDLRDDML 198
E L + D +TDL AV +AFVP+IK + GI ID++F+R+ K++ PD DL+D L
Sbjct: 126 PELLAEMAPKDSITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGL 185
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L+ LD+ +RSLNG RVTDEIL LVP FRLALR IKLWA++ +Y N++G+ GGV+W
Sbjct: 186 LRGLDEAELRSLNGTRVTDEILALVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAW 245
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR+CQLYP AA S +V KFFLV SQW+WPQPVLLK +N L VW+P+V D
Sbjct: 246 AMLVARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDS 305
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
+HLMPIITPAYP +TFN++ S+ TI++ E ++G I+E + GK W+ LF FFT
Sbjct: 306 FHLMPIITPAYPSMCATFNITRSSMTIIKRELQRGLEITEQVMVGKQSWNDLFVKHTFFT 365
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYT------ 431
Y++Y+ ++++S + + W G IESKVR L+ LE +PHI LAH + Y+
Sbjct: 366 TGYKYYISVVSASKARDAHKLWSGYIESKVRMLVQKLEHHPHIALAHPFVKGYSRRHLCK 425
Query: 432 DTTGVIANGSGS--------PEITAEGKEEGGE-----------NTSPPVSGVASMWFIG 472
D T + GS ++ E E+ GE TS V + +IG
Sbjct: 426 DETQIEQVQEGSLDFVVSDDVQLDGESNEQNGEQKEAAEGEAEKQTSSEV--FTTTHYIG 483
Query: 473 LDFIAANVILNLTYDIQHF-TNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLK 531
L+ L+L+Y + F WQ Q + +K + I V+HV+ L + + K
Sbjct: 484 LELEEGAKSLDLSYQVDEFKVLCTAWQKYQDE-LKPLVSIGVQHVRNFNLPDDVFGADEK 542
Query: 532 KDKKTKSGDQNTSAKKRKSDQAL 554
K +K S N KKR + + +
Sbjct: 543 KPQKKSSKGAN--GKKRGAAEVM 563
>gi|328351170|emb|CCA37570.1| poly(A) polymerase [Komagataella pastoris CBS 7435]
Length = 908
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 230/591 (38%), Positives = 344/591 (58%), Gaps = 44/591 (7%)
Query: 4 TQH--SNSMQTSKP--HQDGKPQSQAPV--TYGMTTALNLSPPNQLDLQRTRELAECLKP 57
+QH S S S P HQ Q+Q + TYG+T A++ + P+ + + L + L+
Sbjct: 331 SQHLLSTSPSNSSPCTHQQTNLQTQTIMNKTYGVTPAISTAGPSSEETRLNDLLVDELRR 390
Query: 58 YNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVH 117
E++ R +VL L L +E++ VS +KN+ +A+ GGKI+TFGSYRLGV+
Sbjct: 391 QGSFESEAATLKRAKVLKTLQQLTQEFVYSVSKSKNMDEGMAKDAGGKIFTFGSYRLGVY 450
Query: 118 HKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDM 177
G+DID L V P+H++R D+F+ F + L+ E+ ++++V +AFVP+IKM FDGI ID+
Sbjct: 451 GPGSDIDTLVVFPKHINREDFFTVFEKILRQRPELEEIQSVPDAFVPIIKMEFDGISIDL 510
Query: 178 LFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIK 237
+ ARL + +P ++ L D LLKN+D+K +R+LNG RVTDEIL LVP F+ ALR IK
Sbjct: 511 ICARLDIPRVPLNLTLDDKNLLKNIDEKDLRALNGTRVTDEILLLVPQPTVFKHALRAIK 570
Query: 238 LWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK 297
+WA++ +Y NV G+ GGV+WAMLVARICQLYPNA ++ ++ KFF++ QW WPQPVLLK
Sbjct: 571 IWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNAVSAVIISKFFVILGQWNWPQPVLLK 630
Query: 298 KPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTIS 357
++ L VW+PR+ D+YH MP+ITPAYP +T N++ ST+ ++ +EF++G I
Sbjct: 631 PIEDGPLQVRVWNPRLYPHDKYHKMPVITPAYPSMCATHNITESTKKVILQEFQRGSGIV 690
Query: 358 EDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSV-SAEDQLEWCGLIESKVRHLIGNLER 416
+I++G W LF +FF +Y+ YL +IA++ S+E+Q ++ G++ESK+R L+ LE
Sbjct: 691 TEIFSGAKKWSDLFTKHDFFRRYKFYLTVIAATKGSSEEQKKFAGMVESKLRLLVQKLEN 750
Query: 417 NPHINLAHVNPECYTDTTGV--IANGSGSPEITAEGKEEGGENTSPPVSGVA-------- 466
N +INLAH + + V IA E T E T P S A
Sbjct: 751 NENINLAHPFVKTFDQAYLVDSIAQLDSVLEHTGTLSGEEYLKTLTPYSAEAQSDASSEG 810
Query: 467 ------SMWFIGLDFIAANVILNLTYDIQH-----FTNAVHWQATQSKMMKDGMKIEVRH 515
+ ++IGL N + DIQ +T W KD + ++H
Sbjct: 811 KVEVRLTRFYIGLQINLKNQ-RDKKLDIQQPCTEFYTLCQSW----PNFNKDIYSLSIKH 865
Query: 516 VKKKQLSEYLPAHMLKKDKK--TKSGDQNTSAKKRKSDQALDELGDKSRPR 564
VK LP+ + D++ K+ +T +K+ KSD A K RP+
Sbjct: 866 VKLYN----LPSDVYDPDEERPVKTKGDSTHSKRIKSDPA-----GKKRPK 907
>gi|70996294|ref|XP_752902.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|66850537|gb|EAL90864.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|159131656|gb|EDP56769.1| poly(A) polymerase Pap [Aspergillus fumigatus A1163]
Length = 580
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/413 (46%), Positives = 272/413 (65%), Gaps = 5/413 (1%)
Query: 23 SQAPV-TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
S PV +G+T ++ + P +L +L LK N E+ E R +VL L +
Sbjct: 2 STPPVRQWGVTPPISTALPTPEELAANDDLISELKAQNNFESPAETERRKQVLQLLQRVT 61
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
E++K VS K + P E GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS
Sbjct: 62 HEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLIDDFFSD 121
Query: 142 F---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F EK+ + + V +AFVP+IK+ GI ID++FARL + +P ++DL+++
Sbjct: 122 FPPVLEKMAPPGAIEKMTPVPDAFVPIIKLELSGISIDLIFARLIVSSVPLNLDLKNNDY 181
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L+ LD+K VRSLNG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+W
Sbjct: 182 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR+CQLYP+A S +V KFF + ++W WPQPVLLK ++ L VW+P++ DR
Sbjct: 242 AMLVARVCQLYPHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDR 301
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
+HLMPIITPAYP +T N+S+ST+ ++ E ++G I + I+ + W+ LF +FFT
Sbjct: 302 FHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFFT 361
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ Y++YL + ASS + E + W GL+ESK+RHL+G L+R P I +AH P+ +
Sbjct: 362 QDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKPTIAVAHPFPKGF 414
>gi|58220773|gb|AAW68018.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 652
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 228/589 (38%), Positives = 324/589 (55%), Gaps = 42/589 (7%)
Query: 40 PNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVA 99
P DL +T EL + L + E +EE + R EVL +++ +VKEW+K+V+I K +
Sbjct: 2 PTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKGYSEQMV 61
Query: 100 EKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD-YFSSFFEKLKTVDEVTDLRAV 158
++ ++TFGSYRLGVH GADIDALC+ P +V R + +F + + L ++EVT+L+ V
Sbjct: 62 KEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVTLYGALSEMEEVTELQPV 121
Query: 159 EEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDE 218
+A VPV+K F G+ ID+L+A ++L IP D D+ +L ++D+ VRSLNGCRV D+
Sbjct: 122 PDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNGCRVADQ 181
Query: 219 ILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLV 278
ILRLVPN E FR LR +K WA++ G+YSNV G LGGVSWA+LVAR+CQLYPNA S LV
Sbjct: 182 ILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNAVPSMLV 241
Query: 279 CKFFLVFSQWKWPQPVLLKKPDN-VNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFN 337
+FF VF+QW+WP PV+L +N NLGF VWDPR N DR H+MPIITPAYP NS++N
Sbjct: 242 SRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNSSYN 301
Query: 338 VSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQL 397
VS ST ++ E+F+ G I ++I K W LFE FF Y YLV+ + +D
Sbjct: 302 VSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVADDDDDLR 361
Query: 398 EWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEITAEGKEEGGE 456
W G IES++R L +ER+ L H NP Y D
Sbjct: 362 LWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYAD------------------------ 397
Query: 457 NTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHV 516
P + +++GL I +DI+ + + K GM + V HV
Sbjct: 398 ---PSIQCAHCAFYMGLSRKEGMKIRGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHV 454
Query: 517 KKKQLSEYLPAHMLKKDKKTK--SGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLSD 574
+KK++ Y+ +K + +Q + K S+ + + + DS +D
Sbjct: 455 RKKEIPLYVFEQGCQKTRPPTPICAEQQDRSGKNDSEVCTTTVSLVGQLKRKYDSVGGAD 514
Query: 575 KVNNISNNGDQSSSECTEDNSLSQVYGLNDSVADSIDNSLDDLSSTSPH 623
V++ + S S E+ S+ L+D + N STSPH
Sbjct: 515 -VDSFKSVRRASVSPACEEASIQ----LHDDANFGLTN-----CSTSPH 553
>gi|378730028|gb|EHY56487.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 611
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/414 (47%), Positives = 272/414 (65%), Gaps = 10/414 (2%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P AP +G++ ++ + P LD ++T EL E LK N E +E RM L+ LN +
Sbjct: 4 PGQSAPKQWGVSPPISTALPEPLDNEKTAELIEELKRENNYEPMDETKKRMSTLALLNRV 63
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFS 140
+E+++EVS + +PP+ ++ GGKIY +GSYRLGV G+DID L VAPRHV R D+F
Sbjct: 64 TQEFVREVSRRQRLPPSQIDQFGGKIYPYGSYRLGVFGPGSDIDTLAVAPRHVTREDFFE 123
Query: 141 SF---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDDMDLRDD 196
F E++ VT L AV ++FVP+IK+ +GIEID++FA +A L+ IP D+ L D+
Sbjct: 124 YFPAVLERMAGPGAVTSLTAVPDSFVPIIKLVLNGIEIDLIFASIASLQTIPKDLTLNDN 183
Query: 197 MLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
LL LDQ VR++ G RVTDEIL LVP + FR ALR IKLWA++ IY+N++GY GGV
Sbjct: 184 NLLMGLDQPTVRAVTGPRVTDEILSLVPEHKTFRTALRAIKLWAQRRAIYANIVGYPGGV 243
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK-----KPDNVNLGFPVWDP 311
+WAMLVAR+CQLYP+A +T+V KFF V S W WP PV+LK K ++N GF VW+P
Sbjct: 244 AWAMLVARVCQLYPHAVGATIVDKFFFVISHWDWPTPVMLKDIEQLKNADLNKGFRVWNP 303
Query: 312 RVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLF 371
+ DR ++MPIITPA+P +T+N+S S + ++ E K+G I+ I+ GK W LF
Sbjct: 304 AIYPGDRKNIMPIITPAFPSMCATYNISKSGKKVILNELKRGGEITNKIFAGKAKWSDLF 363
Query: 372 ETPNFFTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+ FFT +++YL + ASS++A+ W GL+ESKVR + LE P I LA
Sbjct: 364 KKHTFFTADHKYYLSITASSLNADSAKAWAGLVESKVRIFVMQLEGIPDIELAR 417
>gi|119494846|ref|XP_001264225.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
gi|119412387|gb|EAW22328.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
Length = 603
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/413 (46%), Positives = 272/413 (65%), Gaps = 5/413 (1%)
Query: 23 SQAPV-TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
S PV +G+T ++ + P +L +L LK N E+ E R +VL + +
Sbjct: 2 STPPVRQWGVTPPISTALPTSEELAANDDLISELKAQNNFESPAETERRKQVLQLIQRVT 61
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
E++K VS K + P E GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS
Sbjct: 62 HEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLIDDFFSD 121
Query: 142 F---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F EK+ + + V +AFVP+IK+ GI ID++FARL + +P ++DL+++
Sbjct: 122 FPPVLEKMAPPGAIEKMTPVPDAFVPIIKLELSGISIDLIFARLIVSSVPLNLDLKNNDY 181
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L+ LD+K VRSLNG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+W
Sbjct: 182 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR+CQLYP+A S +V KFF + ++W WPQPVLLK ++ L VW+P++ DR
Sbjct: 242 AMLVARVCQLYPHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDR 301
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
+HLMPIITPAYP +T N+S+ST+ ++ E ++G I + I+ + W+ LF +FFT
Sbjct: 302 FHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFFT 361
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ Y++YL + ASS + E + W GL+ESK+RHL+G L+R P I +AH P+ +
Sbjct: 362 QDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKPTIAVAHPFPKGF 414
>gi|365991615|ref|XP_003672636.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
gi|343771412|emb|CCD27393.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/424 (46%), Positives = 283/424 (66%), Gaps = 9/424 (2%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++++ + + EL + LK N ET++E ++R++VL L L + ++ +V
Sbjct: 7 YGITGPVSIAQSTAAENKLNDELVQELKKENSFETEQETANRVKVLEILQKLTENFVFKV 66
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S KN+ +A+ GGK++TFGSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 67 SKNKNMSDGMAKDSGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVTREDFFTVFDSLLRE 126
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
E+ ++ V +AFVPVIK+ F GI ID+L ARL + ++P ++ L D LL+NLD+K +R
Sbjct: 127 RPELEEIAPVPDAFVPVIKVKFSGISIDLLCARLDIAQVPLNLTLSDKNLLRNLDEKELR 186
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
+LNG RVTDEIL LVP FR+ LR IKLWA++ IY+NV G+ GGV+WAMLVARICQL
Sbjct: 187 ALNGTRVTDEILELVPKPNVFRITLRAIKLWAQRRAIYANVFGFPGGVAWAMLVARICQL 246
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ ++ +FF +FS+WKWPQPV+LK ++ L VW+P++ DR H MP+ITPA
Sbjct: 247 YPNACSAVVLNRFFKIFSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPA 306
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N++ ST+TI+ +EF +G ++ DI++ K W LF+ FF +Y+ YL + A
Sbjct: 307 YPSMCATHNITESTKTIILKEFARGVQVTNDIFSNKGNWGDLFKKHTFFYEYKFYLTITA 366
Query: 389 SSVSA-EDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE------CYT--DTTGVIAN 439
S+ E+ L+W GL+ESK+R LI LE P INLAH + CYT + + I N
Sbjct: 367 STRGTDEEHLKWSGLVESKLRLLILKLEALPGINLAHPYTKPFESTYCYTTDEESKTILN 426
Query: 440 GSGS 443
GS
Sbjct: 427 DYGS 430
>gi|402226328|gb|EJU06388.1| polymerase [Dacryopinax sp. DJM-731 SS1]
Length = 620
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 267/401 (66%)
Query: 24 QAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKE 83
Q V +G T ++ +PP + +++ T L E L E++EE R +VL ++ LVK+
Sbjct: 4 QEQVQWGTTKPISWNPPQEKEIKATERLMEELHHQGSFESEEEGRLREQVLGRIAGLVKQ 63
Query: 84 WIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFF 143
++++VS++ A+ G KI+T GSYRLGVH G+DID +CV P+HV R +F+ F
Sbjct: 64 FVEKVSVSFGFSEEAAKAAGAKIFTSGSYRLGVHGPGSDIDTICVVPKHVSREHFFTVFE 123
Query: 144 EKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLD 203
L ++ VT++ V EAFVPVIK GI +D LFARL L +IPDD++L+DD LL+NLD
Sbjct: 124 PMLLNMEGVTEVSGVPEAFVPVIKAIVSGIHVDFLFARLNLTQIPDDLELKDDNLLRNLD 183
Query: 204 QKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVA 263
++ VRSL G RVTDEILRLVP FR ALR +KLWA++ IYSNV+G+LGGV+WAMLVA
Sbjct: 184 ERDVRSLGGSRVTDEILRLVPQPVVFRDALRAVKLWAQRRAIYSNVIGFLGGVAWAMLVA 243
Query: 264 RICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMP 323
RICQL+P A++++ +FF + QW WPQP+LLK ++ L VW+P++ +DR HLMP
Sbjct: 244 RICQLFPKYDAASILSRFFHIIGQWAWPQPILLKAIEDGPLNVRVWNPQIYPSDRTHLMP 303
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHY 383
IITPAYP +T NV+ ST IMQ E ++G I E I W LFE +FF YR+Y
Sbjct: 304 IITPAYPSMCATHNVTHSTMKIMQNELRRGSQIVEKIIQAGEPWANLFEKHDFFHMYRYY 363
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
L +I +S + E +W G +ESK+R L+G LE + +AH
Sbjct: 364 LQIIITSGNQEMYHKWAGTVESKIRLLVGKLELQEAVEIAH 404
>gi|366987349|ref|XP_003673441.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
gi|342299304|emb|CCC67054.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/397 (47%), Positives = 273/397 (68%), Gaps = 1/397 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++++ P + + EL + LK N ET++E ++R++VL L L ++++ +V
Sbjct: 7 YGITGPVSVAGPTAPENKLNDELIQELKKENSFETEQETANRVKVLETLQMLTEKFVFQV 66
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S KN+ +A+ GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 67 SKNKNMSDGMAKDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDALLRE 126
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
DE+ ++ V +AFVP+IKM F GI ID++ ARL + ++P ++ L D LL+NLD+K +R
Sbjct: 127 RDELDEIAPVPDAFVPIIKMKFSGISIDLICARLDIAQVPLNLTLSDKNLLRNLDEKDLR 186
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
+LNG RVTDEIL LVP FR+ALR IKLWA++ IY+N+ G+ GGV+WAMLVARICQL
Sbjct: 187 ALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAIYANIFGFPGGVAWAMLVARICQL 246
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ ++ +FF + S+WKWPQPV+LK ++ L VW+P++ DR H MP+ITPA
Sbjct: 247 YPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPA 306
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N++ ST+ ++ EEF +G ++ DI++ K W LF+ +FF KY+ YL +
Sbjct: 307 YPSMCATHNITESTKKVILEEFARGIQVTNDIFSNKGTWADLFQKHDFFYKYKFYLTITV 366
Query: 389 SSV-SAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
S+ S E+ L+W GL+ESK R L+ LE I LAH
Sbjct: 367 STKGSDEEHLKWSGLVESKTRLLVLKLEALAGIKLAH 403
>gi|290990211|ref|XP_002677730.1| predicted protein [Naegleria gruberi]
gi|284091339|gb|EFC44986.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/526 (39%), Positives = 310/526 (58%), Gaps = 42/526 (7%)
Query: 32 TTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIA 91
+T ++ + P Q DL + + E LK N +DEE R EVL+KL+ ++K W+K+V +
Sbjct: 4 STVISAALPTQKDLTNSEAIMEILKKENRFPSDEENKKREEVLAKLDGIIKGWVKQVCLK 63
Query: 92 KNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE 151
+ + G K+ TFGS+RLGVH GADID LC+ P V++ F+ + LK E
Sbjct: 64 QGLSEEFVSSAGSKLVTFGSFRLGVHGPGADIDTLCIVPNMVEKHHCFTDLHDILKLRPE 123
Query: 152 VTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLN 211
+ +L+ V +A+VP+I M FDG+EID+LFARL+ IP D+D+ D+ LK+ D + RSLN
Sbjct: 124 IAELKPVPDAYVPLITMVFDGVEIDLLFARLSRTVIPADLDILDESNLKDADDETQRSLN 183
Query: 212 GCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPN 271
G RV D+IL+LVPN ENFR LR IKLWA + IY N++GYLGGV++A+L A+ICQ+YPN
Sbjct: 184 GPRVADQILKLVPNQENFRTTLRCIKLWATRRAIYGNIVGYLGGVAYAILTAKICQMYPN 243
Query: 272 AAASTLVCKFFLVFSQWKWPQ-PVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYP 330
AA STL+ KFF V+ QW W + PVLL+ + L F VW+P++N D+ HLMPIITP+YP
Sbjct: 244 AAPSTLLTKFFTVYQQWNWGKVPVLLRPIEEGTLNFKVWNPKLNPRDKQHLMPIITPSYP 303
Query: 331 QQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASS 390
NSTFNVS +T M+ EF++G +I++ NG W+ LFE +FF +Y +YL + ++
Sbjct: 304 CMNSTFNVSKTTLKDMKNEFERGASITQKAENGLENWETLFEATDFFVRYSNYLQVEINT 363
Query: 391 VSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEG 450
+ D L+W G I+SKVR LI LE P + + H+ P+ + + G
Sbjct: 364 SNEVDHLKWIGFIQSKVRFLIPKLEAVPGLTI-HIYPDYFHNNQG--------------- 407
Query: 451 KEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMK 506
+S ++IGL++ ++NL I F + W M K
Sbjct: 408 ------------GAFSSYFYIGLEYKQTKPGEGSVVNLASCIAEFEELLTWPDKNENMEK 455
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQ 552
+++ +K+ + E++ + K K + A+KRK++Q
Sbjct: 456 P----KIQPIKRNAIPEFVISKK-----KKKELMKKNKAQKRKAEQ 492
>gi|254578066|ref|XP_002495019.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
gi|238937909|emb|CAR26086.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
Length = 567
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/398 (47%), Positives = 269/398 (67%), Gaps = 1/398 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
YG+T ++ + P + + EL + LK E+++E ++R++VL L L +E++
Sbjct: 6 VYGITGPVSTAGPTAAENKLNDELIQELKKEGSFESEQETANRIKVLKILQELAQEFVYR 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A GGKI+TFGSYRLGVH G+DID L V P+HV R D+F+ E L+
Sbjct: 66 VSKKKNMSDGMARDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVMREDFFTVLDEILR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+ E+ ++ V +AFVP+IK+ F GI ID++ A+L L +IP + L D LL+NLD+K +
Sbjct: 126 SRPELEEIAPVPDAFVPIIKIKFSGISIDLICAKLDLAQIPQSLTLSDKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA + IY+NV G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILELVPKPIVFRIALRAIKLWANRRAIYANVFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF + S+WKWPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 246 LYPNATSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ +E + G +I+ DI++ K W LF NFF KY+ YL ++
Sbjct: 306 AYPSMCATHNITESTKRVILQELENGISITNDIFSNKKTWSDLFTKHNFFYKYKFYLTVM 365
Query: 388 ASSVSA-EDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
AS+ E+ L+W G++ESKVR L+ LE P I LAH
Sbjct: 366 ASTRGTDEENLKWSGMVESKVRLLVLKLEALPGIKLAH 403
>gi|324975487|gb|ADY62671.1| PAPa [Candida metapsilosis]
Length = 547
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/398 (46%), Positives = 266/398 (66%), Gaps = 1/398 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+YG+T ++ + P + L LK E++ R EVLS LV+E++ E
Sbjct: 4 SYGVTGPISTADPTAKEFSLNESLIHELKGRGSFESESATKKRAEVLSLFQTLVQEFVYE 63
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS +KN+ ++ GGKI+TFGSYRLGV+ +DIDAL V PRHV R D+F++F + ++
Sbjct: 64 VSKSKNMSDGMSRDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTREDFFTTFDQIIR 123
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ FDGI +D++ ARL + +P DM L D LLKNLD++ +
Sbjct: 124 KRPELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDL 183
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL+LVP F+ ALR IKLWA++ +Y NV G+ GGV+WAML ARICQ
Sbjct: 184 RSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQ 243
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA +S +V KFF ++++W WPQPVLLK ++ L VW+PR+ DR H MP+ITP
Sbjct: 244 LYPNAVSSVIVEKFFSIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRLHRMPVITP 303
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ +E +G ++ + I+ G+ W LFE NFF +YR YL ++
Sbjct: 304 AYPSMCATHNITSSTQKVIIQELLRGASVMKSIFEGEKTWSDLFERHNFFHRYRFYLCVV 363
Query: 388 ASSV-SAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
A++V SAE+ +W G +ESK+R L+ LE I +AH
Sbjct: 364 AATVDSAEEHHKWHGFVESKLRQLVLKLESTEGIEIAH 401
>gi|121700911|ref|XP_001268720.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
gi|119396863|gb|EAW07294.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
Length = 598
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/413 (46%), Positives = 270/413 (65%), Gaps = 5/413 (1%)
Query: 23 SQAPV-TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
S PV +G+T ++ + P +L +L LK N E+ E R +VL L +
Sbjct: 2 STPPVRQWGVTPPISTALPTSDELAANDDLISELKTQNNFESPAETERRKQVLQLLQRVA 61
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
E++K VS K + P E GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS
Sbjct: 62 LEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLIDDFFSD 121
Query: 142 F---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F EK+ + + V +AFVP+IKM GI ID++FARL + +P ++DL+++
Sbjct: 122 FPPVLEKMAPPGAIEKMTPVPDAFVPIIKMELSGISIDLIFARLIVSSVPLNLDLKNNDY 181
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L+ LD+K VRSLNG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+W
Sbjct: 182 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR+CQLYP A S +V KFF + ++W WPQPVLLK ++ L VW+P++ DR
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDR 301
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
+HLMPIITPAYP +T NVS+ST+ ++ E ++G I + I+ + W+ LF +FFT
Sbjct: 302 FHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQMTWNDLFARHSFFT 361
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ Y++YL + ASS + E + W GL+ESK+RHL+G L+R I +AH P+ +
Sbjct: 362 QDYKYYLSITASSKTKEAESVWSGLVESKIRHLVGALDRKNTIAVAHPFPKGF 414
>gi|50304345|ref|XP_452122.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641254|emb|CAH02515.1| KLLA0B13255p [Kluyveromyces lactis]
Length = 598
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/553 (39%), Positives = 319/553 (57%), Gaps = 40/553 (7%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ P + L + LK ET+EE R+ VL L +E++ +V
Sbjct: 7 FGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQEFVYQV 66
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S KN+ +A GGK++TFGSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 67 SKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSREDFFTVFDALLRE 126
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
E+ ++ +V +AFVP+IK+ F+GI ID++FA+L L ++P + L D LL+N+D+K +R
Sbjct: 127 RPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDEKDLR 186
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
+LNG RVTDEIL LVPN +F++ALR IK+WAK+ +Y+NV G+ GGV+WAM V RICQL
Sbjct: 187 ALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVRICQL 246
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ ++ KFF + S+WKWPQPVLLK ++ L VW+P++ DR H MP+ITPA
Sbjct: 247 YPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPVITPA 306
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL-VLI 387
YP +T N+S ST+ ++ E ++G +++ I++ + W+ LF+ +FF KY+ YL V++
Sbjct: 307 YPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEDLFKKHDFFFKYKFYLTVMV 366
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY--------TDTTGVIAN 439
++ S E L+W G +ESK+R L+ LE P INLAH E Y D I N
Sbjct: 367 STKGSDEQHLKWSGFVESKLRLLVQKLEVLPGINLAHPFIEPYESSYIYNNEDEYKEIMN 426
Query: 440 GSGS----------PEITAEGKEEGGENTSPPVSGVASMWFIGLDF-----------IAA 478
G+ +IT K++ S V +A+M FIGLD I
Sbjct: 427 NYGTHKTEGVLKKFTKITDANKDDEASKNSNQVH-IATM-FIGLDINTEESKKIDIHIPC 484
Query: 479 NVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKS 538
NL + + + + + + EV Q E P KK K KS
Sbjct: 485 QEFFNLCRSLPDYEDPETYSLIIKYVKVHDLPDEVY-----QEGETRPVKSSKKRKPEKS 539
Query: 539 GDQNTSAKKRKSD 551
G++ +K+ KSD
Sbjct: 540 GEK---SKRPKSD 549
>gi|45185228|ref|NP_982945.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|44980886|gb|AAS50769.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|374106148|gb|AEY95058.1| FABL002Cp [Ashbya gossypii FDAG1]
Length = 598
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/397 (46%), Positives = 270/397 (68%), Gaps = 1/397 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ P + + EL + LK E++EE + R++VL +L L +E++ +V
Sbjct: 7 YGVTGPISKEGPTAAENKLNDELIQELKKEGTFESEEETAKRIKVLEELQALAQEFVFKV 66
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +N+ +A GGKI+TFGSYRLGVH G+DID L V P+HV R D+F+ F E L+
Sbjct: 67 SRKRNMSEGMARDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVTRDDFFTVFDELLRA 126
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
E+ ++ V EAFVP+IK+ + GI ID++ ARL + ++P ++ L D LL+NLD+K +R
Sbjct: 127 RPELDEIAPVPEAFVPIIKIKYSGISIDLICARLDIPQVPLNLTLSDKNLLRNLDEKDLR 186
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
+LNG RVTDEIL LVP F++ALR IKLWA++ +Y+NV G+ GGV+WAMLVARICQL
Sbjct: 187 ALNGTRVTDEILELVPKPTAFKIALRAIKLWAQRRAVYANVFGFPGGVAWAMLVARICQL 246
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ +V +FF + ++W WPQPVLLK ++ L VW+P++ DR H MP+ITPA
Sbjct: 247 YPNACSAVIVARFFHILTRWSWPQPVLLKPIEDGPLQVRVWNPKIYANDRLHKMPVITPA 306
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP ST N+ ST+ ++ E ++G ++ DI+ K W LF+ +FF KY+ YL ++A
Sbjct: 307 YPSMCSTHNICESTKKVILNELQRGVEVTTDIFTNKKTWGDLFQKHDFFYKYKFYLTVMA 366
Query: 389 SSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAH 424
S+ +++Q L+W GL+ESK+R L+ LE INLAH
Sbjct: 367 STKGSDEQHLKWSGLVESKLRLLVLKLEVLSGINLAH 403
>gi|134107007|ref|XP_777816.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260514|gb|EAL23169.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 643
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 227/549 (41%), Positives = 322/549 (58%), Gaps = 26/549 (4%)
Query: 23 SQAPVTY-GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
S PV + G+T + PP D++ + L L N E+D+E R +LS + LV
Sbjct: 3 SNPPVKFLGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLV 62
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
+++ +VSI + +A + GG+IYT GSYRLGVH G+DID +CV PRH+ R +F
Sbjct: 63 AKFVHDVSIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREHFFGE 122
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F + L+ VT++ AVE AFVPV+K G+E+D+LFAR+ L E D +D+ D +L+
Sbjct: 123 FQDMLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRG 182
Query: 202 LDQKCVRSLN-GCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
+D RSLN G RVTD IL LVP++ FR ALRTI+LWAK+ GIYSNVLG+ GGV+WA+
Sbjct: 183 VDDASQRSLNAGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWAL 242
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN--VNLGFPVWDPRVNVADR 318
L ARICQLYP AA +T+V KFF ++ QW WPQPVLLKK DN N+ VW+P+++ D+
Sbjct: 243 LTARICQLYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQ 302
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGK-TMWDKLFETPNFF 377
H MP+ITPAYP ST N++ ST +I+++E + I+++I + W LFE +FF
Sbjct: 303 AHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVDFF 362
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH-----VNPECYTD 432
+ Y+ Y+ ++AS+ +++ +W G++ES++R L+G+LE I AH VN Y
Sbjct: 363 SMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLENTDCIITAHPQVGGVNRVFYCL 422
Query: 433 TTGVIANGSGSPEITAE---GKEEGGENTSPPVSGVASMWFIGLDF-----IAANVILNL 484
T A S E+TAE EE +N S +FIGL+ +LNL
Sbjct: 423 TEEEQAAASQG-ELTAEMIDRTEEDVKNREHRKIYTKS-FFIGLEIEKKSKETGGRVLNL 480
Query: 485 TYDIQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL-PAHMLKKDKKTKSGDQN 542
Y + F W K + M + +R K+ +L Y+ P M K KKTK QN
Sbjct: 481 FYPSKKFCAVCQNW----DKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQN 536
Query: 543 TSAKKRKSD 551
S +D
Sbjct: 537 GSGDAGMND 545
>gi|212531585|ref|XP_002145949.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
gi|210071313|gb|EEA25402.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
Length = 599
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/456 (43%), Positives = 287/456 (62%), Gaps = 11/456 (2%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
+QA +G+T ++++ P +L +L LK N E E R + L + +V
Sbjct: 3 AQATRQWGVTPPISMNLPTPEELAANDDLIAELKAQNNFELPSETERRQQTLQLIQRVVI 62
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
E++K V K + P E GGKI+T+GSYRLGV+ G+DID L VAP+HV D+FS F
Sbjct: 63 EFVKTVGRRKGLSPAALEAAGGKIFTYGSYRLGVYGPGSDIDTLIVAPKHVMIDDFFSDF 122
Query: 143 ---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
E++ + + V +AFVP+IK+ F GI ID++FARL L +P ++DL+++ L
Sbjct: 123 PPILERMSPPGAIEKMTPVPDAFVPIIKLEFSGISIDLIFARLILPSVPLNLDLKNNDYL 182
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+ LD K VRSLNG RVTD+IL LVP + FR+ALR IKLWA++ IYSN++G+ GGV+WA
Sbjct: 183 RGLDDKEVRSLNGTRVTDQILELVPQQKTFRIALRAIKLWAQRRAIYSNIVGFPGGVAWA 242
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
MLVAR+CQLYP A S +V KFF + ++W WPQPVLLK ++ L VW+P++ DR+
Sbjct: 243 MLVARVCQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRF 302
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP +T N+S+ST+ ++ E ++G + + I+ + W+ LF FF+K
Sbjct: 303 HLMPIITPAYPSMCATHNISLSTKAVILRELQRGGDMVDKIFAKQLTWNDLFTRHTFFSK 362
Query: 380 -YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIA 438
Y++YL + ASS + E + W GL+ESK+RHL+G L+R I +AH P+ + V
Sbjct: 363 DYKYYLQITASSKTKEAESVWSGLVESKLRHLVGALDRKNIIAIAHPFPKGFERIHVVKD 422
Query: 439 NG------SGSPEITAEG-KEEGGENTSPPVSGVAS 467
+ +GS + A+G K E + T+ PV A+
Sbjct: 423 DAEAEQVKNGSTKYQAQGTKTETTDETNDPVHTAAA 458
>gi|50557132|ref|XP_505974.1| YALI0F28039p [Yarrowia lipolytica]
gi|49651844|emb|CAG78786.1| YALI0F28039p [Yarrowia lipolytica CLIB122]
Length = 518
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/397 (46%), Positives = 267/397 (67%), Gaps = 1/397 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ +PP ++ EL E LK E++ E + R +VL + L +E++++V
Sbjct: 5 YGITEPISTAPPTPEEIALNGELIEELKRQGSFESEAESNKRKKVLLIMQQLAQEYVRQV 64
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S+ KN +A GGKI+TFGSY LGVH G+DID L V P+HV R D+F F L+
Sbjct: 65 SLKKNFSDGMARDAGGKIFTFGSYSLGVHGPGSDIDTLIVVPKHVTREDFFEVFERLLRE 124
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
E+ ++ AV +AFVP+IK+ F GI ID++ ARL + ++P D+ L DD LL+N+D K +R
Sbjct: 125 RPELEEISAVPDAFVPIIKVKFMGISIDLISARLDIPKVPLDLTLEDDNLLRNVDDKDLR 184
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
+LNG RVTD+ILRLVPN F+ ALR IK+WA+ +Y N++G+ GGV W +LVAR+CQL
Sbjct: 185 ALNGTRVTDDILRLVPNKTVFKHALRVIKIWAQNRAVYGNIMGFPGGVQWGILVARVCQL 244
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA A+ ++ +FF V +W+WPQPVLLKK ++ L VW+PR+ D+ H MPIITPA
Sbjct: 245 YPNAVAAVILSRFFNVLLRWRWPQPVLLKKIEDGPLQARVWNPRIYSQDKLHRMPIITPA 304
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N++ ST+ ++ E ++G I +I G+ W LFE +FF+ Y++YL ++A
Sbjct: 305 YPSMCATHNITASTQKVILRELERGGQILNEIMLGQKPWSALFEKHHFFSDYKYYLSIVA 364
Query: 389 SSV-SAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+S +AE QL+W G +ESK+RHL+ LE I LAH
Sbjct: 365 ASKGTAEQQLKWSGFVESKLRHLVQKLELLDSIELAH 401
>gi|349602954|gb|AEP98933.1| Poly(A) polymerase alpha-like protein, partial [Equus caballus]
Length = 279
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/271 (71%), Positives = 230/271 (84%), Gaps = 1/271 (0%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQW 288
WAMLVAR CQLYPNA ASTLV KFFLVFS+W
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
>gi|354681991|ref|NP_001238935.1| poly(A) polymerase alpha isoform 2 [Homo sapiens]
gi|441666293|ref|XP_004091880.1| PREDICTED: poly(A) polymerase alpha-like [Nomascus leucogenys]
gi|12654217|gb|AAH00927.1| PAPOLA protein [Homo sapiens]
gi|28375483|emb|CAD66560.1| unnamed protein product [Homo sapiens]
gi|119602051|gb|EAW81645.1| poly(A) polymerase alpha, isoform CRA_c [Homo sapiens]
Length = 285
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/271 (71%), Positives = 230/271 (84%), Gaps = 1/271 (0%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQW 288
WAMLVAR CQLYPNA ASTLV KFFLVFS+W
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
>gi|254567353|ref|XP_002490787.1| Poly(A) polymerase [Komagataella pastoris GS115]
gi|238030583|emb|CAY68507.1| Poly(A) polymerase [Komagataella pastoris GS115]
Length = 551
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/398 (45%), Positives = 275/398 (69%), Gaps = 1/398 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T A++ + P+ + + L + L+ E++ R +VL L L +E++
Sbjct: 4 TYGVTPAISTAGPSSEETRLNDLLVDELRRQGSFESEAATLKRAKVLKTLQQLTQEFVYS 63
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS +KN+ +A+ GGKI+TFGSYRLGV+ G+DID L V P+H++R D+F+ F + L+
Sbjct: 64 VSKSKNMDEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVFPKHINREDFFTVFEKILR 123
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++++V +AFVP+IKM FDGI ID++ ARL + +P ++ L D LLKN+D+K +
Sbjct: 124 QRPELEEIQSVPDAFVPIIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDEKDL 183
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP F+ ALR IK+WA++ +Y NV G+ GGV+WAMLVARICQ
Sbjct: 184 RALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVARICQ 243
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ KFF++ QW WPQPVLLK ++ L VW+PR+ D+YH MP+ITP
Sbjct: 244 LYPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITP 303
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ +EF++G I +I++G W LF +FF +Y+ YL +I
Sbjct: 304 AYPSMCATHNITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDFFRRYKFYLTVI 363
Query: 388 ASSV-SAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
A++ S+E+Q ++ G++ESK+R L+ LE N +INLAH
Sbjct: 364 AATKGSSEEQKKFAGMVESKLRLLVQKLENNENINLAH 401
>gi|1377870|gb|AAC52608.1| poly(A) polymerase VI [Mus musculus]
gi|149044214|gb|EDL97596.1| poly (A) polymerase alpha (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 293
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/271 (71%), Positives = 230/271 (84%), Gaps = 1/271 (0%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQW 288
WAMLVAR CQLYPNA ASTLV KFFLVFS+W
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
>gi|392579948|gb|EIW73075.1| hypothetical protein TREMEDRAFT_67196 [Tremella mesenterica DSM
1558]
Length = 648
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/540 (39%), Positives = 313/540 (57%), Gaps = 19/540 (3%)
Query: 27 VTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIK 86
++ G+T ++ PP D+Q + L + L N E+++E R +LS + LV +++
Sbjct: 4 LSTGVTPPISTDPPRPSDIQASEALMKDLIALNQFESEQERKVRERLLSNIAQLVTKFVH 63
Query: 87 EVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
+VSI + VA + GG+IYT GSYRLGVH G+DID +CV PRHV + +F F E L
Sbjct: 64 DVSIKSGLSEKVASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHVFKEHFFGEFKEML 123
Query: 147 KTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKC 206
+ VT++ AVE AFVPV+K G+E+D+LFAR+ L E D +DL D +L+ +D
Sbjct: 124 RAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLAEAGDKLDLEKDEILRGVDDAS 183
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARIC 266
R LNG RVTD IL LVP++ FR ALRTI+LWAK+ GIYSNVLG+ GGV+WA+L ARIC
Sbjct: 184 QRGLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARIC 243
Query: 267 QLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN--VNLGFPVWDPRVNVADRYHLMPI 324
QLYP AA +T+V KFF +F QW WP PVLLKK ++ N+ VW+P+++ D H MPI
Sbjct: 244 QLYPTAAPATIVAKFFPIFYQWGWPNPVLLKKIESGPPNMHHSVWNPKLDRRDMAHRMPI 303
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIY-NGKTMWDKLFETPNFFTKYRHY 383
ITPAYP +T N++ ST ++++ E + +++ I N + W +LFE +FF+ Y+ Y
Sbjct: 304 ITPAYPSMCTTHNITASTMSVIKNEMLRAMQVTDRIMSNPGSSWMELFEQIDFFSMYKSY 363
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGS 443
+ +IAS+ ++E +W G +ES++R L+ +LE + +I AH + T + +
Sbjct: 364 VQVIASASTSEGIKDWGGTVESRIRTLVQDLENSDNIITAHPQMGGISATFLCLTEEEQA 423
Query: 444 PEITAEGKEEGGENTSPPVSG------VASMWFIGLDFI------AANVILNLTYDIQHF 491
E E + T V+G +FIGLD + + +LNL Y + F
Sbjct: 424 AASQGELNVEAMKRTPEDVAGEDYKTVYTKSFFIGLDIAKRSKDGSGSRVLNLLYPSKRF 483
Query: 492 TNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEY-LPAHMLKKDKKTKSGDQNTSAKKRKS 550
A + K + M + +R K+ L Y P + K K K G + +A S
Sbjct: 484 CAACQ---SWDKYDEQEMSVILRPAKRNDLPFYCFPDGLPKPKPKGKRGQPSNAATPSDS 540
>gi|324975502|gb|ADY62684.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/398 (46%), Positives = 266/398 (66%), Gaps = 1/398 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+YG+T ++ + P ++ L + LK E++ R EVLS LV++++ E
Sbjct: 4 SYGVTGPVSTADPTTKEISLNESLIQELKGRGSFESESATKKRAEVLSLFQTLVQQFVYE 63
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VSI+KN+ +A+ GGKI+TFGSYRLGV+ +DIDAL V PRHV R D+F++F + ++
Sbjct: 64 VSISKNMSDGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTREDFFTTFDKIIR 123
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ FDGI +D++ ARL + +P DM L D LLKNLD++ +
Sbjct: 124 QRSELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDL 183
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL+LVP F+ ALR IKLWA++ +Y NV G+ GGV+WAML ARICQ
Sbjct: 184 RSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQ 243
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ +V KFF ++++W WPQPVLLK ++ L VW+PR+ DR H MP+ITP
Sbjct: 244 LYPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITP 303
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL-VL 386
AYP +T N++ ST+ ++ +E +G I + I G+ W LF +FF +YR YL V+
Sbjct: 304 AYPSMCATHNITSSTQKVILQELTRGSNIMKSILEGEKSWSDLFARHDFFHRYRFYLCVV 363
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
A+S SAE+ +W G +ESK+R L+ LE + LAH
Sbjct: 364 AATSESAEEHHKWHGFVESKLRQLVIKLESTEGVELAH 401
>gi|322695698|gb|EFY87502.1| Poly(A) polymerase [Metarhizium acridum CQMa 102]
Length = 570
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/556 (39%), Positives = 312/556 (56%), Gaps = 40/556 (7%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T +++ P + + + + L E L+ E+ + R +VL L + E++K
Sbjct: 6 VFGVTPPISVGLPTEAEKRASDALIEELRRQKTFESPSDTQKRFKVLESLQAICDEFVKR 65
Query: 88 VSIAKNIPPTVAEK-VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---F 143
V+ K V K GK++T+GS+RLGV G+DID L VAP++V R DYF F
Sbjct: 66 VAREKEPKNDVLIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRDDYFKYFPDLL 125
Query: 144 EKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI-PDDMDLRDDMLLKNL 202
E + +TDL AV +AFVP+IK + GI ID++F+R+ K++ PD DL+D LL+ L
Sbjct: 126 EAMAPKGAITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGLLRGL 185
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D+ +RSLNG RVTDEIL LVP F+LALR IKLWA++ +Y N++G+ GGV+WAMLV
Sbjct: 186 DEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLV 245
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR+CQLYP AA S +V KFFLV SQW+WPQPVLLK ++ L VW+P++ D +HLM
Sbjct: 246 ARVCQLYPKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLM 305
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YR 381
P+ITPAYP +TFN+S S+ I+ E ++G ISE I GK W LF FFT Y+
Sbjct: 306 PVITPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKQPWSDLFVKHTFFTSDYK 365
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHV-------NPECYTDTT 434
+Y+ +I++S S E W G +ESKVR L+ LE++P I LAH EC D+
Sbjct: 366 YYISVISASKSKEAHNVWSGYVESKVRMLVQKLEQHPSIALAHAFNKGYERRHECKDDSE 425
Query: 435 ----------GVIANGS--------GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI 476
+I NG S E E G P + +IGL+
Sbjct: 426 IAQVQEGSLDFLIKNGEDCQATAKLKSEEPKHNATENGDTELKRPTEVFTTTHYIGLELE 485
Query: 477 AANVILNLTYDIQHF-TNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
A L+L+Y + F WQ Q + +K + I V+HV+ + + K
Sbjct: 486 EAAKSLDLSYQVNEFKVLCTQWQKYQDE-LKPLVSIGVQHVRNDVFD-------VGEKKP 537
Query: 536 TKSGDQNTSAKKRKSD 551
K G + TS K+ S+
Sbjct: 538 QKKGAKGTSKKRGPSE 553
>gi|242773312|ref|XP_002478214.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
gi|218721833|gb|EED21251.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/450 (43%), Positives = 281/450 (62%), Gaps = 11/450 (2%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++++ P +L +L LK N E E R + L + +V E++K V
Sbjct: 9 WGVTPPISMNLPTPEELAANDDLIAELKAQNNFELPAETERRQQTLQLIQKVVIEFVKTV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
K + P V E GGKI+T+GSYRLGV+ G+DID L VAP+HV D+FS F E+
Sbjct: 69 GRRKGLSPAVLEAAGGKIFTYGSYRLGVYGPGSDIDTLIVAPKHVLIDDFFSDFPPILER 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ + + V +AFVP+IK+ F GI +D++FARL L IP ++DL+++ L+ LD K
Sbjct: 129 MSPPGAIEKMTPVPDAFVPIIKLEFSGISLDLIFARLILPSIPLNLDLKNNDYLRGLDDK 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
VRSLNG RVTD+IL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EVRSLNGTRVTDQILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + ++W WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHTDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T N+S+ST+ ++ E ++G I + I+ + W+ LF FF+K Y++YL
Sbjct: 309 TPAYPSMCATHNISLSTKAVILRELQRGGDIVDKIFAKQLTWNDLFTRHTFFSKDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY------TDTTGVIA 438
+ ASS + E W GL+ESK+RHL+G L+R I +AH P+ + D
Sbjct: 369 QITASSKTKEADSVWSGLVESKLRHLVGALDRKNIIAVAHPFPKGFERIHVVKDDAEAEQ 428
Query: 439 NGSGSPEITAEG-KEEGGENTSPPVSGVAS 467
+GS + A+G K E + T P A+
Sbjct: 429 VKNGSTKYQAQGTKTETTDQTKDPAHTAAA 458
>gi|324975520|gb|ADY62700.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/398 (46%), Positives = 267/398 (67%), Gaps = 1/398 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+YG+T ++ + P ++ L + LK E++ R EVLS LV++++ E
Sbjct: 4 SYGVTGPVSTADPTTKEISLNESLIQELKGRGSFESESATKKRAEVLSLFQTLVQQFVYE 63
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VSI+KN+ +A+ GGKI+TFGSYRLGV+ +DIDAL V PRHV R D+F++F + ++
Sbjct: 64 VSISKNMSDGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTREDFFTTFDKIIR 123
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ FDGI +D++ ARL + +P DM L D LLKNLD++ +
Sbjct: 124 QRPELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDL 183
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL+LVP F+ ALR IKLWA++ +Y NV G+ GGV+WAML ARICQ
Sbjct: 184 RSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQ 243
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ +V KFF ++++W WPQPVLLK ++ L VW+PR+ DR H MP+ITP
Sbjct: 244 LYPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITP 303
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL-VL 386
AYP +T N++ ST+ ++ +E +G +I + I G+ W LF +FF +YR YL V+
Sbjct: 304 AYPSMCATHNITSSTQKVILQELTRGSSIMKSILEGEKSWSDLFARHDFFHRYRFYLCVV 363
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
A+S SAE+ +W G +ESK+R L+ LE + LAH
Sbjct: 364 AATSESAEEHHKWHGFVESKLRQLVIKLESTEGVELAH 401
>gi|406606978|emb|CCH41700.1| poly(A) polymerase [Wickerhamomyces ciferrii]
Length = 572
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/398 (47%), Positives = 270/398 (67%), Gaps = 1/398 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+YG+T ++L+ P + +L + LK E++ E R+EVL L NL ++ +
Sbjct: 6 SYGVTPPISLAGPTPAENVLNDQLIQELKKQGNFESESETKKRIEVLQLLQNLATNFVYK 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A+ GGKI+T+GSYRLGV+ G+DID L V P+HV R D+F+ F E L+
Sbjct: 66 VSKNKNMSEGMAKDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVTRDDFFTVFDELLR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
T E+ ++ V +AFVP+IK+ GIEID+++A+L L ++P ++ L D LL+NLD+K +
Sbjct: 126 TRSELEEIAPVPDAFVPIIKVKISGIEIDLIYAKLDLPQVPINLTLGDKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL+LVP F+L+LR IKLWA++ IY+N+ G+ GGV+WAMLVARICQ
Sbjct: 186 RSLNGTRVTDEILQLVPKPVVFKLSLRAIKLWAQRRAIYANIFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA +S +V KFF + +QW WPQPVLLK ++ L VW+PRV DR H MP+ITP
Sbjct: 246 LYPNAVSSVIVSKFFHILTQWNWPQPVLLKPIEDGPLQVRVWNPRVYPQDRQHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ E ++G I DI + K W+ LF +FF KY+ YL +I
Sbjct: 306 AYPSMCATHNITASTQKVILNELQRGSLIMNDIISHKKQWEDLFVKHDFFYKYKFYLNII 365
Query: 388 ASSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAH 424
A + ++Q L+W GL+ESK+R L+ LE INLAH
Sbjct: 366 AFTRGDDEQHLKWSGLVESKLRLLVQKLENFQGINLAH 403
>gi|255723652|ref|XP_002546758.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
gi|240130534|gb|EER30100.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
Length = 557
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/548 (39%), Positives = 324/548 (59%), Gaps = 29/548 (5%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T+G+T ++++ P + + L + LK E++ R+EVL+ L + ++++ +
Sbjct: 5 TFGVTPPISVANPTAKENELNDLLIKELKQRGSFESETATKKRVEVLNILQKMTEDFVFK 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VSI KN+ +A+ GGKI+TFGSYRLGV+ G+DID L V P+HV R D+F +F+E LK
Sbjct: 65 VSIKKNMSEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLIVVPKHVTRNDFFETFYELLK 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
T DE+ ++ V +AFVP+IK+ F GI ID++FARL + + D+ L D LLKN+D+K +
Sbjct: 125 TRDELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVSRDLTLDDKNLLKNIDEKDL 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP F+ ALR IK+WA++ IY+NV G+ GGV+WAMLVARICQ
Sbjct: 185 RALNGTRVTDEILTLVPKQTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ KFF ++SQW WPQPVLLK+ ++ L VW+P++ DR H MP+ITP
Sbjct: 245 LYPNAVSAVIIEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPKLYAPDRQHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ EF++G I I +G W LFE +FF +Y+ YL ++
Sbjct: 305 AYPSMCATHNITSSTQKVILSEFQRGIEIMNGINSGSKTWSDLFERHDFFFRYKFYLCIV 364
Query: 388 ASSVS-AEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTD--------TTGVIA 438
A++ S +E+ L++ G++ESK+R L+ LE I LAH + + D +
Sbjct: 365 AATKSNSEEHLKYGGMVESKLRLLVQKLELVEGIELAHPYVKTFEDGFLCKDSEEVSAVV 424
Query: 439 NGSGSPE--------ITAEGKEEGGENTSPPVSGVASMWFIGLDF---IAANVILNLTYD 487
N G+ E A+ ++ E V + FIGL L++ Y
Sbjct: 425 NSYGTLEGESLTKSIPRADSIKKDEEKQESKVEVHLTKLFIGLKIDLQKDTGKKLDIQYP 484
Query: 488 IQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSE--YLPAHM--LKKDKKTKSGDQN 542
F N WQ S + I+++ VK LS Y+ + K K+ +S +N
Sbjct: 485 CTEFFNICKGWQDYDS----EKHFIQIKKVKLHDLSNDVYIEGEIRPTKVAKRKRSASKN 540
Query: 543 TSAKKRKS 550
KK KS
Sbjct: 541 DGKKKPKS 548
>gi|317140350|ref|XP_001818141.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
gi|391870730|gb|EIT79906.1| poly(A) polymerase [Aspergillus oryzae 3.042]
Length = 599
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/406 (46%), Positives = 266/406 (65%), Gaps = 4/406 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ P +L +L LK N E+ E R L + + E++K V
Sbjct: 9 WGVTPPISTVLPTPDELAANDDLISELKLQNNFESPAETEHRKNTLQLIQRVTVEFVKVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + P E GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS F E+
Sbjct: 69 SRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLIVGPKHVVIDDFFSDFPPVLER 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ V + V +AFVP+IK+ F GI ID+++ARL + +P ++DL+++ L+ LD+K
Sbjct: 129 MAPQGAVEKMTPVPDAFVPIIKLEFSGISIDLIYARLIVPSVPLNLDLKNNDYLRGLDEK 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
VRSLNG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + ++W WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+T++ E ++G I + I+ + W+ LF +FFT+ Y++YL
Sbjct: 309 TPAYPSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFTRDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ ASS + E + W GL+ESK+RHL+G L+R I +AH P+ +
Sbjct: 369 SITASSRTKEAEAVWSGLVESKIRHLVGALDRKSTIAVAHPFPKGF 414
>gi|238882575|gb|EEQ46213.1| Poly(A) polymerase [Candida albicans WO-1]
Length = 558
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/407 (45%), Positives = 275/407 (67%), Gaps = 1/407 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++ + P + L + LK E+++ R+EVL+ LV+E++
Sbjct: 5 TYGVTEPISTNGPTPKENILNDALIQELKNRGSFESEQATKKRVEVLTLFQRLVQEFVYT 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS +KN+ ++A+ GGK++TFGSYRLGV+ G+DID L V P+HV R D+FS F + ++
Sbjct: 65 VSKSKNMSDSMAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRDDFFSVFADIIR 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +A+VP+IK+ FDGI ID++ ARL + +P D+ L D LLKNLD+K +
Sbjct: 125 KRPELEEIACVPDAYVPIIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLDEKDL 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL+LVP F+ ALR IKLWA++ +Y N+ G+ GGV+WAMLVARICQ
Sbjct: 185 RSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA +S +V KFF ++++W WP+PVLLK ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ E +G +I ++I+ GK W LFE +FF KY+ YL ++
Sbjct: 305 AYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSFFYKYKFYLCVV 364
Query: 388 ASSV-SAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDT 433
A+S+ SAE+ +W G IESK+R L+ LE + +AH + +++T
Sbjct: 365 AASIDSAEEHKKWSGFIESKLRQLVLKLEVAEGVEIAHPYVKDFSNT 411
>gi|68482706|ref|XP_714750.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
gi|3334283|sp|O42617.1|PAP_CANAL RecName: Full=Poly(A) polymerase PAPalpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|2696030|dbj|BAA23802.1| poly A polymerase [Candida albicans]
gi|5771514|gb|AAD51412.1| unknown [Candida albicans]
gi|46436342|gb|EAK95706.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
Length = 558
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/407 (45%), Positives = 275/407 (67%), Gaps = 1/407 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++ + P + L + LK E+++ R+EVL+ LV+E++
Sbjct: 5 TYGVTEPISTNGPTPKENILNDALIQELKNRGSFESEQATKKRVEVLTLFQRLVQEFVYT 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS +KN+ ++A+ GGK++TFGSYRLGV+ G+DID L V P+HV R D+FS F + ++
Sbjct: 65 VSKSKNMSDSMAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRDDFFSVFADIIR 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +A+VP+IK+ FDGI ID++ ARL + +P D+ L D LLKNLD+K +
Sbjct: 125 KRPELEEIACVPDAYVPIIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLDEKDL 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL+LVP F+ ALR IKLWA++ +Y N+ G+ GGV+WAMLVARICQ
Sbjct: 185 RSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA +S +V KFF ++++W WP+PVLLK ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ E +G +I ++I+ GK W LFE +FF KY+ YL ++
Sbjct: 305 AYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSFFYKYKFYLCVV 364
Query: 388 ASSV-SAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDT 433
A+S+ SAE+ +W G IESK+R L+ LE + +AH + +++T
Sbjct: 365 AASIDSAEEHKKWSGFIESKLRQLVLKLEVAEGVEIAHPYVKDFSNT 411
>gi|238484201|ref|XP_002373339.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
gi|83765996|dbj|BAE56139.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701389|gb|EED57727.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
Length = 609
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/406 (46%), Positives = 266/406 (65%), Gaps = 4/406 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ P +L +L LK N E+ E R L + + E++K V
Sbjct: 9 WGVTPPISTVLPTPDELAANDDLISELKLQNNFESPAETEHRKNTLQLIQRVTVEFVKVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + P E GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS F E+
Sbjct: 69 SRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLIVGPKHVVIDDFFSDFPPVLER 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ V + V +AFVP+IK+ F GI ID+++ARL + +P ++DL+++ L+ LD+K
Sbjct: 129 MAPQGAVEKMTPVPDAFVPIIKLEFSGISIDLIYARLIVPSVPLNLDLKNNDYLRGLDEK 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
VRSLNG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + ++W WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+T++ E ++G I + I+ + W+ LF +FFT+ Y++YL
Sbjct: 309 TPAYPSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFTRDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ ASS + E + W GL+ESK+RHL+G L+R I +AH P+ +
Sbjct: 369 SITASSRTKEAEAVWSGLVESKIRHLVGALDRKSTIAVAHPFPKGF 414
>gi|156843263|ref|XP_001644700.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115348|gb|EDO16842.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 572
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/472 (42%), Positives = 296/472 (62%), Gaps = 25/472 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ + P + + EL + LK E+++E + R++VL L +E++ V
Sbjct: 7 YGITGPVSTASPTAAENKLNDELIQELKKEGSFESEQETAKRVKVLEIFQQLAQEFVYRV 66
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+ +A+ GGK++TFGSYRLGVH G+DID L V P+HV R D+F+ F E L+
Sbjct: 67 SKSKNMSDGMAKDSGGKVFTFGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDELLRK 126
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
E+ ++ V +A+VP+IK FDGI ID++ ARL + ++P + L D LL+NLD+K +R
Sbjct: 127 RKELEEIAPVPDAYVPIIKTKFDGISIDLICARLDVAQVPQTLTLSDKNLLRNLDEKDLR 186
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y NV G+ GGV+WAMLVARICQL
Sbjct: 187 ALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARICQL 246
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ ++ +FF + S+WKWPQPV+LK ++ L VW+P++ DR H MP+ITPA
Sbjct: 247 YPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRCHRMPVITPA 306
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N++ ST+ ++ +EF++G I+ +I++ K W+ LF+ FF Y+ YL + A
Sbjct: 307 YPSMCATHNITESTKKVILKEFERGVEITNNIFSNKATWEDLFKRHTFFHDYKFYLTVTA 366
Query: 389 SSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAH--VNP----ECYT---------D 432
S+ ++Q L+W GL+ESKVR LI LE P I AH V P CY+ D
Sbjct: 367 STKGNDEQHLKWSGLVESKVRLLILKLEALPGIKSAHPYVKPFESTYCYSTDEECKDIVD 426
Query: 433 TTGVIANGSGSPEITAEGKEEGGENTSPPVSG-----VASMWFIGLDFIAAN 479
+ G S + T +E + +P + G + +M +IGLD N
Sbjct: 427 SYGTYKTESSLEKYTKVTEE---NSNAPSIEGKLQVHITTM-YIGLDVNVEN 474
>gi|67517193|ref|XP_658478.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|40746747|gb|EAA65903.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|259488841|tpe|CBF88615.1| TPA: poly(A) polymerase Pap (AFU_orthologue; AFUA_1G15340)
[Aspergillus nidulans FGSC A4]
Length = 601
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/415 (45%), Positives = 270/415 (65%), Gaps = 7/415 (1%)
Query: 23 SQAPVT---YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
+ AP T +G+T ++ + P +L +L LK N E+ E R +VL L
Sbjct: 2 AAAPSTTRQWGVTPPISTTLPTAQELSANDDLIAELKLQNNFESPAETERRKQVLQLLQR 61
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF 139
+ E++K VS K + E GGKI+T+GSYRLGV+ G+DID L + P+HV D+F
Sbjct: 62 VTIEFVKVVSRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVLGPKHVVIDDFF 121
Query: 140 SSF---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDD 196
+ F E + V + V +AFVP+IK+ GI ID++FARL + IP ++DL+++
Sbjct: 122 AEFPPLLESMAPQGAVEKITPVPDAFVPLIKLELSGISIDLIFARLIVPSIPLNLDLKNN 181
Query: 197 MLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
L+ LD+K VRSLNG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV
Sbjct: 182 DYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 241
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA 316
+WAMLVAR+CQLYP A S +V KFF + ++W WPQPVLLK ++ L VW+P++
Sbjct: 242 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHG 301
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DR+HLMPIITPAYP +T N+S+ST+ ++ E ++G I + I+ + W+ LF+ +F
Sbjct: 302 DRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIWAKQATWNDLFKKHSF 361
Query: 377 FTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
FT Y++YL + ASS + E + W GL+ESKVRHL+G L+R P I +AH P+ +
Sbjct: 362 FTNDYKYYLGVTASSRTKEAESVWSGLVESKVRHLVGALDRKPTIAVAHPFPKGF 416
>gi|68482965|ref|XP_714613.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
gi|62900711|sp|Q9UW26.1|PAPA_CANAL RecName: Full=Poly(A) polymerase PAPa; AltName: Full=Polynucleotide
adenylyltransferase a
gi|5771506|gb|AAD51407.1| PAPa [Candida albicans]
gi|46436196|gb|EAK95563.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
Length = 555
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/548 (39%), Positives = 319/548 (58%), Gaps = 29/548 (5%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
YG+T ++++ + + L + LK E++ R+EVL+ L ++ +E++ +
Sbjct: 5 AYGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEFVYK 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VSI KNI +A VGGKI+TFGSYRLGV+ G+DID L V P+HV R D+F F+E LK
Sbjct: 65 VSIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRNDFFEVFYELLK 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ F GI ID++FARL + +P D+ L D LLKN+D+K +
Sbjct: 125 GRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDL 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL+LVP F+ ALR IK+WA++ +Y N+ G+ GGV+WAMLVARICQ
Sbjct: 185 RALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ +V KFF ++SQW WPQPVLLK+ ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ EF++G + DI GK W L E +FF +Y+ YL ++
Sbjct: 305 AYPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLCIV 364
Query: 388 ASSVSA-EDQLEWCGLIESKVRHLIGNLERNPHINLAHV------------NPECYTDTT 434
A++ S + L++ G++ESK+R L+ LE I LAH N E +
Sbjct: 365 AATRSTYAEHLKYSGMVESKLRLLVQKLELVEGIELAHPYVKSFENGYYCDNAEEAHEIM 424
Query: 435 GVIANGSGSPEIT----AEGKEEGGENTSPPVSGVASMWFIGLDF---IAANVILNLTYD 487
+ G + AE + EN V + FIGL L++ Y
Sbjct: 425 NLYGTSKGDDRVKGVLHAENNDNNKENVENKVELHMTKLFIGLKLDLSKEGEKKLDIQYP 484
Query: 488 IQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSE--YLPAHM--LKKDKKTKSGDQN 542
F N WQ S + I++++VK LS+ Y+ +K K+ ++ +N
Sbjct: 485 CAEFFNICKGWQDFDS----EKHFIQIKNVKLYDLSDDVYVDGETRPIKIAKRKRAVSKN 540
Query: 543 TSAKKRKS 550
KK KS
Sbjct: 541 EGKKKPKS 548
>gi|4062995|dbj|BAA36217.1| poly(A) polymerase isozyme [Candida albicans]
Length = 555
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/548 (39%), Positives = 319/548 (58%), Gaps = 29/548 (5%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
YG+T ++++ + + L + LK E++ R+EVL+ L ++ +E++ +
Sbjct: 5 AYGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEFVYK 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VSI KNI +A VGGKI+TFGSYRLGV+ G+DID L V P+HV R D+F F+E LK
Sbjct: 65 VSIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRNDFFEVFYELLK 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ F GI ID++FARL + +P D+ L D LLKN+D+K +
Sbjct: 125 GRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDL 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL+LVP F+ ALR IK+WA++ +Y N+ G+ GGV+WAMLVARICQ
Sbjct: 185 RALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ +V KFF ++SQW WPQPVLLK+ ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ EF++G + DI GK W L E +FF +Y+ YL ++
Sbjct: 305 AYPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLCIV 364
Query: 388 ASSVSA-EDQLEWCGLIESKVRHLIGNLERNPHINLAHV------------NPECYTDTT 434
A++ S + L++ G++ESK+R L+ LE I LAH N E +
Sbjct: 365 AATRSTYAEHLKYSGMVESKLRLLVQKLELVEGIELAHPYVKSFENGYYCDNAEEAHEIM 424
Query: 435 GVIANGSGSPEIT----AEGKEEGGENTSPPVSGVASMWFIGLDF---IAANVILNLTYD 487
+ G + AE ++ EN V + FIGL L++ Y
Sbjct: 425 NLYGTSKGDDRVKGVLHAENNDKNKENVENKVELHMTKLFIGLKLDLSKEGEKKLDIQYP 484
Query: 488 IQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSE--YLPAHM--LKKDKKTKSGDQN 542
F N WQ S + I +++VK LS+ Y+ +K K+ ++ +N
Sbjct: 485 CAEFFNICKGWQDFDS----EKHFIRIKNVKLYDLSDDVYVDGETRPIKIAKRKRAVSKN 540
Query: 543 TSAKKRKS 550
KK KS
Sbjct: 541 EGKKKPKS 548
>gi|50292873|ref|XP_448869.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528182|emb|CAG61839.1| unnamed protein product [Candida glabrata]
Length = 569
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/424 (44%), Positives = 278/424 (65%), Gaps = 9/424 (2%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++++ P + + EL + LK N E+++E ++R++VL L L ++++ EV
Sbjct: 7 YGITGPVSIAGPTAAENKLNDELIQELKKENSFESEQETANRVKVLKTLQELTEKFVYEV 66
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S KN+ +A GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 67 SKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDALLRE 126
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+E+ ++ V +AFVP+IK+ F GI ID++ A+L + ++ + L D LL+NLD+K +R
Sbjct: 127 REELDEIAPVPDAFVPIIKLKFSGISIDLICAKLDIAQVKPSLTLDDKALLRNLDEKDLR 186
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
+LNG RVTDEIL LVP FR+ALR IK+WA++ IY+NV G+ GGV+WAMLVARICQL
Sbjct: 187 ALNGTRVTDEILELVPKPSVFRIALRAIKIWAQRRAIYANVFGFPGGVAWAMLVARICQL 246
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ ++ +FF + S+WKWPQPV+LK ++ L VW+P++ DR H MP+ITPA
Sbjct: 247 YPNACSAVILNRFFKILSEWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPA 306
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N++ ST+ ++ +E +G ++ DI+ K W LF +FF +Y++YL + A
Sbjct: 307 YPSMCATHNITESTKAVILKELNRGIQVTNDIFAYKKTWADLFTKHDFFFQYKYYLTITA 366
Query: 389 SSVS-AEDQLEWCGLIESKVRHLIGNLERNPHINLAH--VNP----ECYTD--TTGVIAN 439
++ E+ L+W GL+ESK+R L LE P I LAH P CYTD I N
Sbjct: 367 ATRGDDEEHLKWSGLVESKLRLLTLKLETIPGIKLAHPFFKPFEAAYCYTDDQDAKTILN 426
Query: 440 GSGS 443
GS
Sbjct: 427 NHGS 430
>gi|63101121|gb|AAY33178.1| PAPa [Candida parapsilosis]
gi|354544642|emb|CCE41367.1| hypothetical protein CPAR2_303560 [Candida parapsilosis]
Length = 552
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/437 (43%), Positives = 284/437 (64%), Gaps = 1/437 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+YG+T ++LS P + + L + LK E++ R+EVL+ L L ++++ E
Sbjct: 5 SYGVTPPISLSDPTSKEKELNDLLIKELKLRGSYESESATLKRVEVLTTLQKLTEQFVYE 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS+ +N+ +A+ GGKI+TFGSY+LGV+ +DIDAL V PRHV R D+F+ F + L+
Sbjct: 65 VSLQRNMSQGMAKDAGGKIFTFGSYKLGVYGPSSDIDALVVVPRHVTRDDFFTVFEKILR 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V+EAFVP+IK+ F GI ID+LFA+L + +P D+ L D LLKN+D+K +
Sbjct: 125 GRQELEEINCVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDM 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEILRLVP F+ ALR +K+WA++ IY+NV G+ GGV+WAMLVARICQ
Sbjct: 185 RALNGTRVTDEILRLVPKSTVFKNALRFVKMWAQQRAIYANVYGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ KFF ++SQW WPQPVLLK+ ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVSAVILEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ I+ EF +G I + +G+ W L E +FF KY+ YL ++
Sbjct: 305 AYPSMCATHNITSSTQKIIMSEFDRGVEIMNGVVSGQKSWSDLLERHDFFHKYKFYLCVV 364
Query: 388 ASSVS-AEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEI 446
A++ S E+ ++ G++ESK+R L+ LE+ + LAH + + + ++ +
Sbjct: 365 AATKSNTEEHSKYSGMVESKLRLLVQKLEQVEGVELAHPYVKSFENGYQCKSDEEVHSIV 424
Query: 447 TAEGKEEGGENTSPPVS 463
A G G E + VS
Sbjct: 425 NAYGTSRGDEIATQLVS 441
>gi|326484929|gb|EGE08939.1| Poly(A) polymerase PAPalpha [Trichophyton equinum CBS 127.97]
Length = 601
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/406 (45%), Positives = 263/406 (64%), Gaps = 4/406 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T L+ + P +L L LK N E E R + L L + E+IK V
Sbjct: 9 WGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRVTIEFIKVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + + GGKI+T+GSYRLGV+ G+DID L VAP+HV R D+F+ F EK
Sbjct: 69 SKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMREDFFAHFPTVLEK 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
D + + V +AFVP+IK+ GI ID++FARL + +P ++DL++ LL+ LD++
Sbjct: 129 HAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDER 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + +QW WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+ ++ E ++G + + I+ G+ W LF +FF+ Y++YL
Sbjct: 309 TPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ ++S S E Q W GL+ESK+RHL+G L+R I +AH P+ +
Sbjct: 369 SINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSSIEIAHPFPKGF 414
>gi|326471772|gb|EGD95781.1| Poly(A) polymerase PAPalpha [Trichophyton tonsurans CBS 112818]
Length = 601
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/406 (45%), Positives = 263/406 (64%), Gaps = 4/406 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T L+ + P +L L LK N E E R + L L + E+IK V
Sbjct: 9 WGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRVTIEFIKVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + + GGKI+T+GSYRLGV+ G+DID L VAP+HV R D+F+ F EK
Sbjct: 69 SKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMREDFFAHFPTVLEK 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
D + + V +AFVP+IK+ GI ID++FARL + +P ++DL++ LL+ LD++
Sbjct: 129 HAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDER 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + +QW WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+ ++ E ++G + + I+ G+ W LF +FF+ Y++YL
Sbjct: 309 TPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ ++S S E Q W GL+ESK+RHL+G L+R I +AH P+ +
Sbjct: 369 SINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSSIEIAHPFPKGF 414
>gi|327293141|ref|XP_003231267.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
gi|326466383|gb|EGD91836.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
Length = 601
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/406 (45%), Positives = 263/406 (64%), Gaps = 4/406 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T L+ + P +L L LK N E E R + L L + E+IK V
Sbjct: 9 WGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRVTIEFIKVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + + GGKI+T+GSYRLGV+ G+DID L VAP+HV R D+F+ F EK
Sbjct: 69 SKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMREDFFAHFPAVLEK 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
D + + V +AFVP+IK+ GI ID++FARL + +P ++DL++ LL+ LD++
Sbjct: 129 HAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDER 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + +QW WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+ ++ E ++G + + I+ G+ W LF +FF+ Y++YL
Sbjct: 309 TPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ ++S S E Q W GL+ESK+RHL+G L+R I +AH P+ +
Sbjct: 369 SINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSSIEIAHPFPKGF 414
>gi|322709453|gb|EFZ01029.1| Poly(A) polymerase [Metarhizium anisopliae ARSEF 23]
Length = 572
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/522 (40%), Positives = 303/522 (58%), Gaps = 33/522 (6%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T +++ P + + + + L E L+ E+ + R +VL L + E++K
Sbjct: 6 VFGVTPPISVGLPTEAEKRASDALIEELRRQKTFESPSDTQKRYKVLESLQAICDEFVKR 65
Query: 88 VSIAKNIPPTVAEK-VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---F 143
V+ K V K GK++T+GS+RLGV G+DID L VAP++V R DYF F
Sbjct: 66 VAREKEPKNDVLIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTREDYFKYFPDLL 125
Query: 144 EKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI-PDDMDLRDDMLLKNL 202
E + +TDL AV +AFVP+IK + GI ID++F+R+ K++ PD DL+D LL+ L
Sbjct: 126 EAMAPKGAITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLQDSGLLRGL 185
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D+ +RSLNG RVTDEIL LVP F+LALR IKLWA++ +Y N++G+ GGV+WAMLV
Sbjct: 186 DEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLV 245
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR+CQLYP AA S +V KFFLV SQW+WPQPVLLK ++ L VW+P++ D +HLM
Sbjct: 246 ARVCQLYPKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLM 305
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YR 381
P+ITPAYP +TFN+S S+ I+ E ++G ISE I GK W LF FFT Y+
Sbjct: 306 PVITPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKRPWSDLFVKHTFFTSDYK 365
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHV-------NPECYTDT- 433
+Y+ +I++S S E W G +ESKVR L+ LE++P I LAH +C D+
Sbjct: 366 YYISVISASKSKEAHNVWSGYVESKVRMLVQKLEQHPSIALAHAFNKGYERRHQCKDDSE 425
Query: 434 TGVIANGS------GSPEITAEGK-----------EEGGENTSPPVSGVASMWFIGLDFI 476
+ +GS G + A K E G + P + +IGL+
Sbjct: 426 IAQVQDGSLDFLIKGDEDCQATAKLESEEPRHDATENGDTESKRPTKVFTTTHYIGLELD 485
Query: 477 AANVILNLTYDIQHF-TNAVHWQATQSKMMKDGMKIEVRHVK 517
A L+L+Y + F WQ Q + +K + I V+HV+
Sbjct: 486 EAAKSLDLSYQVDEFKVLCTQWQKYQEE-LKPLVSIGVQHVR 526
>gi|190347092|gb|EDK39304.2| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/544 (39%), Positives = 314/544 (57%), Gaps = 30/544 (5%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++ + P + L + L+ E + R+EVL+ L + +E++
Sbjct: 5 TYGVTPPISTAEPTSKEKSLNDSLIKELRKRGSFENEAATKKRVEVLNTLQKITEEFVYR 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS+ KN+ +A GGKI+T+GSYRLGV+ G+DID L V P+HV+R D+F+ F L+
Sbjct: 65 VSLNKNMSEGMARDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVNRTDFFTVFESLLR 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ +V +AFVP+IK+ F GI ID++ A+L + ++P D+ L D LL+NLD+K +
Sbjct: 125 ERPELEEIASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEKDL 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL LVP F+ ALR IK+WA++ IY+N+ G+ GGV+WAML ARICQ
Sbjct: 185 RSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ +V KFF ++SQW WPQPVLLK+ ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRSHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ I+ EFK+G I DI GK W LF FF +Y+ YL ++
Sbjct: 305 AYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEFFFRYKFYLCVV 364
Query: 388 ASSV-SAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY--------TDTTGVIA 438
AS+ SAE+ L+W G++ESK+R L+ LE I +AH + + D I
Sbjct: 365 ASTKGSAEEHLKWSGMVESKLRILVQKLELTEGITIAHPYVKTFEDGYVCKTADEASTII 424
Query: 439 NGSGSPEITAEGKEEGGENTSPP--------VSGVASMWFIGLDF-IAANVILNLTYDIQ 489
+ G+ + E EG P ++ + +IGLD I L++
Sbjct: 425 SSYGT--LKGEKATEGARKIENPKETYTNDEIALHLTKLYIGLDIDIKGAKSLDIQVPCS 482
Query: 490 HFTNAVHWQATQSKMMKDGMKIEVRHVKKKQL-------SEYLPAHMLKKDKKTKSGDQN 542
F N T + +D I++++VK L E P + K+ + +GD N
Sbjct: 483 EFFNLCKGWPTYN---EDMHAIQIKNVKLHDLPNDVYVEGEERPMKIPKRKRLDSNGDTN 539
Query: 543 TSAK 546
K
Sbjct: 540 KRLK 543
>gi|444321773|ref|XP_004181542.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
gi|387514587|emb|CCH62023.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
Length = 574
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/397 (46%), Positives = 262/397 (65%), Gaps = 1/397 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ P + + EL + LK N ET+ E R+ +L L L +E++ V
Sbjct: 7 YGITGPVSTVGPTAAENKLNDELIQELKKENSFETELETEKRVNILKTLQKLTEEFVYRV 66
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S KN+ +A GGK++TFGSYRLGVH G+DID L V P+HV R D+F+ F E L+
Sbjct: 67 SKKKNMSDGMARDSGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSRDDFFTIFAELLRG 126
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+E+ ++ V +AFVP+IK F GI ID+L ARL L +IP + L D LL+NLD+K +R
Sbjct: 127 REEIEEIAPVPDAFVPIIKTQFSGISIDLLCARLDLAQIPLSLTLSDKNLLRNLDEKDLR 186
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
++NG RVTDEIL LVP FR+ALR +K+WA + IY+NV G+ GGV+WAMLVARICQL
Sbjct: 187 AINGTRVTDEILELVPKPNVFRIALRAVKIWAPRRAIYANVFGFPGGVAWAMLVARICQL 246
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ ++ +FF + +WKWPQPV+LK ++ L VW+P++ DR H MP+ITPA
Sbjct: 247 YPNACSAVILNRFFKILLEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPA 306
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N++ ST+ ++ +EF++G ++ DI+ K W LF+ FF KY+ YL ++A
Sbjct: 307 YPSMCATHNITDSTKKVILQEFERGVQVTNDIFTNKKTWADLFKKHEFFHKYKFYLTVVA 366
Query: 389 SSV-SAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
S+ S E L+W G +ESK+R L+ LE I LAH
Sbjct: 367 STRGSTEQHLKWSGFVESKLRLLVLKLETLAGIKLAH 403
>gi|358370159|dbj|GAA86771.1| poly(A) polymerase Pap [Aspergillus kawachii IFO 4308]
Length = 598
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/406 (45%), Positives = 264/406 (65%), Gaps = 4/406 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ P +L +L LK N E+ E R +VL + + E++K V
Sbjct: 9 WGVTPPISTVLPTPDELAANDDLITELKVQNNFESPAETERRKQVLQLIQRVTVEFVKTV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + E GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS F EK
Sbjct: 69 SRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVIIDDFFSDFPPILEK 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ + + V +A+VP+IK+ GI ID++FARL + IP ++DL+++ L+ LD++
Sbjct: 129 MAAPGAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPMNLDLKNNDYLRGLDER 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
VRSLNG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + ++W WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+ ++ E ++G I + I+ + W+ LF FFTK Y++YL
Sbjct: 309 TPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ ASS + E + W GL+ESK+RHL+G L+R I +AH P+ +
Sbjct: 369 SITASSRTKEAESVWSGLVESKIRHLVGALDRKATIAIAHPFPKGF 414
>gi|350638725|gb|EHA27081.1| hypothetical protein ASPNIDRAFT_46294 [Aspergillus niger ATCC 1015]
Length = 579
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/406 (45%), Positives = 264/406 (65%), Gaps = 4/406 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ P +L +L LK N E+ E R +VL + + E++K V
Sbjct: 9 WGVTPPISTVLPTPDELAANDDLITELKVQNNFESPAETERRKQVLQLIQRVTVEFVKTV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + E GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS F EK
Sbjct: 69 SRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVIIDDFFSDFPPILEK 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ + + V +A+VP+IK+ GI ID++FARL + IP ++DL+++ L+ LD++
Sbjct: 129 MAAPGAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPMNLDLKNNDYLRGLDER 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
VRSLNG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + ++W WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+ ++ E ++G I + I+ + W+ LF FFTK Y++YL
Sbjct: 309 TPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ ASS + E + W GL+ESK+RHL+G L+R I +AH P+ +
Sbjct: 369 SITASSRTKEAESVWSGLVESKIRHLVGALDRKATIAIAHPFPKGF 414
>gi|346322043|gb|EGX91642.1| Poly(A) polymerase [Cordyceps militaris CM01]
Length = 608
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/410 (46%), Positives = 269/410 (65%), Gaps = 6/410 (1%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
YG+T +++S P +++ + + L E L+ E+ + +R VL L + E++K+
Sbjct: 6 VYGVTPPISVSLPTEIEKRVSESLIEELRRQKTFESPSDTQNRFTVLESLQIITDEFVKK 65
Query: 88 VSIAKNIPPTVAEK-VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---F 143
V+ K + K GK++T+GS+RLGV G+DID L VAP++V R DYF F
Sbjct: 66 VAREKEPKNDILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTREDYFKYFPDLL 125
Query: 144 EKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI-PDDMDLRDDMLLKNL 202
++ D +TD+ AV +AFVP+IK + GI ID++F+R+ K++ PD DLRD L+ L
Sbjct: 126 TEMAPKDSITDITAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFTDLRDSGFLRGL 185
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D+ +RSLNG RVTDEIL LVP FRLALR IKLWA++ +Y N++G+ GGV+WAMLV
Sbjct: 186 DEAELRSLNGTRVTDEILSLVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLV 245
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR+CQLYP AA S +V KFFLV SQW+WPQPVLLK +N L VW+P+V D +HLM
Sbjct: 246 ARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLM 305
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YR 381
PIITPAYP +TFN++ S+ +I++ E ++G ISE + GK W LF FFT Y+
Sbjct: 306 PIITPAYPSMCATFNITRSSMSIIKRELQRGLEISEQVMVGKQPWSDLFVKHTFFTTGYK 365
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYT 431
+Y+ ++++S + E W G IESKVR L+ LE++PHI LAH + Y+
Sbjct: 366 YYISVVSASKAKEPHKLWAGYIESKVRMLVQKLEQHPHIALAHPYVKGYS 415
>gi|410079098|ref|XP_003957130.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
gi|372463715|emb|CCF57995.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
Length = 567
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/398 (46%), Positives = 267/398 (67%), Gaps = 1/398 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
YG+T ++ + P + + L + LK N ET++E ++R+EVL L L + ++
Sbjct: 6 VYGITGPVSTAGPTAAENKLNDGLIQELKRNNSFETEKETANRVEVLKLLQELAQRFVFN 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A+ GGKI+TFGSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 66 VSKKKNMSDGMAKDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVSREDFFTEFDSLLR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVPVIK+ GI ID+L A+L + ++P+ + L D+ LL+N+D+K +
Sbjct: 126 ERSELDEIAPVPDAFVPVIKIKLRGISIDLLCAKLDIAQVPESLVLSDNNLLRNVDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA+ +Y+NV G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILELVPKPIVFRIALRAIKLWAQNRAVYANVFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF + S+WKWPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 246 LYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ EEF +G I+ DI++ K W LF FF KY+ YL +
Sbjct: 306 AYPSMCATHNITDSTKKVILEEFSRGIQITNDIFSSKKSWSDLFNKHEFFYKYKFYLTIT 365
Query: 388 ASS-VSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
AS+ S E+ L+W GL+ESKVR L+ LE I +AH
Sbjct: 366 ASTRASDEEHLKWSGLVESKVRLLVLKLEALSGIKIAH 403
>gi|255930343|ref|XP_002556731.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581344|emb|CAP79117.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 590
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/406 (45%), Positives = 266/406 (65%), Gaps = 4/406 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ P + +L +L LK N E E R +VL L + E+++ V
Sbjct: 9 WGVTPPISTVLPTKDELSANDDLIAELKAQNNFELPTETERRKQVLQLLQRVTVEFVQVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + P E GGKI+T+GSYRLGV+ G+DID L V P+HV D+F+ F E+
Sbjct: 69 SRKKGLSPAAVEASGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLIDDFFAEFPPVLER 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ + + + V +AFVP+IK+ GI ID++FARL + IP ++DL+++ L+ LD++
Sbjct: 129 MASEGAIEKMTPVPDAFVPIIKLELCGISIDLIFARLVIPSIPMNLDLKNNDYLRGLDER 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
VRSLNG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + ++W WPQPVLLK+ ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T N+S+ST+ ++ E ++G + + I+ + W LF FFT Y++YL
Sbjct: 309 TPAYPSMCATHNISMSTKAVILRELQRGGDMVDKIFMKQLSWHDLFARHTFFTHDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ ASS + E + W GL+ESK+RHL+G L+R P I +AH P+ +
Sbjct: 369 SITASSKTKEAESVWSGLVESKLRHLVGALDRKPIIAVAHPFPKGF 414
>gi|261191352|ref|XP_002622084.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239589850|gb|EEQ72493.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239612743|gb|EEQ89730.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis ER-3]
Length = 599
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/457 (42%), Positives = 284/457 (62%), Gaps = 12/457 (2%)
Query: 23 SQAPV-TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
+ APV +G+T ++ + P ++ +L LK N E E R + L + +
Sbjct: 2 AAAPVRQWGVTPPVSNALPTPAEIAANEDLTAELKRQNNFEAPAETERRKQTLQLIQRVT 61
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
E++K VS K + + GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS
Sbjct: 62 VEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSD 121
Query: 142 F---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F E + + + L V +AFVP+IK+ GI ID+++ARL + +P ++DL++ L
Sbjct: 122 FPPVLENMAPLGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDL 181
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L+ LD+K +R +NG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+W
Sbjct: 182 LRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR+CQLYP A S +V KFF + +QWKWPQPVLLK + L VW+P++ D+
Sbjct: 242 AMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDK 301
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITPAYP +T NVS+ST+ ++ E K+G I++ I+ G+ W+ LF FF+
Sbjct: 302 YHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFFS 361
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY------T 431
+ Y++YL + ++S S + Q W GL+ESK+RHL+G L+R I +AH P+ +
Sbjct: 362 QDYKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEIAHPFPKGFERIHICK 421
Query: 432 DTTGVIANGSGSPEITAEG-KEEGGENTSPPVSGVAS 467
D + GS + A+G K E + T+ P AS
Sbjct: 422 DQKEIAEVMGGSTKYQAKGTKTETTDETNDPQHTAAS 458
>gi|425765475|gb|EKV04155.1| Poly(A) polymerase Pap [Penicillium digitatum Pd1]
gi|425778347|gb|EKV16478.1| Poly(A) polymerase Pap [Penicillium digitatum PHI26]
Length = 597
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/578 (37%), Positives = 326/578 (56%), Gaps = 57/578 (9%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ P + +L +L LK N E E R +VL L + E+++ V
Sbjct: 9 WGVTPPISTVLPTKDELSANDDLIAELKAQNNFELPTETERRKQVLQLLQRVTVEFVQVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + P E GGKI+T+GSYRLGV+ G+DID L V P+HV D+F+ F ++
Sbjct: 69 SRKKGLSPAAVEASGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLIDDFFAEFPPILQR 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ + + + V +AFVP+IK+ GI ID++FARL + IP ++DL+++ L+ LD++
Sbjct: 129 MASEGAIEKMTPVPDAFVPIIKLELCGISIDLIFARLVIPAIPMNLDLKNNDYLRGLDER 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
VRSLNG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + ++W WPQPVLLK+ ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T N+S+ST+ ++ E ++G I + I+ + W LF FFT Y++YL
Sbjct: 309 TPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFMKQLSWQDLFARHTFFTHDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY-------------- 430
+ ASS + E + W GL+ESK+RHL+G L+R P + +AH P+ +
Sbjct: 369 SITASSKTKEAESVWSGLVESKLRHLVGALDRKPIVAVAHPFPKGFERIHIIKNEQEMEA 428
Query: 431 -----------------TDTT------GVIANGSGSPEI--TAEGKEEGG-ENTSPPVSG 464
TD T I N + E+ AEGK EG +N V
Sbjct: 429 VKNGSTQHQAKGTKTAMTDETKDHAHQAAIQNTLENAEVPAPAEGKVEGTVDNDGQTV-- 486
Query: 465 VASMWFIGLDFI----AANVILNLTYDIQHF-TNAVHWQATQSKMMKDGMKIEVRHVKKK 519
+ ++IGL+ + L+++ D Q F + W Q ++ M++ V HV+
Sbjct: 487 YTTTYYIGLELKPLEPGQSRSLDISTDSQIFKSTCTSWPGYQEEV----MELAVTHVRSF 542
Query: 520 QLSE--YLPAHMLKKDKKTKSGDQNTSAKKRKSDQALD 555
L + + P K K ++ +A +++S LD
Sbjct: 543 DLPDDVFQPGETRASRPKKKVTKRSEAAGQKRSIGELD 580
>gi|327357099|gb|EGE85956.1| Poly(A) polymerase PAPa [Ajellomyces dermatitidis ATCC 18188]
Length = 599
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/457 (42%), Positives = 284/457 (62%), Gaps = 12/457 (2%)
Query: 23 SQAPV-TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
+ APV +G+T ++ + P ++ +L LK N E E R + L + +
Sbjct: 2 AAAPVRQWGVTPPVSNALPTPAEIAANEDLTAELKRQNNFEAPAETERRKQTLQLIQRVT 61
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
E++K VS K + + GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS
Sbjct: 62 VEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSD 121
Query: 142 F---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F E + + + L V +AFVP+IK+ GI ID+++ARL + +P ++DL++ L
Sbjct: 122 FPPVLENMAPLGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDL 181
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L+ LD+K +R +NG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+W
Sbjct: 182 LRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR+CQLYP A S +V KFF + +QWKWPQPVLLK + L VW+P++ D+
Sbjct: 242 AMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDK 301
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITPAYP +T NVS+ST+ ++ E K+G I++ I+ G+ W+ LF FF+
Sbjct: 302 YHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFFS 361
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY------T 431
+ Y++YL + ++S S + Q W GL+ESK+RHL+G L+R I +AH P+ +
Sbjct: 362 QDYKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEIAHPFPKGFERIHICK 421
Query: 432 DTTGVIANGSGSPEITAEG-KEEGGENTSPPVSGVAS 467
D + GS + A+G K E + T+ P AS
Sbjct: 422 DQKEIAEVMGGSTKYQAKGTKTETTDETNDPQHTAAS 458
>gi|146416103|ref|XP_001484021.1| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 318/543 (58%), Gaps = 28/543 (5%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++ + P + L + L+ E + R+EVL+ L + +E++
Sbjct: 5 TYGVTPPISTAEPTSKEKSLNDSLIKELRKRGSFENEAATKKRVEVLNTLQKITEEFVYR 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS+ KN+ +A GGKI+T+GSYRLGV+ G+DID L V P+HV+R D+F+ F L+
Sbjct: 65 VSLNKNMSEGMARDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVNRTDFFTVFESLLR 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ +V +AFVP+IK+ F GI ID++ A+L + ++P D+ L D LL+NLD+K +
Sbjct: 125 ERPELEEIASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEKDL 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL LVP F+ ALR IK+WA++ IY+N+ G+ GGV+WAML ARICQ
Sbjct: 185 RSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ +V KFF ++SQW WPQPVLLK+ ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRLHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ I+ EFK+G I DI GK W LF FF +Y+ YL ++
Sbjct: 305 AYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEFFFRYKFYLCVV 364
Query: 388 ASSV-SAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTD----------TTGV 436
AS+ SAE+ L+W G++ESK+R L+ LE I +AH + + D T +
Sbjct: 365 ASTKGSAEEHLKWSGMVESKLRILVQKLELTEGITIAHPYVKTFEDGYVCKTADEALTII 424
Query: 437 IANGSGSPEITAEGKEEGGEN-----TSPPVSGVASMWFIGLDF-IAANVILNLTYDIQH 490
+ G+ E EG + EN T+ ++ + +IGLD I L++
Sbjct: 425 SSYGTLKGEKATEGARK-IENPKETYTNDEIALHLTKLYIGLDIDIKGAKSLDIQVPCSE 483
Query: 491 FTNAVHWQATQSKMMKDGMKIEVRHVKKKQL-------SEYLPAHMLKKDKKTKSGDQNT 543
F N T + +D I++++VK L E P + K+ + +GD N
Sbjct: 484 FFNLCKGWPTYN---EDMHAIQIKNVKLHDLPNDVYVEGEERPMKIPKRKRLDSNGDTNK 540
Query: 544 SAK 546
K
Sbjct: 541 RLK 543
>gi|239835851|gb|ACS29263.1| pap1 [Clavispora lusitaniae]
Length = 547
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/539 (40%), Positives = 311/539 (57%), Gaps = 37/539 (6%)
Query: 34 ALNLSPPNQL------DLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
AL ++PP + ++ EL + LK E++ R+EVL+ + L +E++
Sbjct: 5 ALGVTPPISVANATPKEISLNDELIKELKIRGSFESENATKRRVEVLNIMQKLTEEFVYI 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A+ GGKI+TFGSYRLGV+ +G+DID L V P+HV+R D+F F + LK
Sbjct: 65 VSKRKNMSDGMAKDAGGKIFTFGSYRLGVYGQGSDIDTLVVVPKHVNRQDFFDVFVDLLK 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ +V +AFVP+IKM F GI ID++FA+L + +P D+ L + LLKNLD+K +
Sbjct: 125 KRSELEEITSVPDAFVPIIKMEFGGISIDLIFAKLDIPRVPRDLTLDNKNLLKNLDEKDL 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL LVP F+ ALR IK+WA++ IY+NV G+ GGV+WAMLVARICQ
Sbjct: 185 RSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPN ++ +V KFF ++SQW WPQPVLLK+ ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNTVSAVIVEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ EF +G + I+ G W LFE FF +Y+ YL ++
Sbjct: 305 AYPSMCATHNITKSTKDVIMSEFNRGVNVMAQIHAGTASWGLLFERHRFFFQYKFYLCIV 364
Query: 388 ASS-VSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH--VNP-------------ECYT 431
A++ S+ + L+W G+IESKVR L+ LE I LAH V P +
Sbjct: 365 AATKSSSAEHLKWSGMIESKVRLLVQKLELTEGITLAHPYVKPFENSYVGTSAEHVQQII 424
Query: 432 DTTGVIANGSGSPEITA-EGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQH 490
D G + + + TA E GE V + +IGLD + L++ Y
Sbjct: 425 DGYGTLGGEAATQTATALEKASNEGEEQEHEVH--LTKLYIGLDIAEGHKKLDIQYPCSE 482
Query: 491 FTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRK 549
F + AT K+ V +K +L + L D + + T A KRK
Sbjct: 483 FFSICKGWATFDD------KVHVVQIKNVKLYD------LPNDVYVEGETRPTKATKRK 529
>gi|225561454|gb|EEH09734.1| poly(A) polymerase Pap [Ajellomyces capsulatus G186AR]
Length = 600
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/578 (36%), Positives = 321/578 (55%), Gaps = 46/578 (7%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ + P ++ +L LK N E E R + L + + E++K V
Sbjct: 9 WGVTPPVSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRVTVEFVKVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + + GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS F E
Sbjct: 69 SRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPPILEN 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ + L +V +A+VP+IK+ GI ID+++ARL + +P ++DLR+ LL+ LD+K
Sbjct: 129 MAPKGAIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPPNLDLRNKDLLRGLDEK 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + +QWKWPQPVLLK + L VW+P++ D+YHLMPII
Sbjct: 249 CQLYPQATGSAVVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+T++ E K+G I++ I+ G+ W+ LF FF++ Y++YL
Sbjct: 309 TPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY------TDTTGVIA 438
+ ++S S + Q W GL+ESK+RHL+G L+R I +AH P+ + D ++
Sbjct: 369 NITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEIAHPFPKGFERIHICKDEKEIVE 428
Query: 439 NGSGSPEITAEG-----------------KEEGGENTSPP----------VSGVASMWFI 471
GS + A+G + GGE P + + ++I
Sbjct: 429 VMGGSMKYQAKGTKTETTDESNDPQHTAASQNGGEAIKMPETDHPNGDKGCTLYTTTYYI 488
Query: 472 GLDF----IAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSE--YL 525
GL+ A+ L+++ D F + A + D + + HV+ L E +
Sbjct: 489 GLELKPLVPGASRSLDISADTHIFKSTCTSWAQYQPGIND---LNITHVRNYDLPEDVFQ 545
Query: 526 PAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRP 563
P + K K ++ ++++ ALD P
Sbjct: 546 PGEVRPSRPKKKVVKKSEPTAQKRNIHALDNEAPSENP 583
>gi|225677646|gb|EEH15930.1| Poly(A) polymerase PAPa [Paracoccidioides brasiliensis Pb03]
gi|226295198|gb|EEH50618.1| Poly(A) polymerase pla1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/572 (37%), Positives = 318/572 (55%), Gaps = 50/572 (8%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ + P ++ +L LK N E+ E R + L + + E++K V
Sbjct: 9 WGVTPPISTALPTPSEIAANDDLTTELKQQNNFESPSETERRKQTLHLIQRVTVEFVKVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + + GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS F E+
Sbjct: 69 SRRKGLSQAAIDIAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPPLLEQ 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ + L V +AFVP+IK+ GI ID+++ARL + +P ++DL++ LL+ LD+K
Sbjct: 129 MAPKGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEK 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + +QW WPQPVLLK + L VW+P++ DRYHLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNQWNWPQPVLLKPIEEGPLQMKVWNPKIYHGDRYHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+ ++ E K+G I + I+ G+ W+ LF FF++ Y++YL
Sbjct: 309 TPAYPSMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQLTWNDLFTRHTFFSQDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYTDTTGVI 437
+ +SS E Q W GL+ESK+RHL+G L+R I +AH P+ C T+ +
Sbjct: 369 SITSSSRGKEAQSVWSGLVESKLRHLVGALDRKSSIEVAHPFPKGFERVHVCKTEKE-IA 427
Query: 438 ANGSGSPEITAEGK-----------------EEGGENTSPPVSG----------VASMWF 470
SGS + A+G + GGE P + ++ ++
Sbjct: 428 EVMSGSTQYQAKGTKTKTTDQTNDPQHAAAVQNGGETVQMPQADEPNGENSCTLYSTTYY 487
Query: 471 IGLDF----IAANVILNLTYDIQHF-TNAVHWQATQSKMMKDGMKIEVRHVKKKQLSE-- 523
IGL+ A L+++ D Q F + W Q + + + HV+ L E
Sbjct: 488 IGLELKPLAPGAARSLDISTDTQIFKSTCTSWPQYQPGI----NDLHITHVRNYDLPEDV 543
Query: 524 YLPAHMLKKDKKTKSGDQNTSAKKRKSDQALD 555
+ + K K+ + +++S ALD
Sbjct: 544 FQSGEVRPSRPKKKTLKKTEPTAQKRSIHALD 575
>gi|344301689|gb|EGW31994.1| Poly(A) polymerase PAPalpha [Spathaspora passalidarum NRRL Y-27907]
Length = 556
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/460 (42%), Positives = 288/460 (62%), Gaps = 14/460 (3%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
YG+T ++ + P + L + LK E + R EVL+ +V+E++
Sbjct: 5 AYGVTDPISTANPTPRENSLNDSLIQELKNRGSFENESATKKRAEVLALFQKMVQEFVYT 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS +KN+ +A+ GGK++TFGSYRLGV+ G+DID L V P+HV R D+F+ F + ++
Sbjct: 65 VSKSKNMSDGMAKDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTREDFFTVFEQIIR 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ +V +AFVP+IK+ FDGI ID++ ARL + +P DM L D LLKN+D++ +
Sbjct: 125 KRPELQEIASVPDAFVPIIKIEFDGISIDLILARLNVPRVPLDMTLDDKNLLKNIDERDL 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL+LVP F+ ALR IKLWA++ +Y NV G+ GGV+WAMLVARICQ
Sbjct: 185 RSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVFGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ +V KFF ++++W WPQPVLLK ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRLHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ E +G + I GK+ W L E +FF KY+ YL ++
Sbjct: 305 AYPSMCATHNITSSTQKVIMSELARGAEVMNQINLGKSSWSALLERHDFFHKYKFYLCIV 364
Query: 388 ASSVSA-EDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANG------ 440
A++ S+ E+ L+W GL+ESK+RHL+ LE I LAH + ++D+ + N
Sbjct: 365 AATTSSDEEHLKWSGLVESKLRHLVLKLEVTDGIELAHPYVKDFSDSYILGENNHMDVIN 424
Query: 441 -----SGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF 475
SG ++ K E G+N + + + F+GL+
Sbjct: 425 SYGTLSGESFLSTLQKPESGDNEAKQIH--LTKLFVGLEL 462
>gi|452825557|gb|EME32553.1| poly(A) polymerase [Galdieria sulphuraria]
Length = 584
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 231/586 (39%), Positives = 322/586 (54%), Gaps = 98/586 (16%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + P LD + +REL E L N+ E ++E R +VL++L+ L+ EW++ VS
Sbjct: 16 GVTEPISTATPTPLDYRLSRELEEFLHNRNLYENNKEAQRREQVLAELHQLINEWVRRVS 75
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSSFFEK--- 145
++ I + + K++TFGSYRLGV+ ADID LC+ PR+V+R D F E
Sbjct: 76 RSQGIAEEIVSETEAKLFTFGSYRLGVNPPNADIDTLCIVPRYVERNRDVFGIPSESGSV 135
Query: 146 ----------LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRD 195
K+ ++ D+ V +A VPV+K F G+EID+L ARL ++P+ +D+ D
Sbjct: 136 PEEENVLVNIFKSHPKIEDVVPVFDAHVPVVKFKFAGVEIDLLCARLQFSKLPERLDILD 195
Query: 196 DMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGG 255
D +L+N+D + RS+NG RVTD ILRLVPN+E FR LR +K WAK GIYSNVLG+LGG
Sbjct: 196 DSILRNVDDETQRSVNGVRVTDAILRLVPNVETFRTTLRAVKFWAKNRGIYSNVLGFLGG 255
Query: 256 VSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK--KPDNVNLGFPVWDPRV 313
VSWA+LVARICQLYP+AAA+ ++ +FF V+SQWKWP PVLL P + GF VW+P V
Sbjct: 256 VSWAILVARICQLYPHAAANVILSRFFRVYSQWKWPNPVLLTSISPGKPSCGFKVWNPAV 315
Query: 314 NVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQG---------------KTIS- 357
ADR HLMP+ITPAYP NST NVS +T I+QEE +G KTIS
Sbjct: 316 FPADRKHLMPVITPAYPSMNSTHNVSRTTLRIIQEEIHRGLEITDKILCQSNSSRKTIST 375
Query: 358 EDIYNGKT------------------MWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEW 399
ED N +T W KLFE +FF+K+++YL + S +AE+Q +W
Sbjct: 376 EDTENDQTTQVEHSEETNLVKETEVMTWSKLFERTDFFSKFKNYLQINVISGTAENQRKW 435
Query: 400 CGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTS 459
G +ESK+R L LE H L + P YT
Sbjct: 436 HGFVESKLRVLTLKLEILSH-TLIYPYPVPYTR--------------------------- 467
Query: 460 PPVSGVASMWFIGLDFIAANV---------ILNLTYDIQHFTNAV-HWQATQSKMMKDGM 509
P +FIGL F + ++++ + + N V W S M
Sbjct: 468 -PGVQFCESFFIGLSFSLPKLPNQNGSKERKIDMSGPVSEWVNYVLSWPFRTS-----DM 521
Query: 510 KIEVRHVKKKQLSEYLPAHMLKKDKKTKSG----DQNTSAKKRKSD 551
++ V HVK+K L EY+ + +K KSG D+ +AK+RK +
Sbjct: 522 EVSVEHVKRKFLPEYVFKDENHRSRKRKSGIVYLDEIITAKERKVE 567
>gi|241955483|ref|XP_002420462.1| poly(A) polymerase, putative; polynucleotide adenylyltransferase,
putative [Candida dubliniensis CD36]
gi|223643804|emb|CAX41541.1| poly(A) polymerase, putative [Candida dubliniensis CD36]
Length = 558
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/398 (45%), Positives = 268/398 (67%), Gaps = 1/398 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++ + P + L + LK E+++ R+EVL+ LV+E++
Sbjct: 5 TYGVTEPISTNGPTPKENILNDTLIQELKNRGSFESEQATKKRVEVLTLFQQLVQEFVYT 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS +KN+ +A+ GGK++TFGSYRLGV+ G+DID L V P+HV R D+FS F + ++
Sbjct: 65 VSKSKNMSDAMAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRDDFFSVFADIIR 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +A+VP+IK+ FDGI ID++ A+L + +P D+ L D LLKNLD+K +
Sbjct: 125 KRPELEEIACVPDAYVPIIKIEFDGISIDLIMAKLNIPRVPLDLTLDDKNLLKNLDEKDL 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL+LVP F+ ALR IK+WA++ +Y N+ G+ GGV+WAMLVARICQ
Sbjct: 185 RSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA +S +V KFF ++++W WP+PVLLK ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVSSVIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ E +G +I +DI+ GK W LFE FF KY+ YL ++
Sbjct: 305 AYPSMCATHNITSSTQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLCVV 364
Query: 388 ASSV-SAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
A+++ SAE+ +W G IESK+R L+ LE + +AH
Sbjct: 365 AATIDSAEEHKKWSGFIESKLRQLVLKLEVAEGVEIAH 402
>gi|154316305|ref|XP_001557474.1| hypothetical protein BC1G_03738 [Botryotinia fuckeliana B05.10]
Length = 544
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/407 (45%), Positives = 261/407 (64%), Gaps = 5/407 (1%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
+ AP G+T L+ + P + Q T L E + N+ E+ + R VL+ L ++ +
Sbjct: 3 TAAPRQLGITPPLSTALPTDAEKQATDALIEEMTKENLFESRADTEKRSAVLASLQSITE 62
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
E++K V +N+P + GG+I+T+GS+RLGV+ G+DID L V P++V R +YF F
Sbjct: 63 EFVKRVCRKQNLPENIVNNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREEYFELF 122
Query: 143 ---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMDLRDDML 198
++ + DL V EAFVP+IK + GI ID++FAR+ L +I + L DD L
Sbjct: 123 PDLLVEMAPEGAIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLNDDNL 182
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L LD+ +RSLNG RVTD+IL LVP FR ALR +KLWA++ IY+N++G+ GGV+W
Sbjct: 183 LTGLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGVAW 242
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR+CQLYP A AST++ KFF + SQW+WPQPVLL+ L VW+PRV D
Sbjct: 243 AMLVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDG 302
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITP+YP +T N++ ST+ I+ E +G I++ I GK W LF FFT
Sbjct: 303 YHLMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTFFT 362
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
K Y++YL +I++S + E QL W GL+ESKVR L+ N+E + I LAH
Sbjct: 363 KNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVENHESIALAH 409
>gi|115397689|ref|XP_001214436.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
gi|114192627|gb|EAU34327.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
Length = 599
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/406 (45%), Positives = 264/406 (65%), Gaps = 4/406 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ P +L +L LK N E+ E R EVL L + E++K V
Sbjct: 9 WGVTPPISTVLPTPDELAANDDLIAELKRQNNFESPAETEQRKEVLKLLQRVTIEFVKVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + E GGKI+T+GSYRLGV+ G+DID L V P+ V D+FS F E+
Sbjct: 69 SRKKGLSEAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKQVLIDDFFSDFPPVLER 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ + + V +A+VP+IK+ GI ID++FARL + IP ++DL+++ L+ LD++
Sbjct: 129 MAPPGAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPINLDLKNNDYLRGLDER 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
VRSLNG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + ++W WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+ ++ E ++G + + I+ + W+ LF +FFTK Y++YL
Sbjct: 309 TPAYPSMCATHNVSMSTKNVILRELQRGGDMVDKIFMKQLTWNDLFARHSFFTKDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ A+S + E W GL+ESK+RHL+G L+R P I +AH P+ +
Sbjct: 369 RITAASTTKEADSVWSGLVESKIRHLVGALDRKPTIAVAHPFPKGF 414
>gi|347827997|emb|CCD43694.1| similar to Poly(A) polymerase [Botryotinia fuckeliana]
Length = 573
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/407 (46%), Positives = 262/407 (64%), Gaps = 5/407 (1%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
+ AP G+T L+ + P + Q T L E + N+ E+ + R VL+ L ++ +
Sbjct: 3 TAAPRQLGITPPLSTALPTDAEKQATDALIEEMTKENLFESRADTEKRSAVLASLQSITE 62
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
E++K V +N+P + GG+I+T+GS+RLGV+ G+DID L V P++V R +YF F
Sbjct: 63 EFVKRVCRKQNLPENIVNNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREEYFELF 122
Query: 143 FEKLKTV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMDLRDDML 198
+ L + + DL V EAFVP+IK + GI ID++FAR+ L +I + L DD L
Sbjct: 123 PDLLVEMAPEGAIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLNDDNL 182
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L LD+ +RSLNG RVTD+IL LVP FR ALR +KLWA++ IY+N++G+ GGV+W
Sbjct: 183 LTGLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGVAW 242
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR+CQLYP A AST++ KFF + SQW+WPQPVLL+ L VW+PRV D
Sbjct: 243 AMLVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDG 302
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITP+YP +T N++ ST+ I+ E +G I++ I GK W LF FFT
Sbjct: 303 YHLMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTFFT 362
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
K Y++YL +I++S + E QL W GL+ESKVR L+ N+E + I LAH
Sbjct: 363 KNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVENHESIALAH 409
>gi|355709238|gb|AES03525.1| poly polymerase alpha [Mustela putorius furo]
Length = 275
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/270 (70%), Positives = 227/270 (84%), Gaps = 1/270 (0%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 6 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 65
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 66 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 125
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 126 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 185
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWA H IYSN+LG+LGGVS
Sbjct: 186 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAXXHNIYSNILGFLGGVS 245
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQ 287
WAMLVAR CQLYPNA ASTLV KFFLVFS+
Sbjct: 246 WAMLVARTCQLYPNAIASTLVHKFFLVFSK 275
>gi|154282671|ref|XP_001542131.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
gi|150410311|gb|EDN05699.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
Length = 594
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/450 (42%), Positives = 282/450 (62%), Gaps = 11/450 (2%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ + P ++ +L LK N E E R + L + + E++K V
Sbjct: 9 WGVTPPVSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRVTVEFVKVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + + GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS F E
Sbjct: 69 SRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPPILEN 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ + L +V +A+VP+IK+ GI ID+++ARL + +P ++DLR+ LL+ LD+K
Sbjct: 129 MAPKGAIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPLNLDLRNKDLLRGLDEK 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + +QWKWPQPVLLK + L VW+P++ D+YHLMPII
Sbjct: 249 CQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+T++ E K+G I++ I+ G+ W+ LF FF++ Y++YL
Sbjct: 309 TPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY------TDTTGVIA 438
+ ++S S + Q W GL+ESK+RHL+G L+R I +AH P+ + D ++
Sbjct: 369 NITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEIAHPFPKGFERIHVCKDEKEIVE 428
Query: 439 NGSGSPEITAEG-KEEGGENTSPPVSGVAS 467
GS + A+G K E + ++ P AS
Sbjct: 429 VMGGSMKYQAKGTKTETTDESNDPQHTAAS 458
>gi|19073993|ref|NP_584599.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|19068635|emb|CAD25103.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|449329262|gb|AGE95535.1| poly (a) polymerase type 1 [Encephalitozoon cuniculi]
Length = 505
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/535 (38%), Positives = 318/535 (59%), Gaps = 39/535 (7%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
S+ YG+T L+ + +++ + E+ + L+ E D+E +R VL KLN +V+
Sbjct: 4 SEKSYKYGVTGPLSTRESTEEEIRLSGEMDKYLQERGFFEDDKEGQTRERVLGKLNFMVR 63
Query: 83 EWIKEVSIAKNIPPTVAEK-VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
E++ +A+N E+ GGKI+TFGSYRLGVH KGADIDALC+ PRHV R+D+F+
Sbjct: 64 EFV--ARMARNKGSGDGERPCGGKIFTFGSYRLGVHSKGADIDALCIVPRHVSRSDFFTH 121
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F+E+LK + ++ +E+AFVP+IK+ F GI ID++FARL++ + D ++L +D LLK+
Sbjct: 122 FYEELKGDPNIEEVTKIEDAFVPIIKLKFQGIPIDLVFARLSIPVVKDGINLLNDTLLKS 181
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D+KC+ SLNG RVTDE+L LVP+++ F ALR IK WAK+ +Y N GY GGV++++
Sbjct: 182 MDEKCILSLNGSRVTDEMLNLVPSVKTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLC 241
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR+CQLYPNA++ T+VCKFF +FS WKWP PV+L+ ++N VWDP+V +D+YH
Sbjct: 242 VARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHR 301
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MP+ITPAYP +T NVS ST+ ++ EF + I D + + ++FE +FF++YR
Sbjct: 302 MPVITPAYPSMCATHNVSNSTQHVITMEFTRAHKILSD--PERNDFRRIFELSDFFSRYR 359
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGS 441
++ ++A S ED +W G +ESK+R L E + A P+ +
Sbjct: 360 LFVEVLAMSSCEEDFPKWEGYLESKIRILASKFEAVDDVLYAIPFPKAFRVA-------- 411
Query: 442 GSPEITAEGKEEGGENTSPPVSGV--ASMWFIGLDFI---AANVILNLTYDIQHFTNAVH 496
EE E P + G+ + +FI +D I VI+ ++ F V
Sbjct: 412 ----------EESIEKIGPRMEGMKKCTAFFIAIDVIPVKGKKVIVE--QQVKEFIEFVR 459
Query: 497 WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSD 551
++ GM+IEV +K+K + +L K +S S+K+R+ +
Sbjct: 460 EYEGRA----SGMRIEVNSLKRKDVQGFLRVFYGK-----ESPSNEDSSKRRRVE 505
>gi|325090895|gb|EGC44205.1| poly(A) polymerase Pap [Ajellomyces capsulatus H88]
Length = 594
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/450 (42%), Positives = 282/450 (62%), Gaps = 11/450 (2%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ + P ++ +L LK N E E R + L + + E++K V
Sbjct: 9 WGVTPPVSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRVTVEFVKVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + + GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS F E
Sbjct: 69 SRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPPILEN 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ + L +V +A+VP+IK+ GI ID+++ARL + +P ++DLR+ LL+ LD+K
Sbjct: 129 MAPKGAIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPLNLDLRNKDLLRGLDEK 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + +QWKWPQPVLLK + L VW+P++ D+YHLMPII
Sbjct: 249 CQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+T++ E K+G I++ I+ G+ W+ LF FF++ Y++YL
Sbjct: 309 TPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY------TDTTGVIA 438
+ ++S S + Q W GL+ESK+RHL+G L+R I +AH P+ + D ++
Sbjct: 369 NITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEIAHPFPKGFERIHICKDEKEIVE 428
Query: 439 NGSGSPEITAEG-KEEGGENTSPPVSGVAS 467
GS + A+G K E + ++ P AS
Sbjct: 429 VMGGSMKYQAKGTKTETTDESNDPQHTAAS 458
>gi|302904195|ref|XP_003049022.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729956|gb|EEU43309.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 612
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/586 (37%), Positives = 322/586 (54%), Gaps = 67/586 (11%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ P +L+ T L E LK E+ + + R EVL+ + N+ +I++V
Sbjct: 7 YGVTPPISSQLPTDAELRATDALLEELKRQKTFESQADTAKREEVLASIQNIANAFIRQV 66
Query: 89 SIAKNIPPTV-AEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
+ K V G+++T+GSYRLGV+ G+DID L +AP++V R DYF F + L
Sbjct: 67 AQEKEPKNDVLIRNARGRVFTYGSYRLGVYGPGSDIDTLIIAPKYVTRDDYFKYFPDLLV 126
Query: 148 TV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDM-DLRDDMLLKNLD 203
++ D +T L V +AFVP+IK + GI ID++F+R+ K++P D +L+D LL+ LD
Sbjct: 127 SMAPKDAITGLAVVTDAFVPIIKFEYSGISIDLIFSRIIQKQLPPDFTNLKDSGLLRGLD 186
Query: 204 QKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVA 263
+ +RSLNG RVTDEIL LVP F+LALR IKLWA++ +Y+N++G+ GGV+WAMLVA
Sbjct: 187 EAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVA 246
Query: 264 RICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMP 323
R+CQLYP A S +V KFFLV SQW+WPQPVLLK ++ L VW+PRV D +HLMP
Sbjct: 247 RVCQLYPKATPSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPRVYKGDSFHLMP 306
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRH 382
+ITPAYP +TFN++ S+ ++ E + ISE I GK W LF FFT+ Y++
Sbjct: 307 VITPAYPSMCATFNITRSSMKVINRELSRALQISESIMVGKRPWSDLFVKHTFFTQGYKY 366
Query: 383 YLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHV-------NPECYTDT-T 434
Y+ +I+S+ S ED W G +ESKVR L+ LE++P I LAH + C++D
Sbjct: 367 YISVISSAKSKEDHKIWSGYVESKVRMLVQKLEQHPSIALAHAFNKGYDRHHRCHSDQEI 426
Query: 435 GVIANGS--------------------------------------GSPEIT-AEG----- 450
+ +GS PE T ++G
Sbjct: 427 AAVQDGSLDYLCTERTEETPVGKSEPAVAELPIKAEPEEDSKPIKSEPETTESDGIAKVE 486
Query: 451 --KEEGGENTSPPVSGVASMW----FIGLDFIAANVILNLTYDIQHFTN-AVHWQATQSK 503
K E + P GV ++ +IGL+ L+L+Y + F WQ + +
Sbjct: 487 VVKSETSDEVKPVAPGVTDVYTTTHYIGLELSGGAKSLDLSYQVDEFKELCTSWQKYKDE 546
Query: 504 MMKDGMKIEVRHVKKKQL-SEYLPAHMLKKDKKTKSGDQNTSAKKR 548
+K + I V+HV+ L + A K +K T+ KKR
Sbjct: 547 -LKTTVSIGVQHVRNFNLPDDVFDADEKKPQRKPVVAKGATNGKKR 591
>gi|358383352|gb|EHK21019.1| hypothetical protein TRIVIDRAFT_78180 [Trichoderma virens Gv29-8]
Length = 575
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/521 (40%), Positives = 306/521 (58%), Gaps = 32/521 (6%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNV----SETDEELSSRMEVLSKLNNLVKE 83
YG+T ++++ P + + + + L E L+ S+TD+ S R +VL+ L + E
Sbjct: 6 VYGVTPPISVTLPTEAEKRASDALIEELRRQKTFESPSDTDKRHSFRYKVLASLQEICNE 65
Query: 84 WIKEVSIAKNIPPTVAEK-VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
++++V+ K + K GK++T+GS+RLGV G+DID L VAP++V R DYF F
Sbjct: 66 FVRKVAREKEPKNEILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTREDYFKHF 125
Query: 143 FEKLKTV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMD-LRDDML 198
+ L ++ +TDL V +AFVP+IK + I ID++F+R+ K+I D D L+D L
Sbjct: 126 PDLLVSMAPPGSITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFDNLKDSSL 185
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L+ LD+ +RSLNG RVTDEIL LVP F+LALR IKLWA++ +Y+N++G+ GGV+W
Sbjct: 186 LRGLDEAELRSLNGTRVTDEILALVPEESTFKLALRAIKLWAQRRAVYANIMGFPGGVAW 245
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR+CQLYP AA S +V KFFLV QW+WPQPVLLK + L VW+P+V D
Sbjct: 246 AMLVARVCQLYPKAATSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDS 305
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
+HLMP+ITPAYP +TFN++ S+ +++Q E ++G ISE I GK W LF FFT
Sbjct: 306 FHLMPVITPAYPSMCATFNITRSSMSVIQRELRRGLEISEQIMVGKRPWSDLFVKHTFFT 365
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHV-------NPECY 430
YR+Y+ ++++S E W G +ESKVR L+ LE++P I LAH C
Sbjct: 366 SGYRYYISVVSASKDKEAHKVWSGYVESKVRMLVQKLEQHPSIALAHAFNKGYDRRHRCK 425
Query: 431 TD----------TTGVIANGSGSPEITAEGKEE---GGENTSPPVSGVASMWFIGLDFIA 477
D +I SGS E K E G TS PV + +IGL+
Sbjct: 426 NDHEIEQVQEGSLEFMIKEESGSQSGEIEPKPEVKDGSAETSSPVEVFTTTHYIGLELEE 485
Query: 478 ANVILNLTYDIQHF-TNAVHWQATQSKMMKDGMKIEVRHVK 517
L+L+Y + F W+ Q + ++ + + V+HV+
Sbjct: 486 GAKSLDLSYQVDEFKVLCTQWKKYQEE-LQPSVSLGVQHVR 525
>gi|294657491|ref|XP_459799.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
gi|199432733|emb|CAG88038.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
Length = 571
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/561 (38%), Positives = 316/561 (56%), Gaps = 42/561 (7%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
YG+T ++++ P + L + LK E++ R+EVL L L +E++
Sbjct: 5 AYGVTPPISVANPTPKENSLNDSLIKELKSRGSFESEAATKKRVEVLHILQKLTEEFVYT 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VSI KN+ +A+ GGKI+TFGSYRLGV+ G+DID L V P+HV R+D+F F + L+
Sbjct: 65 VSINKNMNEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTRSDFFEVFDKILR 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ +V +A+VP+IKM F GI ID++ ARL + IP D+ L D LL+N+D+K +
Sbjct: 125 KRPELEEIASVSDAYVPIIKMEFGGISIDLICARLDIPRIPKDLKLDDKNLLRNIDEKDL 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL LVP F+ ALR IK+WA++ IY+NV G+ GGV+WAMLVARICQ
Sbjct: 185 RSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ +V KFF +++QW WPQPVLLK ++ L VW+P++ DR H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFHIYAQWSWPQPVLLKPIEDGPLQVRVWNPKLYPHDRQHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ I+ +EFK+G I I K+ W L FF KY+ YL ++
Sbjct: 305 AYPSMCATHNITSSTQKIILDEFKRGIDIMSQISMNKSTWSDLLARHTFFYKYKFYLCIV 364
Query: 388 ASSV-SAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEI 446
A++ S+ED L+W G++ES++R LI LE I +AH + + ++ I
Sbjct: 365 AATQGSSEDHLKWGGMVESRLRLLIQKLEMTEGIEIAHPYVKPFENSYACENQAQAEEVI 424
Query: 447 TAEGKEEG-----------------------------GENTSPPVSGVASMWFIGLDF-- 475
G +G G+ S + + F+GLD
Sbjct: 425 NTYGTLQGESITKDLPEPLKKKEEENNETENKEEEKEGKQNSDSIEVHLTKLFVGLDIDL 484
Query: 476 -IAANVILNLTYDIQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSE--YLPAHM-- 529
++ L++ Y F N WQ K+ I+++HVK L Y+
Sbjct: 485 NKGSDKKLDIQYPCSEFFNICKGWQTYDEKL----HSIQIKHVKLYDLPNDVYIEGEERP 540
Query: 530 LKKDKKTKSGDQNTSAKKRKS 550
+K K+ +S ++ K+ KS
Sbjct: 541 VKNSKRKRSAAKDQGKKRPKS 561
>gi|367003753|ref|XP_003686610.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
gi|357524911|emb|CCE64176.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
Length = 555
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/398 (45%), Positives = 270/398 (67%), Gaps = 1/398 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
YG+T ++ + P + + EL + LK E+++E ++R++VL L L ++++ +
Sbjct: 6 VYGITGPVSTAAPTAAENKLNDELIQELKKEGSFESEQETNNRVKVLEILQKLTQDFVYK 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
V KN+ +A+ GGK++TFGSYRLGVH G+DID L V P++V R D+F+ F + L+
Sbjct: 66 VYKNKNMSDGMAKDAGGKVFTFGSYRLGVHGPGSDIDTLVVVPKYVTREDFFTVFDQSLR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +A+VP+IK+ F GI ID++ A+L + ++P ++ L D LL+NLD+K +
Sbjct: 126 ERKELDEIAPVPDAYVPIIKIKFSGISIDLICAKLDIAQVPINLQLNDKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y NV G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILELVPKPIIFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF + S+WKWPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 246 LYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVL- 386
AYP +T N++ ST+ ++ +EF++G I+ DI++ K W+ LF+ FF Y+ YL +
Sbjct: 306 AYPSMCATHNITESTKKVILKEFERGMKITNDIFSNKLTWNDLFKKHTFFYDYKFYLTIT 365
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
A+ + ED L+W GL+ESKVR LI LE P I L H
Sbjct: 366 TATKGTDEDHLKWSGLVESKVRLLILKLEALPGITLTH 403
>gi|149237693|ref|XP_001524723.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
gi|146451320|gb|EDK45576.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
Length = 587
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/398 (46%), Positives = 270/398 (67%), Gaps = 1/398 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++L+ P D + L + LK E++ R++VL+ L L + ++
Sbjct: 7 TYGVTPPISLANPTPKDNELNDLLIKELKLRGSFESEAATRKRVKVLNTLQKLTETFVYN 66
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS +KN+ +A GGK++TFGSYRLGV+ +DIDAL V PR++ R D+F+ F + L+
Sbjct: 67 VSRSKNMSEAMARDAGGKLFTFGSYRLGVYGPSSDIDALVVFPRYITREDFFTEFEKLLR 126
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ +V EAFVP+IK+ FDGI ID++FA+L + IP D+ L D LLKN+D+K +
Sbjct: 127 ERPELEEINSVREAFVPIIKLEFDGISIDLIFAKLDIPRIPKDLTLTDKNLLKNIDEKDL 186
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP F+ ALR IK+WA++ IY+NV G+ GGV+WAMLVARICQ
Sbjct: 187 RALNGTRVTDEILNLVPKPTVFKHALRFIKMWAQQRAIYANVYGFPGGVAWAMLVARICQ 246
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA +S +V KFF ++SQW WPQPVLLK+ ++ L VW+P++ DR H MP+ITP
Sbjct: 247 LYPNAVSSYIVEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPKLYSLDRQHRMPVITP 306
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ I+ +EF++G TI I +G W L + +FF +Y+ YL ++
Sbjct: 307 AYPSMCATHNITASTQKIILDEFQRGTTIMHGILDGTKNWLDLLQRHDFFHRYKFYLCVV 366
Query: 388 ASSVSA-EDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
A++ S E+ L++ G+ ESK+R L+ LE P + LAH
Sbjct: 367 AATKSTYEEHLKYSGMFESKLRLLVQKLEMVPGVELAH 404
>gi|320038983|gb|EFW20918.1| Poly(A) polymerase [Coccidioides posadasii str. Silveira]
Length = 590
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/503 (40%), Positives = 293/503 (58%), Gaps = 18/503 (3%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G T ++ + P +L L LK N E E R ++L + + E++K V
Sbjct: 9 WGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVKTV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
K + + GGKI+ +GSYRLGV+ G+DID L V P+HV D+F F E+
Sbjct: 69 GRRKGLSQAAIDVSGGKIFPYGSYRLGVYGPGSDIDTLVVGPKHVAIEDFFLDFPPTLER 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
L D + L V +A+VP+IK+ GI ID++FARL + IP D+DLR+ LL+ LD++
Sbjct: 129 LAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDER 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTDEIL LVP + FRLALR IKLWA+ IYSNV+G+ GGV+WAMLVAR+
Sbjct: 189 EIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + + W WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+ ++ E K+G I E I+ G+ W LF FF+K Y++YL
Sbjct: 309 TPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSP 444
+ ASS S E Q W GL+E+K+RHL+ L++ I +AH P+ + + + +GS
Sbjct: 369 NITASSTSKEAQSVWSGLVEAKLRHLVIALDKKASIEVAHPFPKAH---VAALESANGSI 425
Query: 445 EITAEGKEEGGENTSPPVSGVASMWFIGLDF----IAANVILNLTYDIQHFTNAVHWQAT 500
+ G+ E N + + ++IGL+ A+ L+++ + F N A
Sbjct: 426 NMPGLGQTEESNNH----TLHTTTYYIGLELKPLVPGASRSLDISSETHMFKNMCTSWAQ 481
Query: 501 QSKMMKDGMKIEVRHVKKKQLSE 523
+ D + + HV+ L E
Sbjct: 482 YQPGIND---LTITHVRNYDLPE 501
>gi|258563094|ref|XP_002582292.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
gi|237907799|gb|EEP82200.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
Length = 616
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/423 (44%), Positives = 266/423 (62%), Gaps = 21/423 (4%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYN----VSETDEELSS-------------RM 71
+G+T ++ P +L L LK N SET+ L + R
Sbjct: 9 WGVTPPISTVLPTPAELTENDNLIAELKHQNNFEAPSETERRLGTNIPYRFALLNINPRK 68
Query: 72 EVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPR 131
++L L + E+IK V K + + GGKI+TFGSYRLGV+ G+DID L V P+
Sbjct: 69 QILHLLQRVTIEFIKSVGRKKGLSQGAIDAAGGKIFTFGSYRLGVYGPGSDIDTLVVGPK 128
Query: 132 HVDRADYFSSF---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIP 188
HV R D+F+ F E+L D + L +V +AFVP++K+ GI ID++FARL + +P
Sbjct: 129 HVTREDFFADFPSTLEQLAPKDSIEKLTSVPDAFVPIMKLELSGISIDLIFARLVVHSVP 188
Query: 189 DDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSN 248
++DL++ LL+ LD++ +R +NG RVTDEIL LVP + FRLALR IKLWA+ IYSN
Sbjct: 189 LNLDLKNKELLRGLDERELRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQSRAIYSN 248
Query: 249 VLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPV 308
V+G+ GGV+WAMLVAR+CQLYP A S ++ KFF + +QW WPQPVLLK ++ L V
Sbjct: 249 VVGFPGGVAWAMLVARVCQLYPQATGSVIIGKFFRIMNQWNWPQPVLLKPIEDGPLHMKV 308
Query: 309 WDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWD 368
W+P++ DR+HLMPIITPAYP +T N+S+ST+ ++ E K+G I + I+ G+ W
Sbjct: 309 WNPKIYHGDRFHLMPIITPAYPSMCATHNISLSTKAVILRELKRGGDIVDKIFMGQLRWS 368
Query: 369 KLFETPNFFTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNP 427
LF +FF+K Y++YL + ASS + E Q W GL+ESK+RHL+ L+R I +AH P
Sbjct: 369 DLFAKHSFFSKDYKYYLSITASSTTKEAQSVWSGLVESKLRHLVLALDRKSSIEVAHPFP 428
Query: 428 ECY 430
+ +
Sbjct: 429 KGF 431
>gi|260941482|ref|XP_002614907.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
gi|238851330|gb|EEQ40794.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
Length = 557
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/398 (45%), Positives = 269/398 (67%), Gaps = 1/398 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++L+ P +++ L LK E+++ R+EVL+ N+V+E++
Sbjct: 5 TYGVTGPVSLANPTPNEIKLNDLLISELKARGSFESEQATKKRVEVLTLFQNMVQEFVYT 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A GGK++TFGSYRLGV+ G+DID L V P+HV R D+F+ F + ++
Sbjct: 65 VSKNKNMSDGMARDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVGREDFFTVFEQIIR 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ +V +AFVP+IK+ FDGI ID++++RL + +P DM L D LLKN+D+K +
Sbjct: 125 KRPELEEITSVPDAFVPIIKIEFDGISIDLIYSRLNVPRVPLDMTLEDKNLLKNIDEKDL 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL+LVP F+ ALR IK+WA++ +Y NV G+ GGV+WAML ARICQ
Sbjct: 185 RSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNVFGFPGGVAWAMLTARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA +T+V KFF ++++W WPQPVLLK ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVGATIVEKFFTIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ +E ++G I + +G+ W LFE +FF Y+ YL ++
Sbjct: 305 AYPSMCATHNITSSTQKVIMKELERGAEIMSLVASGEKTWADLFERHSFFHDYKFYLCIV 364
Query: 388 ASSVS-AEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
A++++ E+ +W G+IESK+R L+ LE I LAH
Sbjct: 365 AATLADDEEHHKWSGMIESKLRILVQKLEVTDGIALAH 402
>gi|126139251|ref|XP_001386148.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
gi|126093430|gb|ABN68119.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/428 (43%), Positives = 281/428 (65%), Gaps = 2/428 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++ + P + L L+ E+++ R+EVL++ +V+E++
Sbjct: 5 TYGVTDPISTANPTPKENSLNDALIGELRSRGSFESEQATKKRVEVLTQFQKMVQEFVFT 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A+ GGK++TFGSYRLGV+ G+D+D L V P+HV R D+F+ F E ++
Sbjct: 65 VSKKKNMSDGMAKDAGGKVFTFGSYRLGVYGPGSDLDTLVVVPQHVSREDFFTVFAEIIR 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ +DG+ +D++FA L + IP DM L D LL+NLD++ +
Sbjct: 125 KRPELEEIVPVPDAFVPIIKIEYDGVPLDLIFACLNVPRIPLDMTLDDKNLLRNLDERDL 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RVTDEIL+LVP F+ ALR IK+WA++ +Y NV G+ GGV+WAMLVARICQ
Sbjct: 185 RSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQKAVYGNVFGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ +V KFF ++++W WPQPVLLK ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYANDRLHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ E ++G + I GK W LF+ +FF Y+ YL ++
Sbjct: 305 AYPSMCATHNITSSTQKVILSELEKGAEVVRQINLGKKSWSDLFDRHDFFHHYKFYLCVV 364
Query: 388 ASSVSA-EDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEI 446
A++V++ E+ L+W GLIESK+RHL+ LE + LAH + ++D+ V+ + + S I
Sbjct: 365 AATVASDEEHLKWTGLIESKLRHLVLKLEVTEGVELAHPYVKDFSDSY-VLGDANPSDVI 423
Query: 447 TAEGKEEG 454
A G G
Sbjct: 424 GAYGTLSG 431
>gi|401624879|gb|EJS42918.1| pap1p [Saccharomyces arboricola H-6]
Length = 569
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/467 (41%), Positives = 290/467 (62%), Gaps = 21/467 (4%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T ++ + + L + LK ET+ E ++R++VL L L + ++ E
Sbjct: 6 VFGITGPVSTVGATAAENKLNDSLVQELKKEGSFETEHETANRVQVLKILQELAQRFVYE 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 66 VSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDALLR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ F GI ID++ ARL ++P + L D LL+NLD+K +
Sbjct: 126 ERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPQSLTLADKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y+N+ G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF++ S+W WPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 246 LYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ +EF++G I+ DI++ K W LFE +FF +Y+ YL +
Sbjct: 306 AYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDFFYRYKFYLEIT 365
Query: 388 ASSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYT-DTTGVIA 438
A + +++Q L+W GL+ESKVR LI LE I +AH + C T D +I
Sbjct: 366 AYTRGSDEQHLKWGGLVESKVRLLIMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEMIQ 425
Query: 439 NGSGS----------PEITAEGKEEGGENTSPPVSGVASMWFIGLDF 475
+ GS ++T E KE+ E+ + +IGLDF
Sbjct: 426 DKYGSHKTEAALKALKQVTDENKED--EDIKDKTKAYLTTMYIGLDF 470
>gi|323308211|gb|EGA61460.1| Pap1p [Saccharomyces cerevisiae FostersO]
Length = 568
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/467 (42%), Positives = 290/467 (62%), Gaps = 21/467 (4%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T ++ + + L + LK ET++E ++R++VL L L + ++ E
Sbjct: 6 VFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYE 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 66 VSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSLLR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ F GI ID++ ARL ++P + L D LL+NLD+K +
Sbjct: 126 ERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y+N+ G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF++ S+W WPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 246 LYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ +EF +G I+ DI++ K W LFE +FF +Y+ YL +
Sbjct: 306 AYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEIT 365
Query: 388 ASSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYT-DTTGVIA 438
A + +++Q L+W GL+ESKVR L+ LE I +AH + C T D +I
Sbjct: 366 AYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEMIQ 425
Query: 439 NGSGSPE----------ITAEGKEEGGENTSPPVSGVASMWFIGLDF 475
+ GS + +T E KEE +P S +IGLDF
Sbjct: 426 DKYGSHKTEKALNALKLVTDENKEEESIKDAP--KAYLSTMYIGLDF 470
>gi|398364849|ref|NP_012927.3| Pap1p [Saccharomyces cerevisiae S288c]
gi|266739|sp|P29468.1|PAP_YEAST RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|3527|emb|CAA46250.1| polyA polymerase 1 [Saccharomyces cerevisiae]
gi|4099|emb|CAA42852.1| poly(A)polymerase [Saccharomyces cerevisiae]
gi|486407|emb|CAA82072.1| PAP1 [Saccharomyces cerevisiae]
gi|151941547|gb|EDN59910.1| poly(A) polymerase [Saccharomyces cerevisiae YJM789]
gi|190409824|gb|EDV13089.1| poly(A) polymerase [Saccharomyces cerevisiae RM11-1a]
gi|259147834|emb|CAY81084.1| Pap1p [Saccharomyces cerevisiae EC1118]
gi|285813261|tpg|DAA09158.1| TPA: Pap1p [Saccharomyces cerevisiae S288c]
gi|323304127|gb|EGA57905.1| Pap1p [Saccharomyces cerevisiae FostersB]
gi|349579565|dbj|GAA24727.1| K7_Pap1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298143|gb|EIW09241.1| Pap1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|228305|prf||1802393A poly(A) polymerase
Length = 568
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/467 (42%), Positives = 290/467 (62%), Gaps = 21/467 (4%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T ++ + + L + LK ET++E ++R++VL L L + ++ E
Sbjct: 6 VFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYE 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 66 VSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSLLR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ F GI ID++ ARL ++P + L D LL+NLD+K +
Sbjct: 126 ERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y+N+ G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF++ S+W WPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 246 LYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ +EF +G I+ DI++ K W LFE +FF +Y+ YL +
Sbjct: 306 AYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEIT 365
Query: 388 ASSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYT-DTTGVIA 438
A + +++Q L+W GL+ESKVR L+ LE I +AH + C T D +I
Sbjct: 366 AYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEMIQ 425
Query: 439 NGSGSPE----------ITAEGKEEGGENTSPPVSGVASMWFIGLDF 475
+ GS + +T E KEE +P S +IGLDF
Sbjct: 426 DKYGSHKTETALNALKLVTDENKEEESIKDAP--KAYLSTMYIGLDF 470
>gi|207343429|gb|EDZ70889.1| YKR002Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271932|gb|EEU06953.1| Pap1p [Saccharomyces cerevisiae JAY291]
Length = 568
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/467 (42%), Positives = 290/467 (62%), Gaps = 21/467 (4%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T ++ + + L + LK ET++E ++R++VL L L + ++ E
Sbjct: 6 VFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYE 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 66 VSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSLLR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ F GI ID++ ARL ++P + L D LL+NLD+K +
Sbjct: 126 ERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y+N+ G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF++ S+W WPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 246 LYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ +EF +G I+ DI++ K W LFE +FF +Y+ YL +
Sbjct: 306 AYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEIT 365
Query: 388 ASSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYT-DTTGVIA 438
A + +++Q L+W GL+ESKVR L+ LE I +AH + C T D +I
Sbjct: 366 AYTRGSDEQHLKWSGLVESKVRLLVMKLEVLTGIKIAHPFTKPFESSYCCPTEDDYEMIQ 425
Query: 439 NGSGSPE----------ITAEGKEEGGENTSPPVSGVASMWFIGLDF 475
+ GS + +T E KEE +P S +IGLDF
Sbjct: 426 DKYGSHKTETALNALKLVTDENKEEESIKDAP--KAYLSTMYIGLDF 470
>gi|126031338|pdb|2O1P|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
gi|126031339|pdb|2O1P|B Chain B, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
Length = 546
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/467 (42%), Positives = 290/467 (62%), Gaps = 21/467 (4%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T ++ + + L + LK ET++E ++R++VL L L + ++ E
Sbjct: 6 VFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYE 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 66 VSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSLLR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ F GI ID++ ARL ++P + L D LL+NLD+K +
Sbjct: 126 ERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y+N+ G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF++ S+W WPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 246 LYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ +EF +G I+ DI++ K W LFE +FF +Y+ YL +
Sbjct: 306 AYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEIT 365
Query: 388 ASSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYT-DTTGVIA 438
A + +++Q L+W GL+ESKVR L+ LE I +AH + C T D +I
Sbjct: 366 AYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEMIQ 425
Query: 439 NGSGSPE----------ITAEGKEEGGENTSPPVSGVASMWFIGLDF 475
+ GS + +T E KEE +P S +IGLDF
Sbjct: 426 DKYGSHKTETALNALKLVTDENKEEESIKDAP--KAYLSTMYIGLDF 470
>gi|365764657|gb|EHN06179.1| Pap1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 488
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/478 (41%), Positives = 293/478 (61%), Gaps = 21/478 (4%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T ++ + + L + LK ET++E ++R++VL L L + ++ E
Sbjct: 6 VFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYE 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 66 VSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSLLR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ F GI ID++ ARL ++P + L D LL+NLD+K +
Sbjct: 126 ERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y+N+ G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF++ S+W WPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 246 LYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ T+ ++ +EF +G I+ DI++ K W LFE +FF +Y+ YL +
Sbjct: 306 AYPSMCATHNITECTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEIT 365
Query: 388 ASSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYT-DTTGVIA 438
A + +++Q L+W GL+ESKVR L+ LE I +AH + C T D +I
Sbjct: 366 AYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEMIQ 425
Query: 439 NGSGSPE----------ITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTY 486
+ GS + +T E KEE +P S +IGLDF N LT+
Sbjct: 426 DKYGSHKTETALNALKLVTDENKEEESIKDAP--KAYLSTMYIGLDFNIENKRKKLTF 481
>gi|126030614|pdb|2HHP|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Closed
Conformation
Length = 530
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/467 (42%), Positives = 290/467 (62%), Gaps = 21/467 (4%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T ++ + + L + LK ET++E ++R++VL L L + ++ E
Sbjct: 6 VFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYE 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 66 VSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSLLR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ F GI ID++ ARL ++P + L D LL+NLD+K +
Sbjct: 126 ERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y+N+ G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF++ S+W WPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 246 LYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ +EF +G I+ DI++ K W LFE +FF +Y+ YL +
Sbjct: 306 AYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEIT 365
Query: 388 ASSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYT-DTTGVIA 438
A + +++Q L+W GL+ESKVR L+ LE I +AH + C T D +I
Sbjct: 366 AYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEMIQ 425
Query: 439 NGSGSPE----------ITAEGKEEGGENTSPPVSGVASMWFIGLDF 475
+ GS + +T E KEE +P S +IGLDF
Sbjct: 426 DKYGSHKTETALNALKLVTDENKEEESIKDAP--KAYLSTMYIGLDF 470
>gi|10120664|pdb|1FA0|A Chain A, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|10120665|pdb|1FA0|B Chain B, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|188595983|pdb|3C66|A Chain A, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
gi|188595984|pdb|3C66|B Chain B, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
Length = 537
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/467 (42%), Positives = 290/467 (62%), Gaps = 21/467 (4%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T ++ + + L + LK ET++E ++R++VL L L + ++ E
Sbjct: 6 VFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYE 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 66 VSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSLLR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ F GI ID++ ARL ++P + L D LL+NLD+K +
Sbjct: 126 ERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y+N+ G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF++ S+W WPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 246 LYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ +EF +G I+ DI++ K W LFE +FF +Y+ YL +
Sbjct: 306 AYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEIT 365
Query: 388 ASSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYT-DTTGVIA 438
A + +++Q L+W GL+ESKVR L+ LE I +AH + C T D +I
Sbjct: 366 AYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEMIQ 425
Query: 439 NGSGSPE----------ITAEGKEEGGENTSPPVSGVASMWFIGLDF 475
+ GS + +T E KEE +P S +IGLDF
Sbjct: 426 DKYGSHKTETALNALKLVTDENKEEESIKDAP--KAYLSTMYIGLDF 470
>gi|156037648|ref|XP_001586551.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980]
gi|154697946|gb|EDN97684.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/407 (45%), Positives = 263/407 (64%), Gaps = 5/407 (1%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
+ AP G+T L+ + P + Q T L E L N E+ + R VL+ L N+ +
Sbjct: 3 TAAPKQLGITPPLSTALPTDAEKQATDALIEELTRENNFESRADTDKRTAVLASLQNITE 62
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
E++K V +N+P GG+I+T+GS+RLGV+ G+DID L V P++V R +YF F
Sbjct: 63 EFVKRVCRKQNLPENYINNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREEYFEMF 122
Query: 143 ---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMDLRDDML 198
++ + DL V+EA+VP+IK + GI ID++FAR+ L ++P + L+DD L
Sbjct: 123 PDLLVEMAPKGAIEDLTPVQEAYVPIIKFEYSGISIDLIFARIDTLTQVPRTLTLKDDNL 182
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L LD +RS+NG RVTD+I+ LVP FR ALR +KLWA++ IY+N++G+ GGV+W
Sbjct: 183 LTGLDDAGLRSVNGTRVTDDIMDLVPEKAVFRNALRGVKLWAQRRAIYANIMGFPGGVAW 242
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR+CQLYP A AST++ KFF + +W+WPQPVLL++ N L VW+PRV +D
Sbjct: 243 AMLVARVCQLYPQATASTIILKFFRIMEKWQWPQPVLLQQIKNGKLNVRVWNPRVYKSDS 302
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
+HLMPIITP+YP +T NV+ ST+ I+ E +G I + I GK W LF+ FFT
Sbjct: 303 FHLMPIITPSYPSMCATHNVTKSTKEIICRELARGGNIVDRIMMGKAPWKDLFQKHTFFT 362
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
K Y++YL +I++S + E QL W GL+ESKVR L+ NLE + I LAH
Sbjct: 363 KNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVTNLETHESIALAH 409
>gi|401825414|ref|XP_003886802.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
gi|392997958|gb|AFM97821.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
Length = 506
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/534 (39%), Positives = 309/534 (57%), Gaps = 40/534 (7%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
S+ YG+T L++ + D++ + E+ L+ E +E +R VL KLN +VK
Sbjct: 4 SERSYKYGVTGPLSMKESTEEDIRLSEEMDTYLQERGFFEDCKEGQTRERVLGKLNFMVK 63
Query: 83 EWIKEVSIAKNIPPTVAEKV-GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
E++ +AKN EK GGKI+TFGSYRLGVH KG DIDALC+ PRHV R+D+F+
Sbjct: 64 EFV--ARMAKNKGNGDGEKAYGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTRSDFFTY 121
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F+E+LK + + +E+AFVP+IK F GI ID++FARL + + D ++L +D LLK+
Sbjct: 122 FYEELKEDPNIEGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKS 181
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D+KC+ SLNG RVTDE+L LVPN++ F ALR IK WAK+ +Y N GY GGV++++
Sbjct: 182 MDEKCILSLNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLC 241
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR+CQLYPNA++ T+VCKFF +FS WKWP PV+L+ ++N VWDP+V +D+YH
Sbjct: 242 VARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHR 301
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MP+ITPAYP +T NVS ST+ ++ EF + I + K + ++FE +FF++Y+
Sbjct: 302 MPVITPAYPSMCATHNVSNSTQHVITMEFSRAHEILSN--PEKNDFRRIFELSDFFSRYK 359
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGS 441
++ ++A S S E +W G +ESK+R L E I A P+ +
Sbjct: 360 LFVEVLAMSTSEEGFAKWEGYVESKIRILASKFEAVDDILYAIPFPKAF----------- 408
Query: 442 GSPEITAEGKEEGGENTSPPVSGV--ASMWFIGLDFIAAN----VILNLTYDIQHFTNAV 495
EE P S V + +FI +D I V+ + F
Sbjct: 409 -------RVGEESIRKIRPGASEVKKCTAFFIAIDIIPVKGKKVVVEQQVKEFMEFIK-- 459
Query: 496 HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRK 549
++ +S M+IEV +KKK + +L KD S D+N K+RK
Sbjct: 460 EYEGKES-----SMRIEVNSLKKKDIQGFLRV-FYGKDDNLSSEDEN---KRRK 504
>gi|448086239|ref|XP_004196053.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359377475|emb|CCE85858.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/510 (39%), Positives = 305/510 (59%), Gaps = 25/510 (4%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ + P + L LK E++ R+EVL++L + ++++ EV
Sbjct: 6 YGVTPPISTANPTAKENSLNDSLIRELKARGSFESEAATRKRVEVLNELQKMAEKFVYEV 65
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S+ KN+ +A GGKI+TFGSYRLGV+ G+DIDAL V P+HV R D+F F + L+
Sbjct: 66 SLQKNMSDGMARDAGGKIFTFGSYRLGVYGPGSDIDALVVVPKHVTRNDFFEVFEKILRE 125
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
E+ ++ AV +A+VP+IKM +GI ID++FARL + ++P D+ L D LL+N+D+K +R
Sbjct: 126 RKELEEIAAVPDAYVPIIKMVLNGISIDLIFARLDVPKVPKDLKLDDKNLLRNIDEKDLR 185
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RVTDEIL LVP F+ ALR IK+WA++ IY+NV G+ GGV+WAMLVARICQL
Sbjct: 186 SLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQL 245
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ +V KFF +++QW WPQPVLLK+ ++ L VW+PR+ DR H MP+ITPA
Sbjct: 246 YPNAVSAVVVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPA 305
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N++ ST+ I+ +EF++G I I W L FF Y+ YL ++A
Sbjct: 306 YPSMCATHNITSSTQKIIMKEFRRGIDIMNQISGNNKTWANLLARHTFFHNYKFYLCIVA 365
Query: 389 SSV-SAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY---------------TD 432
++ S E+ ++W G++ES++R L+ LE I LAH + + +
Sbjct: 366 ATKGSYEEHIKWSGMVESRLRILVQKLELTEGIELAHPYVKTFEHSFSSNDSEKIQEVIN 425
Query: 433 TTGVIANGSGSPEIT-AEGKEEGGENTSPPVSGVASMWFIGLDF---IAANVILNLTYDI 488
+ G + + ++T + + + E++S + + FIGL+ L++ Y
Sbjct: 426 SYGTLQGEKLTKDVTQTDPQNKESEDSSDTIKVHLTKLFIGLEIDLNKGGEKKLDIQYPC 485
Query: 489 QHFTNAVH-WQATQSKMMKDGMKIEVRHVK 517
F N WQ+ K+ ++++HVK
Sbjct: 486 SEFFNICKSWQSYDEKL----HSVQIKHVK 511
>gi|359484334|ref|XP_002280350.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
gi|297738746|emb|CBI27991.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/533 (38%), Positives = 300/533 (56%), Gaps = 36/533 (6%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ P ++R+ EL + L V + +EE R E++ KL +VK W+K+V
Sbjct: 11 FGLTKPISYVKPTDFHIRRSFELEKVLWDGGVYQVEEEARKREEIIEKLRVVVKSWVKQV 70
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLK 147
+ K + E I TFGSYRLGVH G+DID LC+ P +V+R D+F L
Sbjct: 71 TRWKGYTDKMVENANALIVTFGSYRLGVHGPGSDIDTLCIGPSYVNREEDFFIRLHNILI 130
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
++ V++L + A VPV+K F+G+ ID+L+A ++ +PDD+D+ ++ +L D+ V
Sbjct: 131 GMEGVSELLPIPHAHVPVMKFKFEGVSIDLLYASVSHLVVPDDLDISNESILYEADEPTV 190
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSL+GCRV D+ILRLVPN+E+FR LR +K WAK+ G+YSNV G+LGGV+ A+LVAR+CQ
Sbjct: 191 RSLSGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVARVCQ 250
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA S LV +FF V++QW WP PV+L ++ LGFPVWDPR N DR H MPIITP
Sbjct: 251 LYPNANPSMLVSRFFRVYTQWHWPNPVMLCPIEDKELGFPVWDPRRNPLDRNHHMPIITP 310
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP NS+++VS ST M ++F I DI K+ W LFE FF Y++YL +
Sbjct: 311 AYPNMNSSYSVSTSTLEAMMKQFHTANKICNDIELNKSSWGALFEPFLFFRSYQNYLQVD 370
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHV-NPECYTDTTGVIANGSGSPEI 446
++ A+D W G +ES++R L +ER L V P Y DT+ + +
Sbjct: 371 ITATDADDLRAWKGWVESRLRQLTLKVERCTIGKLLCVPCPREYVDTSRQCCHCT----- 425
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGLD---FIAANVILNLTYDIQHFTNAVHWQATQSK 503
+F+GL + ++++ Q F +
Sbjct: 426 ----------------------YFMGLRKKPGVEVGEVIDIRVATQEFKEEI---VNMFS 460
Query: 504 MMKDGMKIEVRHVKKKQLSEYL-PAHMLKKDKKTKSGDQNTSAKKRKSDQALD 555
GM+I V HV K QL Y+ P K+ + +KS +Q K++ + + +D
Sbjct: 461 FWTPGMEIHVSHVLKNQLPSYVFPDEYRKRSQSSKSINQQHQNKRKINSEMVD 513
>gi|392870480|gb|EAS32287.2| Poly(A) polymerase PAPalpha [Coccidioides immitis RS]
Length = 599
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/406 (45%), Positives = 257/406 (63%), Gaps = 4/406 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G T ++ + P +L L LK N E E R ++L + + E++K V
Sbjct: 9 WGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVKTV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
K + + GGKI+ +GSYRLGV+ G+DID L V P+HV D+F F E+
Sbjct: 69 GRRKGLSQAAIDVSGGKIFAYGSYRLGVYGPGSDIDTLVVGPKHVAIEDFFLDFPPTLER 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ D + L V +A+VP+IK+ GI ID++FARL + IP D+DLR+ LL+ LD++
Sbjct: 129 MAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDER 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTDEIL LVP + FRLALR IKLWA+ IYSNV+G+ GGV+WAMLVAR+
Sbjct: 189 EIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + + W WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+ ++ E K+G I E I+ G+ W LF FF+K Y++YL
Sbjct: 309 TPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ ASS S E Q W GL+E+K+RHL+ L++ I++AH P+ +
Sbjct: 369 NITASSTSKEAQSVWSGLVEAKLRHLVIALDKKASIDVAHPFPKGF 414
>gi|401409652|ref|XP_003884274.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
gi|325118692|emb|CBZ54243.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
Length = 701
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/547 (40%), Positives = 312/547 (57%), Gaps = 47/547 (8%)
Query: 7 SNSMQTSKPHQDGKPQSQA-PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDE 65
S + S+ DG +Q P +G+T +N+ P D+ R+ EL L+ N+ ET
Sbjct: 93 SRGLLWSRAMGDGPIITQTTPYLFGVTNPVNMKLPQDADIHRSNELISVLRALNLYETAA 152
Query: 66 ELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDA 125
R VL++LN +V EW+ EV + + + A + GGKI+TFGSYRLGV G+DID
Sbjct: 153 GNLLRERVLNELNRIVVEWVVEVGMEQGLDEQEARQAGGKIFTFGSYRLGVTTPGSDIDT 212
Query: 126 LCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALK 185
LCV PRHV R +F KL+ V+ L V +A+ PV+K NFDG+EID+LFARL L
Sbjct: 213 LCVTPRHVTREAFFKILHAKLQQDARVSKLTPVPDAYTPVLKFNFDGVEIDLLFARLPLP 272
Query: 186 EIPDDMD-LRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHG 244
IP + L +D +L+++D+K RS+NG RV D +L+LVPN E F++ LR +K WAK G
Sbjct: 273 VIPSSWNSLENDFVLRHVDEKTARSVNGSRVADLVLKLVPNKETFKVTLRFVKHWAKVRG 332
Query: 245 IYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWP-QPVLLKKPDNVN 303
IYSNVLGYLGG+SWA+LVAR CQLYPN A S L+ +FF V+S WKW PVLL K
Sbjct: 333 IYSNVLGYLGGISWAILVARCCQLYPNFAPSQLIHRFFTVYSIWKWKNSPVLLCKIKEHT 392
Query: 304 L----GFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISED 359
+ F +W+P+VNV DR+HL+PIITPA+P NST NVS+ST+ ++ +EF K I D
Sbjct: 393 VEGLSNFKIWNPKVNVQDRHHLLPIITPAFPSMNSTHNVSLSTKRVITDEFANAKRIF-D 451
Query: 360 IYNGK--TMWDK---LFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNL 414
+++ K W + L P FT ++H+L L + + +W G +ESKVR L+ L
Sbjct: 452 VWDKKKEISWTEALHLVLKPLDFTSFKHFLELQIFAQNETVHRKWLGWVESKVRFLVRQL 511
Query: 415 ERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSP---------PVSGV 465
ER LA P A G +P K E P P
Sbjct: 512 ER-----LAACPP---------FAAGGHTP------KSEAAMTVRPIPCTFSFQEPGWEY 551
Query: 466 ASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYL 525
AS + L+F +++L F + ++ Q + ++ +++ V+HV++ Q L
Sbjct: 552 ASSMLVALNFAQQPCVIDLRPAAGEFVDLIN-QWPERAQLEGQIQLRVKHVRRSQ----L 606
Query: 526 PAHMLKK 532
PA++LK+
Sbjct: 607 PAYVLKQ 613
>gi|401840600|gb|EJT43353.1| PAP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 569
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/467 (41%), Positives = 290/467 (62%), Gaps = 21/467 (4%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T ++ + + L + LK ET++E ++R++VL L L + ++ E
Sbjct: 6 VFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYE 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 66 VSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVIREDFFTVFDALLR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ F GI ID++ ARL ++P + L D LL+NLD+K +
Sbjct: 126 ERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y+N+ G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF++ S+W WPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 246 LYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ +EF++G I+ DI++ K W LFE +FF +Y+ YL +
Sbjct: 306 AYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEIT 365
Query: 388 ASSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYT-DTTGVIA 438
A + +++Q L+W GL+ESKVR L+ LE I +AH + C T D +I
Sbjct: 366 AYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEMIQ 425
Query: 439 NGSGSPE----------ITAEGKEEGGENTSPPVSGVASMWFIGLDF 475
+ GS + +T E KE GE + +IGLDF
Sbjct: 426 DKYGSHKTELALNALQLVTDENKE--GETIKDKPKAYLTTMYIGLDF 470
>gi|303317852|ref|XP_003068928.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108609|gb|EER26783.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 599
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/406 (45%), Positives = 256/406 (63%), Gaps = 4/406 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G T ++ + P +L L LK N E E R ++L + + E++K V
Sbjct: 9 WGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVKTV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
K + + GGKI+ +GSYRLGV+ G+DID L V P+HV D+F F E+
Sbjct: 69 GRRKGLSQAAIDVSGGKIFPYGSYRLGVYGPGSDIDTLVVGPKHVAIEDFFLDFPPTLER 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
L D + L V +A+VP+IK+ GI ID++FARL + IP D+DLR+ LL+ LD++
Sbjct: 129 LAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDER 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTDEIL LVP + FRLALR IKLWA+ IYSNV+G+ GGV+WAMLVAR+
Sbjct: 189 EIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + + W WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+ ++ E K+G I E I+ G+ W LF FF+K Y++YL
Sbjct: 309 TPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ ASS S E Q W GL+E+K+RHL+ L++ I +AH P+ +
Sbjct: 369 NITASSTSKEAQSVWSGLVEAKLRHLVIALDKKASIEVAHPFPKGF 414
>gi|367008660|ref|XP_003678831.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
gi|359746488|emb|CCE89620.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
Length = 582
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/397 (45%), Positives = 262/397 (65%), Gaps = 1/397 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ + + + L + LK E+++E +R++VL L L +E++ V
Sbjct: 7 YGITGPVSTAGSTAAENKLNDGLIQELKKEGSFESEQETENRVKVLKTLQELTQEFVYRV 66
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S KN+ +A GGK++ +GSYRLGVH G+DID L V P+HV R D+F+ F E L+
Sbjct: 67 SKKKNMSDGMARDAGGKVFPYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDELLRG 126
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
E+ ++ AV +AFVP+IKM F GI ID++ A L L +IP + L D LL+NLD+K +R
Sbjct: 127 RQELEEIAAVPDAFVPIIKMKFSGISIDLICAHLDLAQIPQSLTLADKNLLRNLDEKDLR 186
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
+LNG RVTDEIL LVP FR+ALR IKLWA++ IY+NV G+ GGV+WAMLVARICQL
Sbjct: 187 ALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAIYANVFGFPGGVAWAMLVARICQL 246
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ ++ +FF + S+WKWPQPV+LK ++ L VW+P++ DR H MP+ITPA
Sbjct: 247 YPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPA 306
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL-VLI 387
YP +T N++ ST+ ++ E +G I+ DI+ K W LF+ FF +Y+ YL V+
Sbjct: 307 YPSMCATHNITESTKKVILGELGRGIRITNDIFTNKKTWADLFQRHTFFHEYKFYLTVMA 366
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
A++ +E L+W G++ESKVR L+ LE I +AH
Sbjct: 367 ATNGDSEQHLKWSGMVESKVRLLVLKLEALTGIKIAH 403
>gi|125597568|gb|EAZ37348.1| hypothetical protein OsJ_21686 [Oryza sativa Japonica Group]
Length = 761
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/558 (36%), Positives = 311/558 (55%), Gaps = 36/558 (6%)
Query: 20 KPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
+PQ Q YG+T ++L+ P ++DLQ+T EL + L + E+ EE + R EVL +L+
Sbjct: 15 QPQKQ----YGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDK 70
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DY 138
+VK+W+K+++ + + E+ ++TFGSYRLGVH GADID LCV P +V+R D+
Sbjct: 71 IVKDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDF 130
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F + L +EVT+L+ V +A VPV+K F GI ID+L+A ++L +P D+D+ +
Sbjct: 131 FIVLHDILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSV 190
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L ++D+ VRSLNGCRV D+ILRLVPN+E+ L + + + + V G+LGGV+W
Sbjct: 191 LYDVDEVTVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN--AKVTGFLGGVNW 248
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
A+LVAR+CQLYPNA S LV +FF VF+QW+WP PV+L + LGFPVWDPR DR
Sbjct: 249 ALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDR 308
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
H MPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 309 SHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFE 368
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVI 437
Y++YL + + ED W G +ES++R L +ER+ + L H P Y D +
Sbjct: 369 AYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 428
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI-AANVILNLTYDIQHFTNAVH 496
A+ + +F+GL A + +DI+ +
Sbjct: 429 AHCA---------------------------FFMGLSRKEGAKIQEGQQFDIRGTVDEFR 461
Query: 497 WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDE 556
+ GM++ V HV++KQ+ Y+ K+ + ++ + + K +
Sbjct: 462 HDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHINHPQQSNKNDVEDGTAN 521
Query: 557 LGDKSRPRLDSDSNSLSD 574
+P+ D+ + D
Sbjct: 522 RSPDGQPKRKHDTAGVYD 539
>gi|125555729|gb|EAZ01335.1| hypothetical protein OsI_23369 [Oryza sativa Indica Group]
Length = 760
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/558 (36%), Positives = 311/558 (55%), Gaps = 36/558 (6%)
Query: 20 KPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
+PQ Q YG+T ++L+ P ++DLQ+T EL + L + E+ EE + R EVL +L+
Sbjct: 15 QPQKQ----YGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDK 70
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DY 138
+VK+W+K+++ + + E+ ++TFGSYRLGVH GADID LCV P +V+R D+
Sbjct: 71 IVKDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDF 130
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F + L +EVT+L+ V +A VPV+K F GI ID+L+A ++L +P D+D+ +
Sbjct: 131 FIVLHDILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSV 190
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L ++D+ VRSLNGCRV D+ILRLVPN+E+ L + + + + V G+LGGV+W
Sbjct: 191 LYDVDEVTVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN--AKVTGFLGGVNW 248
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
A+LVAR+CQLYPNA S LV +FF VF+QW+WP PV+L + LGFPVWDPR DR
Sbjct: 249 ALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDR 308
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
H MPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 309 SHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFE 368
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVI 437
Y++YL + + ED W G +ES++R L +ER+ + L H P Y D +
Sbjct: 369 AYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 428
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI-AANVILNLTYDIQHFTNAVH 496
A+ + +F+GL A + +DI+ +
Sbjct: 429 AHCA---------------------------FFMGLSRKEGAKIQEGQQFDIRGTVDEFR 461
Query: 497 WQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDE 556
+ GM++ V HV++KQ+ Y+ K+ + ++ + + K +
Sbjct: 462 HDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHINHPQQSNKNDVEDGTAN 521
Query: 557 LGDKSRPRLDSDSNSLSD 574
+P+ D+ + D
Sbjct: 522 RSPDGQPKRKHDTAGVYD 539
>gi|158429647|pdb|2Q66|A Chain A, Structure Of Yeast Poly(A) Polymerase With Atp And
Oligo(A)
Length = 525
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/467 (41%), Positives = 289/467 (61%), Gaps = 21/467 (4%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T ++ + + L + LK ET++E ++R++VL L L + ++ E
Sbjct: 2 VFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYE 61
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 62 VSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSLLR 121
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ F GI I ++ ARL ++P + L D LL+NLD+K +
Sbjct: 122 ERKELDEIAPVPDAFVPIIKIKFSGISIALICARLDQPQVPLSLTLSDKNLLRNLDEKDL 181
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y+N+ G+ GGV+WAMLVARICQ
Sbjct: 182 RALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQ 241
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF++ S+W WPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 242 LYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 301
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ +EF +G I+ DI++ K W LFE +FF +Y+ YL +
Sbjct: 302 AYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEIT 361
Query: 388 ASSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYT-DTTGVIA 438
A + +++Q L+W GL+ESKVR L+ LE I +AH + C T D +I
Sbjct: 362 AYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEMIQ 421
Query: 439 NGSGSPE----------ITAEGKEEGGENTSPPVSGVASMWFIGLDF 475
+ GS + +T E KEE +P S +IGLDF
Sbjct: 422 DKYGSHKTETALNALKLVTDENKEEESIKDAP--KAYLSTMYIGLDF 466
>gi|448081751|ref|XP_004194965.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359376387|emb|CCE86969.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/510 (38%), Positives = 303/510 (59%), Gaps = 25/510 (4%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ + P + L LK E++ R+EVL++L + + ++ EV
Sbjct: 6 YGVTPPISTANPTAKENSLNDSLIRELKARGSFESEAATRKRVEVLNELQKMAERFVYEV 65
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S+ KN+ +A GGKI+TFGSYRLGV+ G+DIDAL V P+HV R D+F F + L+
Sbjct: 66 SLQKNMSDGMARDAGGKIFTFGSYRLGVYGPGSDIDALVVVPKHVTRNDFFEVFEKILRE 125
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
++ ++ AV +A+VP+IKM +GI ID++FARL + ++P D+ L D LL+N+D+K +R
Sbjct: 126 RKDLEEIAAVPDAYVPIIKMILNGISIDLIFARLDVPKVPKDLKLDDKNLLRNIDEKDLR 185
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RVTDEIL LVP F+ ALR IK+WA++ IY+NV G+ GGV+WAMLVARICQL
Sbjct: 186 SLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQL 245
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ +V KFF +++QW WPQPVLLK+ ++ L VW+PR+ DR H MP+ITPA
Sbjct: 246 YPNAVSAVIVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPA 305
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N++ ST+ I+ +EF++G I I W L FF Y+ YL ++A
Sbjct: 306 YPSMCATHNITSSTQKIIMKEFRRGIDIMNQINGNNKTWANLLARHTFFHNYKFYLCIVA 365
Query: 389 SSVSA-EDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY---------------TD 432
++ E+ ++W G++ES++R L+ LE I LAH + + +
Sbjct: 366 ATKGPYEEHIKWSGMVESRLRILVQKLELTEGIELAHPYVKTFEHSFSSNDSEKIQEVIN 425
Query: 433 TTGVIANGSGSPEITA-EGKEEGGENTSPPVSGVASMWFIGLDF---IAANVILNLTYDI 488
T G + + ++T + + + E++S + + FIGL+ L++ Y
Sbjct: 426 TYGTLQGEKLTKDVTQIDPQSKESEDSSDNIKVHLTKLFIGLEIDLNKGGEKKLDIQYPC 485
Query: 489 QHFTNAVH-WQATQSKMMKDGMKIEVRHVK 517
F N WQ+ K+ ++++HVK
Sbjct: 486 SEFFNICKSWQSYDEKL----HSVQIKHVK 511
>gi|449018860|dbj|BAM82262.1| nuclear poly(A) polymerase [Cyanidioschyzon merolae strain 10D]
Length = 561
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/468 (41%), Positives = 279/468 (59%), Gaps = 29/468 (6%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + P +L+ TR L ECL N+ + EE R+ VL LN +V EW++ V+
Sbjct: 11 GVTEPVSTATPTAAELRLTRTLEECLHANNLYPSREEQRQRLNVLGALNAVVVEWVRRVA 70
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK---- 145
+A+ + V E+ G +I+TFGSYRLGV+ GAD+D LCV PR V+R YF ++
Sbjct: 71 LAQRLSEDVVEEHGARIFTFGSYRLGVNGPGADVDTLCVVPRFVERNRYFFGLPDEQGSR 130
Query: 146 ----------LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRD 195
L+ D +L VE A+VPVIK+ F G+++D+L A +AL +IP + ++ D
Sbjct: 131 APTQVVLADMLRQDDRTEELVTVESAYVPVIKIRFMGVDMDLLCAPIALMKIPKNFNILD 190
Query: 196 DMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGG 255
D +L+N+D RSLNG RVTD IL LVP+++ FR LR IK WAK+ GIYSNVLGYLGG
Sbjct: 191 DAVLRNVDDATQRSLNGVRVTDSILELVPDVDTFRTTLRCIKFWAKRRGIYSNVLGYLGG 250
Query: 256 VSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPV----LLKKPDNVNLGFPVWDP 311
V+WAMLVAR+CQLYPNA A+ ++ FF ++SQW+WP+PV +++ VWDP
Sbjct: 251 VAWAMLVARVCQLYPNATAAVVLSAFFRLYSQWQWPKPVKLCPIIRHQHAGLRQLKVWDP 310
Query: 312 RVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM----- 366
+ DR HLMPIITPAYP NST+NV+ ST IM EEF +G+ I D+
Sbjct: 311 -TDPRDRRHLMPIITPAYPSMNSTYNVTHSTLRIMMEEFARGQQICADVLAAAGSDGTGV 369
Query: 367 ----WDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL 422
W++L E +FF +Y+HYL + ++ + +D +W G +ES++R L+ LE P +++
Sbjct: 370 SPRDWERLLEPSDFFARYKHYLQIEITAGNMDDLKKWRGHVESRLRLLVQRLEVLPPVSV 429
Query: 423 AHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWF 470
H PE T V E +EEG + ++ W
Sbjct: 430 -HPWPEADERGTSVFFYFGLRLETDKIAREEGTKRARIDLNSPVESWL 476
>gi|440634435|gb|ELR04354.1| hypothetical protein GMDG_06729 [Geomyces destructans 20631-21]
Length = 598
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/400 (47%), Positives = 263/400 (65%), Gaps = 5/400 (1%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T L+ + P + Q + L E LK N E+ + R E L L + +E+IK+VS
Sbjct: 10 GITAPLSTALPTDSENQASSALIEELKRQNNYESVVDTQKRTEALKALQAITEEFIKQVS 69
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
A+ +P +VA GKI+T+GS+RLGV G+DID L V P+HV R D+F F + L T+
Sbjct: 70 KAQGLPDSVANSASGKIFTYGSFRLGVFGPGSDIDTLVVGPKHVTRDDFFKYFPDLLVTM 129
Query: 150 D---EVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDDMDLRDDMLLKNLDQK 205
+TDL V ++FVP+IK + GI ID++F+R+A L +IP + L+D LL+ LD+
Sbjct: 130 SPPGAITDLTPVVDSFVPIIKFEYAGISIDLIFSRIAVLNQIPQSLTLQDSNLLRGLDEA 189
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+RSLNG RVTD IL LVP FR ALR IKLWA++ IY+N++G+ GGV+WAMLVAR+
Sbjct: 190 DLRSLNGTRVTDAILDLVPQKTIFRTALRGIKLWAQRRAIYANIIGFPGGVAWAMLVARV 249
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A +ST+V KFF + +W+WP PVLL + L VW+PR+ D +HLMPII
Sbjct: 250 CQLYPKATSSTVVLKFFRIMEKWQWPTPVLLTHIASGPLQVKVWNPRIYKHDSFHLMPII 309
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T N++ ST+ I+Q E K+G I++ I +GK W LF FFT+ Y++YL
Sbjct: 310 TPAYPSMCATHNITRSTKEIIQRELKRGGNITDQIMSGKLQWKDLFAKHTFFTEGYKYYL 369
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+I++S + E Q W GL+ESK+R L+ +LE + I LAH
Sbjct: 370 SVISASTTREAQNIWGGLVESKIRLLVLSLEGHDSIALAH 409
>gi|296820828|ref|XP_002849998.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
gi|238837552|gb|EEQ27214.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
Length = 593
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/431 (43%), Positives = 268/431 (62%), Gaps = 24/431 (5%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
PQS+ +G+T L+ + P +L L LK N E E R + L L +
Sbjct: 4 PQSR---QWGITPPLSSALPTPSELAENDALIAELKLQNNFEAPSETEKRKQTLHLLQRV 60
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVH-----------------HKGADI 123
E+IK VS K + + GGKI+T+GSYRLGV+ G+DI
Sbjct: 61 TIEFIKVVSKEKGLSQAAIDVSGGKIFTYGSYRLGVYGPAVMNGDISLMYSLRQFAGSDI 120
Query: 124 DALCVAPRHVDRADYFSSF---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA 180
D L VAP+HV R D+F+ F EK D + + V +AFVP+IK+ GI ID++FA
Sbjct: 121 DTLVVAPKHVMREDFFAHFPTVLEKFAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFA 180
Query: 181 RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA 240
RL + +P ++DL++ LL+ LD++ +R +NG RVTDEIL LVP + FRLALR IKLWA
Sbjct: 181 RLIVPSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWA 240
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPD 300
++ IYSN++G+ GGV+WAMLVAR+CQLYP A S +V KFF + +QW WPQPVLLK +
Sbjct: 241 QRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIE 300
Query: 301 NVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDI 360
+ L VW+P++ DR+HLMPIITPAYP +T N+S+ST+ ++ E ++G + ++I
Sbjct: 301 DGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISMSTKAVILRELRRGGDMVDNI 360
Query: 361 YNGKTMWDKLFETPNFFT-KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH 419
+ G+ W LF +FF+ Y++YL + ++S + E Q W GL+ESK+RHL+G L+R
Sbjct: 361 FVGQRRWSDLFARHSFFSGDYKYYLSINSTSTTKEAQAIWSGLVESKLRHLVGALDRKSS 420
Query: 420 INLAHVNPECY 430
I +AH P+ +
Sbjct: 421 IEIAHPFPKGF 431
>gi|320165027|gb|EFW41926.1| poly(A) polymerase [Capsaspora owczarzaki ATCC 30864]
Length = 698
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/470 (41%), Positives = 282/470 (60%), Gaps = 67/470 (14%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRM------------------ 71
GMT L ++ P+ D++ +R+L + L+ +++ ET+EE +R
Sbjct: 10 GMTPPLLIADPSPRDVELSRQLEQTLRDHDLFETEEEAQTRQLLLCSSDLIDLFSLTVAL 69
Query: 72 ------------------------------EVLSKLNNLVKEWIKEVSIAKN-IPPTVAE 100
VL++L+++VK+W+ +V AKN +PP
Sbjct: 70 GRSTFVALPSSSPVPPPPPPSPLLPMLHSHMVLARLDSIVKQWVIQVLTAKNEMPPDT-- 127
Query: 101 KVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEE 160
+ GGK++TFGSYRLGVH +GADID LC+APR V R D+F S E L+ E ++L V
Sbjct: 128 EPGGKVFTFGSYRLGVHGRGADIDTLCIAPRGVTRDDFFQSLVELLREQSETSELTPVTG 187
Query: 161 AFVPVIKMNFDGIE-----------IDMLFARL-ALKEIPDDMDLRDDMLLKNLDQKCVR 208
AF P+I + F G++ ID+LFA L + + +++++ D+ +L+N D VR
Sbjct: 188 AFTPIITLKFSGVDNRSLASSAPLKIDLLFAELPGVLSVSENLNVMDNAILRNCDMATVR 247
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
S+NG RV + IL+LVP+ +NFR+ALR IKLWA G+YSN LG+LGG++WA+LVAR CQL
Sbjct: 248 SVNGSRVANYILQLVPDRDNFRMALRAIKLWANNRGVYSNKLGFLGGIAWAILVARTCQL 307
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKK-PDNVNLGFPVWDPRVNVADRYHLMPIITP 327
YP ++AST+V +FF VF W WP PV LK ++ +L P W+P +N +D HLMPIITP
Sbjct: 308 YPKSSASTIVARFFRVFHNWSWPTPVWLKAMEEDRSLALPNWNPVINASDARHLMPIITP 367
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP NST NVS+ST +M EEF +G ++ DI GK W LFE NFFT+Y+ Y+ +
Sbjct: 368 AYPSMNSTHNVSMSTLRVMTEEFARGMQVTLDIEVGKVGWPVLFEKNNFFTRYKTYIQIS 427
Query: 388 ASSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAHVNPECY--TDTT 434
A + +D+ +W G +ESK+R + LE P ++ H P+ + TDTT
Sbjct: 428 ARTEENQDEHRQWEGFVESKLRMFLQWLESAPGVDYVHPYPKTFSQTDTT 477
>gi|340514098|gb|EGR44367.1| predicted protein [Trichoderma reesei QM6a]
Length = 620
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/408 (45%), Positives = 266/408 (65%), Gaps = 6/408 (1%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++++ P + + + + L E L+ E+ + R VL L + E++++V
Sbjct: 7 YGVTPPISVTLPTEAENRASDALLEELRRQKTFESPSDTEKRHAVLKSLQEICNEFVRKV 66
Query: 89 SIAKNIPPTVAEK-VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
+ + + K GK++T+GS+RLGV+ G+DID L VAP++V R DYF+ F + L
Sbjct: 67 AREREPKNDILIKNARGKVFTYGSFRLGVYGPGSDIDTLIVAPKYVTREDYFNYFPDLLV 126
Query: 148 TV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMD-LRDDMLLKNLD 203
++ +TDL V++AFVP+IK + GI ID++F+R+ K+I D D L+D LL+ LD
Sbjct: 127 SMAPPGAITDLTVVKDAFVPIIKFEYSGISIDLIFSRIIQKQISPDFDSLKDSSLLRGLD 186
Query: 204 QKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVA 263
+ +RSLNG RVTDEIL LVP FRLALR IKLWA++ +Y+N++G+ GGV+WAMLVA
Sbjct: 187 EAELRSLNGTRVTDEILDLVPEKSTFRLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVA 246
Query: 264 RICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMP 323
R+CQLYP A S +V KFFLV QW+WPQPVLLK D+ L VW+P+V D +HLMP
Sbjct: 247 RVCQLYPKATMSVIVNKFFLVIGQWRWPQPVLLKPIDSGPLPVRVWNPKVYKGDSFHLMP 306
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRH 382
+ITPAYP +TFN++ S+ TI+Q E ++G ISE I GK W LF FFT YR+
Sbjct: 307 VITPAYPSMCATFNITRSSMTIIQRELRRGLEISEQIMVGKRPWSDLFVKHTFFTSGYRY 366
Query: 383 YLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
Y+ +I++S E W G +ESKVR L+ LE++P I LAH + Y
Sbjct: 367 YISVISASKDKEAHKIWSGYVESKVRMLVQKLEQHPSIALAHAFNKGY 414
>gi|345563932|gb|EGX46915.1| hypothetical protein AOL_s00097g341 [Arthrobotrys oligospora ATCC
24927]
Length = 1294
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/504 (40%), Positives = 294/504 (58%), Gaps = 27/504 (5%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
SQ P +G+T A++ S P +++ +L E LK N E+ EE R++VL +L + +
Sbjct: 684 SQPPRQWGVTPAISHSMPTDQEIKVNNDLIEELKAMNSFESAEESQKRVDVLKRLQRITE 743
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
+++K+V +KN GGK++T+GSYRLGV G+DID L VAP+ V R D+F +
Sbjct: 744 DFVKQVYTSKNQNELATNSAGGKVFTYGSYRLGVVGPGSDIDTLVVAPKLVTREDFFKFY 803
Query: 143 FEKLKTVDE------VTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDD 196
LK +++ + +L V +AFVP+IK GI ID++F RL + ++P DM L D
Sbjct: 804 PPLLKALNKPNEPQIIEELAPVPDAFVPIIKFVMSGISIDLIFCRLGVTQVPADMSLEDK 863
Query: 197 MLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
LL+ LD+K +RSLNG RVTDEIL LVP F+ ALR IK+WAK IY NV G+ GGV
Sbjct: 864 NLLRGLDEKELRSLNGTRVTDEILTLVPAPAVFKHALRAIKIWAKCKAIYGNVYGFPGGV 923
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA 316
+WAMLVARICQLYP+A ++ +V KFF + QW WPQPVLLK ++ L VW+PR+ +
Sbjct: 924 AWAMLVARICQLYPSAVSAVIVSKFFRILGQWAWPQPVLLKPIEDGPLNVRVWNPRLYPS 983
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
D+ HLMPIITPAYP ST N++ ST+ + E + I + I GK W +LFE F
Sbjct: 984 DKNHLMPIITPAYPSMCSTHNITPSTKAAILGEMAKAADIVDRIITGKGNWKQLFERHTF 1043
Query: 377 FTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE--------RNPHINLAHVNP 427
FTK Y++YL + AS+ E ++W GL+ESK+RHL+ LE P++
Sbjct: 1044 FTKDYKYYLAVNASAKEQEASVKWSGLVESKIRHLVMKLEMCNDVIASARPYVKPFEQVQ 1103
Query: 428 ECYTDTTGV-IANGSG------SPEITAEGKEEGGENTSPPVSGVA---SMWFIGLDFIA 477
C D IANG + A E GE + +GV + ++IG++ +
Sbjct: 1104 YCKNDEEARKIANGERVENDPPAEAANAATGETAGEVSDQEKNGVPLWITTFYIGVELVP 1163
Query: 478 A-NVILNLTYDIQHFTNAVH-WQA 499
+N+T+ + F H W+
Sbjct: 1164 GWTGAVNITWPAREFYQMCHSWEG 1187
>gi|221486493|gb|EEE24754.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
Length = 795
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/521 (41%), Positives = 305/521 (58%), Gaps = 34/521 (6%)
Query: 26 PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
P +G+T +N+ P + DL R+ EL L+ N+ ET R VL++LN +V +W+
Sbjct: 210 PYAFGVTNPVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWV 269
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
EV + + + A + GGKI+TFGSYRLGV G+DID LCV PRHV R +F + K
Sbjct: 270 VEVGMEQGLDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDAFFKILYAK 329
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMD-LRDDMLLKNLDQ 204
L+ V+ L V +A+ PV+K +FDG+EID+LFARL L IP + L +D++L+++D+
Sbjct: 330 LQQDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDE 389
Query: 205 KCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVAR 264
K RS+NG RV D IL+LVPN E F++ LR +K WAK GIYSNVLGYLGGVSWA+LVAR
Sbjct: 390 KTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVAR 449
Query: 265 ICQLYPNAAASTLVCKFFLVFSQWKWP-QPVLL---KKPDNVNLG-FPVWDPRVNVADRY 319
CQLYPN A S LV +FF V+S W W PVLL K+ L F VW+P+VN+ DR+
Sbjct: 450 CCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRH 509
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGK--TMWDK---LFETP 374
HL+PIITPA+P NST NVS+ST+ ++ EEF K I DI++ K W + L P
Sbjct: 510 HLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIF-DIWDKKKEISWTEALHLVLKP 568
Query: 375 NFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLER---NPHINLAHVNPECYT 431
FT ++H+L L + + +W G +ESKVR L+ LER P N P+
Sbjct: 569 LDFTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEA 628
Query: 432 DTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHF 491
T T +E G E AS + L+F +++L F
Sbjct: 629 AMT------VRPIPCTFSFQEPGWE--------CASSMLVALNFAQQPCVIDLRPAAGEF 674
Query: 492 TNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKK 532
+ ++ Q + + +++ V+H+++ Q LPA++LK+
Sbjct: 675 VDLIN-QWPERAQLDGQIQLRVKHLRRSQ----LPAYVLKQ 710
>gi|237833947|ref|XP_002366271.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
gi|211963935|gb|EEA99130.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
Length = 811
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/521 (41%), Positives = 305/521 (58%), Gaps = 34/521 (6%)
Query: 26 PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
P +G+T +N+ P + DL R+ EL L+ N+ ET R VL++LN +V +W+
Sbjct: 221 PYAFGVTNPVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWV 280
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
EV + + + A + GGKI+TFGSYRLGV G+DID LCV PRHV R +F + K
Sbjct: 281 VEVGMEQGLDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDAFFKILYAK 340
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMD-LRDDMLLKNLDQ 204
L+ V+ L V +A+ PV+K +FDG+EID+LFARL L IP + L +D++L+++D+
Sbjct: 341 LQQDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDE 400
Query: 205 KCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVAR 264
K RS+NG RV D IL+LVPN E F++ LR +K WAK GIYSNVLGYLGGVSWA+LVAR
Sbjct: 401 KTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVAR 460
Query: 265 ICQLYPNAAASTLVCKFFLVFSQWKWP-QPVLL---KKPDNVNLG-FPVWDPRVNVADRY 319
CQLYPN A S LV +FF V+S W W PVLL K+ L F VW+P+VN+ DR+
Sbjct: 461 CCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRH 520
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGK--TMWDK---LFETP 374
HL+PIITPA+P NST NVS+ST+ ++ EEF K I DI++ K W + L P
Sbjct: 521 HLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIF-DIWDKKKEISWTEALHLVLKP 579
Query: 375 NFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLER---NPHINLAHVNPECYT 431
FT ++H+L L + + +W G +ESKVR L+ LER P N P+
Sbjct: 580 LDFTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEA 639
Query: 432 DTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHF 491
T T +E G E AS + L+F +++L F
Sbjct: 640 AMT------VRPIPCTFSFQEPGWE--------CASSMLVALNFAQQPCVIDLRPAAGEF 685
Query: 492 TNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKK 532
+ ++ Q + + +++ V+H+++ Q LPA++LK+
Sbjct: 686 VDLIN-QWPERAQLDGQIQLRVKHLRRSQ----LPAYVLKQ 721
>gi|320583027|gb|EFW97243.1| poly(A) polymerase isozyme [Ogataea parapolymorpha DL-1]
Length = 1547
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/397 (46%), Positives = 262/397 (65%), Gaps = 1/397 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ + P + + + E L+ N E++ E R EVL+ L L +E++ V
Sbjct: 968 YGVTAPISTAGPTAKENELNDAMIEELRNQNSFESESETQKRREVLATLQKLTEEFVYTV 1027
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S KN+ +A GGKI+TFGSYRLGV+ G+DID L V P+HV R D+F+ F E L+
Sbjct: 1028 SRRKNMSEGMARDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTRDDFFTVFEELLRK 1087
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
E+ ++ V +AF+P+IK FDG++ID++ RL + ++ D+ L D+ LL+N+D + +R
Sbjct: 1088 RPELNKIQPVPDAFMPIIKTVFDGVDIDLICGRLDIPQVSLDLTLEDNNLLRNIDDRDLR 1147
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
+LNG RVTD+IL+LVP FR ALRTIKLWA++ IY+N+ G+ GGV+WAMLVARICQL
Sbjct: 1148 ALNGTRVTDQILQLVPQKMVFRHALRTIKLWAQRRAIYANMFGFPGGVAWAMLVARICQL 1207
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA + +V KFF ++ QWKWPQPVLLK ++ L +W+P++ DR H MP+ITPA
Sbjct: 1208 YPNAVGAVIVSKFFQIYLQWKWPQPVLLKPIEDGPLPVRIWNPKLYGQDRLHRMPVITPA 1267
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI- 387
YP +T N++ ST+ I+ +E ++G I DI GK W LF +FF Y+ YL +I
Sbjct: 1268 YPSMCATHNITASTQKIILKEMQRGLEIMNDIQFGKRTWKDLFAKHDFFFAYKFYLTVIT 1327
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
A+ S E L+W G++ESK+R L+ LE I LAH
Sbjct: 1328 ATRDSYEAHLKWSGMVESKLRLLVQKLEVVNGIVLAH 1364
>gi|221508263|gb|EEE33850.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
Length = 778
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/521 (41%), Positives = 305/521 (58%), Gaps = 34/521 (6%)
Query: 26 PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
P +G+T +N+ P + DL R+ EL L+ N+ ET R VL++LN +V +W+
Sbjct: 191 PYAFGVTNPVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWV 250
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
EV + + + A + GGKI+TFGSYRLGV G+DID LCV PRHV R +F + K
Sbjct: 251 VEVGMEQGLDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDAFFKILYAK 310
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMD-LRDDMLLKNLDQ 204
L+ V+ L V +A+ PV+K +FDG+EID+LFARL L IP + L +D++L+++D+
Sbjct: 311 LQQDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDE 370
Query: 205 KCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVAR 264
K RS+NG RV D IL+LVPN E F++ LR +K WAK GIYSNVLGYLGGVSWA+LVAR
Sbjct: 371 KTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVAR 430
Query: 265 ICQLYPNAAASTLVCKFFLVFSQWKWP-QPVLL---KKPDNVNLG-FPVWDPRVNVADRY 319
CQLYPN A S LV +FF V+S W W PVLL K+ L F VW+P+VN+ DR+
Sbjct: 431 CCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRH 490
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGK--TMWDK---LFETP 374
HL+PIITPA+P NST NVS+ST+ ++ EEF K I DI++ K W + L P
Sbjct: 491 HLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIF-DIWDKKKEISWTEALHLVLKP 549
Query: 375 NFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLER---NPHINLAHVNPECYT 431
FT ++H+L L + + +W G +ESKVR L+ LER P N P+
Sbjct: 550 LDFTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEA 609
Query: 432 DTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHF 491
T T +E G E AS + L+F +++L F
Sbjct: 610 AMT------VRPIPCTFSFQEPGWE--------CASSMLVALNFAQQPCVIDLRPAAGEF 655
Query: 492 TNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKK 532
+ ++ Q + + +++ V+H+++ Q LPA++LK+
Sbjct: 656 VDLIN-QWPERAQLDGQIQLRVKHLRRSQ----LPAYVLKQ 691
>gi|296415646|ref|XP_002837497.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633369|emb|CAZ81688.1| unnamed protein product [Tuber melanosporum]
Length = 587
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/399 (46%), Positives = 259/399 (64%), Gaps = 3/399 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++++ P +++R + L E LK E EE R+ VL+ L NL + ++K+V
Sbjct: 9 YGVTPPISVATPTDKEVERNQALIEELKKQGSFEGAEESQKRVLVLNTLQNLTEGFVKKV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
K +P + + GGKI+T+GSYRLGV+ G+DID L V P H+ R D+F++ L+
Sbjct: 69 CANKGMPEHIIKNSGGKIFTYGSYRLGVYAPGSDIDTLLVTPAHITRHDFFATLPAMLQE 128
Query: 149 -VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDDMDLRDDMLLKNLDQKC 206
V DL V +AFVP+IK I ID++FARLA + +P DM L D LL+ D+
Sbjct: 129 LVPPPEDLSMVPDAFVPIIKFKLQSISIDLIFARLANVNSVPKDMALSDKELLRGCDEVN 188
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARIC 266
+R LNG RVTDEIL LVP FR+ALR IKLWA++ IY+NV+G+ GGV+WAMLVARIC
Sbjct: 189 LRCLNGTRVTDEILTLVPKPGVFRMALRGIKLWAQRRAIYANVMGFPGGVAWAMLVARIC 248
Query: 267 QLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIIT 326
QLYP A ++ ++ KFF + + W WPQPVLLK ++ L VW+P++ +DR HLMPIIT
Sbjct: 249 QLYPMAVSAVVISKFFKILAHWTWPQPVLLKGIEDGPLSVRVWNPKIYPSDRGHLMPIIT 308
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYLV 385
PAYP +T N++ ST++I+ E K I + I G WDKLFE +FFT YR+YL
Sbjct: 309 PAYPSMCATHNITKSTKSIIIREMKHAAEIMDGIMVGNLSWDKLFERHSFFTNGYRYYLS 368
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
++A++ + L W GL+ESK+RHL+ LE I LAH
Sbjct: 369 VVAAAKDKDTLLGWSGLVESKLRHLVMKLEILETIKLAH 407
>gi|315043474|ref|XP_003171113.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
gi|311344902|gb|EFR04105.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
Length = 583
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/386 (46%), Positives = 253/386 (65%), Gaps = 4/386 (1%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T L+ + P +L L LK N ET E R + L L + E+IK V
Sbjct: 9 WGITPPLSSALPTPAELTENDALIAELKLQNNFETPSETEKRKQTLHLLQRVTIEFIKVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + + GGKI+T+GSYRLGV+ G+DID L VAP+HV R D+F+ F EK
Sbjct: 69 SKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMREDFFAHFPTVLEK 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
D + + V +AFVP+IK+ GI ID++FARL + +P ++DL++ LL+ LD++
Sbjct: 129 FAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDER 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+
Sbjct: 189 EIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + +QW WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 249 CQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPII 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST++++ E ++G + + I+ G+ W LF +FF+ Y++YL
Sbjct: 309 TPAYPSMCATHNVSMSTKSVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHL 410
+ ++S + E Q W GL+ESK+RHL
Sbjct: 369 SINSTSTTKEAQAIWSGLVESKLRHL 394
>gi|358401751|gb|EHK51049.1| hypothetical protein TRIATDRAFT_288652 [Trichoderma atroviride IMI
206040]
Length = 572
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/551 (38%), Positives = 317/551 (57%), Gaps = 35/551 (6%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
YG+T ++++ P + + + + L + L+ E+ E R +VL L + E++++
Sbjct: 6 VYGVTPPISVNLPTEAEKRASDALKDELRRQKTFESPSETDKRWKVLDSLQLICNEFVRK 65
Query: 88 VSIAKNIPPTVAEK-VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---F 143
V+ K + K GK++T+GS+RLGV G+DID L VAP++V R DYF F
Sbjct: 66 VATEKEPKNEILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTREDYFKYFPDLL 125
Query: 144 EKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI-PDDMDLRDDMLLKNL 202
+ +TDL V +AFVP+IK + I ID++F+R+ K+I PD DL+D LL+ L
Sbjct: 126 VAMAPAGAITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFADLKDSSLLRGL 185
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D+ +RSLNG RVTDEIL LVP F+LALR IKLWA++ +Y+N++G+ GGV+WAMLV
Sbjct: 186 DEAELRSLNGTRVTDEILALVPEEATFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLV 245
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR+CQLYP A S +V KFFLV QW+WPQPVLLK + L VW+P+V D +HLM
Sbjct: 246 ARVCQLYPKAETSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLM 305
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YR 381
P+ITPAYP +TFN++ S+ TI+Q E ++G ISE+I GK W LF FFT+ YR
Sbjct: 306 PVITPAYPSMCATFNITRSSMTIIQRELRRGLEISEEIMVGKRPWSDLFVKHTFFTQGYR 365
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIAN-- 439
+Y+ ++++S + E W G +ESKVR L+ LE++ I LAH + Y D + N
Sbjct: 366 YYISVVSASKNKEAHKVWSGYVESKVRMLVQKLEQHSSIALAHPFNKGY-DRRHLCKNDH 424
Query: 440 -------GSGSPEITAEGKEEGGENTSP-------------PVSGVASMWFIGLDFIAAN 479
GS I EGK + E +P PV + +IG++
Sbjct: 425 EIEQVQEGSLEFVIKDEGKGQTSEEKNPKLEENQDSSAPTSPVEVYTTTHYIGIELEEGA 484
Query: 480 VILNLTYDIQHF-TNAVHWQATQSKMMKDGMKIEVRHVKKKQL-SEYLPAHMLKKDKKTK 537
L+L+Y + F W+ + + ++ + + V+HV+ L + A K KK+
Sbjct: 485 KSLDLSYQVDEFKVLCTSWKKYEDE-LRPLVSLGVQHVRNFNLPDDVFEAGETKPQKKSA 543
Query: 538 SGDQNTSAKKR 548
++ ++KKR
Sbjct: 544 ---KSLASKKR 551
>gi|218195447|gb|EEC77874.1| hypothetical protein OsI_17161 [Oryza sativa Indica Group]
Length = 556
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/542 (38%), Positives = 301/542 (55%), Gaps = 40/542 (7%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
SQ+P + G+ ++L P DL+ T L L+ + E+ EE ++R EVL L +V
Sbjct: 3 SQSPQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESAEETAAREEVLRGLRGVVD 62
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSS 141
W+K ++ + P +A++ + FGSYRLGVH +G+DIDAL V P +VDR D+F +
Sbjct: 63 RWVKRLTRQRGYPDGMADRATALVLPFGSYRLGVHGRGSDIDALVVGPSYVDRDRDFFGA 122
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
L V +L+ V A VPVIKM F G+++D+++A + L +P D+DL +L+
Sbjct: 123 LAAALAETAGVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRG 182
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
LD RSLNG RV DEILRLVP+ FR LR +K WAK G+YSNV G+LGGV WA+L
Sbjct: 183 LDLATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAIL 242
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN----VNLGFPVWDPRVNVAD 317
VAR+C LYPNA+ S L+ +FF VF++WKWP PV+L+ ++ + L PVWDPR N D
Sbjct: 243 VARVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRD 302
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIY---NGKTMWDKLFETP 374
+ HLMPI+TPAYP NS +NVS +T ++ E+ G + ++I +G WDKLF+
Sbjct: 303 KIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPF 362
Query: 375 NFFTKYRHYL-VLIASSVSAEDQL-EWCGLIESKVRHLIGNLERNPH-INLAHVNPECYT 431
NFF Y+ YL V + + ED L EW G +ES++R L +E + + L H++P+ Y
Sbjct: 363 NFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYA 422
Query: 432 DTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLD--FIAANVILNLTYDIQ 489
AE E P S +F+GL + +D++
Sbjct: 423 ----------------AEPHNE------PRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLR 460
Query: 490 HFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRK 549
T + + GM++ V HV++K L Y+ +L+ G + +KR
Sbjct: 461 ATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSYVLRQLLR-----SPGRHDQLKRKRA 515
Query: 550 SD 551
D
Sbjct: 516 DD 517
>gi|408391167|gb|EKJ70549.1| hypothetical protein FPSE_09302 [Fusarium pseudograminearum CS3096]
Length = 711
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 225/635 (35%), Positives = 336/635 (52%), Gaps = 84/635 (13%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T +++ P + +L+++ L E LK E+ E + R EVL+ + + +++
Sbjct: 6 AFGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQIICDAFVRR 65
Query: 88 VSIAKNIPPTV-AEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
V+ K V G+++T+GSYRLGV+ G+DID L VAPR+V R DYF F + L
Sbjct: 66 VAEEKEPKNEVLVRNARGRVFTYGSYRLGVYGPGSDIDTLIVAPRYVTREDYFKYFPDLL 125
Query: 147 KTV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI-PDDMDLRDDMLLKNL 202
++ D +TD+ V +AFVP+IK + GI ID++F+R+ K++ PD DL+D LL+ L
Sbjct: 126 VSMAPKDAITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSGLLRGL 185
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D+ +RSLNG RVTDEIL LVP F+ ALR IKLWA++ +Y+N++G+ GGV+WAMLV
Sbjct: 186 DEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLV 245
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR+CQLYP A + +V KFFLV SQW+WPQPVLLK + L VW+P++ D +HLM
Sbjct: 246 ARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLM 305
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YR 381
P+ITPAYP +TFN++ S+ TI+ E K+ ISE I G W LF +FFT Y+
Sbjct: 306 PVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFFTAGYK 365
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH----------------- 424
+Y+ +I+++ + E W G +ESKVR L+ LE++ I LAH
Sbjct: 366 YYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIALAHPFNKGYERQHRCQNEKE 425
Query: 425 -----------VNPECYTDTTGV------------IANGSGSPEITAEGKEEG----GEN 457
++ E T+ T + NG I AE E G E
Sbjct: 426 IEAVQEGSLDFLSKEDATEPTTIKIEPAVAELPIKTENGEDGKSIKAENGENGLTVKSET 485
Query: 458 T-----------------------SPPVSGVASMW----FIGLDFIAANVILNLTYDIQH 490
T +P VSG +++ +IGL+ A L+L+Y ++
Sbjct: 486 TEDNGPITAEPFNPETSGDTKPSETPVVSGATNVYTTTHYIGLELAAGAKSLDLSYQVEE 545
Query: 491 FTN-AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRK 549
F WQ + +KD + I ++HV+ L + + KK +K + + KKR
Sbjct: 546 FKELCTSWQKYKDD-LKDVVSIGIQHVRNFNLPDDVFEDGEKKPQKKSAAKGAANNKKRG 604
Query: 550 SDQALDELGDKSR-----PRLDSDSNSLSDKVNNI 579
+ S P + S+ LS + N I
Sbjct: 605 PPEVFMHHHANSHCWRRCPAPNGTSSDLSQRTNAI 639
>gi|403213836|emb|CCK68338.1| hypothetical protein KNAG_0A06840 [Kazachstania naganishii CBS
8797]
Length = 576
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 179/408 (43%), Positives = 265/408 (64%), Gaps = 11/408 (2%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
YG+T +++ P + + L + LK N E++ E ++R+++L L L ++++
Sbjct: 6 VYGITGPVSVVGPTAPENKLNDLLIQELKSENSFESEAETATRVKILEVLQALTEKFVYT 65
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS +N+ +A GGK++TFGSYRLGVH G+DID L V P+HV R D+F F + L+
Sbjct: 66 VSKRRNMSDGMARDGGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSRDDFFDVFDKLLR 125
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ V +AFVP+IK+ F G+ ID+L A+L + ++P + L D LL+NLD+K +
Sbjct: 126 ERPELDEIAPVPDAFVPIIKIKFSGVSIDLLCAKLDIAQVPKTLTLSDKNLLRNLDEKDL 185
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y NV G+ GGV+WAMLVARICQ
Sbjct: 186 RALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARICQ 245
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ +FF ++S WKWPQPV+LK ++ L VW+P++ DR H MP+ITP
Sbjct: 246 LYPNACSAVIINRFFKIYSDWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 305
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST++I+ +E ++G I+ DI+ K W+ LF+ +FF KY+ YL +
Sbjct: 306 AYPSMCATHNITESTKSIILQELQRGIQITNDIFTNKKTWNDLFKRHDFFYKYKFYLTIT 365
Query: 388 ASSVSA-----------EDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
AS+ E L+W GL+ESK R L+ LE I +AH
Sbjct: 366 ASTREHTGDDGEKTGGDEQHLKWSGLVESKARLLVMKLEALEGIKVAH 413
>gi|255732153|ref|XP_002551000.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
gi|240131286|gb|EER30846.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
Length = 558
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 179/397 (45%), Positives = 262/397 (65%), Gaps = 1/397 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ + P + L + LK E+++ R+EVL+ LV+E++ V
Sbjct: 7 YGVTDPISTANPTVKENALNDSLIQELKNRGSFESEQATKKRVEVLTLFQKLVQEFVYTV 66
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+ +A+ GGK++TFGSYRLGV+ G+DID L V P+HV R D+FS F + ++
Sbjct: 67 SKSKNMSDGMAKDSGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRDDFFSVFPDIIRK 126
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
E+ ++ V +AFVP+IK+ FDGI ID++ ARL + +P +M L D LLKNLD+K +R
Sbjct: 127 RPELEEIACVPDAFVPIIKLEFDGISIDLIMARLNVPRVPLEMTLDDKNLLKNLDEKDLR 186
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RVTDEIL+LVP F+ ALR IKLWA++ +Y NV G+ GGV+WAMLVARICQL
Sbjct: 187 SLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVYGFPGGVAWAMLVARICQL 246
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ +V KFF ++++W WP+PVLLK ++ L VW+PR+ DR H MP+ITPA
Sbjct: 247 YPNAVSAVIVEKFFSIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPA 306
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N++ ST+ ++ +E +G +I DI G W LF+ +F Y+ YL ++A
Sbjct: 307 YPSMCATHNITSSTQKVILKELSRGSSIMNDINTGNKTWSDLFKRHEYFHAYKFYLCVVA 366
Query: 389 SSV-SAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
++V ++E +W G +ES++R L+ LE I AH
Sbjct: 367 ATVDTSEQHKKWSGFVESRLRQLVLKLEVTDGIEFAH 403
>gi|255549812|ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 712
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 214/564 (37%), Positives = 305/564 (54%), Gaps = 77/564 (13%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ + P + D+QRTREL + L + E+ +E R EVL++++
Sbjct: 17 YGVTKPISTAGPTEADIQRTRELEKLLGDSGLYESKDEAVKREEVLARIDQ--------- 67
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLK 147
VH GADID LCV P +V+R D+F L
Sbjct: 68 ---------------------------VHGPGADIDTLCVGPSYVNREEDFFFVLHNILA 100
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
++EVT+L+ V +A VPV++ FDGI ID+L+A ++L +P+D+D+ D +L ++D+ V
Sbjct: 101 EMEEVTELQPVPDAHVPVMRFKFDGISIDLLYASISLLVVPEDLDISDVSVLYDVDEPTV 160
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRV D+IL+LVPN+E+FR LR +K WAK+ G+YSNV G+LGGV+WA+LVARICQ
Sbjct: 161 RSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARICQ 220
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA S LV +FF V++QW+WP PV+L + LGF +WDPR N DR H MPIITP
Sbjct: 221 LYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSIWDPRKNPRDRTHHMPIITP 280
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP NS++NVS ST +M E+F+ G I E+I KT W LFE FF Y++YL +
Sbjct: 281 AYPCMNSSYNVSTSTLRVMMEQFQYGNKICEEIELIKTQWATLFEPYLFFESYKNYLQVD 340
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEI 446
+ +D W G +ES++R L ++R+ + L H P Y DT
Sbjct: 341 IVATDVDDLRAWKGWVESRLRQLTLMIDRDTYGKLQCHPYPHEYVDT------------- 387
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVIL-NLTYDIQHFTNAVHWQATQSKMM 505
S P + A +F+GL +I +DI+ +
Sbjct: 388 ------------SKPCAHCA--FFMGLQRKQGEMIQEGQQFDIRGTVDEFRNSINMYMFW 433
Query: 506 KDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPR- 564
K GM+I V HV++KQ+ Y+ ++ + + Q S K D D G+ S R
Sbjct: 434 KPGMEIYVSHVRRKQIPSYVFPDGYRRARHPRVTAQQQSDKTCCGDS--DAYGNGSSERG 491
Query: 565 ----LDSDS----NSLSDKVNNIS 580
DSD N + +K N+IS
Sbjct: 492 HKRKKDSDEIDVKNDMPEKRNSIS 515
>gi|429852211|gb|ELA27357.1| poly polymerase [Colletotrichum gloeosporioides Nara gc5]
Length = 632
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 185/413 (44%), Positives = 269/413 (65%), Gaps = 10/413 (2%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEE----LSSRMEVLSKLNNLVKE 83
YG+T ++ + P +L+ Q L E LK N ET + SR +V++ L + E
Sbjct: 7 AYGVTPPISTALPTELENQAKEALIEELKKQNTFETRQSNPFLGESRYQVINHLQQICDE 66
Query: 84 WIKEVSIAKNIP-PTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
++K V+ + + G+I+T+GS+RLGV+ G+DID L VAP++V R+DYF F
Sbjct: 67 FVKRVARKREEGNEALIRDARGQIFTYGSFRLGVYGPGSDIDTLVVAPKYVTRSDYFEIF 126
Query: 143 FEKLKTV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDDMDLRDDML 198
LK + D +TD+ VE+AFVP+IK F GI ID++F+R+A LK++P + +++D L
Sbjct: 127 PGLLKEMAPSDAITDMAVVEDAFVPIIKFEFFGISIDLIFSRIAMLKQLPKEFNVQDSGL 186
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L+ LD+ +RSLNG RVTDEIL LVP F+LALR IKLWA++ IY+N++G+ GGV+W
Sbjct: 187 LRGLDEAELRSLNGTRVTDEILSLVPEEATFKLALRAIKLWAQRRAIYANIMGFPGGVAW 246
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR+CQLYP AA+S +V KFF + +W WPQPVLLK + L VW+P+V D+
Sbjct: 247 AMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKNVEGGPLQVRVWNPKVYKGDQ 306
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
+HLMP+ITPAYP +T+N++ S T++Q+E +G I+++I GK W LF FFT
Sbjct: 307 FHLMPVITPAYPSMCATYNITRSAMTVIQQELTRGCEITDNIMVGKNPWSDLFVKHTFFT 366
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ Y++Y+ +I +S E W G +ESKVR L+ LE++ I LAH + Y
Sbjct: 367 QGYKYYISVITASTDKEAHKIWSGYVESKVRVLVQGLEQHQSIALAHAFNKGY 419
>gi|9453842|dbj|BAB03277.1| poly A polymerase [Drosophila melanogaster]
Length = 255
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 179/253 (70%), Positives = 208/253 (82%), Gaps = 4/253 (1%)
Query: 8 NSMQTSKPHQ--DGKPQSQAPVT--YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSET 63
NS T + H +G S P GMT+A++L+ P DLQRT EL L+PYNV E+
Sbjct: 3 NSEPTHRQHHQHNGNSTSGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFES 62
Query: 64 DEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADI 123
+EL+ RME+L+KLN LVK+W+KE+S++KN+P + AEK+GGKIYTFGSYRLGVHHKGADI
Sbjct: 63 QDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADI 122
Query: 124 DALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
DALCVAPR+++R DYF SFFE LK EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+
Sbjct: 123 DALCVAPRNIERTDYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLS 182
Query: 184 LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
LKEIPDD DLRDD LL+NLD + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKH
Sbjct: 183 LKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKH 242
Query: 244 GIYSNVLGYLGGV 256
GIYSN LGY GGV
Sbjct: 243 GIYSNSLGYFGGV 255
>gi|239835858|gb|ACS29269.1| pap1 [Meyerozyma guilliermondii]
Length = 564
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 178/407 (43%), Positives = 267/407 (65%), Gaps = 1/407 (0%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++ + P + L LK E+++ R+E+L+ L +V+E++
Sbjct: 5 TYGVTAPISTANPTPKENALNDSLIAELKARGSFESEQATRKRVEILALLQKMVQEFVYT 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS KN+ +A+ GGKI+TFGSYRLGV+ G+DID L V P+HV R D+F+ F + ++
Sbjct: 65 VSKKKNMSDGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLIVVPKHVVREDFFTIFDQMIR 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ AV +AFVP+I + F GI ID++FARL + +P DM L D+ LLKN+D+ +
Sbjct: 125 QRPELEEITAVPDAFVPIIMIEFSGISIDLIFARLNVSRVPLDMTLEDNNLLKNIDENDM 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTD+IL+LVP + F+ ALR IKLWA++ +Y N+ G+ GGV+WAMLVARICQ
Sbjct: 185 RALNGTRVTDQILQLVPKVTVFKHALRCIKLWAQQRAVYGNMFGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ +V KFF ++++W WPQPVLLK ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHKMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ ++ E ++G + I W LF+ +FF +Y+ YL +I
Sbjct: 305 AYPSMCATHNINSSTQKVIMNELERGSELMAQISLNNKTWADLFQRHDFFHRYKFYLCII 364
Query: 388 ASSVSA-EDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDT 433
A++ E+ +W G++ESK+R LI LE I LAH + ++D+
Sbjct: 365 AATEGTNEEHSKWSGMVESKLRILIQKLELTDGIALAHPYVKDFSDS 411
>gi|396080920|gb|AFN82540.1| poly (A) polymerase type 1 [Encephalitozoon romaleae SJ-2008]
Length = 505
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 186/423 (43%), Positives = 272/423 (64%), Gaps = 8/423 (1%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
S+ +G+T L++ + D++ + E+ L+ E DEE +R VL KLN +VK
Sbjct: 4 SERNYKHGVTGPLSMKESTEEDVKLSEEMDMYLQERGFFEDDEEGQTRERVLGKLNFMVK 63
Query: 83 EWIKEVSIAKNIPPTVAEKV-GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
E++ +AKN EK GGKI+TFGSYRLGVH KG DIDALC+ PRHV R D+F+
Sbjct: 64 EFV--ARMAKNKGNGDGEKAYGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTRNDFFTY 121
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F+E+LK + + +E+AFVP+IK F GI ID++FARL + + D ++L +D LLK+
Sbjct: 122 FYEELKGDPNIKGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKS 181
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D+KC+ SLNG RVTDE+L LVPN++ F ALR IK WAK+ +Y N GY GGV++++
Sbjct: 182 MDEKCILSLNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLC 241
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR+CQLYPNA++ T+VCKFF +FS WKWP PV+L+ ++N VWDP+V +D+YH
Sbjct: 242 VARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHR 301
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MP+ITPAYP +T NVS ST+ ++ EF + I ++ K + ++FE +FF +Y+
Sbjct: 302 MPVITPAYPSMCATHNVSNSTQHVITMEFSRAHEILSNL--EKNDFRRIFELSDFFGRYK 359
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY---TDTTGVIA 438
++ ++A S E +W G +ES++R L E I A P+ + ++ G I
Sbjct: 360 LFVEVLAMSTLEEGFTKWEGYVESRIRILASKFEAVDDILYAIPFPKAFRVLEESIGKIK 419
Query: 439 NGS 441
G+
Sbjct: 420 PGA 422
>gi|357513525|ref|XP_003627051.1| Poly(A) polymerase [Medicago truncatula]
gi|355521073|gb|AET01527.1| Poly(A) polymerase [Medicago truncatula]
Length = 633
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 188/444 (42%), Positives = 262/444 (59%), Gaps = 30/444 (6%)
Query: 98 VAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKTVDEVTDLR 156
+ E I TFGSYRLGVH GAD+D LC+ P +V+R D+F +F + L ++DEVT+L+
Sbjct: 1 MVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTFHDILASMDEVTELQ 60
Query: 157 AVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVT 216
V +A VPV+K FDGI ID+L+A ++ +P+++D+ D +L N+D+ VRSLNGCRV
Sbjct: 61 PVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVRSLNGCRVA 120
Query: 217 DEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST 276
D+IL+LVPNIE FR LR +K WAK+ G+YSNV G+LGGV+WA+LVAR+CQLYPNA S
Sbjct: 121 DQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM 180
Query: 277 LVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTF 336
LV +FF V++QW+WP PV+L + LGF VW P N DR HLMPIITPAYP NS++
Sbjct: 181 LVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDRSHLMPIITPAYPCMNSSY 240
Query: 337 NVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQ 396
NVS ST +M E+F+ G I EDI K W LF FF Y+++L + + +D
Sbjct: 241 NVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFEGYKNFLQIDVVAADVDDL 300
Query: 397 LEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEITAEGKEEGG 455
W G +ES++R L +ER+ L H P Y D T ++
Sbjct: 301 RAWKGWVESRLRQLTLMIERDTIGKLQCHPYPREYIDDTRKCSH---------------- 344
Query: 456 ENTSPPVSGVASMWFIGLDFIAANVIL-NLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
S +F+GL V+ +DI+ A K GM I V
Sbjct: 345 -----------SAFFMGLQRKQGEVVQEGQQFDIRGTVEAFRHSINMYMFWKPGMDIHVS 393
Query: 515 HVKKKQLSEYLPAHMLKKDKKTKS 538
H++++Q+ Y+ K+ + ++S
Sbjct: 394 HIRRRQIPCYVFPDGFKRSRPSRS 417
>gi|242074144|ref|XP_002447008.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
gi|241938191|gb|EES11336.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
Length = 548
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 204/532 (38%), Positives = 296/532 (55%), Gaps = 54/532 (10%)
Query: 9 SMQTSKPHQD--GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEE 66
+M +S+P Q G+P ++L P DL+ T EL + L+ + E+ +E
Sbjct: 2 AMASSQPKQQMFGEP-------------ISLVGPTPADLEATAELEKVLREAGMYESPQE 48
Query: 67 LSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDAL 126
+ R EVL L +V W+K++++ P + ++ + FGSYRLGVH G+DIDAL
Sbjct: 49 SAVRAEVLRDLQGIVDRWVKQLTLKHGYPDAMVDEATALLLPFGSYRLGVHGGGSDIDAL 108
Query: 127 CVAPRHVDR-ADYFSSFFEKLKTVDE-VTDLRAVEEAFVPVIKMNFDGIEIDMLFARLAL 184
V P VDR D+F L E VTDL+ V A VPV+K+ F G+++D+++A + L
Sbjct: 109 VVGPSFVDRDQDFFGVLAGALAEATEAVTDLQPVPGAHVPVMKLRFRGVQVDLVYASVNL 168
Query: 185 KEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHG 244
+P D+DL D +L+ LD RS+NG RV DEILRLVP+ FR ALR +KLWAK G
Sbjct: 169 PVVPRDLDLSDRAVLRGLDHVTARSMNGVRVADEILRLVPDAAAFRTALRCVKLWAKARG 228
Query: 245 IYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN- 303
+YSNV G+LGGV+WA+LVAR+CQLYPNAA S LV +FF V SQWKWP PV+L ++ +
Sbjct: 229 VYSNVSGFLGGVAWAILVARVCQLYPNAAPSMLVSRFFKVLSQWKWPTPVMLCDIEHDDE 288
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDI-YN 362
LG PVWD R N DR HLMP+ITPAYP N T+NVS +T+ I++E+ + G ++I
Sbjct: 289 LGLPVWDGRRNPRDRTHLMPVITPAYPCMNCTYNVSQATQRIIKEQIQAGHVACQEIAAG 348
Query: 363 GKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQL-EWCGLIESKVRHLIGNLERNPHIN 421
G W LF+ FF ++ YL + A+ E++L EW G +ES++R L+ +ER+
Sbjct: 349 GDRGWGALFQPFPFFRTHKSYLQVDATVAGGEEELREWKGWVESRLRQLVAKVERDTFGE 408
Query: 422 -LAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLD------ 474
L H NP Y + P AS +F+GL
Sbjct: 409 LLCHQNPRAY--------------------------DAEPHGLRCASSFFVGLSKPQQQR 442
Query: 475 -FIAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYL 525
+ +D++ + + + G+++ V+HV++K L Y+
Sbjct: 443 QQPSPPQGQQPQFDLRATADEFLQDVYTYRFWRPGLELAVKHVRRKDLPPYV 494
>gi|324975490|gb|ADY62673.1| PAPa [Candida orthopsilosis]
Length = 372
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 175/365 (47%), Positives = 253/365 (69%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++L+ P D + L + LK E++ R+EVL+ L L ++++ E
Sbjct: 5 TYGVTPPISLTDPTSKDKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDFVYE 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS+ KN+ +A+ GGKI+TFGSYRLGV+ +DIDAL V PRHV R D+F+ F + L+
Sbjct: 65 VSLRKNMTQGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTREDFFTVFEKILR 124
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
E+ ++ +V+EAFVP+IK+ F GI ID+LFA+L + +P D+ L D LLKN+D+K +
Sbjct: 125 GRPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDM 184
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNG RVTDEILRLVP F+ ALR IK+WA++ +Y+NV G+ GGV+WAMLVARICQ
Sbjct: 185 RALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQ 244
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA ++ ++ KFF ++SQW WPQPVLLK+ ++ L VW+PR+ DR H MP+ITP
Sbjct: 245 LYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITP 304
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP +T N++ ST+ I+ EF +G I +I+ G+ +W L E +FF +Y+ YL ++
Sbjct: 305 AYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCVV 364
Query: 388 ASSVS 392
A++ S
Sbjct: 365 AATKS 369
>gi|342870120|gb|EGU73417.1| hypothetical protein FOXB_16055 [Fusarium oxysporum Fo5176]
Length = 635
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 214/578 (37%), Positives = 310/578 (53%), Gaps = 90/578 (15%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T +++ P + +L+++ L E LK E+ E + R EVL+ + + +++ V
Sbjct: 7 YGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQTICDAFVRRV 66
Query: 89 SIAKNIPPTV-AEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
+ K V GK++T+GSYRLGV+ G+DID L VAP++V R DYF F + L
Sbjct: 67 AQEKEPKNEVLIRNARGKVFTYGSYRLGVYGPGSDIDTLIVAPKYVTREDYFKFFPDLLL 126
Query: 148 TV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI-PDDMDLRDDMLLKNLD 203
++ D +TD+ V +AFVP+IK + GI ID++F+R+ K++ PD DL+D LL+ LD
Sbjct: 127 SMAPKDAITDMAVVTDAFVPIIKFEYSGISIDLIFSRVIQKQLSPDFKDLKDSGLLRGLD 186
Query: 204 QKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVA 263
+ +RSLNG RVTDEIL LVP F+ ALR IKLWA++ +Y+N++G+ GGV+WAMLVA
Sbjct: 187 EAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLVA 246
Query: 264 RICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMP 323
R+CQLYP A S +V KFFLV SQW+WPQPVLLK + L +W+P++ D YHLMP
Sbjct: 247 RVCQLYPKATFSVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRIWNPKLYKGDTYHLMP 306
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRH 382
+ITPAYP +TFN++ S+ I+ E K+ ISE I GK W LF FFT Y++
Sbjct: 307 VITPAYPSMCATFNITRSSMAIINRELKRALQISESIMVGKRPWSDLFVKHTFFTAGYKY 366
Query: 383 YLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHV------------NPE-- 428
Y+ + +++ + E W G +ESKVR L+ LE++ I LAH N E
Sbjct: 367 YISVTSAAKTKEAHTIWSGYVESKVRMLVQKLEQHQSIALAHAFNKGYERQHRCHNQEEI 426
Query: 429 -----------CYTDTTGVIA--------------------------NGSGSPEITAEGK 451
C DT A NG G ++ E
Sbjct: 427 EAVQEGSLDYLCKEDTEQTTAVKIEPAVAELPIKAENGENGQLITSENGRGDEQVKTENG 486
Query: 452 EEG-----------GENTSPPV----------------SGVASMW----FIGLDFIAANV 480
E G G T+ PV SG + ++ +IGL+ +
Sbjct: 487 ENGRVVKPEPTEETGPITAVPVKPETSDDSKPTDTATASGPSDIYTTTHYIGLELASGAK 546
Query: 481 ILNLTYDIQHFTN-AVHWQATQSKMMKDGMKIEVRHVK 517
L+L+Y + F WQ + +KD + I V+HV+
Sbjct: 547 SLDLSYQVDEFKELCTSWQKYKDD-LKDDVSIGVQHVR 583
>gi|344231415|gb|EGV63297.1| Poly(A) polymerase PAPalpha [Candida tenuis ATCC 10573]
Length = 560
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 176/406 (43%), Positives = 266/406 (65%), Gaps = 1/406 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ P+ ++ +L LK E+++ R+E+L+ LV+E++ +V
Sbjct: 6 FGVTPPISTDNPSPKEITLNDQLIAELKARGSFESEQATRKRVEILNLFQKLVQEFVHKV 65
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+ +A+ GGKI+TFGSYRLGV+ G+DID L V P+HV R D+FS F ++
Sbjct: 66 SKSKNMSEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTREDFFSVFESIVRE 125
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
E+ ++ +V +AFVP+IK+ FDGI ID++ A L + ++P +M L D LL+NLD++ +R
Sbjct: 126 RPELEEITSVPDAFVPIIKIEFDGISIDLICATLNVPQVPLNMTLDDKNLLRNLDERDMR 185
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
+LNG RVTDEIL+LVP F+ ALR IK+WA+ +Y NV G+ GGV+WAM+VARICQL
Sbjct: 186 ALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQARAVYGNVFGFPGGVAWAMMVARICQL 245
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA + +V KFF ++++W WPQPVLLK ++ L VW+PR+ DR H MPIITPA
Sbjct: 246 YPNAVGAVIVDKFFNIYTKWNWPQPVLLKPIEDGPLQVKVWNPRLYTNDRNHRMPIITPA 305
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL-VLI 387
YP +T N++ ST+ ++ E +G I DI GK W LF+ +FF +Y+ YL +++
Sbjct: 306 YPSMCATHNITSSTQKVILSELVKGVDIVGDIKLGKRTWSDLFQRHDFFFRYKFYLCIVV 365
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDT 433
+ + E+ +W G +ESK+R L+ LE I +AH + + D+
Sbjct: 366 GTKANEEEHSKWSGFVESKLRLLVQKLEATSGIEIAHPYVKDFNDS 411
>gi|46122023|ref|XP_385565.1| hypothetical protein FG05389.1 [Gibberella zeae PH-1]
Length = 624
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 180/403 (44%), Positives = 262/403 (65%), Gaps = 6/403 (1%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+G+T +++ P + +L+++ L E LK E+ E + R EVL+ + + +++
Sbjct: 6 AFGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQIICDAFVRR 65
Query: 88 VSIAKNIPPTV-AEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
V+ K V G+++T+GSYRLGV+ G+DID L VAPR+V R DYF F + L
Sbjct: 66 VAEEKEPKNEVLVRNARGRVFTYGSYRLGVYGPGSDIDTLIVAPRYVTREDYFKYFPDLL 125
Query: 147 KTV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI-PDDMDLRDDMLLKNL 202
++ D +TD+ V +AFVP+IK + GI ID++F+R+ K++ PD DL+D LL+ L
Sbjct: 126 VSMAPKDAITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSGLLRGL 185
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D+ +RSLNG RVTDEIL LVP F+ ALR IKLWA++ +Y+N++G+ GGV+WAMLV
Sbjct: 186 DEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLV 245
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR+CQLYP A + +V KFFLV SQW+WPQPVLLK + L VW+P++ D +HLM
Sbjct: 246 ARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLM 305
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YR 381
P+ITPAYP +TFN++ S+ TI+ E K+ ISE I G W LF +FFT Y+
Sbjct: 306 PVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFFTAGYK 365
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+Y+ +I+++ + E W G +ESKVR L+ LE++ I LAH
Sbjct: 366 YYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIALAH 408
>gi|407919057|gb|EKG12314.1| hypothetical protein MPH_10619 [Macrophomina phaseolina MS6]
Length = 590
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 171/409 (41%), Positives = 263/409 (64%), Gaps = 4/409 (0%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
Q+ +G+T ++ +PP +L L + L+ N E EE R L L V+
Sbjct: 3 GQSNRRWGVTDPISRAPPTDAELALDATLLDELRSQNTFEAPEETEKRGAALQTLQKAVE 62
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
E+++ V K + P+V + GGKI TFGSYRLGV+ G+DID L +AP+HV R D+F+ F
Sbjct: 63 EFVRHVGQVKGLAPSVIDNAGGKICTFGSYRLGVYGPGSDIDTLVLAPKHVTRDDFFAHF 122
Query: 143 ---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
E++ + V +AF P+IKM+F GI+ID++FARLA+ +P D+DL+D+ LL
Sbjct: 123 INVLERVAPSGAIEKFSPVPDAFTPIIKMDFMGIDIDLIFARLAIASVPLDLDLKDNSLL 182
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+ LD+ +RS+NG RVTDE+L LVP + FR R +KLWA++ IY+N++G+ GG++WA
Sbjct: 183 RGLDETDLRSVNGTRVTDEVLSLVPQPKIFRQVTRAVKLWAQRRAIYANIVGFPGGIAWA 242
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
M+VARICQLYP A A+ ++ +FF + S W WP+P++LK+ ++ L VW+P++ D+
Sbjct: 243 MMVARICQLYPMACAAVVLGRFFYLMSTWPWPRPIMLKEIEDGPLQVRVWNPQIYPGDKR 302
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP +T N++ ST+ +++ E + I+ DI + K W LF+ FFT+
Sbjct: 303 HLMPIITPAYPSMCATHNITHSTQKVIKRELLRASQITSDILSEKRRWRDLFDRHTFFTQ 362
Query: 380 -YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNP 427
+++YL ++A+S E Q W +ESKVR L+G +E++P ++ P
Sbjct: 363 DFKYYLSIVAASHDKEAQDNWSSSVESKVRKLVGLIEQSPAEDVELAQP 411
>gi|320586365|gb|EFW99044.1| pap-like poly(A) polymerase [Grosmannia clavigera kw1407]
Length = 596
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 202/548 (36%), Positives = 312/548 (56%), Gaps = 32/548 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T L+ P + ++T L E L+ E+ E R +VL L + ++K V
Sbjct: 7 YGVTPPLSTEMPTEEQRRQTDALLEELRQQGTFESTAETQKRFKVLESLRMVADAFVKRV 66
Query: 89 SIAKNIP-PTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
+ K PT+ KI+T+GS+RLGV+ G+DID L VAP++V R DYF+ F E L+
Sbjct: 67 AKEKAPDNPTLFRDACAKIFTYGSFRLGVYMPGSDIDTLVVAPKYVSREDYFNYFPEMLQ 126
Query: 148 TV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDD--MDLRDDMLLKNL 202
+ +TDL VE+AFVP+IK ++GI ID++F+R+ L ++P D L+D LL+ L
Sbjct: 127 AMTPPGSITDLTPVEDAFVPIIKFEYNGISIDLIFSRVLLTQLPSDDKWGLKDSNLLRGL 186
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D+ +RS+NG RVTDEIL LVP FR ALR IKLWA++ IY+N++G+ GGV+WAM+V
Sbjct: 187 DEAELRSVNGTRVTDEILSLVPEQRTFRDALRAIKLWAQRRAIYANIVGFPGGVAWAMMV 246
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR+CQLYP A + +V KFF + +W WP PVLLK ++ L VW+P+V D++H+M
Sbjct: 247 ARVCQLYPKATGAVIVSKFFGIILRWPWPNPVLLKPIEDGPLPVRVWNPKVYRGDQFHIM 306
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YR 381
PIITPAYP +T+N+S S+ +I++ E ++ IS+ I +G+ W LF FFT Y+
Sbjct: 307 PIITPAYPSMCATYNISQSSLSIIKRELERASEISQMIISGRQQWKDLFVKHTFFTSDYK 366
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDT-------- 433
+Y+ +I++S + Q W G +ESKVR L+ LER+ I LA + Y T
Sbjct: 367 YYISVISASTEKDAQNTWSGFVESKVRVLVQGLERHESIALARAFNKGYERTHMCKNQAD 426
Query: 434 TGVIANGSGSPEI--TAEGKEEGGENTSPPVSGVAS---------MWFIGLDFIAANVIL 482
+ NGS + + E + G + + P S +IG++ + L
Sbjct: 427 IDAVQNGSLDFMVHKSDEARTGDGADGAAPKDAANSADAIEVFTLTHYIGIELVEGAKSL 486
Query: 483 NLTYDIQHFTN-AVHWQATQSKMMKDGMKIEVRHVKKKQLSE--YLPAHM--LKKDKKTK 537
+L++ + F W + K + D + ++HV+ L + + P + ++ K +
Sbjct: 487 DLSFQVDEFKELCFGWDKYKGK-LSDVATLSIQHVRNVTLPDDVFEPGEVKPVRPTKGLR 545
Query: 538 SGDQNTSA 545
G +N +A
Sbjct: 546 QGRRNPAA 553
>gi|119620437|gb|EAX00032.1| poly(A) polymerase gamma, isoform CRA_d [Homo sapiens]
Length = 430
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 188/351 (53%), Positives = 233/351 (66%), Gaps = 31/351 (8%)
Query: 249 VLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPV 308
+LG+LGGVSWAMLVAR CQLYPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PV
Sbjct: 1 MLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPV 60
Query: 309 WDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWD 368
WDPRVN +DRYHLMPIITPAYPQQNST+NVS STRT+M EEFKQG ++++I GK+ W
Sbjct: 61 WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWS 120
Query: 369 KLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE 428
KL E PNFF KYRHY+VL AS+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+
Sbjct: 121 KLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQ 180
Query: 429 CYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNL 484
+ KE +N SMWF+G+ F A +V ++L
Sbjct: 181 SFPG-----------------NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDL 217
Query: 485 TYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTS 544
TYDIQ FT+ V+ QA M+K+GMKIE HVKKKQL YLPA +L+K KK D N S
Sbjct: 218 TYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRS 277
Query: 545 AKKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNS 595
+ +S + + R D+D+ + N+ ++ D S TE NS
Sbjct: 278 SGGLQSKRLSLDSSCLDSSR-DTDNGT---PFNSPASKSDSPSVGETERNS 324
>gi|346972005|gb|EGY15457.1| Poly(A) polymerase pla1 [Verticillium dahliae VdLs.17]
Length = 604
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 208/577 (36%), Positives = 315/577 (54%), Gaps = 61/577 (10%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + P + + + + E LK E+ E R +VL +L + E++K+V+
Sbjct: 9 GVTPPISTALPTEAEHATNKTMLEELKQQKTFESPAETQKRHQVLEQLQTICDEFVKQVA 68
Query: 90 IAKN-IPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
+ + + G+I+T+GS+RLGV+ G+DID L V P++V R DYF F +K
Sbjct: 69 RKREEGSEALIKDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTRDDYFEIFPGLLQK 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDD--MDLRDDMLLKNL 202
+ D +TDL V +AFVP+IK F GI ID++F+R+A LK++P D L D LL+ L
Sbjct: 129 MTPADAITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDPQWSLADSNLLRGL 188
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D++ +RSLNG RVTDEI+ LVP FRLALR IKLWA++ IY+N++G+ GGV+WAMLV
Sbjct: 189 DERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGVAWAMLV 248
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR+CQLYP A +S +V KFF + +W WPQPVLLK + L VW+P++ D++HLM
Sbjct: 249 ARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLM 308
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YR 381
PIITPAYP +TFN++ S T++Q E ++G I++++ K W LF FFT Y+
Sbjct: 309 PIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTFFTSGYK 368
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHV---------------- 425
+Y+ ++ +S + E W G +ESKVR L+ LE++ I +AH
Sbjct: 369 YYISVVTTSTTKEAHKIWSGYVESKVRVLVQGLEQHQSIAIAHAFNKGYDRRHVCHNETE 428
Query: 426 ---------------------NPECY-TDTTGVIA------NGSGSPEITAEGKEEGGEN 457
NPE T G +A +G+ I A G EG E
Sbjct: 429 LSQVQEGSLQYLAGQETIETPNPEIADAKTEGGLALDDLPVDGATETGIEANGNGEGVEE 488
Query: 458 TSP--PVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAV-HWQATQSKMMKDGMKIEVR 514
P + +IGL+ L+L+Y + F W+ +K+ + V+
Sbjct: 489 EVQIWPTDVFTTTHYIGLELGEGAKSLDLSYQVDSFKQLCGQWEKYSAKL----NHLTVQ 544
Query: 515 HVKKKQLSEYL--PAHMLKKDKKTKSGDQNTSAKKRK 549
HV+ L + L P + ++ ++ N SA+ +K
Sbjct: 545 HVRNFNLPDDLFEPGEKKPQKQQKRAAGANGSAQTKK 581
>gi|303388385|ref|XP_003072427.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
gi|303301567|gb|ADM11067.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
Length = 505
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 180/409 (44%), Positives = 262/409 (64%), Gaps = 5/409 (1%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
S+ YG+T L++ + +++ + E+ L+ E D+E +R VL KLN +V+
Sbjct: 4 SERNYKYGVTGPLSMKESTEKEMKLSEEMDMYLQERGFFEDDKEGQTRERVLGKLNFMVR 63
Query: 83 EWIKEVSIAKNIPPTVAEKV-GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
E++ + K EK GGKI+TFGSYRLGVH KG DIDALC+ PRHV R D+F+
Sbjct: 64 EFV--ARMGKGRGSGDGEKAYGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTRNDFFTH 121
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F+E+LK + ++ +E+AFVP+IK F GI ID++FARL + + D ++L +D LLK+
Sbjct: 122 FYEELKGDPNIKEVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKS 181
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D+KC+ SLNG RVTDE+L LVPN+ F ALR IK WAK+ +Y N GY GGV++++
Sbjct: 182 MDEKCILSLNGSRVTDEMLNLVPNVNTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLC 241
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR+CQLYPNA++ ++VCKFF +FS WKWP PV+L+ ++N VWDP+V +D+YH
Sbjct: 242 VARVCQLYPNASSFSIVCKFFELFSSWKWPTPVVLRPVVDLNYNLKVWDPKVYPSDKYHR 301
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MP+ITPAYP +T NVS ST+ ++ EF + I K + K+F+ +FF++Y+
Sbjct: 302 MPVITPAYPSMCATHNVSNSTQHVISMEFARAHEILSS--PEKNDFRKIFDLSDFFSRYK 359
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ ++A S E +W G +ESKVR L E I A P+ +
Sbjct: 360 LFAEILAMSTEEEGFPKWEGYVESKVRILASKFEAVDDILYAIPFPKAF 408
>gi|302409142|ref|XP_003002405.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
gi|261358438|gb|EEY20866.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
Length = 575
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 211/559 (37%), Positives = 317/559 (56%), Gaps = 45/559 (8%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + P + + + E LK E+ E R +VL +L + E++K+V+
Sbjct: 9 GVTPPISTALPTDAEHATNKTMLEELKQQKTFESPAETQKRHQVLEQLQTICDEFVKQVA 68
Query: 90 IAKN-IPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
+ + + G+I+T+GS+RLGV+ G+DID L V P++V R DYF F +K
Sbjct: 69 RKREEGSEALIKDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTRDDYFEIFPGLLQK 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDD--MDLRDDMLLKNL 202
+ D +TDL V +AFVP+IK F GI ID++F+R+A LK++P D L D LL+ L
Sbjct: 129 MTPADAITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDPQWSLADSNLLRGL 188
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D++ +RSLNG RVTDEI+ LVP FRLALR IKLWA++ IY+N++G+ GGV+WAMLV
Sbjct: 189 DERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGVAWAMLV 248
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR+CQLYP A +S +V KFF + +W WPQPVLLK + L VW+P++ D++HLM
Sbjct: 249 ARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLM 308
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YR 381
PIITPAYP +TFN++ S T++Q E ++G I++++ K W LF FFT Y+
Sbjct: 309 PIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTFFTSGYK 368
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLER----------NPHINLAHVN----- 426
+Y+ ++ +S + E W G +ESKV+ G+L+ NP I +A
Sbjct: 369 YYISVVTTSTTKEAHKIWSGYVESKVQE--GSLQYLAGQETTETPNPEIVVAKTEGGLAL 426
Query: 427 ---PECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILN 483
P T TG ANG+G EG EE E + P + + +IGL+ L+
Sbjct: 427 DGLPLDGTTETGTEANGTG------EGVEE--EVQTWPTNVFTTTHYIGLELGEGAKSLD 478
Query: 484 LTYDIQHFTNAV-HWQATQSKMMKDGMKIEVRHVKKKQLSEYL--PAHMLKKDKKTKSGD 540
L+Y + F W+ +K+ + V+HV+ L + L P + ++ ++
Sbjct: 479 LSYQVDSFKQLCGQWEKYSAKL----NHLTVQHVRNFNLPDDLFEPGEKKPQKQQKRAAG 534
Query: 541 QNTSA--KKRKSDQALDEL 557
N SA KKR + + L L
Sbjct: 535 ANGSAQTKKRGASELLPML 553
>gi|357168295|ref|XP_003581579.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 552
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 204/545 (37%), Positives = 295/545 (54%), Gaps = 59/545 (10%)
Query: 10 MQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSS 69
M++S+P Q +P ++L P DL+ T L + L+ + E+ EEL++
Sbjct: 1 MESSRPLQQQQP-------------ISLLGPTPADLESTSRLEKHLRDAGLYESPEELAA 47
Query: 70 RMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVA 129
R +VL +L +V W+K ++ + P + + + FGSYRLGVH +G+DIDAL V
Sbjct: 48 REDVLCELRAIVDRWVKRLTAQRGYPDGMVSQATAPVLPFGSYRLGVHGRGSDIDALVVG 107
Query: 130 PRHVDR-ADYFSSFFEKLK--TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKE 186
P +VDR D+F L T D VT+L+ V A VPVIKM F G+++D+LFA + L
Sbjct: 108 PSYVDRDHDFFGVLGGVLSEMTDDAVTELQPVPGAHVPVIKMRFRGVQVDLLFASVCLAV 167
Query: 187 IPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIY 246
+P+D+DLRD +L+ +D VRS+NG RV DEILRLVP+ FR LR +KLWAK G+Y
Sbjct: 168 VPEDLDLRDRSVLRGMDLATVRSVNGVRVADEILRLVPDAGAFRTTLRCVKLWAKARGVY 227
Query: 247 SNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK--KPDNVNL 304
SNV+G+ GGV+WA+LVA +CQLYPNAA S LV +FF V + WKWP PV L+ + D+ +L
Sbjct: 228 SNVMGFPGGVAWAILVAFVCQLYPNAAPSVLVSRFFKVLAPWKWPNPVKLRDIEHDDDDL 287
Query: 305 GFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGK 364
VWDPR N DR HLMP++TPAYP NS +NVS +T + ++ + G + + I
Sbjct: 288 RLLVWDPRRNPRDRTHLMPVVTPAYPCMNSCYNVSHATLRTITQQLQIGNAVCQKIVASG 347
Query: 365 TMWDKLFETPNFFTKYRHYL---VLIASSVSAEDQLEWCGLIESKVRHLIGNLE-RNPHI 420
W LFE +FF +Y+ YL V +A D EW G +ES++R L+ +E +
Sbjct: 348 AGWGALFEPFHFFKEYKSYLRVDVKVAGGGGEGDLREWKGWVESRLRQLVMRVETATAGM 407
Query: 421 NLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLD------ 474
L H NP+ Y P + +F+GL
Sbjct: 408 LLCHPNPQAYA--------------------------AKPTDLQRTTSFFVGLSKPQPQP 441
Query: 475 FIAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEY-----LPAHM 529
+ +D++ + + GM++EV H ++K L Y LPA
Sbjct: 442 QEKEQQQPQVPFDLRETAEEFKRKVYMYVSWRPGMEVEVSHNRRKDLPSYVLEQILPAGH 501
Query: 530 LKKDK 534
LK+ +
Sbjct: 502 LKRKR 506
>gi|429961574|gb|ELA41119.1| hypothetical protein VICG_01818 [Vittaforma corneae ATCC 50505]
Length = 501
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/517 (39%), Positives = 298/517 (57%), Gaps = 34/517 (6%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T +L Q Q ++ + L+ N E+++ +R VL +L+ LVK++++
Sbjct: 8 YGITGPASLKESTQESTQLANQMDKYLRESNFFESEDAGQTRERVLGRLDFLVKKFVE-- 65
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
K P + GGKI+TFGSYRLGVH +GADID LCV PRHV R D+F+ F+E+L
Sbjct: 66 ---KTAPEGEQKNYGGKIFTFGSYRLGVHDRGADIDVLCVVPRHVSRKDFFTIFYEELGQ 122
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ V ++ +E+A+VP+I + +DGI ID+ FARL L I +++ L +D +L+++D+KC+
Sbjct: 123 DENVKEISKIEDAYVPIISLTYDGIPIDLTFARLNLPVIAENISLLNDTILRSMDEKCIL 182
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RVTD ILRL+P ++ F ALR IK WAK+ IY N GY GGV++++ VARICQ+
Sbjct: 183 SLNGSRVTDAILRLIPRVDVFHSALRAIKFWAKRRYIYGNAYGYFGGVTFSICVARICQM 242
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPN A +VCKFF +S WKWP PV L + N VWDP+V AD+YH MP+ITP
Sbjct: 243 YPNLCAYDIVCKFFETYSSWKWPTPVQLCSIVDHNYNLKVWDPKVYPADKYHKMPVITPV 302
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP NST NV+ ST ++ E +G ++ K + KLFE FF K++ ++ +
Sbjct: 303 YPSINSTHNVTQSTFILICSELARG----NELMRSKAPFSKLFEVSGFFKKHKMFIEVRI 358
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITA 448
+S + W G I+SK+R L LE +I+LA P+ + TG S + I
Sbjct: 359 NSEDLQAFNIWEGYIQSKIRILCTKLENLENISLAAPFPKAF---TGRSCKASNTDNIG- 414
Query: 449 EGKEEGGENTSPPVSGVASMW--FIGLDFIAANVILN--------LTYDIQHFTNAVH-W 497
G +T SG+++ + L +IA +V +N + I F N V+ W
Sbjct: 415 -----GAASTGSKSSGISNKIEEYFTLFYIAVDVSINPSSSKKIFVGEPIGDFLNFVNSW 469
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
+ + MKIE+ KKK++ L++DK
Sbjct: 470 EGKLPE-----MKIEINSKKKKEIQSMDFIKNLEQDK 501
>gi|57834146|emb|CAE04327.2| OSJNBb0016D16.18 [Oryza sativa Japonica Group]
Length = 556
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 204/542 (37%), Positives = 299/542 (55%), Gaps = 40/542 (7%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
SQ+P + G+ ++L P DL+ T L L+ + E+ EE ++R EVL L +V
Sbjct: 3 SQSPQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESAEETAAREEVLRGLRGVVD 62
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSS 141
W+K ++ + P +A++ + FGSYRLGVH +G+DIDAL V P +VD D+F +
Sbjct: 63 RWVKRLTRQRGYPDGMADRATALVLPFGSYRLGVHGRGSDIDALVVGPSYVDCDRDFFGA 122
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
L V +L+ V A VPVIKM F G+++D+++A + L +P D+DL +L+
Sbjct: 123 LATALAETAAVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRG 182
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
LD RSLNG RV DEILRLVP+ FR LR +K WAK G+YSNV G+LGGV WA+L
Sbjct: 183 LDLATARSLNGVRVADEILRLVPDATAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAIL 242
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN----VNLGFPVWDPRVNVAD 317
VA +C LYPNA+ S L+ +FF VF++WKWP PV+L+ ++ + L PVWDPR N D
Sbjct: 243 VACVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRD 302
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIY---NGKTMWDKLFETP 374
+ HLMPI+TPAYP NS +NVS +T ++ E+ G + ++I +G WDKLF+
Sbjct: 303 KIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPF 362
Query: 375 NFFTKYRHYL-VLIASSVSAEDQL-EWCGLIESKVRHLIGNLERNPH-INLAHVNPECYT 431
NFF Y+ YL V + + ED L EW G +ES++R L +E + + L H++P+ Y
Sbjct: 363 NFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYA 422
Query: 432 DTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLD--FIAANVILNLTYDIQ 489
AE E P S +F+GL + +D++
Sbjct: 423 ----------------AEPHNE------PRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLR 460
Query: 490 HFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRK 549
T + + GM++ V HV++K L Y+ +L+ G + +KR
Sbjct: 461 ATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSYVLRQLLR-----SPGRHDQLKRKRA 515
Query: 550 SD 551
D
Sbjct: 516 DD 517
>gi|308812011|ref|XP_003083313.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
gi|116055193|emb|CAL57589.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
Length = 606
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 223/552 (40%), Positives = 313/552 (56%), Gaps = 54/552 (9%)
Query: 38 SPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPT 97
+PP DL + L E L +V E EE + R EVL +LN L++EW + S AK I T
Sbjct: 23 APPTDRDLALSAALDEKLHTEDVYEDPEECTRREEVLGELNALLQEWTRTASAAKGI--T 80
Query: 98 VAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA---------DYFSSFFEKLKT 148
+ +YTFGSYRLGVH ADID LC+ PRH+ R DY SF++ ++
Sbjct: 81 EDMRPSCNLYTFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGFEENDYEGSFYDVMRK 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMDLRDDMLLKNLDQKCV 207
++ V +A VP IK F G EIDM + L + +P+D+D+ +L NLD V
Sbjct: 141 HPGTEEIVPVRDAIVPEIKTVFRGFEIDMAYTSLPSYTSVPEDLDVCATSVLLNLDDPGV 200
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
+SLNGCRV D++LR VPN + FR+ALRT++LWA++ GIYSNV+G+ GGV+ A+LVAR+CQ
Sbjct: 201 KSLNGCRVADQLLREVPNHDAFRVALRTLRLWAQRRGIYSNVVGFFGGVNLAILVARVCQ 260
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNL-GFPVWDPRVNVADRYHLMPIIT 326
LYPNAA+S LV FF ++S W+W PV+L + L G VWD RVN A+RY LM I+T
Sbjct: 261 LYPNAASSMLVYSFFQLWSAWQWSTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKILT 320
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVL 386
PAYP QNSTFNVS+ST +++ EF++GK ++++I K W+ L+ +F T Y+HYL++
Sbjct: 321 PAYPAQNSTFNVSVSTLEVLKAEFRRGKEVTKNILLNKCKWEDLWIKTSFLTMYKHYLMV 380
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHIN-LAHVNPECYTDTTGVIANGSGSPE 445
S+ +AED +W G + S+V+ LI +E LAH Y D PE
Sbjct: 381 SISAKTAEDFKKWEGWVGSRVKLLIQGIENCTGGQMLAHPGTARYKD-----------PE 429
Query: 446 ITAEGKEEGGENTSPPVSGVASMWFIGLDFIAA-----NVILNLTYDIQHFTNAV-HW-- 497
KE ENT + F+GL F ++ V +NL ++ F V W
Sbjct: 430 -----KE---ENTH-------VILFLGL-FPSSLKKKEKVAMNLNPAVEQFQMQVTSWMD 473
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHM---LKKDKKTKSGDQNTSAKKRKSDQAL 554
+AT GM+ VRHVK+K L ++ + +K ++KKRK +
Sbjct: 474 RATGESNWVPGMQAMVRHVKRKDLPGFVREEIDGYVKDVYDESEVSAEAASKKRKDGGSE 533
Query: 555 DE--LGDKSRPR 564
DE + D P+
Sbjct: 534 DENNIADDEEPK 545
>gi|406868090|gb|EKD21127.1| Poly(A) polymerase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 579
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 207/547 (37%), Positives = 299/547 (54%), Gaps = 52/547 (9%)
Query: 50 ELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTF 109
EL LK N ET EE + R VL L + +E++++V+ A+ + + GGKI TF
Sbjct: 30 ELISELKRQNNYETPEETAKRSAVLKSLQAITEEFVRQVTRAQGSAESAVKSAGGKIETF 89
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEKLKTVDEVTDLRAVEEAFVPVI 166
GS++LGV G+DID L V P+++ +A++F F EK +T+L + +A+VP++
Sbjct: 90 GSFKLGVIGPGSDIDTLVVVPKNITKAEFFQFFPEIMEKSTPPGTITELMSKPDAYVPIL 149
Query: 167 KMNFDGIEIDMLFARLA-LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPN 225
F G++ID+LF R+A L +IP D+ + D LL+ L+++ RSLNG RV DE+L LVP
Sbjct: 150 TFKFSGVDIDLLFGRIASLNQIPKDLKMTDHDLLRGLEEQEARSLNGVRVADEMLTLVPQ 209
Query: 226 IENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVF 285
+ FR ALRTIKLW+ + GI N+ G+ GGV+WA+LVAR+CQLYP A ST+V KFF +
Sbjct: 210 TKVFRTALRTIKLWSARRGIVGNIYGFPGGVAWAILVARVCQLYPKATGSTIVMKFFKII 269
Query: 286 SQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTI 345
+W+WPQPVLLK + L VW+P++N DR H+MPIITPAYP +T NV+ ST +
Sbjct: 270 DKWQWPQPVLLKNIETGTLNLQVWNPQINHTDRRHIMPIITPAYPSMCTTHNVTRSTMAV 329
Query: 346 MQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT-KYRHYLVLIASSVSAEDQLEWCGLIE 404
+ +E K+G I++ + GK W LFE FFT Y++YL +I +S S+E Q +W G +E
Sbjct: 330 IHKELKRGGEIADRVMMGKAKWKDLFEKHTFFTSSYKYYLCIITASTSSEAQTKWAGFVE 389
Query: 405 SKVRHLIGNLERNPHI----------NLAHV-------------NPECYTDTTGVIANGS 441
SKVR L+G L I N AH + E Y G G
Sbjct: 390 SKVRLLVGKLTEQTSIAIAQPFNKGYNRAHRCRTDQQVEEVKTGSLEYYAKDIGTATTGH 449
Query: 442 G-------SPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNA 494
G E T E + G+ V + +IGL L+L++ ++ F
Sbjct: 450 GLAVGALLKDEATCEHESTNGDEKLTMV--YTTTHYIGLKLHEGAKSLDLSWHVEDFK-- 505
Query: 495 VHWQATQSKMMKDGMKIEVRHVKKKQLSEYL----------PAHMLKK--DKKTKSGDQN 542
H + + D + + H K L + L PA KK +K+T S D N
Sbjct: 506 -HTCSGWDQYKDDVNALHISHKKNYDLPDDLFDEGDVKPVKPARPQKKSSNKRTSSDDAN 564
Query: 543 TSAKKRK 549
+ KR+
Sbjct: 565 QPSAKRQ 571
>gi|310798369|gb|EFQ33262.1| hypothetical protein GLRG_08406 [Glomerella graminicola M1.001]
Length = 631
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/411 (44%), Positives = 265/411 (64%), Gaps = 10/411 (2%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRME----VLSKLNNLVKEWI 85
G+T ++L+ P + + + L + L+ N E+ + R VL L + E++
Sbjct: 9 GVTPPISLALPTEAENHAMQTLIDELRRQNTFESPTDTEKRQALSETVLEHLARICDEFV 68
Query: 86 KEVSIAKNIP-PTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFE 144
K V+ + + GKI+T+GSYRLGV+ G+DID L VAP++V RADYF F +
Sbjct: 69 KRVARKREEGNDALIRDARGKIFTYGSYRLGVYGPGSDIDTLVVAPKYVTRADYFEIFPD 128
Query: 145 KLKTV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDDMDLRDDMLLK 200
LK + +TD+ V +AFVP+IK F GI ID++F+R+A LK++P D +++D LL+
Sbjct: 129 LLKEMAPPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQLPKDFNVQDSGLLR 188
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
LD+ +RSLNG RVTDEIL LVP F+LALR IKLWA++ IY+N++G+ GGV+WAM
Sbjct: 189 GLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVAWAM 248
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYH 320
LVAR+CQLYP AA+S +V KFF + +W WPQPVLLK + L VW+P++ D++H
Sbjct: 249 LVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKHVEGGPLQVRVWNPKLYKGDQFH 308
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK- 379
LMP+ITPAYP +T+N++ S T++Q+E ++G I++ I G++ W LF FFT+
Sbjct: 309 LMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRSPWSDLFVKHTFFTQG 368
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
Y++Y+ +I SS E W G +ESKVR L+ LE++ I LAH + Y
Sbjct: 369 YKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQHQSIALAHAFNKGY 419
>gi|209878111|ref|XP_002140497.1| poly(A) polymerase protein [Cryptosporidium muris RN66]
gi|209556103|gb|EEA06148.1| poly(A) polymerase protein, putative [Cryptosporidium muris RN66]
Length = 647
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 178/393 (45%), Positives = 256/393 (65%), Gaps = 6/393 (1%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ S P D + T +L ++ N+ ET E + R ++L+ LN +V+EWI E
Sbjct: 24 WGVTPPISESLPTPQDYKLTEQLIIAMRSENLYETVEGMKKREQILASLNKMVREWIYEA 83
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S+ ++ + GG IYTFGSYRLGV G+DID LC+ PRH+ R +F+ F KL+
Sbjct: 84 SLEHSMSEEESLTAGGGIYTFGSYRLGVVAAGSDIDTLCIVPRHITRDSFFTFFLAKLQQ 143
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+T ++ V +A+ P+IKM + GIE+D+LFA L L IP D++ DD LL+N+D+K R
Sbjct: 144 DIHITKIQPVPDAYTPIIKMVYYGIEMDLLFACLNLSRIPSDLNTLDDDLLRNVDEKTAR 203
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRV D IL+LVPN E+FR ALR +K W+K GIYSNVLGYLGG+SWA+L ARICQL
Sbjct: 204 SLNGCRVNDMILQLVPNKESFRTALRFVKHWSKSRGIYSNVLGYLGGISWAILTARICQL 263
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN------LGFPVWDPRVNVADRYHLM 322
YPN+A + ++ +FF V+ W+W PV+L + V +GF VW+P N DR HLM
Sbjct: 264 YPNSAPNQIINRFFYVYKAWQWKNPVILCEIKEVPKNSPGLMGFRVWNPNTNPQDRAHLM 323
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRH 382
PIITPA+P NST NV+ +T ++ EE ++G + ++I N + W L+ FF ++H
Sbjct: 324 PIITPAFPSMNSTHNVTQTTLRVITEELQRGSELVKEIENERAQWSDLWSPYMFFENHKH 383
Query: 383 YLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
++ + + S + +W G IESK+R L+ LE
Sbjct: 384 FIQVKMLANSEQAFQKWTGWIESKIRFLVRKLE 416
>gi|395539230|ref|XP_003771575.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 379
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 179/260 (68%), Positives = 214/260 (82%), Gaps = 1/260 (0%)
Query: 18 DGKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSK 76
G Q+Q P YG+T+ ++L P + D T++L E LKP+ V E ++EL R+ +L K
Sbjct: 108 QGSQQTQPPQKHYGITSPISLVAPKETDCILTQKLIETLKPFGVFEEEKELQRRILILGK 167
Query: 77 LNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA 136
LNNLVKEWI E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVD++
Sbjct: 168 LNNLVKEWIWEISESKNLPQSVNENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDQS 227
Query: 137 DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDD 196
D+F+SF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ P+D+DL DD
Sbjct: 228 DFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTFPEDLDLHDD 287
Query: 197 MLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IK+WAK H IYSN+LG+LGGV
Sbjct: 288 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKIWAKHHNIYSNILGFLGGV 347
Query: 257 SWAMLVARICQLYPNAAAST 276
SWAMLVAR CQLYPNA AST
Sbjct: 348 SWAMLVARTCQLYPNAIAST 367
>gi|396488901|ref|XP_003842971.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
gi|312219549|emb|CBX99492.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
Length = 577
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 199/522 (38%), Positives = 303/522 (58%), Gaps = 30/522 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+A++ + P + + L E L NV ET E R +V+ L +V+E+++ V
Sbjct: 9 YGVTSAISTAGPGPEEAKLNDSLVETLTRKNVFETPEGNKKRDDVIRHLQTVVEEFVRRV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
K + + GGK++TFGSY LGVH +DID+L V P+ V D+F +F F +
Sbjct: 69 CKQKGVKQAAIDVAGGKVFTFGSYALGVHGPTSDIDSLVVVPKQVSIDDFFRNFPSIFRE 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMDLRDDMLLKNLDQ 204
+ +++T+L VE+AFVP+IKM + G+ +D++FA L L +P DM+ + L L +
Sbjct: 129 MSKSEDITELNPVEDAFVPIIKMEYRGVSLDLIFASLPKLSSVPRDMETIEKKNLDGLAE 188
Query: 205 KCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVAR 264
+ +RS+NG RVT E+L VP+ +FR ALR IKLW+ + GIY V GY GGV+WA++VAR
Sbjct: 189 QAMRSVNGTRVTKELLAAVPHPGSFRHALRAIKLWSNERGIYGAVFGYPGGVAWAIMVAR 248
Query: 265 ICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPI 324
ICQLYP A +T+V KFF + +W WP+PVLLK + +G VW+P++ DR HLMPI
Sbjct: 249 ICQLYPFANGATIVSKFFSLMQKWSWPRPVLLKHIEEGAMGLRVWNPQIYHGDRSHLMPI 308
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHY 383
ITPA+P ST V ST IMQEEF++ I + I+ G WD LFE +FFTK +++Y
Sbjct: 309 ITPAFPSMCSTHTVMPSTLRIMQEEFQRADQIMQHIFAGTKTWDALFERHSFFTKDHKYY 368
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERN-PHINLAHVNPECY--------TDTT 434
L ++A+S + E + GL++SKVRH++ ++ I+ A P+C+ D
Sbjct: 369 LTIVAASRTQEAHERFNGLVQSKVRHIVKGIDDGQTGIDTARPYPKCFERVHRCTNEDQV 428
Query: 435 GVIANGS-----GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIA-ANVILNLTYDI 488
++ GS + E+ AEG N + AS W+IGL L+++Y +
Sbjct: 429 FEVSQGSLKYMIPASEVPAEGASLA--NGDAQIMYTAS-WYIGLTVTTEGGRALDISYPV 485
Query: 489 QHFTNAVHWQATQSKMMKD-GMKIEVRHVKKKQLSE--YLPA 527
F + + T +++ D M ++V H + L + +LP
Sbjct: 486 SQFRSFI----TDAEVFDDKTMSVKVIHTRNTALPDDLFLPG 523
>gi|380471549|emb|CCF47226.1| hypothetical protein CH063_04087 [Colletotrichum higginsianum]
Length = 619
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 180/411 (43%), Positives = 265/411 (64%), Gaps = 10/411 (2%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRM----EVLSKLNNLVKEWI 85
G+T ++ + P + + + L + L+ N E+ + R +VL L + E++
Sbjct: 9 GVTPPISSALPTEAENHAMQTLIDELRRQNTFESPADTQKRQMPSEKVLEHLARICDEFV 68
Query: 86 KEVSIAKNIP-PTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFE 144
K V+ + + GKI+T+GSYRLGV+ G+DID L VAP++V RADYF F +
Sbjct: 69 KRVAREREKGNDALIRDARGKIFTYGSYRLGVYGPGSDIDTLVVAPKYVTRADYFEIFPD 128
Query: 145 KLKTV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDDMDLRDDMLLK 200
LK + +TD+ V +AFVP+IK F GI ID++F+R+A LK++P D +++D LL+
Sbjct: 129 LLKEMAPPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQLPKDFNVQDSGLLR 188
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
LD+ +RSLNG RVTDEIL LVP F+LALR IKLWA++ IY+N++G+ GGV+WAM
Sbjct: 189 GLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVAWAM 248
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYH 320
LVAR+CQLYP AA+S +V KFF + +W WPQPVLLK+ + L VW+P++ D++H
Sbjct: 249 LVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKQVEGGPLQVRVWNPKLYKGDQFH 308
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK- 379
LMP+ITPAYP +T+N++ S T++Q+E ++G I++ I G+ W LF FFT+
Sbjct: 309 LMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRNPWSDLFVKHTFFTQG 368
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
Y++Y+ +I SS E W G +ESKVR L+ LE++ I LAH + Y
Sbjct: 369 YKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQHQSIALAHAFNKGY 419
>gi|398390670|ref|XP_003848795.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
gi|339468671|gb|EGP83771.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
Length = 559
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/417 (42%), Positives = 260/417 (62%), Gaps = 13/417 (3%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG++ ++ PP DL + L E LK N E+ +E R +VL++L L+ + ++ V
Sbjct: 9 YGVSPPISTDPPKPQDLALSESLMEELKAQNNFESPDETKKRGDVLARLQKLLHQLVQIV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFS---SFFEK 145
K +P + ++ GGKI+T+GSYRLGV+ G+DID L VAPRHV R D+F + +
Sbjct: 69 GKQKKLPNEILKESGGKIFTYGSYRLGVYGPGSDIDTLMVAPRHVTREDFFEHMPTLLRQ 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
T DE+T+L V VP+IK+ G+ ID++F+ L +P +++L D+ LL+ L +
Sbjct: 129 ATTPDELTELTPVPGITVPIIKLELCGVSIDLIFSALDRASVPKNLELTDNNLLRGLTEV 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTD IL+LVP FR+ALR +KLWA++ IY NV+G+ GGV++AM+VARI
Sbjct: 189 DLRCVNGTRVTDRILQLVPQTRVFRVALRAVKLWAQRRAIYGNVVGFPGGVAYAMMVARI 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP AAA +V KFF V S W+WP+ + L+ + L WDP +N D+ HLMP+I
Sbjct: 249 CQLYPRAAAPMIVQKFFFVISNWQWPRAITLQTREKGPLAEKEWDPTLNRWDKMHLMPVI 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP NST ++ ST+ ++ E K+G I E+IY GK W LF FF++ Y+HY+
Sbjct: 309 TPAYPCMNSTMSIMPSTKAVLLTELKRGHDIMEEIYGGKKQWKDLFVKQKFFSEAYQHYI 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNP---------ECYTD 432
+I + + E Q W GL++S++R LI +E++ ++ V P EC TD
Sbjct: 369 CVITAGKTKEAQQAWSGLVQSRLRRLIQGIEQSDADSVELVQPFNKGIDRVHECKTD 425
>gi|66357032|ref|XP_625694.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
gi|46226666|gb|EAK87645.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
Length = 699
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/393 (46%), Positives = 256/393 (65%), Gaps = 6/393 (1%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ + D + T L ++ N+ E+ E + R VL+ LN LV+EWI E
Sbjct: 20 YGVTPPISEAMATPQDYKLTENLIIAMRQENLYESVEGMKKREYVLASLNKLVREWIYEA 79
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S+ ++ A GG I+TFGSYRLGV G+DID LC+APRH+ R +FS F KL+
Sbjct: 80 SLEHSMNEEEALSAGGGIFTFGSYRLGVVAAGSDIDTLCIAPRHISRESFFSFFLAKLQQ 139
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
VT ++ V +A+ P+IKM + G+E+D+LFA L L IP+D++ DD LLKN+D K R
Sbjct: 140 DINVTKVQPVPDAYTPIIKMVYHGMEMDLLFACLNLSRIPNDLNTLDDDLLKNVDDKTAR 199
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRV D IL+LVPN E+FR ALR +K W+K GIYSNVLGYLGG+SWA+L ARICQL
Sbjct: 200 SLNGCRVNDMILQLVPNKESFRTALRFVKHWSKARGIYSNVLGYLGGISWAILTARICQL 259
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLL----KKPDNVN--LGFPVWDPRVNVADRYHLM 322
YPNAA S ++ +FF ++ W+W PV+L + P N +GF VW+P +N DR H+M
Sbjct: 260 YPNAAPSQIINRFFYIYKTWQWKNPVILCEIKEVPKNTPGLMGFRVWNPNLNPQDRAHVM 319
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRH 382
PIITPA+P NST NV+ +T ++ +E ++ I +DI N K W ++ FF K++H
Sbjct: 320 PIITPAFPSMNSTHNVTHTTLGVITDELQRAYRIIQDIENDKATWHDVWSPFLFFEKHKH 379
Query: 383 YLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
++ + S + + +W G IESK+R L+ LE
Sbjct: 380 FIQVKMLSNNEQAFHKWIGWIESKLRFLVRKLE 412
>gi|413926073|gb|AFW66005.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 375
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 168/330 (50%), Positives = 228/330 (69%), Gaps = 1/330 (0%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G L+L+ P DLQRT EL + L + E EE + R +VLS++ +VKEW+K+++
Sbjct: 21 GTDPPLSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLSEIGLIVKEWVKQLT 80
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKT 148
K + E+ ++TFGSYRLGVH GADID LCV P +V+R D+F + L
Sbjct: 81 RKKGYAEQLVEQANAILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVTLHGILAE 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+EV +L+ V +A VPV+K F GI ID+L+A ++L IP D D+ +L ++D+ VR
Sbjct: 141 KEEVAELQPVPDAHVPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCDVDEATVR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRV D+ILRLVPN+ENFR LR +K WAK+ G+YSN+ G+LGGV+WA+LVAR+CQL
Sbjct: 201 SLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVARVCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA S LV +FF VF+QW+WP PV+L +N +LGF +WDPR N DR HLMPIITPA
Sbjct: 261 YPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISE 358
YP NS++NVS ST ++ E+F+ G + +
Sbjct: 321 YPCMNSSYNVSTSTLRVIMEQFQFGNKVCQ 350
>gi|384247369|gb|EIE20856.1| Poly(A) polymerase, partial [Coccomyxa subellipsoidea C-169]
Length = 504
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 188/410 (45%), Positives = 254/410 (61%), Gaps = 32/410 (7%)
Query: 38 SPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPT 97
+PP D Q+T +L CL+ + E++EE R EVL +L+ LVKEW++ V +
Sbjct: 6 APPTTKDFQQTADLELCLREQGLYESNEEAVLREEVLGRLDRLVKEWVQRVCAWLGLGEF 65
Query: 98 VAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK-----LKTVDEV 152
+ KI+TFGSYRLGVH GADID LCV PRHV R +F E L + EV
Sbjct: 66 GEVETNAKIFTFGSYRLGVHGPGADIDTLCVGPRHVSRDLHFFGTEEHCLQKMLSDLPEV 125
Query: 153 TDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNG 212
T+L+ V ++FVPVIKM F G+ ID+L+A+LA +P+++D+ L+N D K VRSLNG
Sbjct: 126 TELQPVVDSFVPVIKMKFSGVSIDLLYAQLATAVVPENLDVGAISTLRNADDKSVRSLNG 185
Query: 213 CRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNA 272
CRVTD +L V +IE FR ALR IKLWA++ GIYSNV+GYLGGV+WA+LVA C+LYP
Sbjct: 186 CRVTDTLLNQVESIETFRTALRVIKLWAERRGIYSNVVGYLGGVNWAILVAYTCKLYPCG 245
Query: 273 AASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQ 332
AS +V +FF VF++W WP P++L++ ++ +G VWDPR+N D HLMPIITPAYP
Sbjct: 246 IASVIVDRFFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINPRDSMHLMPIITPAYPAA 305
Query: 333 NSTFNVSIST------RT------IMQEEFKQGKTISEDIY--NGKTMWDKLFETPNFFT 378
NS++NVS ST RT ++QEEF+ G+ + I G T W KL E FF
Sbjct: 306 NSSYNVSESTLAAMKARTQLHQTCLLQEEFEHGEKVCTRILAEGGLTKWHKLLEPVPFFR 365
Query: 379 KYRHYL-----------VLIASSVSAEDQLE--WCGLIESKVRHLIGNLE 415
YR+YL + A+ L+ W G + S++R L+ +E
Sbjct: 366 NYRNYLQARLFLTPSQFIPFATCCFMHCILQEAWDGWVHSRLRQLVMRVE 415
>gi|384494476|gb|EIE84967.1| hypothetical protein RO3G_09677 [Rhizopus delemar RA 99-880]
Length = 408
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 171/387 (44%), Positives = 249/387 (64%), Gaps = 8/387 (2%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T L+L P + D++ T EL + L Y + ++ E R VL L+ + K++++ V
Sbjct: 12 GITEPLSLEKPKEHDIKLTDELQKTLVQYGLYDSKERAKQREYVLKSLDKMTKKFVQIVY 71
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+ A + GGK+ T+GSYRLG + ADID LCV P++V R D+F+ L++
Sbjct: 72 ERQGFSKQEAIQAGGKVLTYGSYRLGANAADADIDTLCVFPKYVSRKDFFTIMLSLLRSN 131
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+++ D+ V +++VPVIK ++ I ID + ARL + ++P+D+DL D +L LD+ +RS
Sbjct: 132 EQIKDITPVTDSYVPVIKFKYNDIPIDFVCARLTVDQVPEDIDLSDPKILWGLDEYSIRS 191
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNG RV D+ILRLVPNIE FR ALR IKLWA + IYSN+LG+LGGV+WA+LVAR+CQLY
Sbjct: 192 LNGARVADDILRLVPNIETFRTALRCIKLWATRKAIYSNILGFLGGVAWAILVARVCQLY 251
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPV-----WDPRVNVADRYHLMPI 324
P+A+AST+V FF + W WP PV+LK ++ G P+ W+P++N DR H MPI
Sbjct: 252 PHASASTVVYHFFQILVHWSWPSPVMLKAVED---GPPLAATRPWNPKLNPTDRSHRMPI 308
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL 384
ITP+YP ST NV ST+ I+ E KQ I + I G W +LF++ NFF Y YL
Sbjct: 309 ITPSYPSMCSTHNVIPSTQRIIMGEIKQAAEIVQKIRTGSATWARLFQSHNFFEIYMQYL 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLI 411
+ + + QL+W GL+E+++R L+
Sbjct: 369 QITVVADNYNLQLKWAGLVEARLRQLL 395
>gi|119186325|ref|XP_001243769.1| hypothetical protein CIMG_03210 [Coccidioides immitis RS]
Length = 587
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 177/406 (43%), Positives = 248/406 (61%), Gaps = 16/406 (3%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G T ++ + P +L L LK N E E R ++L + + E++K V
Sbjct: 9 WGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVKTV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
K + + GGKI+ +GSYRLGV+ G+DID L V P+HV D+F F E+
Sbjct: 69 GRRKGLSQAAIDVSGGKIFAYGSYRLGVYGPGSDIDTLVVGPKHVAIEDFFLDFPPTLER 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ D + L V +A+VP+IK+ GI ID++FARL + IP D+DLR+ LL+ LD++
Sbjct: 129 MAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDER 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTDEIL LVP + FRLALR IKLWA+ GV+WAMLVAR+
Sbjct: 189 EIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQ------------SGVAWAMLVARV 236
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A S +V KFF + + W WPQPVLLK ++ L VW+P++ DR+HLMPII
Sbjct: 237 CQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPII 296
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+ ++ E K+G I E I+ G+ W LF FF+K Y++YL
Sbjct: 297 TPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYL 356
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
+ ASS S E Q W GL+E+K+RHL+ L++ I++AH P+ +
Sbjct: 357 NITASSTSKEAQSVWSGLVEAKLRHLVIALDKKASIDVAHPFPKGF 402
>gi|189208746|ref|XP_001940706.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976799|gb|EDU43425.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 579
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 198/523 (37%), Positives = 299/523 (57%), Gaps = 32/523 (6%)
Query: 20 KPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
KP Q +G+T+A++ +PP + D+++ L LK NV ET E R VL + N
Sbjct: 6 KPTRQ----FGVTSAISEAPPTEQDIRKNDSLITTLKDENVFETPEGNQQRESVLKDIQN 61
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF 139
+V+E+++ V K + ++ + GGKI+TFGS+ LGVH +DID L VAP+ V D+F
Sbjct: 62 VVEEFVRRVGKKKGVQQSIIDAAGGKIFTFGSFALGVHGPKSDIDTLVVAPKFVSIDDFF 121
Query: 140 SSF---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALK-EIPDDMDLRD 195
+ F F++L ++ + VE+AFVP+IKM + G+ ID+LF L + IP +M +
Sbjct: 122 AIFPSTFKELCNEKDIQEFVPVEDAFVPIIKMEYQGVSIDLLFCSLPKRPSIPLNMTTIE 181
Query: 196 DMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGG 255
L+ L + RS+NG RVT+E+L VP +FR ALR IKLW+ + GIY V GY GG
Sbjct: 182 KKDLEGLSESATRSVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGG 241
Query: 256 VSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
V+WA++VARICQLYP A +T+V KFF + +W WP+PV+LK + ++G VW+P+V
Sbjct: 242 VAWAIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYG 301
Query: 316 ADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPN 375
DR HLMPIITPA+P +T V ST IM+EEF + +I +DI+ K W LFE
Sbjct: 302 GDRAHLMPIITPAFPSMCATHTVMPSTLRIMKEEFGRADSILQDIFANKKDWKALFERHT 361
Query: 376 FFTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE--------RNPHINLAHVN 426
FFTK +++YL ++A+S + E + GL++SK+RH+I ++ P+I
Sbjct: 362 FFTKDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERA 421
Query: 427 PECYTDTTGVIANGS-----GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVI 481
D +A GS E AEG E +T+ + + ++IGL
Sbjct: 422 HRITDDQFKEVAQGSLDYLIPKSEADAEGTLEANGDTTIVHT---TTFYIGLTLPTGEAT 478
Query: 482 --LNLTYDIQHFTNAVHWQATQSKMM-KDGMKIEVRHVKKKQL 521
L+++Y + F + + T S + +D M ++V H + L
Sbjct: 479 KSLDISYPVSQFKSYI----TDSDLYNEDLMSVKVVHTRSSAL 517
>gi|147795652|emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
Length = 1097
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 199/501 (39%), Positives = 282/501 (56%), Gaps = 33/501 (6%)
Query: 116 VHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIE 174
VH GADID LCV PRH R D+F + L + EVT+L V +A VPV++ F G+
Sbjct: 283 VHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEVTELHPVPDAHVPVMRFKFSGVS 342
Query: 175 IDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALR 234
ID+L+A+L+L IP+D+D+ D +L+N D++ VRSLNGCRVTD+ILRLVPNI+NFR LR
Sbjct: 343 IDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLR 402
Query: 235 TIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPV 294
++ WAK+ G+YSNV G+LGG++WA+LVARICQLYPNA S LV +FF V++QW+WP PV
Sbjct: 403 FMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPV 462
Query: 295 LLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGK 354
+L + LG VWDPR DR+HLMPIITPAYP NS++NVS ST IM EEFK+G
Sbjct: 463 MLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGN 522
Query: 355 TISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNL 414
ISE + K W L E FF Y++YL + ++ +A+D +W G +ES++R L +
Sbjct: 523 EISEVMEANKADWXTLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKI 582
Query: 415 ERNPHINL-AHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGL 473
ER+ + L H +P ++D S P +F+GL
Sbjct: 583 ERHTYNMLQCHPHPGDFSD-------------------------KSRPFH---CCYFMGL 614
Query: 474 DFI-AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKK 532
+DI+ + + K GM+I V HV+++ + ++ ++
Sbjct: 615 QRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRP 674
Query: 533 DKKTK-SGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSS-EC 590
+ TK + ++ + S QA+ E + S+ R D N ++ N SSS E
Sbjct: 675 SRPTKVASERRRVLEPNVSTQAVLEGAEDSKKRKREDENVETNSRNAKCLVAAASSSHEV 734
Query: 591 TEDNSLSQVYGLNDSVADSID 611
N L DS+D
Sbjct: 735 LSSNPLVSTVNACSIKVDSMD 755
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 57/86 (66%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++L PN+LD+ +T+EL + L + E+ EE SR EVL +L+ +VK W+K +S
Sbjct: 17 GITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVKAIS 76
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLG 115
AK + + ++ KI+TFGSYRLG
Sbjct: 77 RAKGLNEQLVQEANAKIFTFGSYRLG 102
>gi|414585702|tpg|DAA36273.1| TPA: hypothetical protein ZEAMMB73_834827 [Zea mays]
Length = 552
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/520 (37%), Positives = 289/520 (55%), Gaps = 34/520 (6%)
Query: 35 LNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNI 94
++L P D++ T +L + L+ + E+ EE + R EVL L +V W+K++ +
Sbjct: 13 ISLVGPTPADIEATAQLEKLLREAGMYESAEESAVRAEVLRDLQGIVDLWVKQLMLKHGY 72
Query: 95 PPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSSFFEKLKTVDEVT 153
P + ++ + FGSYRLGV G+DIDAL V P VDR D+F L + VT
Sbjct: 73 PDAMVDEATAFVLPFGSYRLGVLGGGSDIDALVVGPSFVDRDQDFFGVLAGVLAETEAVT 132
Query: 154 DLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGC 213
+L V A VPV+K+ F G+++D+++A + L +P ++DL D +L+ LD RS+NG
Sbjct: 133 ELHPVPGAHVPVMKLRFRGVQVDLVYASVNLPVVPRNLDLSDRHVLRGLDHVTARSMNGV 192
Query: 214 RVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA 273
RV DEI+RLVP+ FR LR +KLWAK G+YSNV G+LGGV+WA+LVAR+CQLYPNA
Sbjct: 193 RVADEIVRLVPDAAAFRTTLRCVKLWAKSRGVYSNVSGFLGGVAWAILVARVCQLYPNAV 252
Query: 274 ASTLVCKFFLVFSQWKWPQPVLLKKPDNVN-LGFPVWDPRVNVADRYHLMPIITPAYPQQ 332
S LV +FF VFS W+WP PV+L ++ + LG PVWD R N+ DR HLMP+ITPAYP
Sbjct: 253 PSMLVSRFFKVFSHWRWPIPVMLCDIEHDDELGLPVWDVRRNLPDRSHLMPVITPAYPCM 312
Query: 333 NSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM-WDKLFETPNFFTKYRHYL-VLIASS 390
N T+NVS +T +++E+ + G + I G W LF+ FF+ ++ YL V A +
Sbjct: 313 NCTYNVSRATHRVIKEQIQAGDVACQKIAAGGGRDWGALFQPSPFFSTHKSYLQVDAAVA 372
Query: 391 VSAEDQLEWCGLIESKVRHLIGNLERNPHIN-LAHVNPECYTDTTGVIANGSGSPEITAE 449
AE+ EW G +ES++R L+ +ER+ L H NP Y + S
Sbjct: 373 GGAEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRRASSF--FVGL 430
Query: 450 GKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKDGM 509
K + PP G F +L D+ + K + G+
Sbjct: 431 SKPQQQHKPHPP-EGYPPF------FDLRATVLEFQQDVYSY-----------KFWRPGL 472
Query: 510 KIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRK 549
++ V+HV++ + LPA++++ K G +N KRK
Sbjct: 473 ELVVKHVRRNK----LPAYVMQ-----KIGGRNIHELKRK 503
>gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae]
Length = 694
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 253/388 (65%), Gaps = 2/388 (0%)
Query: 34 ALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKN 93
A+ +PP DL+++ +L + + +E+D ++ R +L++L ++ ++W+K+V + K
Sbjct: 19 AIRTTPPEPKDLEQSAKLQSFMDEHFPTESDANITRRSLILAELRSIFRQWVKQVCMDKG 78
Query: 94 IPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVT 153
+P +A GG+I GSYRLGV+ GADID +CVAPRHV R D+FSS E +V+
Sbjct: 79 VPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSSLKEIFLQHPKVS 138
Query: 154 DLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGC 213
+L A+E A VP++ +++ I ID+ A L IP+++++ DD +L +D +SLNG
Sbjct: 139 NLVAIEGAIVPILTFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGP 198
Query: 214 RVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA 273
RVT+ +++L PN E+F LR ++ WAK+ G+YSN +GYLGGV+W +LV I QLYP AA
Sbjct: 199 RVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAA 258
Query: 274 ASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQN 333
STL+ +FF+V + WKWP + L K + NLG VW+ +RY +MPI+TPAYP N
Sbjct: 259 PSTLLLRFFMVLNNWKWPLAIQLCKTHDANLGLEVWNANAG-HNRYQVMPILTPAYPSMN 317
Query: 334 STFNVSISTRTIMQEEFKQGKTISEDIYN-GKTMWDKLFETPNFFTKYRHYLVLIASSVS 392
S+FNVS + T+M+EEFK+G TI +D+ + G + W LFE +FF ++HYL + +
Sbjct: 318 SSFNVSTHSLTVMKEEFKRGLTIVQDVLSKGGSEWGPLFEPSDFFAVHQHYLAVEVYTEK 377
Query: 393 AEDQLEWCGLIESKVRHLIGNLERNPHI 420
E++ WCG ES++R L+ +L NP +
Sbjct: 378 QEEEAAWCGFCESRMRKLVESLAYNPAL 405
>gi|402077328|gb|EJT72677.1| Poly(A) polymerase pla1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 633
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/405 (45%), Positives = 253/405 (62%), Gaps = 12/405 (2%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T +++S P++ +LQ T L L+ N E+ E R VL+ L + ++K V
Sbjct: 8 GVTPPVSVSLPSEFELQATDALLAELRAQNSFESPLETEKRHRVLASLQTIADAFVKVV- 66
Query: 90 IAKNIPP---TVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---F 143
AK P + + K++ +GS RLGV G+DID L V PR+V R DYF F
Sbjct: 67 -AKEREPHNAVLIKDARAKVFAYGSLRLGVWGPGSDIDTLVVGPRYVTREDYFQHFPDLL 125
Query: 144 EKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDD--MDLRDDMLLK 200
K+ +TDL VEEAFVP+IK + GI ID++F+R+A LK++P D L+DD LL+
Sbjct: 126 VKMAPPGAITDLTVVEEAFVPIIKFEYHGISIDLIFSRIATLKQLPSDPAWGLKDDNLLR 185
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
LD+K +RS+NG RVTDEIL LVP FR ALR IKLWA++ IY N++G+ GGV+WAM
Sbjct: 186 GLDEKELRSVNGTRVTDEILSLVPEQNIFRTALRAIKLWAQRRAIYGNIMGFPGGVAWAM 245
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYH 320
LVAR+CQLYP A +S +V KFF + QW WPQPVLLK + L VW+PRV D YH
Sbjct: 246 LVARVCQLYPKATSSVIVNKFFSILLQWPWPQPVLLKPIGDGPLQVRVWNPRVYKGDSYH 305
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK- 379
LMP+ITPAYP +TFNV+ S+ T+++ E + I+ +I W +F FFTK
Sbjct: 306 LMPVITPAYPSMCATFNVTRSSMTVIKRELQLAAEITNNIMCSTKPWKDMFAKHTFFTKD 365
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+++Y+ +I++S E W G +ESKVR L+ +LER+ I +A
Sbjct: 366 FKYYMQVISASRDKEAHKIWSGFVESKVRMLVQSLERHESIAVAR 410
>gi|330915746|ref|XP_003297151.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
gi|311330327|gb|EFQ94750.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
Length = 566
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 199/523 (38%), Positives = 295/523 (56%), Gaps = 32/523 (6%)
Query: 20 KPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
KP Q +G+T+A++ +PP + D+++ L LK NV ET E R VL + N
Sbjct: 6 KPTRQ----FGVTSAISEAPPTEQDIRKNDSLITTLKDENVFETPEGNQQRESVLKDIQN 61
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF 139
+V+E+++ V K + + + GGKI+TFGS+ LGVH +DID L VAP+ V D+F
Sbjct: 62 VVEEFVRRVGRKKGVQQPIIDAAGGKIFTFGSFALGVHGPSSDIDTLVVAPKFVSIDDFF 121
Query: 140 SSF---FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALK-EIPDDMDLRD 195
+ F F +L ++ + VE+AFVP+IKM + G+ ID+LF L + IP M D
Sbjct: 122 ALFPPTFRELCDEKDIQEFVPVEDAFVPIIKMQYQGVSIDLLFCSLPKRPSIPSKMTTID 181
Query: 196 DMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGG 255
L+ L + RS+NG RVT+E+L VP +FR ALR IKLW+ + GIY V GY GG
Sbjct: 182 KKDLEGLSESATRSVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGG 241
Query: 256 VSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
V+WA++VARICQLYP A +T+V KFF + +W WP+PV+LK + ++G VW+P+V
Sbjct: 242 VAWAIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYG 301
Query: 316 ADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPN 375
DR HLMPIITPA+P +T V ST IM+EEF + I +DI+ K W LFE
Sbjct: 302 GDRAHLMPIITPAFPSMCATHTVMPSTLRIMKEEFGRADKILQDIFANKKDWKALFERHT 361
Query: 376 FFTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE--------RNPHINLAHVN 426
FFTK +++YL ++A+S + E + GL++SK+RH+I ++ P+I
Sbjct: 362 FFTKDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERA 421
Query: 427 PECYTDTTGVIANGS-----GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVI 481
D +A GS E+ AEG E +T+ + ++IGL
Sbjct: 422 HRITDDQFKEVAQGSLDYHIPKSEMDAEGALEANGDTT---VVYTTTFYIGLTLPTGEAT 478
Query: 482 --LNLTYDIQHFTNAVHWQATQSKMM-KDGMKIEVRHVKKKQL 521
L+++Y + F + + T S + +D M ++V H + L
Sbjct: 479 KSLDISYPVSQFKSYI----TDSDLFNEDLMSVKVVHTRSSAL 517
>gi|326437024|gb|EGD82594.1| hypothetical protein PTSG_03248 [Salpingoeca sp. ATCC 50818]
Length = 840
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/496 (38%), Positives = 285/496 (57%), Gaps = 14/496 (2%)
Query: 35 LNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNI 94
L+ P+ L TR+L CLK + E+ E R VL+ LN VK+W+ + S+
Sbjct: 6 LSTEHPSLEQLMSTRKLETCLKKEGIMESTEGYEQRNRVLANLNAFVKDWLYKYSLEHGK 65
Query: 95 PPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTD 154
P A+ + KI+TFGS+RLGVH K DIDAL P+ V RA +FSSF++ L D+V D
Sbjct: 66 SPEAAQLIRAKIFTFGSFRLGVHSKNGDIDALICFPQSVTRAAFFSSFYDALAQRDDVED 125
Query: 155 LRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCR 214
L + E A VP IK+ F G+E+D+L A+L I +DL DD +L+NL + CVRS+NG R
Sbjct: 126 LHSAESAAVPAIKLTFGGVEMDLLMAQLPADSIAPSLDLSDDDILRNLPETCVRSINGRR 185
Query: 215 VTDEILRLVPNI-ENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA 273
VTD+IL L P E+F L LRTIKLWAK+ GIY N L Y+GGV A+LVA+ICQL+P A
Sbjct: 186 VTDKILELCPAAREDFGLCLRTIKLWAKRRGIYGNALCYVGGVHLAILVAKICQLFPYAT 245
Query: 274 ASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLG-FPVWDPRVNVADRYHLMPIITPAYPQQ 332
ASTLV KFF + +W W PV L+ +++ + P W P N D +M I+TP YP Q
Sbjct: 246 ASTLVEKFFWHYKRWDWAIPVELQHVEDLGITHIPHWSPINNYHD-MSVMKILTPVYPSQ 304
Query: 333 NSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVS 392
N+++ V+ ST ++ E + +++ + I +GK W +L++ FF Y HY+ + A + S
Sbjct: 305 NASYTVTRSTLYRIKRELDRAESVVQKIADGKATWPRLWKQIPFFGVYSHYICVQALTNS 364
Query: 393 AEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKE 452
+D+ + GL+ES VR+L+ +LE +P + A P+ + SPE E
Sbjct: 365 EQDRTLYEGLVESTVRNLVTSLEFHPAVTYAIPIPKAFRR----------SPEKDPSTLE 414
Query: 453 EGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKI 511
+ + PP ++WFIGL F A L++ + F V ++ ++ M+
Sbjct: 415 DEDTHERPPEYCWRTLWFIGLVFDPKATEQLDILTVMSDFERRVRFKESRMTRYDPSMRY 474
Query: 512 EVRHVKKKQLSEYLPA 527
V + + ++ +L A
Sbjct: 475 TVDPMARDEIPTWLHA 490
>gi|169598326|ref|XP_001792586.1| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
gi|160704377|gb|EAT90176.2| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
Length = 575
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 189/518 (36%), Positives = 301/518 (58%), Gaps = 31/518 (5%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T +++ +PP + D + L E L NV ET E R EVL+ + +V+E+++
Sbjct: 9 WGITHSISEAPPTEADNKLNDNLIETLTRLNVFETLEGNKRREEVLAHVQKVVEEFVRRA 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
K I + + GGKI+ FGSY LGVH +DID L V P+HV D+F F F +
Sbjct: 69 GKLKGIAQSTLDVAGGKIFFFGSYALGVHGPTSDIDTLIVVPKHVFIEDFFKIFPSIFRE 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMDLRDDMLLKNLDQ 204
L +++++L VE+A+VP+IKM + G+ +D+LFA + + +P +++ D +L++L++
Sbjct: 129 LSNAEDISELVPVEDAYVPIIKMEYRGVSLDLLFASMPTMSSVPKELETVDKSVLRHLEE 188
Query: 205 KCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVAR 264
+RS+NG RV E+L VP +FR ALR +KLWA + IY V GY GG++WA++VAR
Sbjct: 189 TTIRSVNGTRVVKELLSSVPQRRHFRYALRAVKLWANRRAIYGAVFGYPGGIAWAIMVAR 248
Query: 265 ICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDP--RVNVADRYHLM 322
ICQLYP A +T++ KFF + +W+WP+PV+LK+ + G VW+P + D HLM
Sbjct: 249 ICQLYPMACGATILSKFFNLMHKWQWPRPVMLKEHELPEFGLRVWNPAHQSYPPDARHLM 308
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YR 381
P+ITPA+P ST V+ ST+ IM EEF++ I D++NG+ W+ LF +FFT+ ++
Sbjct: 309 PVITPAFPAMCSTHTVTTSTKQIMMEEFQRADKIVRDVFNGQGTWEALFNNHSFFTQDHK 368
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNL-ERNPHINLAHVNPECYTDTTGVIANG 440
+YL +IA+S + E L + GL++SKVR L+ + + I++A PE + +
Sbjct: 369 YYLSVIAASRTKEADLTFHGLVQSKVRLLVAGIDDGQTGIDMARPFPEGFER----VHRC 424
Query: 441 SGSPEITAEGKEEGGENTSPPVSGVAS------------MWFIGLDFIAANVILNLTYDI 488
E+ A K G + PVS V + ++IGL L+++Y
Sbjct: 425 KNEDEVEAVTK--GSLDYMIPVSQVPAAGTTEDHIIYTMTFYIGLRLPKERSTLDISYIT 482
Query: 489 QHFTNAVHWQATQSKMMKDG-MKIEVRHVKKKQLSEYL 525
HF + + T+SK+ +G M ++V H + L + L
Sbjct: 483 NHFRSKI----TESKLYDEGTMSVKVVHTRNTALPDDL 516
>gi|86171578|ref|XP_966239.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
gi|46361205|emb|CAG25069.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
Length = 631
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 211/578 (36%), Positives = 311/578 (53%), Gaps = 73/578 (12%)
Query: 9 SMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELS 68
++Q +K +++G G+T ++L+ P++ D++R+ ++ E LK YN+ E + L
Sbjct: 72 NIQENKKYEEG----------GVTEPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLK 121
Query: 69 SRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCV 128
R VL +N L E++ E+SI + I A + G +YTFGSYRLGV +DID + +
Sbjct: 122 KRENVLGMINKLFHEFLIELSINQGISEEEANNISGNLYTFGSYRLGVITPNSDIDCIFL 181
Query: 129 APRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIP 188
AP+++ R +F+ F+ KL+ V L+A+ E + P+I+ +D ++ID+L A L K +
Sbjct: 182 APQNLTREIFFNEFYLKLQQDRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLK 241
Query: 189 D-DMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYS 247
D L +D +LKNLD+ VRSLNG RV D IL VPN + FR LR IKLWAK GIYS
Sbjct: 242 DCYYSLDNDHILKNLDEVTVRSLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYS 301
Query: 248 NVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNL--- 304
N+LG+LGG+SWA+L A+ICQLYPN S L+CKFF V+S W W PVLL+ N+
Sbjct: 302 NILGFLGGISWALLTAKICQLYPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGL 361
Query: 305 -GFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTI---SEDI 360
FPVWDP N+ D+ H+MPIITPA+P NST NV+ TR I+ EEFK+ +I ED
Sbjct: 362 NNFPVWDPEKNIKDKLHIMPIITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYMEDE 421
Query: 361 YNGKT----------------------MWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE 398
N K+ +W + E + F+ Y+H+L + ++
Sbjct: 422 NNIKSSIRMNKLWPNNNVNNINNSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNS 481
Query: 399 WCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENT 458
W G IESK+R L LE IN + P P+ KE+
Sbjct: 482 WKGWIESKIRLLFKKLET---INELKIRP---------------FPKFYFYKKEK----- 518
Query: 459 SPPVSGVASMWFIGLDFIAANVI---LNLTYDIQHFTN-AVHWQATQSKMMKDGMKIEVR 514
S S +FI L F N NL+Y I+ F + A++W Q + KI +
Sbjct: 519 ----SYYCSSFFIALIFFYKNPYENTFNLSYAIRDFIDIALNW--PQKVKYPNAFKINIM 572
Query: 515 HVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQ 552
+ K+ Q+ E+L ++++K K +N + +Q
Sbjct: 573 YQKRSQVLEFLDIVTKEENQKNKQVMENNDKDETNHNQ 610
>gi|303282577|ref|XP_003060580.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458051|gb|EEH55349.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 656
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 193/504 (38%), Positives = 286/504 (56%), Gaps = 50/504 (9%)
Query: 43 LDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKV 102
+D++ + EL L NV E+ EE + R EVL ++N ++EW+K S AK I + +
Sbjct: 1 MDVKLSAELEARLHLENVFESPEECARREEVLGEINEALQEWVKAASAAKGIEEDLEPRC 60
Query: 103 GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD---------YFSSFFEKLKTVDEVT 153
+YTFGSYRLGVH ADID LC+ PRH+ R++ Y SF+ +K
Sbjct: 61 --NLYTFGSYRLGVHGPAADIDTLCIGPRHLSRSEDFFGSEWTEYEGSFYLAMKNHPGTD 118
Query: 154 DLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMDLRDDMLLKNLDQKCVRSLNG 212
+ AV +A VP +K+ F G E+DM + L + +P+D+D+ +L+NLD V+SLNG
Sbjct: 119 RIVAVPDAVVPELKLIFRGFEVDMAYTSLPSFIAVPEDLDVCQTSILQNLDDASVKSLNG 178
Query: 213 CRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNA 272
CRV D++LRLVPN +FR+ALR +++WA++ G+YSNV G+ GGV+ A+LVAR+CQLYPNA
Sbjct: 179 CRVADQLLRLVPNHASFRIALRALRVWARERGVYSNVQGFFGGVNLAILVARVCQLYPNA 238
Query: 273 AASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQ 332
AAS LV FF ++ W+W PV+L + G VWD RVN A+R+ LM IITPAYP Q
Sbjct: 239 AASMLVYSFFQLWDAWQWTTPVMLTAIIDEGHGLRVWDERVNKAERFQLMKIITPAYPAQ 298
Query: 333 NSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVS 392
NSTFNV+ ST +++ EFK+G+ I G+T W+ L+E FFT ++HYL + +++
Sbjct: 299 NSTFNVTHSTLHVLKREFKRGRETCAKILMGQTKWESLWEPLPFFTMHKHYLQVTMCAIT 358
Query: 393 AEDQLEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEITAEGK 451
+D +W G + S++R L+ +E L AH PE D
Sbjct: 359 EDDFKKWEGWVHSRLRMLVQAVETCSGGALIAHPYPERKQDPA----------------- 401
Query: 452 EEGGENTSPPVSGVASMWFIGLDFIAANV--------ILNLTYDIQHFTNAV-HW--QAT 500
S + +++IGL LNL ++ F V W +A
Sbjct: 402 ---------KDSALHCIYYIGLGPAPPPTTGGPAPRGTLNLNPAVEQFQMLVTSWVNRAD 452
Query: 501 QSKMMKDGMKIEVRHVKKKQLSEY 524
+ + GM++ V+H+K+K + +
Sbjct: 453 GTVQWQPGMEVHVKHMKRKDVPAW 476
>gi|452002314|gb|EMD94772.1| hypothetical protein COCHEDRAFT_1167952 [Cochliobolus
heterostrophus C5]
Length = 578
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 199/530 (37%), Positives = 306/530 (57%), Gaps = 33/530 (6%)
Query: 20 KPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
KP Q +G+T+A++ + P + D++ +L E LK NV ET E R EV+ +
Sbjct: 6 KPSRQ----FGVTSAISEAAPTEHDIKLNDKLIETLKAENVFETPEGNRRREEVIEHIQK 61
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHV---DRA 136
+V+E+I+ V K + +V + GGKI+TFGSY LGVH +DID L VAP+ V +
Sbjct: 62 VVEEFIRRVGKQKGVQQSVIDAAGGKIFTFGSYALGVHGPSSDIDTLVVAPKFVAIHEFF 121
Query: 137 DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKE-IPDDMDLRD 195
++F F ++ VD++ + VE+AFVP+IKM + + ID+LFA L + IP +MD +
Sbjct: 122 EFFPPTFREMSNVDDINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIE 181
Query: 196 DMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGG 255
L+ L + RS+NG RVT+E+L VP +FR ALR IKLW+ + GIY V GY GG
Sbjct: 182 KKDLEGLSESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGG 241
Query: 256 VSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
V+WA++VARICQLYP A +T+V KFF + +W WP+PV+LK + +LG VW+P+V
Sbjct: 242 VAWAIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYG 301
Query: 316 ADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPN 375
DR HLMPIITPA+P +T V ST IM++EF + I + I+ G W+ LFE +
Sbjct: 302 GDRAHLMPIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHS 361
Query: 376 FFTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE--------RNPHINLAHVN 426
FFTK +++YL ++A+S + E + GL++SK+RH++ ++ P+IN
Sbjct: 362 FFTKDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERY 421
Query: 427 PECYTDTTGVIANGS-----GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIA-ANV 480
C D + GS + E+ A+G ++T + + ++IGL A
Sbjct: 422 HRCKDDQFHEVTQGSLEYMIPASEVPADGTAPADDDTHIIYT---TTFYIGLTLPPDATK 478
Query: 481 ILNLTYDIQHFTNAVHWQATQSKMMKDG-MKIEVRHVKKKQLSE--YLPA 527
L+++Y + F + + T S + + M ++V H + L + +LP
Sbjct: 479 SLDISYPVSQFRSYI----TDSDLYDEKLMSVKVVHTRNTALPDDVFLPG 524
>gi|156082541|ref|XP_001608755.1| poly(A) polymerase PAP [Babesia bovis T2Bo]
gi|154796004|gb|EDO05187.1| poly(A) polymerase PAP, putative [Babesia bovis]
Length = 512
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 184/513 (35%), Positives = 296/513 (57%), Gaps = 41/513 (7%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ P++ D + T EL + L N+ ET++ R VL LN ++++++++
Sbjct: 13 YGITDPVSTDGPSESDREDTAELMKFLVAQNLFETEDGKRKRERVLESLNRVLQQFVRKN 72
Query: 89 SIAK-NIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
+I + IP A K+ K+ TFGSYRLG+ +DID LC+ P+ V R +F+ F+ LK
Sbjct: 73 AIKQLGIPDDEASKISAKLLTFGSYRLGIVAPNSDIDCLCLCPQSVTRESFFTDFYNALK 132
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+ +T L AV +A+ PVIK+ +DGI+ID+LFA L + +P+++D+ DD +L+N+++
Sbjct: 133 LLPNITKLHAVPDAYTPVIKLIYDGIDIDLLFANLPAQTVPEEIDVLDDAILRNMNEATA 192
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RS+NGCRV IL VPN +NFR LR +KLWA + G+Y+ V+ Y+GGV+WA+L AR+CQ
Sbjct: 193 RSINGCRVAALILASVPNKDNFRTTLRYVKLWANRRGLYTTVMAYMGGVAWAILTARVCQ 252
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNV-----NLGFPVWDPRVNVADRYHLM 322
LYPN + L+ KFF V++QW W PV+L K V + F VWDPR N DR HLM
Sbjct: 253 LYPNFLPNQLIQKFFRVYAQWNWKCPVMLCKIKEVPNIPGYMSFKVWDPRNNPTDRQHLM 312
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG---KTMWDKLFETPNFFTK 379
P+ITPA+P NST N++++T+ I+ +EFK+ + + G K +W+++ E + F
Sbjct: 313 PVITPAFPSMNSTHNITLTTKRILTDEFKRANDLLKVNAKGAQMKNIWERVLEKEDMFAS 372
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYT------DT 433
++H+LV+ + + +W G I S++R LI +E P+I L PE + D
Sbjct: 373 HKHFLVIEVLATTEHVHGKWEGWIGSRMRFLIKKIETVPNI-LVRPWPEFFKYEHKEWDY 431
Query: 434 TGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTN 493
+ G E + N++ P AN ++ I+ F
Sbjct: 432 ASCVFFGFKCKE------PDNKTNSAEP----------------ANKTFDMRMSIKGFKE 469
Query: 494 AVH-WQATQSKMMKDGMKIEVRHVKKKQLSEYL 525
++ W T+ + KD + + +R++K QL ++
Sbjct: 470 IINSW--TEMEAYKDQIAVNIRYLKNSQLPHFV 500
>gi|451845399|gb|EMD58712.1| hypothetical protein COCSADRAFT_265597 [Cochliobolus sativus
ND90Pr]
Length = 571
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 199/530 (37%), Positives = 306/530 (57%), Gaps = 33/530 (6%)
Query: 20 KPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
KP Q +G+T+A++ + P + D++ +L E LK NV ET E R EV+ +
Sbjct: 6 KPSRQ----FGVTSAISEAAPTEHDIKLNDKLIETLKAENVFETPEGNRRREEVIEHIQK 61
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHV---DRA 136
+V+E+I+ V K + +V + GGKI+TFGSY LGVH +DID L VAP+ V +
Sbjct: 62 VVEEFIRRVGKQKGVQQSVIDAAGGKIFTFGSYALGVHGPSSDIDTLVVAPKFVAIHEFF 121
Query: 137 DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKE-IPDDMDLRD 195
++F F ++ VD++ + VE+AFVP+IKM + + ID+LFA L + IP +MD +
Sbjct: 122 EFFPPTFREMSNVDDINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIE 181
Query: 196 DMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGG 255
L+ L + RS+NG RVT+E+L VP +FR ALR IKLW+ + GIY V GY GG
Sbjct: 182 KKDLEGLSESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGG 241
Query: 256 VSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
V+WA++VARICQLYP A +T+V KFF + +W WP+PV+LK + +LG VW+P+V
Sbjct: 242 VAWAIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYG 301
Query: 316 ADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPN 375
DR HLMPIITPA+P +T V ST IM++EF + I + I+ G W+ LFE +
Sbjct: 302 GDRAHLMPIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHS 361
Query: 376 FFTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE--------RNPHINLAHVN 426
FFTK +++YL ++A+S + E + GL++SK+RH++ ++ P+IN
Sbjct: 362 FFTKDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERY 421
Query: 427 PECYTDTTGVIANGS-----GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIA-ANV 480
C D + GS + E+ A+G ++T + + ++IGL A
Sbjct: 422 HRCKDDQFHEVTQGSLEYMIPASEVPADGTAPADDDTHIIYT---TTFYIGLTLPPDATK 478
Query: 481 ILNLTYDIQHFTNAVHWQATQSKMMKDG-MKIEVRHVKKKQLSE--YLPA 527
L+++Y + F + + T S + + M ++V H + L + +LP
Sbjct: 479 SLDISYPVSQFRSYI----TDSDLYDEKLMSVKVVHTRNTALPDDVFLPG 524
>gi|358332465|dbj|GAA51116.1| poly(A) polymerase, partial [Clonorchis sinensis]
Length = 1210
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 240/346 (69%), Gaps = 8/346 (2%)
Query: 10 MQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSS 69
+ +SKP + PQ G T AL+ P + DL+ ++EL L ++ ET EE++
Sbjct: 870 LMSSKPGDEIPPQC-----LGETGALSFKKPTEQDLKDSQELETTLAQLDIFETPEEITQ 924
Query: 70 RMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVA 129
R E L +L + +WIK+ ++ +N+PP VA+ GKI+TFGSYRLGV+ KGAD+D+L V
Sbjct: 925 RREALMRLQEISNKWIKQKAVEQNLPPHVAKATTGKIFTFGSYRLGVNFKGADVDSLLVV 984
Query: 130 PRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPD 189
PR + R ++FS F L V D+ AV +AFVPV+K+ F G+EID+LFA++ I +
Sbjct: 985 PRFITRQEFFSEFQSVLSENPHVEDIHAVVDAFVPVLKLKFMGVEIDLLFAQIDQMNIAE 1044
Query: 190 DMDLRD--DMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYS 247
+ +L + ++L++N+D+ VRS+NG RV ++IL LV N +F++AL+ I+ WAK+ IYS
Sbjct: 1045 NFNLCENTEVLMRNMDEHDVRSINGVRVNEDILNLVYNKNSFKVALKVIRFWAKRRNIYS 1104
Query: 248 NVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNV-NLGF 306
N LG+LGGVSWA+LV+RICQLYP A+ S LV FF +FSQW WP+PV L++ + + +L
Sbjct: 1105 NTLGFLGGVSWAILVSRICQLYPYASPSMLVYLFFKIFSQWPWPKPVRLRESEYIPSLCL 1164
Query: 307 PVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQ 352
PVWDPR+N+ D+YHLMPI+TP+YP QNS +NV S R I++ E KQ
Sbjct: 1165 PVWDPRLNLMDQYHLMPILTPSYPSQNSAYNVQRSNRIILERELKQ 1210
>gi|145354311|ref|XP_001421431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145354383|ref|XP_001421465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581668|gb|ABO99724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581702|gb|ABO99758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 598
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 214/602 (35%), Positives = 326/602 (54%), Gaps = 58/602 (9%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
+Q+ + ++ P D + ++ L + L+ +V E +E R EVL ++N L++
Sbjct: 14 TQSASAEALNRVMSNEMPTAFDEKLSKALDDKLREEDVYEDADECVRREEVLGEINALLQ 73
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA------ 136
+W+ S K I T + +YTFGSYRLGVH ADID LC+ PRH+ R
Sbjct: 74 DWVLAASERKGI--TEDMRPSCNLYTFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGW 131
Query: 137 ---DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMD 192
DY SF++ ++ + V +A VP IK+ F G EIDM + L + +P+D+D
Sbjct: 132 DENDYEGSFYDVMRKHPGTESIVPVRDAIVPEIKLVFRGFEIDMAYTSLPSYTHVPEDLD 191
Query: 193 LRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGY 252
+ ++ NLD V+SLNGCRV D++LR+VPN + FR+ALRT++LWA++ G+YSNV+G+
Sbjct: 192 VCQTSVMMNLDDPGVKSLNGCRVADQLLRVVPNHDAFRVALRTLRLWAQRRGVYSNVVGF 251
Query: 253 LGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNL-GFPVWDP 311
GGV+ A+LVAR+CQLYPNAA S LV FF ++S W+W PV+L + L G VWD
Sbjct: 252 FGGVNLAILVARVCQLYPNAAPSMLVYSFFQLWSAWQWTTPVMLVPIVDEGLPGMRVWDE 311
Query: 312 RVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLF 371
RVN A+RY LM I+TPAYP QNSTFNVS+ST +++ EFK+GK +++ I W++L+
Sbjct: 312 RVNKAERYQLMKILTPAYPAQNSTFNVSVSTLEVLKAEFKRGKEVTKMILLNTAKWEQLW 371
Query: 372 ETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHIN-LAHVNPECY 430
+ NF KY+HYL++ S+ + +D +W G + S+++ LI +E LAH Y
Sbjct: 372 CSLNFLEKYKHYLMVTISAKNEDDFKKWEGWVGSRIKLLIQGIENATGGQMLAHPGTSRY 431
Query: 431 TDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQH 490
D E EN+ V+ ++ L V LNL ++
Sbjct: 432 KDP-------------------EKDENSH--VTLFLGLFPSSLKKKEEKVSLNLNPAVEQ 470
Query: 491 FTNAV-HW--QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKK 547
F V W +AT GM+ V+++K+K L + +K++ D K+
Sbjct: 471 FQMTVTSWMDRATGESNWVPGMQANVKYLKRKDLPSF-----VKEEIDGYVKDIYAPEKE 525
Query: 548 RKSDQALDELGDKSRPR---LDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLND 604
+K+ A DE S + L D+ + + E ED+S++Q+ LND
Sbjct: 526 KKAASAEDEEKKISEEKPLPLGDDTKAARKR------------KEMQEDDSITQLDSLND 573
Query: 605 SV 606
+
Sbjct: 574 DL 575
>gi|307107277|gb|EFN55520.1| hypothetical protein CHLNCDRAFT_23208 [Chlorella variabilis]
Length = 632
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/502 (39%), Positives = 278/502 (55%), Gaps = 43/502 (8%)
Query: 40 PNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVA 99
P DL+ TR+L + L+ + E+ EE R VL +L+ LVKEWI+ V+ + PP
Sbjct: 16 PTPQDLKHTRDLEQHLRDQGLYESQEEAELREVVLGRLDGLVKEWIRGVAALRGHPP--- 72
Query: 100 EKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSS----FFEKLKTVDEVTD 154
E KI+TFGSYRLGVH GADID LCV P + R D+F S L + EV
Sbjct: 73 EDANAKIFTFGSYRLGVHGPGADIDTLCVGPSYATREGDFFGSEPHCLQAMLCALPEVLA 132
Query: 155 LRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCR 214
LRAV A+VPV++M F GI ID+L+ARL++ + +D+D+ L++ D + VRSLNGCR
Sbjct: 133 LRAVTAAYVPVMEMKFCGISIDLLYARLSVPLVREDLDIGATHTLRHCDDQSVRSLNGCR 192
Query: 215 VTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAA 274
VTD ILR VP++ +FR ALR +KLWA++ G+YSNV GYLGGV+WA+LVA +C+L P A
Sbjct: 193 VTDMILREVPSVPHFRTALRCLKLWAERRGVYSNVTGYLGGVNWAILVAYVCKLQPCLLA 252
Query: 275 S------TLVCKFFLVFSQWKWPQPVLLKKPD-NVNLGFPVWDPRVNVADRYHLMPIITP 327
S V+SQW WP P++L+ + + +L PVWDPR N DR HLMPIITP
Sbjct: 253 SPPHLGPAPCLPVPQVYSQWAWPTPIMLRAIERDPSLAMPVWDPRENPRDRTHLMPIITP 312
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIY----NGKTMWDKLFETPNFFTKYRHY 383
AYP NS++NVS T +M EEF++G + I +G T W +L E FF ++H+
Sbjct: 313 AYPCMNSSYNVSECTLAVMAEEFRRGDEVCGRIMTHNGSGLTDWAQLLEPLPFFEGFKHF 372
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGS 443
L + + S ED W G + S++R L I + + G
Sbjct: 373 LQVEVMASSQEDFEVWEGWVHSRMRLL---------IKVDQQQQQQQQQQDGGGGGSVAD 423
Query: 444 PEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSK 503
P + + +F+GL A +I D+ N + + +
Sbjct: 424 PPAQQQPR---------------CFYFMGLSKKKAMIIPQSKVDLTQPVNEFAHKVKEFE 468
Query: 504 MMKDGMKIEVRHVKKKQLSEYL 525
++GM I VRH+ ++QL E++
Sbjct: 469 QRREGMDISVRHLLQRQLPEWV 490
>gi|301118192|ref|XP_002906824.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 691
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/445 (39%), Positives = 266/445 (59%), Gaps = 14/445 (3%)
Query: 34 ALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKN 93
A+ +PP DL+++ +L + + +E+D ++ R +L++L ++ + W+K+V + K
Sbjct: 19 AIRTTPPEPKDLEQSAKLQTYMDEHFPTESDANITRRSLILAELRSIFRAWVKQVCMEKG 78
Query: 94 IPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVT 153
+P +A GG+I GSYRLGV+ GADID +CVAPRHV R D+FSS E +V+
Sbjct: 79 VPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSSLKEIFLKHPKVS 138
Query: 154 DLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGC 213
L A+E A VP+I +++ I ID+ A L IP+++++ DD +L +D +SLNG
Sbjct: 139 QLVAIEGAIVPLITFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGP 198
Query: 214 RVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA 273
RVT+ +++L PN E+F LR ++ WAK+ G+YSN +GYLGGV+W +LV I QLYP AA
Sbjct: 199 RVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAA 258
Query: 274 ASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQN 333
STL+ +FF+V + WKWP + L K + LG VW+ +RY +MPI+TPAYP N
Sbjct: 259 PSTLLLRFFMVLNNWKWPLAIQLCKTHDAKLGLEVWNANAG-HNRYQVMPILTPAYPSMN 317
Query: 334 STFNVSISTRTIMQEEFKQGKTISEDIYN-GKTMWDKLFETPNFFTKYRHYLVLIASSVS 392
S+FNVS + T+M+EEFK+G TI +D+ + G + W LFE FF ++HYL + +
Sbjct: 318 SSFNVSTHSLTVMKEEFKRGLTIVQDVLSKGGSEWGPLFEPSEFFAVHQHYLAVEVYTEK 377
Query: 393 AEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKE 452
+++ WC ES++R L+ +L NP + V YT + +G E
Sbjct: 378 QDEEQAWCSFCESRMRKLVESLAYNPALCRLRV----YTKKFSLSYVTAG------EAPV 427
Query: 453 EGGENTSPPV--SGVASMWFIGLDF 475
G N PP S + +++G D
Sbjct: 428 GGQSNGQPPAQPSKFGACFYVGFDI 452
>gi|452986896|gb|EME86652.1| hypothetical protein MYCFIDRAFT_49534 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 190/540 (35%), Positives = 302/540 (55%), Gaps = 47/540 (8%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+++ L+ +PP++ D + L LK N E+ EE + R VL KL L+++ +++V
Sbjct: 9 FGVSSPLSTAPPSRQDTELGETLLTELKAQNNFESPEETAKRNSVLQKLQKLLQKLVQDV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
K + P + ++ GGKI+T+GSYRLGV+ G+DID+L VAP+HV R D+F ++
Sbjct: 69 GKKKGMSPELLKEAGGKIFTYGSYRLGVYGPGSDIDSLMVAPKHVSRDDFFERMPGMIRA 128
Query: 149 V---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+E+T++ V A VP+IK G++ID++FA L IP ++DL D LL+ LD
Sbjct: 129 TFKPEEITEMVVVAAAAVPIIKTKLMGVDIDLIFANLQRDSIPTNLDLGDTNLLRGLDDT 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
++ +NG RVTD IL LVP FR+ALR +KLWA+K +Y + Y GGV++ M+VAR+
Sbjct: 189 DLKCVNGTRVTDRILTLVPQTRIFRIALRAVKLWAQKRAVYGAIACYPGGVAYGMIVARV 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYPNAAA +V KFF + W WP P+ L+ + LG WDP N D+ HLMP+I
Sbjct: 249 CQLYPNAAAPKIVQKFFWLLHTWAWPSPIYLQAREKGPLGKTEWDPTTNPGDKRHLMPVI 308
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT-KYRHYL 384
TPAYP NST ++ ST ++++E +G+ I +IY GK W LF FF+ Y+HY+
Sbjct: 309 TPAYPCMNSTHTITPSTMAVLKKESDRGEKIMNEIYEGKRPWKDLFAKHTFFSDAYQHYI 368
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNP---------ECYT--DT 433
+I ++ + + Q W GL++S+V+ L+ +E++ ++ V P EC + D
Sbjct: 369 CIITAARTKDAQQAWSGLVQSRVKRLLAGIEQSDADSVKLVQPFNKGIARRHECKSEADI 428
Query: 434 TGVIANG---------------SGSPEITAEGKEEGGENTSPPVSG--------VASMW- 469
+A G ++ A +++G + G + +W
Sbjct: 429 EKTLAGGLECQVGESKTADQSAEVKAQVAAHEEDDGSTLANAAADGTTIEKKDNITEIWT 488
Query: 470 ---FIGLDFIAANVILNLTYDIQHFTNAV-HWQATQSKMMKDGMKIEVRHVKKKQLSEYL 525
++G++ I L++++ IQ F V W SKM ++++HV+ QL + L
Sbjct: 489 TTFYLGIELIKGAKNLDISWPIQDFKRQVIDWDGYDSKM----HSVQIKHVRDYQLPDDL 544
>gi|389639278|ref|XP_003717272.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
gi|351643091|gb|EHA50953.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
Length = 616
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/403 (44%), Positives = 250/403 (62%), Gaps = 8/403 (1%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T +++ P + + Q T L L+ N E E R VL L + ++K V+
Sbjct: 8 GVTPPVSVHLPTEEEKQATDSLLAELRAQNSFEGPVETEKRFAVLRSLQEIADAFVKTVA 67
Query: 90 IAKNIPPTVAEK-VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
K V K GK++ +GS RLGV G+DID L VAPR+V R DYF F +
Sbjct: 68 RKKEPDNAVLIKDARGKVFAYGSLRLGVWGPGSDIDTLVVAPRYVTREDYFEHFPGLLVE 127
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDD--MDLRDDMLLKNL 202
+ + +TDL V +AFVP+IK F GI ID++F+R+A +K++P D +L D LL+ L
Sbjct: 128 MAPPNAITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGL 187
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D+K +RS+NG RVTDEI+ LVP FR ALR IKLWA++ IY N++G+ GGV+WAMLV
Sbjct: 188 DEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLV 247
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR+CQLYP A AS +V KFF + +W WPQPVLLK ++ L +W+P++ DRYHLM
Sbjct: 248 ARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLM 307
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YR 381
PIITPAYP +TFN++ S++ ++ E + ++ I GK W LF+ FFTK ++
Sbjct: 308 PIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFK 367
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+Y+ +IA+S E W G +ESKVR L+ LER+ I +A
Sbjct: 368 YYIQVIAASKDKESHKLWSGFVESKVRLLVQGLERHESIAVAR 410
>gi|440468857|gb|ELQ37991.1| Poly(A) polymerase pla1 [Magnaporthe oryzae Y34]
Length = 611
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/403 (44%), Positives = 250/403 (62%), Gaps = 8/403 (1%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T +++ P + + Q T L L+ N E E R VL L + ++K V+
Sbjct: 8 GVTPPVSVHLPTEEEKQATDSLLAELRAQNSFEGPVETEKRFAVLRSLQEIADAFVKTVA 67
Query: 90 IAKNIPPTVAEK-VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
K V K GK++ +GS RLGV G+DID L VAPR+V R DYF F +
Sbjct: 68 RKKEPDNAVLIKDARGKVFAYGSLRLGVWGPGSDIDTLVVAPRYVTREDYFEHFPGLLVE 127
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDD--MDLRDDMLLKNL 202
+ + +TDL V +AFVP+IK F GI ID++F+R+A +K++P D +L D LL+ L
Sbjct: 128 MAPPNAITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGL 187
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D+K +RS+NG RVTDEI+ LVP FR ALR IKLWA++ IY N++G+ GGV+WAMLV
Sbjct: 188 DEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLV 247
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR+CQLYP A AS +V KFF + +W WPQPVLLK ++ L +W+P++ DRYHLM
Sbjct: 248 ARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLM 307
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YR 381
PIITPAYP +TFN++ S++ ++ E + ++ I GK W LF+ FFTK ++
Sbjct: 308 PIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFK 367
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+Y+ +IA+S E W G +ESKVR L+ LER+ I +A
Sbjct: 368 YYIQVIAASKDKESHKLWSGFVESKVRLLVQGLERHESIAVAR 410
>gi|444722668|gb|ELW63351.1| Poly(A) polymerase gamma [Tupaia chinensis]
Length = 554
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 152/204 (74%), Positives = 179/204 (87%)
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ +V++ +AVE+AFVPVIK FDGIEID++FARLA++ I D++DLRDD L++LD +C+R
Sbjct: 75 ISDVSESKAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 134
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 135 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 194
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 195 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 254
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQ 352
YPQQNST+NVS STRT+M EEFKQ
Sbjct: 255 YPQQNSTYNVSTSTRTVMVEEFKQ 278
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 483 NLTYDIQHFTNAV--------HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
N TY++ T V + QA M+K+GMKIE HVKKKQL YLPA +L+K K
Sbjct: 259 NSTYNVSTSTRTVMVEEFKQVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 318
Query: 535 KTKSGDQNTSAKKRKSDQA 553
K D N S+ +S ++
Sbjct: 319 KQSLSDVNRSSGGLQSKRS 337
>gi|84999896|ref|XP_954669.1| polyA polymerase [Theileria annulata]
gi|65305664|emb|CAI73989.1| polyA polymerase, putative [Theileria annulata]
Length = 512
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/402 (43%), Positives = 253/402 (62%), Gaps = 11/402 (2%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIK-E 87
YG+T ++ P D++ +REL LK YN+ ETDE R ++L LN L++++++ +
Sbjct: 13 YGITDPVSNEGPTNNDIKASRELLNLLKSYNLYETDEGKKRREDILESLNRLLQQFVRRQ 72
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
I + + A +V GK+ TFGSYRLG+ +DID LC+ PR V R +FS F+ L
Sbjct: 73 AKINRGLTDQEASQVSGKLLTFGSYRLGIVAPDSDIDVLCLCPRSVTRESFFSDFYNTLT 132
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
V+ ++ L+ V +A+ PVIK+ F I ID+LFA L + +++ DD +L+N++ V
Sbjct: 133 KVEGISKLQPVPDAYTPVIKLYFYEISIDILFANLDAPTVSPHINVLDDNILRNMNDSTV 192
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RS+NGCRV IL VPN FR LR IKLWA + IYS V+GYLGGV+WA+L AR+CQ
Sbjct: 193 RSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQ 252
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLL---KKPDNVN--LGFPVWDPRVNVADRYHLM 322
LYPN A + L+ KFF VFS W+W PV L K+P N+ + F VWDPRVN DR+HLM
Sbjct: 253 LYPNCAPNQLIEKFFRVFSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLM 312
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTI--SEDIYNGKTMWDKLFETPNFFTKY 380
PIITPA+P NST NV+ +T+ ++ EE + I + ++ N + +W+K+ E + F+ Y
Sbjct: 313 PIITPAFPSMNSTHNVTATTKKVITEELMRALEIFKTPNLSNLE-LWEKVLEEQDVFSNY 371
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLER--NPHI 420
+H+LV+ + +W G I S++R LI LE N HI
Sbjct: 372 KHFLVIEVYGSTEHAHGKWEGWIGSRMRFLISRLENLGNTHI 413
>gi|71031845|ref|XP_765564.1| poly(A) polymerase [Theileria parva strain Muguga]
gi|68352521|gb|EAN33281.1| poly(A) polymerase, putative [Theileria parva]
Length = 507
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 197/517 (38%), Positives = 294/517 (56%), Gaps = 42/517 (8%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIK-E 87
YG+T ++ P DL+ +REL LK +N+ ET+E R ++L LN L++++++ +
Sbjct: 13 YGITDPVSHEGPTNNDLKASRELLNLLKSHNLYETEEGKKRREDILESLNRLLQQFVRRQ 72
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
I + + A +V GK+ TFGSYRLG+ +DID LC+ PR V R +FS F+ L
Sbjct: 73 AKITRGLTDQEASQVSGKLLTFGSYRLGIVAPDSDIDVLCLCPRSVTRESFFSDFYNTLN 132
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
VD ++ L+AV +A+ PVIK+ F I ID+LFA L + +++ DD +L+N++ V
Sbjct: 133 KVDGISKLQAVPDAYTPVIKLYFYDISIDILFANLDAPTVSPHINVLDDNILRNMNDSTV 192
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RS+NGCRV IL VPN FR LR IKLWA + IYS V+GYLGGV+WA+L AR+CQ
Sbjct: 193 RSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQ 252
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLL---KKPDNVN--LGFPVWDPRVNVADRYHLM 322
LYPN A + L+ KFF V+S W+W PV L K+P N+ + F VWDPRVN DR+HLM
Sbjct: 253 LYPNCAPNQLIEKFFRVYSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLM 312
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTI--SEDIYNGKTMWDKLFETPNFFTKY 380
PIITPA+P NST NV+ +T+ ++ EE + I + ++ N + +W+K+ E + F+ Y
Sbjct: 313 PIITPAFPSMNSTHNVTATTKRVITEELMRALEIFKTSNLTNVE-LWEKVLEEEDVFSNY 371
Query: 381 RHYLVL-IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIAN 439
+H+LV+ + S +W G I S++R LI LE ++ ++ P
Sbjct: 372 KHFLVIEVYGSNEHVAHNKWEGWIGSRMRFLISRLE---NLGNTYIRP------------ 416
Query: 440 GSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDI----QHFTNAV 495
I K E AS F I+ V + T DI Q F + +
Sbjct: 417 ------IPGFFKFEDDN------WDYASSAFFAFKVISGVVETSKTLDIRSSVQSFKDII 464
Query: 496 HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKK 532
+ + K +D + ++H+K QL +Y+ ++ KK
Sbjct: 465 NNWSDMEK-YRDQISFNIKHLKNNQLPDYVLSNKSKK 500
>gi|171686334|ref|XP_001908108.1| hypothetical protein [Podospora anserina S mat+]
gi|170943128|emb|CAP68781.1| unnamed protein product [Podospora anserina S mat+]
Length = 661
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/405 (41%), Positives = 258/405 (63%), Gaps = 10/405 (2%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ + P + + + + L E L+ E+ E +R +V+++L + ++K+
Sbjct: 6 YGVTPPISTALPTEAEKRMHQALHEELRAQGTFESRAETEARKKVIAQLEKITTAFVKKA 65
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
+ V E +G +++T+GSYRLGV+ G+DID L VAP+HV YF F +
Sbjct: 66 TAETQNSFMVREAIG-RVFTYGSYRLGVYGPGSDIDTLVVAPKHVTTEQYFRLFPPLLVE 124
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDM--DLRDDMLLKNL 202
+ +TDL V +AFVP+IK F GI ID++F + L +IP+D +L D+ LL+ L
Sbjct: 125 MAPPGAITDLTPVPDAFVPIIKFEFSGISIDLIFCSIKGLTQIPEDKSWNLTDNTLLRGL 184
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
+ VRSLNG RVTDEIL LVP F+LALR IKLWA++ IY+N++G+ GGV+WAMLV
Sbjct: 185 SENEVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAMLV 244
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPD-NVNLG-FPVWDPRVNVADRYH 320
AR+CQLYP A ++ +V KFF + +W WP PVLLK + N+++ PVW+P++ +DR H
Sbjct: 245 ARVCQLYPKATSAVVVNKFFHIMLKWPWPLPVLLKDIEYNISVTRAPVWNPKLYSSDRNH 304
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK- 379
MPIITPAYP +T N++ S++ ++ +E ++G ++E+I G+ W LF FFT
Sbjct: 305 RMPIITPAYPAMCATHNINRSSKVVIMQELEKGVQVTEEIMTGRAPWKALFTKHTFFTSD 364
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+R+YL +I+SS + + Q W G IES+VR L+ +E + I LA
Sbjct: 365 FRYYLTVISSSRTKDAQNVWSGFIESRVRVLVNKIENHAAIVLAR 409
>gi|325180233|emb|CCA14636.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 677
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 251/388 (64%), Gaps = 2/388 (0%)
Query: 34 ALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKN 93
A+ ++PP +DL+++++L + + + +E ++ R +L++L + ++W+K+V I K
Sbjct: 19 AIRVTPPEPIDLEQSKKLKDYMDKHFPTENMVNITRRSLILAELRTIFRDWVKQVCIRKG 78
Query: 94 IPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVT 153
+P +A GG I GSYRLGV+ GADID +CVAP+ + R D+F+S + +VT
Sbjct: 79 VPEEIAADAGGLILVSGSYRLGVNEPGADIDTICVAPQQITREDFFTSLKKIFMQHSKVT 138
Query: 154 DLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGC 213
+L A+E A VP++ +++ I ID+ A L IP+D+++ +D +L +D +SLNG
Sbjct: 139 NLNAIEGAVVPLLTFDYEEINIDLQIAILPRNTIPEDLNILNDQILVGVDAATEKSLNGP 198
Query: 214 RVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA 273
RVT+ +++L PN ++F LR ++ WAK+ G+YSN +GYLGGV+W +LV I QLYP AA
Sbjct: 199 RVTELMIKLTPNRDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAA 258
Query: 274 ASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQN 333
+TL+ +FF+V + WKWP + L K ++V LG VW+ V +RYH+MPI+TPAYP N
Sbjct: 259 PTTLLLRFFMVLANWKWPLAIQLCKTEDVKLGLEVWNANVG-NNRYHVMPILTPAYPSMN 317
Query: 334 STFNVSISTRTIMQEEFKQGKTISEDIYN-GKTMWDKLFETPNFFTKYRHYLVLIASSVS 392
S+FNVS + +M++EF++ I ++I N G WD LFE+ +FF +HYL + + +
Sbjct: 318 SSFNVSTHSLAVMKQEFERALKIVQEILNRGAVEWDPLFESSDFFAVQQHYLAVDVYTTN 377
Query: 393 AEDQLEWCGLIESKVRHLIGNLERNPHI 420
ED+ WC ES++R LI +L P +
Sbjct: 378 REDEQAWCSFCESRIRKLIESLAYIPML 405
>gi|452845518|gb|EME47451.1| hypothetical protein DOTSEDRAFT_69399 [Dothistroma septosporum
NZE10]
Length = 610
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 245/393 (62%), Gaps = 5/393 (1%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T G++ L+ P + DL+ + +L LK N E E R EVL KL L+KE +++
Sbjct: 7 TRGVSAPLSTDSPTERDLKLSADLMTELKAQNNFEPPEATQKREEVLVKLEGLLKELVRK 66
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
V +K +P + ++ GGKI+T+GSYRL V G+DIDAL +APRHV R D+F + ++
Sbjct: 67 VGKSKGLPEEILQQAGGKIFTYGSYRLKVFGPGSDIDALMIAPRHVTREDFFKYMPDMIR 126
Query: 148 T---VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQ 204
+++T+L VE A VP+IK DG+ +D++F+ L + +P D+ L+D LL+ L +
Sbjct: 127 QSTPTEQLTELVPVEAANVPIIKTEIDGVAVDLIFSTLHMASVPKDLQLKDSNLLRGLSE 186
Query: 205 KCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVAR 264
+R +NG RVTD +L+LVP + FRLALR IKLWA + G+Y NV G+ GGV +AM+V R
Sbjct: 187 TDLRCVNGTRVTDRLLQLVPETKTFRLALRAIKLWASRRGVYGNVYGFPGGVGYAMMVVR 246
Query: 265 ICQLYPNAAASTLVCKFFLVFSQWKWPQPV-LLKKPDNVNLGFPVWDPRVNVADRYHLMP 323
+CQLYP AAA +V KFF+V +W+WP PV L K+ +LG V N ++ MP
Sbjct: 247 MCQLYPRAAAPVIVNKFFMVMGKWRWPDPVTLCKREPAPDLGHYVAQWPENPWEKADKMP 306
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRH 382
IITP +P N+T ++ S ++ EF++ I+ DI+NGK W LF FFT+ Y+H
Sbjct: 307 IITPVFPCMNATGGLTASNLEVILREFQRALKITNDIHNGKQEWQALFARQTFFTEDYKH 366
Query: 383 YLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
YL L+ S + E Q W G + S++R L+ ++E
Sbjct: 367 YLCLVTGSRTKEAQQAWSGFVSSRLRKLVSSIE 399
>gi|399218218|emb|CCF75105.1| unnamed protein product [Babesia microti strain RI]
Length = 501
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/410 (42%), Positives = 253/410 (61%), Gaps = 7/410 (1%)
Query: 18 DGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
DG + V YG++T++ L P D++ +L L+ N+ ET++ L R +L+ L
Sbjct: 3 DGMEKKSEGVMYGVSTSITLDGPTPEDIEANEQLLTLLRSLNLFETEKGLRKRELILASL 62
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
N L+ +I V I + + A V ++ TFGSYRLGV +DIDALC+ P+ + R D
Sbjct: 63 NRLLHNFIHSVCIMQGLDEDDANDVSARLLTFGSYRLGVIGPDSDIDALCLCPQRITRND 122
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+ F++ L V+ + AV +A+ P+IK+ +D I+ID+LFA L + I ++ + DD
Sbjct: 123 FFTVFYDILANHPNVSKIHAVADAYTPLIKLVYDDIDIDILFAILPIPTISPNLSILDDD 182
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+L+NLD RS+NGCRV +L VPN NFR LR IKLWA+K GIYSN+LGYLGGV+
Sbjct: 183 ILRNLDDITARSINGCRVASLVLSSVPNEHNFRNTLRFIKLWAQKRGIYSNILGYLGGVA 242
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVL---LKKPDNVN--LGFPVWDPR 312
WA+L AR+CQLYPN + ++ KFF V+ W W PV+ +K+P NV + F VWDP+
Sbjct: 243 WAILTARVCQLYPNYLPNQIIHKFFKVYMLWNWKYPVVINKIKQPVNVPGLMMFKVWDPK 302
Query: 313 VNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFE 372
N DR HLMPIITPA+P NST NV+ +T+ +M EFK+ + + + W+ L E
Sbjct: 303 TNPQDRLHLMPIITPAFPAMNSTHNVTNTTKRVMINEFKRAHELLKT--QSQMTWNDLLE 360
Query: 373 TPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL 422
N F +++H+LV+I + + +W G IES++R LI LE H L
Sbjct: 361 PANIFNEFKHFLVIIVVASDEKAHSKWHGWIESRIRFLIRKLEAIEHTEL 410
>gi|367027594|ref|XP_003663081.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
gi|347010350|gb|AEO57836.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
Length = 654
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/409 (42%), Positives = 255/409 (62%), Gaps = 16/409 (3%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++ + P + + + L + L+ E+ E R EVL +L + +++
Sbjct: 6 YGVTPPISTALPTEEEKRLNNALHQELRAQGTFESPAETEKRKEVLRQLEKITNVFVQRA 65
Query: 89 SIAKNIPPTVAEKVG-GKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
+ K T+ + G+++T+GSYRLGV+ G+D+D L VAP++V YF F E L
Sbjct: 66 AAEKEPKNTILIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQYFRIFPEVLV 125
Query: 148 TV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMD--LRDDMLLKN 201
+ +TDL V EAFVP+IK F GI ID++F + LK++P D + L D+ LL+
Sbjct: 126 EMAPPGAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPADKNWSLADNNLLRG 185
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
L + VRSLNG RVTD+IL LVP F+LALR IKLWA++ IY+N++GY GGV+WAML
Sbjct: 186 LSENEVRSLNGTRVTDDILNLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAML 245
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP-----VWDPRVNVA 316
VAR+CQLYP A ++ +V KFF + +W WP PVLLK ++ G P VW+P++ +
Sbjct: 246 VARVCQLYPKATSAVIVNKFFHIMLKWPWPLPVLLK---DIEYGCPVTRVAVWNPKIYAS 302
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DR H MPIITP+YP +T NV S+ ++++E ++G ++EDI GK W LF F
Sbjct: 303 DRNHRMPIITPSYPSMCATHNVGRSSMAVIKDELEKGVQVTEDIMRGKRPWKDLFTKHTF 362
Query: 377 FTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
FT +R+YL +I+SS + + Q W G +ES+VR L+ LE +P I+LA
Sbjct: 363 FTSGFRYYLTVISSSRTKKAQNVWSGFVESRVRLLVNKLEMHPSISLAR 411
>gi|429328821|gb|AFZ80581.1| poly A polymerase, putative [Babesia equi]
Length = 523
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/534 (35%), Positives = 295/534 (55%), Gaps = 40/534 (7%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIK-E 87
YG+T + P+ DL+ + E+ LK YN+ ETDE R VL LN L++++++ +
Sbjct: 13 YGITEPVTTQGPSNDDLKASEEITALLKSYNLFETDEGKQRRELVLEALNRLLQQFVRRQ 72
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
+ I + A + GK+ TFGSYRLG+ +DID LC+ P+ V R +FS F+ L
Sbjct: 73 AKKNQGISESEANTISGKLLTFGSYRLGIVAPDSDIDVLCLCPKCVTRESFFSDFYISLT 132
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
V+ ++ L+AV +A+ PVIK+ + I ID+LFA L + + ++++ DD +L+N++ V
Sbjct: 133 KVEAISKLQAVPDAYTPVIKLCYYDISIDILFANLDARTVNPNINVLDDNILRNMNDSTV 192
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RS+NGCRV IL VPN NFR+ LR IKLWA + IYS V+GYLGGV+WA+L AR+CQ
Sbjct: 193 RSINGCRVASFILDSVPNKANFRMTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQ 252
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN-----LGFPVWDPRVNVADRYHLM 322
LYPN + L+ KFF V+S W W PV L K V + F VWDP+ N DR HLM
Sbjct: 253 LYPNYVPNQLIEKFFRVYSLWNWKIPVTLCKIKQVPNLPGFMSFKVWDPQNNPHDRQHLM 312
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM-WDKLFETPNFFTKYR 381
PIITPA+P NST NV+ +T+ +M +E K+ + I + K + + E + F+ Y+
Sbjct: 313 PIITPAFPSMNSTHNVTATTKRVMTDELKRARDILKSPNTPKNQLLELVLEEEDIFSSYK 372
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGS 441
H+L++ S +W G I S++R LI LE P+ + + + + S
Sbjct: 373 HFLIIEVYGASEHAHGKWEGWIGSRMRFLIKKLENLPNTQIRPLPGFFKFEDSEWEYASS 432
Query: 442 GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVH-WQAT 500
+ ++ G+ + +L++ IQ F + ++ W T
Sbjct: 433 AFFALKCLSNDKSGQGSK---------------------VLDIRSSIQSFKDIINGW--T 469
Query: 501 QSKMMKDGMKIEVRHVKKKQLSEYLPA---------HMLKKDKKTKSGDQNTSA 545
+ +KD +K+ +RHVK QL +Y+ A L+K K+ +GD +S+
Sbjct: 470 DMENLKDQIKVNIRHVKSSQLPDYVQAKNSKKRPLDEQLEKSKRVCTGDSKSSS 523
>gi|403337557|gb|EJY68000.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 575
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 187/432 (43%), Positives = 258/432 (59%), Gaps = 17/432 (3%)
Query: 2 TFTQHSNSMQTSKPHQDGKPQSQA-PVTYGMTTALNLSPPNQLDLQRTRELAECLK-PYN 59
T T S S + Q G + P+T L D ++++ E LK +N
Sbjct: 4 TATGSSVSTTAQQQKQIGSAATATEPITTNFERRYYLEKSTYEDTLESKQIVEILKNDFN 63
Query: 60 VSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHK 119
E++ + R +L KLN ++ EWI+ V + + GGKI+TFGSYRLGVH
Sbjct: 64 QYESEGDRKKRDAILGKLNQIIVEWIQNVGKREGKDDDTVKNSGGKIFTFGSYRLGVHSP 123
Query: 120 GADIDALCVAPRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDML 178
DIDALCVAPRH++R +F + LK V L V+EA+VPVI M F+G+EID+L
Sbjct: 124 DTDIDALCVAPRHIERTRHFFGELSDILKNHPGVQKLTEVQEAYVPVINMVFEGVEIDLL 183
Query: 179 FARLALKEIPDDM-DLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIK 237
FAR+ LKE+ ++ +L DD +L+N D++ +RSLNGCRVTD IL+LVPN E+FR LR IK
Sbjct: 184 FARVELKEVGQELVNLLDDNILRNCDKESIRSLNGCRVTDSILQLVPNQESFRTTLRVIK 243
Query: 238 LWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKW--PQPVL 295
LWAK GIYSNV+G+LGGV+WA+LVA IC PN + L+ FF ++QW+W P+L
Sbjct: 244 LWAKVRGIYSNVMGFLGGVAWAILVANICITCPNLEPNKLLNYFFKAYTQWEWNYQNPIL 303
Query: 296 LK--KPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQG 353
L K D ++ F + + LMPIITPA+P N+TFNVS ST+ M EF++G
Sbjct: 304 LTEIKNDRNSVNFTIEADLFYEEKQTDLMPIITPAFPSMNATFNVSHSTKRAMLIEFEKG 363
Query: 354 KTISEDIY----NGKTM-----WDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIE 404
I+E + +G + W +LF+ NFF Y H++ + S SAED +W G IE
Sbjct: 364 LKITEALLARNEDGSKLHQEMNWRRLFKKFNFFKSYVHFIQIQILSKSAEDHKKWTGFIE 423
Query: 405 SKVRHLIGNLER 416
SK+R L+ LE+
Sbjct: 424 SKIRKLLQQLEK 435
>gi|221057822|ref|XP_002261419.1| putative poly(a) polymerase pap (poly(a) polymerase pap [Plasmodium
knowlesi strain H]
gi|194247424|emb|CAQ40824.1| putative poly(a) polymerase pap (poly(a) polymerase pap, putative
[Plasmodium knowlesi strain H]
Length = 637
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 200/539 (37%), Positives = 293/539 (54%), Gaps = 69/539 (12%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG++ ++L+ P + DL++ ++ E LK YN+ ET+ L R VL +N L E++ E+
Sbjct: 90 YGVSDPISLNYPTEEDLRKGNDVVELLKSYNLYETEHALKKRERVLGMINKLFHEFVVEI 149
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
SI++ I A+ + G +YTFGSYRLGV +DID + +AP+++ R +F+ F+ KL+
Sbjct: 150 SISQGINEEDAKHIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITREIFFNEFYLKLQQ 209
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPD-DMDLRDDMLLKNLDQKCV 207
V L+A+ E + P+I+ +D ++ID+L A L + + D L +D +LKNLD+ V
Sbjct: 210 DKNVRKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEVTV 269
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RV D IL VP+ ++FR LR IKLWAK GIYSN+LG+LGG+SWA+L A+ICQ
Sbjct: 270 RSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKICQ 329
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLK---KPDNVN--LGFPVWDPRVNVADRYHLM 322
LYPN S L+CKFF V+S W W PVL++ K +NV+ F VWDP N+ D+ H+M
Sbjct: 330 LYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNNVDGLRNFSVWDPEKNIKDKLHVM 389
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGK--------------TISEDIYNG----- 363
PIITPA+P NST NV+ TR+I+ +EFK+ T + NG
Sbjct: 390 PIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGVVTPV 449
Query: 364 -----------KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIG 412
+W + + + F Y+H+L + + S W G IESK+R L
Sbjct: 450 SAPSSSTTSSSSNIWTNILQPLDLFGTYKHFLHIQIMATSELIYNSWKGWIESKIRLLFK 509
Query: 413 NLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIG 472
LE IN + P P+ K++ S +FI
Sbjct: 510 KLET---INELKIRP---------------YPKFYVYQKDK---------FDYCSSFFIA 542
Query: 473 LDFIAANV---ILNLTYDIQHFTNAV-HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPA 527
L F NV NL+Y I+ F + V +W Q + KI + + KK Q+ E+L +
Sbjct: 543 LVFFLKNVYDNTFNLSYAIRDFIDIVLNW--PQKSKYPNSYKINISYQKKSQVLEFLAS 599
>gi|167536365|ref|XP_001749854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771569|gb|EDQ85233.1| predicted protein [Monosiga brevicollis MX1]
Length = 604
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 203/562 (36%), Positives = 305/562 (54%), Gaps = 84/562 (14%)
Query: 45 LQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAK-NIPPTVAEKVG 103
++ T+ L L+P V +TDE + R VLSKLN LV+ W+K+ S + N A +V
Sbjct: 1 MEDTKALEAALEPEGVIDTDENMQQRCLVLSKLNELVQAWVKKASKEEYNFEEEAANQVD 60
Query: 104 GKIYTFGSYRLGVHHK----------------GADIDALCVAPRHVDRADYFSSFFEKLK 147
+++TFGSYRLGV + DID L P H+ R +F +F++ LK
Sbjct: 61 ARLFTFGSYRLGVQSRYDMSSIQLFQMQFSRDAGDIDTLLCFPHHIKRESFFGTFYQLLK 120
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRD-DMLLKNLDQKC 206
VTDL A E AFVPVIK+ DG+E+D+LFA L + + + L+D D+L K + +
Sbjct: 121 ETPGVTDLHAAEGAFVPVIKLAMDGVELDLLFASLPVDRLEPTLSLQDVDLLKKIHEDEI 180
Query: 207 VRSLNGCRVTDEILRLVP-NIENFRLALRTIKLWAKKH-------------GIYSNVLGY 252
+RS+NGCRV D +L ++P N++ FR ALR +KLWAK + G+YSNV GY
Sbjct: 181 MRSINGCRVADAVLEVMPSNLQTFRTALRAVKLWAKHNLTRSNQTVRTSGRGVYSNVHGY 240
Query: 253 LGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQW-----------------KW-PQPV 294
GG+ +LV RICQLYPNAAAST++CKFF V+S W +W P+
Sbjct: 241 FGGIHLVILVTRICQLYPNAAASTILCKFFRVYSDWYGSNWIKHAREIWLAHGEWMNSPI 300
Query: 295 LLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGK 354
+K D+++LG WDPR N DRY LMPIITP YPQQN+ FNV+ ST + EF +G
Sbjct: 301 KIKDVDDLHLGKRQWDPRSNPRDRYDLMPIITPVYPQQNAAFNVNESTLHRIVTEFSRGH 360
Query: 355 TISEDIYNGKTM--WDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIG 412
+ +DI + W ++E FF +Y++++ ++AS+ + D+ E+ GL+ES VRHL+
Sbjct: 361 RVCQDIMRASSNVPWSAVWEPIRFFDEYQYFVRVVASAATESDRTEFEGLVESTVRHLVL 420
Query: 413 NLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIG 472
NL+ ++ A P+ Y + +A+ ++G E T+ P + W++
Sbjct: 421 NLQYTDNVAYAMAYPKAYHEDP--VAD------------KDGTEATTGPWR---TAWYLA 463
Query: 473 LDF--------IAANVILNLTYDIQHFTNAVH-WQATQSKMMKDGMKIEVRHVKKKQLSE 523
L+F A L+L + F + T S+ + M ++V+ +K+ +L
Sbjct: 464 LEFGIKQEGRIEPAPSKLDLQGPLVAFYGRLRDRTVTMSRYDETTMNVDVQAMKQSKLPG 523
Query: 524 YL------PAHMLKKDKKTKSG 539
YL P ++ K+T G
Sbjct: 524 YLYPGGVNPHRKVRLRKRTPFG 545
>gi|449296009|gb|EMC92029.1| hypothetical protein BAUCODRAFT_78629 [Baudoinia compniacensis UAMH
10762]
Length = 594
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 240/403 (59%), Gaps = 4/403 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T + P DL+ L LK + + R V++KL L+++ ++ V
Sbjct: 7 WGVTQPFSNDAPTPADLKLNDSLIAELKAQDNFPPSSDTERRDAVIAKLKGLLRQMVQIV 66
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFS---SFFEK 145
K +P + E GG++YT+GS+RLGV+ +D+D L VAP+HV R ++F K
Sbjct: 67 GKKKGLPAGILETAGGEVYTYGSFRLGVYGPNSDVDTLMVAPKHVTREEFFEYMPDLLRK 126
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
E+T+L V P+IK+ G++ID++F L ++ +PD MDL DD LL+ LD
Sbjct: 127 SAAPGEITELVPVPGIGTPIIKLKIQGVDIDLIFCSLQVQSVPDKMDLADDNLLRGLDDT 186
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
VR +NG RVT+ IL+LVP + FR ALR IKLWA++ IY N++GY GGV+WA+LVAR+
Sbjct: 187 DVRCVNGTRVTNRILQLVPQTKTFRYALRAIKLWAQRRAIYGNIVGYPGGVAWAILVARV 246
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYP A A +V +FF + +W WP+PV L+ +L WDP + D HLMPI+
Sbjct: 247 CQLYPKAVAPLIVQRFFFIVKRWNWPKPVFLQHKVESSLVIREWDPNTSRHDAGHLMPIL 306
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF-TKYRHYL 384
TPA P N+ V ST+ +M E ++G+ I DIY+ W LFE NFF T Y+HY+
Sbjct: 307 TPAVPSTNTAHTVGPSTKMVMMRELERGEQIIADIYSKSKPWKALFERHNFFTTAYKHYI 366
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNP 427
++ +S S + Q W GL++SK++ L+ +E + ++ V P
Sbjct: 367 CVVTASKSKDAQDAWAGLVQSKIKWLVQGIESSDANSIELVQP 409
>gi|367050218|ref|XP_003655488.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
gi|347002752|gb|AEO69152.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
Length = 652
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 173/407 (42%), Positives = 253/407 (62%), Gaps = 10/407 (2%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
TYG+T ++ + P + + + L + L+ E+ E R EVL++L + +++
Sbjct: 5 TYGVTPPISTALPTEQEKALNKALHDELRAQGTFESRAETEKRKEVLAQLEKITNAFVQR 64
Query: 88 VSIAKNIPPTVAEKVG-GKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
+ K+ + + G+++T+GSYRLGV+ G+D+D L VAP++V YF F E L
Sbjct: 65 AAREKHGKNAILIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQYFRIFPEVL 124
Query: 147 KTVD---EVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMD--LRDDMLLK 200
+ +TDL V EAFVP+IK F GI ID++F + L ++P D L D+ LL+
Sbjct: 125 VEMAPPAAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLIQLPADKSWSLADNNLLR 184
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
L + VRSLNG RVTDEIL LVP F+LALR IKLWA++ IY+N++GY GGV+WAM
Sbjct: 185 GLSENAVRSLNGTRVTDEILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAM 244
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK--KPDNVNLGFPVWDPRVNVADR 318
LVAR+CQLYP A ++ +V KFF + +W WP PVLLK + + PVW+P++ +DR
Sbjct: 245 LVARVCQLYPKATSAVIVNKFFNIMLKWPWPLPVLLKDIEYNGPVTRVPVWNPKLYASDR 304
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
H MPIITPAYP +T NV S+ ++Q+E K+G ++E+I G+ W LF FFT
Sbjct: 305 NHKMPIITPAYPSMCATHNVGRSSMVVIQQELKKGAEVTEEIMLGRRPWKDLFTKHTFFT 364
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+++YL +I+SS + + Q W G IES+VR L+ +E +P I LA
Sbjct: 365 SGFKYYLTVISSSRTKKAQNVWSGFIESRVRLLVNKIEMHPSIALAR 411
>gi|356511273|ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
max]
Length = 702
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/401 (42%), Positives = 250/401 (62%), Gaps = 19/401 (4%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++L P + D+ +TREL + L+ + E +E + EVL +L+ +VK W+K +S
Sbjct: 18 GITEPISLGGPTEYDVIKTRELEKYLQDAGLYENQQE--AVXEVLGRLDQIVKIWVKIIS 75
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSSFFEKLKT 148
AK + + ++ KI+TFGSY LGVH GA+ID LCV PRH R D+F L
Sbjct: 76 RAKGLNKQLVQEANAKIFTFGSYXLGVHSPGANIDTLCVGPRHASRDEDFFGDLHRMLSK 135
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EVT+L V +A VPV++ F+G+ ID+L+A+L+L+ IP+D+D+ +++L+N D++ V
Sbjct: 136 MPEVTELHPVPDAHVPVMRFKFNGVYIDLLYAKLSLRVIPEDLDISQELILQNADEETVC 195
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSN--VLGYLGGVSWAMLVARIC 266
SLNGCRVTD++L ++NF LR +K WAK G+Y V YLGG++WA+LVAR C
Sbjct: 196 SLNGCRVTDKVL-----LQNFCTTLRCMKFWAKHCGVYXKNFVTSYLGGINWALLVARTC 250
Query: 267 QLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIIT 326
L+PNA + LV +FF V++QW WP PV+L + ++G +WDPR DR+HLMPIIT
Sbjct: 251 XLFPNALPNMLVSRFFRVYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYPNDRFHLMPIIT 310
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVL 386
PAY NS++NVS T IM EEF++G I E W + P Y++YL +
Sbjct: 311 PAYACMNSSYNVSSITLCIMTEEFQRGNEICEYFAQDDLTWAFKLKFP-CSNSYKNYLQI 369
Query: 387 IASSVSAEDQLEWCGLIESKV--------RHLIGNLERNPH 419
S +A+D +W G +ES + RH+ G L+ +PH
Sbjct: 370 DISGENADDLRKWKGWVESHLRQLRLQIERHIYGMLQCHPH 410
>gi|164423119|ref|XP_959011.2| Poly(A) polymerase [Neurospora crassa OR74A]
gi|157069956|gb|EAA29775.2| Poly(A) polymerase [Neurospora crassa OR74A]
Length = 632
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/477 (40%), Positives = 271/477 (56%), Gaps = 41/477 (8%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T G+T ++ + P + ++T L + L+ E+ E R VL+ L + E++K
Sbjct: 7 TLGVTPPISTTLPTDAEKRQTEALLKELRAQGTFESQAETDKRWAVLADLQRITDEFVKR 66
Query: 88 VSIAKNIPPTV-AEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---F 143
+ K + G+I+T+GS+RLGV+ G+DID L V P++V YF F
Sbjct: 67 AAQEKEPHNAILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQYFDIFPNLL 126
Query: 144 EKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMD--LRDDMLLK 200
++ +TDL V EAFVP+IK + GI ID++F + +L+++PDD D L + LL+
Sbjct: 127 VEMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSNNLLR 186
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
L + VRSLNG RVTDEIL LVP + F+LALR IKLWA++ IY+N++GY GGV+WAM
Sbjct: 187 GLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAM 246
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPD-NVNLG-FPVWDPRVNVADR 318
LVAR+CQLYP A ++ +V KFF + W WP PVLLK + N ++ VW+P++ +DR
Sbjct: 247 LVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDR 306
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
H MPIITP+YP +T NV S+ ++Q+E ++G ISE+I GK W LFE FFT
Sbjct: 307 NHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKHTFFT 366
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNP---------E 428
++ YL +I+S + E Q W G +ES+VR L+ LE +P I LA P
Sbjct: 367 NGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLELHPSIALAR--PFNKGYDRVHR 424
Query: 429 CYTDT----------------TGVIANGSG----SPEITAEGKEEGGENTSPPVSGV 465
C TD T + ANGS E+ AE K E G P V V
Sbjct: 425 CKTDAQVEEIQTGNLTYMVKPTDIAANGSAKNDSKVEVKAEIKTEDGVAREPTVPAV 481
>gi|412986520|emb|CCO14946.1| predicted protein [Bathycoccus prasinos]
Length = 632
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 166/387 (42%), Positives = 243/387 (62%), Gaps = 17/387 (4%)
Query: 43 LDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKV 102
LD++RT+EL LK +V E+ E + R EVL +LN ++++WI+ S++K P E +
Sbjct: 25 LDIKRTKELDSLLKLEDVYESQSECTRREEVLGELNEMLQDWIRTRSLSKGHPD---ESI 81
Query: 103 GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA---------DYFSSFFEKLKTVDEVT 153
+YTFGSYRLGVH ADID+L + P+H+DRA D+ SF++ ++ +
Sbjct: 82 RCNLYTFGSYRLGVHGPAADIDSLVIGPKHIDRAEDFFGFEEDDFEGSFYDYMRKHEGTE 141
Query: 154 DLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMDLRDDMLLKNLDQKCVRSLNG 212
+ AV +A VP +K F G EID+ + L +P D+D+ +L LD V+SL G
Sbjct: 142 KIVAVPDAVVPELKTEFRGFEIDVAYCSLPGYSNVPLDLDVLSAKILHGLDDAGVKSLAG 201
Query: 213 CRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNA 272
CRV D +L+LV N +R+ALR ++LWA + G+YSNV+G+ GGV+ A+LVAR+CQLYPNA
Sbjct: 202 CRVADSLLKLVTNHSEYRIALRALRLWAARRGVYSNVVGFFGGVNLAILVARVCQLYPNA 261
Query: 273 AASTLVCKFFLVFSQWKWPQPVLLKK----PDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
+AS LV FF ++ W W PV+L P + G WD RVN +RY LM IITPA
Sbjct: 262 SASMLVYSFFQIWDNWVWTTPVMLTSLDIAPKDQIPGLRHWDERVNKPERYQLMKIITPA 321
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP QNSTFNVS ST +++ EFK+GK ++ + G+ W ++ FF KY+ YL LI
Sbjct: 322 YPAQNSTFNVSSSTLEVLKREFKRGKIVTGKVLIGEAKWTDVWSDVQFFAKYKTYLQLIV 381
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLE 415
++ + ED +W G + S++++L+ +E
Sbjct: 382 TADNEEDFKKWEGWVGSRLKNLVQGVE 408
>gi|83285836|ref|XP_729897.1| poly(A) polymerase III [Plasmodium yoelii yoelii 17XNL]
gi|23489018|gb|EAA21462.1| poly(A) polymerase III [Plasmodium yoelii yoelii]
Length = 613
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 203/563 (36%), Positives = 299/563 (53%), Gaps = 82/563 (14%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG++ ++L P + DL++ ++ E LK YN+ ET++ L R +VL +N L E++ E+
Sbjct: 81 YGVSDPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIEL 140
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
SI + I A+++ G +YTFGSYRLGV +DID + +AP+++ R +F+ F+ KL+
Sbjct: 141 SINQGINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNITREIFFNEFYLKLQQ 200
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDD-MDLRDDMLLKNLDQKCV 207
V L+A+ E + P+I+ +D ++ID+L A L + + D L +D +LKNLD+ V
Sbjct: 201 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCCYTLDNDYILKNLDEVTV 260
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RV D IL VPN +NFR LR IKLWAK+ GIYSN+LG+LGG+SWA+L A+ICQ
Sbjct: 261 RSLNGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKICQ 320
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNL----GFPVWDPRVNVADRYHLMP 323
+YPN S L+CKFF V+S W W PVL++ N+ F +WDP NV D+ H+MP
Sbjct: 321 IYPNYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMP 380
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTI---------------SEDIYN------ 362
IITPA+P NST NV+ TR+I+ EEFK+ +I E + N
Sbjct: 381 IITPAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDSNPDADISQVMEHVNNLMSHGN 440
Query: 363 -------GK--------------TMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCG 401
GK ++W + E + F Y+H+L + + W G
Sbjct: 441 AININNVGKSGDNENVNIHNNNSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKG 500
Query: 402 LIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPP 461
IESK+R L LE IN + P P+ K++
Sbjct: 501 WIESKIRLLFKKLET---INELKIRP---------------FPKFYTYKKDKF------- 535
Query: 462 VSGVASMWFIGLDFIAAN---VILNLTYDIQHFTNAV-HWQATQSKMMKDGMKIEVRHVK 517
S +FI L F N NL+Y I+ F + V +W Q + KI + + K
Sbjct: 536 --YYCSSFFIALIFFFKNPYDNTFNLSYAIRDFIDIVLNW--PQKNKYTNSFKINISYQK 591
Query: 518 KKQLSEYLPAHMLKKDKKTKSGD 540
Q+ ++L + + D K +GD
Sbjct: 592 VSQVLDFLSS--VSNDSKENNGD 612
>gi|68070217|ref|XP_677020.1| poly(A) polymerase PAP [Plasmodium berghei strain ANKA]
gi|56496967|emb|CAH94131.1| poly(A) polymerase PAP, putative [Plasmodium berghei]
Length = 626
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 201/570 (35%), Positives = 301/570 (52%), Gaps = 85/570 (14%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG++ ++L P + DL++ ++ E LK YN+ ET++ L R +VL +N L E++ E+
Sbjct: 81 YGVSDPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIEL 140
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
SI + I A+++ G +YTFGSYRLGV +DID + +AP+++ R +F+ F+ KL+
Sbjct: 141 SINQGINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNITREIFFNEFYLKLQK 200
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPD-DMDLRDDMLLKNLDQKCV 207
V L+A+ E + P+I+ +D ++ID+L A L + + D L +D +LKNLD+ V
Sbjct: 201 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTV 260
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RV D IL VPN +NFR LR IKLWAK+ GIYSN+LG+LGG+SWA+L A+ICQ
Sbjct: 261 RSLNGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKICQ 320
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNL----GFPVWDPRVNVADRYHLMP 323
+YPN S L+CKFF V+S W W PVL++ N+ F +WDP NV D+ H+MP
Sbjct: 321 IYPNYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMP 380
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTI--------------------------- 356
IITPA+P NST NV+ TR+I+ EEFK+ +I
Sbjct: 381 IITPAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDLNPDADIGQVMEHVNNLMSYGN 440
Query: 357 ------------SEDI---YNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCG 401
+E++ N ++W + E + F Y+H+L + + W G
Sbjct: 441 AININNVGKSGDNENVNIHNNSSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKG 500
Query: 402 LIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPP 461
IESK+R L LE IN + P P+ K++
Sbjct: 501 WIESKIRLLFKKLET---INELKIRP---------------FPKFYTYKKDKF------- 535
Query: 462 VSGVASMWFIGLDFIAAN---VILNLTYDIQHFTNAV-HWQATQSKMMKDGMKIEVRHVK 517
S +FI L F N NL+Y I+ F + V +W Q + KI + + K
Sbjct: 536 --YYCSSFFIALIFFFKNPYDNTFNLSYAIRDFIDIVLNW--PQKNKYINSFKINISYQK 591
Query: 518 KKQLSEYLPAHMLKKDK-----KTKSGDQN 542
Q+ ++L A + + + K ++ QN
Sbjct: 592 VSQVLDFLSAFQMIQRRIMEITKKRANSQN 621
>gi|405977000|gb|EKC41473.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 264
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 156/255 (61%), Positives = 203/255 (79%), Gaps = 3/255 (1%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T+ ++L P +DL+ + +L E ++P+ V E++EE+S RME+L+++N LV++WIK+VS
Sbjct: 9 GITSPISLEGPKLVDLKLSEKLEEAMRPHGVFESEEEMSHRMEILNRINTLVRKWIKDVS 68
Query: 90 IAKNIPPTVAEKV---GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
K+ + K+ GGK+ FGSYRLG H KGADID +C+AP HVDR+D+FSSF E L
Sbjct: 69 RQKSEINYLEYKINAFGGKVCIFGSYRLGAHTKGADIDTVCIAPGHVDRSDFFSSFVEVL 128
Query: 147 KTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKC 206
K EV DLRA+EEA+VP+IKM FDGIE+DM+FARL L +IPD++DLRD+ LL++L+ KC
Sbjct: 129 KHTPEVKDLRAIEEAYVPLIKMTFDGIELDMVFARLTLPQIPDEIDLRDESLLRHLNTKC 188
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARIC 266
VRSLNGCRVTDEIL LVPN NFR L IK+WAKK GIYS VLG+LGGVSWA+LVAR+C
Sbjct: 189 VRSLNGCRVTDEILHLVPNQHNFRRTLLAIKIWAKKKGIYSKVLGFLGGVSWAILVARVC 248
Query: 267 QLYPNAAASTLVCKF 281
QLYPNAA +TL+ KF
Sbjct: 249 QLYPNAAPATLLHKF 263
>gi|302846120|ref|XP_002954597.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
gi|300260016|gb|EFJ44238.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
Length = 410
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 172/392 (43%), Positives = 245/392 (62%), Gaps = 16/392 (4%)
Query: 35 LNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNI 94
LN +PP D + ++EL E L+ + E+ +E R EVL LV+ W+K V +N+
Sbjct: 15 LNDAPPTAEDKRHSKELEEFLRASGLYESLDEAILREEVLGLFYQLVQIWVKGVCRRRNL 74
Query: 95 PPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSSFFEK------LK 147
E +YTFGSYRLGVH G+D+D L V PR+V R D+F + EK L
Sbjct: 75 N---VEDARAHVYTFGSYRLGVHGPGSDMDTLVVGPRYVLREMDFFGN--EKHCLQYLLS 129
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
++TD++ V +AFVP+I + + G++ID+L+A LA+ +P+ +DL + +L+ D+ V
Sbjct: 130 QTPDITDIQPVPDAFVPMIGIKYKGVQIDVLYASLAMVTLPEQLDLSNHAVLRGCDEATV 189
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTD ILRLVPN + FRLALR +K WA GI SNV GYLGGV+ A++VA+ICQ
Sbjct: 190 RSLNGCRVTDTILRLVPNQDVFRLALRAVKHWASLRGISSNVTGYLGGVNLAIMVAKICQ 249
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYP A AST++ KFF++ W WP+ + L+ P++ ++G PVWDPR D LMP+ITP
Sbjct: 250 LYPRAEASTVLLKFFILLKAWPWPRAIHLRVPEDHSMGLPVWDPRPGTRDSLALMPVITP 309
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIY---NGKTM-WDKLFETPNFFTKYRHY 383
AYP NS +NV ST +M EF + G+ + WD+LF FFT++ Y
Sbjct: 310 AYPAMNSLYNVQRSTLEVMTAEFAAAAEVCTSFLRCRGGQPLDWDRLFMPVPFFTQHTFY 369
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
+ + S+ S +D + W G + S++R L+ NLE
Sbjct: 370 IQIEVSADSEQDLVLWDGWVSSRIRRLVRNLE 401
>gi|336470057|gb|EGO58219.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2508]
gi|350290251|gb|EGZ71465.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2509]
Length = 632
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/407 (42%), Positives = 251/407 (61%), Gaps = 10/407 (2%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T G+T ++ + P + ++T L + L+ E+ E R VL+ L + E++K
Sbjct: 7 TLGVTPPISTALPTDAEKRQTEALLKELRAQGTFESQAETDKRWAVLADLQRITDEFVKR 66
Query: 88 VSIAKNIPPTV-AEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---F 143
+ K + G+I+T+GS+RLGV+ G+DID L V P++V YF F
Sbjct: 67 AAQEKEPHNAILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQYFDIFPNLL 126
Query: 144 EKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMD--LRDDMLLK 200
++ +TDL V EAFVP+IK + GI ID++F + +L+++PDD D L + LL+
Sbjct: 127 VEMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSNNLLR 186
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
L + VRSLNG RVTDEIL LVP + F+LALR IKLWA++ IY+N++GY GGV+WAM
Sbjct: 187 GLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAM 246
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPD-NVNLG-FPVWDPRVNVADR 318
LVAR+CQLYP A ++ +V KFF + W WP PVLLK + N ++ VW+P++ +DR
Sbjct: 247 LVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDR 306
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
H MPIITP+YP +T NV S+ ++Q+E ++G ISE+I GK W LFE FFT
Sbjct: 307 NHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKHTFFT 366
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
++ YL +I+S + E Q W G +ES+VR L+ LE +P I LA
Sbjct: 367 NGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLELHPSIALAR 413
>gi|426246819|ref|XP_004017185.1| PREDICTED: poly(A) polymerase alpha-like, partial [Ovis aries]
Length = 244
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/205 (80%), Positives = 185/205 (90%), Gaps = 1/205 (0%)
Query: 97 TVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLR 156
+V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+F+SF++KLK +EV DLR
Sbjct: 17 SVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLR 76
Query: 157 AVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVT 216
AVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD LLKNLD +C+RSLNGCRVT
Sbjct: 77 AVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVT 136
Query: 217 DEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST 276
DEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVSWAMLVAR CQLYPNA AST
Sbjct: 137 DEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIAST 196
Query: 277 LVCKFFLVFSQWKW-PQPVLLKKPD 300
LV KFFLVFS+W+W P PVLL KPD
Sbjct: 197 LVHKFFLVFSKWQWHPTPVLLVKPD 221
>gi|384497599|gb|EIE88090.1| hypothetical protein RO3G_12801 [Rhizopus delemar RA 99-880]
Length = 500
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 245/406 (60%), Gaps = 29/406 (7%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T L+L P + D+ T+EL + L Y + +++E R VL L+ + K++++ V
Sbjct: 13 GITRPLSLEGPTEYDIHLTKELQKTLMLYGLYDSEETAKLREHVLKSLDEMTKKFVQFVY 72
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+ A K GGKI+T+GSYRLGV+ K ++
Sbjct: 73 ERQGFSKEQAVKAGGKIFTYGSYRLGVNAKASN--------------------------- 105
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
+++ D+ V +AFVPVIK + GI ID + ARL L+EI +D+DL+D +L+ LD +RS
Sbjct: 106 EQIKDITPVTDAFVPVIKFKYSGIPIDFVCARLNLEEISEDIDLKDPEILRGLDAHSIRS 165
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
+NG RV D+IL LVPN++ FR LR IKLWA + +YSNVLG+LGGV+WA+LVAR+CQLY
Sbjct: 166 INGTRVADDILSLVPNMDTFRATLRCIKLWATRKAVYSNVLGFLGGVAWAILVARVCQLY 225
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN--VNLGFPVWDPRVNVADRYHLMPIITP 327
P+A+ASTL+ KFF + + W WP PV+LK ++ W+P++N DR H MP+ITP
Sbjct: 226 PHASASTLISKFFHILTSWSWPSPVMLKAVEDGPAFANTKPWNPKLNPTDRSHRMPVITP 285
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
+YP +T NV+ ST+ I+ E KQ I + I G W +LFE +FF YR YL +
Sbjct: 286 SYPSMCTTHNVTQSTQRIITGEIKQAAKIVDKIMAGSAKWPQLFEAHSFFKMYRQYLQIT 345
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDT 433
+ + E QL+W GL+E+++R L+ LE + H + +++T
Sbjct: 346 VVADNYELQLKWTGLVEARLRQLVIKLEAIHSVMQVHPFMDGFSET 391
>gi|156101143|ref|XP_001616265.1| poly(A) polymerase PAP [Plasmodium vivax Sal-1]
gi|148805139|gb|EDL46538.1| poly(A) polymerase PAP, putative [Plasmodium vivax]
Length = 649
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 197/546 (36%), Positives = 291/546 (53%), Gaps = 76/546 (13%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG++ + L+ P + DL++ ++ E LK YN+ ET++ L R VL +N L E++ E+
Sbjct: 93 YGVSDPITLNYPTEEDLKKANDVVELLKSYNLFETEQALKKRERVLGMINKLFHEFVVEI 152
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
SI++ I A+ + G +YTFGSYRLGV +DID + +AP+++ R +F+ F+ KL+
Sbjct: 153 SISQGINEEDAKHIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITREIFFNEFYLKLQQ 212
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPD-DMDLRDDMLLKNLDQKCV 207
V L+++ E + P+I+ +D ++ID+L A L + + D L +D +LKNLD+ V
Sbjct: 213 DRNVRKLQSLPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEVTV 272
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RV D IL VP+ ++FR LR IKLWAK GIYSN+LG+LGG+SWA+L A+ICQ
Sbjct: 273 RSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKICQ 332
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN-----LGFPVWDPRVNVADRYHLM 322
LYPN S L+ KFF V+S W W PVL++ + N F VWDP N+ D+ H+M
Sbjct: 333 LYPNYNVSQLIGKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVM 392
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGK--------------TISEDIYNG----- 363
PIITPA+P NST NV+ TR+I+ +EFK+ T + NG
Sbjct: 393 PIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEANPGANVTFVMNQANGIVTPV 452
Query: 364 ------------------KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIES 405
+MW + + + F Y+H+L + + + W G IES
Sbjct: 453 SAPTTSSSTTGSGSIPGSGSMWTNILQPLDLFASYKHFLHIQIMATNELIYNSWKGWIES 512
Query: 406 KVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGV 465
K+R L LE IN + P P+ K++
Sbjct: 513 KIRLLFKKLET---INELKIRP---------------YPKFYVYKKDK---------FYY 545
Query: 466 ASMWFIGLDFIAANV---ILNLTYDIQHFTNAV-HWQATQSKMMKDGMKIEVRHVKKKQL 521
S +FIGL F NV NL+Y I+ F + V +W Q + KI + + KK Q+
Sbjct: 546 CSSFFIGLVFFLKNVYDNTFNLSYAIRDFIDIVLNW--PQKSKYPNSYKINISYQKKSQV 603
Query: 522 SEYLPA 527
E+L +
Sbjct: 604 LEFLAS 609
>gi|159489342|ref|XP_001702656.1| poly(a) polymerase [Chlamydomonas reinhardtii]
gi|158280678|gb|EDP06435.1| poly(a) polymerase [Chlamydomonas reinhardtii]
Length = 407
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 173/392 (44%), Positives = 242/392 (61%), Gaps = 16/392 (4%)
Query: 35 LNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNI 94
LN S P+ D + + EL + L+ + E DE+ R EVL L + W+K V KN+
Sbjct: 15 LNNSLPSAEDKRHSAELEQFLRDAGLYEPDEDAYLRQEVLGLFYELTQTWVKGVCRKKNL 74
Query: 95 PPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSSFFEK------LK 147
E +YTFGSYRLGVH GAD+D L V PR+V R +D+F S EK L
Sbjct: 75 N---VEDARAHVYTFGSYRLGVHGPGADMDTLVVGPRYVLRDSDFFGS--EKHCLEYMLS 129
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
++TD++ V +AFVP+I + + G++ID+L+A LA++ +P+ +DL + +L+ D+ V
Sbjct: 130 QTPDITDIQPVPDAFVPMIGIKYKGVQIDILYASLAMQTLPEQLDLSNHAVLRGCDEPTV 189
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
R+LNGCRVTD +L+LVP E FR ALR +K WA GI SNV GYLGGV+ A++VA+ICQ
Sbjct: 190 RALNGCRVTDTMLKLVPRQEVFRTALRAVKHWASLRGISSNVTGYLGGVNLAIMVAKICQ 249
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYP A AST++ KFF++ W WP+ + L+ P+ +LG PVWDPR D LMP+ITP
Sbjct: 250 LYPRAEASTVLLKFFILLKAWPWPRAIHLRIPEEHSLGLPVWDPRPGTRDSLALMPVITP 309
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYN---GKTM-WDKLFETPNFFTKYRHY 383
AYP NS +NV ST +M EEF + + GK + W +LF FFT++ Y
Sbjct: 310 AYPAMNSLYNVQRSTLEVMTEEFAAAADVCTSFLHCPPGKPIEWSRLFTPVPFFTQHSFY 369
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
+ L S+ S D + W G + S++R L+ NLE
Sbjct: 370 IQLEVSADSEGDLVLWDGWVSSRIRRLVRNLE 401
>gi|302665415|ref|XP_003024318.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
gi|291188368|gb|EFE43707.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
Length = 599
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 247/422 (58%), Gaps = 47/422 (11%)
Query: 36 NLSPPNQLD---LQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAK 92
N PP++ + + + L CL N S L R + L L + E+IK VS K
Sbjct: 40 NFEPPSETEKRFVWLIKMLLTCLGNTNSSG----LVFRKQTLHLLQRVTIEFIKVVSKEK 95
Query: 93 NIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEKLKTV 149
+ + GG +DID L VAP+HV R D+F+ F EK
Sbjct: 96 GLSQAAIDASGG----------------SDIDTLVVAPKHVMREDFFAHFPAILEKHAPK 139
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
D + + V +AFVP+IK+ GI ID++FARL + +P ++DL++ LL+ LD++ +R
Sbjct: 140 DAIEKMTPVPDAFVPIIKIEIFGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRC 199
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
+NG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+CQLY
Sbjct: 200 VNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 259
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV-------------- 315
P A S +V KFF + +QW WPQPVLLK ++ L VW+P+V
Sbjct: 260 PQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQLCFFFIPRALADF 319
Query: 316 ------ADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDK 369
DR+HLMPIITPAYP +T NVS+ST+ ++ E ++G + + I+ G+ W
Sbjct: 320 SFQIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSD 379
Query: 370 LFETPNFFTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE 428
LF +FF+ Y++YL + ++S S E Q W GL+ESK+RHL+G L+R I +AH P+
Sbjct: 380 LFARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSSIEIAHPFPK 439
Query: 429 CY 430
+
Sbjct: 440 GF 441
>gi|302499084|ref|XP_003011538.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
gi|291175090|gb|EFE30898.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
Length = 700
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 246/421 (58%), Gaps = 46/421 (10%)
Query: 36 NLSPPNQLDLQRT---RELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAK 92
N PP++ + + + CL N S L R + L L + E+IK VS K
Sbjct: 40 NFEPPSETEKRFVWLFKNAFACLGNTNSSG----LFFRKQTLHLLQRVTIEFIKVVSKEK 95
Query: 93 NIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEKLKTV 149
+ + GG +DID L VAP+HV R D+F+ F EK
Sbjct: 96 GLSQAAIDASGG----------------SDIDTLVVAPKHVMREDFFAHFPAVLEKHAPK 139
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
D + + V +AFVP+IK+ GI ID++FARL + +P ++DL++ LL+ LD++ +R
Sbjct: 140 DAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRC 199
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
+NG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR+CQLY
Sbjct: 200 VNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 259
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV-------------- 315
P A S +V KFF + +QW WPQPVLLK ++ L VW+P+V
Sbjct: 260 PQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQLCFFIPKALTDFS 319
Query: 316 -----ADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKL 370
DR+HLMPIITPAYP +T NVS+ST+ ++ E ++G + + I+ G+ W L
Sbjct: 320 FQIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDL 379
Query: 371 FETPNFFTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPEC 429
F +FF+ Y++YL + ++S S E Q W GL+ESK+RHL+G L+R I +AH P+
Sbjct: 380 FARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSSIEIAHPFPKG 439
Query: 430 Y 430
+
Sbjct: 440 F 440
>gi|340959697|gb|EGS20878.1| poly(A) polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 675
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/409 (42%), Positives = 255/409 (62%), Gaps = 16/409 (3%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ + P + + + L + L+ E+ E + R +VL++L + ++K
Sbjct: 7 WGVTPPISTALPTENEKRLHDALHKELRAQGTFESPAERAKREKVLAELEKITNVFVKRA 66
Query: 89 SIAKNIPPTVAEKVG-GKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
+ K ++ + G+++T+GSYRLGV+ G+DID L VAP++V YF F + L
Sbjct: 67 AQEKQPKNSILIRDAIGRVFTYGSYRLGVYGPGSDIDTLVVAPKYVTVEQYFRIFPQVLV 126
Query: 148 TV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMD--LRDDMLLKN 201
+ + DL V EAFVP+IK FDGI ID++F + L ++P D + L D+ LL+
Sbjct: 127 EMAPPGAIKDLTPVPEAFVPIIKFEFDGISIDLIFCSIQTLMQLPADPNWSLADNNLLRG 186
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
L + VRSLNG RVTDEIL LVP F+LALR IKLWA++ IY+N++G+ GGV+WAML
Sbjct: 187 LSENEVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAML 246
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP-----VWDPRVNVA 316
VAR+CQLYP A ++ +V KFF + +W WP PVLLK ++ G P VW+P++ +
Sbjct: 247 VARVCQLYPKATSAVIVNKFFHIMVKWPWPLPVLLK---DIEYGCPVTRVAVWNPKLYAS 303
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DR H MPIITPAYP +T NV ST ++Q+E ++G I+++I G+ W LF F
Sbjct: 304 DRNHKMPIITPAYPSMCATHNVGNSTMAVIQQELEKGAQITDEIMVGRRPWKDLFTKHTF 363
Query: 377 FTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
FT +++YL +I+SS + + Q W G IES+VR L+ LE +P I LA
Sbjct: 364 FTNGFKYYLTVISSSRTKQAQNAWSGFIESRVRLLVNKLEMHPDIVLAR 412
>gi|389584571|dbj|GAB67303.1| poly(A) polymerase PAP [Plasmodium cynomolgi strain B]
Length = 628
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 201/573 (35%), Positives = 301/573 (52%), Gaps = 76/573 (13%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG++ ++L+ P DL+R ++ E LK YN+ ET+ L R VL +N L E++ E+
Sbjct: 95 YGVSDPISLNYPTDEDLKRANDVVELLKSYNLYETEHALKKRERVLGMINKLFHEFVVEI 154
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
SI++ I A+ + G +YTFGSYRLGV +DID + +AP+++ R +F+ F+ KL+
Sbjct: 155 SISQGINEEDAKYIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITREIFFNEFYLKLQQ 214
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPD-DMDLRDDMLLKNLDQKCV 207
V L+A+ E + P+I+ +D ++ID+L A L + + D L +D +LKNLD+ V
Sbjct: 215 DKNVRKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEVTV 274
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNG RV D IL VP+ ++FR LR IKLWAK GIYSN+LG+LGG+SWA+L A++CQ
Sbjct: 275 RSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKVCQ 334
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN-----LGFPVWDPRVNVADRYHLM 322
LYPN S L+CKFF V+S W W PVL++ + N F VWDP N+ D+ H+M
Sbjct: 335 LYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVM 394
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGK--------------TISEDIYNG----- 363
PIITPA+P NST NV+ TR+I+ +EFK+ T + NG
Sbjct: 395 PIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGIVTPV 454
Query: 364 -----------KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIG 412
++W + + + F Y+H+L + + + W G IESK+R L
Sbjct: 455 STPSSNSSSSSSSIWTNILQPLDLFATYKHFLHIQIMATNELIYNSWKGWIESKIRLLFK 514
Query: 413 NLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIG 472
LE IN + P P+ K +NT + + F
Sbjct: 515 KLET---INELRIRP---------------YPKFYVYKK----DNTCVFLKNIYDNTF-- 550
Query: 473 LDFIAANVILNLTYDIQHFTNAV-HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLK 531
NL+Y I+ F + V +W Q + KI + + KK Q+ E+L + +
Sbjct: 551 ----------NLSYAIRDFIDIVLNW--PQKSKYPNSYKINISYQKKSQVLEFLAS--VT 596
Query: 532 KDKKTKSGDQNTSAKKRKSDQALDELGDKSRPR 564
D G + + +K + L E GD++ R
Sbjct: 597 SDVDDPQGKEPSGDEKAANGNGLPE-GDEAVQR 628
>gi|384485221|gb|EIE77401.1| hypothetical protein RO3G_02105 [Rhizopus delemar RA 99-880]
Length = 472
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/331 (51%), Positives = 233/331 (70%), Gaps = 21/331 (6%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++L+ P + +L+ T +L + L YN+ ETD+E R +VKE++ +V
Sbjct: 9 WGVTAPVSLNKPTEHELKLTNDLLKTLHEYNLFETDKEAKQR---------IVKEFVYKV 59
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S + + +VA GGKI+TFGSY+LGVH GADID LCV P+HV R +FS F L
Sbjct: 60 SKLQGLSESVARSAGGKIFTFGSYQLGVHGAGADIDTLCVFPQHVTREHFFSIMFNMLNE 119
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ EVT+L +V EA+VPVI+M+F GI ID + ARL L IP+D+DL DD LL L++KCVR
Sbjct: 120 LPEVTELTSVVEAYVPVIRMHFSGIPIDFVCARLLLPSIPEDLDLSDDSLLVGLEEKCVR 179
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
S++G RVT+EILRLVP++ FR +LRTIKLWAKK GIYSNV+G+LGGV+WAMLVAR+CQ+
Sbjct: 180 SVSGPRVTNEILRLVPSVSVFRESLRTIKLWAKKRGIYSNVMGFLGGVAWAMLVARVCQM 239
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA +++V +FF + S+W+WPQPVLLK P+ + + AD+ H MPIITP
Sbjct: 240 YPNACTASIVSRFFHIMSKWEWPQPVLLK---------PMEEGPIYPADKAHRMPIITPG 290
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISED 359
+P +T NV+ STR+IM EF + IS+D
Sbjct: 291 FPSMCATHNVTNSTRSIMMNEFLK---ISQD 318
>gi|453087599|gb|EMF15640.1| Poly(A) polymerase [Mycosphaerella populorum SO2202]
Length = 607
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 203/612 (33%), Positives = 325/612 (53%), Gaps = 67/612 (10%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
SQ G++ L+ PP D + +L LK N E+ EE + R VL KL L+
Sbjct: 3 SQTAEYLGVSPPLSTEPPKPRDNELHDQLLAELKAQNNFESPEETAKRQNVLVKLQKLLL 62
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
+ ++ V K + P + ++ GGKI+T+GS+RLGV+ G+DID L ++P+HV R D+F
Sbjct: 63 QLVQRVGKKKGLNPELLKEAGGKIFTYGSFRLGVYGPGSDIDTLMLSPKHVTREDFFEYM 122
Query: 143 FEKLKTV---DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
+ ++ +++T+L V VP+IK +GI ID+++ L +P +++L D LL
Sbjct: 123 PDMIRQAIPAEDITELVPVPGIGVPIIKTEIEGISIDLIWCTLHKDRVPPNLELNDSELL 182
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+ L + ++ +NG RVTD IL LVP FR+ALR +K+WA+K G+Y NV GY GGV++A
Sbjct: 183 RGLSETDLKCVNGTRVTDRILSLVPQTRTFRIALRAVKMWAQKRGLYGNVYGYPGGVAYA 242
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK-KPDNVNLGFPVWDPRVNVADR 318
M+VAR+CQLYP AAAST+V KFF V W+WP P+ L+ + +L WDP+ N D+
Sbjct: 243 MMVARVCQLYPRAAASTIVAKFFWVVKNWQWPSPIYLQAREKGPSLNQQEWDPQKNFRDK 302
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
HLMP+ITPAYP N+T ++ ST+ ++ E +G I DIY+GK W L FFT
Sbjct: 303 RHLMPVITPAYPVMNATHTITRSTKEVLIRELNRGHEIMADIYSGKKQWRDLLIKHEFFT 362
Query: 379 K-YRHYLVLIASSVSAEDQLEWCGLIESKVR-HLIGNLERNP-HINLAHVNP-------- 427
Y+HY+V++ +S + +DQ W GL+ S++R L+ +E + +NL V P
Sbjct: 363 SAYQHYIVIVTASKTKDDQQAWAGLVTSRLRFKLVEGIEDSADKVNL--VQPFNKGIERH 420
Query: 428 -ECYT--DTTGVIANG-------SGSPEITAEGKEE-GGENTSPPVSGVAS--------- 467
+C T + V+ G + + E TA+ K++ E + ++ +A+
Sbjct: 421 HKCKTKEEIESVLGGGLDGLVEKATTTEETADAKQQAAAEGDADVINDMAATNDDAESKD 480
Query: 468 ---------MW----FIGLDFIAANVILNLTYDIQHFTNAVH-WQATQSKMMKDGMKIEV 513
+W ++G++ + L+++Y + F V W D +++
Sbjct: 481 KKKDDSELELWTTTFYLGIELLKGEKNLDISYSVNDFKGNVQLWPGYNP----DVHSVQI 536
Query: 514 RHVKKKQL-------SEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRLD 566
++ + QL E P +KK KK +N K+ S+ LDE + ++ R
Sbjct: 537 KYYRDYQLPPDLFSEGEKRPVRKIKKSKK-----ENLEKKRSVSNAGLDENQNPAKRRQS 591
Query: 567 SDSNSLSDKVNN 578
N + N
Sbjct: 592 GPVNGTGTPITN 603
>gi|403220429|dbj|BAM38562.1| polyadenylate polymerase [Theileria orientalis strain Shintoku]
Length = 511
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 190/518 (36%), Positives = 288/518 (55%), Gaps = 37/518 (7%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIK- 86
+YG+T + P++ DL+ ++EL LK YN+ ETDE R EVL LN L++++++
Sbjct: 12 SYGITAPVTTEGPSKEDLKASQELIVLLKSYNLYETDEGKKRREEVLESLNRLLQQFVRR 71
Query: 87 EVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
+V I + A V K+ TFGSYRLG+ +DID C+ PR + R +FS F+ L
Sbjct: 72 QVKINMGLTDQEANSVTAKLLTFGSYRLGIVAPDSDIDVACLCPRGITREAFFSDFYNTL 131
Query: 147 KTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKC 206
V+ +T L++V +A+ PVIK+ + I ID+LF+ L + +++L D+ +L+N+
Sbjct: 132 TKVEGITKLQSVPDAYTPVIKLYYHDISIDILFSNLDEPTVDPNINLLDNKILRNMSDSN 191
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARIC 266
VRS+NGCRV IL VP NFR LR IKLWA + IYS V+GYLGGV+WA+L AR+C
Sbjct: 192 VRSINGCRVASFILDSVPKKGNFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVC 251
Query: 267 QLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN-----LGFPVWDPRVNVADRYHL 321
Q+YPN A + L+ KFF VFS W W PV L K + + F VWDP ++ DR HL
Sbjct: 252 QMYPNFAPNRLIEKFFKVFSMWNWIYPVTLCKIKRESGVPGLMSFKVWDPTNSLQDRQHL 311
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTI--SEDIYNGKTMWDKLFETPNFFTK 379
MPIITPA+P NST NV+ +T+ ++ EE + + + ++ N + +W+ + E + F+K
Sbjct: 312 MPIITPAFPSMNSTHNVTATTKRVVTEELSRAAQLLKTPNLTNTQ-LWEMVLEEEDVFSK 370
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIAN 439
Y+H+LV+ S +W G I S++R LI LE + + P G
Sbjct: 371 YKHFLVIEVYGSSEHAHNKWEGWIGSRMRFLIKKLE---TLEYTQIRP-----LPGFFKF 422
Query: 440 GSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVH-WQ 498
E A ++T+P V G S ++ IQ F ++ W
Sbjct: 423 EDRDWEY-ASSAFFAFKHTAPVVEGYQS--------------FDIRMPIQSFKEIINTWC 467
Query: 499 ATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKT 536
++ KD + + +R++K KQL +Y+ + K K+T
Sbjct: 468 DMET--FKDQIDVNIRYLKSKQLPDYIQTN--KSQKRT 501
>gi|255085208|ref|XP_002505035.1| predicted protein [Micromonas sp. RCC299]
gi|226520304|gb|ACO66293.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/391 (43%), Positives = 249/391 (63%), Gaps = 12/391 (3%)
Query: 43 LDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKV 102
+DL+ + +L L NV E EE + R EVL ++N +++W + S +K I + +
Sbjct: 1 MDLKLSADLEARLHLENVFEAPEECTRREEVLGEINEALQQWCRARSASKGIEEDLDPRC 60
Query: 103 GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD---------YFSSFFEKLKTVDEVT 153
+YTFGSYRLGVH ADID LC+ PRH+ RA+ Y SF+ ++K
Sbjct: 61 --NLYTFGSYRLGVHGPAADIDTLCIGPRHLTRAEDFFGSEWTGYEGSFYLEMKNHPGTD 118
Query: 154 DLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMDLRDDMLLKNLDQKCVRSLNG 212
+ AV +A VP +K+ F G EID+ + + + +P+D+D+ +L+NLD V+SLNG
Sbjct: 119 QVVAVPDAVVPELKLVFRGFEIDIAYVCMGSYVSVPEDLDVCQTTILQNLDDASVKSLNG 178
Query: 213 CRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNA 272
CRV D++LRLVPN + FR+ALR +++WAK+ G+YSNVLGY GGV+ A+LVAR+CQLYPNA
Sbjct: 179 CRVADQLLRLVPNHDAFRIALRALRVWAKERGVYSNVLGYFGGVNLALLVARVCQLYPNA 238
Query: 273 AASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQ 332
A S LV FF ++ W+W PV+L + G VWD RVN A+R+ LM IITPAYP Q
Sbjct: 239 APSMLVYSFFQLWDAWQWSTPVMLTPIVDEGHGLRVWDERVNKAERFQLMKIITPAYPAQ 298
Query: 333 NSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVS 392
NSTFNV+ ST +++ EFK+G+ + ++ K W+ L+E FFT ++HYL + ++VS
Sbjct: 299 NSTFNVTHSTLHVLKNEFKRGREVCAEVLMSKKRWESLWEPLPFFTMHKHYLQVTIAAVS 358
Query: 393 AEDQLEWCGLIESKVRHLIGNLERNPHINLA 423
+D +W G + S++R L+ +E LA
Sbjct: 359 EDDFKKWEGWVHSRLRMLVQGVETPARPRLA 389
>gi|325190732|emb|CCA25225.1| predicted protein putative [Albugo laibachii Nc14]
Length = 539
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/378 (43%), Positives = 230/378 (60%), Gaps = 1/378 (0%)
Query: 46 QRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGK 105
++ + L + LK + E L SR VL K++ ++KE+ +I + I A+K+ +
Sbjct: 22 KQLQSLIDTLKDLQLFEDGNRLMSRELVLKKVDKILKEFALHEAINEGIEEMQAKKLRIQ 81
Query: 106 IYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPV 165
+ TFGSYRLG HH ADID LC+APRH R +F L+ V+DL + AFVPV
Sbjct: 82 LKTFGSYRLGCHHPDADIDVLCLAPRHCTRVKFFQKLPILLEVSSFVSDLHVIPNAFVPV 141
Query: 166 IKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPN 225
IK DGI +DMLF+ L L+ IP+ +++ DD L LD VRSLNGCRVT++IL+L+ +
Sbjct: 142 IKFKVDGIAVDMLFSCLYLESIPEHINILDDQFLNGLDDVSVRSLNGCRVTEKILQLISH 201
Query: 226 IENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVF 285
E FR+ L IK WA+ GIYSNVLG+LGGV+ A++ A++CQLYP+A TL+ KFF ++
Sbjct: 202 QEYFRITLTAIKYWARNRGIYSNVLGFLGGVNLAIMAAKVCQLYPDALPPTLLIKFFHLY 261
Query: 286 SQWKWPQPVLLKKPDN-VNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRT 344
W WP P+ + N + LGFP W+P+V DR HLMPIITP YP NS++NV ST
Sbjct: 262 HLWNWPNPLSITPCINPLQLGFPSWNPKVYPKDRLHLMPIITPCYPSINSSYNVMSSTLD 321
Query: 345 IMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIE 404
+M+ EFK ++ W +L +FF KYRH+L + SS ED W +E
Sbjct: 322 VMKTEFKNASLQVSNVRAKVLSWSELLTEASFFDKYRHFLQVQISSEDEEDFGRWVTWVE 381
Query: 405 SKVRHLIGNLERNPHINL 422
S++R LE P + +
Sbjct: 382 SRLRTFFIRLEAIPFVRI 399
>gi|294460282|gb|ADE75723.1| unknown [Picea sitchensis]
Length = 554
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/437 (38%), Positives = 258/437 (59%), Gaps = 30/437 (6%)
Query: 9 SMQTSKPHQDGKPQSQAPVTYGMTTA------LNLSPPNQLDLQRTRELAECLKPYNVSE 62
S+ ++PH + PV+ + T + L P +D+ RT L + +
Sbjct: 15 SVPNARPHIGISGSTAPPVSGPLMTVPPIPGHVFLDSPTDIDIARTHALEKFQIDAELIL 74
Query: 63 TDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGAD 122
T++E + R VL++L +VK W + V+ + +P + E KI+TFGSY+LGVH AD
Sbjct: 75 TEKEEAKRRSVLAQLEQIVKRWARRVTWQRGLPKDLKESSNAKIFTFGSYQLGVHGPEAD 134
Query: 123 IDALCVAPRHVD-RADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAR 181
IDALCV P + D+F + LK EV++++ V+ A VP+++ F GI ID+L+AR
Sbjct: 135 IDALCVGPCYATLEDDFFIVLYNMLKKTAEVSEVQCVKSANVPLMRFKFSGISIDLLYAR 194
Query: 182 LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAK 241
L+L+ IP+DMD+ D+ LL+NLD V+SLNGCRVT IL+LVP IENFR LR IK WAK
Sbjct: 195 LSLRTIPEDMDILDEKLLENLDDTTVKSLNGCRVTARILQLVPKIENFRSTLRCIKFWAK 254
Query: 242 KHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLL--KKP 299
+ GIYS++ G+LGG+ WA+LVAR+CQ++PNA S LV +FF +++ W+WP PV L +P
Sbjct: 255 RRGIYSHIFGFLGGIHWAVLVARVCQMFPNATVSMLVSRFFWIYAHWQWPTPVTLVETQP 314
Query: 300 DNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQG-KTISE 358
D+ + +DR+H MPII P +P ++NV+ ST ++ EF +G I +
Sbjct: 315 DH-----------ADGSDRHHHMPIIIPVHPYSCCSYNVTRSTLQKLKSEFSRGWDAIMK 363
Query: 359 DIYNGKTM-----WDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGN 413
T+ W+ LFE F + Y +++ + ++ +D W G +ES+ RHL+
Sbjct: 364 METKWGTLPNSGDWNILFERFPFCSSYEYFIQIYVTASDEDDFRSWRGWVESRFRHLLLK 423
Query: 414 LERNPHINLAHVNPECY 430
E+ P A+ +P Y
Sbjct: 424 FEKLP----AYCDPNPY 436
>gi|336268304|ref|XP_003348917.1| hypothetical protein SMAC_01938 [Sordaria macrospora k-hell]
gi|380094176|emb|CCC08393.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 632
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 173/409 (42%), Positives = 254/409 (62%), Gaps = 14/409 (3%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
+ G+T ++ + P + ++T L + L+ E+ E R VL+ L + E++K
Sbjct: 7 SLGVTPPISTALPTDAEKRQTDALFKELRAQGTFESQAETEKRWAVLADLQRITDEFVKR 66
Query: 88 VSIAKNIPP---TVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF-- 142
A+ P + G+I+T+GS+RLGV+ G+DID L V P++V YF F
Sbjct: 67 A--AQESEPHNSILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQYFDIFPK 124
Query: 143 -FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMD--LRDDML 198
E++ +TDL V EAFVP+IK + GI ID++F + +L+++PDD + L ++ L
Sbjct: 125 LLEEMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKEWNLNNNNL 184
Query: 199 LKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
L+ L + VRSLNG RVTDEIL LVP + F+LALR IKLWA++ IY+N++GY GGV+W
Sbjct: 185 LRGLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAW 244
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPD-NVNLG-FPVWDPRVNVA 316
AMLVAR+CQLYP A ++ +V KFF + W WP PVLLK + N ++ VW+P++ +
Sbjct: 245 AMLVARVCQLYPKATSAVVVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPS 304
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DR H MPIITP+YP +T NV S+ ++Q+E ++G I+E+I GK W LFE F
Sbjct: 305 DRNHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQIAEEIMLGKRPWKDLFEKHTF 364
Query: 377 FTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
FT ++ YL +I+S + E Q W G +ES+VR L+ LE +P I LA
Sbjct: 365 FTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLELHPSIALAR 413
>gi|269859597|ref|XP_002649523.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
gi|220067074|gb|EED44542.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
Length = 473
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 180/438 (41%), Positives = 264/438 (60%), Gaps = 14/438 (3%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
Q + + +G+T L + L++++ L LK + E++E+ +R L +L+ L+
Sbjct: 3 QKELNMKHGVTGPATLDSSTKDSLEKSKILINFLKENDFFESEEDAKTRERALGRLSFLL 62
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
K+++++ S++K + GG I TFGSYRLGVH KGADIDALCV PRH+ R D+F+
Sbjct: 63 KKFVRQQSLSKG----ETKDCGGIICTFGSYRLGVHDKGADIDALCVVPRHISRKDFFNI 118
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F+ +L VT+L VE+A+VPVIKM++ I ID+ AR+ L + ++DL +D LLK
Sbjct: 119 FYNQLLEDSNVTELSKVEDAYVPVIKMHYMDIPIDLTMARVNLPVVDSNLDLLNDTLLKT 178
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D+KC+ S+NG RVTD +L L+PN E F +ALR IK WAK+ IY N GY GGV++++
Sbjct: 179 MDEKCILSINGSRVTDSMLNLIPNKETFHMALRAIKFWAKRRYIYGNAYGYFGGVAFSIS 238
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VARICQLYPN ++ +VCK+F +S W WP+P+LLK + + VWD + ADRYH
Sbjct: 239 VARICQLYPNKSSYDIVCKYFEYYSNWTWPEPILLKPIVDHHYNLKVWDNQKYPADRYHK 298
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYP ST NV ST ++ EF++ I + N T + ++F+ +FF KY+
Sbjct: 299 MPIITPAYPSMCSTHNVFQSTFDLICREFRRSTEIINNSINS-TDFLQIFDNTDFFRKYK 357
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYT-DTTG----- 435
Y + I E W G +ESKVR L E I A P+ + D T
Sbjct: 358 LY-INIKVKADKESIKSWSGFVESKVRILCSKFEAVESIVAAIPFPKPFIKDETCNFFIG 416
Query: 436 --VIANGSGSPEITAEGK 451
++ GS + +I +G+
Sbjct: 417 IEILKTGSQNKKIYVDGQ 434
>gi|403274237|ref|XP_003928889.1| PREDICTED: poly(A) polymerase alpha [Saimiri boliviensis
boliviensis]
Length = 495
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/280 (55%), Positives = 196/280 (70%), Gaps = 27/280 (9%)
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
MLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRY
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF K
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIAN 439
Y+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF--------- 171
Query: 440 GSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAV 495
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+ V
Sbjct: 172 --PAPKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTV 217
Query: 496 HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+ QA SKM + MKI HVK+KQL + LP H+L+K KK
Sbjct: 218 YRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKK 257
>gi|402877145|ref|XP_003902301.1| PREDICTED: poly(A) polymerase alpha [Papio anubis]
gi|119602049|gb|EAW81643.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
gi|119602053|gb|EAW81647.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
Length = 495
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/280 (55%), Positives = 196/280 (70%), Gaps = 27/280 (9%)
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
MLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRY
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF K
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIAN 439
Y+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF--------- 171
Query: 440 GSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAV 495
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+ V
Sbjct: 172 --PAPKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTV 217
Query: 496 HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+ QA SKM + MKI HVK+KQL + LP H+L+K KK
Sbjct: 218 YRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKK 257
>gi|295664146|ref|XP_002792625.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278739|gb|EEH34305.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 297/575 (51%), Gaps = 83/575 (14%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ + P ++ +L LK N E+ E R + L + + E++K V
Sbjct: 9 WGVTPPISTALPTTSEIAANDDLTTELKQQNNFESPSETERRKQTLHLIQRVTVEFVKVV 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF---FEK 145
S K + + GGKI+T+GSYRLGV+ G+DID L V P+HV D+FS F E+
Sbjct: 69 SRRKGLSQAAIDIAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPPLLEQ 128
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
+ + L V +AFVP+IK+ GI ID+++ARL + +P ++DL++ LL+ LD+K
Sbjct: 129 MAPKGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEK 188
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
+R +NG RVTDEIL LVP + FRLALR IKLWA++ IYSN++G+ GGV+WAMLVAR
Sbjct: 189 EIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARP 248
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
+ P L VW+P++ DRYHLMPII
Sbjct: 249 IEEGP---------------------------------LQMKVWNPKIYHGDRYHLMPII 275
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYL 384
TPAYP +T NVS+ST+ ++ E K+G I + I+ G+ W+ LF FF++ Y++YL
Sbjct: 276 TPAYPSMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQLTWNDLFTRHTFFSQDYKYYL 335
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE-------CYTDTTGVI 437
+ +SS E Q W GL+ESK+RHL+G L+R I +AH P+ C T+ +
Sbjct: 336 SITSSSRGKEAQSVWSGLVESKLRHLVGALDRKSSIEVAHPFPKGFERVHVCKTEKE-IA 394
Query: 438 ANGSGSPEITAEGK-----------------EEGGENTSPPV-------SGV---ASMWF 470
SGS + A+G + GGE P SG ++ ++
Sbjct: 395 EVMSGSTQYQAKGTKTKTTDQTNDPQHAAAVQNGGETVQMPQADEPNGESGCTLYSTTYY 454
Query: 471 IGLDFI----AANVILNLTYDIQHF-TNAVHWQATQSKMMKDGMKIEVRHVKKKQLSE-- 523
IGL+ A L+++ D Q F + W Q + + + HV+ L E
Sbjct: 455 IGLELKPLAPGAARSLDISTDTQIFKSTCTSWPQYQPGI----NDLHITHVRNYDLPEDV 510
Query: 524 YLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELG 558
+ + K K+ + +++S +LD+ G
Sbjct: 511 FQSGEVRPSRPKKKTLKKTEPTAQKRSIHSLDQQG 545
>gi|378756776|gb|EHY66800.1| poly(A) polymerase [Nematocida sp. 1 ERTm2]
Length = 507
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 289/510 (56%), Gaps = 26/510 (5%)
Query: 49 RELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYT 108
+++ E L+ E + E R VL L+NLV ++I +++ IP + K KI+T
Sbjct: 14 KKVVEYLQTKGFFEDENESIQRERVLGMLSNLVNKFIMDIAKRNEIP--IDSKSLSKIFT 71
Query: 109 FGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKM 168
FGSYRLGVH GADID LCV P V R ++F+ F+++L + +T++ V FVP+IK
Sbjct: 72 FGSYRLGVHSSGADIDTLCVVPNFVSRNEFFTVFYDELCSKSYITEISKVTNTFVPLIKF 131
Query: 169 NFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIEN 228
I ID++FAR+ L IP ++DL ++ LLK++ +KC+ SLNG RVTDEIL VPNIE
Sbjct: 132 KIKSIPIDLVFARMDLPSIPPNIDLLNNKLLKHMSEKCILSLNGNRVTDEILAQVPNIET 191
Query: 229 FRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQW 288
F LR +K WA+K +Y + GY+GGV++A+ VA++CQ+YP+A A + KFF VFS+W
Sbjct: 192 FHKTLRFMKYWAQKRQVYGHAYGYMGGVAYALCVAKVCQMYPSADAFKTIEKFFEVFSKW 251
Query: 289 KWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQE 348
WPQPV++K+ + N VW+P+VNV + MP+ITP YP ST N++ ST +M+
Sbjct: 252 AWPQPVIIKEVPDCNYNLKVWNPKVNVHHKNDKMPVITPVYPPLCSTHNITTSTLFVMKR 311
Query: 349 EFKQGKTISEDIYNGKT----MWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIE 404
EF++G I + KT + D+L E +FFT+++ Y ++ + ++++ + G E
Sbjct: 312 EFQRGTAIFAESLQNKTEPFKVLDELCEDTDFFTRHKTYFMIAMACDNSKEFGRFMGFAE 371
Query: 405 SKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSG 464
++VR LE +I A+ P+ Y GV + G EE
Sbjct: 372 TRVRMFAQKLESIENIEYAYTLPKNY-HLEGVTQKEVPLLKDLQCGDEEYS--------- 421
Query: 465 VASMWFIGLDF------IAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKK 518
S+ FIG++F + A+ +NL +Q +++ + + ++ E +K+
Sbjct: 422 -FSVLFIGINFSSVKLPLNASKKMNLKKPVQELKSSL---EGYEQEEECELRYEAIPLKQ 477
Query: 519 KQLSEYLPAHMLKKDKKTKSGDQNTSAKKR 548
K L+ L + K+ +K K ++ +K+
Sbjct: 478 KALAPILNLFIEKESRKRKFDEEAAENRKK 507
>gi|1709573|sp|P51005.1|PAPO2_XENLA RecName: Full=Poly(A) polymerase alpha-B; Short=PAP-alpha-B;
AltName: Full=Polynucleotide adenylyltransferase alpha-B
gi|643646|gb|AAC59746.1| poly(A) polymerase type 2 [Xenopus laevis]
Length = 484
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/280 (55%), Positives = 196/280 (70%), Gaps = 27/280 (9%)
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
MLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRY
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLF+ PNFF K
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLVKAEWSKLFDAPNFFQK 120
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIAN 439
Y+HY++L+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 121 YKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF--------- 171
Query: 440 GSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAV 495
SP +E +E +MW IGL F + N+ ++LTYDIQ FT+ V
Sbjct: 172 --PSPSENSEKEE------------FRTMWVIGLVFKKMENSENLSVDLTYDIQSFTDTV 217
Query: 496 HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+ QA SKM + +KI HVK+KQL + LP+H+L K KK
Sbjct: 218 YRQAINSKMFETEIKIAAMHVKRKQLHQLLPSHVLPKKKK 257
>gi|42571529|ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|332191537|gb|AEE29658.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 586
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/405 (40%), Positives = 236/405 (58%), Gaps = 30/405 (7%)
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
L + EVT+L V +A VP++ +G+ ID+L+A+L L IP+D+DL D +L+N D++
Sbjct: 2 LSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADEQ 61
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
VRSLNGCRVTD+ILRLVPNI+NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVARI
Sbjct: 62 TVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARI 121
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYPNA + LV +FF VF QW WP + L PD +LG VWDPR+N DR H+MPII
Sbjct: 122 CQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPII 181
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYP NS++NVS ST IM+ EF++G I E + + K WD LFE FF Y++YL
Sbjct: 182 TPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQ 241
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPE 445
+ S+ + +D +W G +ES++R L +ER H + H +P +
Sbjct: 242 IDISAANVDDLRKWKGWVESRLRQLTLKIER--HFKMLHCHPHPHD-------------- 285
Query: 446 ITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQATQSKM 504
++TS P+ +F+GL +DI+ +
Sbjct: 286 ---------FQDTSRPLH---CSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTL 333
Query: 505 MKDGMKIEVRHVKKKQLSEYL-PAHMLKKDKKTKSGDQNTSAKKR 548
GM+I V H+K++ L ++ P + + D N ++ R
Sbjct: 334 WIPGMEISVGHIKRRSLPNFVFPGGVRPSHTSKGTWDSNRRSEHR 378
>gi|384080895|dbj|BAM11110.1| poly(A) polymerase alpha, partial [Siebenrockiella crassicollis]
Length = 352
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 207/310 (66%), Gaps = 28/310 (9%)
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DR
Sbjct: 1 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 60
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 61 YHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQ 120
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIA 438
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 121 KYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF-------- 172
Query: 439 NGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNA 494
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 173 ---PAPKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDT 217
Query: 495 VHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQA 553
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK + G + T D +
Sbjct: 218 VYRQAINSKMFEMDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVRLTVLNDSSLDLS 277
Query: 554 LDELGDKSRP 563
+D S P
Sbjct: 278 MDSDNSTSVP 287
>gi|222629442|gb|EEE61574.1| hypothetical protein OsJ_15948 [Oryza sativa Japonica Group]
Length = 556
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 195/543 (35%), Positives = 283/543 (52%), Gaps = 42/543 (7%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
SQ+P + G+ ++L P DL+ T L L+ + E+ + +
Sbjct: 3 SQSPQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESARGDGGPGGGAPRPPRRRR 62
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYT-FGSYRLGVHHKGADIDALCVAPRHVDR-ADYFS 140
+ A PT G + FGS LGVH +G+DIDAL V P +VDR D+F
Sbjct: 63 PLGEAPHAAAPGTPTAWPDRGHRPGAPFGST-LGVHGRGSDIDALVVGPSYVDRDRDFFG 121
Query: 141 SFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLK 200
+ L V +L+ V A VPVIKM F G+++D+++A + L +P D+DL +L+
Sbjct: 122 ALAAALAETAAVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLR 181
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
LD RSLNG RV DEILRLVP+ FR LR +K WAK G+YSNV G+LGGV WA+
Sbjct: 182 GLDLATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAI 241
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN----VNLGFPVWDPRVNVA 316
LVA +C LYPNA+ S L+ +FF VF++WKWP PV+L+ ++ + L PVWDPR N
Sbjct: 242 LVACVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHNDGELGLSLPVWDPRRNPR 301
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIY---NGKTMWDKLFET 373
D+ HLMPI+TPAYP NS +NVS +T ++ E+ G + ++I +G WDKLF+
Sbjct: 302 DKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQP 361
Query: 374 PNFFTKYRHYL-VLIASSVSAEDQL-EWCGLIESKVRHLIGNLERNPH-INLAHVNPECY 430
NFF Y+ YL V + + ED L EW G +ES++R L +E + + L H++P+ Y
Sbjct: 362 FNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPY 421
Query: 431 TDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLD--FIAANVILNLTYDI 488
AE E P S +F+GL + +D+
Sbjct: 422 A----------------AEPHNE------PRRRRRTSSFFVGLSKPPAQPQQQQHQLFDL 459
Query: 489 QHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKR 548
+ T + + GM++ V HV++K L Y+ +L+ G + +KR
Sbjct: 460 RATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSYVLRQLLR-----SPGRHDQLKRKR 514
Query: 549 KSD 551
D
Sbjct: 515 ADD 517
>gi|297695842|ref|XP_002825134.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Pongo abelii]
Length = 497
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/282 (54%), Positives = 197/282 (69%), Gaps = 29/282 (10%)
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV--AD 317
MLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRV+V +D
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVNPSD 60
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 61 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 120
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVI 437
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 121 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF------- 173
Query: 438 ANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTN 493
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+
Sbjct: 174 ----PAPKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTD 217
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
V+ QA SKM + MKI HVK+KQL + LP H+L+K KK
Sbjct: 218 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKK 259
>gi|224141615|ref|XP_002324162.1| predicted protein [Populus trichocarpa]
gi|222865596|gb|EEF02727.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 140/285 (49%), Positives = 205/285 (71%), Gaps = 1/285 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++++ P + DL R EL + L ++E+ +E R EVL +++ +VK+W+K++
Sbjct: 3 YGITKPISVAGPTEPDLHRNAELEKFLVDSGLNESKDETIKREEVLGRIDQIVKDWVKQL 62
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLK 147
+ + + E+ I+TFGSYRLGVH GADID LCV P +V+R D+F + +KL
Sbjct: 63 TRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFITLHDKLA 122
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+EVT+L+ V +A VPV+K F GI ID+L+A ++L +P+D+D+ + +L +D++ V
Sbjct: 123 ETEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISNGSVLYEVDEQTV 182
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRV D+IL+LVPN+E+FR LR +K WAK+ G+YSNV G+LGGV+WA+LVAR+CQ
Sbjct: 183 RSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 242
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPR 312
LYPNA S LV +FF V++QW+WP PV+L + +LGFPVWDPR
Sbjct: 243 LYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEEDDLGFPVWDPR 287
>gi|387594343|gb|EIJ89367.1| poly(A) polymerase [Nematocida parisii ERTm3]
gi|387596813|gb|EIJ94434.1| poly(A) polymerase [Nematocida parisii ERTm1]
Length = 506
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/505 (35%), Positives = 283/505 (56%), Gaps = 19/505 (3%)
Query: 50 ELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTF 109
++ E L E + E R VL KL+NLV ++I +++ IP + +K KI+TF
Sbjct: 15 KVVEYLHSKGFFEDESESIQRERVLGKLSNLVNKFIMDIAKRNQIP--IDKKSLSKIFTF 72
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMN 169
GSYRLGVH GADID LCV P V R ++F++F+++L + D +T++ V FVP+IK
Sbjct: 73 GSYRLGVHSSGADIDTLCVVPNFVSRNEFFTTFYDELCSKDYITEISKVTNTFVPLIKFK 132
Query: 170 FDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENF 229
I ID++FAR+ L I ++DL ++ LLK++ +KC+ SLNG RVTDEIL VPNI F
Sbjct: 133 IKTIPIDLVFARVDLPSISPNIDLLNNKLLKHMSEKCILSLNGNRVTDEILAQVPNISTF 192
Query: 230 RLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWK 289
LR IK WA+K +Y + GY+GGV++A+ VA++CQLYP A A + KFF VFS+W
Sbjct: 193 HKTLRFIKYWAQKRQVYGHSYGYMGGVAYALCVAKVCQLYPGADAFETIEKFFDVFSKWP 252
Query: 290 WPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEE 349
WPQPV++K+ + N VW+P++N + MP+ITP YP ST N++ ST + ++E
Sbjct: 253 WPQPVIIKEVPDCNYNLKVWNPKINPQHKNDKMPVITPVYPPLCSTHNITNSTLFVAKKE 312
Query: 350 FKQGKTISEDIYNGK---TMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESK 406
F +G I + + K + D+L E +FFT+++ Y ++ + + ++ + G E++
Sbjct: 313 FLRGVAIFSENADKKDPMKILDQLCEDADFFTRHKTYFMIALACDNPKEFSRFMGFAETR 372
Query: 407 VRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVA 466
VR LE +I A+ P+ Y I S + + + G++ S
Sbjct: 373 VRMFAQKLENIENIEYAYTFPKKY------ILEDVTSKNVPLLKELKCGDD-----SYAF 421
Query: 467 SMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKD---GMKIEVRHVKKKQLSE 523
+FIG+DF + LN + + + ++++ ++ M+ E +K+K L+
Sbjct: 422 GAFFIGIDFSTVKLPLNASKKMNLKKPVLEFKSSLETYEQEEDCEMRYEAIPMKQKALAP 481
Query: 524 YLPAHMLKKDKKTKSGDQNTSAKKR 548
L K K K ++ +K+
Sbjct: 482 ILSLFAPKDSLKRKFTEETEENRKK 506
>gi|238583172|ref|XP_002390161.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
gi|215453244|gb|EEB91091.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
Length = 309
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/287 (49%), Positives = 199/287 (69%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ + + + + T L E L+ E++EE +R VL +++ LVK+++K+V
Sbjct: 2 WGVTPPISTAESTEREKEVTESLMEELRQQGTFESEEEAQTRELVLGRVSALVKKFVKKV 61
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
+A+ + A GGKI+TFGSYRLGVH +DID LCV P+HV R D+F F L+
Sbjct: 62 GMARGLSEAAATAAGGKIFTFGSYRLGVHGPSSDIDTLCVVPKHVQREDFFEVFEPMLRE 121
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
+ T++ V EA+VP+I N GI +D L ARLAL IP+D+ L+DD LL+N+D++CVR
Sbjct: 122 FEGATEVAGVPEAYVPIITANISGIPLDFLMARLALSSIPEDLSLQDDNLLRNIDERCVR 181
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SL G RV +EILRLVPN++ FR +LR IKLWA++ IYSNV G+ GGV+WAM+VARICQL
Sbjct: 182 SLGGSRVANEILRLVPNVQVFRDSLRCIKLWAQRRAIYSNVNGFFGGVAWAMVVARICQL 241
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
YPNA A +V +FF++ QW WPQPVLLK+ + L VW+P+V V
Sbjct: 242 YPNAIAGAIVSRFFIIMYQWTWPQPVLLKQIEEGPLQVRVWNPKVRV 288
>gi|294939386|ref|XP_002782444.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239894050|gb|EER14239.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 283/539 (52%), Gaps = 41/539 (7%)
Query: 40 PNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVA 99
P DL++ + E L + E+ R + L L ++ +W+ EV + + + A
Sbjct: 27 PTVADLKQNEGMLEFLTTAAPEASKEDREKREKALRVLEGVIGDWLTEVGVQQGMTAENA 86
Query: 100 EKVG--GKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRA 157
K GK++TFGS+RLG+ +DID LCVAPRHV R +F S KL+ +DEV +
Sbjct: 87 RKQSNNGKLFTFGSHRLGLISPSSDIDCLCVAPRHVTREAFFGSLVGKLQQMDEVETVTP 146
Query: 158 VEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTD 217
V +A+ P+IK+ ++ID+LFARL L DL+ D LLKNLD + VR +NG RV D
Sbjct: 147 VPDAYAPIIKLICCEVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSVRCVNGTRVAD 206
Query: 218 EILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTL 277
IL+LVP FR LR IKLWAK+ G+Y+N++G+ GG++WA+LVAR+CQ++PN + L
Sbjct: 207 LILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQMFPNMQSVQL 266
Query: 278 VCKFFLVFSQWKWPQPVLL---KKPDNVNL-GFPVWDPRVNVADRYHLMPIITPAYPQQN 333
V +FFL+ S+W W PV L ++ + L F VW+P+ +DR HLMP+ITPA+P N
Sbjct: 267 VRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQYASDRSHLMPVITPAFPSMN 326
Query: 334 STFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSA 393
ST+NV+ +T+ I+ E ++ ++ + W+ L FF Y +Y+ + S++S+
Sbjct: 327 STYNVTETTKRIIMGEIERAHKLTLP-KKEQVDWELLCHKFPFFCNYLYYVQIRVSALSS 385
Query: 394 EDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEE 453
++ G +ES++R L+ LE P I PE E+ E
Sbjct: 386 TAYRKYKGFVESRLRLLVRMLENTPGIKSVRPWPE----------------EMPYVVDGE 429
Query: 454 GGENTSPPVSGVASMWFIGLDFIAANVIL---NLTYDIQHFTNAV-----HWQATQSKMM 505
EN+ W+IGLDF + + +T D+++ T+ W ++
Sbjct: 430 VRENS--------CCWYIGLDFPKLSSMAAGQTVTCDLRNCTSGFFDRINEW--SEKDTY 479
Query: 506 KDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPR 564
++++ ++ + +L E+L + KR+ ++ G + R
Sbjct: 480 HGQFEMDIAYISRPKLPEHLVKDQSPSTDTAPVPEMAVQGTKRRVQSGMNLAGRPKKGR 538
>gi|298708409|emb|CBJ48472.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 496
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/451 (40%), Positives = 248/451 (54%), Gaps = 24/451 (5%)
Query: 25 APVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEW 84
AP+ ++ P DL ++EL + LK + E E R VL L LVKEW
Sbjct: 5 APMQQHFGAVISDREPESKDLAASQELEKFLKAMGLYENAEGSKRRKAVLLMLLKLVKEW 64
Query: 85 IKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFE 144
+++ + + E + TFGSY LGVH ADID LC+APRH R +F+SF +
Sbjct: 65 SGKIAAEEGL--DKEEVSPATLKTFGSYHLGVHTPDADIDVLCLAPRHCSRESFFTSFCQ 122
Query: 145 KLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQ 204
L+ E+ +L V EA+ PVIK G+ IDMLF L ++P ++ L++LD
Sbjct: 123 ILRNHTEIDELFPVPEAYTPVIKFKAQGVSIDMLFCSLHYPKLPRLCNVHVQEHLRHLDD 182
Query: 205 KCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVAR 264
VRSLNG RV + IL LVPN + FR LR +K WA++ GIYSNVLG LGGV+WA+LVA
Sbjct: 183 AGVRSLNGVRVAELILSLVPNHQAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAF 242
Query: 265 ICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK-----KPDNVNLGFP-----VWDPRVN 314
+ Q YPNA+ S L+ KFFL++ +WKWP V L + NV G P VW+P N
Sbjct: 243 VVQRYPNASPSVLLTKFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAVWNPVAN 302
Query: 315 VADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETP 374
D+ HLMPIITPAYP NS++NV +++EE +G I++ I G W LFE
Sbjct: 303 PRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIREEIARGWRITKGISLGIANWANLFERS 362
Query: 375 NFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHL------IGNLERNPHINLAHVNPE 428
+FF ++ Y+ + S+ SA D W G IES++R I +E P +N NP
Sbjct: 363 DFFWRFELYVQVDISARSAADHRLWFGWIESRMRSFLVCLDQIDMVEAYPFVN-PLPNPY 421
Query: 429 CYTDTTGVIAN----GSGSPEITAEGKEEGG 455
TG + N G G PE+ A G+ G
Sbjct: 422 LTNAETGAVGNSFFIGLGFPEV-ANGRSPSG 451
>gi|224001714|ref|XP_002290529.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973951|gb|EED92281.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 367
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 149/367 (40%), Positives = 216/367 (58%), Gaps = 18/367 (4%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGA 121
E+ E + R VL K+ NL++EW+K V++ K + E GG+++T GSYRLGVH GA
Sbjct: 2 ESTEGIQRRERVLVKMGNLMREWVKGVAVKKGLNRDAVEGAGGELFTSGSYRLGVHEPGA 61
Query: 122 DIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAR 181
DID + VAP R D+F S E+++ +VT+ VE A VP++ +++GI ID+LFAR
Sbjct: 62 DIDTIAVAPNICTREDFFDSLAERIRRHPDVTNFVPVENAAVPILTFDWEGINIDLLFAR 121
Query: 182 LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNI----ENFRLALRTIK 237
L +P D D+ +D++L +D +SLNG RVT+ I LV + F +R ++
Sbjct: 122 LNASSVPRDFDIDNDLVLSGVDSATEKSLNGPRVTNLIAALVSGTDERYQTFLTVVRLVR 181
Query: 238 LWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK 297
WAK G+YSN +GY GGV+ + VA + QLYPNA ++L+ KFFLVF W+WP PV+L
Sbjct: 182 KWAKARGLYSNKMGYWGGVNINIAVALVLQLYPNACPASLLRKFFLVFKSWRWPNPVMLT 241
Query: 298 KPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTIS 357
KP + LG PVW+ A+ + P++TPAYP NST +VS T I+ EEF +G +
Sbjct: 242 KPHDAELGLPVWN-SFQAANMRQVAPMVTPAYPAMNSTLSVSRQTLQILHEEFCRGHNVV 300
Query: 358 EDIYN-------------GKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIE 404
+ +Y +W +LFE +FF Y +YL L S D W G +E
Sbjct: 301 DKLYKDFQKGALDKDKIESGDIWKELFEPSDFFIGYPYYLSLCIVGPSQADAQAWAGFVE 360
Query: 405 SKVRHLI 411
S++R L+
Sbjct: 361 SRLRKLV 367
>gi|323453660|gb|EGB09531.1| hypothetical protein AURANDRAFT_24142, partial [Aureococcus
anophagefferens]
Length = 402
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 233/396 (58%), Gaps = 26/396 (6%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGA 121
E+D EL R V+ +L L + W++ V AK + +A + GGK+YT GSYRL VH GA
Sbjct: 8 ESDGELRRRERVMGELKRLFQAWVRSVCKAKGLSDELASEAGGKLYTSGSYRLRVHEPGA 67
Query: 122 DIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAR 181
DID++CVAP H R D+F + L +V +LR+VE A VP++ + DG+ ID+LFA
Sbjct: 68 DIDSICVAPNHCTREDFFDTLKAMLLEHPQVENLRSVETAVVPIMTFDLDGVNIDLLFAH 127
Query: 182 LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVP-NIENFRLALRTIKLWA 240
L L IP +D+ +D +L+ +D+ +SLNG RVT+ I +LV N E+F LR ++WA
Sbjct: 128 LPLNAIPASLDIDEDAVLQGVDEATEKSLNGPRVTNLIYKLVSHNYESFLQVLRVARVWA 187
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPD 300
K+ GIYSN LGY GG+++ +LVA ICQL+P A S L+CKFF +F++W WP P +L +P
Sbjct: 188 KRRGIYSNKLGYFGGINFNILVALICQLFPKATPSYLLCKFFAIFAKWDWPAPAILCRPL 247
Query: 301 NVNLGFPVWDP-----RVNVAD---RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQ 352
+ GF VW R +A R +LMPI+TPAYP NS NV+ + ++++EF +
Sbjct: 248 DHGYGFEVWGQNAEQLRGRMAYHNLRNNLMPIVTPAYPAMNSAANVNPWSFAVLRDEFAR 307
Query: 353 GKTISEDIYN---------------GKTMWDKLFETPNFFTKYRHYLVL-IASSVSAEDQ 396
G + + I G +WD+L E +FF KY YL + + ED
Sbjct: 308 GAEVCKRIVARHAELAENGAVDPDVGGPLWDELVEKTDFFDKYDAYLAVNVLGDGEKEDF 367
Query: 397 LEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTD 432
+ G + S++R L+ + P + + H+ P+ Y +
Sbjct: 368 DNFKGFLSSRLRKLVEKMGHLP-LKMIHLFPKEYPE 402
>gi|397574427|gb|EJK49202.1| hypothetical protein THAOC_31949 [Thalassiosira oceanica]
Length = 843
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 238/437 (54%), Gaps = 49/437 (11%)
Query: 59 NVS-ETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVH 117
NVS E+ E + +R VL ++ L +EW++ V+I + + P A+ GG++YT GSYRLGVH
Sbjct: 45 NVSLESSEGIKTRERVLVQMGRLHREWVRSVAIKRGLSPDAADSAGGELYTSGSYRLGVH 104
Query: 118 HKGADIDALCVAPRHVDRADYFSSFF-------------------------EKLKTVDEV 152
GADID + VAP R D+F S + E+++ V
Sbjct: 105 EPGADIDTIAVAPSFCSRDDFFGSNYVPPGDAMDEGDDEDGEQARDPDSLAERIRRQPHV 164
Query: 153 TDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNG 212
T+ VE A VP++ +++GI ID+LFARL+ IP + D+ +D++L +D +SLNG
Sbjct: 165 TNFVPVENAAVPILTFDWEGINIDLLFARLSTSSIPRNFDIDNDLVLSGVDAATEKSLNG 224
Query: 213 CRVTDEILRLVPNIEN----FRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
RVT+ I LV E F +R ++ WAK G+YSN +GY GGV+ M VA + QL
Sbjct: 225 PRVTNLIAALVGGTEQRYQTFLTVVRLVRKWAKNRGLYSNKMGYWGGVNINMAVALVLQL 284
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ + KFFLVF W+WP PV+L +P + LG VW+ A+ + P+ITPA
Sbjct: 285 YPNACPASALRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSH-QAANMRQVAPMITPA 343
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIY-------------NGKTMWDKLFETPN 375
YP NST +VS T I+ EEF +G I + +Y MW +LFE +
Sbjct: 344 YPAMNSTLSVSRQTLQILHEEFCRGHGIVDKLYKDYQRGAIDPADVESGGMWGELFEPSD 403
Query: 376 FFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGN-LERNPHINLAHVNPE----CY 430
FF Y +YL L + + D W G +ES++R L+ + L R+ ++ + P+ C
Sbjct: 404 FFIAYPYYLSLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQLWPKKFDVCC 463
Query: 431 TDTTGVIANGSGSPEIT 447
D T ++ + + IT
Sbjct: 464 ADKTALLTHAQRANSIT 480
>gi|240274559|gb|EER38075.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus H143]
Length = 493
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/429 (37%), Positives = 242/429 (56%), Gaps = 43/429 (10%)
Query: 175 IDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALR 234
ID+++ARL + +P ++DLR+ LL+ LD+K +R +NG RVTDEIL LVP + FRLALR
Sbjct: 51 IDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALR 110
Query: 235 TIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPV 294
IKLWA++ IYSN++G+ GGV+WAMLVAR+CQLYP A S +V KFF + +QWKWPQPV
Sbjct: 111 AIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPV 170
Query: 295 LLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGK 354
LLK + L VW+P++ D+YHLMPIITPAYP +T NVS+ST+T++ E K+G
Sbjct: 171 LLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGG 230
Query: 355 TISEDIYNGKTMWDKLFETPNFFTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGN 413
I++ I+ G+ W+ LF FF++ Y++YL + ++S S + Q W GL+ESK+RHL+G
Sbjct: 231 DIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGA 290
Query: 414 LERNPHINLAHVNPECY------TDTTGVIANGSGSPEITAEG----------------- 450
L+R I +AH P+ + D ++ GS + A+G
Sbjct: 291 LDRKSSIEIAHPFPKGFERIHICKDEKEIVEVMGGSMKYQAKGTKTETTDESNDPQHTAA 350
Query: 451 KEEGGENTSPP----------VSGVASMWFIGLDF----IAANVILNLTYDIQHFTNAVH 496
+ GGE P + + ++IGL+ A+ L+++ D F +
Sbjct: 351 SQNGGEAIKMPETDHPNGDNGCTLYTTTYYIGLELKPLVPGASRSLDISADTHIFKSTCT 410
Query: 497 WQATQSKMMKDGMKIEVRHVKKKQLSE--YLPAHMLKKDKKTKSGDQNTSAKKRKSDQAL 554
A + D + + HV+ L E + P + K K ++ ++++ AL
Sbjct: 411 SWAQYQPGIND---LNITHVRNYDLPEDVFQPGEVRPSRPKKKVVKKSEPTAQKRNIHAL 467
Query: 555 DELGDKSRP 563
D P
Sbjct: 468 DNEAPSENP 476
>gi|123495483|ref|XP_001326753.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909672|gb|EAY14530.1| hypothetical protein TVAG_388620 [Trichomonas vaginalis G3]
Length = 494
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 145/389 (37%), Positives = 232/389 (59%), Gaps = 4/389 (1%)
Query: 40 PNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVA 99
P +LQ + EL + Y+ T+E+ + R EVLSK+ L+ E+++ ++
Sbjct: 17 PTGAELQASIELQRFIDKYDAPATEEQKTKRQEVLSKIKILINEFVRIIAKKTGNTAEGL 76
Query: 100 EKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVE 159
E V ++ +GSYRLGV +G+DID + VAP V R+D+F++F+E + V +L VE
Sbjct: 77 ENVESQLVPYGSYRLGVVSEGSDIDCIVVAPSFVKRSDFFNTFYEMMINHPSVKELVKVE 136
Query: 160 EAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEI 219
A+ P++ ++DGIEID+ FA LA+ + +D D DD +L N+D++ VRSLNG RV D +
Sbjct: 137 NAYSPIMSFHYDGIEIDLSFASLAMTTVAEDTDFADDHILDNVDEESVRSLNGRRVNDML 196
Query: 220 LRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVC 279
L+LVPN + FR+ LR +++WAKK +Y NV GYLGGV+ A+L A ICQ YP + + ++
Sbjct: 197 LQLVPNQDIFRVVLRFLRIWAKKRCVYGNVFGYLGGVNLAILAAFICQRYPKKSPAYIIV 256
Query: 280 KFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVS 339
FF + W WP+P+ + P N WDP D MPIITPAYP NS + +
Sbjct: 257 MFFNDLATWTWPEPIYINTPTTGNRS--NWDP-TRQQDHKDCMPIITPAYPTINSLHSAT 313
Query: 340 ISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEW 399
S+R M EFK+G ++ + W+++ ++P FF ++R ++ ++ + + E+
Sbjct: 314 KSSRNRMTVEFKRGFKVASACLKSEASWERIIDSPKFFVRHRKFVEVLVVATEEKVYTEF 373
Query: 400 CGLIESKVRHLIGNLERN-PHINLAHVNP 427
++S+VR L N+E H++ A++ P
Sbjct: 374 MKFVQSRVRFLAINIETQLRHVSHAYIWP 402
>gi|428168831|gb|EKX37771.1| hypothetical protein GUITHDRAFT_158559 [Guillardia theta CCMP2712]
Length = 338
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 147/325 (45%), Positives = 205/325 (63%), Gaps = 4/325 (1%)
Query: 59 NVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEK-VGGKIYTFGSYRLGVH 117
N+ ++ E + R+ L+KLN + ++++K V N+ +E+ ++ TFGSYRL VH
Sbjct: 5 NLLPSESESARRVRTLAKLNEMCRDFVKRVYEKNNLMEQYSEENPPYQLRTFGSYRLDVH 64
Query: 118 HKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDM 177
GAD+D + + RH+ R D F+ + ++ ++T+L V+EA VPVIK D E D+
Sbjct: 65 LPGADMDTVMIVTRHIHRDDMFNDLYVAMQARKDITNLIKVQEARVPVIKFQMDEFEFDL 124
Query: 178 LFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIK 237
ARL+ IP+D D+ DD LKN+DQ+ V SLNG RVTD I LVP ++ + +R +K
Sbjct: 125 AMARLSYATIPEDFDVTDDKHLKNVDQQSVTSLNGVRVTDTIRSLVPTMKTLKYCIRALK 184
Query: 238 LWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK 297
LWAKK G+Y NVLG+LGG+S ++ ARI QLYP A S L+ FF +SQWKWPQPV L
Sbjct: 185 LWAKKRGVYKNVLGFLGGISLEIMAARIGQLYPKALPSRLLYFFFFTYSQWKWPQPVGLT 244
Query: 298 K--PDNVNLGFPVWD-PRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGK 354
+ ++ +L PVW ++DR HLMPIITP YP QN+T NVS ST +MQEEF + K
Sbjct: 245 EVIANSHDLNLPVWGFGATEMSDRRHLMPIITPCYPAQNATANVSKSTLKVMQEEFTRAK 304
Query: 355 TISEDIYNGKTMWDKLFETPNFFTK 379
I + I G W LFE + F+K
Sbjct: 305 DICKQILEGNAEWSDLFEPLDPFSK 329
>gi|82655167|emb|CAJ43765.1| poly(A) polymerase alpha [Oncorhynchus mykiss]
Length = 167
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/167 (78%), Positives = 149/167 (89%)
Query: 161 AFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEIL 220
A VPVIK++FD IEID+LFARLAL+ IP+++DLRDD LLKNLD +C+RSLNGCRVTDEIL
Sbjct: 1 AVVPVIKLSFDSIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEIL 60
Query: 221 RLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCK 280
LVPNIENFRL LRTIKLWAK+H IYSN+LG+LGGVSWAMLVAR CQLYPNA ASTLV K
Sbjct: 61 HLVPNIENFRLTLRTIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVHK 120
Query: 281 FFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
FFLVFS+W+WP PVLLK+P++ NL PVW PRV +DRYHLMPIITP
Sbjct: 121 FFLVFSKWEWPNPVLLKQPEDCNLNLPVWGPRVTPSDRYHLMPIITP 167
>gi|440487552|gb|ELQ67335.1| Poly(A) polymerase pla1 [Magnaporthe oryzae P131]
Length = 484
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 190/279 (68%), Gaps = 4/279 (1%)
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA-LKEIPDD--MDLRDDMLLKNLDQKC 206
+ +TDL V +AFVP+IK F GI ID++F+R+A +K++P D +L D LL+ LD+K
Sbjct: 5 NAITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGLDEKE 64
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARIC 266
+RS+NG RVTDEI+ LVP FR ALR IKLWA++ IY N++G+ GGV+WAMLVAR+C
Sbjct: 65 LRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLVARVC 124
Query: 267 QLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIIT 326
QLYP A AS +V KFF + +W WPQPVLLK ++ L +W+P++ DRYHLMPIIT
Sbjct: 125 QLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIIT 184
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK-YRHYLV 385
PAYP +TFN++ S++ ++ E + ++ I GK W LF+ FFTK +++Y+
Sbjct: 185 PAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFKYYIQ 244
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
+IA+S E W G +ESKVR L+ LER+ I +A
Sbjct: 245 VIAASKDKESHKLWSGFVESKVRLLVQGLERHESIAVAR 283
>gi|224004590|ref|XP_002295946.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585978|gb|ACI64663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 532
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/388 (40%), Positives = 217/388 (55%), Gaps = 46/388 (11%)
Query: 67 LSSRMEVLSKLNNLVKEWIKEVSIAKN------------IPPTVAEKVGGKIYTFGSYRL 114
+ R VL L +++ W E AKN +PPT + + +FGSYRL
Sbjct: 1 MRKRKRVLRDLEDMLCRWSDETFFAKNAALNDDDNTNRKVPPTSSPA----LLSFGSYRL 56
Query: 115 GVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIE 174
VH +DID L +AP H+ R D+F+++ L+ V +L V A+ PVIK +G++
Sbjct: 57 SVHTPSSDIDCLVLAPPHLTRDDFFTTWVTALQNEARVKELHPVSGAYTPVIKFEIEGVK 116
Query: 175 IDMLFARL---------ALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLV-- 223
ID++FARL L EI +M+L DD LL LD+ VRS+NG RV +L +
Sbjct: 117 IDLIFARLNEPTINNHDELDEI-KEMEL-DDTLLIGLDETSVRSINGVRVAQYLLSTLET 174
Query: 224 -----------PNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNA 272
++NFRL LR +K WA+ HG+YSNVLG+LGGV+WA+LV +C+ YP+A
Sbjct: 175 TDKNRKNYDSATQVDNFRLTLRAVKEWARVHGLYSNVLGFLGGVNWAILVCWVCKRYPDA 234
Query: 273 AASTLVCKFFLVFSQWKWPQPVLL-----KKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
ASTL+ FF FS WKWP PVLL + P+ VN PVWDP N D HLMPIITP
Sbjct: 235 PASTLLQIFFKTFSTWKWPMPVLLSTQKQRPPEGVN-NLPVWDPSSNFRDAKHLMPIITP 293
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
YP NS++NV +++EF + + D+ G W LFE FF ++ +YL +
Sbjct: 294 CYPSMNSSYNVGEPQLRRLRDEFARASKLCSDVAFGTKKWGVLFEWNEFFQQHANYLQVD 353
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLE 415
+ + +D W GL E+++R LI LE
Sbjct: 354 TVATNEDDFRAWFGLCEARMRLLIAGLE 381
>gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130 [Aureococcus anophagefferens]
Length = 449
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 235/451 (52%), Gaps = 59/451 (13%)
Query: 22 QSQAPVTY-GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
S+AP + G+T +N P + D + L L+ V E+D + R VL +L +
Sbjct: 5 SSEAPKAHLGVTPPINTDMPAEHDAAASEALVHTLRELGVYESDAGKAVRTGVLDRLRAI 64
Query: 81 VKEWIK-----------------EVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADI 123
W + E ++A + PP ++ TFGS RL VH ADI
Sbjct: 65 ADAWCENEWALAIAERACDGADCERALAASAPPRC------ELRTFGSVRLDVHTPDADI 118
Query: 124 DALCVAPRHVDRADYFSSFFEKLKTVDEVT--DLRAVEEAFVPVIKMNFDGIEIDMLFAR 181
D + VAPRH R +F + L+ + + AV +A+ PV+K+ ++D+LFA
Sbjct: 119 DVVLVAPRHCTRRAFFDTLVAALEGDAHIGAGGVMAVRDAYTPVVKLRVGATDVDLLFAP 178
Query: 182 LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAK 241
LA E+P+ +D+ DD +L+ LD+ +RSLNG RV + +L LVP+ FR+ALR +K WA+
Sbjct: 179 LACDELPEPLDVMDDAVLEGLDEAAIRSLNGARVAEMLLSLVPDPAVFRVALRAVKRWAR 238
Query: 242 KHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKP-- 299
G+YSNVLG LGGV+ A+L A +CQ YPNAA ST+V +FF +F W WP PVL+ P
Sbjct: 239 CKGLYSNVLGLLGGVNCAILAAFVCQRYPNAAPSTVVGRFFRIFDGWDWPNPVLIAAPGA 298
Query: 300 -------DNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQ 352
++V + W+PR+N DR HL PI+TPA+P NS++NV +++E +
Sbjct: 299 PPSSAGDESVASRYAAWNPRLNPRDRAHLAPIVTPAHPTMNSSYNVGAPQLRAIKDELSK 358
Query: 353 GKTISEDI------------------YNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAE 394
G + + + + W +LF +FF ++RHY+ + S+
Sbjct: 359 GLETTRRVEKLAAHWRADESPTGDRAADLRDAWRRLFAPSDFFARHRHYVQVDVSAADDA 418
Query: 395 DQLEWCGLIESKVRHLI------GNLERNPH 419
+W ES++R+L+ G + PH
Sbjct: 419 GLRKWNAWCESRLRNLVVALDTPGYVRARPH 449
>gi|123480837|ref|XP_001323419.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121906284|gb|EAY11196.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 508
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 222/391 (56%), Gaps = 3/391 (0%)
Query: 40 PNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVA 99
P +D++ +R+L E L E + R V ++ +V ++I++V + K + P
Sbjct: 26 PTPIDIEASRKLVEFLDSAGAIADAEAMKHRQAVFETVSKIVDQFIEKVRVNKKMEPPEG 85
Query: 100 EKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVE 159
E GK++ GSY+LGV +DID + +AP+ V + ++FS F+E L +V L VE
Sbjct: 86 EVYKGKLFYSGSYKLGVCSPKSDIDCVILAPQFVQKEEFFSIFYELLAADTKVKGLIKVE 145
Query: 160 EAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEI 219
EA+VP+IK+ +D IE D+ FA L L I DD+DL D +L+NL + VR+LN RV + +
Sbjct: 146 EAYVPIIKLTYDDIEFDISFAALGLNNITDDIDLSPDSVLENLSKLSVRALNSLRVNNMV 205
Query: 220 LRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVC 279
++LVPN++NF+ L+ ++ WA K G+Y NV GY GGV+ A+L A +CQ YP A+ + L
Sbjct: 206 IKLVPNLDNFKTLLKFVRYWAFKRGLYGNVYGYFGGVNLAILSAFVCQRYPTASPAMLAL 265
Query: 280 KFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVS 339
FF SQW WP P+ + +P+ L WDP +D +MPIITPAYP NS + +
Sbjct: 266 YFFSEISQWTWPTPIYINRPNYGELL--SWDPTTE-SDHNDVMPIITPAYPSTNSQRSAT 322
Query: 340 ISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEW 399
S+R + +E + I +I G W + E FF Y++Y+ + + D W
Sbjct: 323 TSSRNRIIQEMVKALQIMPNIITGDLPWSAVCEDHEFFESYKNYIEIDIRAEGLADYNWW 382
Query: 400 CGLIESKVRHLIGNLERNPHINLAHVNPECY 430
G + SKV+ LI +LE + A + P +
Sbjct: 383 KGTVISKVKRLITSLEAIERVKCAPIFPSSF 413
>gi|340546035|gb|AEK51816.1| poly(A) polymerase alpha [Heteronotia binoei]
Length = 170
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/170 (81%), Positives = 156/170 (91%)
Query: 119 KGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDML 178
KGADIDALCVAPRHVDR+D+F+SF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+L
Sbjct: 1 KGADIDALCVAPRHVDRSDFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 179 FARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKL 238
FARLAL+ IP+D+DLRDD LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKL
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 239 WAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQW 288
WAK+H IYSN+LG+LGGVSWAMLVAR CQLYPNA ASTLV KFFLVFS+W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|402697301|gb|AFQ90838.1| polyA polymerase alpha, partial [Dendropicos gabonensis]
Length = 170
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 138/170 (81%), Positives = 156/170 (91%)
Query: 119 KGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDML 178
KGADIDALCVAPRHV+R+D+F+SF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+L
Sbjct: 1 KGADIDALCVAPRHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 179 FARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKL 238
FARLAL+ IP+D+DLRDD LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKL
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 239 WAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQW 288
WAK+H IYSN+LG+LGGVSWAMLVAR CQLYPNA ASTLV KFFLVFS+W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|146180895|ref|XP_001021673.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146144391|gb|EAS01427.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 1765
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 219/378 (57%), Gaps = 15/378 (3%)
Query: 58 YNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVH 117
Y SET+EE + E L +L ++++WI+ ++ N T GG++ FGSY+L V+
Sbjct: 1144 YKYSETEEETKQKDEKLKQLRQIIRDWIQAIAEENNHQLTF----GGELLFFGSYKLKVN 1199
Query: 118 HKGADIDALCVAPRHVDR-ADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEID 176
+DID +C+ P VDR +F L+ EVT+L ++EA VP+IKM F GI D
Sbjct: 1200 SHDSDIDTVCLVPNFVDRDQHFFGDLVNILQNRKEVTELFPIKEASVPIIKMKFSGILFD 1259
Query: 177 MLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRL--VPNIENFRLALR 234
+ FAR + +++DL + +L ++D++ RS NGCRV + ++R + N ENF++ L+
Sbjct: 1260 LSFARAPPQYNGENIDLTSNQMLLSMDERSYRSFNGCRVAEWLIRKDNIQNYENFKITLK 1319
Query: 235 TIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQ-P 293
IKLWA GIYSN++GYL G+ W +LVA+ICQLYPN + L+ +FF ++S WKW P
Sbjct: 1320 CIKLWATNRGIYSNIIGYLSGIGWTILVAKICQLYPNYPPNQLIERFFFLYSHWKWHDLP 1379
Query: 294 VLLKKPD----NVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEE 349
V ++ N L W P DR +M IITP +P N+ NVS +T I+QE+
Sbjct: 1380 VYVEHIQEDVANTKLNADQWRPE--FRDRNSMM-IITPCFPCMNTAHNVSPTTLRIIQEQ 1436
Query: 350 FKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRH 409
+ G I I + + LF+ NFF +Y+H+L + + + D + W G +ES++R
Sbjct: 1437 LQYGNRIINKIKKNEKTFSDLFKPFNFFKRYKHFLQINIVATNKNDHIVWKGHVESRLRK 1496
Query: 410 LIGNLERNPHINLAHVNP 427
L E++ H L V+P
Sbjct: 1497 LTKLFEQSIHNKLIQVHP 1514
>gi|348669628|gb|EGZ09450.1| hypothetical protein PHYSODRAFT_304981 [Phytophthora sojae]
Length = 695
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 222/403 (55%), Gaps = 12/403 (2%)
Query: 37 LSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPP 96
LSPPN+ DL+ T L +C+ T E+LS++ V+++L +V W++ A
Sbjct: 166 LSPPNEYDLRSTNGLMKCVNAIAPLPTPEQLSAKHLVINELQRIVDIWLRRTLDALEGAT 225
Query: 97 TVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLR 156
+ GS+ L V +D+D + P + +FSS E L V+DL
Sbjct: 226 ETKSTETATLLLGGSWHLKVGMAESDLDVVAFMPHAITSEIFFSSLCEHLGKEASVSDLV 285
Query: 157 AVEEAFVPVIKMNFDGIEIDMLFARLALKE-IPDDMDL---RDDMLLKNLDQKCVRSLNG 212
A +A VPV+ + +D+LFAR A K+ +P + D +++ +D VRSL+
Sbjct: 286 ARRKAAVPVLSFQLSSVRVDLLFARYAQKQAVPKHLPFLPGDDVQVMRGMDATSVRSLSV 345
Query: 213 CRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNA 272
RV IL LVPN FR LR I+LWA++ G+YSN GYLGG+SWA+LV +CQ++P A
Sbjct: 346 ARVASLILELVPNASVFRSTLRVIRLWARRRGLYSNKAGYLGGISWALLVCFVCQMFPRA 405
Query: 273 AASTLVCKFFLVFSQWKWPQPVLLKKPDN---VNLGFPVWDPRVNVADRYHLMPIITPAY 329
+ ++LV +FF V + W+WP P+L+ P N V+ G WDP N+ DR HLMPIITP +
Sbjct: 406 SVASLVHRFFSVLASWRWPTPILVAHPSNGGKVDNGVQ-WDPAHNIHDRAHLMPIITPGF 464
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDI----YNGKTMWDKLFETPNFFTKYRHYLV 385
P N+ NV++ST +++EEF +G+ I +D+ + + W++LF +Y H++
Sbjct: 465 PAVNTAVNVNLSTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHIA 524
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE 428
+ + + E EW + S+ R L+ L+ P + H PE
Sbjct: 525 IELRAPNEEALAEWSSFVASRTRKLVETLQHTPSVATLHPLPE 567
>gi|397635329|gb|EJK71816.1| hypothetical protein THAOC_06705 [Thalassiosira oceanica]
Length = 629
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 234/421 (55%), Gaps = 45/421 (10%)
Query: 36 NLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEW----IKEVSIA 91
N+SP ++ L + L + N+ E+++ + R + + KL ++++W +K
Sbjct: 81 NISPEDEERLSSS--LLDVCTARNLIESEDGTARRKKAMRKLQRMLQDWSGSLVKGKKAK 138
Query: 92 KNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE 151
K + + +FGSYRLGVH AD+D L +APRH R D+F S+ LK
Sbjct: 139 KARAKAAGAETPPILLSFGSYRLGVHTPDADVDCLVLAPRHATRDDFFGSWVRILKQKKG 198
Query: 152 VTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA----LKEIPD----------------DM 191
V DL V A+ PVIK DG++ID++FA ++ L+E ++
Sbjct: 199 VEDLHPVSSAYTPVIKFVMDGVKIDLIFASISNEVWLREHAQCVKSGDGGAEDGGSEREV 258
Query: 192 DLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPN---IENFRLALRTIKLWAKKHGIYSN 248
D+ DD LL LD+ VRS+NG RV +L + + +EN+RL LR +K WA+ G+YSN
Sbjct: 259 DV-DDSLLVGLDEASVRSVNGVRVAQYLLSTMSSPRQLENYRLTLRAVKEWARVQGMYSN 317
Query: 249 VLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK-------KPDN 301
VLGYLGGV+WA+LV +C +P+A+++ L+ FF F+ W WP PV+L P N
Sbjct: 318 VLGYLGGVNWAILVCFVCIRHPDASSARLLHLFFETFANWNWPDPVMLTPEASRHVPPRN 377
Query: 302 VNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIY 361
V+ PVWDPR N D+ H+MPIITP YP NS+FNV M++EF++ +S +I
Sbjct: 378 VD-ARPVWDPRENYRDKLHVMPIITPCYPSMNSSFNVGEPGLRRMRDEFRRAARVSREIL 436
Query: 362 -------NGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNL 414
+GK W LFE FF ++ YL + ++ + ++ L W GL E+++R LI L
Sbjct: 437 SGTATGEDGKKGWSSLFERSGFFGQHGAYLRVDVAATTEDEFLRWFGLCEARMRLLIAGL 496
Query: 415 E 415
E
Sbjct: 497 E 497
>gi|402697299|gb|AFQ90837.1| polyA polymerase alpha, partial [Cyrtodactylus sp. JJF-2012]
Length = 170
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/170 (81%), Positives = 155/170 (91%)
Query: 119 KGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDML 178
KGADIDALCVAPRHVDR+D+F+S +EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+L
Sbjct: 1 KGADIDALCVAPRHVDRSDFFTSXYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 179 FARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKL 238
FARLAL+ IP+D+DLRDD LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKL
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 239 WAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQW 288
WAK+H IYSN+LG+LGGVSWAMLVAR CQLYPNA ASTLV KFFLVFS+W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|402697303|gb|AFQ90839.1| polyA polymerase alpha, partial [Malaclemys terrapin]
Length = 170
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/170 (80%), Positives = 153/170 (90%)
Query: 119 KGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDML 178
KGADIDALCVAPR VDR+D+F+SF+EK K +EV DLRAVEEAFVPVIK+ FDGIEID+L
Sbjct: 1 KGADIDALCVAPRXVDRSDFFTSFYEKXKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 179 FARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKL 238
FARLAL+ IP+D+DLRDD LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKL
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 239 WAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQW 288
WAK+H IYSN+LG+ GGVSWAMLVAR CQLYPNA ASTLV KFFLVFS+W
Sbjct: 121 WAKRHNIYSNILGFXGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|301111045|ref|XP_002904602.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
gi|262095919|gb|EEY53971.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
Length = 677
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 222/405 (54%), Gaps = 16/405 (3%)
Query: 37 LSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPP 96
L PP + DL+ T L +C+ T E++S++ +++L +V W++
Sbjct: 147 LVPPTEYDLRSTNGLTKCVNAIAPMPTAEQMSAKHLAINELQRVVDIWLRRTLDKLATDS 206
Query: 97 TVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLR 156
+ GS+ L V + +D+D + P V +FSS E L V+DL
Sbjct: 207 ETKSTETATLLLGGSWHLKVGNAESDLDVVAFMPHTVTAEIFFSSLCEHLGQESSVSDLV 266
Query: 157 AVEEAFVPVIKMNFDGIEIDMLFARLALKE-IPDDMDL--RDDM-LLKNLDQKCVRSLNG 212
A +A VPV+ + + ID+LFAR A ++ +P + DDM +++ +D VRSL+
Sbjct: 267 ARRKAAVPVLSFQLNSVRIDLLFARYAQQQAVPKHLPFLPGDDMQVMRGMDATSVRSLSV 326
Query: 213 CRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNA 272
RV IL LVPN +R LR I+LWA++ G+YSN G+LGG+SWA+LV +CQ++P A
Sbjct: 327 ARVASLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGGISWAILVCFVCQMFPRA 386
Query: 273 AASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPV-----WDPRVNVADRYHLMPIITP 327
+ ++LV +FF V + W+WP P+L+ P N G WDP+ N+ DR HLMPIITP
Sbjct: 387 SVASLVHRFFSVLATWRWPTPILVAHPSN---GGKTDQEVQWDPQHNIHDRAHLMPIITP 443
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDI----YNGKTMWDKLFETPNFFTKYRHY 383
+P N+ NV+IST +++EEF +G+ I +D+ + + W++LF +Y H+
Sbjct: 444 GFPAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHH 503
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE 428
+ + + + E EW + S+ R L+ L+ P I+ H P+
Sbjct: 504 VAIELRAPNEEALAEWSSFVASRTRKLVETLQHTPSISALHPLPD 548
>gi|301092990|ref|XP_002997344.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262110742|gb|EEY68794.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 677
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 222/405 (54%), Gaps = 16/405 (3%)
Query: 37 LSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPP 96
L PP + DL+ T L +C+ T E++S++ +++L +V W++
Sbjct: 147 LVPPTEYDLRSTNGLTKCVNAIAPMPTAEQMSAKHLAINELQRVVDIWLRRTLDKLATDS 206
Query: 97 TVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLR 156
+ GS+ L V + +D+D + P V +FSS E L V+DL
Sbjct: 207 ETKSTETATLLLGGSWHLKVGNAESDLDVVAFMPHTVTAEIFFSSLCEHLGQESSVSDLV 266
Query: 157 AVEEAFVPVIKMNFDGIEIDMLFARLALKE-IPDDMDL--RDDM-LLKNLDQKCVRSLNG 212
A +A VPV+ + + ID+LFAR A ++ +P + DDM +++ +D VRSL+
Sbjct: 267 ARRKAAVPVLSFQLNSVRIDLLFARYAQQQAVPKHLPFLPGDDMQVMRGMDATSVRSLSV 326
Query: 213 CRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNA 272
RV IL LVPN +R LR I+LWA++ G+YSN G+LGG+SWA+LV +CQ++P A
Sbjct: 327 ARVASLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGGISWAILVCFVCQMFPRA 386
Query: 273 AASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPV-----WDPRVNVADRYHLMPIITP 327
+ ++LV +FF V + W+WP P+L+ P N G WDP+ N+ DR HLMPIITP
Sbjct: 387 SVASLVHRFFSVLATWRWPTPILVAHPSN---GGKTDQEVQWDPQHNIHDRAHLMPIITP 443
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDI----YNGKTMWDKLFETPNFFTKYRHY 383
+P N+ NV+IST +++EEF +G+ I +D+ + + W++LF +Y H+
Sbjct: 444 GFPAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHH 503
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE 428
+ + + + E EW + S+ R L+ L+ P I+ H P+
Sbjct: 504 VAIELRAPNEEALAEWSSFVASRTRKLVETLQHTPSISALHPLPD 548
>gi|324504415|gb|ADY41908.1| Poly(A) polymerase gamma [Ascaris suum]
Length = 560
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/352 (40%), Positives = 206/352 (58%), Gaps = 43/352 (12%)
Query: 252 YLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK-------KPDNVNL 304
+LGGVSWA+LVAR CQLYPNAA + L+ KFFLVF++W+WP PVLLK PD +
Sbjct: 50 FLGGVSWAILVARTCQLYPNAAPAKLIQKFFLVFTRWEWPHPVLLKDCDQTPRPPDMQSF 109
Query: 305 GFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGK 364
VWDPR DRYHLMPIITPA+P+QNSTFNV+ STR ++ E ++G I+ +I +GK
Sbjct: 110 QELVWDPRTRSCDRYHLMPIITPAFPEQNSTFNVTKSTRQVIMNELEEGLAITIEILSGK 169
Query: 365 TMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
W KLF+ NFF++Y+H++VL+ + + DQL W GL+ESK+RHLIGNLERNP ++L H
Sbjct: 170 AEWSKLFDEVNFFSRYKHFIVLLCVAANENDQLVWSGLVESKIRHLIGNLERNPCVSLCH 229
Query: 425 VNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF---IAANVI 481
+NP+ +T + + EI+ E MWFIG++ + N+
Sbjct: 230 INPQHFTPISPLPI------EISIENP-------------CCQMWFIGMELNKQLKKNI- 269
Query: 482 LNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQ 541
+LT +IQ F +AV A + GM + +V++ L +LP L + +
Sbjct: 270 -DLTDEIQQFNDAVMRAADFQNVYCPGMAVLPSYVRRADLHLWLPRSELSRGR------- 321
Query: 542 NTSAKKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTED 593
+ KK + AL + S P S+ + +NIS+ ++S+ C+ D
Sbjct: 322 -AATKKNRIVAAL----NASSPLHTPPSSQNPPQNSNISSRDRRTSASCSMD 368
>gi|391331065|ref|XP_003739971.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 493
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 153/427 (35%), Positives = 235/427 (55%), Gaps = 29/427 (6%)
Query: 9 SMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELS 68
S+ TS+ +D +P APV Y T R+L K Y E + +S
Sbjct: 14 SLLTSRSLRDHEP---APVEYCHLT------------HSLRQLLYQQKQY---ECERRVS 55
Query: 69 SRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCV 128
R EV++++ + ++ W+ + +K + + ++ FGS RLGV +DID V
Sbjct: 56 ERHEVINRMLSFLRAWLFSMMESKGLREALNSMPTFRLRQFGSLRLGVQDFYSDIDLCFV 115
Query: 129 APRHVDRADYFSSFFEKLKTVD-EVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI 187
APR V R ++F+ F L+ E+T L + A+VPVI+ I++D++FAR + EI
Sbjct: 116 APRWVTREEFFTGFPRMLEQYSHEITKLSVLPSAYVPVIRATCHDIQVDIVFARTEVDEI 175
Query: 188 PDDMDLRDDMLLKNL--DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGI 245
++DL +++L D +CVRSLNG RVT+ +LR VP F+LAL+ I+ WAK I
Sbjct: 176 SRELDLLAGANIESLISDIRCVRSLNGYRVTEMVLRFVPRYRVFQLALKAIRYWAKCQKI 235
Query: 246 YSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLG 305
YS+ LGYLGGVSWA+LVA++C ++P A A+ ++ KFFLV SQW+WP+PV+L P+ +
Sbjct: 236 YSHTLGYLGGVSWAILVAKVCTMFPKAGAARILNKFFLVMSQWRWPEPVML-LPEGYGVS 294
Query: 306 FPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKT 365
+W D +MPIITP YPQQNS+FNVS ST +M+ +G I++DI +
Sbjct: 295 SQLWSITQMPWD---IMPIITPVYPQQNSSFNVSKSTLLVMKNALTEGVRITDDILMERC 351
Query: 366 MWDKLFETPNFFTKYRHYLVL--IASSVSAEDQLEWCGLIESKVRHLIGNLERNPH--IN 421
W F + Y HY+VL + ++ W +E ++ + ++ I
Sbjct: 352 DWKSFFHPVHIADMYEHYVVLQTFRYTTDPHEKELWIMSVERSMKKFLNGIDACARCAIK 411
Query: 422 LAHVNPE 428
HV+P+
Sbjct: 412 YLHVSPD 418
>gi|219117850|ref|XP_002179712.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408765|gb|EEC48698.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 336
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/339 (40%), Positives = 195/339 (57%), Gaps = 31/339 (9%)
Query: 70 RMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVA 129
R VL+++ L ++WI+ V I K + V GG+++T GSYRLGVH GADID + V+
Sbjct: 1 RERVLNRMGELCRDWIRTVCIKKGLSTDVVNVAGGQLFTSGSYRLGVHEPGADIDTILVS 60
Query: 130 PRHVDRADYF-----------------SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDG 172
P R D+F +S E+++T +VT+ VE A VP++ +++G
Sbjct: 61 PNACQRMDFFGTTILSTVEGEEGTRDPTSLAERIRTHPDVTNFVPVESAAVPILTFDWEG 120
Query: 173 IEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNI----EN 228
I ID+LFARL +P D D+ +D +L D +SLNG RVT+ I LV +
Sbjct: 121 INIDLLFARLNTASVPPDFDIDNDAVLDGADGATEKSLNGPRVTNLIAALVSGTPQRYQV 180
Query: 229 FRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQW 288
F +R ++ WAK G+YSN +GY GGV+ + VA + QLYPNA ++L+ KFFLVF W
Sbjct: 181 FLTVVRCVRKWAKARGLYSNKMGYWGGVNINIGVALVVQLYPNACGASLLRKFFLVFKTW 240
Query: 289 KWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQE 348
+WPQP+LL KP + G PVW V A R + P+ITPAYP NST VS T I+QE
Sbjct: 241 RWPQPLLLTKPHDAGYGLPVWS--VATAVR-QVAPMITPAYPAMNSTLAVSRQTLQILQE 297
Query: 349 EFKQGKTISEDIYNG-------KTMWDKLFETPNFFTKY 380
EF +G T+ + ++ + W+ LFE +FF Y
Sbjct: 298 EFNRGHTVVDQLWKDYQKNPAQELNWNTLFEPSDFFINY 336
>gi|348680417|gb|EGZ20233.1| hypothetical protein PHYSODRAFT_442904 [Phytophthora sojae]
Length = 343
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/367 (39%), Positives = 208/367 (56%), Gaps = 40/367 (10%)
Query: 195 DDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLG 254
DD L+ LD+ VRS NG RVT+ IL+LVPN E FR L +K WA+ GIYSNVLG+LG
Sbjct: 3 DDRYLRGLDESSVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARVRGIYSNVLGFLG 62
Query: 255 GVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN-VNLGFPVWDPRV 313
GV+WA+LVARICQ YPN+ ++L+ +FF ++ W WP P++L + DN +NLGF W+P++
Sbjct: 63 GVNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKI 122
Query: 314 NVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFET 373
NV DR HLMPIITPAYP NS++NV ST I++ EF +G + +I K+ W KLF
Sbjct: 123 NVRDRSHLMPIITPAYPALNSSYNVMASTLHILKAEFGKGFNRTLEIETKKSSWAKLFIA 182
Query: 374 PNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPEC---- 429
P FF + +H+L + ++ +AED W G +ES++RHL LE P + ++P
Sbjct: 183 PVFFQRSKHFLRVQITANNAEDFDGWFGWVESRLRHLFLRLEALPELR---IHPFARFFD 239
Query: 430 YTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVI-------- 481
+ +T G GS E+ S FIGL F A N +
Sbjct: 240 FGETKGATPEGSSKREVH------------------TSWLFIGLGFPAPNPVAATGGTHD 281
Query: 482 LNLTYDIQHFTNAV-HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD 540
++LT I+ F W+A GM +++ HV + Q+ E++ ++ +K
Sbjct: 282 VDLTSVIRDFAFYTDQWEARHG-----GMDMQIDHVTRSQIPEWVLESVVNGASDSKHLR 336
Query: 541 QNTSAKK 547
+ + KK
Sbjct: 337 KRSPTKK 343
>gi|294948940|ref|XP_002785971.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900079|gb|EER17767.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 505
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 230/396 (58%), Gaps = 25/396 (6%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + P + D + T EL ++ E+ + R EVL ++ +V +WI +VS
Sbjct: 36 GVTPPVSENYPTRADYEATEELRHFIENRAPPESSHGMLKRYEVLVEIERMVNKWIYDVS 95
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK-LKT 148
+ + K ++ TFGS+RLGV +DID L + P + R D+F+ F E L
Sbjct: 96 AGE-----IQSK--ARVLTFGSFRLGVITPMSDIDTLVLLPNSISRDDFFTDFVETMLNR 148
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
VT+ V A VP+IK+ + GI +D+L A + + D+D + L+ +++++C++
Sbjct: 149 SPHVTECNPVPAAHVPIIKVKYRGICMDILAACVPTHVLSGDVDSVQEELIYDVEKRCMK 208
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
S+NG RV D++L LV + + FRLA R IK WA++ IYSN +GY+GGVSWA++V R+CQL
Sbjct: 209 SMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGRVCQL 268
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPN +A +V +FF V+++W+W D N P+ R +DR+H+MP+ITP
Sbjct: 269 YPNYSAKQIVERFFFVYARWQW-----TATRDYGNSNVPL---RRYTSDRHHVMPVITPI 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKT---------MWDKLFETPNFFTK 379
+P N+T+NV S + ++ E K+G+ I E + K+ W L FF
Sbjct: 321 FPTHNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQV 380
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
YR +L+L S+ + + L++ GL+ES++R L+ NLE
Sbjct: 381 YRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLE 416
>gi|397621901|gb|EJK66507.1| hypothetical protein THAOC_12570 [Thalassiosira oceanica]
Length = 756
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 217/405 (53%), Gaps = 46/405 (11%)
Query: 77 LNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA 136
+ L +EW++ V+I + + P A+ GG++YT GSYRLGVH GADID + VAP R
Sbjct: 1 MGRLHREWVRSVAIKRGLSPDAADSAGGELYTSGSYRLGVHEPGADIDTIAVAPSFCSRD 60
Query: 137 DYFSSFF-------------------------EKLKTVDEVTDLRAVEEAFVPVIKMNFD 171
D+F S + E+++ VT+ VE A VP++ +++
Sbjct: 61 DFFGSNYVPPGDAMDEGDDEDGEQARDPDSLAERIRRQPHVTNFVPVENAAVPILTFDWE 120
Query: 172 GIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIEN--- 228
GI ID+LFARL+ IP + D+ +D++L +D +SLNG RVT+ I LV E
Sbjct: 121 GINIDLLFARLSTSSIPRNFDIDNDLVLSGVDAATEKSLNGPRVTNLIAALVGGTEQRYQ 180
Query: 229 -FRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQ 287
F +R ++ WAK G+YSN +GY GGV+ M VA + QLYPNA ++ + KFFLVF
Sbjct: 181 TFLTVVRLVRKWAKNRGLYSNKMGYWGGVNINMAVALVLQLYPNACPASALRKFFLVFKS 240
Query: 288 WKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQ 347
W+WP PV+L +P + LG VW+ A+ + P+ITPAYP NST +VS T I+
Sbjct: 241 WRWPNPVMLTRPHDAELGLQVWNSH-QAANMRQVAPMITPAYPAMNSTLSVSRQTLQILH 299
Query: 348 EEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKV 407
EEF +G I + +Y + + + P L + + D W G +ES++
Sbjct: 300 EEFCRGHGIVDKLYKD---YQRGRDRPGG--------RLCITGPTLHDAQAWAGFVESRL 348
Query: 408 RHLIGN-LERNPHINLAHVNPE----CYTDTTGVIANGSGSPEIT 447
R L+ + L R+ ++ + P+ C D T ++ + + IT
Sbjct: 349 RKLVSDMLGRSLPLSKIQLWPKKFDVCCADKTALLTHAQRANSIT 393
>gi|401881479|gb|EJT45778.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 2479]
gi|406696602|gb|EKC99884.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 8904]
Length = 573
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 258/511 (50%), Gaps = 96/511 (18%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++L PP + D++ SE ++ +LS + LV +++ +VS
Sbjct: 11 GVTPPISLDPPKEADVK-------------ASEVRVGAGAQSPLLSNIAQLVTKFVHDVS 57
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
I + VA + GG+IYT ++RLGVH G+DID +CV P+HV R +F F + L+
Sbjct: 58 IKNGLSEKVATEAGGRIYT-SAFRLGVHGPGSDIDTICVCPKHVYREHFFGEFQQMLRDW 116
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
T++ + AFVPV+K G+E+D+LFAR+ L E D +D+ D +L+ +D RS
Sbjct: 117 PACTEISS---AFVPVMKTVISGVEVDLLFARVNLPEAGDKLDIEKDEILRGVDDASQRS 173
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LN VTD IL LVP++ FR ALRTI+LWAK + GGV+WA+L ARICQLY
Sbjct: 174 LN---VTDMILNLVPDVATFRTALRTIRLWAKS---------FPGGVAWALLTARICQLY 221
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
PNAA ST+V KFF ++ QW MP+ITPAY
Sbjct: 222 PNAAPSTIVSKFFPIYYQW---------------------------------MPVITPAY 248
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS 389
P ST N++ ST TI++ E + K ++ N + W +LF +FF+ YR Y+ ++AS
Sbjct: 249 PSMCSTHNITQSTMTIIKNEMLRDKIVN----NPGSSWVELFTPVDFFSLYRTYVQVVAS 304
Query: 390 SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE---------CYTDTTGVIAN- 439
+ SA+D +W +R L+ +LE ++ LAH P+ C T+ A+
Sbjct: 305 ASSAQDLKDW-------LRTLVQDLEMTDNVLLAH--PQVNGISKTYICLTEEEQAQASQ 355
Query: 440 GSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF------IAANVILNLTYDIQHFTN 493
G PE +E+ + V +FIGLD LNL Y + F
Sbjct: 356 GELPPEAMMRKEEDYADKEHTKV--YTKNFFIGLDIEKKPKDGQQPRQLNLYYASKRFCF 413
Query: 494 AVHWQATQSKMMKDGMKIEVRHVKKKQLSEY 524
A + K + M + +R K+ +L +
Sbjct: 414 ACQ---SWDKYNEQDMSVILRPCKRSELPAF 441
>gi|294948934|ref|XP_002785968.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900076|gb|EER17764.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 436
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 229/396 (57%), Gaps = 25/396 (6%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++ + P + D + T EL ++ E+ + R EVL ++ +V +WI +VS
Sbjct: 36 GVTPPVSENYPTRADYEATEELRHFIENRAPPESSHGMLKRYEVLVEIERMVNKWIYDVS 95
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK-LKT 148
+ + K ++ TFGS+RLGV +DID L + P + R D+F+ F E L
Sbjct: 96 AGE-----IQSK--ARVLTFGSFRLGVITPMSDIDTLVLLPNSISRDDFFTDFVETMLNR 148
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
VT+ V A VP+IK+ + GI +D+L A + + D+D + L+ +++++C++
Sbjct: 149 SPHVTECNPVPAAHVPIIKVKYRGICMDILAACVPTHVLSGDVDSVQEELIYDVEKRCMK 208
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
S+NG RV D++L LV + + FRLA R IK WA++ IYSN +GY+GGVSWA++V R+CQL
Sbjct: 209 SMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGRVCQL 268
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPN +A +V +FF V+++W+W D N P R +DR+H+MP+ITP
Sbjct: 269 YPNYSAKQIVERFFFVYARWQW-----TATRDYGNSNAP---RRRYTSDRHHVMPVITPI 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKT---------MWDKLFETPNFFTK 379
+P N+T+NV S + ++ E K+G+ I E + K+ W L FF
Sbjct: 321 FPTHNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQV 380
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
YR +L+L S+ + + L++ GL+ES++R L+ NLE
Sbjct: 381 YRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLE 416
>gi|298710751|emb|CBJ32172.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 533
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 211/383 (55%), Gaps = 31/383 (8%)
Query: 31 MTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSI 90
M +N S P++ DL+ +L ++ T +L R +VL K+ + +W+ + ++
Sbjct: 28 MYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRAMFLQWVIDSAL 87
Query: 91 AKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVD 150
+ A+ GGKIYT GSYRL +H +DIDA+CVAP+ +F++ E+L
Sbjct: 88 EAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHP 147
Query: 151 EVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSL 210
V ++ A++ A VP+I++ FD I+ID+ A L + +P +D+ DD
Sbjct: 148 LVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQ------------- 194
Query: 211 NGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYP 270
VPN ++F +R ++ WAK G+YSN +GYLGGV++ ++VA CQ+YP
Sbjct: 195 ------------VPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYP 242
Query: 271 NAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYP 330
NA STL+ +FF + + W WP + L +P + LG VW+ R N +H MPIITPAYP
Sbjct: 243 NAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARAN---SWHCMPIITPAYP 299
Query: 331 QQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGK---TMWDKLFETPNFFTKYRHYLVLI 387
NS+ NVS T +M EF +G + I K + + KLFE +FF +Y HYL +
Sbjct: 300 VMNSSANVSRFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVD 359
Query: 388 ASSVSAEDQLEWCGLIESKVRHL 410
+ S ++ W G +ES++R +
Sbjct: 360 MMASSEDEHRAWVGWVESRLRKV 382
>gi|354681993|ref|NP_001238936.1| poly(A) polymerase alpha isoform 3 [Homo sapiens]
gi|28071108|emb|CAD61935.1| unnamed protein product [Homo sapiens]
gi|119602054|gb|EAW81648.1| poly(A) polymerase alpha, isoform CRA_e [Homo sapiens]
Length = 238
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/197 (65%), Positives = 162/197 (82%), Gaps = 1/197 (0%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DLRDD
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 LLKNLDQKCVRSLNGCR 214
LLKNLD +C+RSLNG R
Sbjct: 189 LLKNLDIRCIRSLNGMR 205
>gi|342182011|emb|CCC91490.1| putative poly(A) polymerase [Trypanosoma congolense IL3000]
Length = 677
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/499 (31%), Positives = 247/499 (49%), Gaps = 60/499 (12%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAK-NIPPTVAEKVGGKIYTFGSYRLGVHHKG 120
E +EE + R VL +N +V+ WI+ I + +P A +V G+I+ GSYR VH G
Sbjct: 39 EPEEEANRRRSVLEHINCIVRAWIRSTMITEFRMPAEAAAQVEGRIFATGSYRYNVHGSG 98
Query: 121 ADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA 180
+DID + +AP + R +F++ +L +T L + +A VP+I M DGI+ID+ F
Sbjct: 99 SDIDIVLIAPNRITREHFFNTLAPRLSHEPRITKLHCIRDARVPLIAMVADGIDIDLSFG 158
Query: 181 RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA 240
+ +P+ + D LL+ LD + V S N RV I+ LVP+ +FR ALR IK W
Sbjct: 159 SIRQDRVPEVIT---DDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWG 215
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPD 300
K GIYSN G+ G+ WA+LVA +CQ +PN A+ +V +FF ++ W P P K +
Sbjct: 216 KARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRFFRIYHAWFSPNPQGSGKEN 275
Query: 301 NV-----------NLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEE 349
NLG WDPR + +D L P++TPA P N+ FNV+++ + E
Sbjct: 276 RAIYLTETMRVKTNLGR-CWDPRESKSDALALFPVLTPAVPYGNACFNVTMTNLRQLCAE 334
Query: 350 FKQGKTI-----------SEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE 398
F +G I +++ + +W K+ E FF +Y++Y+ + + AE
Sbjct: 335 FSRGHNICSSCIGMNVNETKEKFGPHGLWSKILEPVKFFGEYKYYMHVQVTCSDAELYQG 394
Query: 399 WCGLIESKVRHLIG--------NLERNPHINLAHVNPECYTDTTGVIA---------NGS 441
+ +ESK+R L ++E PHI L H+NP Y + A G+
Sbjct: 395 YVEAVESKIRFLWAGTAESRAQSIESFPHIQL-HLNPRRYEAPEEIEARARLLKKTPRGT 453
Query: 442 GSPEITAEGKEEG---------GENTSPPVSGVASMWFIGL--DFIAANVILNLTYDIQH 490
G P+ T + G +T+ P +S ++ G+ D A + ++L I+
Sbjct: 454 GVPDTTTTAENTGPTSSLPAAINRSTTAPAVSFSSHYYFGMSVDTKALSGKIDLAPSIRA 513
Query: 491 FTNAVHWQATQSKMMKDGM 509
F N V Q + K+G+
Sbjct: 514 FHNIVR----QLRQYKEGI 528
>gi|348667211|gb|EGZ07037.1| hypothetical protein PHYSODRAFT_307061 [Phytophthora sojae]
Length = 1061
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 188/289 (65%)
Query: 70 RMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVA 129
+++VL +L++L+ +W+K V + + G ++ GSYRLG+ +DIDA+CVA
Sbjct: 489 KLQVLKQLSDLLTKWVKMVGRERELSEEHIALTKGSLFLAGSYRLGLDDPNSDIDAVCVA 548
Query: 130 PRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPD 189
P HV D+FSSF L+ V+ L V A+VP+I ++F G+ +D+LFARL + +
Sbjct: 549 PWHVTHDDFFSSFCHLLEQTPGVSHLAPVPNAYVPLISLSFLGVRMDLLFARLPVSSVEP 608
Query: 190 DMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNV 249
+ ++ D +L + + +++LN RV+ +L LVP +R+ LR ++ WA++ GIYS
Sbjct: 609 NQNIDSDHMLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIVLRAVRAWARRRGIYSAK 668
Query: 250 LGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVW 309
LGYLGG+SWA+LVA +CQLYPNA + + +FF V S+W+WPQPV+L + LGF +W
Sbjct: 669 LGYLGGISWAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQPVMLNMIYDAGLGFDMW 728
Query: 310 DPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISE 358
DPR +V DR H+MPIITPAYP NS+ VS T +++ EE + + ++E
Sbjct: 729 DPRQSVFDRSHIMPIITPAYPHMNSSVQVSQPTFSVIYEELWRARYLAE 777
>gi|428168713|gb|EKX37654.1| hypothetical protein GUITHDRAFT_41551, partial [Guillardia theta
CCMP2712]
Length = 336
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 199/355 (56%), Gaps = 25/355 (7%)
Query: 124 DALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
DA+ + R++DR+D F + ++ +++ DL V+EA PVIK D E + ARL
Sbjct: 1 DAVMIVTRYIDRSDMFDDLYVAMQAREDIKDLIKVQEARAPVIKFRMDDFEFKLSMARLN 60
Query: 184 LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
+P+D D+ DD LKN+D + V SLN RVTD I LVPN+ +F+ ++ +K WAKK
Sbjct: 61 YATLPEDFDVTDDKHLKNVDPESVASLNSVRVTDTIRSLVPNLISFKYCIQALKFWAKKR 120
Query: 244 GIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKK--PDN 301
G+Y+N LG+LG +S ++ ARICQLYP A S L+ FF + QWKWPQPV L + ++
Sbjct: 121 GVYNNGLGFLGSISLEIMAARICQLYPKALPSRLLYFFFFTYCQWKWPQPVELAEIVANS 180
Query: 302 VNLGFPVWD-PRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDI 360
+L PVW ++DR HLMPII+P YP QN+ VS ST IM+E F + + + I
Sbjct: 181 HDLNLPVWGYGATEMSDRRHLMPIISPCYPAQNTAALVSRSTLKIMKEMFIRAMGVCKQI 240
Query: 361 YNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHI 420
+ GK W LFE + F+ Y ++L + AS+ S D W G + + ++I LER
Sbjct: 241 HEGKAGWCDLFEPVDLFSTYANFLQIQASARSKADHNMWKGFCAANIHNMISYLER---- 296
Query: 421 NLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDF 475
P+ Y D I P +G+++ E+ +W++GL F
Sbjct: 297 -----CPDAYLDRAHPIQRSYAKPR---KGEQDQYEH----------LWYVGLKF 333
>gi|428177975|gb|EKX46852.1| hypothetical protein GUITHDRAFT_94125 [Guillardia theta CCMP2712]
Length = 613
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 235/426 (55%), Gaps = 26/426 (6%)
Query: 35 LNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNI 94
L+ P+ D++ +L E LK E E R + L + ++K W E+ KNI
Sbjct: 33 LSFDGPSVADMKLNDKLMETLKQLGAYEDKECNQRREQALENIEKIMKTWTCEICKTKNI 92
Query: 95 PPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTD 154
++ ++ FGSY LGVH +DID LC+ P V+R+++FS KL V+ +T
Sbjct: 93 --SLDFDCSCRVVPFGSYCLGVHSHDSDIDLLCIIPEVVNRSEFFSRVPAKLAEVEGITC 150
Query: 155 LRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLR-DDMLLKNLDQKCVRSLNGC 213
++++ +AFVPVIK + G +ID+ R+ IP D+++ D LL+ D K + LNG
Sbjct: 151 IKSLADAFVPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIEDTKDITCLNGP 210
Query: 214 RVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA 273
RVT E+L+ VPNIENF++ LR IKLWA++ IYSN++G+ GGV+W ++ A++ QLYP
Sbjct: 211 RVTYELLQRVPNIENFKVLLRAIKLWARRREIYSNIIGFPGGVAWGIMAAQVAQLYPKMC 270
Query: 274 ASTLVCKFFLVFSQWKWPQPVLLKKPDNVN-------LGFPVWDPRVNVADRYHL----M 322
S L+ KFF ++ WK+ +++ P+ WDP R+H +
Sbjct: 271 PSLLLEKFFFLYKHWKFEDAIIVAPPEECQAPDGQERYNLHSWDP-----TRHHFSRRPL 325
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRH 382
+ITP YP NSTFN++ S +++ E + ++++ + G++ ++ LFE FF +Y
Sbjct: 326 TVITPTYPMANSTFNITDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAMFFKQYGT 385
Query: 383 YLVLIASSVSAEDQLE-WCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIAN-- 439
++ + + +E +E + G +ES++R L+ L + + L V+P C + A
Sbjct: 386 FVQI--EVLGSEKHIEAFSGYVESQIRKLVEKLTTS-QLGLYIVHP-CTRHFGPIPAEHL 441
Query: 440 GSGSPE 445
G G PE
Sbjct: 442 GGGDPE 447
>gi|325191928|emb|CCA26398.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 664
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 221/434 (50%), Gaps = 21/434 (4%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
SQ P + + L L P + D+Q T L +LS R + +L +V
Sbjct: 148 SQPPYLHPVVQPLYLGPTSDFDVQNTHSLLRYFHSIAKLPRSSDLSHRHLAIEELQRVVD 207
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
W+ + P K+ ++ GS+ L +D+D + AP V + +
Sbjct: 208 LWL-----VQKFPEYPDSKIA--LFLGGSWHLKAGFSDSDLDIVAFAPNFVTLDCFLTDL 260
Query: 143 FEKLKTV--DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLK 200
+ L + ++T L A+++A VP++ +G+ ID L AR ++P + + D +L
Sbjct: 261 YVYLSNLPNSKITKLVAMKKATVPILAFKLNGVHIDFLLARSTELKVPTHLPICCDEILS 320
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
+D +RS++ RV+ +L LVP FR +R I+LWAK+ GIYSN G+LGG+SW +
Sbjct: 321 GMDSISIRSMSIARVSSLVLELVPKGCAFRSFVRIIRLWAKRRGIYSNKTGFLGGISWTL 380
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKP--DNVNLGFPVWDPRVNVADR 318
L ICQ+ P A+ S L+ +FFLVFS+W WP PV + +P N W P+ N DR
Sbjct: 381 LAVFICQMLPEASLSVLLHRFFLVFSKWTWPTPVWIARPYLGNAEADGVQWCPQTNHHDR 440
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM--WDKLFETPNF 376
HLMPIITP YP NS NV+ +T IMQEEF++G+ I E+I W LF F
Sbjct: 441 AHLMPIITPGYPSVNSAVNVNRATLRIMQEEFQRGRYIVEEITEKYAFGNWQNLFTPSEF 500
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV 436
+Y +YLV+ +++ ED +W I S++R L+ +LE I H P V
Sbjct: 501 LVRYDNYLVMRVQALNEEDLDQWSNYIASRLRKLVESLEVAIPIRSVHPYP--------V 552
Query: 437 IANGSGSPEITAEG 450
+ G+ P + A G
Sbjct: 553 LMPGTQDPGVNASG 566
>gi|301095250|ref|XP_002896726.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
gi|262108787|gb|EEY66839.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
Length = 343
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 199/342 (58%), Gaps = 34/342 (9%)
Query: 195 DDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLG 254
DD +L+ +D+ VRS NG RVT+ IL+LVPN E FR L +K WA+ GIYSNVLG+LG
Sbjct: 3 DDQVLRGMDEASVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARIRGIYSNVLGFLG 62
Query: 255 GVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN-VNLGFPVWDPRV 313
GV+WA+LVARICQ YPN+ ++L+ +FF ++ W WP P++L + DN +NLGF W+P++
Sbjct: 63 GVNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKI 122
Query: 314 NVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFET 373
NV DR HLMPIITPAYP NS++NV ST +++ EF +G + +I K W KLF
Sbjct: 123 NVRDRSHLMPIITPAYPALNSSYNVMASTLCVLKTEFDRGLDRTLEIETKKFSWAKLFVA 182
Query: 374 PNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDT 433
P FF + +H+L + ++ SA+D W G +ES++RHL LE L+ + +
Sbjct: 183 PAFFQRSKHFLRVEITARSAQDFDGWFGWVESRLRHLFLRLE-----ALSDIRIHPFARF 237
Query: 434 TGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMW-FIGLDFIA--------ANVILNL 484
I PE +++ + V + W FIGL F A A ++L
Sbjct: 238 FDFIDTKDTRPESSSKCE-------------VHTSWLFIGLKFPAPKAAPVTGATHSVDL 284
Query: 485 TYDIQHF-TNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYL 525
T I+ F T W+ GM +++ HV + Q+ E++
Sbjct: 285 TSVIRDFATYTDQWEGRHG-----GMDMQIDHVTRSQIPEWV 321
>gi|428177976|gb|EKX46853.1| hypothetical protein GUITHDRAFT_162826 [Guillardia theta CCMP2712]
Length = 572
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 167/554 (30%), Positives = 280/554 (50%), Gaps = 50/554 (9%)
Query: 35 LNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNI 94
L+ P+ D+Q +L E LK E E R + L + ++K W E+ KNI
Sbjct: 33 LSFDGPSVADMQLNDKLMETLKQLGAYEDKECNKRREQALENIEKIMKTWTCEICKTKNI 92
Query: 95 PPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTD 154
++ ++ FGSY LGVH +DID LC+ P V+R+++FS KL V+ +T
Sbjct: 93 --SLDFDCSCRVAPFGSYCLGVHSHDSDIDLLCIIPEVVNRSEFFSRVPAKLAEVEGITC 150
Query: 155 LRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLR-DDMLLKNLDQKCVRSLNGC 213
++++ +AF PVIK + G +ID+ R+ IP D+++ D LL+ D K + LNG
Sbjct: 151 IKSLADAFAPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIEDTKDITCLNGP 210
Query: 214 RVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA 273
RVT E+L+ VPNIENF++ LR IKLWA++ IYS ++G+ GGV+W ++ A++ QLYP
Sbjct: 211 RVTYELLQRVPNIENFKVLLRAIKLWARRREIYSKIIGFPGGVAWGIMAAQVAQLYPKMC 270
Query: 274 ASTLVCKFFLVFSQWKWPQPVLLKKPDNVN-------LGFPVWDPRVNVADRYHLMPIIT 326
S L+ KFF ++ WK+ +++ P+ WDP R L +IT
Sbjct: 271 PSLLLEKFFHLYKHWKFEDAIIVAPPEECQAPDGQERYNLHAWDPTRRHFSRRPLT-VIT 329
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVL 386
P YP NSTFNV+ S +++ E + ++++ + G++ ++ LFE FF +Y ++ +
Sbjct: 330 PTYPMDNSTFNVTDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAMFFKQYGTFVQI 389
Query: 387 IASSVSAEDQLE-WCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPE 445
+ +E +E + G +ES++R L+ L + + L V+P C + A G
Sbjct: 390 --EVLGSEKHIEAFSGYVESQIRKLVEKLTTS-QLGLYIVHP-CTRHFGPIPAEHLG--- 442
Query: 446 ITAEGKEEGGENTSPPVSGVASMWFIGLDF--------IAANVILNLTYDIQHFTNAVHW 497
GG+ P + +++GL F A+ ++ T ++ F +H
Sbjct: 443 --------GGDPEDGPWQNI--FFYLGLKFDDNLVRHMKASGQSVDFTQPVKEFLLGIHI 492
Query: 498 -QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK--KTKSGDQN---TSAKKRKSD 551
TQ+ I ++ VK++ L E++ + K + D++ SAKKR
Sbjct: 493 TDPTQT-------SISIKVVKRRALPEWVKKEYYSQSKFEGMRLEDEHGELESAKKRALG 545
Query: 552 QALDELGDKSRPRL 565
+A + S R+
Sbjct: 546 EASESADATSNGRV 559
>gi|72391414|ref|XP_846001.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175902|gb|AAX70026.1| poly(A) polymerase, putative [Trypanosoma brucei]
gi|70802537|gb|AAZ12442.1| poly(A) polymerase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 687
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 163/505 (32%), Positives = 251/505 (49%), Gaps = 67/505 (13%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAK-NIPPTVAEKVGGKIYTFGSYRLGVHHKG 120
E +EE + R VL +N +V+ WI+ IA+ +P A +V G+I+ GSYR VH G
Sbjct: 39 EPEEEANRRRSVLEHINCIVRAWIRSTMIAEFRMPAEAAAQVEGRIFATGSYRYNVHGSG 98
Query: 121 ADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA 180
+DID + +AP + R +F++ +L +T+L + +A VP+I M DGI+ID+ F
Sbjct: 99 SDIDIVLIAPNRITREHFFNTLAPRLSHESRITELHCIRDARVPLIAMVADGIDIDLSFG 158
Query: 181 RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA 240
+ +P+ + D LL+ LD + V S N RV I+ LVP+ +FR ALR IK W
Sbjct: 159 SIRQDRVPEVIT---DDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWG 215
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQP------- 293
K GIYSN G+ G+ WA+LVA +CQ +PN A+ +V +FF ++ W P P
Sbjct: 216 KARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGREN 275
Query: 294 --VLLKKPDNV--NLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEE 349
+ L + V NLG WDPR + +D L P++TPA P N+ +NV+++ + +E
Sbjct: 276 RAIYLTETMRVKTNLGRG-WDPRESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDE 334
Query: 350 FKQGKTISEDIYNG------------KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQL 397
F +G I Y G +W K+ E FF +Y++YL + + AE
Sbjct: 335 FARGHEICSS-YIGMGVEETKMKLGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQ 393
Query: 398 EWCGLIESKVRHLIG--------NLERNPHINLAHVNPECYTDTTGVIA---------NG 440
+ +ESK+R L +LE PH+ L +NP+ Y V A G
Sbjct: 394 GYVDAVESKIRFLWAGTAESRAQSLESFPHVRL-RLNPKGYEAPEEVEARSRLLKKAPRG 452
Query: 441 SGSPEITAEGK--------------EEGGENTSPPVSGVASMWFIGL--DFIAANVILNL 484
G PE A+G+ GG + V + ++ G+ D AA++ ++L
Sbjct: 453 GGIPESGAQGRAGASSNGNSSSVSSAVGGGSAGTAVKSFSRHYYFGMSVDSKAASMKVDL 512
Query: 485 TYDIQHFTNAVHWQATQSKMMKDGM 509
I+ F N V Q + +DG+
Sbjct: 513 APSIRSFHNIVR----QLRQYRDGV 533
>gi|261329513|emb|CBH12495.1| poly(A) polymerase, putative [Trypanosoma brucei gambiense DAL972]
Length = 687
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 162/505 (32%), Positives = 250/505 (49%), Gaps = 67/505 (13%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAK-NIPPTVAEKVGGKIYTFGSYRLGVHHKG 120
E +EE + R VL +N +V+ WI+ IA+ +P A +V G+I+ GSYR VH G
Sbjct: 39 EPEEEANRRRSVLEHINCIVRAWIRSTMIAEFRMPAEAAAQVEGRIFATGSYRYNVHGSG 98
Query: 121 ADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA 180
+DID + +AP + R +F++ +L +T+L + +A VP+I M DGI+ID+ F
Sbjct: 99 SDIDIVLIAPNRITREHFFNTLAPRLSHESRITELHCIRDARVPLIAMVADGIDIDLSFG 158
Query: 181 RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA 240
+ +P+ + D LL+ LD + V S N RV I+ L P+ +FR ALR IK W
Sbjct: 159 SIRQDRVPEVIT---DDLLQGLDDQSVLSCNAVRVAHNIMDLAPHKASFRQALRFIKAWG 215
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQP------- 293
K GIYSN G+ G+ WA+LVA +CQ +PN A+ +V +FF ++ W P P
Sbjct: 216 KARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGREN 275
Query: 294 --VLLKKPDNV--NLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEE 349
+ L + V NLG WDPR + +D L P++TPA P N+ +NV+++ + +E
Sbjct: 276 RAIYLTETMRVKTNLGRG-WDPRESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDE 334
Query: 350 FKQGKTISEDIYNG------------KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQL 397
F +G I Y G +W K+ E FF +Y++YL + + AE
Sbjct: 335 FARGHEICSS-YIGMGVEETKMKLGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQ 393
Query: 398 EWCGLIESKVRHLIG--------NLERNPHINLAHVNPECYTDTTGVIA---------NG 440
+ +ESK+R L +LE PH+ L +NP+ Y V A G
Sbjct: 394 GYVDAVESKIRFLWAGTAESRAQSLESFPHVRL-RLNPKGYEAPEEVEARSRLLKKAPRG 452
Query: 441 SGSPEITAEGK--------------EEGGENTSPPVSGVASMWFIGL--DFIAANVILNL 484
G PE A+G+ GG + V + ++ G+ D AA++ ++L
Sbjct: 453 GGIPEGGAQGRAGASSNGNSSSVSSAVGGGSAGTAVKSFSRHYYFGMSVDSKAASMKVDL 512
Query: 485 TYDIQHFTNAVHWQATQSKMMKDGM 509
I+ F N V Q + +DG+
Sbjct: 513 APSIRSFHNIVR----QLRQYRDGV 533
>gi|325184553|emb|CCA19046.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 799
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 215/399 (53%), Gaps = 28/399 (7%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGA 121
ET+E ++ +L +++ + WIK + + G ++ GSYRLG+H +
Sbjct: 284 ETEETKPMKVRMLKSISDALNRWIKVLGYEVGLTQEQIAITQGALFLAGSYRLGLHDPDS 343
Query: 122 DIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAR 181
DID +C P HV D+F F L + +VT+L V A VP+I +++ I++D+LFA+
Sbjct: 344 DIDVVCAVPYHVSHRDFFCGFSAVLTRMTQVTELVTVPNASVPLISLSYQSIKLDLLFAQ 403
Query: 182 LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAK 241
L L I D+D+ D +L + V+SLN RV+ IL LVPN + FR R I+ WA+
Sbjct: 404 LPLLSIGADLDIHSDHILAGVSAASVKSLNAPRVSSMILSLVPNRQVFRRVSRAIRAWAR 463
Query: 242 KHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN 301
+ GIYS+ LGYL G++WA+L A +CQL+P S + FF V S+W+WP+P++L P +
Sbjct: 464 RRGIYSSKLGYLSGINWALLTAFVCQLFPGRTVSYVFVHFFYVLSEWQWPKPIMLNIPYD 523
Query: 302 VNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISE-DI 360
LG W + DR H+MPIITPAYPQ NS+ V+ ST ++++EE + + + E +I
Sbjct: 524 AKLGLECWS--FQLRDRTHVMPIITPAYPQMNSSAQVTASTLSVIKEELWRARDLLEREI 581
Query: 361 YNGKTM------------------------WDKLFETPNFFTKYRHYLVLIASSVSAEDQ 396
+ T WD L++ +FF +Y Y+ L + + +
Sbjct: 582 LSSITSHQQDQRTRKEAGALEKPDTDTFLSWDVLYQPSSFFVRYDWYVGLTI-QIDSSEL 640
Query: 397 LEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTG 435
W + S++ L+ L+ P I+L H P+ + G
Sbjct: 641 GRWETFVCSRLHKLVKMLQDLPMIDLVHGYPQFLVNKAG 679
>gi|407396778|gb|EKF27540.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 645
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 212/399 (53%), Gaps = 34/399 (8%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAK-NIPPTVAEKVGGKIYTFGSYRLGVHHKG 120
E +EE + R VL +NN+V+ WI+ I + +P A +V G+I+ GSYR VH G
Sbjct: 39 EPEEEANRRRSVLEHINNIVRAWIRSTMITEFRMPAEAATQVEGRIFATGSYRYNVHASG 98
Query: 121 ADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA 180
+DID + +AP + R +F++ +L+ +T+L + +A VP+I M DGI+ID+ F
Sbjct: 99 SDIDIVLIAPNRITREHFFNTLAPRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSFG 158
Query: 181 RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA 240
+ +P+ + D LL+ LD + V S N RV I+ LVP+ +FR ALR IK W
Sbjct: 159 SIRQDRVPEVIT---DDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWG 215
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQP------- 293
K GIYSN G+ G+ WA+LVA +CQ +PN A+ +V +FF ++ W P P
Sbjct: 216 KARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGREN 275
Query: 294 --VLLKKPDNV--NLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEE 349
+ L + V NLG WDPR + +D L P++TPA P N+ FNV+++ + E
Sbjct: 276 RAIYLTETMRVKTNLGRG-WDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCAE 334
Query: 350 FKQGKTI-----------SEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE 398
F +G I ++ + +W +L E FF Y++YL ++ S AE
Sbjct: 335 FARGHEICSSSLVASAEEAKSRFGPHGIWSRLLEPVKFFGNYKYYLHVLVSCTDAEAYQG 394
Query: 399 WCGLIESKVRHL-IGNLERNPHI--NLAHV----NPECY 430
+ +ESK+R L G E + N+ HV NP Y
Sbjct: 395 YVDAVESKIRFLWAGTAESRGYALENVRHVRIQLNPRRY 433
>gi|301100486|ref|XP_002899333.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262104250|gb|EEY62302.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 990
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 193/302 (63%), Gaps = 2/302 (0%)
Query: 59 NVSETD--EELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGV 116
+S TD E +++VL +L++L+ +W+K V + + G ++ GSYRLG+
Sbjct: 433 GISPTDAPEARMHKLQVLKQLSDLLTKWVKRVGRERELSEEHITLTKGSLFLAGSYRLGL 492
Query: 117 HHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEID 176
+DIDA+CVAP HV D+F SF + L V+ L V A+VP+I ++F G+ +D
Sbjct: 493 DDPNSDIDAVCVAPWHVTHDDFFGSFCQLLAQTPGVSHLAPVRSAYVPLISLSFLGVRMD 552
Query: 177 MLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTI 236
+LF+RL + + + ++ D +L + + +++LN RV+ +L LVP +R+ LR +
Sbjct: 553 LLFSRLPMSSVESNQNIDSDHMLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIVLRAV 612
Query: 237 KLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLL 296
+ WA++ GIYS LGYLGG+SWA+LVA +CQLYPNA + + +FF V S+W+WPQPV+L
Sbjct: 613 RAWARRRGIYSAKLGYLGGISWAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQPVML 672
Query: 297 KKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTI 356
+ LGF +WDPR +V DR H+MPIITPAYP NS+ VS S+ +++ EE + + +
Sbjct: 673 NMIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPHMNSSVQVSQSSFSVIYEELWRARYL 732
Query: 357 SE 358
+E
Sbjct: 733 AE 734
>gi|407832565|gb|EKF98495.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 645
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 213/399 (53%), Gaps = 34/399 (8%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAK-NIPPTVAEKVGGKIYTFGSYRLGVHHKG 120
E +EE + R VL +NN+V+ WI+ I + +P A +V G+I+ GSYR VH G
Sbjct: 39 EPEEEANRRRSVLEHINNIVRAWIRSTMITEFRMPAEAATQVEGRIFATGSYRYNVHASG 98
Query: 121 ADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA 180
+DID + +AP + R +F++ +L+ +T+L + +A VP+I M DGI+ID+ F
Sbjct: 99 SDIDIVLIAPNRITREHFFNTLAPRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSFG 158
Query: 181 RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA 240
+ +P+ + D LL+ LD + V S N RV I+ LVP+ +FR ALR IK W
Sbjct: 159 SIRQDRVPEVIT---DDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWG 215
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQP------- 293
K GIYSN G+ G+ WA+LVA +CQ +PN A+ +V +FF ++ W P P
Sbjct: 216 KARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGREN 275
Query: 294 --VLLKKPDNV--NLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEE 349
+ L + V NLG WDPR + +D L P++TPA P N+ FNV+++ + E
Sbjct: 276 RAIYLTETMRVKTNLGRG-WDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTE 334
Query: 350 FKQGKTI-----------SEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE 398
F +G I ++ + +W +L E FF ++++YL ++ S AE
Sbjct: 335 FARGHEICSSSLVTSAEEAKSRFGPHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQG 394
Query: 399 WCGLIESKVRHL-IGNLERNPHI--NLAHV----NPECY 430
+ +ESK+R L G E + N+ HV NP Y
Sbjct: 395 YVDAVESKIRFLWAGTAESRGYALENIRHVRIRLNPRRY 433
>gi|71419820|ref|XP_811284.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70875931|gb|EAN89433.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 645
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 213/399 (53%), Gaps = 34/399 (8%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAK-NIPPTVAEKVGGKIYTFGSYRLGVHHKG 120
E +EE + R VL +NN+V+ WI+ I + +P A +V G+I+ GSYR VH G
Sbjct: 39 EPEEEANRRRSVLEHINNIVRAWIRSTMITEFRMPAEAATQVEGRIFATGSYRYNVHASG 98
Query: 121 ADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA 180
+DID + +AP + R +F++ +L+ +T+L + +A VP+I M DGI+ID+ F
Sbjct: 99 SDIDIVLIAPNRITREHFFNTLAPRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSFG 158
Query: 181 RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA 240
+ +P+ + D LL+ LD + V S N RV I+ LVP+ +FR ALR IK W
Sbjct: 159 SIRQDRVPEVIT---DDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWG 215
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQP------- 293
K GIYSN G+ G+ WA+LVA +CQ +PN A+ +V +FF ++ W P P
Sbjct: 216 KARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGREN 275
Query: 294 --VLLKKPDNV--NLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEE 349
+ L + V NLG WDPR + +D L P++TPA P N+ FNV+++ + E
Sbjct: 276 RAIYLTETMRVKTNLGRG-WDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTE 334
Query: 350 FKQGKTI-----------SEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE 398
F +G I ++ + +W +L E FF ++++YL ++ S AE
Sbjct: 335 FARGHEICSSSLVTSAEEAKSRFGPHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQG 394
Query: 399 WCGLIESKVRHL-IGNLERNPHI--NLAHV----NPECY 430
+ +ES++R L G E + N+ HV NP Y
Sbjct: 395 YVDAVESRIRFLWAGTAESRGYALENIRHVRIRLNPRRY 433
>gi|294895248|ref|XP_002775109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881038|gb|EER06925.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 413
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/279 (42%), Positives = 173/279 (62%), Gaps = 6/279 (2%)
Query: 40 PNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVA 99
P DL++ + E L + E+ R + L L ++ +W+ EV + + + A
Sbjct: 27 PTVADLKQNEGMLEFLTTAAPEASKEDREKREKALRVLEGVIGDWLTEVGVQQGMTAENA 86
Query: 100 EKVG--GKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRA 157
K GK++TFGS+RLG+ +DID LCVAPRHV R +F S KL+ +DEV +
Sbjct: 87 RKQSNNGKLFTFGSHRLGLISPSSDIDCLCVAPRHVTREAFFGSLVGKLQQMDEVETVTP 146
Query: 158 VEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTD 217
V +A+ P+IK+ G++ID+LFARL L DL+ D LLKNLD + VR +NG RV D
Sbjct: 147 VPDAYAPIIKLVCCGVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSVRCVNGTRVAD 206
Query: 218 EILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTL 277
IL+LVP FR LR IKLWAK+ G+Y+N++G+ GG++WA+LVAR+CQ++PN + L
Sbjct: 207 LILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQMFPNMQSVQL 266
Query: 278 VCKFFLVFSQWKWPQPVLL---KKPDNVNL-GFPVWDPR 312
V +FFL+ S+W W PV L ++ + L F VW+P+
Sbjct: 267 VRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPK 305
>gi|116207486|ref|XP_001229552.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
gi|88183633|gb|EAQ91101.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
Length = 592
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 185/298 (62%), Gaps = 15/298 (5%)
Query: 27 VTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIK 86
+ YG+T ++ + P + + + L + L+ E+ +E R EVL +L + +++
Sbjct: 4 IIYGVTPPISTTLPTEPEKRLNHALHQELRAQGTFESPQETEKRKEVLRQLEKITTVFVQ 63
Query: 87 EVSIAKNIPPT-VAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFE- 144
+ K T + G+++T+GSYRLGV+ G+D+D L VAP++V YF F E
Sbjct: 64 RAAAQKEPKNTFMIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQYFEIFPEV 123
Query: 145 --KLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARL-ALKEIPDDMD--LRDDMLL 199
++ +TDL V EAFVP+IK F GI ID++F + LK++PD+ + L D+ LL
Sbjct: 124 LVEMAPPGAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPDEKNWSLADNNLL 183
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+ L + VRSLNG RVTD+IL LVP F+LALR IKLWA++ IY+N++GY GGV+WA
Sbjct: 184 RGLSENEVRSLNGTRVTDDILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWA 243
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLG-----FPVWDPR 312
MLVAR+CQLYP A ++ +V KFF + +W WP PVLLK ++ G PVW+P+
Sbjct: 244 MLVARVCQLYPKATSAVVVNKFFHIMFKWPWPLPVLLK---DIEYGSPVTRVPVWNPK 298
>gi|154334339|ref|XP_001563421.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060437|emb|CAM37605.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 709
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 212/402 (52%), Gaps = 36/402 (8%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAK-NIPPTVAEKVGGKIYTFGSYRLGVHHKG 120
E +EE + R VL ++ N+V+ WI+ IA+ +P A +V G+I+ GSYR VH G
Sbjct: 42 EPEEESNRRRSVLERIVNVVRVWIRHTMIAEFRMPEAAAAQVEGRIFATGSYRYNVHTSG 101
Query: 121 ADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA 180
+DID + +AP + R +F++ +LK VT+L + E+ VP+I M DGI+ID+ F
Sbjct: 102 SDIDMVLIAPSRITREHFFNTLAPRLKGEPWVTELHCIRESRVPIIAMVCDGIDIDLSFG 161
Query: 181 RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA 240
+ +P+ + D LL+ LD++ V S N RV I+ LVPN FR ALR +K W
Sbjct: 162 SIRQDRVPEVIT---DDLLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQALRFVKAWG 218
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQP------- 293
K IYSN G+ G+ WA+L A +CQ YPN A+ ++ +FF + W P P
Sbjct: 219 KARSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMITRFFRTYHTWFKPNPHETGTEN 278
Query: 294 --VLLKKP--DNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEE 349
+ L + +LG WDPR + +D L P++TPA P N+ +NV+++ + +E
Sbjct: 279 RAIYLTESMRARTHLGRG-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDE 337
Query: 350 FKQGKTI-----------SEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE 398
F++G + +E + +W ++ E FF K+RHYL + S AE
Sbjct: 338 FQRGHDLLSNDLGMSAVEAEAKFGPFGVWSRVLEPAPFFGKFRHYLHIKVSCSDAEHYQA 397
Query: 399 WCGLIESKVRHL-IGNLERNPH-------INLAHVNPECYTD 432
+ +ES++R L GN H + L H+NP + D
Sbjct: 398 YADGVESRIRILWAGNASSRGHTLEDYRQLRL-HLNPRRFED 438
>gi|308472139|ref|XP_003098298.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
gi|308269146|gb|EFP13099.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
Length = 343
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 210/399 (52%), Gaps = 74/399 (18%)
Query: 168 MNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIE 227
M + GIE+D+LFARL IP+++DL DD LL NLD+ +RSLNG RV +++L+LVPN +
Sbjct: 1 MTYSGIELDVLFARLDKPTIPENIDLSDDSLLVNLDESSIRSLNGIRVAEQLLKLVPNRD 60
Query: 228 NFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQ 287
F +LR IKLWAK HG+YSN +G+ GG++WA+LVA+ CQLYPNAA S ++ K F VFS
Sbjct: 61 TFCQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVAKTCQLYPNAAPSKIIQKVFFVFST 120
Query: 288 WKWPQPVLLKKPDNVNLGFPVWDPRV-NVADRYHLMPIITPAYPQQNSTFNVSISTRTIM 346
WKWP PV+LK+ F D ++ N+ H I+
Sbjct: 121 WKWPSPVVLKQ-------FGCVDSKLANLKSTLH------------------------II 149
Query: 347 QEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESK 406
QEE K I + I G W+ LFE NFF++Y+H++ L +++ + + G ESK
Sbjct: 150 QEEMKSALEICDQIQKGNATWNDLFEEINFFSRYKHFVAL---TINEDTNI---GFFESK 203
Query: 407 VRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVA 466
+R L+ +ERN + AH+NP +
Sbjct: 204 IRQLVQIIERNSQVKTAHINPRKLKNIRN------------------------------E 233
Query: 467 SMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLP 526
S WF+GL+F L+LT +I+ F + Q QSK + ++++ +VK+ L +++
Sbjct: 234 STWFLGLEFTENAKNLDLTSEIEGFKRNMARQ--QSKGIVGQIQLDATYVKRSDLIKFIS 291
Query: 527 AHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRL 565
LK+ + KS +A RK + + + +PR+
Sbjct: 292 LGDLKRGRFVKS----KTAANRKRPASSGDSTETKKPRV 326
>gi|146081651|ref|XP_001464305.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|398012599|ref|XP_003859493.1| poly(A) polymerase, putative [Leishmania donovani]
gi|134068396|emb|CAM66686.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|322497708|emb|CBZ32784.1| poly(A) polymerase, putative [Leishmania donovani]
Length = 709
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 225/435 (51%), Gaps = 42/435 (9%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAK-NIPPTVAEKVGGKIYTFGSYRLGVHHKG 120
E +EE + R VL ++ N+V+ WI+ I + +P A +V G+I+ GSYR VH G
Sbjct: 42 EPEEESNRRRSVLERIVNVVRVWIRHTMITEFRMPEAAAAQVEGRIFATGSYRYNVHTSG 101
Query: 121 ADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA 180
+DID + +AP + R +F++ +LK+ VTDL + E+ VP+I M DGI+ID+ F
Sbjct: 102 SDIDMVLIAPSRITREHFFNTLAPRLKSEPWVTDLHCIRESRVPIIAMVCDGIDIDLSFG 161
Query: 181 RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA 240
+ +P+ + D LL+ LD++ V S N RV I+ LVPN FR LR +K W
Sbjct: 162 SIRQDRVPEVIT---DDLLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWG 218
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQP------- 293
K IYSN G+ G+ WA+L A +CQ YPN A+ +V +FF + W P P
Sbjct: 219 KARSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMVTRFFRTYHTWFKPNPHETGTEN 278
Query: 294 --VLLKKP--DNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEE 349
+ L + +LG WDPR + +D L P++TPA P N+ +NV+++ + +E
Sbjct: 279 RAIYLTESMRARTHLGRG-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDE 337
Query: 350 FKQGK-TISEDI----------YNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE 398
F++G +S+D+ + +W ++ E FF K++HYL + S AE
Sbjct: 338 FQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQA 397
Query: 399 WCGLIESKVRHL-IGNLERNPH-------INLAHVNPECYTD------TTGVIANGSGSP 444
+ +ES++R L GN H + L H+NP + D T + + +G+
Sbjct: 398 YADGVESRIRILWAGNASSRGHTLEDYRQLRL-HLNPRRFEDPEEVQLRTRLTSKATGAA 456
Query: 445 EITAEGKEEGGENTS 459
++ + G TS
Sbjct: 457 AASSHTRGSVGSRTS 471
>gi|157866653|ref|XP_001687718.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
gi|68125332|emb|CAJ03188.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
Length = 700
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 213/402 (52%), Gaps = 36/402 (8%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAK-NIPPTVAEKVGGKIYTFGSYRLGVHHKG 120
E +EE + R VL ++ N+V+ WI+ I + +P A +V G+I+ GSYR VH G
Sbjct: 42 EPEEESNRRRSVLERIVNVVRVWIRHTMITEFRMPEAAAAQVEGRIFATGSYRYNVHTSG 101
Query: 121 ADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA 180
+DID + +AP + R +F++ +LK+ VTDL + E+ VP+I M DGI+ID+ F
Sbjct: 102 SDIDMVLIAPSRITREHFFNTLAPRLKSEPWVTDLHCIRESRVPIIAMVCDGIDIDLSFG 161
Query: 181 RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA 240
+ +P+ + D LL+ LD++ V S N RV I+ LVPN FR LR +K W
Sbjct: 162 SIRQDRVPEVIT---DDLLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWG 218
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQP------- 293
K IYSN G+ G+ WA+L A +CQ YPN A+ +V +FF + W P P
Sbjct: 219 KARSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMVTRFFRTYHTWFKPNPHETGTEN 278
Query: 294 --VLLKKP--DNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEE 349
+ L + +LG WDPR + +D L P++TPA P N+ +NV+++ + +E
Sbjct: 279 RAIYLTESMRARTHLGRG-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDE 337
Query: 350 FKQGK-TISEDI----------YNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE 398
F++G +S+D+ + +W ++ E FF K++HYL + S AE
Sbjct: 338 FQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQA 397
Query: 399 WCGLIESKVRHL-IGNLERNPH-------INLAHVNPECYTD 432
+ +ES++R L GN H + L H+NP + D
Sbjct: 398 YADGVESRIRILWAGNASSRGHTLEDYRQLRL-HLNPRRFED 438
>gi|405977001|gb|EKC41474.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 323
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 164/274 (59%), Gaps = 34/274 (12%)
Query: 290 WPQPVLLK---KPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIM 346
WPQPVLLK + NL FPVWDPRVN +D +HLMPIITP YP +N+TF V++S+R+IM
Sbjct: 3 WPQPVLLKSLVHENKHNLSFPVWDPRVNTSDMFHLMPIITPTYPHENTTFTVTLSSRSIM 62
Query: 347 QEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESK 406
EE K G I IY G+ W LFE NFF KY+HYLVL S+V +D LEW G ESK
Sbjct: 63 TEELKDGFEIVSKIYEGREEWGALFEPSNFFQKYKHYLVLTVSTVEEKDYLEWHGYAESK 122
Query: 407 VRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVA 466
+R LIGNLERNP I LAHV+P SP E E+
Sbjct: 123 LRLLIGNLERNPCIKLAHVHP---------------SP--LGPLNESDDEH--------L 157
Query: 467 SMWFIGLDF--IAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEY 524
WFIGL F I ++LT+DIQ FTN VH QA +MKDGMK++++HVK++QL Y
Sbjct: 158 CRWFIGLTFVKIENQNFVDLTFDIQSFTNTVHKQAYHINLMKDGMKVKIKHVKRRQLGLY 217
Query: 525 LPAHMLKKDKKTKSGDQNT----SAKKRKSDQAL 554
+P +L + K+ + + T SA K + +Q L
Sbjct: 218 VPPEILLQSKRVAAAQEPTSSIGSASKSECNQTL 251
>gi|349603143|gb|AEP99064.1| Poly(A) polymerase gamma-like protein, partial [Equus caballus]
Length = 435
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 120/223 (53%), Positives = 148/223 (66%), Gaps = 27/223 (12%)
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DRYHLMPIITPAYPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNF
Sbjct: 1 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 60
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGV 436
F KYRHY+VL AS+ + E+ EW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 61 FQKYRHYIVLTASASTEENHSEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG---- 116
Query: 437 IANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFT 492
KE +N SMWF+G+ F A +V ++LTYDIQ FT
Sbjct: 117 -------------NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFT 157
Query: 493 NAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
+ V+ QA M+K+GMKIE HVKKKQL YLPA +L+K KK
Sbjct: 158 DTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKK 200
>gi|357115984|ref|XP_003559765.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 554
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 216/384 (56%), Gaps = 20/384 (5%)
Query: 39 PPNQL---DLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIP 95
PP L D +R+ L + L+ T EE +R +V+ KL +V +W K V+ + +P
Sbjct: 81 PPAFLFEADFRRSHSLVQFLENEGAVPTVEEDKTREQVIRKLKEIVMDWAKVVAYEQRVP 140
Query: 96 PTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTVDEVTD 154
P +V + T+GSY LG H +DIDALCV P + +F + + L+ EV+
Sbjct: 141 P---RRVTATVLTYGSYTLGAHGPESDIDALCVGPCIATLQHHFFVALRQILERRLEVSG 197
Query: 155 LRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCR 214
++ VE A VP+++ F GI +D+ +A+L + + + ++ L+ LD + RSL+G R
Sbjct: 198 MQTVENAKVPLMRFTFSGISVDLTYAQLPVVDAVEAINTSSPQFLRRLDSRSWRSLSGVR 257
Query: 215 VTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAA 274
V ++I++LVPN + F++ LR+IKLWA++ G++ ++LG+ G+ A+L A ICQ YPNA A
Sbjct: 258 VNEQIVQLVPNAKKFQVLLRSIKLWARRRGLHCHLLGFFAGIHLAILAAYICQRYPNATA 317
Query: 275 STLVCKFFLVFSQWKWPQPV-LLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQN 333
+ L FF +F+ W W PV L +P N +D Y+ MPI+ P P +
Sbjct: 318 NGLFTMFFEIFAHWDWQIPVNLHGQPTNCKR-----------SDGYY-MPIVMPCTPPEL 365
Query: 334 STFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSA 393
N++ T ++EE +G +++D++ W LF + T+Y+ +L + S ++
Sbjct: 366 CMSNMTKCTFKKIREELMRGYALTKDLWRHDFEWTWLFAPFPYATRYQQFLRIALCSPTS 425
Query: 394 EDQLEWCGLIESKVRHLIGNLERN 417
E+ +W G ++S+ R LI LERN
Sbjct: 426 EELRDWTGWVKSRFRQLILKLERN 449
>gi|340054738|emb|CCC49040.1| putative poly(A) polymerase [Trypanosoma vivax Y486]
Length = 671
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 163/552 (29%), Positives = 256/552 (46%), Gaps = 62/552 (11%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAK-NIPPTVAEKVGGKIYTFGSYRLGVHHKG 120
E +EE + R VL LN +V+ WI+ I + +P A +V G+I+ GSYR VH G
Sbjct: 39 EPEEEANRRRSVLEHLNCIVRAWIRSTMITEFRMPAEAAAQVEGRIFATGSYRYNVHASG 98
Query: 121 ADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA 180
+DID + +AP + R +F + +L VT+L + +A VP+I M DGI+ID+ F
Sbjct: 99 SDIDIVLIAPNRITREHFFDTLAPRLSHEARVTELHCIRDARVPLIAMVVDGIDIDLSFG 158
Query: 181 RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA 240
+ +P+ + D LL+ LD + V S N RV I+ LVP+ +FR ALR IK W
Sbjct: 159 SIRQDRVPEVIT---DDLLRGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWG 215
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQP------- 293
K GIYSN G+ G+ WA+LVA + Q +PN A+ +V +FF ++ W P P
Sbjct: 216 KARGIYSNTFGFPSGIGWAILVAFVSQCHPNQNAAGMVVRFFRIYHSWFSPNPHESGKEN 275
Query: 294 --VLLKKPDNVNLGFP-VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEF 350
+ L + V WDPR + +D L P++TPA P N+ +NV+I+ + EF
Sbjct: 276 RAIYLTETMRVKTSLGRCWDPRESKSDALALFPVLTPAVPYGNACYNVTITNLRQLCSEF 335
Query: 351 KQGKTISEDI-----------YNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEW 399
+G I + +W+K+ E F +YR+YL + + E +
Sbjct: 336 ARGHEICSSCIGMSVNDTRTKFGKYGLWNKILEPVKVFGEYRYYLHIQITCTDPEAYQGY 395
Query: 400 CGLIESKVRHLIG--------NLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGK 451
+ESK+R L +LE H+ L +NP Y V A +
Sbjct: 396 VDAVESKIRFLWAGTAESRAQSLESYKHVRL-QLNPRRYEAPEEVEARSKLLKNVRGSAH 454
Query: 452 EEGGENTSPPVS-------------------GVASMWFIGL--DFIAANVILNLTYDIQH 490
+ G +N + G + ++IG+ D AA+ ++L I+
Sbjct: 455 DGGADNAGSVSTGAAGAGNGNNSSAVTAISKGFSCHYYIGMSVDPKAASGKIDLAPSIRG 514
Query: 491 FTNAVHWQATQSKMMKDGM-KIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRK 549
F N V Q + K+G+ K+ V V + +++ LP K + + A R+
Sbjct: 515 FHNVVR----QLRQYKEGVTKLPV--VTVEDITKVLPFVKEAAGYKDIESEMPSPADSRE 568
Query: 550 SDQALDELGDKS 561
+ + LG S
Sbjct: 569 ATENNGSLGGAS 580
>gi|401418000|ref|XP_003873492.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489722|emb|CBZ24982.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 706
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 212/402 (52%), Gaps = 36/402 (8%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAK-NIPPTVAEKVGGKIYTFGSYRLGVHHKG 120
E +EE + R VL ++ N+V+ WI+ I + +P A +V G+I+ GSYR VH G
Sbjct: 42 EPEEESNRRRSVLERIVNVVRVWIRHTMITEFRMPEAAAAQVEGRIFATGSYRYNVHTSG 101
Query: 121 ADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA 180
+DID + +AP + R +F++ +LK VT+L + E+ VP+I M DGI+ID+ F
Sbjct: 102 SDIDMVLIAPSRITREHFFNTLAPRLKGEPWVTELHCIRESRVPIIAMVCDGIDIDLSFG 161
Query: 181 RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA 240
+ +P+ + D LL+ LD++ V S N RV I+ LVPN FR LR +K W
Sbjct: 162 SIRQDRVPEVIT---DDLLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWG 218
Query: 241 KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQP------- 293
K IYSN G+ G+ WA+L A +CQ YPN A+ ++ +FF + W P P
Sbjct: 219 KARSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMITRFFRTYHTWFKPNPHETGTEN 278
Query: 294 --VLLKKP--DNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEE 349
+ L + +LG WDPR + +D L P++TPA P N+ +NV+++ + +E
Sbjct: 279 RAIYLTESMRARTHLGRG-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDE 337
Query: 350 FKQGK-TISEDI----------YNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE 398
F++G +S+D+ + +W ++ E FF K++HYL + S AE
Sbjct: 338 FQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQA 397
Query: 399 WCGLIESKVRHL-IGNLERNPH-------INLAHVNPECYTD 432
+ +ES++R L GN H + L H+NP + D
Sbjct: 398 YADGVESRIRILWAGNASSRGHTLEDYRQLRL-HLNPHRFED 438
>gi|255556450|ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis]
Length = 492
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 208/374 (55%), Gaps = 9/374 (2%)
Query: 43 LDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKV 102
++ +R+ L + + + + E R V+ L +V W K+V+ + +P
Sbjct: 1 MEEERSLSLLKFMANEGLVPSPREEEKRKNVILNLKQIVVAWAKKVAWQRRLPRLQIAST 60
Query: 103 GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEA 161
I T+GSY LGV+ +DIDA+CV P A D+F LK EV+++ V++A
Sbjct: 61 NATILTYGSYGLGVYGPESDIDAICVGPFFATLAEDFFIVLRNMLKNRPEVSNIHCVKDA 120
Query: 162 FVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILR 221
VP+++ FDGI ID+ +A+L + +PD++D+ + L N+D+ +SL+G R IL+
Sbjct: 121 KVPLMRFKFDGISIDLPYAQLKVLAVPDNVDMLNPFFLMNIDETSWKSLSGVRANQRILQ 180
Query: 222 LVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKF 281
VPN+ENF+ LR IKLWA++ G+ N+ G+LGGV A+L A +CQ YPNA+ S L+ F
Sbjct: 181 FVPNLENFQSMLRCIKLWARRRGVCGNLNGFLGGVHLAILSAVVCQKYPNASVSALISNF 240
Query: 282 FLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSIS 341
F ++ W WP PV+L+ D ++ P + + MPI P P + N++ S
Sbjct: 241 FATYATWPWPTPVMLQ--DGMS------SPAEDFIETRSFMPIRLPCSPHEYCHSNITKS 292
Query: 342 TRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCG 401
T ++ EF +G ++++D+ W+ +FE + KY ++ + S+ ++ +W G
Sbjct: 293 TYYRIRTEFLRGHSLTKDLLKPDFDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEVGDWVG 352
Query: 402 LIESKVRHLIGNLE 415
++S+ R L+ LE
Sbjct: 353 WVKSRFRALLLKLE 366
>gi|340500382|gb|EGR27268.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 512
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 219/399 (54%), Gaps = 18/399 (4%)
Query: 38 SPPNQLDL-QRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPP 96
PP L + Q+ + E K YN SET+EE+ + + + KL ++ WI +V+ K I
Sbjct: 32 QPPEALKISQKILNILE--KEYNYSETEEEIKQKDKKVQKLREIILNWISQVAEEKQIDF 89
Query: 97 TVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTVDEVTDL 155
K G + FGSY+L V+ K +DIDA+C P V+ + +F F L EV D+
Sbjct: 90 ----KYNGDLLIFGSYKLKVNQKNSDIDAVCFVPSFVECKKHFFGDLFHILSQKKEVEDI 145
Query: 156 RAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRV 215
+++ VP+IKM + GI D+ F++ + + D+D++ +L+ +D+K +R+LNG RV
Sbjct: 146 FSIQHTSVPLIKMRYFGIPFDISFSKQSQSQFKSDLDIKSIQILQGMDEKSIRALNGYRV 205
Query: 216 TDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAS 275
+ + + N + F+ AL+ IKLWA+ IYSN+LGYL G++W++LVA+ICQLYPN
Sbjct: 206 AEWFNQNIKNKDTFKKALKCIKLWAQNRCIYSNILGYLNGIAWSILVAKICQLYPNYFVY 265
Query: 276 TLVCKFFLVFSQWKWPQ-----PVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYP 330
++ +FF ++S+WKW + + N + W P M IITP +P
Sbjct: 266 GIIERFFFLYSRWKWHDMAVQIEYIQEDIYNQMICGNQWVPENKGISN---MMIITPCFP 322
Query: 331 QQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWD--KLFETPNFFTKYRHYLVLIA 388
N +NV+ ST ++QE+F+ G I ++I ++ +D LF+ FF +Y +L +
Sbjct: 323 CINCAYNVTESTLRVIQEQFQYGYRILDEIQKNQSHYDYQDLFKPFEFFKRYNAFLQIRI 382
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNP 427
+ + + +W G +E +R L +E + ++P
Sbjct: 383 LAKNKNEYFQWKGHVEINLRKLTKIIENGKLSKIILIHP 421
>gi|294892267|ref|XP_002773978.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239879182|gb|EER05794.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 534
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 179/556 (32%), Positives = 265/556 (47%), Gaps = 54/556 (9%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
Q + +G++ ++LS D+ T + + L ++EE V ++ LV
Sbjct: 5 QEHSQQQWGVSPPVSLSKATPKDIAATDVMMKVLDEEAPPASEEERQLHKRVFELMSRLV 64
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
EW KE + + + E ++ GS RLG+ +DID + VA V R +F
Sbjct: 65 TEWGKEYAFSTGLK---EEDCRCELMAIGSARLGLQDPSSDIDCVVVAAHKVTRDAFFEL 121
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
F KL +++VT+L V +A VPVIKM F G+++D+L+ LA +D DD LL
Sbjct: 122 FPLKLSELNDVTNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGPAIDPADDNLLCG 181
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D+K RS+NG RV+D I VP+ +F ALR I+ WA++ GIYSN LGYLGGVSWA+L
Sbjct: 182 MDEKSARSINGVRVSDAIKACVPHFAHFLGALRVIRAWARRRGIYSNALGYLGGVSWAIL 241
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKW---PQPVLLKKPDNVN-LGF---PVWDP--- 311
VAR+CQL+PN S LV +FF V+S+W W V+L+ + N GF VW P
Sbjct: 242 VARVCQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVWCPPPK 301
Query: 312 RVNVADRYHL----MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTI--SEDI-YNGK 364
R L M +ITPAYP NSTF V+ T +++E ++G I S+ + +
Sbjct: 302 RTTTDQPLPLAASPMAVITPAYPSMNSTFGVTRMTMDTIKKELERGAGIISSKGVDLRSR 361
Query: 365 TMWDKLFETPNFF----TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHI 420
W+ L E +FF Y+ +L + S GL+ SK++ L+ L + P +
Sbjct: 362 ECWETLLEPIHFFDYDQGGYKQFLQIEIGGASELSHKSAEGLVNSKLKPLL--LRKMPEV 419
Query: 421 NLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANV 480
N Y TG +A E S F+GL
Sbjct: 420 APEDTNKAPYRAWTGAVALEDPYKEYP-----------------YCSALFVGLSIPPG-- 460
Query: 481 ILNLTYDIQHFTNAVHWQ-ATQSKMMKDG--MKIEVRHVKKKQLSEYLPAHMLKKDKKTK 537
++L ++ F + + ATQ K G + VRHV L + L +K +
Sbjct: 461 -MDLRPAVREFMERLGIELATQMPEYKAGGMFDVRVRHVAGPSLPNTV--KCLTAKRKAE 517
Query: 538 SG---DQNTSAKKRKS 550
G D + AKK +S
Sbjct: 518 EGLPEDADVKAKKVRS 533
>gi|225432026|ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 214/407 (52%), Gaps = 18/407 (4%)
Query: 42 QLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEK 101
+++ +R+ L + + + + EE R V+ KL +V W+K V+ + P
Sbjct: 70 RMEHRRSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQRPKQQIAV 129
Query: 102 VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD-YFSSFFEKLKTVDEVTDLRAVEE 160
I T+GSY LGVH +DIDALCV P AD +F L++ EV+++ V++
Sbjct: 130 TSATILTYGSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKD 189
Query: 161 AFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEIL 220
A VP+++ FDGI +D+ +A+L L +P+++++ + L+N+D+ +SL+G R + IL
Sbjct: 190 AKVPLMRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECIL 249
Query: 221 RLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCK 280
+LVPN+ENF+ LR IKLWAK+ G+Y N+ GY GGV A+L A +CQ P+A + L+
Sbjct: 250 QLVPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSS 309
Query: 281 FFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSI 340
FF FS W WP PV L ++ L P + LMPI P P N++
Sbjct: 310 FFKTFSGWPWPTPVAL---EDGRL------PTGGTRETRALMPIQLPCSPYGYCHSNITK 360
Query: 341 STRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWC 400
ST + E G ++ D+ W+ +FE + KY ++ + SS + ++ +W
Sbjct: 361 STFYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWV 420
Query: 401 GLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
G ++S+ R L+ +E V C + T I +G P +
Sbjct: 421 GWVKSRFRFLLAKVE--------EVQGLCDPNPTEFIDPDAGGPNVV 459
>gi|147856999|emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 214/407 (52%), Gaps = 18/407 (4%)
Query: 42 QLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEK 101
+++ +R+ L + + + + EE R V+ KL +V W+K V+ + P
Sbjct: 111 RMEHRRSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQRPKQQIAV 170
Query: 102 VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD-YFSSFFEKLKTVDEVTDLRAVEE 160
I T+GSY LGVH +DIDALCV P AD +F L++ EV+++ V++
Sbjct: 171 TSATILTYGSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKD 230
Query: 161 AFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEIL 220
A VP+++ FDGI +D+ +A+L L +P+++++ + L+N+D+ +SL+G R + IL
Sbjct: 231 AKVPLMRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECIL 290
Query: 221 RLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCK 280
+LVPN+ENF+ LR IKLWAK+ G+Y N+ GY GGV A+L A +CQ P+A + L+
Sbjct: 291 QLVPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSS 350
Query: 281 FFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSI 340
FF FS W WP PV L ++ L P + LMPI P P N++
Sbjct: 351 FFKTFSGWPWPTPVAL---EDGRL------PTGGTRETRALMPIQLPCSPYGYCHSNITK 401
Query: 341 STRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWC 400
ST + E G ++ D+ W+ +FE + KY ++ + SS + ++ +W
Sbjct: 402 STFYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWV 461
Query: 401 GLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEIT 447
G ++S+ R L+ +E V C + T I +G P +
Sbjct: 462 GWVKSRFRFLLAKVE--------EVQGLCDPNPTEFIDPDAGEPNVV 500
>gi|119620436|gb|EAX00031.1| poly(A) polymerase gamma, isoform CRA_c [Homo sapiens]
Length = 425
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/278 (46%), Positives = 168/278 (60%), Gaps = 31/278 (11%)
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYR
Sbjct: 1 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYR 60
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGS 441
HY+VL AS+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 61 HYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG--------- 111
Query: 442 GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHW 497
KE +N SMWF+G+ F A +V ++LTYDIQ FT+ V+
Sbjct: 112 --------NKEHHKDN------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYR 157
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDEL 557
QA M+K+GMKIE HVKKKQL YLPA +L+K KK D N S+ +S + +
Sbjct: 158 QANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDS 217
Query: 558 GDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNS 595
R D+D+ + N+ ++ D S TE NS
Sbjct: 218 SCLDSSR-DTDNGT---PFNSPASKSDSPSVGETERNS 251
>gi|355709241|gb|AES03526.1| poly polymerase alpha [Mustela putorius furo]
Length = 358
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 152/227 (66%), Gaps = 27/227 (11%)
Query: 313 VNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFE 372
VN +DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE
Sbjct: 1 VNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFE 60
Query: 373 TPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTD 432
PNFF KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 61 APNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF-- 118
Query: 433 TTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDI 488
+P+ + +E +MW IGL F + N+ ++LTYDI
Sbjct: 119 ---------PAPKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDI 157
Query: 489 QHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
Q FT+ V+ QA SKM + MKI HVK+KQL + LP+H+L+K KK
Sbjct: 158 QSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPSHVLQKKKK 204
>gi|297829196|ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 201/370 (54%), Gaps = 14/370 (3%)
Query: 65 EELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADID 124
E+ R V++KL +V W+K V+ +P + I +GSY LGV+ +DID
Sbjct: 37 EDQEKRRVVINKLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGLGVYGSESDID 96
Query: 125 ALCVAPRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
ALC+ P + D+F S + LK+ EV+++ V++A VP+I+ FDGI +D+ +A+L
Sbjct: 97 ALCIGPFFASISEDFFISLRDMLKSRREVSEVHCVKDAKVPLIRFKFDGILVDLPYAQLR 156
Query: 184 LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
+ IP+++D+ + L+++D+ +SL+G R IL+LVP++E F+ LR +KLWAK+
Sbjct: 157 VLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLRCVKLWAKRR 216
Query: 244 GIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN 303
G+Y N+ G+LGGV A+L A +C NA S+L+ FF +F+ W+WP PV+L +
Sbjct: 217 GVYGNLNGFLGGVHMAILAAFVCGYESNATLSSLLANFFYIFAHWQWPTPVVLLEDTYPA 276
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG 363
G P LMPI P Q N++ ST + EF +G +++D
Sbjct: 277 TGAPP-----------GLMPIQLPCGSHQYCNSNITRSTFYKIMAEFLRGHNLTKDYLKP 325
Query: 364 KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLA 423
W LFE + Y + + S+ + ED +W G ++S+ R L+ +E +
Sbjct: 326 NFSWKNLFELYPYENTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLSKIEE--VYGIC 383
Query: 424 HVNPECYTDT 433
NP Y +T
Sbjct: 384 DPNPTEYVET 393
>gi|12322673|gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 199/369 (53%), Gaps = 13/369 (3%)
Query: 65 EELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADID 124
E+ R V+++L +V W+K V+ +P + I +GSY LGV+ +DID
Sbjct: 11 EDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGLGVYGSESDID 70
Query: 125 ALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLAL 184
ALC+ P AD+F S + LK+ EV++L V++A VP+I+ FDGI +D+ +A+L +
Sbjct: 71 ALCIGPFFASIADFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGILVDLPYAQLRV 130
Query: 185 KEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHG 244
IP+++D+ + L+++D+ + L+G R IL+LVP++E F+ LR +KLWAK+ G
Sbjct: 131 LSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRG 190
Query: 245 IYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNL 304
+Y N+ G+LGGV A+L A +C PNA S+L+ FF F+ W+WP PV+L + +
Sbjct: 191 VYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPVVLLEDTYPST 250
Query: 305 GFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGK 364
G P LMPI P Q ++ ST + EF G +++D
Sbjct: 251 GAPP-----------GLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLKLN 299
Query: 365 TMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
W LFE + Y + + S+ + ED +W G ++S+ R L+ +E +
Sbjct: 300 FSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIEE--VYGICD 357
Query: 425 VNPECYTDT 433
NP Y +T
Sbjct: 358 PNPTEYVET 366
>gi|224099105|ref|XP_002311376.1| predicted protein [Populus trichocarpa]
gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 199/354 (56%), Gaps = 11/354 (3%)
Query: 65 EELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADID 124
EE R ++ KL +V W K+V+ + +P I T+GSY LG H +DID
Sbjct: 11 EEDEKRKIIVEKLKTIVVAWAKKVAWQRCLPKQQIAATSATILTYGSYGLGFHDPESDID 70
Query: 125 ALCVAPRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
ALCV P A D+F LK+ E++++ V+++ VP+++ FDGI +D+ +A+L
Sbjct: 71 ALCVGPFFATIAEDFFIVLHNILKSRPEISEIHCVKDSKVPLMRFTFDGISVDLPYAQLK 130
Query: 184 LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
+ +P+++D+ + LL N+D+ +SL+G R IL LVPN+ NF+ LR +KLWAK+
Sbjct: 131 VLNVPENVDILNLSLLTNIDETSWKSLSGVRANQRILLLVPNLMNFQSMLRCLKLWAKRR 190
Query: 244 GIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN 303
G+Y N+ G+LGGV A+L A +CQ PNA+ L+ FF ++ W WP PV+L+ + N
Sbjct: 191 GVYGNLNGFLGGVHLAVLAAFVCQNQPNASVIALISNFFSTYAMWPWPTPVMLQDGMSSN 250
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG 363
+ +V + MPI P P + NV+ ST T ++ EF +G +++ D+
Sbjct: 251 VE--------DVIETRFYMPIRLPCSPYEYCHSNVTKSTFTKIRAEFLRGHSMTRDLLKL 302
Query: 364 KTMWD--KLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
K D ++FE + T Y ++ + S+ ++ +W G ++S R L+ LE
Sbjct: 303 KLDSDVGRIFEPFPYSTNYTRFVKIYLSAPDQDELGDWVGWVKSHFRCLLLKLE 356
>gi|402468353|gb|EJW03519.1| hypothetical protein EDEG_00201 [Edhazardia aedis USNM 41457]
Length = 1051
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 180/339 (53%), Gaps = 70/339 (20%)
Query: 151 EVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSL 210
++T+L +E+A+VP+IK + I ID+LF R+ L + + L D LLKN+D K + S+
Sbjct: 614 KITNLHKIEDAYVPLIKFEINYISIDLLFTRVPLPSLSNLNLLDD-TLLKNMDDKSILSI 672
Query: 211 NGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYP 270
NG RVTD ++ LVPN++ F ALR IK WAK+ GIY N GY GGV++A+LVARICQ YP
Sbjct: 673 NGSRVTDMLINLVPNVKVFHSALRAIKYWAKRRGIYGNSFGYPGGVAYAILVARICQYYP 732
Query: 271 NAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYP 330
N + T++ KFF ++S WKWP PVLLK + N +WDP+V+ DR H MPIITPAYP
Sbjct: 733 NKDSYTILYKFFEIYSNWKWPNPVLLKHNVDRNFNLKIWDPKVHQTDRMHKMPIITPAYP 792
Query: 331 QQNSTFNVSISTRTIMQEE-------FKQGKTIS-------------------------- 357
ST NV+ +T ++ EE FK+ K I
Sbjct: 793 SICSTHNVTNTTLGVINEELKRCLDIFKESKNIDSSFDETKIFGHESDINCASKQSIDPK 852
Query: 358 ----------EDIYNGKTMWD---------------------KLFETPNFFTKYRHYLVL 386
E+ N K WD KLF+ +FF KY+ YL
Sbjct: 853 SKKLKIGEDHENNINTKVKWDLNNLSFDNLKVFYEKFYGLLKKLFQQSDFFKKYKFYL-- 910
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHV 425
++ + +W G IESK+R L LE + ++ ++
Sbjct: 911 ---NIKLTNDDKWKGFIESKIRLLCAKLENSEGFSIGYM 946
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 17/120 (14%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T+G+T L++S +D+ +++ + + L N E ++ SR VL L+ L ++ K
Sbjct: 6 THGITGPLSMSGSKLIDMYKSQIINDFLVKSNFFEAHQDSVSRERVLGYLSFLADKFCK- 64
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
GKI+TFGSYRLGVH KGADID L V+ V D+F+ FFE LK
Sbjct: 65 ----------------GKIFTFGSYRLGVHQKGADIDTLLVSASDVTLIDFFNGFFEMLK 108
>gi|32527644|gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 200/370 (54%), Gaps = 14/370 (3%)
Query: 65 EELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADID 124
E+ R V+++L +V W+K V+ +P + I +GSY LGV+ +DID
Sbjct: 11 EDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGLGVYGSESDID 70
Query: 125 ALCVAPRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
ALC+ P A D+F S + LK+ EV++L V++A VP+I+ FDGI +D+ +A+L
Sbjct: 71 ALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGILVDLPYAQLR 130
Query: 184 LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
+ IP+++D+ + L+++D+ +SL+G R IL+LVP++E F+ LR +KLWAK+
Sbjct: 131 VLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLRCVKLWAKRR 190
Query: 244 GIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN 303
G+Y N+ G+LGGV A+L A +C PNA S+L+ FF F+ W+WP PV+L + +
Sbjct: 191 GVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFALWQWPTPVVLLEDTYPS 250
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG 363
G P LMPI P Q ++ ST + EF G +++D
Sbjct: 251 TGAPP-----------GLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLKL 299
Query: 364 KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLA 423
W LFE + Y + + S+ + ED +W G ++S+ R L+ +E +
Sbjct: 300 NFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIEE--VYGIC 357
Query: 424 HVNPECYTDT 433
NP Y +T
Sbjct: 358 DPNPTEYVET 367
>gi|357112525|ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 537
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 214/384 (55%), Gaps = 17/384 (4%)
Query: 35 LNLSPPN--QLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAK 92
L L P +D+ R+ L + + V + EE R EV+ +L+ +V +W K+V+ +
Sbjct: 61 LRLDPATTVHMDVVRSVSLLKFIAGAGVVPSQEEEQRREEVVRELDKIVMDWAKQVAYDQ 120
Query: 93 NIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTVDE 151
+ G + TFGSY LG + +DIDA+CV P + +F + L+ E
Sbjct: 121 RDKHWITT---GTVLTFGSYALGAYGPESDIDAVCVGPCVASLQHHFFVVLRQMLEERPE 177
Query: 152 VTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLN 211
V+DL ++E A VP+++ F+G+ +D + +L + + + D LL+ +D R L+
Sbjct: 178 VSDLHSIESARVPLMRFKFNGVSVDFPYVQLPVINAAEAIRAFDPRLLEKVDGASWRCLS 237
Query: 212 GCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPN 271
G RV +I++LVPN++ F++ LR +KLWA+K GIY +++GY G+ A+L A +C+ +PN
Sbjct: 238 GVRVNRQIMQLVPNMKRFQVLLRCLKLWARKRGIYCHLVGYFAGIHLAVLGAYVCRRHPN 297
Query: 272 AAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQ 331
A+ +TL FF +FS W WP PV L P+W P D LMPI+ P +P
Sbjct: 298 ASVNTLFSMFFDIFSHWPWPLPVALHDQA------PLWGP-----DGCSLMPIVMPCFPP 346
Query: 332 QNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSV 391
+ +++ ST ++EE ++G +++DI N W +F + KY H+L ++ S+
Sbjct: 347 EFCASSITKSTFNKIKEELRRGFALTKDIRNVDIDWTWIFAPYPYTVKYEHFLHMVLSAP 406
Query: 392 SAEDQLEWCGLIESKVRHLIGNLE 415
+ E+ +W G ++S+ R+LI LE
Sbjct: 407 TTEELRDWVGWVKSRFRNLILKLE 430
>gi|145338191|ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase [Arabidopsis thaliana]
gi|332640894|gb|AEE74415.1| poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
Query: 65 EELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADID 124
E+ R V+++L +V W+K V+ +P + I +GSY LGV+ +DID
Sbjct: 35 EDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGLGVYGSESDID 94
Query: 125 ALCVAPRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
ALC+ P A D+F S + LK+ EV++L V++A VP+I+ FDGI +D+ +A+L
Sbjct: 95 ALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGILVDLPYAQLR 154
Query: 184 LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
+ IP+++D+ + L+++D+ + L+G R IL+LVP++E F+ LR +KLWAK+
Sbjct: 155 VLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLLRCVKLWAKRR 214
Query: 244 GIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN 303
G+Y N+ G+LGGV A+L A +C PNA S+L+ FF F+ W+WP PV+L + +
Sbjct: 215 GVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPVVLLEDTYPS 274
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG 363
G P LMPI P Q ++ ST + EF G +++D
Sbjct: 275 TGAPP-----------GLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLKL 323
Query: 364 KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLA 423
W LFE + Y + + S+ + ED +W G ++S+ R L+ +E +
Sbjct: 324 NFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIEE--VYGIC 381
Query: 424 HVNPECYTDT 433
NP Y +T
Sbjct: 382 DPNPTEYVET 391
>gi|340506959|gb|EGR32994.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 502
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 205/364 (56%), Gaps = 17/364 (4%)
Query: 72 EVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPR 131
E +L ++K WI++++ K I GG + FGSY+L V+ +G+DIDA+C+ P
Sbjct: 64 EAAKQLRIIIKNWIQQINAEKQI----ENNHGGDLLFFGSYKLKVNSRGSDIDAVCLCPF 119
Query: 132 HVDR-ADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDD 190
+V+R ++F L E+T+L ++EA VP+IKM F GI D+ FAR + D
Sbjct: 120 YVEREKNFFGDLVHILSQKKEITELFPIQEASVPIIKMQFQGILFDLSFARAPTQFQSDK 179
Query: 191 MDLRDDMLLKNLDQKCVRSLNGCRVTDEILRL--VPNIENFRLALRTIKLWAKKHGIYSN 248
+DL + +L +D++ +S NG RV + + + + N ENF+ L+ IKLWA+ GIYSN
Sbjct: 180 IDLTSNQMLLGMDERSCKSFNGYRVAEWLSKKENIQNYENFQSILKCIKLWAQNRGIYSN 239
Query: 249 VLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQ-PV----LLKKPDNVN 303
++GYL G+ W +LV++ICQL+PN + + L+ +FF ++S+W+W PV ++ N
Sbjct: 240 IIGYLSGIGWTILVSKICQLFPNYSLNQLLERFFFLYSRWRWQDFPVQVEYIVDDVANSK 299
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG 363
L W P + M IITP +P N NVS +T I+QE+ G I NG
Sbjct: 300 LSADQWRPEYKSS-----MMIITPCFPCMNCAHNVSSTTLRIIQEQLWHGYETICKIQNG 354
Query: 364 KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLA 423
+ LF++ FF KY+H+L + + + D W G +ES +R L E ++NL
Sbjct: 355 SKNYSDLFKSFKFFKKYKHFLEIKILATNKNDYTVWKGHVESGLRKLTRLFESPQYMNLL 414
Query: 424 HVNP 427
V+P
Sbjct: 415 EVHP 418
>gi|51900536|gb|AAU13916.1| PAP alpha [Candida dubliniensis]
Length = 360
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 140/204 (68%), Gaps = 1/204 (0%)
Query: 222 LVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKF 281
LVP F+ ALR IK+WA++ +Y N+ G+ GGV+WAMLVARICQLYPNA +S +V KF
Sbjct: 1 LVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSVIVEKF 60
Query: 282 FLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSIS 341
F ++++W WP+PVLLK ++ L VW+PR+ DR H MP+ITPAYP +T N++ S
Sbjct: 61 FNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSS 120
Query: 342 TRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSV-SAEDQLEWC 400
T+ ++ E +G +I +DI+ GK W LFE FF KY+ YL ++A+++ SAE+ +W
Sbjct: 121 TQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLCVVAATIDSAEEHKKWS 180
Query: 401 GLIESKVRHLIGNLERNPHINLAH 424
G IESK+R L+ LE + +AH
Sbjct: 181 GFIESKLRQLVLKLEVAEGVEIAH 204
>gi|134055882|emb|CAK44143.1| unnamed protein product [Aspergillus niger]
Length = 393
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 135/194 (69%), Gaps = 1/194 (0%)
Query: 238 LWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK 297
LWA++ IYSN++G+ GGV+WAMLVAR+CQLYP A S +V KFF + ++W WPQPVLLK
Sbjct: 12 LWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLK 71
Query: 298 KPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTIS 357
++ L VW+P++ DR+HLMPIITPAYP +T NVS+ST+ ++ E ++G I
Sbjct: 72 PIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIV 131
Query: 358 EDIYNGKTMWDKLFETPNFFTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLER 416
+ I+ + W+ LF FFTK Y++YL + ASS + E + W GL+ESK+RHL+G L+R
Sbjct: 132 DKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDR 191
Query: 417 NPHINLAHVNPECY 430
I +AH P+ +
Sbjct: 192 KATIAIAHPFPKGF 205
>gi|317026523|ref|XP_001389757.2| poly(A) polymerase Pap [Aspergillus niger CBS 513.88]
Length = 428
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 135/194 (69%), Gaps = 1/194 (0%)
Query: 238 LWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK 297
LWA++ IYSN++G+ GGV+WAMLVAR+CQLYP A S +V KFF + ++W WPQPVLLK
Sbjct: 51 LWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLK 110
Query: 298 KPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTIS 357
++ L VW+P++ DR+HLMPIITPAYP +T NVS+ST+ ++ E ++G I
Sbjct: 111 PIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIV 170
Query: 358 EDIYNGKTMWDKLFETPNFFTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLER 416
+ I+ + W+ LF FFTK Y++YL + ASS + E + W GL+ESK+RHL+G L+R
Sbjct: 171 DKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDR 230
Query: 417 NPHINLAHVNPECY 430
I +AH P+ +
Sbjct: 231 KATIAIAHPFPKGF 244
>gi|429964357|gb|ELA46355.1| hypothetical protein VCUG_02160 [Vavraia culicis 'floridensis']
Length = 708
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 149/215 (69%), Gaps = 4/215 (1%)
Query: 173 IEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLA 232
I+ID++FARL + +I ++L D LLKNLD+K V SLNG RVTDEIL LVPN + F A
Sbjct: 314 IKIDLVFARLNVFKIDSSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLVPNKKVFHGA 373
Query: 233 LRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQ 292
LR IK WAK+ G+ ++ GY GGV++A+ VARICQL+PN T++CK+F ++ +WKWP
Sbjct: 374 LRCIKYWAKRRGLTGHLYGYFGGVAYAISVARICQLFPNMCEYTMICKYFELYKEWKWPT 433
Query: 293 PVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQ 352
PV+LKK +N+N VWDP+++ +D++H MP+ITP+YP ST N+ ST +EE ++
Sbjct: 434 PVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIINSTMKRYKEELER 493
Query: 353 GKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
G + + GK W + F + +FF +Y+ +L +
Sbjct: 494 GHRL---LAEGKE-WKEFFRSTDFFQRYKSFLAVF 524
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 94/165 (56%), Gaps = 2/165 (1%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T L++ + D+ R+ L L + ET+EE +R VL +L+ + +IK +
Sbjct: 9 YGITGPLSVKESPEDDIARSSSLQAFLLSSKIYETNEEAITRERVLGRLSYMFDNFIKAI 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
K + + + G+IYTFGSYRLGVH +G+DID LCVAP +VDR ++F F+ L
Sbjct: 69 GTKKGLTDSDIKAASGRIYTFGSYRLGVHARGSDIDTLCVAPVYVDRKEFFEEFYSMLSD 128
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDL 193
V ++ VE+A+VP++++ + ID A+ + MD+
Sbjct: 129 V--FAEVEKVEDAYVPLMQLVYREHRIDECEGCGAMSGDGNKMDI 171
>gi|145505515|ref|XP_001438724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405896|emb|CAK71327.1| unnamed protein product [Paramecium tetraurelia]
Length = 487
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 219/401 (54%), Gaps = 46/401 (11%)
Query: 64 DEELSSRME--VLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGA 121
D+E+S + + ++ +L + W+K + +V ++ G++ FGSYR G + K +
Sbjct: 49 DDEISKKTKDKLIEELRQNIIRWLK-------LYQSVEQEFAGELAVFGSYRFGANGKDS 101
Query: 122 DIDALCVAPRHVDRADYFSSFFEKLKTV----DEVTDLRAVEEAFVPVIKMNFDGIEIDM 177
DID + +AP +DR +F F++L ++ +VT+L ++EA VP+I+ F GI+ D+
Sbjct: 102 DIDLIILAPPQIDRELHF---FQQLPSILSSNSKVTNLYCIQEAMVPLIRFKFAGIQFDL 158
Query: 178 LFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIK 237
+FA +K+I + D + D+K RSLNG +V+D + +++ L+ IK
Sbjct: 159 VFA--CVKKIMKPLSQSDPV-----DEKSSRSLNGLKVSDYFSKYCHQ-KSYLSFLKFIK 210
Query: 238 LWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQ-PVLL 296
WA GIY NV+GYLGG+SW +L +I QLYPN + L+ +FF +FSQWKW + PV++
Sbjct: 211 AWAINRGIYGNVMGYLGGISWQILTHKIFQLYPNYSVQGLIERFFFIFSQWKWNELPVVI 270
Query: 297 KKPDNVNLGFPVWDPRV--NVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGK 354
+K D +W + ++++M I+TP YP NS +NVS T TI++E+ K
Sbjct: 271 QKCDE------IWRNSLFEQQQKQHNVMSILTPVYPYINSAYNVSNCTFTIIEEQLKLAN 324
Query: 355 TISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNL 414
I + I + W L + FF Y YL + A S + +D ++W IESK+R L L
Sbjct: 325 IIMQKICLSELQWSDLLKKIQFFDIYYTYLQIRALSKNKDDLIQWKSHIESKLRKLNKML 384
Query: 415 ERNPHINLA---HVNPECY---------TDTTGVIANGSGS 443
+ +N A H+ P+ + DT G + N S S
Sbjct: 385 DEG-DVNKAIEFHLYPKSFQTDYVQGDENDTPGSLFNFSES 424
>gi|441666296|ref|XP_003275413.2| PREDICTED: poly(A) polymerase alpha [Nomascus leucogenys]
Length = 432
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 143/218 (65%), Gaps = 27/218 (12%)
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF KY+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGS 441
HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 61 HYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF----------- 109
Query: 442 GSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHW 497
+P+ + +E +MW IGL F + N+ ++LTYDIQ FT+ V+
Sbjct: 110 PAPKENPDKEE------------FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYR 157
Query: 498 QATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKK 535
QA SKM + MKI HVK+KQL + LP H+L+K KK
Sbjct: 158 QAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKK 195
>gi|118376886|ref|XP_001021625.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|89303391|gb|EAS01379.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 707
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 197/357 (55%), Gaps = 22/357 (6%)
Query: 40 PNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSI-AKNIPPTV 98
P + D Q + + + + Y E+L + +++ K+ +V +W+ ++I + IP V
Sbjct: 142 PQEQDYQESSYIKQMIDKYFYHPEKEKL--KEQIIMKIQEIVNQWMVNININERKIPEQV 199
Query: 99 AEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFS-SFFEKLKTVDEVTDLRA 157
A ++ FGSY LGV D+D +C+AP VDR +F+ ++ + +D V
Sbjct: 200 AHMQLARVLPFGSYFLGVSSVDGDVDLVCIAPNFVDRFKHFNGQLYDMISNMDGVEYHNN 259
Query: 158 VEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLR-DDMLLKNLDQKCVRSLNGCRVT 216
V +A VP+++ G+ ID+ FA+L ++ +PDD+D + D L +D++ S+NG R
Sbjct: 260 VIDAKVPIMQFEIQGVPIDISFAQLDVETLPDDIDKQIPDTHLTMMDERDKLSINGYRCN 319
Query: 217 DEILRLV--------PNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
I+R V + + F+ +L+ IK+WA+ +GIY N LGYLGG+SWA+L+A+ICQ+
Sbjct: 320 QAIIRYVTEHSEDKQQSKQRFQESLKVIKIWARNNGIYENRLGYLGGISWALLLAKICQM 379
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
+PN + ++ +FFL +S WKWP +L LG P P ++ M I TPA
Sbjct: 380 FPNLEVNGIIEQFFLQYSSWKWPTMEVL-------LG-PFSQPEERQKNQKFEMSIYTPA 431
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQG-KTISEDIYNGKTMWDKLFETPNFFTKYRHYL 384
YP+ NST V I+ + K+ + I E+I G+ WD+L + +F KY ++
Sbjct: 432 YPEYNSTERVKKINLEIIDYKIKEANRIIQEEIKTGQAPWDRLIQEEDFLNKYTKFI 488
>gi|326508888|dbj|BAJ86837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 203/376 (53%), Gaps = 17/376 (4%)
Query: 42 QLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEK 101
++D +RT L + L T EE +R V+ +L +V +W K V+ + +PP +
Sbjct: 72 EMDYRRTHSLIQFLTDEGAIPTPEEEETRELVIRELKKIVTDWAKGVASEERVPP---RR 128
Query: 102 VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK-LKTVDEVTDLRAVEE 160
V + T+GSY LG H +DIDALCV P + +F + LK EV+ L+ VE
Sbjct: 129 VTATVLTYGSYTLGAHGPESDIDALCVGPCIANLPHHFFVVLRQILKCRPEVSGLQTVEN 188
Query: 161 AFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEIL 220
A VP+++ F GI +D+ +A+L + + ++ L+ LD + +SL+G RV ++I+
Sbjct: 189 AKVPLMRFRFSGISVDLTYAQLPVLDAVQAINTSSPQYLRRLDSRSWKSLSGVRVNEQIV 248
Query: 221 RLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCK 280
+LVPN E F++ LR IKLWA++ G++ ++LG G+ A+L A +CQ +PNA A+ L
Sbjct: 249 QLVPNQEKFQILLRCIKLWARRRGLHCHLLGSFAGIHLAILAAYVCQRFPNATANGLFTM 308
Query: 281 FFLVFSQWKWPQPV-LLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVS 339
FF +F+ W W PV L +P N LMPI+ P P + N++
Sbjct: 309 FFGIFAHWPWHIPVDLHGQPTNCR------------HSDGCLMPIVMPCTPPELCASNMT 356
Query: 340 ISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEW 399
T ++EE +G +++D+ + W +FE + T Y +L + + ++E+ +W
Sbjct: 357 EGTFRKIREELMRGYVLTKDLGSHDFEWAWIFEPFPYSTTYGQFLRIALCAPTSEELHDW 416
Query: 400 CGLIESKVRHLIGNLE 415
G ++S+ +LI LE
Sbjct: 417 IGWVKSRFPYLILKLE 432
>gi|215768734|dbj|BAH00963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 546
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 207/387 (53%), Gaps = 17/387 (4%)
Query: 31 MTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSI 90
+ L+ + + D R++ L + V + EE R V+ +L+ +V W K V+
Sbjct: 65 IICGLDPAAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAY 124
Query: 91 AKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTV 149
+ + TFGSY LG + +DIDA+CV P + +F + L+
Sbjct: 125 DQR---EQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEER 181
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
EV+DL ++E A VP+++ F+G+ +D + +L + + + D LL +++ R
Sbjct: 182 PEVSDLHSIENAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAAVNEPSWRC 241
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
L+G RV +I++L+PNI+ F++ LR +KLWA+K G++ ++LG+ G+ A+L A +C ++
Sbjct: 242 LSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMH 301
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPV-LLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
P+A S+L FF +FS W WP PV LL +P W P MPI+ P
Sbjct: 302 PHATLSSLFNSFFDIFSHWHWPLPVSLLDQPTP-------WRPHCC-----SFMPIVMPC 349
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
P + +++ ST ++EE ++G +++ NG W +LF + +Y+H+L ++
Sbjct: 350 SPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVL 409
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLE 415
S+ AE+ +W G ++S+ R+L+ LE
Sbjct: 410 SAPVAEELRDWVGWVKSRFRNLLLKLE 436
>gi|440493736|gb|ELQ76169.1| Poly(A) polymerase, nucleotidyltransferase [Trachipleistophora
hominis]
Length = 696
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 169/291 (58%), Gaps = 30/291 (10%)
Query: 173 IEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLA 232
I+ID++FARL L +I ++L D LLKNLD+K V SLNG RVTDEIL LVPN F A
Sbjct: 325 IKIDLVFARLNLFKIDGSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLVPNKTVFHGA 384
Query: 233 LRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQ 292
LR IK WAK+ + ++ GY GGV++A+ VARICQL+PN T++CK+F ++ +WKWP
Sbjct: 385 LRCIKYWAKRRALTGHLYGYFGGVAYAISVARICQLFPNVCEYTIICKYFELYKEWKWPM 444
Query: 293 PVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQ 352
PV+LKK +N+N VWDP+++ +D++H MP+ITP+YP ST N+ ST +EE ++
Sbjct: 445 PVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIMNSTMKRYKEELER 504
Query: 353 GKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI-----------------------AS 389
+ + G W++ F +FF +YR +L + +
Sbjct: 505 AHKL---LVEGAE-WNEFFRGTDFFQRYRSFLAVFILLKNAGCTTNNDARSEQEITNEQA 560
Query: 390 SVSAEDQLE--WCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIA 438
S + E + W G + S++R L LE ++ A P+ + D G +
Sbjct: 561 SGAKETSMHKMWQGHVNSRIRFLSTKLETVEQLDSAPPFPQTF-DMCGFLG 610
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T L+L +Q D+ RT L L + +TDEE R VL +L+ + +IK +
Sbjct: 9 HGITGPLSLKESSQDDIARTSSLHAFLVSSKIYDTDEEAIIRERVLGRLSYMFDNFIKAI 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
K + + G+IYTFGSYRLGVH +G+DID LCVAP +VDR ++F F+ L
Sbjct: 69 GTKKGLADSDIRTATGRIYTFGSYRLGVHARGSDIDTLCVAPVYVDRKEFFEEFYVMLND 128
Query: 149 VDEVTDLRAVEEAFVPVIKMNF 170
V ++ VE+A+VP++++ +
Sbjct: 129 V--FAEVEKVEDAYVPLMQLVY 148
>gi|351712642|gb|EHB15561.1| Poly(A) polymerase gamma [Heterocephalus glaber]
Length = 528
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/148 (62%), Positives = 121/148 (81%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 69 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 128
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 129 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 188
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEID 176
D + +LRAVE+AFVPVIK FDGIE++
Sbjct: 189 QDGIRNLRAVEDAFVPVIKFEFDGIEVN 216
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 37/40 (92%)
Query: 313 VNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQ 352
VN +DRYHLMPIITPAYPQQNST+NVS STRT+M EEFKQ
Sbjct: 215 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQ 254
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 483 NLTYDIQHFTNAV--------HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDK 534
N TY++ T V + QA M+K+GMKIE HVKKKQL +YLPA +L+K K
Sbjct: 235 NSTYNVSTSTRTVMVEEFKQVYRQANNINMLKEGMKIEATHVKKKQLHQYLPAEILQKKK 294
Query: 535 KTKSGDQNTSA 545
K D + S+
Sbjct: 295 KQSLSDVSRSS 305
>gi|24059888|dbj|BAC21354.1| poly(A) polymerase-like protein [Oryza sativa Japonica Group]
Length = 472
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 211/425 (49%), Gaps = 49/425 (11%)
Query: 35 LNLSPP--NQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAK 92
L+L P Q+D +RT L + E D++ R +V+ KLN +V +W K V+ +
Sbjct: 6 LHLHPAFLAQMDSRRTTSLLQDEGGIPSPEADKK---REQVIRKLNKIVMDWAKVVAYEQ 62
Query: 93 NIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTVDE 151
+PP + + T+GSY LG H +DIDALCV P + +F + L+ E
Sbjct: 63 RVPP---RRATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPE 119
Query: 152 VTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLN 211
V++L+ VE A VP+++ F GI +D +A+L + + LL+ LD RSL+
Sbjct: 120 VSELQTVESAKVPLMRFRFSGISVDFTYAQLP------AIITSNPHLLQKLDSLSWRSLS 173
Query: 212 GCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPN 271
G RV ++I++LVPN + F++ LR IKLWAK+ GI+ ++LG+ G+ A+L A +CQ YP
Sbjct: 174 GVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPY 233
Query: 272 AAASTLVCKFFLVFSQWKWPQPVLL-------KKPDNVNLGFPVWDPRVNVADRYHLMPI 324
+ L FF +F+ W W PV L ++PD MPI
Sbjct: 234 GTINGLFTIFFDIFAHWNWQIPVSLHGQPTNCRRPDG------------------SFMPI 275
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL 384
+ P P + T N++ T ++EE +G ++++ + W LF + TKY +L
Sbjct: 276 LLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFL 335
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSP 444
+ + ++E+ +W G ++S+ N + L + EC D+T + + P
Sbjct: 336 RIALCAPTSEELRDWAGWVKSRF---------NLILKLESIGVECDPDSTEEVDHTVFEP 386
Query: 445 EITAE 449
I
Sbjct: 387 SIVCH 391
>gi|440789895|gb|ELR11186.1| Poly(A) polymerase central domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1230
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 203/388 (52%), Gaps = 36/388 (9%)
Query: 54 CLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYR 113
L Y V+ +L + + LV + KEV I KN V +V ++ GS +
Sbjct: 730 ALYRYLVANKSYDLDQQRKQRQAAVRLVSQACKEV-IEKNYNGQVNCEV---LHLLGSCQ 785
Query: 114 LGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGI 173
+GV +D+DALCV P + + +F L+ ++ R V +A VPV+K+ +G+
Sbjct: 786 MGVQTADSDVDALCVGPDTMSCSRFFMELRVALEKTKKLQSAREVHDAKVPVLKLQINGV 845
Query: 174 EIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLAL 233
E+D+L+ DD L+ + +RS++GCR D ILR VPN+ +F+ L
Sbjct: 846 EVDLLYGPYPSSVPITPPSQIDDRSLRKFEPAVLRSISGCRDGDAILRSVPNVSHFQTVL 905
Query: 234 RTIKLWAKKHGIYSNVLGYLGGVSWAMLVARIC---QLYPNAAAST-----------LVC 279
R +KLWAK+ G+YSN +G+LGG SW++LVA +C +LY +AA+ L+
Sbjct: 906 RAVKLWAKRRGLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDLSIEERLLA 965
Query: 280 KFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVS 339
+FF V++ W W QPV + P + R + MPI+TP P NS NV+
Sbjct: 966 EFFEVYNHWDWQQPVAI-TPGSA---------RYKPGHKSDKMPIVTPTPPFNNSARNVA 1015
Query: 340 ISTRTIMQEEFKQGKTISE-DIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE 398
ST T MQ+EF + I++ +N + + L + NFF Y +YL++ S+S+++ +
Sbjct: 1016 RSTLTEMQQEFFRAFDITQASQWNSEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDEVTK 1075
Query: 399 W-------CGLIESKVRHLIGNLERNPH 419
W G +ES++ LI +LE+NP
Sbjct: 1076 WPTNFSLSLGWLESRLIALIFDLEKNPQ 1103
>gi|440294386|gb|ELP87403.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 482
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 251/497 (50%), Gaps = 24/497 (4%)
Query: 48 TRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIY 107
T EL L+ + T EE R + +S LN +V++W K++ I+K + KI+
Sbjct: 2 TDELRGYLEKNGMYPTPEEKKEREKAISYLNEVVEKWGKKIYISKTGTSENTDVCAAKIF 61
Query: 108 TFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIK 167
T+GSYRL V+ ADIDA V ++R D+F+ +E LK +V ++R ++ P++
Sbjct: 62 TYGSYRLDVYGNNADIDACVVTNSTIEREDFFNDLYEDLKNNPDVREIRQIKSVRAPILT 121
Query: 168 MNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVP--N 225
M + I+ID+ FAR A +P +MD+ + +L +D+ R++NG R TD I VP +
Sbjct: 122 MTYMKIDIDLNFARTAHTTLPKEMDILSERILDEMDELSTRAINGRRNTDMINNFVPPHS 181
Query: 226 IENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVF 285
+E F++ +R IK+W+KK GIY V YL G+S +LVA++ L+ KFF +
Sbjct: 182 VEAFKVIVRAIKMWSKKRGIYGYVYSYLNGISIEILVAQVISENYQLDNVRLLEKFFHAY 241
Query: 286 SQWKWPQ-PVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRT 344
+ W W + PV+L D+ P + ++ +ITPA P++NS +N++ S+
Sbjct: 242 ATWDWARNPVMLGVSDD--------RPE---RKKEEMVQVITPAAPRENSMYNMTRSSLE 290
Query: 345 IMQEEFKQGKTISEDIYN-GKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLI 403
+++ E +G+ I + + G W+ LF+ + F Y + V + S E G+
Sbjct: 291 LLKREMLRGERIVKGYKSEGGNDWNLLFKKRHCFCGY-YIFVEFSVRGSLESLENKIGMF 349
Query: 404 ESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVS 463
ESK+ + +LE + +V PE Y + + N + K++ + S P++
Sbjct: 350 ESKIVRFVRSLEEMEEVIEVNVIPEGYLE----VENAVDYYYVGMNVKKDLLVDVSAPLN 405
Query: 464 GVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSE 523
G +F+ +I + + H ++++ ++ +E R VK +++S+
Sbjct: 406 AFLEDVNKGKEFVVDALIKKRS---EISVKCTHKALSKTERVELQKVVEERKVKLQEMSK 462
Query: 524 YLPAHMLKKDKKTKSGD 540
++ KDK+ GD
Sbjct: 463 E-QIDIITKDKEEVVGD 478
>gi|297722067|ref|NP_001173397.1| Os03g0313200 [Oryza sativa Japonica Group]
gi|255674459|dbj|BAH92125.1| Os03g0313200 [Oryza sativa Japonica Group]
Length = 431
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 179/314 (57%), Gaps = 14/314 (4%)
Query: 104 GKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTVDEVTDLRAVEEAF 162
+ TFGSY LG + +DIDA+CV P + +F + L+ EV+DL ++E A
Sbjct: 20 ATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENAK 79
Query: 163 VPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRL 222
VP+++ F+G+ +D + +L + + + D LL +++ R L+G RV +I++L
Sbjct: 80 VPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAAVNEPSWRCLSGVRVNRQIMQL 139
Query: 223 VPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFF 282
+PNI+ F++ LR +KLWA+K G++ ++LG+ G+ A+L A +C ++P+A S+L FF
Sbjct: 140 LPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSFF 199
Query: 283 LVFSQWKWPQPV-LLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSIS 341
+FS W WP PV LL +P W P MPI+ P P + +++ S
Sbjct: 200 DIFSHWHWPLPVSLLDQPTP-------WRPHCC-----SFMPIVMPCSPPEFCASSITRS 247
Query: 342 TRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCG 401
T ++EE ++G +++ NG W +LF + +Y+H+L ++ S+ AE+ +W G
Sbjct: 248 TFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVG 307
Query: 402 LIESKVRHLIGNLE 415
++S+ R+L+ LE
Sbjct: 308 WVKSRFRNLLLKLE 321
>gi|58220771|gb|AAW68017.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 431
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 179/314 (57%), Gaps = 14/314 (4%)
Query: 104 GKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTVDEVTDLRAVEEAF 162
+ TFGSY LG + +DIDA+CV P + +F + L+ EV+DL ++E A
Sbjct: 20 ATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENAK 79
Query: 163 VPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRL 222
VP+++ F+G+ +D + +L + + + D LL +++ R L+G RV +I++L
Sbjct: 80 VPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAVVNEPSWRCLSGVRVNRQIMQL 139
Query: 223 VPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFF 282
+PNI+ F++ LR +KLWA+K G++ ++LG+ G+ A+L A +C ++P+A S+L FF
Sbjct: 140 LPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSFF 199
Query: 283 LVFSQWKWPQPV-LLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSIS 341
+FS W WP PV LL +P W P MPI+ P P + +++ S
Sbjct: 200 DIFSHWHWPLPVSLLDQPTP-------WRPHCC-----SFMPIVMPCSPPEFCASSITRS 247
Query: 342 TRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCG 401
T ++EE ++G +++ NG W +LF + +Y+H+L ++ S+ AE+ +W G
Sbjct: 248 TFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVG 307
Query: 402 LIESKVRHLIGNLE 415
++S+ R+L+ LE
Sbjct: 308 WVKSRFRNLLLKLE 321
>gi|414888171|tpg|DAA64185.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 545
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 196/385 (50%), Gaps = 24/385 (6%)
Query: 42 QLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEK 101
++D +R+ L + LK + E+ + R +V+ +L +V W V+ +++P +A
Sbjct: 76 EVDHRRSSSLVQFLKDEGAVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQGLAT- 134
Query: 102 VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTVDEVTDLRAVEE 160
+ T+GSY LG H +DID LC+ P + +F + L+ EV+++ VE+
Sbjct: 135 --ATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEK 192
Query: 161 AFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEIL 220
A VP+++ F GI +D+ +A+L + + ++ LL+ +D + RSL+G RV ++I+
Sbjct: 193 AKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIV 252
Query: 221 RLVPNIE---------NFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPN 271
+LVPN E F+ LR IKLWA+K G++ + LG+ G+ A+L A +C+ +P+
Sbjct: 253 QLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPD 312
Query: 272 AAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQ 331
A+ S L FF F+ W W PV L L LMPI+ P P
Sbjct: 313 ASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCL-----------HSEGRLMPIVMPCTPP 361
Query: 332 QNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSV 391
+ V+ + ++EE +G ++ D W LFE + KY+ +L + +
Sbjct: 362 EFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFLRIALRAP 421
Query: 392 SAEDQLEWCGLIESKVRHLIGNLER 416
+ + +W G ++S+ R LI LER
Sbjct: 422 TIAELGDWAGWVKSRFRFLILKLER 446
>gi|413955904|gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 508
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 211/398 (53%), Gaps = 14/398 (3%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G P + A + + AL +D R+R L + + + + E+ R V+ +L
Sbjct: 44 GPPTTGALLPLPIPVALPHEVIMYMDECRSRSLLKFISNAGIEPSLEDERRRERVVRELG 103
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RAD 137
+V +W + V+ + + + TFGSY LG + +DID LC+ P +
Sbjct: 104 KIVMDWARRVAYEQGKQHWITS---ATVLTFGSYALGAYGPESDIDVLCIGPYIASLQHH 160
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F + L+ EV++L ++E A VP+++ F+GI +D + +L + + M D
Sbjct: 161 FFVVLRQMLEGRPEVSELHSIEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPH 220
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+L+N+D R L+G R +I++LVPN++ F+ LR +KLWA+K G+ ++LG+ G+
Sbjct: 221 VLENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIH 280
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
A+L A +C+ +PNA+ +TL+ FF +F W WP PV L P V G P D
Sbjct: 281 LAILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLPVSLLDPP-VLCGGP---------D 330
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
LMPI+ P P + + + + ST + ++EE ++G +S+D + + W LF +
Sbjct: 331 GCSLMPIMLPCIPPEFCSSSTTESTFSKIKEELRRGYALSKDTRSTDSDWSWLFAPFPYG 390
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
+Y+ +L ++ S+ ++ +W G ++S+ R+L+ LE
Sbjct: 391 ARYKCFLRIVLSAPMEDELRDWVGWVKSRFRNLLLKLE 428
>gi|226492962|ref|NP_001152292.1| LOC100285931 [Zea mays]
gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 202/374 (54%), Gaps = 14/374 (3%)
Query: 43 LDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKV 102
+D R+R L + + + + E+ R V+ +L +V +W K V+ + +A
Sbjct: 68 MDECRSRSLLKFISDAGIVPSLEDERRRERVVRELGKIVMDWAKRVAYEQGNWHWIAS-- 125
Query: 103 GGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTVDEVTDLRAVEEA 161
+ TFGSY LG + +DID LC+ P + +F + L+ EV++L ++E A
Sbjct: 126 -ATVLTFGSYALGAYGPESDIDVLCIGPCIASLQHHFFVVLRQMLEGRPEVSELHSIEGA 184
Query: 162 FVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILR 221
VP+++ F+GI +D + +L + + M D +L+N+D R L+G R +I++
Sbjct: 185 KVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQ 244
Query: 222 LVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKF 281
LVPN++ F+ LR +KLWA+K G++ ++LG+ G+ A+L A +C+ +PNA+ +TL+ F
Sbjct: 245 LVPNMKKFQYLLRCLKLWARKRGLHCHLLGFFAGIHLAILAAYVCRRHPNASINTLLSLF 304
Query: 282 FLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSIS 341
F +F W WP PV L P P P D LMPI+ P P + + + + S
Sbjct: 305 FDIFVHWPWPLPVSLLDPP-----VPCRGP-----DGCSLMPIMLPCIPPEFCSSSTTES 354
Query: 342 TRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCG 401
T + ++EE +G +S+D + W LF + +Y+ +L ++ S+ E+ +W G
Sbjct: 355 TFSKIKEELWRGYALSKDTRSTDFNWSWLFAPFPYGARYKCFLRIVLSAPMGEELRDWVG 414
Query: 402 LIESKVRHLIGNLE 415
++S+ R+L+ LE
Sbjct: 415 WVKSRFRNLLLKLE 428
>gi|145546083|ref|XP_001458725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426546|emb|CAK91328.1| unnamed protein product [Paramecium tetraurelia]
Length = 550
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 155/516 (30%), Positives = 251/516 (48%), Gaps = 57/516 (11%)
Query: 50 ELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTF 109
+L ++ ++ +E ++ + L +VK W ++ + K I + + +
Sbjct: 49 QLLSFIETDSLQAIEENQQKSKDIQAYLGQIVKRWSQQCAKEKRINEDHLKYCSAVLLPY 108
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRAD-YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKM 168
GS LGV +DID +C+AP +DR + +F+ F L + + +E P+IKM
Sbjct: 109 GSVLLGVADSKSDIDLICIAPEFIDRREQFFNGLFYLLSNEQGMEQINKIESTSNPIIKM 168
Query: 169 NFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQ---KCVRSLNGCRVTDEILRLVPN 225
+ G ID+ FA+L +P+++D D L +NL Q K + +LNG + I + +P+
Sbjct: 169 IYKGFHIDINFAQLNSDRVPENIDDNLDELRRNLLQSEDKSMYALNGRKNGILISKSMPD 228
Query: 226 IENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVF 285
F ALR IK WAKK + SN++GYLGG+SWA+L+A+ICQL+P V FF ++
Sbjct: 229 HSQFVQALRIIKQWAKKRKVSSNIIGYLGGISWAILMAKICQLFPRVDLCQTVSLFFQIY 288
Query: 286 SQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYH--LMPIITPAYPQQNSTFNV-SIST 342
SQW W PV++ + + + + + D D+ + +M IITPAYP N+TF V I+
Sbjct: 289 SQWNWKVPVVIDESEQEIICYYLQDE-----DKRNDKIMQIITPAYPFFNTTFKVHKITF 343
Query: 343 RTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGL 402
+TI Q EF+ G D W+++ +FF +++++ L S ++E+ +W G
Sbjct: 344 QTIFQ-EFQIGAQKLGD-------WNEVLRPFDFFDCFQYFVALSIVSKTSENFHKWTGF 395
Query: 403 IES---KVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTS 459
E+ K+ L+GN N E Y DT S IT EG+E + +
Sbjct: 396 CEAQLPKLLKLVGN------------NEEVY-DTK------SFELRITPEGEENLERDHA 436
Query: 460 PPVSGVASMWFIGLDFIAANVI-LNLTYDIQHFTNAVHWQATQSKMMKD--GMKIEVRHV 516
++ +F+G+ + L L I F ++ + QS +D MKI V +V
Sbjct: 437 KSLT-----YFLGIKKLKQEAWPLFLRLPITQFAIELNQRKLQSFKNEDEFNMKIYVANV 491
Query: 517 KK-KQLSEYLPAHMLK------KDKKTKSGDQNTSA 545
QL L M K KT D+N SA
Sbjct: 492 TDIDQLRGKLSPKMFDDSDSIVKKIKTNVEDKNGSA 527
>gi|407036560|gb|EKE38225.1| poly(A) polymerase, putative [Entamoeba nuttalli P19]
Length = 522
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 229/462 (49%), Gaps = 19/462 (4%)
Query: 50 ELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTF 109
EL E L ++ +++ + + +SK+ +++W K++ I + IY +
Sbjct: 4 ELKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVKAATIYVY 63
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMN 169
GSYRL V+ +DIDA V+ + R D++ + +L +V +L+ + P + M
Sbjct: 64 GSYRLNVYGNNSDIDACIVSNSTITRDDFYDGLYAELLNNPDVKELKQIPSKRSPHLSMI 123
Query: 170 FDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPN--IE 227
+ IE D+ F+R A +PD++D+ ++ +LKN+D+ R++NG R TD I VPN E
Sbjct: 124 YLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHSEE 183
Query: 228 NFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQ 287
FR+ +RTIKLW KK GIY V +L G+S +LVA++ L+ KFF V+S
Sbjct: 184 AFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVYSS 243
Query: 288 WKWPQ-PVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIM 346
W W + PV+L D+ N D + + ++ I+TPA P +N+ F+++ + ++
Sbjct: 244 WDWLRTPVMLGTNDDFN------DKK-----KEGIIQILTPASPSENAAFSITKFSLEMI 292
Query: 347 QEEFKQGKTISEDIYN-GKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIES 405
+ E K+G+ I + + G W KLF+ + F Y ++ I +S S E G ES
Sbjct: 293 KRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFES 352
Query: 406 KVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGV 465
+ +L+ L I A+V P + D N + K + + S P++
Sbjct: 353 GLVNLMKGLSEIEEIIEANVIPNGFLDE----ENERYFYYVGMNVKRDCPVDISTPLNSF 408
Query: 466 ASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKD 507
S+ G D I I + F +AV T+S+ +K+
Sbjct: 409 LSIVNSGKDLIVDASIKKRSEIPTKFAHAVKRSITKSQEIKE 450
>gi|62088188|dbj|BAD92541.1| poly(A) polymerase gamma variant [Homo sapiens]
Length = 382
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/257 (43%), Positives = 148/257 (57%), Gaps = 31/257 (12%)
Query: 343 RTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGL 402
RT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL AS+ + E+ LEW GL
Sbjct: 1 RTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60
Query: 403 IESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPV 462
+ESK+R L+GNLERN I LAHVNP+ + KE +N
Sbjct: 61 VESKIRVLVGNLERNEFITLAHVNPQSFPG-----------------NKEHHKDN----- 98
Query: 463 SGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKK 518
SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M+K+GMKIE HVKK
Sbjct: 99 -NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKK 157
Query: 519 KQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLSDKVNN 578
KQL YLPA +L+K KK D N S+ +S + + R D+D+ + N+
Sbjct: 158 KQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSR-DTDNGT---PFNS 213
Query: 579 ISNNGDQSSSECTEDNS 595
++ D S TE NS
Sbjct: 214 PASKSDSPSVGETERNS 230
>gi|67481711|ref|XP_656205.1| poly(A) polymerase [Entamoeba histolytica HM-1:IMSS]
gi|74890661|sp|Q51D88.1|PAP_ENTHI RecName: Full=Poly(A) polymerase; Short=PAP; AltName: Full=EhPAP;
AltName: Full=Polynucleotide adenylyltransferase
gi|56473392|gb|EAL50821.1| poly(A) polymerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709651|gb|EMD48877.1| poly(A) polymerase, putative [Entamoeba histolytica KU27]
Length = 522
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 229/462 (49%), Gaps = 19/462 (4%)
Query: 50 ELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTF 109
EL E L ++ +++ + + +SK+ +++W K++ I + IY +
Sbjct: 4 ELKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVKAATIYVY 63
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMN 169
GSYRL V+ +DIDA V+ + R D++ + +L +V +L+ + P + M
Sbjct: 64 GSYRLNVYGNNSDIDACIVSNSTITRDDFYDGLYAELLNNPDVKELKQIPSKRSPHLSMI 123
Query: 170 FDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPN--IE 227
+ IE D+ F+R A +PD++D+ ++ +LKN+D+ R++NG R TD I VPN E
Sbjct: 124 YLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHSEE 183
Query: 228 NFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQ 287
FR+ +RTIKLW KK GIY V +L G+S +LVA++ L+ KFF V+S
Sbjct: 184 AFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVYSS 243
Query: 288 WKWPQ-PVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIM 346
W W + PV+L D+ N D + + ++ I+TPA P +N+ F+++ + ++
Sbjct: 244 WDWLRTPVMLGTNDDFN------DKK-----KEGVIQILTPASPSENAAFSITKFSLEMI 292
Query: 347 QEEFKQGKTISEDIYN-GKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIES 405
+ E K+G+ I + + G W KLF+ + F Y ++ I +S S E G ES
Sbjct: 293 KRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFES 352
Query: 406 KVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGV 465
+ +L+ L I A+V P + D N + K + + S P++
Sbjct: 353 GLVNLMKGLSEIEEIIEANVIPNGFLDE----ENEKYFYYVGMNVKRDCPVDISTPLNSF 408
Query: 466 ASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKD 507
S+ G D I I + F ++V T+S+ +K+
Sbjct: 409 LSIVNSGKDLIVDASIKKRSEIPTKFAHSVKRSITKSQEIKE 450
>gi|167393770|ref|XP_001740701.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165895071|gb|EDR22875.1| poly(A) polymerase [Entamoeba dispar SAW760]
Length = 521
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 202/387 (52%), Gaps = 15/387 (3%)
Query: 50 ELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTF 109
EL E L ++ +++ + + +SK+ +++W K++ I + IY +
Sbjct: 4 ELKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVRAATIYVY 63
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMN 169
GSYRL V+ +DIDA V+ + R D++ + +L +V +L+ + P + M
Sbjct: 64 GSYRLNVYGNNSDIDACIVSNSTITRDDFYDGLYAELLNNPDVKELKQIPSKRSPHLSMI 123
Query: 170 FDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPN--IE 227
+ IE D+ F+R A +PD++D+ ++ +LKN+D+ R++NG R TD I VPN E
Sbjct: 124 YLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHSEE 183
Query: 228 NFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQ 287
FR+ +RTIKLW KK GIY V +L G+S +LVA++ L+ KFF V+S
Sbjct: 184 AFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVYSS 243
Query: 288 WKWPQ-PVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIM 346
W W + PV+L D+ N D + + ++ I+TPA P +N+ F+++ + ++
Sbjct: 244 WDWLRAPVMLGTNDDFN------DKK-----KEGVIQILTPASPSENAAFSITKFSLELI 292
Query: 347 QEEFKQGKTISEDIYN-GKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIES 405
+ E K+G+ I + + G W KLF+ + F Y ++ I +S S E G ES
Sbjct: 293 KRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFES 352
Query: 406 KVRHLIGNLERNPHINLAHVNPECYTD 432
+ +L+ L I A+V P + D
Sbjct: 353 GLVNLMKGLSEIEEIVEANVIPNGFLD 379
>gi|218200293|gb|EEC82720.1| hypothetical protein OsI_27407 [Oryza sativa Indica Group]
Length = 455
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 202/425 (47%), Gaps = 66/425 (15%)
Query: 35 LNLSPP--NQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAK 92
L+L P Q+D +RT L + LK + E R +V+ KLN +V +W K V+ +
Sbjct: 6 LHLHPAFLAQMDSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQ 65
Query: 93 NIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTVDE 151
+PP + + T+GSY LG H +DIDALCV P + +F + L+ E
Sbjct: 66 RVPP---RRATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPE 122
Query: 152 VTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLN 211
V++L+ VE A +I N LL+ LD + RSL+
Sbjct: 123 VSELQTVESAKA-IITSN--------------------------PHLLQKLDSRSWRSLS 155
Query: 212 GCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPN 271
G RV ++I++LVPN + F++ LR IKLWAK+ GI+ ++LG+ G+ A+L A +CQ YP
Sbjct: 156 GVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPY 215
Query: 272 AAASTLVCKFFLVFSQWKWPQPVLL-------KKPDNVNLGFPVWDPRVNVADRYHLMPI 324
+ L FF +F+ W W PV L ++PD MPI
Sbjct: 216 GTINGLFTIFFDIFAHWNWQIPVSLHGQPTNCRRPDG------------------SFMPI 257
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL 384
+ P P + T N++ T ++EE +G ++++ + W LF + TKY +L
Sbjct: 258 LLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFL 317
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSP 444
+ + ++E+ +W G ++S+ R+LI LE + EC D+T + + P
Sbjct: 318 RIALCAPTSEELRDWAGWVKSRFRNLILKLES--------IGVECDPDSTEEVDHTVFEP 369
Query: 445 EITAE 449
I
Sbjct: 370 SIVCH 374
>gi|294943027|ref|XP_002783739.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239896395|gb|EER15535.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 274
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 158/273 (57%), Gaps = 21/273 (7%)
Query: 133 VDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMD 192
V R +F F KL +++VT+L V +A VPVIKM F G+++D+L+ LA +D
Sbjct: 1 VTRDAFFELFPLKLSELNDVTNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGPAID 60
Query: 193 LRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGY 252
DD LL +D+K RS+NG RV+D I VP+ +F ALR I+ WA++ GIYSN LGY
Sbjct: 61 PADDNLLCGMDEKSARSINGVRVSDAIKTCVPHFAHFLGALRVIRAWARRRGIYSNALGY 120
Query: 253 LGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKW---PQPVLLKKPDNVN-LGF-- 306
LGGVSWA+LVAR+CQL+PN S LV +FF V+S+W W V+L+ + N GF
Sbjct: 121 LGGVSWAILVARVCQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQH 180
Query: 307 -PVWDP---RVNVADRYHL----MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTI-- 356
VW P R L M +ITPAYP NSTF V+ + +++E ++G I
Sbjct: 181 HKVWCPPPKRTTTDQPLPLAASPMAVITPAYPSMNSTFGVTRMSMDTIKKELERGAGIIS 240
Query: 357 SEDI-YNGKTMWDKLFETPNFF----TKYRHYL 384
S+ + + W+ L E +FF Y+ +L
Sbjct: 241 SKGVDLRSRECWETLLEPIHFFDYDQGGYKQFL 273
>gi|145551783|ref|XP_001461568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429403|emb|CAK94195.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 187/350 (53%), Gaps = 17/350 (4%)
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD-Y 138
+VK+W ++ + K I + + +GS LGV +DID +C+AP +DR + +
Sbjct: 55 IVKKWSQQCAKEKRINEDHLKYCSAVLLPYGSVLLGVADSKSDIDLICIAPEFIDRREQF 114
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDML 198
F+ F L + + +E P+IKM + G ID+ FA+L +P+++D D L
Sbjct: 115 FNGLFYLLSNEQGMEQINKIESTSNPIIKMIYKGFHIDINFAQLNSDRVPENIDDNLDEL 174
Query: 199 LKNLDQ---KCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGG 255
+NL Q K + +LNG + I + +P+ F ALR IK WAKK + SN++GYLGG
Sbjct: 175 RRNLLQSEDKSLYALNGRKNGILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGYLGG 234
Query: 256 VSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
+SWA+L+A+ICQL+P V FF ++SQW W PV++ + + + +
Sbjct: 235 ISWAILMAKICQLFPRVDVCQTVSLFFQIYSQWNWKIPVVIDESEQDFIQIETFKTLCWK 294
Query: 316 ADR----YHLMPIITPAYPQQNSTFNVS-ISTRTIMQEEFKQGKTISEDIYNGKTMWDKL 370
D +M IITPAYP N+TF V+ I+ +TI Q EF+ G D W+++
Sbjct: 295 RDEDKRNDKIMQIITPAYPFFNTTFKVNKITFQTIFQ-EFQIGAQKLGD-------WNEV 346
Query: 371 FETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHI 420
+FF +++++ + S S+E+ +W G E+++ L+ + N I
Sbjct: 347 LRPLDFFDCFQYFVAISIVSKSSENFHKWTGFCEAQLPKLLKLIGHNEAI 396
>gi|384485719|gb|EIE77899.1| hypothetical protein RO3G_02603 [Rhizopus delemar RA 99-880]
Length = 494
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 203/385 (52%), Gaps = 37/385 (9%)
Query: 55 LKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGK---IYTFGS 111
L+ YN+ ET+EE R V+ L +++ V+ + + + K G + FGS
Sbjct: 17 LERYNIIETEEEKIKRKNVIDLLQHIL------VNFQRAVTKDLDWKRGDIECFLSPFGS 70
Query: 112 YRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFD 171
Y LG + + ADID + V P V R +F F + LK V+++ ++++A VP+IK D
Sbjct: 71 YALGGYIRDADIDLVLVCPIQVLRKYFFKFFPQLLKQQTLVSNVESIQKANVPIIKCTID 130
Query: 172 GIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVT----DEILRLVPNIE 227
I ID+ F RL ++ + +++ DD LLK++D+ C+ S++G RV ++I R ++
Sbjct: 131 NISIDISFVRLKVERVAQNINFLDDSLLKDIDETCLASMDGPRVNQFCKNQIYR--QHVR 188
Query: 228 NFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNA---AASTLVCKFFLV 284
F++ L+ IK WA + GIYS +GYL G SW +L+ + N + + ++ +FF +
Sbjct: 189 LFQVCLQCIKHWATQRGIYSKPIGYLNGSSWTLLLVKAYMSIKNKELLSVTMILSRFFSM 248
Query: 285 FSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYH---------LMPIITPAYPQQNST 335
+SQW W PV+L + P +N + +MPI++P +P N
Sbjct: 249 WSQWPWQMPVMLTD----------YIPGINGTKIEYNSLAEFDNAVMPIVSPCHPVCNVA 298
Query: 336 FNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAED 395
V+ STR IMQ EF++G T+ + + DKLF N+ +Y+H++ ++ SS +
Sbjct: 299 PYVTKSTRRIMQIEFERGWTLLNKNAHPFAIIDKLFNPVNYTQRYKHFINIVTSSTTITS 358
Query: 396 QLEWCGLIESKVRHLIGNLERNPHI 420
W + +++ + +E +P+I
Sbjct: 359 HDTWVRKMATQIPRYLELIESDPNI 383
>gi|6473835|dbj|BAA87187.1| PolyA polymerase [Schizosaccharomyces pombe]
Length = 204
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 116/169 (68%)
Query: 256 VSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
V+WAM+VARICQLYPNA +S +V KFF + QW WPQP+LLK ++ L +W+P++
Sbjct: 1 VAWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYP 60
Query: 316 ADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPN 375
+D+ H MPIITPAYP +T N+++ST+TI+ E + I++ I W LF+ +
Sbjct: 61 SDKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHD 120
Query: 376 FFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
FF +Y+HYL + A++ +AE QL+W GL+ESK+RHL+ LE I LAH
Sbjct: 121 FFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLELVDAIALAH 169
>gi|222637720|gb|EEE67852.1| hypothetical protein OsJ_25654 [Oryza sativa Japonica Group]
Length = 454
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 197/425 (46%), Gaps = 67/425 (15%)
Query: 35 LNLSPP--NQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAK 92
L+L P Q+D +RT L + LK + E R +V+ KLN +V +W K V+ +
Sbjct: 6 LHLHPAFLAQMDSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQ 65
Query: 93 NIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTVDE 151
+PP + + T+GSY LG H +DIDALCV P + +F + L+ E
Sbjct: 66 RVPP---RRATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPE 122
Query: 152 VTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLN 211
V++L+ VE A + + LL+ LD RSL+
Sbjct: 123 VSELQTVESA---------------------------KAIITSNPHLLQKLDSLSWRSLS 155
Query: 212 GCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPN 271
G RV ++I++LVPN + F++ LR IKLWAK+ GI+ ++LG+ G+ A+L A +CQ YP
Sbjct: 156 GVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPY 215
Query: 272 AAASTLVCKFFLVFSQWKWPQPVLL-------KKPDNVNLGFPVWDPRVNVADRYHLMPI 324
+ L FF +F+ W W PV L ++PD MPI
Sbjct: 216 GTINGLFTIFFDIFAHWNWQIPVSLHGQPTNCRRPDG------------------SFMPI 257
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL 384
+ P P + T N++ T ++EE +G ++++ + W LF + TKY +L
Sbjct: 258 LLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFL 317
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSP 444
+ + ++E+ +W G ++S+ N + L + EC D+T + + P
Sbjct: 318 RIALCAPTSEELRDWAGWVKSRF---------NLILKLESIGVECDPDSTEEVDHTVFEP 368
Query: 445 EITAE 449
I
Sbjct: 369 SIVCH 373
>gi|414888168|tpg|DAA64182.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 430
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 174/344 (50%), Gaps = 24/344 (6%)
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSS 141
W V+ +++P +A + T+GSY LG H +DID LC+ P + +F
Sbjct: 2 HWANAVAYEQSVPQGLAT---ATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVV 58
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
+ L+ EV+++ VE+A VP+++ F GI +D+ +A+L + + ++ LL+
Sbjct: 59 LRQILQGRPEVSEVHTVEKAKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQK 118
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIE---------NFRLALRTIKLWAKKHGIYSNVLGY 252
+D + RSL+G RV ++I++LVPN E F+ LR IKLWA+K G++ + LG+
Sbjct: 119 IDTRSWRSLSGVRVNEQIVQLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGF 178
Query: 253 LGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPR 312
G+ A+L A +C+ +P+A+ S L FF F+ W W PV L L
Sbjct: 179 FAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCL-------- 230
Query: 313 VNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFE 372
LMPI+ P P + V+ + ++EE +G ++ D W LFE
Sbjct: 231 ---HSEGRLMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFE 287
Query: 373 TPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLER 416
+ KY+ +L + + + + +W G ++S+ R LI LER
Sbjct: 288 PFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER 331
>gi|226498102|ref|NP_001142239.1| uncharacterized protein LOC100274408 [Zea mays]
gi|194707762|gb|ACF87965.1| unknown [Zea mays]
Length = 430
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 174/344 (50%), Gaps = 24/344 (6%)
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSS 141
W V+ +++P +A + T+GSY LG H +DID LC+ P + +F
Sbjct: 2 HWANAVAYEQSVPQGLAT---ATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVV 58
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
+ L+ EV+++ VE+A VP+++ F GI +D+ +A+L + + ++ LL+
Sbjct: 59 LRQILQGRPEVSEVHTVEKAKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQK 118
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIE---------NFRLALRTIKLWAKKHGIYSNVLGY 252
+D + RSL+G RV ++I++LVPN E F+ LR IKLWA+K G++ + LG+
Sbjct: 119 IDTRSWRSLSGVRVNEQIVQLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGF 178
Query: 253 LGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPR 312
G+ A+L A +C+ +P+A+ S L FF F+ W W PV L L
Sbjct: 179 FAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCL-------- 230
Query: 313 VNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFE 372
LMPI+ P P + V+ + ++EE +G ++ D W LFE
Sbjct: 231 ---HSEGRLMPIVMPCTPLEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFE 287
Query: 373 TPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLER 416
+ KY+ +L + + + + +W G ++S+ R LI LER
Sbjct: 288 PFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER 331
>gi|222624807|gb|EEE58939.1| hypothetical protein OsJ_10608 [Oryza sativa Japonica Group]
Length = 519
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 191/387 (49%), Gaps = 44/387 (11%)
Query: 31 MTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSI 90
+ L+ + + D R++ L + V + EE R V+ +L+ +V W K V+
Sbjct: 65 IICGLDPAAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAY 124
Query: 91 AKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTV 149
+ + TFGSY LG + +DIDA+CV P + +F + L+
Sbjct: 125 DQR---EQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEER 181
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
EV+DL ++E A + D LL +++ R
Sbjct: 182 PEVSDLHSIENA---------------------------KAIHAFDPRLLAAVNEPSWRC 214
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
L+G RV +I++L+PNI+ F++ LR +KLWA+K G++ ++LG+ G+ A+L A +C ++
Sbjct: 215 LSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMH 274
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPV-LLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
P+A S+L FF +FS W WP PV LL +P W P MPI+ P
Sbjct: 275 PHATLSSLFNSFFDIFSHWHWPLPVSLLDQPTP-------WRPHCC-----SFMPIVMPC 322
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
P + +++ ST ++EE ++G +++ NG W +LF + +Y+H+L ++
Sbjct: 323 SPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVL 382
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLE 415
S+ AE+ +W G ++S+ R+L+ LE
Sbjct: 383 SAPVAEELRDWVGWVKSRFRNLLLKLE 409
>gi|218192685|gb|EEC75112.1| hypothetical protein OsI_11288 [Oryza sativa Indica Group]
Length = 519
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 190/387 (49%), Gaps = 44/387 (11%)
Query: 31 MTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSI 90
+ L+ + + D R++ L + V + EE R V+ +L+ +V W K V+
Sbjct: 65 IICGLDPAAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAY 124
Query: 91 AKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTV 149
+ + TFGSY LG + +DIDA+CV P + +F + L+
Sbjct: 125 DQR---EQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEER 181
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS 209
EV+DL ++E A + D LL +++ R
Sbjct: 182 PEVSDLHSIENA---------------------------KAIHAFDPRLLAVVNEPSWRC 214
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
L+G RV +I++L+PNI+ F++ LR +KLWA+K G++ ++LG+ G+ A+L A +C ++
Sbjct: 215 LSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMH 274
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPV-LLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
P+A S+L FF +FS W WP PV L +P W P MPI+ P
Sbjct: 275 PHATLSSLFNSFFDIFSHWHWPLPVSLFDQPTP-------WRPHCC-----SFMPIVMPC 322
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
P + +++ ST ++EE ++G +++ NG W +LF + +Y+H+L ++
Sbjct: 323 SPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVL 382
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLE 415
S+ AE+ +W G ++S+ R+L+ LE
Sbjct: 383 SAPVAEELRDWVGWVKSRFRNLLLKLE 409
>gi|242786597|ref|XP_002480837.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
gi|218720984|gb|EED20403.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
Length = 420
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 117/198 (59%), Gaps = 38/198 (19%)
Query: 71 MEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAP 130
+ L + +V E++K V K + P E GGKI+T+GSYRLGV+
Sbjct: 15 ISTLQLIQRVVIEFVKTVGRRKGLSPAALEAAGGKIFTYGSYRLGVYGP----------- 63
Query: 131 RHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDD 190
V +AFVP+IK+ F GI +D++FARL L IP +
Sbjct: 64 ---------------------------VPDAFVPIIKLEFSGISLDLIFARLILPSIPLN 96
Query: 191 MDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVL 250
+DL+++ L+ LD K VRSLNG RVTD+IL LV + FRLALR IKLWA++ IYSN++
Sbjct: 97 LDLKNNGYLRGLDDKEVRSLNGTRVTDQILELVAQQKTFRLALRAIKLWAQRRAIYSNIV 156
Query: 251 GYLGGVSWAMLVARICQL 268
G+ GGV+WAMLVAR+CQL
Sbjct: 157 GFPGGVAWAMLVARVCQL 174
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 356 ISEDIYNGKTMWDKLFETPNFFTK-YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNL 414
I E I+ + W+ LF FF++ Y++YL + ASS + E W GL+ESK+RHL+G +
Sbjct: 177 IVEKIFAKQLTWNDLFTRHTFFSRDYKYYLQITASSKTKEADSVWSGLVESKLRHLVG-V 235
Query: 415 ER 416
ER
Sbjct: 236 ER 237
>gi|146163985|ref|XP_001012769.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146145863|gb|EAR92524.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 641
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 150/251 (59%), Gaps = 11/251 (4%)
Query: 44 DLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAE--- 100
D +R++E+ +KPY +E E S+ +++L +V +W E +A+ I +E
Sbjct: 44 DRERSQEIDYMMKPYFGTEETE--LSKQRYVNELQEIVTKWSTE--LAQQILGVSSEESK 99
Query: 101 KVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS-FFEKLKTVDEVTDLRAVE 159
K K+ TFGS LGV K DID +C P + R +F + L + V L +
Sbjct: 100 KYTAKLLTFGSSILGVSSKKGDIDMVCTCPNFIKRNPHFEEELCQILLNNENVKQLSNIR 159
Query: 160 EAFVPVIKMNFDGIEIDMLFARLALKEIPDDMD--LRDDMLLKNLDQKCVRSLNGCRVTD 217
A VP+I + +ID+ FA+L L ++P ++ + DD LL+N++++ + SL+G R
Sbjct: 160 TAKVPIITFQYKEQDIDISFAQLQLPQLPPTIEEYVSDD-LLQNMEERDILSLSGRRCNQ 218
Query: 218 EILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTL 277
I+R VPN++NF++ R IKLWA+ GIY N +G+LGG+SWA+LVA+ICQ++PN A+ L
Sbjct: 219 AIVRSVPNLQNFQITCRFIKLWAQSKGIYENSIGFLGGISWAILVAKICQMFPNYEANQL 278
Query: 278 VCKFFLVFSQW 288
+ +FF +S W
Sbjct: 279 LDEFFYYYSNW 289
>gi|219887573|gb|ACL54161.1| unknown [Zea mays]
gi|414888169|tpg|DAA64183.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888170|tpg|DAA64184.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 482
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 146/253 (57%), Gaps = 4/253 (1%)
Query: 42 QLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEK 101
++D +R+ L + LK + E+ + R +V+ +L +V W V+ +++P +A
Sbjct: 76 EVDHRRSSSLVQFLKDEGAVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQGLAT- 134
Query: 102 VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTVDEVTDLRAVEE 160
+ T+GSY LG H +DID LC+ P + +F + L+ EV+++ VE+
Sbjct: 135 --ATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEK 192
Query: 161 AFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEIL 220
A VP+++ F GI +D+ +A+L + + ++ LL+ +D + RSL+G RV ++I+
Sbjct: 193 AKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIV 252
Query: 221 RLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCK 280
+LVPN E F+ LR IKLWA+K G++ + LG+ G+ A+L A +C+ +P+A+ S L
Sbjct: 253 QLVPNAEKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVSGLFAV 312
Query: 281 FFLVFSQWKWPQP 293
FF F+ W W P
Sbjct: 313 FFQTFAHWPWQVP 325
>gi|402581474|gb|EJW75422.1| hypothetical protein WUBG_13666 [Wuchereria bancrofti]
Length = 351
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 161/326 (49%), Gaps = 47/326 (14%)
Query: 289 KWPQPVLLKKP------DNVNLGFPVWDPRVNVADR------YHLMPIITPAYPQQNSTF 336
+WP PV+LK+ D +L VWDPR DR +HLMPI+TPA+PQQNSTF
Sbjct: 36 EWPHPVVLKETEVSHARDMPSLQELVWDPRSRSGDRESPSRRFHLMPIVTPAFPQQNSTF 95
Query: 337 NVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQ 396
NV+ S+ I+ E ++G DI GK W LFE NFF++Y+H+L L+ S + +D+
Sbjct: 96 NVTKSSLKIIMNEIEEGLVTINDIMKGKAGWSALFEEVNFFSRYKHFLALLCLSATEQDE 155
Query: 397 LEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGE 456
L WCGL+ESK+R LI +LER I + HV+ + Y N +++ +
Sbjct: 156 LVWCGLVESKIRFLIASLERRESIRVCHVHTKYYQPR-----NDPFPVQVSLQNPR---- 206
Query: 457 NTSPPVSGVASMWFIGLDFIAANVILNLTYDIQH----FTNAVHWQATQSKMMKDGMKIE 512
+WFIGLD N ++ DIQH F + ++ AT + +GM +
Sbjct: 207 ---------CRLWFIGLDL---NKTVSRKIDIQHEVQSFMDLLNSMATTQNIYVEGMSVI 254
Query: 513 VRHVKKKQLSEYLPAHMLKKDKK--------TKSGDQNTSAKKRKSDQALDELGDKSRPR 564
+++K +L ++L L + KK T Q T + K+ + +
Sbjct: 255 PHYLRKAELVKWLKMEDLTRGKKAPKRRRIATSQNQQATGPSQNKARSETSSIASCNSSG 314
Query: 565 LDSDSNSLS--DKVNNISNNGDQSSS 588
S S SLS + N+ N+ SS+
Sbjct: 315 AASPSTSLSGTEVSKNVQNDLAMSST 340
>gi|211909028|gb|ACJ12807.1| poly(A) polymerase alpha [Bubalus bubalis]
Length = 108
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 90/108 (83%)
Query: 308 VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMW 367
VWDPRVN +DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W
Sbjct: 1 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEW 60
Query: 368 DKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
KLFE PNFF KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE
Sbjct: 61 SKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLE 108
>gi|115474207|ref|NP_001060702.1| Os07g0688500 [Oryza sativa Japonica Group]
gi|113612238|dbj|BAF22616.1| Os07g0688500 [Oryza sativa Japonica Group]
Length = 447
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 195/436 (44%), Gaps = 77/436 (17%)
Query: 16 HQDGKPQSQAPVTYGMTTALNLSPP--NQLDLQRTRELAECLKPYNVSETDEELSSRMEV 73
H P AP+ L+L P Q+D +RT L + LK + E R +V
Sbjct: 36 HHRLLPAPMAPIL------LHLHPAFLAQMDSRRTTSLLQFLKDEGGIPSPEADKKREQV 89
Query: 74 LSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHV 133
+ KLN +V +W K V+ + +PP + + T+GSY LG H +DIDALCV P
Sbjct: 90 IRKLNKIVMDWAKVVAYEQRVPP---RRATATVLTYGSYTLGAHGPESDIDALCVGPCIA 146
Query: 134 D-RADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMD 192
+ +F + L+ EV++L+ VE A +I N
Sbjct: 147 TLQYHFFIVLRQILEDRPEVSELQTVESAKA-IITSN----------------------- 182
Query: 193 LRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGY 252
LL+ LD RSL+G RV ++I++LVPN + F++ LR IKLWAK+ GI+ ++LG+
Sbjct: 183 ---PHLLQKLDSLSWRSLSGVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGF 239
Query: 253 LGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPR 312
G+ A+L A +CQ YP + + QP ++PD
Sbjct: 240 FAGIHLAILAAYVCQRYPYGTINVSLHG-----------QPTNCRRPDG----------- 277
Query: 313 VNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFE 372
MPI+ P P + T N++ T ++EE +G ++++ + W LF
Sbjct: 278 -------SFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFA 330
Query: 373 TPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTD 432
+ TKY +L + + ++E+ +W G ++S+ N + L + EC D
Sbjct: 331 PFPYATKYEEFLRIALCAPTSEELRDWAGWVKSRF---------NLILKLESIGVECDPD 381
Query: 433 TTGVIANGSGSPEITA 448
+T + + P I
Sbjct: 382 STEEVDHTVFEPSIVC 397
>gi|449673865|ref|XP_004208051.1| PREDICTED: poly(A) polymerase alpha-like, partial [Hydra
magnipapillata]
Length = 144
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 95/128 (74%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ +NLS P ++D + T+ L E LK Y V ET E++ RM VL KLN L EWI +
Sbjct: 17 YGITSPINLSGPKEIDEELTKSLEETLKDYGVFETQEQIQHRMVVLEKLNKLALEWIVKT 76
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
SIAKN+P +VA VGGKI+TFGS+RLGVH KGADID L VAPRH++RAD+F SF+E LK
Sbjct: 77 SIAKNMPESVANSVGGKIFTFGSFRLGVHTKGADIDTLLVAPRHIERADFFGSFYEFLKN 136
Query: 149 VDEVTDLR 156
+E DLR
Sbjct: 137 REETKDLR 144
>gi|108707804|gb|ABF95599.1| Poly polymerase central domain containing protein, expressed [Oryza
sativa Japonica Group]
Length = 550
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 191/418 (45%), Gaps = 75/418 (17%)
Query: 31 MTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSI 90
+ L+ + + D R++ L + V + EE R V+ +L+ +V W K V+
Sbjct: 65 IICGLDPAAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAY 124
Query: 91 AKNIPPTVAEKVGGKIYTFGSYRLG-----------------------VHHKGADIDALC 127
+ + TFGSY LG + +DIDA+C
Sbjct: 125 DQR---EQYWNTTATVLTFGSYALGEFPFEIFNISYCDKRCLKCSALKAYGPESDIDAVC 181
Query: 128 VAPRHVD-RADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKE 186
V P + +F + L+ EV+DL ++E A
Sbjct: 182 VGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENA------------------------- 216
Query: 187 IPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIY 246
+ D LL +++ R L+G RV +I++L+PNI+ F++ LR +KLWA+K G++
Sbjct: 217 --KAIHAFDPRLLAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLH 274
Query: 247 SNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPV-LLKKPDNVNLG 305
++LG+ G+ A+L A +C ++P+A S+L FF +FS W WP PV LL +P
Sbjct: 275 CHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSLLDQPTP---- 330
Query: 306 FPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQG--------KTIS 357
W P MPI+ P P + +++ ST ++EE ++G T+
Sbjct: 331 ---WRPHCC-----SFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKLGVCTVE 382
Query: 358 EDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
+ NG W +LF + +Y+H+L ++ S+ AE+ +W G ++S+ R+L+ LE
Sbjct: 383 QGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLE 440
>gi|242212591|ref|XP_002472128.1| predicted protein [Postia placenta Mad-698-R]
gi|220728772|gb|EED82659.1| predicted protein [Postia placenta Mad-698-R]
Length = 438
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 142/277 (51%), Gaps = 37/277 (13%)
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA A +V +FF++ QW WPQPVLLK+ + L VW+P++ ADR H MPIITP
Sbjct: 156 LYPNAIAGAIVSRFFIIMYQWTWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITP 215
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGK----------------TISEDIYNGKTMWDKLF 371
AYP +T NV+ ST+ IM EEFK+G+ I + + G W +LF
Sbjct: 216 AYPSMCATHNVTASTQMIMTEEFKKGQLEFYSPGRYLLFLAGSEIVDRVIVGSADWSELF 275
Query: 372 ETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYT 431
+FF KYR+YL +IAS+ S+E Q++W G +ES++R L+ LE + LAH + +
Sbjct: 276 SKHDFFHKYRYYLQVIASTGSSELQIKWAGTVESRIRQLVMKLEYVDSLTLAHPFIKGFE 335
Query: 432 DTTGVI--------ANGSGSPEITAEGKE--EGGENTSPPVSGVASMWFIGLDFIAANVI 481
+ A G S + KE EG E S S + ++IGL A
Sbjct: 336 QVLHCLSEEELRAAAQGDVSDAVAKRKKEEIEGKEGAS---SIYLTSFYIGL---AIEPK 389
Query: 482 LNLTYDIQHFTNAVH-WQATQSKMMKDGMKIEVRHVK 517
+++Y F V W K M I VRH+K
Sbjct: 390 QDISYPTTEFAKLVKMW----DKYDGSNMGIIVRHIK 422
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 102/155 (65%)
Query: 53 ECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSY 112
E L+ ET+EE R VL +L +LVK ++ + I + + AE GGKI+TFGSY
Sbjct: 2 EELRRQGTFETEEEAKRREIVLGRLASLVKRFVTRIGIKQGLSQAAAEASGGKIFTFGSY 61
Query: 113 RLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDG 172
RLGVH G+DID LCV P+HV R D+F F E LK + V + AV +A+VP+IK G
Sbjct: 62 RLGVHGPGSDIDTLCVVPKHVSREDFFEDFEEMLKATEGVDEASAVPDAYVPIIKTKISG 121
Query: 173 IEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCV 207
I ID+L ARLAL IPD + L+DD LL+NLD++C+
Sbjct: 122 IPIDLLMARLALSSIPDTLTLQDDNLLRNLDERCL 156
>gi|383455075|ref|YP_005369064.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
gi|380728996|gb|AFE04998.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
Length = 1021
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 165/350 (47%), Gaps = 26/350 (7%)
Query: 100 EKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVE 159
E++G ++ +GSY LG G+D+DA+ + P + R + S + L R V
Sbjct: 628 ERIGATLHPYGSYLLGTDGAGSDVDAVAIGPAELSRDAFAQSLLQALAP----GSARYVA 683
Query: 160 EAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVT--- 216
+A +P++K+ G+ D+ +A P+D + + LD +R++ G T
Sbjct: 684 DAAIPLVKLTLGGVSFDLAYAGRPEGVPPEDPLTLLGLHGEQLDPAGLRAVLGLADTLGL 743
Query: 217 -DEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARIC-QLYPNAAA 274
D + R E FR LR +K WA+ GIYS+ LGYLGG+SW +L A C + P+A
Sbjct: 744 MDAVARDAARTERFRTLLRAVKAWARARGIYSHALGYLGGLSWTLLAAWACTRATPDAMR 803
Query: 275 S--TLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQ 332
S L+ FF F+ W WPQPV L P+ R + L+P+I PA P +
Sbjct: 804 SDAALLSHFFGTFAAWPWPQPVTL-TPETA---------RYRPEGKRDLLPVIAPALPAR 853
Query: 333 NSTFNVSISTRTIMQEEFKQGKTISEDIYNGK--TMWDKLFETPNFFTKYRHYLVLIASS 390
N+ NVS ST +++EE + + + + + + W LF+ + L L +
Sbjct: 854 NTARNVSRSTYRVIREELLRARELVARARSSRAPSSWAALFQPLSAHETSPAALRLSVDA 913
Query: 391 VSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANG 440
+AED+ G I V L+ LE + ++ V P +G + G
Sbjct: 914 PTAEDREVVAGWILGHVTALVYRLEGDRRLS---VRPMQSAQASGTLLIG 960
>gi|340503458|gb|EGR30046.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 269
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 148/258 (57%), Gaps = 21/258 (8%)
Query: 104 GKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF-SSFFEKLKTVDEVTDLRAVEEAF 162
K+ FGS+ LGV K DID +C +P+ + R +F ++ K + +L+ + EA
Sbjct: 4 AKLLPFGSFLLGVSFKEGDIDMVCASPQFIKRETHFHEDLYKIFKANKNIKELKNIIEAN 63
Query: 163 VPVIKMNFDGIEIDMLFARLALKEIPDDMDLR-DDMLLKNLDQKCVRSLNGCRVTDEILR 221
+P+I ++ +ID+ FA+ L +P++++ + LL+++ +K V SLNG R I+
Sbjct: 64 IPIISFIYNDQDIDISFAQFKLNILPENIEGEIPEELLEDMTEKDVDSLNGRRCNQSIIN 123
Query: 222 LVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKF 281
V + E F+ L+ IKLWAK G+Y+N+LG+LGG+SWA+LVA+ICQ++PN + L+ +F
Sbjct: 124 SVKDQEKFKNTLKFIKLWAKSKGVYNNMLGFLGGISWAILVAKICQMFPNYEVNQLINEF 183
Query: 282 FLVFSQWKWPQ-PVLLKK-PDNVNLGFPVWDPRVNVADRYH--LMPIITPAYPQQNSTFN 337
F ++ W + Q P+ +K+ +N N+ R M ++T +P+ NST +
Sbjct: 184 FYYYTHWDFSQIPIKIKEYYENTK------HKHYNIKKRKESIFMNVMTSCFPEYNSTAH 237
Query: 338 VSISTRTIMQEEFKQGKT 355
+S EF+Q K
Sbjct: 238 LS---------EFEQSKN 246
>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
Length = 1080
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 177/402 (44%), Gaps = 45/402 (11%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGA 121
E+ E +R++ + +LN V ++G ++Y +GS+ +G G+
Sbjct: 674 ESSEAHRARIQAVKRLNE------------------VCSRLGLELYPYGSFLMGTSGTGS 715
Query: 122 DIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAR 181
D+DA+ + P H+ R D+ + + L + R + +A +P++K++ G+ D+ +A
Sbjct: 716 DVDAVVIGPAHLSREDFAGALLQALTQEKDCEGARFIADAAIPLVKLSLGGVHFDVSYAS 775
Query: 182 LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLV----PNIENFRLALRTIK 237
P + LD RSL G TD +L V ++E FR LR +K
Sbjct: 776 RPEGVAPCPPAELLARQGERLDLAGFRSLTGWADTDALLECVGREEADLERFRTLLRAVK 835
Query: 238 LWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST---LVCKFFLVFSQWKWPQPV 294
WAK G+YS+ LGYLGG SWA+L A C P ++ T L+ FF +F+ W WP PV
Sbjct: 836 TWAKARGVYSHALGYLGGFSWAVLTAWACMRAPRDSSRTEEQLLDYFFEMFAAWPWPLPV 895
Query: 295 LLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGK 354
L P R + MP++ PA P +N+ NVS ST +++EE +
Sbjct: 896 TL-TPGTA---------RYVPEGKRDQMPVVAPALPPRNTARNVSRSTLRVLREELARAS 945
Query: 355 TISEDIYNGKT--MWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIG 412
T WD LF +V+ + + ED+ G I + L+
Sbjct: 946 EALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSVEAKAHEDRQVAAGWILGHLTALVY 1005
Query: 413 NLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEG 454
LE + + L P + G G ++A+G E G
Sbjct: 1006 RLEGDRRLFLRPFPP---SQPEGPFRIG-----LSAQGPEAG 1039
>gi|219124076|ref|XP_002182338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406299|gb|EEC46239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 777
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 134/245 (54%), Gaps = 24/245 (9%)
Query: 195 DDMLLKNLDQKCVRSLNGCRVTDEILRLV--PNIENFRLALRTIKLWAKKHGIYSNVLGY 252
DD L + D VRSLNG RVT +L LV +E F++ L +K WA+ G+YSNVLG+
Sbjct: 314 DDSDLCDQDPAGVRSLNGARVTQTLLDLVIPVGLERFQMVLLMVKAWARAQGVYSNVLGF 373
Query: 253 LGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLG------- 305
GGV+WA+LVA +C+ YP ++ + V FF F+ WKWP PV L ++ ++
Sbjct: 374 WGGVNWAILVAYVCRAYPESSIADTVQLFFETFANWKWPTPVSLIDLNDASITTPPPGAA 433
Query: 306 -FPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEF-----KQGKTI--S 357
P W+P +++ D H+ PI+TPAYP NS++NV++ M E K + + S
Sbjct: 434 VLPSWNPAIHIRDGLHVCPILTPAYPVMNSSYNVALPQLRRMTEALQYTAHKIARWVDRS 493
Query: 358 EDIYN------GKTMWDKLFE-TPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHL 410
YN K W +L+ + +++HY+ + E + W L+ES++R L
Sbjct: 494 HTTYNRGVPVRRKIPWHRLWSLNAGWVFRHQHYVHATIRAPQGEAFVTWFRLVESRLRVL 553
Query: 411 IGNLE 415
I +LE
Sbjct: 554 ISSLE 558
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 65 EELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEK----VGGKIYTFGSYRLGVHHKG 120
+E R + + L L+ +W ++ + + + V I FGSYRLGVH G
Sbjct: 116 QEERVRRDAMDDLTRLLAQWAGTLAASVMTSTSGMSRDQLSVYPTIVPFGSYRLGVHRPG 175
Query: 121 A-DIDALCVAPRHVDRADYFSSFFEKLKTV-----DEVTDLRAVEEAFVPVIKMNF-DGI 173
+ D+D L +AP H R ++F+SF E L T + T + A+ A+ PV+K + +
Sbjct: 176 SSDLDVLVIAPPHCSRNEFFTSFVELLSTPANGSQNTFTQIHAIPTAYTPVLKCQYASSL 235
Query: 174 EIDMLFARLA 183
+DMLF +A
Sbjct: 236 PMDMLFVSVA 245
>gi|344256545|gb|EGW12649.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 349
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 118/195 (60%), Gaps = 27/195 (13%)
Query: 345 IMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIE 404
+M EE KQG I+++I K W KLFE PNFF KY+HY+VL+AS+ + + +LE L+E
Sbjct: 2 VMVEELKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAHTEKQRLECVDLVE 61
Query: 405 SKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSG 464
SK+ L+G+LE+N I LAHVNP+ + +P+ + +E
Sbjct: 62 SKICILVGSLEKNEFIKLAHVNPQSF-----------PAPKDNPDKEE------------ 98
Query: 465 VASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQ 520
+MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI HVK+KQ
Sbjct: 99 FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYSQAINSKMFELDMKIAAMHVKRKQ 158
Query: 521 LSEYLPAHMLKKDKK 535
L + LP+HML+K KK
Sbjct: 159 LHQLLPSHMLQKRKK 173
>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
aurantiaca DW4/3-1]
Length = 1024
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 177/402 (44%), Gaps = 45/402 (11%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGA 121
E+ E +R++ + +LN V ++G ++Y +GS+ +G G+
Sbjct: 618 ESSEAHRARIQAVKRLNE------------------VCSRLGLELYPYGSFLMGTSGTGS 659
Query: 122 DIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAR 181
D+DA+ + P H+ R D+ + + L + R + +A +P++K++ G+ D+ +A
Sbjct: 660 DVDAVVIGPAHLSREDFAGALLQALTQEKDCEGARFIADAAIPLVKLSLGGVHFDVSYAS 719
Query: 182 LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLV----PNIENFRLALRTIK 237
P + LD RSL G TD +L V ++E FR LR +K
Sbjct: 720 RPEGVAPCPPAELLARQGERLDLAGFRSLTGWADTDALLECVGREEADLERFRTLLRAVK 779
Query: 238 LWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST---LVCKFFLVFSQWKWPQPV 294
WAK G+YS+ LGYLGG SWA+L A C P ++ T L+ FF +F+ W WP PV
Sbjct: 780 TWAKARGVYSHALGYLGGFSWAVLTAWACMRAPRDSSRTEEQLLDYFFEMFAAWPWPLPV 839
Query: 295 LLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGK 354
L P R + MP++ PA P +N+ NVS ST +++EE +
Sbjct: 840 TL-TPGTA---------RYVPEGKRDQMPVVAPALPPRNTARNVSRSTLRVLREELARAS 889
Query: 355 TISEDIYNGKT--MWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIG 412
T WD LF +V+ + + ED+ G I + L+
Sbjct: 890 EALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSVEAKAHEDRQVAAGWILGHLTALVY 949
Query: 413 NLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEG 454
LE + + L P + G G ++A+G E G
Sbjct: 950 RLEGDRRLFLRPFPP---SQPEGPFRIG-----LSAQGPEAG 983
>gi|238013826|gb|ACR37948.1| unknown [Zea mays]
Length = 428
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 132/263 (50%), Gaps = 29/263 (11%)
Query: 277 LVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTF 336
LV +FF VF+QW+WP PV+L + LGFPVWDPR N DR H MPIITPAYP NS++
Sbjct: 2 LVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSSY 61
Query: 337 NVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQ 396
NVS ST +M E+F+ G I ++I KT W LFE FF Y++YL + + ED
Sbjct: 62 NVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDEDL 121
Query: 397 LEWCGLIESKVRHLIGNLERNPHINL-AHVNPECYTDTTGVIANGSGSPEITAEGKEEGG 455
W G +ES++R L +ER+ + L H P Y D + A+ +
Sbjct: 122 RLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA-------------- 167
Query: 456 ENTSPPVSGVASMWFIGLDFI-AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
+F+GL + +DI+ + + K GM++ V
Sbjct: 168 -------------FFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVS 214
Query: 515 HVKKKQLSEYLPAHMLKKDKKTK 537
HV++KQ+ Y+ K+ + ++
Sbjct: 215 HVRRKQVPAYVFPEGYKRPRPSR 237
>gi|413955903|gb|AFW88552.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 370
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 149/276 (53%), Gaps = 4/276 (1%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G P + A + + AL +D R+R L + + + + E+ R V+ +L
Sbjct: 44 GPPTTGALLPLPIPVALPHEVIMYMDECRSRSLLKFISNAGIEPSLEDERRRERVVRELG 103
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RAD 137
+V +W + V+ + + + TFGSY LG + +DID LC+ P +
Sbjct: 104 KIVMDWARRVAYEQGKQHWITS---ATVLTFGSYALGAYGPESDIDVLCIGPYIASLQHH 160
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM 197
+F + L+ EV++L ++E A VP+++ F+GI +D + +L + + M D
Sbjct: 161 FFVVLRQMLEGRPEVSELHSIEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPH 220
Query: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+L+N+D R L+G R +I++LVPN++ F+ LR +KLWA+K G+ ++LG+ G+
Sbjct: 221 VLENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIH 280
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQP 293
A+L A +C+ +PNA+ +TL+ FF +F W WP P
Sbjct: 281 LAILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLP 316
>gi|300120198|emb|CBK19752.2| unnamed protein product [Blastocystis hominis]
Length = 359
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 115/194 (59%), Gaps = 4/194 (2%)
Query: 240 AKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKP 299
A K GIY NV GYLGGV+ A+L LYPNA AS ++ F +F++W W +PVL++
Sbjct: 109 AYKRGIYKNVTGYLGGVNCALLCCYASLLYPNATASVVLYNCFRIFAEWDWQKPVLVRDV 168
Query: 300 D-NVNLGFP--VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTI 356
N LG VW+P+ N + L PI+TP YP QNST+NV STR +M EFK+ + +
Sbjct: 169 QLNPELGHDKDVWNPKENERCQNDLFPILTPCYPSQNSTYNVMASTRDVMVAEFKRARDV 228
Query: 357 SEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLER 416
+ I G+T W LF+ FFT Y++Y+ + S+ ++E W G +ES++R +E
Sbjct: 229 TLSILKGETTWATLFKEFPFFTSYKYYIQIEVSAKTSEVFNNWYGFVESQIRRYTRMIEG 288
Query: 417 NPHINLAHVNPECY 430
N I + HV P +
Sbjct: 289 NKSI-VIHVYPTSF 301
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGA 121
E+ E+ R E+L L ++++E +K++ AKN+ + +YTFGS+R+ VH A
Sbjct: 9 ESKNEIDHREELLKSLQSILRECVKKILTAKNLYSNQEPEELASLYTFGSFRMMVHEPWA 68
Query: 122 DIDALCVAPRHVDRADYFSSFFEKLKTVDEV-TDLRAVEEAFVPVIKMNFDG 172
DID +CV P V R ++FS L+ + TD+ ++ A+ I N G
Sbjct: 69 DIDTMCVGPGSVTREEFFSVVSSALQGEETCATDVNVIDTAYKRGIYKNVTG 120
>gi|308482424|ref|XP_003103415.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
gi|308259836|gb|EFP03789.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
Length = 388
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 124/240 (51%), Gaps = 41/240 (17%)
Query: 308 VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMW 367
VWDPR+N +DR+HLMPIITPA+P+QNST NVS ST I+QEE K I + I+ G W
Sbjct: 156 VWDPRINYSDRFHLMPIITPAFPEQNSTHNVSKSTLHIIQEEMKSALLICDQIHAGSATW 215
Query: 368 DKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNP 427
+ LFE NFF++YRH++ L + S E G ES++R L+ +ERN + LAH+NP
Sbjct: 216 NNLFEEVNFFSRYRHFVALSMNEESNE------GFFESRIRQLVQIMERNCQVKLAHINP 269
Query: 428 ECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYD 487
+ + AS+WF+GL+ I L+LT +
Sbjct: 270 KKFKSVQN------------------------------ASVWFLGLELIENVKNLDLTAE 299
Query: 488 IQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKK 547
I+ F V QA ++ D +VK+ L +++P LKK + TS K+
Sbjct: 300 IEGFKKNVEKQANGIQITLDAT-----YVKRSGLIKWIPVADLKKGRFVNKCTGTTSKKR 354
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
Query: 23 SQAPVT--YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
S AP T YG++ ++ + P + D + T L E L + E+ EE +R++VLSKLN L
Sbjct: 2 SCAPSTKIYGVSQPISTNAPTKSDFKLTDSLNESLHQFECYESKEESMTRIKVLSKLNAL 61
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFS 140
VK+WIK ++ A+ IP GGK+ +FGSYRLGVH+ GADIDAL +APRHV R D+F+
Sbjct: 62 VKQWIKTLT-AQRIPNGHELNAGGKLISFGSYRLGVHNSGADIDALVIAPRHVARLDFFT 120
Query: 141 SFFEKLKTVDEVTDLRAVEEAFVPVIKM 168
SF + L V +L VE AFVP++ +
Sbjct: 121 SFKKMLLENSSVKNLACVENAFVPIMTL 148
>gi|154417414|ref|XP_001581727.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121915957|gb|EAY20741.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 467
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 232/513 (45%), Gaps = 71/513 (13%)
Query: 38 SPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV---KEWIKEVSIAKNI 94
SP N D + ++ + T E+ SR V+ + N+ E + +S + N
Sbjct: 10 SPNNNTDSNPDESIRHVIRSSKLMPTLEDYQSRKIVVYIIKNIAIKFAERKQRLSFSMNT 69
Query: 95 PPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTD 154
P E I+ GSY + +D+D + +AP++ D+F F+E+L + +
Sbjct: 70 DPKSPEIF---IHENGSYLMDTWEPDSDVDVILIAPKYFTYKDFFEGFYEELIRHPSIKE 126
Query: 155 LRAVEEAFVPVIKMNFDGIEIDMLFA----RLALKEI----PDDMDLRDDMLLKNLDQKC 206
VE AFVP+IK + I +D+ FA ++ +K + +DMD L+ K
Sbjct: 127 TIKVENAFVPIIKTVCNDISVDISFAPLNNQIKIKNLNNIKKEDMD--------KLEPKA 178
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARIC 266
SLNG I L+ N NF R I+ WA+K I+ N+ GYL G++ +M+ A IC
Sbjct: 179 QLSLNGYLNCLLIRDLMKNHPNFPYFTRFIRNWAQKREIFGNLYGYLKGINISMMCAIIC 238
Query: 267 QLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIIT 326
+PN + S L+ FF FS W W + L D+ F + DP M ++T
Sbjct: 239 NQHPNCSLSMLIFHFFEYFSSWDWDIQLNL---DSNTPDFQLNDP----------MILMT 285
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVL 386
+YPQ NS V+ S+R + +E ++ ++ W +LF+ FF YR++L +
Sbjct: 286 QSYPQINSLRAVTTSSRKRIIKELQRALETTKKALISDLSWQELFKGGCFFADYRYFLCI 345
Query: 387 IASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEI 446
+++ + E G + SK+ L+ LE P I A++ P +I
Sbjct: 346 DLIPTNSQIKDEIIGFLSSKLTRLVKILEEIPGICEANIWPS----------------KI 389
Query: 447 TAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMK 506
+ GK +++IGL+ + + T DI H N + S + K
Sbjct: 390 SYGGK---------------IIFYIGLNTKSGQ---SKTIDINHAKNNFISYISSSTLGK 431
Query: 507 DGMKIEVRHVKKKQL-SEYLPAHMLKKDKKTKS 538
M I + ++KK+L E L + ++++ ++K+
Sbjct: 432 -AMSINFKIIRKKELKQEPLQSEVIERSLQSKA 463
>gi|344252871|gb|EGW08975.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 384
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 109/192 (56%), Gaps = 40/192 (20%)
Query: 348 EEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKV 407
EEFKQG I+++I K W K FE PNFF K +HY+VL+AS+ + + +LEW GL+ESK+
Sbjct: 5 EEFKQGLAITDEILLSKAKWSKFFEAPNFFQKCKHYIVLLASAPTEKQRLEWVGLVESKI 64
Query: 408 RHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVAS 467
R L+G+LE+N I LAHVNPE T
Sbjct: 65 RILVGSLEKNEFITLAHVNPEFRT------------------------------------ 88
Query: 468 MWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSE 523
+W IGL F + N+ ++LTYDIQ F + V+ QA SKM + MK HVK+KQL +
Sbjct: 89 IWVIGLVFKKTENSENLNVDLTYDIQSFMDTVYRQAINSKMFELDMKTAAMHVKRKQLHQ 148
Query: 524 YLPAHMLKKDKK 535
LP+++L+K KK
Sbjct: 149 LLPSYVLQKRKK 160
>gi|70917416|ref|XP_732847.1| poly(A) polymerase PAP [Plasmodium chabaudi chabaudi]
gi|56504096|emb|CAH75014.1| poly(A) polymerase PAP, putative [Plasmodium chabaudi chabaudi]
Length = 199
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 122/190 (64%), Gaps = 1/190 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG++ ++L P + DL++ ++ E LK YN+ ET++ L R +VL +N L E++ E+
Sbjct: 9 YGVSDPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIEL 68
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
SI++ I A+++ G +YTFGSYRLGV +DID + +AP++V R +F+ F+ KL+
Sbjct: 69 SISQGINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNVTREIFFNEFYLKLQQ 128
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPD-DMDLRDDMLLKNLDQKCV 207
V L+A+ E + P+I+ +D ++ID+L A L + + D L +D +LKNLD+ V
Sbjct: 129 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTV 188
Query: 208 RSLNGCRVTD 217
RSLNG RV D
Sbjct: 189 RSLNGIRVAD 198
>gi|358333281|dbj|GAA51822.1| poly(A) polymerase [Clonorchis sinensis]
Length = 426
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 152/323 (47%), Gaps = 43/323 (13%)
Query: 144 EKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM--LLKN 201
E T++ V L + E +V + + ++D++ +RLA IP +D L +N
Sbjct: 24 EAYPTLNIVRSLEHIGEQWVRELAND----QVDLVISRLATSYIPQQLDFEQTPGDLYRN 79
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D VRSL+G + E+ +++ +F LR I+ W + I S V G+ ++W ++
Sbjct: 80 MDAISVRSLSGLHLAHELNKMMFGHAHFLPLLRVIRTWVRARAIGSYVYGFPASIAWTIM 139
Query: 262 VARICQ-LYPNAAASTL-------VCK----------------------------FFLVF 285
V IC+ L N+ ST VC+ FF F
Sbjct: 140 VVYICRRLGDNSQISTFCVCRRSSVCRTSEPAAERNSGEESLASRSHALFCLVYTFFAQF 199
Query: 286 SQWKWPQPVLLKKPDNV-NLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRT 344
+ W WP PV + +L WDP+ N D LMPI+TP +P +N+ F V +TR
Sbjct: 200 ASWPWPHPVQIASIKFASDLNIFSWDPQRNAQDGRDLMPILTPVFPNKNAAFTVRQATRK 259
Query: 345 IMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIE 404
I+ +E + + I D+ G W+KLFE + +RH+L+L + S E+ + GLI+
Sbjct: 260 IVTDELIRARDIVSDVLRGSGTWEKLFERYDLRDDHRHFLLLTLQTTSKEELVVVGGLID 319
Query: 405 SKVRHLIGNLERNPHINLAHVNP 427
S++R L LE +I A + P
Sbjct: 320 SRLRDLAQALEDEQYIRSARIAP 342
>gi|261265299|gb|ACX55867.1| polyA polymerase [Bubalus bubalis]
Length = 83
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 72/83 (86%)
Query: 252 YLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDP 311
+LGGVSWAMLVAR CQLYPNA ASTLV KFFLV +W+WP PVLLK+P+ NL PVWDP
Sbjct: 1 FLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVSPKWEWPNPVLLKQPEECNLNLPVWDP 60
Query: 312 RVNVADRYHLMPIITPAYPQQNS 334
RVN +DRYHLMPIITPAYPQQNS
Sbjct: 61 RVNPSDRYHLMPIITPAYPQQNS 83
>gi|403331436|gb|EJY64664.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 1239
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 183/441 (41%), Gaps = 108/441 (24%)
Query: 58 YNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIA-KNIPPTVAEKVGGKIYTFGSYRLGV 116
Y + E E+ R E+L+KL +++ +W E ++ + I AEK I+ FGSY L
Sbjct: 116 YTIYEDQEQKRKRQEILAKLKDILDKWQIECAVKDRKILREDAEKRHASIHPFGSYELQA 175
Query: 117 HHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEID 176
H D+D +CV P ++ D+F+ F + + +EVT++ V +A VPV+K F G +ID
Sbjct: 176 HFPETDMDVICVLPSYILHDDFFNKFKNLITSYEEVTNVIDVVDARVPVLKFKFQGFQID 235
Query: 177 MLFARLALKEIPDDMD----LRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLA 232
ML+A + K I ++ ++D+ + L Q
Sbjct: 236 MLYACIDYKLIENNPKIPKMIKDETIFNKLSQ---------------------------- 267
Query: 233 LRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQ 292
GGVS+A+LVA+ICQ + ++ KFF V++ WKW
Sbjct: 268 ---------------------GGVSYAILVAKICQDNTDLYLCDIIYKFFEVYADWKWFD 306
Query: 293 PVLLKKPDNVNLGFPVWDPRVNVADRYH--LMPIITPAYPQQNSTFNVSISTRTIMQEEF 350
PV ++ + + ++ V D Y +MPI+TP +NS + V T + +EF
Sbjct: 307 PVFIRVGKKKDKTKLDLN-KLQVLDAYSQDIMPILTPNTNPKNSAYRVCSHTFDTICKEF 365
Query: 351 KQGKTISEDI-------------------------------------------------Y 361
+GK + +++
Sbjct: 366 TRGKNLMKELIPQSQKTIKPHPAALAKLALDQEETKLTVDALQIQESNQESQVQSPVQKQ 425
Query: 362 NGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHIN 421
K W KLF+ FF +Y H+L + S L+W G +ES++R L+ L+ I+
Sbjct: 426 KQKQSWIKLFQKFRFFDQYEHFLKIDILSTDESAHLKWLGYVESQLRRLMQLLQDIEQIS 485
Query: 422 LAHVNPECYT--DTTGVIANG 440
+ P + +T I N
Sbjct: 486 GLRIYPRSFNREETQDTINNA 506
>gi|442319649|ref|YP_007359670.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
gi|441487291|gb|AGC43986.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
Length = 1016
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 142/292 (48%), Gaps = 33/292 (11%)
Query: 98 VAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV--DEVTDL 155
+ E++G ++ +GSY LG G+D+DA+ + P + R D+ + ++ T + +
Sbjct: 625 LCERIGTSLHPYGSYLLGTDEAGSDVDAVAIGPSSLSRDDFAHALLREVATSAPEAASSA 684
Query: 156 RAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRV 215
R V +A +P++K++ G+ D+ +A P + LD +RS+ G
Sbjct: 685 RFVADAAIPLVKLSLGGVSFDVSYASRPEGVTPCEPLTLLAQHAPQLDTSGLRSVLGVAD 744
Query: 216 TDEILRLV----PNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARIC-QLYP 270
+ +L + E FR LR +K WAK GIYS+ LGY+GG+SW +L A C + P
Sbjct: 745 SQGVLDALGTDEATHERFRNLLRAVKRWAKARGIYSHALGYMGGLSWTVLAAWACTRGAP 804
Query: 271 NAAAS--TLVCKFFLVFSQWKWPQPVLLK------KPDNVNLGFPVWDPRVNVADRYHLM 322
+AA S L+ FF F+ W WPQPV L +PD + LM
Sbjct: 805 DAAKSDAELLAHFFQTFASWPWPQPVALTQETAGYRPDG----------------KRDLM 848
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKT--MWDKLFE 372
P+I PA P +N+ NVS ST ++EE + + + + W+ LF+
Sbjct: 849 PVIAPAEPLRNTARNVSRSTFRTVREELVRARELVTGARASSSPHAWEPLFQ 900
>gi|242035935|ref|XP_002465362.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
gi|241919216|gb|EER92360.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
Length = 589
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 154/296 (52%), Gaps = 32/296 (10%)
Query: 121 ADIDALCVAPRHVD-RADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLF 179
+DID LC+ P + +F + L+ EV++L+++E A VP+++ F+GI +D +
Sbjct: 218 SDIDVLCIGPYIATLQHHFFVVLRQMLEGRPEVSELQSIEGAKVPLMRFKFNGILVDFPY 277
Query: 180 ARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLW 239
+L + M D +L+N+D R L+G R +I++LVPN++
Sbjct: 278 VQLPFINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQLVPNMK------------ 325
Query: 240 AKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKP 299
+LG+ G+ A+L A +C+ +PNA+ +TL+ FF +F+ W WP PV L P
Sbjct: 326 ---------LLGFFAGIHLAILAAYVCRRHPNASINTLLSLFFDIFAHWPWPLPVSLLDP 376
Query: 300 DNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISED 359
+ G D LMPI+ P P + + + + ST + ++EE ++G +++D
Sbjct: 377 PVLCRG----------PDGCSLMPIMLPCNPPEFCSSSTTESTFSKIKEELRRGYALTKD 426
Query: 360 IYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
+ W LF + + +Y+ +L ++ S+ E+ +W G ++S+ R+L+ LE
Sbjct: 427 TRSTDFDWSWLFASFPYGARYKCFLRIVLSAPLDEELRDWVGWVKSRFRNLLLKLE 482
>gi|401415606|ref|XP_003872298.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488522|emb|CBZ23768.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 500
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 179/364 (49%), Gaps = 33/364 (9%)
Query: 71 MEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAP 130
ME ++ LV++ ++++ A+ P+ A ++Y FGS LG G+DID + +
Sbjct: 38 MEKTDEVVRLVRQLLEKLLQAE---PSAA-AAWTQVYVFGSSGLGAAITGSDIDLIALCS 93
Query: 131 RHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDD 190
V+ + +F F + + D+ V A VP+IK +++G+ +D+LFA + ++ PD
Sbjct: 94 ASVNTSLFFQKFPRSAE--GRLQDVVVVTSARVPLIKFSYNGVHVDLLFASVDMRTAPDT 151
Query: 191 MDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVP-NIENFRLALRTIKLWAKKHGIYSNV 249
+L D L + C ++NG R EI R +P ++ + LR +K WA + +Y N+
Sbjct: 152 NELLRDDFLSLVSLPCRATVNGIRTILEIRRRLPLPLDAYACVLRAVKYWAARRQVYGNL 211
Query: 250 LGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQ------PV-LLKKPDNV 302
+ GV A++VAR CQL P A S+++ +FF W W Q PV ++ +NV
Sbjct: 212 YTFPNGVCLAIMVARACQLCP-VADSSVILRFFFSLYVW-WLQRGTRIDPVSIVPTDENV 269
Query: 303 NLGF-----PVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTIS 357
+ P WD + AD L P++ PA P N+ V S + +E + + +
Sbjct: 270 AIARVPGMPPPWDAVWDAAD---LFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLC 326
Query: 358 EDIYNGKTMWDKLFETPNFFTKYRHYLVLIASS-----VSAEDQL-EWCGLIESKVRHLI 411
+ + L+E N ++R ++ + SS + ED + W G +ESK+R +
Sbjct: 327 SLV---PMPYSALWEPYNVLDEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKLRMFV 383
Query: 412 GNLE 415
LE
Sbjct: 384 YALE 387
>gi|238492513|ref|XP_002377493.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
gi|220695987|gb|EED52329.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
Length = 1297
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 198/428 (46%), Gaps = 63/428 (14%)
Query: 9 SMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELS 68
+++ + P G +AP+T + +P L+L L ECLK Y ++EE++
Sbjct: 556 TVKLNGPRSGGLESEKAPIT------VEKAP---LNLGGIDGLKECLKGYLAFPSNEEIT 606
Query: 69 SRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCV 128
R E L+KE + N+P + ++ GSY GV + +D+D L +
Sbjct: 607 QRQEAF----ELIKELVNRRD--ANLPAGTRLDLLFEVVAVGSYGFGVWNSSSDMDILVI 660
Query: 129 APRHVDRADYFSSFFEKLK--TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLF--ARLAL 184
V +F+ KL+ T +V LR V+ A ++++ G+ +D+ + A +
Sbjct: 661 G--QVSPRTFFALMIAKLRRATDSDVVLLRKVKAASGIMLELEVRGVRVDLQYCAATRVV 718
Query: 185 KEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHG 244
+ P ++L D +L + + LN R + R +P++ +FRLA R IK+WA++ G
Sbjct: 719 ESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPDLASFRLAYRFIKIWAQRRG 778
Query: 245 IYSNVLGYLGGVSWAMLVARICQLYPNAA----ASTLVCKFFLVFSQWKWPQ-----PVL 295
IYS+ LGYLGG+ +L+ARIC L A A+ ++ FF ++Q+ W + P
Sbjct: 779 IYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADIITTFFKHYAQFNWEKQVVYDPSF 838
Query: 296 LKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSI-STRTIMQEEFKQGK 354
K P PR R L+ I++ P+ N SI STRT++QE + K
Sbjct: 839 YKSP-----------PRYFRPQREPLV-ILSQHQPKVNVARAASIPSTRTLVQEFQRADK 886
Query: 355 TISEDIYNGKTMWDKLFET-------PNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKV 407
+S+ W++L + F YR Y A+ +++ G +K
Sbjct: 887 LLSQQ----DVTWEQLAGSIENSTGADEFLKSYRSY---------AKVNVQYWGGAATKG 933
Query: 408 RHLIGNLE 415
R L+G LE
Sbjct: 934 RMLVGWLE 941
>gi|434384462|ref|YP_007095073.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
gi|428015452|gb|AFY91546.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
Length = 1037
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 171/338 (50%), Gaps = 34/338 (10%)
Query: 103 GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLR------ 156
++ GS RLGV +D+D +C+ P ++ + + + L+ + + + R
Sbjct: 637 AASLHLLGSARLGVASSTSDLDVVCLIPDYLTGESFLTRVADCLQGLCDSPEERLCQRSQ 696
Query: 157 AVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVT 216
V +A PV+++ +GI +D+L+ ++A+ + + ++RD L++ K +S+ GC
Sbjct: 697 VVLDAKYPVLRLEIEGISLDLLYTQVAVSDGWETRNIRD---LRS-QIKDTKSIVGCWEA 752
Query: 217 DEILRLVPN---IENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY--PN 271
D I+ LV +E F++ L+ ++ WAK G+Y N G+LGG SW++L A C Y P+
Sbjct: 753 DLIVDLVKQQLRLERFQMLLKAVRSWAKVRGLYGNSWGFLGGFSWSLLCAYTCIDYRGPD 812
Query: 272 AAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQ 331
+ + L+ FF + SQ W Q + L + LG + V L+PII+ P
Sbjct: 813 KSLAALLANFFQILSQHNWRQTIALTE-----LG-----KQHQVKLPQDLLPIISSIEPC 862
Query: 332 QNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSV 391
+N+ N++ ST I+++EF + IS +I GK W L+E P T + L+ I
Sbjct: 863 KNTARNITRSTAKILRDEFARAAEISTNILVGKDAWTSLYE-PIDLTIGTNALLSIEILD 921
Query: 392 SAEDQLEWCG-LIESKVRHLIGNLER-------NPHIN 421
+ E + C L+ES + L LE+ NP I+
Sbjct: 922 TDEQCRQKCSDLLESTIIGLTIQLEQLDVFVRPNPQIS 959
>gi|402576343|gb|EJW70302.1| hypothetical protein WUBG_18790, partial [Wuchereria bancrofti]
Length = 79
Score = 133 bits (334), Expect = 3e-28, Method: Composition-based stats.
Identities = 58/76 (76%), Positives = 64/76 (84%)
Query: 213 CRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNA 272
CRV DEILRLVPNI NF ALR IKLWAK HGIYSNVLGYLGGVSWA+LVAR CQLYPN
Sbjct: 1 CRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNT 60
Query: 273 AASTLVCKFFLVFSQW 288
+ LV KFFL++++W
Sbjct: 61 GPARLVQKFFLLYTKW 76
>gi|76154117|gb|AAX25625.2| SJCHGC06256 protein [Schistosoma japonicum]
Length = 166
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 89/141 (63%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G T AL+ P + DL+ T+EL L N+ ET EE+S R E L +L + WI++ +
Sbjct: 22 GETGALSFKKPTEQDLKDTQELEASLAQLNIFETQEEISQRREALVRLQEISNGWIRQKA 81
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
+ +N+P VA GKI+TFGSYRLGV+ +GADID+L V PR + R ++FS F L
Sbjct: 82 LEQNLPTHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITREEFFSDFQTVLAEN 141
Query: 150 DEVTDLRAVEEAFVPVIKMNF 170
V DL AV +AFVPV+KM F
Sbjct: 142 PNVEDLHAVVDAFVPVLKMKF 162
>gi|391865116|gb|EIT74407.1| hypothetical protein Ao3042_09684 [Aspergillus oryzae 3.042]
Length = 973
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 184/395 (46%), Gaps = 56/395 (14%)
Query: 43 LDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKV 102
L+L L ECLK Y ++EE++ R E L+KE + N+P +
Sbjct: 581 LNLGGIDGLKECLKGYLAFPSNEEITQRQEAF----ELIKELVNRRD--ANLPAGTRLDL 634
Query: 103 GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK--TVDEVTDLRAVEE 160
++ GSY GV + +D+D L + V +F+ KL+ T +V LR V+
Sbjct: 635 LFEVVPVGSYGFGVWNSSSDMDILVIG--QVSPRTFFALIIAKLRRATDSDVVLLRKVKA 692
Query: 161 AFVPVIKMNFDGIEIDMLF--ARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDE 218
A ++++ G+ +D+ + A ++ P ++L D +L + + LN R
Sbjct: 693 ASGIMLELEVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHY 752
Query: 219 ILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA----A 274
+ R +P++ +FRLA R IK+WA++ GIYS+ LGYLGG+ +L+ARIC L A A
Sbjct: 753 LQRTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISA 812
Query: 275 STLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMP------IITPA 328
+ ++ FF ++Q+ W + V V+DP + + P I++
Sbjct: 813 ADIITTFFKHYAQFNWEKQV-------------VYDPSFYKSPPRYFRPQREPLVILSQH 859
Query: 329 YPQQNSTFNVSI-STRTIMQEEFKQGKTISEDIYNGKTMWDKLFET-------PNFFTKY 380
P+ N SI STRT++QE + K +S+ W++L + F Y
Sbjct: 860 QPKVNVARAASIPSTRTLVQEFQRADKLLSQQ----DVTWEQLAGSIENSTGADEFLKSY 915
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
R Y A+ +++ G +K R L+G LE
Sbjct: 916 RSY---------AKVNVQYWGGAATKGRMLVGWLE 941
>gi|427738965|ref|YP_007058509.1| poly(A) polymerase [Rivularia sp. PCC 7116]
gi|427374006|gb|AFY57962.1| poly(A) polymerase [Rivularia sp. PCC 7116]
Length = 1067
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 148/315 (46%), Gaps = 32/315 (10%)
Query: 109 FGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKM 168
GSYRLGV +D+D +C P ++ D+ + ++LK + E L V +A VP++++
Sbjct: 722 LGSYRLGVESPESDLDVVCQIPTYLSGDDFLKNVQQRLKGLCESIQL--VLDAKVPLLRL 779
Query: 169 NFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRS---LNGCRVTDEILRLVPN 225
+GI +D+L+ + D ++ K +S + GC D I V
Sbjct: 780 KLEGISLDLLYTGV------------DKNWASGINPKPTKSEMAIIGCWEADFIREFVQE 827
Query: 226 ---IENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYP--NAAASTLVCK 280
++F+ LR ++ WAK IY N G+LGG+SWA+L A CQ + L+
Sbjct: 828 YVPFDSFQWLLRAVRAWAKSRRIYGNNWGFLGGLSWALLSAWSCQYCDKNHTQPDKLLAN 887
Query: 281 FFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSI 340
FF +Q+ W QP+ L + + V PR L+PIIT P QN+ N++
Sbjct: 888 FFNHLNQYNWRQPIALT---DAGKQYSVQVPR-------DLLPIITSIEPCQNTARNITR 937
Query: 341 STRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWC 400
ST I+ EF + ++++I G W LFE N + +L L + + C
Sbjct: 938 STAEILSGEFARATEMTQEIAAGNLDWSSLFEPINLQQESDIFLNLKLIGNDKQQLEKEC 997
Query: 401 GLIESKVRHLIGNLE 415
G +E + LI LE
Sbjct: 998 GYLEGYIISLIIQLE 1012
>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1251
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 36/289 (12%)
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
VS+ K I V E I GS++LGV +D+D LC+ P + + ++ + +
Sbjct: 811 VSVLKRI---VGEH--ASIQLTGSHQLGVDTSDSDLDVLCLGPHSLSLDAFQAAAVNEFE 865
Query: 148 TVDEVTDLRAVEEAFVPVIKMNF-DGIEIDMLFARLA----LKEIPDDMDLRDDMLLKNL 202
+ + +R V +A VP++K+ F G E D+L+ RL L P + R LK +
Sbjct: 866 AIG-LRSVRPVCDALVPLVKLVFRSGAEADLLYVRLPADAHLPCTPAQIKPRS---LKAM 921
Query: 203 DQKCVRSLNGCRVTDEILRLVPN--IENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
D +L G D ++ +P + FR LR +K WA GIYSN G+LGG SW++
Sbjct: 922 DSTAQLTLQGWLENDALVNAIPQPLLSTFRSLLRRVKQWALARGIYSNAAGFLGGFSWSV 981
Query: 261 LVAR-ICQLYPNAAAS-----------TLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPV 308
LVA + + P+ L+ FF+ + W WPQP+LL P L
Sbjct: 982 LVAHFMVKTKPSPLGDEDQDSTGRPLLALMHAFFVHVANWPWPQPILLNMPLGATL---- 1037
Query: 309 WDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTIS 357
P + + +MP++TP +P +NS VS+ST ++M+ E ++G ++
Sbjct: 1038 --PADAIGE--SVMPVMTPTWPTRNSARVVSVSTLSVMRAELQRGADLT 1082
>gi|146093287|ref|XP_001466755.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|134071118|emb|CAM69802.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
Length = 500
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 176/362 (48%), Gaps = 29/362 (8%)
Query: 71 MEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAP 130
ME ++ LV++ ++++ A+ P+ A ++Y FGS L G+DID + +
Sbjct: 38 MENTDEVVRLVRQLLEKLLQAE---PSAA-AAWTQVYVFGSSGLDAAITGSDIDLIALCS 93
Query: 131 RHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDD 190
V+ + +F +F + + D+ V A VP+IK +++G+ +D+LFA + ++ PD
Sbjct: 94 ASVNTSFFFQTFPRSAE--GRLQDVVVVTSARVPLIKFSYNGVHVDLLFASVDMRTAPDT 151
Query: 191 MDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVP-NIENFRLALRTIKLWAKKHGIYSNV 249
+L D L + C ++NG R EI R +P ++ + LR +K WA + +Y N+
Sbjct: 152 NELLRDDFLSLVSLPCRATVNGIRTILEIRRRLPLPLDAYACVLRAVKYWAAQRQVYGNL 211
Query: 250 LGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWP----QPV-LLKKPDNVNL 304
+ GV A++VAR CQL P A + ++ FF ++ W PV ++ +N +
Sbjct: 212 YTFPNGVCLAIMVARACQLCPVADSGVILRFFFSLYVWWLLRDTRIAPVSIVPTDENAAI 271
Query: 305 GF-----PVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISED 359
P WD + AD L P++ PA P N+ V S + +E + + +
Sbjct: 272 ARVPGMPPPWDAVWDAAD---LFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCAL 328
Query: 360 IYNGKTMWDKLFETPNFFTKYRHYLVLIASS-----VSAEDQL-EWCGLIESKVRHLIGN 413
+ + L+E N ++R ++ + SS + ED + W G +ESK+R +
Sbjct: 329 V---PMSYSALWEPYNILDEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKLRMFVYA 385
Query: 414 LE 415
LE
Sbjct: 386 LE 387
>gi|71660695|ref|XP_822063.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70887456|gb|EAO00212.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 485
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 181/410 (44%), Gaps = 50/410 (12%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG T L + P DL ++ L E + V++ E +E+ + + LV + E
Sbjct: 5 YGPTKPLEVPPAQPRDLAESKRLCETMATV-VADRVREAIDLIELTA--HRLVDQITAE- 60
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
E+ + Y FGS LG +D+D + V +F F L+
Sbjct: 61 ----------PEERWVRAYPFGSCGLGASVADSDLDIVLFCSFKVTAEVFFREFPPLLQP 110
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
V V ++ V A VPV+K ++ G +D++F AL P L DD L + +
Sbjct: 111 V--VGNVVLVP-ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVARDTRH 167
Query: 209 SLNGCRVTDEILRLVP-NIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
S+NG R E+ R +P + F L+++KLWA + +Y N+ Y GV A++VARICQ
Sbjct: 168 SVNGLRTVLEVKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMVARICQ 227
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN--------------LGFP-VWDPR 312
+ P + + L+ FFL ++QW L + D ++ G P WDPR
Sbjct: 228 VMPASHPNVLLRFFFLFYTQW-------LSRHDRISPVYITTSLESRGRIPGLPDSWDPR 280
Query: 313 VNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFE 372
+ A R L+P+I PAYP N NV + + E + + N +T + ++E
Sbjct: 281 RD-ACRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYAYRL---LSNLETPLEAIWE 336
Query: 373 TPNFFTKYRHYLVLIASSVSAEDQLE------WCGLIESKVRHLIGNLER 416
+ Y + V+ + ++ W + SK+R L+ LER
Sbjct: 337 PYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER 386
>gi|308507393|ref|XP_003115880.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
gi|308256415|gb|EFP00368.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
Length = 311
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNG RV +++L VPN + F +LR IKLWAK HG+YSN +G+ GG++WA+LVAR CQLY
Sbjct: 72 LNGIRVAEQLL--VPNRDTFCQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVARTCQLY 129
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN 303
PNAA S ++ K FLVFS W WP PV+LK D V+
Sbjct: 130 PNAAPSKIIQKVFLVFSTWNWPSPVILKHFDCVD 163
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
G+ ++L PN+ D+ + L E LK E+ EE S R+ LSKLN LVK+WIK +
Sbjct: 3 GVPQPISLDTPNKNDISLSNSLNEYLKQSKCFESKEEASQRVNTLSKLNLLVKKWIKSL 61
>gi|317156627|ref|XP_001825892.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
Length = 1195
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 182/394 (46%), Gaps = 54/394 (13%)
Query: 43 LDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKV 102
L+L L LK Y ++EE++ R E L+KE + N+P +
Sbjct: 581 LNLGGIDGLKGWLKGYLAFPSNEEITQRQEAF----ELIKELVNRRD--ANLPAGTRLDL 634
Query: 103 GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK--TVDEVTDLRAVEE 160
++ GSY GV + +D+D L + V +F+ KL+ T +V LR V+
Sbjct: 635 LFEVVPVGSYGFGVWNSSSDMDILVIG--QVSPRTFFALMIAKLRRATDSDVVLLRKVKA 692
Query: 161 AFVPVIKMNFDGIEIDMLF--ARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDE 218
A ++++ G+ +D+ + A ++ P ++L D +L + + LN R
Sbjct: 693 ASGIMLELEVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHY 752
Query: 219 ILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA----A 274
+ R +P++ +FRLA R IK+WA++ GIYS+ LGYLGG+ +L+ARIC L A A
Sbjct: 753 LQRTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISA 812
Query: 275 STLVCKFFLVFSQWKWPQ-----PVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
+ ++ FF ++Q+ W + P K P PR R L+ I++
Sbjct: 813 ADIITTFFKHYAQFNWEKQVVYDPSFYKSP-----------PRYFRPQREPLV-ILSQHQ 860
Query: 330 PQQNSTFNVSI-STRTIMQEEFKQGKTISEDIYNGKTMWDKLFET-------PNFFTKYR 381
P+ N SI STRT++QE + K +S+ W++L + F YR
Sbjct: 861 PKVNVARAASIPSTRTLVQEFQRADKLLSQQ----DVTWEQLAGSIENSTGADEFLKSYR 916
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
Y A+ +++ G +K R L+G LE
Sbjct: 917 SY---------AKVNVQYWGGAATKGRMLVGWLE 941
>gi|115401228|ref|XP_001216202.1| predicted protein [Aspergillus terreus NIH2624]
gi|114190143|gb|EAU31843.1| predicted protein [Aspergillus terreus NIH2624]
Length = 1168
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 181/395 (45%), Gaps = 49/395 (12%)
Query: 43 LDLQRTR-------ELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIP 95
+D+ R R +L + L +N + EE+ R EV+ + +V + N+P
Sbjct: 545 IDISRARASLGGVEQLMQSLWDHNAFPSPEEIRQRQEVVDLIRQVVNQ------RDPNLP 598
Query: 96 PTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV--DEVT 153
+ + GSY LGV + +DID L + + +F+ KL+ E+
Sbjct: 599 TDTRLRFSFAVVPVGSYGLGVWNSSSDIDLLVIG--QLSARTFFALMVAKLRKAIHGEIK 656
Query: 154 DLRAVEEAFVPVIKMNFDGIEIDMLF--ARLALKEIPDDMDLRDDMLLKNLDQKCVRSLN 211
LR V+ A ++++ G+ +D+ + A ++ P +DL DD L + + LN
Sbjct: 657 ILRKVKAASGVMLELEARGVRVDLQYCAASRVVESWPQALDLPDDDSAFYLPMRSLLKLN 716
Query: 212 GCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPN 271
R + R +P++ FR A R IK WA++ G+YS LGYLGG+ +L++ +C+L
Sbjct: 717 PLRDMHYLQRTIPDLATFRSAYRFIKTWAQRRGVYSAKLGYLGGIHITLLLSSVCKLSFQ 776
Query: 272 AA----ASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
A A+ ++C FF ++Q++W + ++ + GF PR R ++ I+T
Sbjct: 777 KAGPLSAADMICTFFRHYAQFQWDRTIVY------DPGFYKTAPRYFRTSREPIV-ILTQ 829
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETP-------NFFTKY 380
P+ N S+ + +++EFK+ + + + + W L +F T Y
Sbjct: 830 NTPKVNVARAASLPSARTLEQEFKR---MDRQLASPEITWAGLLGAAGSSSGVEDFLTSY 886
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
Y A+ +++ G +K R L+G LE
Sbjct: 887 PSY---------AKVNVQYWGAGAAKGRLLVGWLE 912
>gi|242051340|ref|XP_002463414.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
gi|241926791|gb|EER99935.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
Length = 460
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 42/253 (16%)
Query: 42 QLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEK 101
++D +R+ L + LK + E+ R +V+ +L +V W V+ +++P +A
Sbjct: 82 EVDQRRSSSLVQFLKDEGAVPSPEDEKKREKVIRELKKIVMHWANAVAYEQSVPQGLAT- 140
Query: 102 VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVD-RADYFSSFFEKLKTVDEVTDLRAVEE 160
+ T+GSY LG H +DID LCV P + +F + L+ EV++L+ +E+
Sbjct: 141 --ATVLTYGSYTLGAHGPESDIDVLCVGPCIATLQYHFFVVLRQLLEGRPEVSELQTIEK 198
Query: 161 AFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEIL 220
A VP+++ F GI +D +A+L
Sbjct: 199 AKVPLMRFRFTGIAVDFTYAQLP------------------------------------- 221
Query: 221 RLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCK 280
++ ++ F+ LR IKLWA+K G++ + LG+ G+ A+L A +C+ +P+A+ + L
Sbjct: 222 -VIDALKKFQALLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVNGLFAV 280
Query: 281 FFLVFSQWKWPQP 293
FF F+ W W P
Sbjct: 281 FFQTFAHWPWQVP 293
>gi|443916802|gb|ELU37750.1| polymerase [Rhizoctonia solani AG-1 IA]
Length = 508
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 140/301 (46%), Gaps = 75/301 (24%)
Query: 282 FLVFSQWKWPQPVLLKKPD--------NVNLGFPVWDPRVNVADRYHLMPIITPAYPQQN 333
+L F KWPQP+LL++ + + + F VW+PRV DR HLMPIITP+YP
Sbjct: 72 YLAFR--KWPQPILLQQIEEEVKELDFSKRMNFRVWNPRV--CDRNHLMPIITPSYPSMC 127
Query: 334 STFNVSISTRTIMQEEFKQGK------------------TISEDIYNGKTMWDKLFETPN 375
ST NV+ ST ++M++EF +GK I E I + W +LF +
Sbjct: 128 STHNVTRSTMSVMKDEFMRGKFSYLLLCTDDTNNKRPGSQIVEQIMFRRAEWSELFAKHD 187
Query: 376 FFTKYRHYLVLIASSVSAEDQLEW----------------CGLIESKVRHLIGNLERNPH 419
FF KYR+YL +IASS AEDQL+W G +ES++R L+ LE
Sbjct: 188 FFQKYRYYLQIIASSGKAEDQLKWYVSPFRAWVVSEAASRSGTVESRLRQLVMKLEFVDQ 247
Query: 420 INLAH-------VNPECYTDT-TGVIANGSGSPEITAEGKEEGGENTSPPVSGV-ASMWF 470
+ +AH C D +A G SP I E ++E +P VS V + ++
Sbjct: 248 LEVAHPFIKGFEQKHYCLDDAEVRAVAQGDVSPVI--EKRKEEDMKDTPGVSEVFTTTFY 305
Query: 471 IGLDF-------------IAANVILNLTYDIQHFTNAV-HWQATQSKMMKDGMKIEVRHV 516
IG+ + L+++Y FT V W+ + ++ I VRH+
Sbjct: 306 IGMKVADKKGTEPTCLAGTSGPRKLDISYPTAEFTKQVKQWE----QYHEETHGIVVRHI 361
Query: 517 K 517
K
Sbjct: 362 K 362
>gi|389594193|ref|XP_003722343.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
gi|321438841|emb|CBZ12601.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
Length = 500
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 174/362 (48%), Gaps = 29/362 (8%)
Query: 71 MEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAP 130
ME ++ LV++ ++++ A+ P+ A ++Y FGS L G+DID + +
Sbjct: 38 MENTDEVVRLVRQLLEKMLQAE---PSAA-AAWTQVYVFGSSGLDAAITGSDIDLIALCS 93
Query: 131 RHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDD 190
V+ + +F +F + + ++ V A VP+IK +++G+ +D+LFA + ++ PD
Sbjct: 94 ASVNTSLFFQTFPRSAE--GRLQNVVVVTSARVPLIKFSYNGVHVDLLFASVDMRTAPDT 151
Query: 191 MDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVP-NIENFRLALRTIKLWAKKHGIYSNV 249
+L D L + C ++NG R EI R +P + + LR +K WA + +Y N+
Sbjct: 152 NELLRDDFLSLVSLPCRATVNGIRTILEIRRRLPLLLAAYACVLRAVKYWAAQRQVYGNL 211
Query: 250 LGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWP----QPV-LLKKPDNVNL 304
+ GV A++VAR CQL P A + ++ FF ++ W PV ++ +N +
Sbjct: 212 YTFPNGVCLAIMVARACQLCPVADSGVILRFFFSLYVWWLLRDTRIAPVSIVPMDENAAI 271
Query: 305 GF-----PVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISED 359
P WD + AD L P++ PA P N+ V S + +E + + +
Sbjct: 272 ARVPGMPPPWDAVWDAAD---LFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCAL 328
Query: 360 IYNGKTMWDKLFETPNFFTKYRHYLVLIASS-----VSAEDQL-EWCGLIESKVRHLIGN 413
+ + L+ N ++R ++ + SS + E+ + W G +ESK+R +
Sbjct: 329 V---PMSYSALWAPYNILDEHRFFVGVHISSEHQSLAACEEAINAWKGYVESKLRMFVYA 385
Query: 414 LE 415
LE
Sbjct: 386 LE 387
>gi|72386969|ref|XP_843909.1| poly(A) polymerase [Trypanosoma brucei]
gi|62359037|gb|AAX79486.1| poly(A) polymerase [Trypanosoma brucei]
gi|70800441|gb|AAZ10350.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 487
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 179/414 (43%), Gaps = 55/414 (13%)
Query: 29 YGMTTALNLSPPNQLDLQRTREL----AEC--LKPYNVSETDEELSSRMEVLSKLNNLVK 82
YG T L + P D + L AEC + P V E ++ R+ V N +
Sbjct: 5 YGPTKPLEVPRPQDHDYDESEMLYGVLAECPSISPNPVLTLVESMALRI-VQRHSQNTQE 63
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
+W + Y FGS L +D+D + P + +F F
Sbjct: 64 QW-------------------ARAYPFGSCGLSASVAESDLDVALICPSVLTTDIFFDEF 104
Query: 143 FEKL-KTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
L +V V+ V A VPV+K + G +D++F + L + P + + DD L
Sbjct: 105 PRLLYNSVGPVS----VVAARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLK 160
Query: 202 LDQKCVRSLNGCRVTDEILRLVP-NIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
+ ++ S NG R T EI R +P + F L+T+KLWA + +Y NV Y G A+
Sbjct: 161 VARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAI 220
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQ----PVLLKKPDNVNLGFP----VWDPR 312
+VAR+CQ+ P++ STL+ FFL ++QW PV L P W P
Sbjct: 221 MVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPS 280
Query: 313 VN--VADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM-WDK 369
+ D L P+I+PAYP N +V + E + + I + +T+ ++
Sbjct: 281 KDKICCD---LFPVISPAYPYVNDASSVGRCGLEALYSEITRVQCI---LTEARTLPLEE 334
Query: 370 LFETPNFFTKYRHYLVLIASSVS-----AEDQLE-WCGLIESKVRHLIGNLERN 417
++E +Y +LV+ S E L W + S++R LI ++ER+
Sbjct: 335 MWEPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERH 388
>gi|261327018|emb|CBH09993.1| poly(A) polymerase [Trypanosoma brucei gambiense DAL972]
Length = 487
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 180/414 (43%), Gaps = 55/414 (13%)
Query: 29 YGMTTALNLSPPNQLDLQRTREL----AEC--LKPYNVSETDEELSSRMEVLSKLNNLVK 82
YG T L + P D + L AEC + P V E ++ R+ V N +
Sbjct: 5 YGPTKPLEVPRPQDHDYDESEMLYGVLAECPSISPNPVLTLVESMALRI-VQRHSQNTQE 63
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
+W + Y FGS L +D+D + P + +F F
Sbjct: 64 QW-------------------ARAYPFGSCGLSAAVAESDLDVALICPSVLTTDIFFDEF 104
Query: 143 FEKL-KTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
L +V V+ V A VPV+K + G +D++F + L + P + + DD L
Sbjct: 105 PRLLYNSVGPVS----VVAARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLK 160
Query: 202 LDQKCVRSLNGCRVTDEILRLVP-NIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
+ ++ S NG R T EI R +P + F L+T+KLWA + +Y NV Y G A+
Sbjct: 161 VARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAI 220
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQ----PVLLKKPDNVNLGFP----VWDPR 312
+VAR+CQ+ P++ STL+ FFL ++QW PV L P W P
Sbjct: 221 MVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPS 280
Query: 313 VN--VADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM-WDK 369
+ D L P+I+PAYP N +V + E + + I ++ +T+ ++
Sbjct: 281 KDKICCD---LFPVISPAYPYVNDASSVGRCGLEALYSEITRVQCILTEV---RTLPLEE 334
Query: 370 LFETPNFFTKYRHYLVLIASSVS-----AEDQLE-WCGLIESKVRHLIGNLERN 417
++E +Y +LV+ S E L W + S++R LI ++ER+
Sbjct: 335 MWEPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERH 388
>gi|7108951|gb|AAF36551.1|AF201909_1 polyA polymerase [Trypanosoma brucei]
Length = 487
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 179/414 (43%), Gaps = 55/414 (13%)
Query: 29 YGMTTALNLSPPNQLDLQRTREL----AEC--LKPYNVSETDEELSSRMEVLSKLNNLVK 82
YG T L + P D + L AEC + P V E ++ R+ V N +
Sbjct: 5 YGPTKPLEVPRPQDHDYDESEMLYGVLAECPSISPNPVLTLVESMALRI-VQRHSQNTQE 63
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
+W + Y FGS L +D+D + P + +F F
Sbjct: 64 QW-------------------ARAYPFGSCGLSAAVAESDLDVALICPSVLTTDIFFDEF 104
Query: 143 FEKL-KTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN 201
L +V V+ V A VPV+K + G +D++F + L + P + + DD L
Sbjct: 105 PRLLYNSVGPVS----VVAARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLK 160
Query: 202 LDQKCVRSLNGCRVTDEILRLVP-NIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
+ ++ S NG R T EI R +P + F L+T+KLWA + +Y NV Y G A+
Sbjct: 161 VARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAI 220
Query: 261 LVARICQLYPNAAASTLVCKFFLVFSQWKWPQ----PVLLKKPDNVNLGFP----VWDPR 312
+VAR+CQ+ P++ STL+ FFL ++QW PV L P W P
Sbjct: 221 MVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPS 280
Query: 313 VN--VADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM-WDK 369
+ D L P+I+PAYP N +V + E + + I + +T+ ++
Sbjct: 281 KDKICCD---LFPVISPAYPYVNDASSVGRCGLEALYSEITRVQCI---LTEARTLPLEE 334
Query: 370 LFETPNFFTKYRHYLVLIASSVS-----AEDQLE-WCGLIESKVRHLIGNLERN 417
++E +Y +LV+ S E L W + S++R LI ++ER+
Sbjct: 335 MWEPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERH 388
>gi|154341292|ref|XP_001566599.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063922|emb|CAM40113.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 417
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 145/293 (49%), Gaps = 25/293 (8%)
Query: 142 FFEKLKTVDE--VTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLL 199
FF+KL + E + D+ V A VP+IK ++ G+ +D+LFA + ++ PD +L D L
Sbjct: 18 FFQKLPRLTEGRLQDVVVVTSARVPLIKFSYKGVHVDLLFASVDMRTAPDTSELLRDDFL 77
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVP-NIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
+ C ++NG R EI R +P ++++ LR +K WA + +Y N+ + GV
Sbjct: 78 SLVSLPCRATVNGIRTILEIRRRLPLPLDSYACVLRAVKYWAAQRQVYGNLYTFPNGVCL 137
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKW------PQPVLLKKPDNVNLGF----PV 308
A++VAR CQ P A + ++ FF ++ W P ++ K+ D + P
Sbjct: 138 AIMVARACQFCPVADSGVILRFFFSLYVWWLLRDTRMDPVSIVPKEEDAAIVRVPGMPPP 197
Query: 309 WDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWD 368
WD + AD L P++ PA P N+ V S + +E + + + + +
Sbjct: 198 WDAVWDAAD---LFPVLNPAQPTVNAAHAVGRSGLQLFFKELLRAEQLCASV---PLSYS 251
Query: 369 KLFETPNFFTKYRHYLVLIASS-----VSAEDQL-EWCGLIESKVRHLIGNLE 415
+L++ N ++R ++ + S + ED + W G +ESK+R L+ +LE
Sbjct: 252 ELWKPYNILDEHRFFVGVHISCEHPSLAACEDTINAWKGYVESKLRMLVYSLE 304
>gi|340052780|emb|CCC47065.1| putative polynucleotide adenylyltransferase [Trypanosoma vivax
Y486]
Length = 486
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 151/327 (46%), Gaps = 23/327 (7%)
Query: 105 KIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVP 164
+ Y FGS L +D+D + P V A +F F L+TV V A VP
Sbjct: 67 RAYPFGSCGLAASVADSDLDIVLFCPFKVTAAVFFHEFPLLLQTV---VGHVIVVAARVP 123
Query: 165 VIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVP 224
V+K +G +D++F +AL P L DD L + ++ S+NG R T EI R +P
Sbjct: 124 VVKFAHEGTLVDLVFVSVALAAPPTTEQLLDDSFLLQVARETRHSVNGIRFTLEIKRRLP 183
Query: 225 -NIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFL 283
+ F L+ +KLWA K +Y N+ Y GV A++VAR CQ+ P + + ++ FFL
Sbjct: 184 VTYDVFSTVLKVVKLWAMKRQVYGNLYTYPSGVVLAIMVARACQVMPASHPNVVLRFFFL 243
Query: 284 VFSQWKWPQ----PVLLKKPDNVNLGFP----VWDPRVNVADRYHLMPIITPAYPQQNST 335
++QW PV + P WDP + + L+P++ PAYP N
Sbjct: 244 FYTQWMSRHDRISPVYITTSLQGRGRVPGMPEPWDPALE-KFSHDLLPVLNPAYPFVNDA 302
Query: 336 FNVSISTRTIMQEEFKQGKTI--SEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSA 393
V + E + + + + + + +W K + + F+ + LV ++ ++
Sbjct: 303 NAVGRCGLEVFYSEVTRAHHLLSTTESFPLEDVW-KPYSITDDFSSF--LLVQVSCDGNS 359
Query: 394 EDQLE-----WCGLIESKVRHLIGNLE 415
E+ +E W + SK+R LI +E
Sbjct: 360 EEGVENDLEVWSSYVASKLRILIYAVE 386
>gi|53136848|emb|CAG32753.1| hypothetical protein RCJMB04_34p17 [Gallus gallus]
Length = 109
Score = 117 bits (292), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/101 (54%), Positives = 72/101 (71%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G Q YG+T+ ++L+ P + D T++L E LKPY V E +EEL R+ +L KLN
Sbjct: 9 GSQTQQLQKHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLN 68
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHK 119
NLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH K
Sbjct: 69 NLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTK 109
>gi|413936469|gb|AFW71020.1| hypothetical protein ZEAMMB73_643504 [Zea mays]
Length = 388
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++LS P + L +T E+ + L + E +E R EVL KL+ VK WIK+
Sbjct: 148 HGVTEPISLSGPTEKYLMQTDEVEKYLSDARLYERQDEAILREEVLGKLDQTVKAWIKKA 207
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK-LK 147
+ + K +TFGSY LGVH ADID LCV PRH R +YF + L
Sbjct: 208 TRINGYGEQFVHEANAKTFTFGSYCLGVHGPDADIDTLCVGPRHATRNEYFFRWLHDILA 267
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDL 193
+ EV++L V +A VPV+ +G+ ID+L+A LA IP+ ++
Sbjct: 268 EMPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPESREI 313
>gi|334121414|ref|ZP_08495483.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
gi|333455032|gb|EGK83696.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
Length = 1034
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 157/355 (44%), Gaps = 55/355 (15%)
Query: 109 FGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKM 168
GS R+GV +D+D +C+ P + + +L + + + L V+ A VPV++M
Sbjct: 635 IGSGRIGVQSTHSDLDLICIIPVPLTGETFLKQVQNRLAGLCDRSQL--VKSARVPVLRM 692
Query: 169 NFDGIEIDMLFAR-LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLV-PNI 226
+G+ +D+L A + +I + + + D + G D I+ +V P++
Sbjct: 693 EIEGVAVDLLSATTMGQSQIIEPLS---EAARPFFDAASWSAAVGILEADLIVDIVSPHL 749
Query: 227 --ENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVA--------------RICQLYP 270
+ F LR ++ WAK I+ N G+LG SWA+L A R+
Sbjct: 750 SWDLFTNLLRAVRTWAKARQIHGNAWGFLGNFSWALLTAWTSIQCGDITPDSPRLLHSQE 809
Query: 271 N----AAAS-------------TLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRV 313
N A S L+ FF + SQ W QP+ L + +PV R
Sbjct: 810 NDGFVGAVSPCPPCLRDDQLLDILLAHFFQILSQHDWTQPIALTEGGK---QYPVRKSR- 865
Query: 314 NVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFET 373
P+IT P QNST NV+ ST I++ E +G I+E++ G T W LFE+
Sbjct: 866 ------EWFPVITSIEPCQNSTRNVTRSTAEILRRELGRGAEIAEEVLAGNTAWTTLFES 919
Query: 374 PNFFTKYRHYLVLIASSVSAEDQLEWC-GLIESKVRHLIGNLERNPHINLAHVNP 427
+ + +LVL SS +LE C G +E L NLE+ +I HV P
Sbjct: 920 ADLPEQSNAFLVLTVSSAEV-GELEKCGGWLEGNTIGLAINLEQKLNI---HVRP 970
>gi|222623746|gb|EEE57878.1| hypothetical protein OsJ_08540 [Oryza sativa Japonica Group]
Length = 253
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 114/270 (42%), Gaps = 71/270 (26%)
Query: 168 MNFDGIEIDMLFARLALKEIPDDMD--LRDDMLLKNLDQ-KCVRSLNGCRVTDEILRLVP 224
M F G+++D+++A + L P D +L+ LD RSLNG RV DEILRLVP
Sbjct: 1 MRFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVP 60
Query: 225 NIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLV 284
FR LR +K WAK G+YSNV G+LGG+ WA+LVAR+CQLYPN + +
Sbjct: 61 ETAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPACCSRASSAA 120
Query: 285 FSQWKWPQPVLLK--KPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSIST 342
P V+L+ + D+ LG R HL
Sbjct: 121 LRGGSGPARVMLRAIEHDDGELGL-----------RRHL--------------------- 148
Query: 343 RTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGL 402
+ E+ G + ++I M W G
Sbjct: 149 -RVTTEQLAVGDDVCQEIVKAGAM--------------------------------WVGW 175
Query: 403 IESKVRHLIGNLERNPH-INLAHVNPECYT 431
+ES++R L +E + + L H++P+ Y
Sbjct: 176 VESRLRQLSARVEADTSGVLLCHLHPQAYA 205
>gi|224088990|ref|XP_002308592.1| predicted protein [Populus trichocarpa]
gi|222854568|gb|EEE92115.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 47/213 (22%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P A YG+ ++++ P + DL R EL + + Y S
Sbjct: 7 PNGTAAKRYGIMKPISVAGPTEPDLHRNAELEKQRRGYEERRCSGPYRS----------- 55
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFS 140
+W+K ++ + + E+ I+TFGSYRLGVH GADID LCV P +V+R
Sbjct: 56 --DWVKRLTRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNR----- 108
Query: 141 SFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLK 200
+L ++EVT+L+ V +A VP D+D+ + +L
Sbjct: 109 ----ELAEMEEVTELQPVPDAHVP-------------------------DLDISNGSVLY 139
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLAL 233
+D++ VRSLNGCRV D+IL+LVPN+E L++
Sbjct: 140 EVDEQTVRSLNGCRVADQILKLVPNVEYASLSV 172
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 29/200 (14%)
Query: 364 KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINL- 422
K W LFE FF Y++YL + + A D L W G +ES++R L +ER+ L
Sbjct: 215 KEQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDTDGMLQ 274
Query: 423 AHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVIL 482
H P Y D + A+ + ++EG V+G G F +
Sbjct: 275 CHPYPNEYIDPSKQCAHCAF---FMGLQRKEG-------VTGQE-----GQQFDIRGTVD 319
Query: 483 NLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQN 542
DI + + W K GM I V HV+++QL ++ K+ + ++ +Q
Sbjct: 320 EFRQDINMY---LPW--------KPGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHVNQQ 368
Query: 543 TSAKKRKSDQALDELGDKSR 562
T+ + D A + G R
Sbjct: 369 TN--RTSEDVARSQSGSAER 386
>gi|297597453|ref|NP_001043998.2| Os01g0702900 [Oryza sativa Japonica Group]
gi|222619129|gb|EEE55261.1| hypothetical protein OsJ_03164 [Oryza sativa Japonica Group]
gi|255673599|dbj|BAF05912.2| Os01g0702900 [Oryza sativa Japonica Group]
Length = 129
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Query: 168 MNFDGIEIDMLFARLALKEIPDDMD--LRDDMLLKNLDQ-KCVRSLNGCRVTDEILRLVP 224
M F G+++D+++A + L P D +L+ LD RSLNG RV DEILRLVP
Sbjct: 1 MRFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVP 60
Query: 225 NIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAS 275
FR LR +K WAK G+YSNV G+LGG+ WA+LVAR+CQLYPN + +
Sbjct: 61 ETAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 111
>gi|125527403|gb|EAY75517.1| hypothetical protein OsI_03421 [Oryza sativa Indica Group]
Length = 129
Score = 112 bits (280), Expect = 7e-22, Method: Composition-based stats.
Identities = 54/111 (48%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Query: 168 MNFDGIEIDMLFARLALKEIPDDMD--LRDDMLLKNLDQ-KCVRSLNGCRVTDEILRLVP 224
M F G+++D+++A + L P RD +L+ LD SLNG RV DEILRLVP
Sbjct: 1 MRFRGVQVDLVYAGVCLPWCPTTWSGPQRDRSVLRGLDDLATAHSLNGIRVADEILRLVP 60
Query: 225 NIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAS 275
FR LR + WAK G+YSNV G+LGG+ WA+LVAR+CQLYPN + +
Sbjct: 61 ETAMFRTMLRCVNHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 111
>gi|327357117|gb|EGE85974.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 1251
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 174/411 (42%), Gaps = 72/411 (17%)
Query: 51 LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEW-IKEVSIAKNIPPTVAEKVGGKIYTF 109
L CL ++ + E+ R S L NL++ + E K I ++ + T
Sbjct: 628 LKVCLADKSIVPSSEDAEKRKAAFSLLKNLIQHGSLPESGKGKEID---QPRLSIVVTTV 684
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVEEAFVPVIK 167
GSY LGV +D+D LCV + +F ++LK E V LR V+ A +++
Sbjct: 685 GSYGLGVWTDSSDVDCLCVG--SISSKVFFELTLQRLKKGAEWDVKILRKVKAATGTMLE 742
Query: 168 MNFDGIEIDMLFAR--------LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEI 219
+ + ++ D+ + L + +P L D LL + L R +
Sbjct: 743 LEINSVKFDLQYCPAAAVAERWLEVPHLPRSSPLFDLALLP------LMKLQPYRDQAYL 796
Query: 220 LRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST--- 276
R VPN FRL R IK WAK GIYS+ GYLGG+ M+++++ +L P+ A +T
Sbjct: 797 QRTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPATSAA 856
Query: 277 -LVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA-DRYHLMP-----IITPAY 329
++C FF + + W + V+ +DP + RYH P I+T
Sbjct: 857 DILCTFFNYYGNFNWKEDVM-------------YDPSFHKKPPRYHRTPQEGMVILTLHA 903
Query: 330 PQQNSTFNVSI-STRTIMQEEFKQGKTISEDIYNGKTMWDKL-------------FETPN 375
P N + SI STRTI+ E + ISE G T W +L
Sbjct: 904 PVMNVARSASIPSTRTIVDEMKRADNLISE----GNTNWAELVGIVANTGKSSLSVSGDE 959
Query: 376 FFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVN 426
F Y Y+ + +++ GL +K L+G LE + LA ++
Sbjct: 960 FLRSYNSYIKI---------NVQYWGLSLAKGSSLVGWLESRCLVLLADLH 1001
>gi|261191320|ref|XP_002622068.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239589834|gb|EEQ72477.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
Length = 1266
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 174/411 (42%), Gaps = 72/411 (17%)
Query: 51 LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEW-IKEVSIAKNIPPTVAEKVGGKIYTF 109
L CL ++ + E+ R S L NL++ + E K I ++ + T
Sbjct: 628 LKVCLADKSIVPSSEDAEKRKAAFSLLKNLIQHGSLPESGKGKEID---QPRLSIVVTTV 684
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVEEAFVPVIK 167
GSY LGV +D+D LCV + +F ++LK E V LR V+ A +++
Sbjct: 685 GSYGLGVWTDSSDVDCLCVG--SISSKVFFELTLQRLKKGAEWDVKILRKVKAATGTMLE 742
Query: 168 MNFDGIEIDMLFAR--------LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEI 219
+ + ++ D+ + L + +P L D LL + L R +
Sbjct: 743 LEINSVKFDLQYCPAAAVAERWLEVPHLPRSSPLFDLALLP------LMKLQPYRDQAYL 796
Query: 220 LRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA----AS 275
R VPN FRL R IK WAK GIYS+ GYLGG+ M+++++ +L P+ A A+
Sbjct: 797 QRTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPVTSAA 856
Query: 276 TLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA-DRYHLMP-----IITPAY 329
++C FF + + W + V+ +DP + RYH P I+T
Sbjct: 857 DILCTFFNYYGNFNWKEDVM-------------YDPSFHKKPPRYHRTPQEGMVILTLHA 903
Query: 330 PQQNSTFNVSI-STRTIMQEEFKQGKTISEDIYNGKTMWDKL-------------FETPN 375
P N + SI STRTI+ E + ISE G T W +L
Sbjct: 904 PVMNVARSASIPSTRTIVDEMKRADNLISE----GNTNWAELVGIVANTGKSSLSVSGDE 959
Query: 376 FFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVN 426
F Y Y+ + +++ GL +K L+G LE + LA ++
Sbjct: 960 FLRSYNSYIKI---------NVQYWGLSLAKGSSLVGWLESRCLVLLADLH 1001
>gi|349805727|gb|AEQ18336.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 183
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 65/86 (75%), Gaps = 7/86 (8%)
Query: 203 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
D +C+RSLNGCRVTDEIL LVPN NFR LR IKLWAK+ GIYS LGG SWAMLV
Sbjct: 1 DIRCIRSLNGCRVTDEILHLVPN--NFRSTLRAIKLWAKRRGIYS-TFRILGG-SWAMLV 56
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQW 288
AR CQLY NA ASTLV KF++ S W
Sbjct: 57 ARTCQLY-NAIASTLVHKFYV--SMW 79
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
Query: 466 ASMWFIGLDF----IAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQL 521
SMWF+G++F +V ++LT+DIQ FT+ V+ QA M+K GMKIE HVKKKQL
Sbjct: 76 VSMWFLGINFKKIESTESVNIDLTHDIQSFTDTVYRQANIINMLKKGMKIEATHVKKKQL 135
Query: 522 SEYL 525
YL
Sbjct: 136 HYYL 139
>gi|294888316|ref|XP_002772423.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239876612|gb|EER04239.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 113
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 75/110 (68%), Gaps = 4/110 (3%)
Query: 252 YLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLL---KKPDNVNL-GFP 307
+ GG++WA+LVAR+CQ++PN + LV +FFL+ S+W W PV L ++ + L F
Sbjct: 1 FFGGITWAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFK 60
Query: 308 VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTIS 357
VW+P+ +DR HLMP+ITPA+P NST+NV+ +T+ I+ E ++ ++
Sbjct: 61 VWNPKQYASDRSHLMPVITPAFPSMNSTYNVTETTKRIIMGEIERAHKLT 110
>gi|300123436|emb|CBK24709.2| unnamed protein product [Blastocystis hominis]
Length = 363
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 180/383 (46%), Gaps = 60/383 (15%)
Query: 161 AFVPVIKMNFDGIEIDMLFARLALK--EIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDE 218
+FVP++ M DG+ +D+ FA L ++P+ +D+ + +L+N+ + + SL GCR T+
Sbjct: 6 SFVPIMTMEIDGVSVDISFASLPSYPFKLPEFLDILSNDILRNVSEHTLHSLTGCRCTEF 65
Query: 219 I---LRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAS 275
+ LR ++ FR I+ + K++ IY NV+GYLGGV+ +L+A L + +
Sbjct: 66 VIQKLRSENKLDIFRQTFFGIRFFTKQYKIYKNVMGYLGGVNITILLASTNLLENDFLTN 125
Query: 276 TLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPV-------WDPRVNVADRYHLMPIITPA 328
T F F ++ P L FP W + + + + ++TP
Sbjct: 126 TF---HFFHFVADHLGSEIIAMTP---QLSFPELGFDEENWSDKPSNFSNHDSLVLLTPT 179
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDI---YNGKTMWDKLFETPNFFTKYRHYL- 384
YP+ N+ +S R+ +Q Q + + E I +G++ ++ E FF + Y
Sbjct: 180 YPRMNTARTIS---RSSLQFIRSQARRVYEKIKSYVDGESTLLQMVEPYQFFEGFPIYFE 236
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSP 444
VL+++S ++E + +W GL+ESK+R+L+ L + I +NP I + S S
Sbjct: 237 VLVSASANSEFK-DWLGLVESKIRYLVFFL--SLRIENVALNP-------NPIVSKSNSN 286
Query: 445 EITAEGKEEGGENTSPPVSGVASMWFIGLDF-IAANVILNLTYDIQHFTNAVHWQATQSK 503
A+ ++IGL + L+L+ + F + V Q Q K
Sbjct: 287 ---------------------AACFYIGLTVDLTKATTLDLSQCVNDFIDIVRLQ--QPK 323
Query: 504 MMKDGMKIEVRHVKKKQLSEYLP 526
+ G++I R + K+L E +P
Sbjct: 324 TARLGLRIRYRE-ELKELKETIP 345
>gi|440789896|gb|ELR11187.1| EGFlike domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 904
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 105/191 (54%), Gaps = 25/191 (13%)
Query: 244 GIYSNVLGYLGGVSWAMLVARICQ---LYPNAAAST-----------LVCKFFLVFSQWK 289
G+YSN +G+LGG SW++LVA +C+ LY +AA+ L+ +FF V++ W
Sbjct: 693 GLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDLSIEERLLAEFFEVYNHWD 752
Query: 290 WPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEE 349
W QPV + P + R + MPI+TP P NS NV+ ST T MQ+E
Sbjct: 753 WQQPVAIT-PGSA---------RYKPGHKSDKMPIVTPTPPFNNSARNVARSTLTEMQQE 802
Query: 350 FKQGKTISED-IYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVR 408
F + I++ +N + + L + NFF Y +YL++ S+S+++ + G +ES++
Sbjct: 803 FFRAFDITQAPQWNSEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDEVTKCLGWLESRLI 862
Query: 409 HLIGNLERNPH 419
LI +LE+NP
Sbjct: 863 ALIFDLEKNPQ 873
>gi|340501019|gb|EGR27841.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 306
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 110/196 (56%), Gaps = 25/196 (12%)
Query: 202 LDQKCVRSLNGCRVTDEILRLV----PNIE----NFRLALRTIKLWAKKHGIYSNVLGYL 253
+DQK ++S+NG R IL V PN E F+ AL+ IK+WA+ +GIY N LG+L
Sbjct: 1 MDQKDIKSINGFRSNQAILEYVSEKNPNPEIAKSRFKDALKVIKIWARHNGIYDNRLGFL 60
Query: 254 GGVSWAMLVARICQLYPNAAASTLVCKFFLVF-SQWKWPQPVLLKKPDNVNLGFPVWDPR 312
G+S A+++A+I QL+PN + ++ +FF F S+W W KK D V LG + +
Sbjct: 61 SGISLAIMLAKILQLFPNLEVNGIIKQFFQTFASRWDW------KKMD-VQLGSRSEEMK 113
Query: 313 VNV-ADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIY--NGKTM-WD 368
V + + + M IITPAYP+ N+T V + I+ K I+ + Y N K + W+
Sbjct: 114 VQMQSQQRKCMHIITPAYPEYNTTDRVKMINFNII-----VAKLIASNDYIQNQKNIVWE 168
Query: 369 KLFETPNFFTKYRHYL 384
K+ E NF Y+ ++
Sbjct: 169 KIVEKENFINHYKLFI 184
>gi|253747873|gb|EET02347.1| Hypothetical protein GL50581_387 [Giardia intestinalis ATCC 50581]
Length = 609
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 51 LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE---------VSIAKNIPPTVAEK 101
L LK + + EE + +L L ++ +W+ E + + P +
Sbjct: 39 LLSYLKDCKLYVSPEEARKKEAILRTLELIISDWVYETYKDAFMANMQFYRKQPNMPRSE 98
Query: 102 VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEA 161
++Y FGSY LG++ +D+D + V P++V AD+F F + + +V+ + +A
Sbjct: 99 RLVRLYPFGSYYLGINEPSSDVDTVVVFPQYVRIADFFDKFPTIIGQMPQVSYFDCIRDA 158
Query: 162 FVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILR 221
VP+I + +D I+ D+ A +A+ I D + D N+ +K + SLNG R +
Sbjct: 159 KVPLITLTYDSIDFDLSAAVMAVNRITDAIPFLDPECTANMHEKSILSLNGYRTNIHVKS 218
Query: 222 LVPN----IENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
F+ A+R ++LW+K+ IYSN G+ GG++ +LVA +
Sbjct: 219 QFAGNNAFYNTFQNAVRALRLWSKRKNIYSNRCGFFGGINCIILVANV 266
>gi|301087134|gb|ADK60784.1| nucleic acid binding protein [Arachis diogoi]
gi|301087263|gb|ADK60848.1| putative nucleic acid binding protein, partial [Arachis diogoi]
Length = 74
Score = 106 bits (264), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 54/72 (75%)
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
A+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGF VWDPR N DR
Sbjct: 3 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPRDR 62
Query: 319 YHLMPIITPAYP 330
H MPIITPAYP
Sbjct: 63 THHMPIITPAYP 74
>gi|342180300|emb|CCC89777.1| putative polynucleotide adenylyltransferase [Trypanosoma congolense
IL3000]
Length = 356
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 20/263 (7%)
Query: 173 IEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIEN-FRL 231
+ +D++F +AL + P L DD L + + S+NG R T E+ R +P F
Sbjct: 1 MSVDVVFISVALSQPPTSDQLLDDSFLLQVARDTRPSVNGIRFTFEVRRRLPVPHKVFAT 60
Query: 232 ALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWP 291
L+ +K WA + +Y N+ Y G +A++VAR+CQ+ P+ S L+ FFL ++QW
Sbjct: 61 VLKAVKFWAMRRQVYGNIYTYPNGAVFAIMVARVCQVLPSPYPSVLLRFFFLFYTQWMSR 120
Query: 292 Q----PVLLKKPDNVNLGFP----VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTR 343
PV L P W P N R L P+I+PAYP N NV
Sbjct: 121 HDHISPVYLTATLESRGRIPGLPESWKPAKNECFR-DLFPVISPAYPYVNDASNVGRCGL 179
Query: 344 TIMQEEFKQGKTISEDIYNGKTM-WDKLFETPNFFTKYRHYLVLIASSVS-----AEDQL 397
+ E Q + + I T+ +KL+ + H+L++ SS+ AE L
Sbjct: 180 ESLYSEITQAQRV---ISASDTLSLEKLWRPYCIMEDFAHFLLVEVSSLGDDMADAERIL 236
Query: 398 -EWCGLIESKVRHLIGNLERNPH 419
W + SK+R LI ++ER H
Sbjct: 237 GRWGSYVGSKLRFLIYSVERFVH 259
>gi|159109295|ref|XP_001704913.1| Hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
gi|157432988|gb|EDO77239.1| hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
Length = 674
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 51 LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE---------VSIAKNIPPTVAEK 101
L LK + + EE + +L L ++ +W+ E + + P +
Sbjct: 96 LLSYLKNCKLYVSSEETRKKEAILRNLELIISDWVYETYKDAFLANMQFYRKQPNMPRSE 155
Query: 102 VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEA 161
++Y FGSY LG++ +D+D + + P++V AD+F F + + +V+ + +A
Sbjct: 156 RLVRLYPFGSYYLGINEPSSDVDTVVIFPQYVRIADFFDKFPTIIGQMPQVSYFDCIRDA 215
Query: 162 FVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILR 221
VP+I + +D ++ D+ A +A+ + D + D N+ +K + SLNG R +
Sbjct: 216 KVPLITLTYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRTNIHVKS 275
Query: 222 LVP--NI--ENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
NI F+ A+R ++LW K+ IYSN G+ GG++ +LVA +
Sbjct: 276 QFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCIILVANV 323
>gi|7108953|gb|AAF36552.1|AF201910_1 polyA polymerase [Trypanosoma cruzi]
Length = 304
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 18/261 (6%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG T L + P DL ++ L E + V++ E +E+ + + LV + E
Sbjct: 5 YGPTKPLEVPPAQPRDLAESKRLCETMATV-VADRVREAIDLIELTA--HRLVDQITAE- 60
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
E+ + Y FGS LG +D+D + V +F F L+
Sbjct: 61 ----------PEERWVRAYPFGSCGLGASVADSDLDIVLFCSFKVTAEVFFREFPPLLQP 110
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVR 208
V V ++ V A VPV+K ++ G +D++F AL P L DD L + +
Sbjct: 111 V--VGNVVLVP-ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVARDTRH 167
Query: 209 SLNGCRVTDEILRLVP-NIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
S+NG R E+ R +P + F L+++KLWA + +Y N+ Y GV A++VARICQ
Sbjct: 168 SVNGLRTVLEVKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMVARICQ 227
Query: 268 LYPNAAASTLVCKFFLVFSQW 288
+ P + + L+ FFL ++QW
Sbjct: 228 VMPASHPNVLLRFFFLFYTQW 248
>gi|258563048|ref|XP_002582269.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907776|gb|EEP82177.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1040
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 181/417 (43%), Gaps = 67/417 (16%)
Query: 27 VTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIK 86
+T T+A L+P D L CL+ + T+ ++S R V+ L +++ +
Sbjct: 594 MTVASTSASFLTPTKLFD---RHSLELCLRESMMLPTEADVSKRQSVVDLLRDVITQGPA 650
Query: 87 EVS---IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFF 143
+ N P +A + GSY LGV +DID L + P + +F+
Sbjct: 651 ARAGDGSGNNPEPNIAMV----LVPVGSYGLGVWSPSSDIDCLVIGP--ISSKTFFAVAE 704
Query: 144 EKLKTVDE--VTDLRAVEEAFVPVIKMNFDGIEIDMLFA----------RLALKEIPDDM 191
++L+ + + LR V+ A ++++ +GI+ D+ + R++L PDD
Sbjct: 705 KRLRKATDLGIRILRRVKAATGTMLELEVEGIKCDLQYCPASRVVEAWQRISLLP-PDDS 763
Query: 192 DLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLG 251
L + + L R D I R +P++ FR A R I LWAK+ GIY G
Sbjct: 764 TF-------YLSSQALTKLQAFRDVDYIRRSIPDLAAFRAAHRFITLWAKRRGIYLARFG 816
Query: 252 YLGGVSWAMLVARICQLYPNAAAST---LVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPV 308
YLGG+ M+++R+C+L +T ++C+FF ++ + W + +L + F
Sbjct: 817 YLGGIHITMMLSRVCKLSCRKGGATSMDMICRFFKYYTNFDWEREIL------CDPSFFK 870
Query: 309 WDPRVNVADRY--HLMPIITPAYPQQNSTFNVS-ISTRTIMQEEFKQGKTISEDIYNGKT 365
PR RY M I+T P N + S STRTI++E + + E I
Sbjct: 871 DAPRYR---RYANEPMVILTIHTPLVNIARSASKASTRTIIKEL----QRMDELISTPDM 923
Query: 366 MWDKLF-------ETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
W L + F Y Y+ + +++ G+I +K L+G LE
Sbjct: 924 SWSGLVGNITASDSSQEFLKTYTSYIKI---------HVQYWGMILAKGSTLLGWLE 971
>gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
Length = 973
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 134/314 (42%), Gaps = 25/314 (7%)
Query: 104 GKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFV 163
G ++ GS R+G GAD+D + P VD AD + L + T +R V A V
Sbjct: 618 GVVHVVGSRRMGCALAGADLDLVAALPGGVDLADVRARVTAALP---DGTRVRQVTGARV 674
Query: 164 PVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLV 223
P +++ +++D++ + + + R LDQ +L+ D + V
Sbjct: 675 PGLRLRTGDLDVDLVVVATGTLDPGEAVARR-----AELDQAAAIALSAVSDADAVRAAV 729
Query: 224 PNIEN-FRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFF 282
+ F R +K WA G+ S G L G++W++L AR + ++AA L+ FF
Sbjct: 730 GDHHTAFTRLARQVKAWAGARGLDSAPFGGLPGLAWSVLAARTAREATDSAAPDLLRHFF 789
Query: 283 LVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSIST 342
++ W W PV L P PV ++TP P +N T V
Sbjct: 790 GTWAAWDWRDPVGL-APTGTGPHTPV--------------VLMTPTDPVRNCTGQVGAGF 834
Query: 343 RTIMQEEFKQGKTISEDIYNGKT-MWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCG 401
R ++ +E + TI E + T W +L P+ ++ + VL AE+ E G
Sbjct: 835 RDLLTDELYRAWTILETAADADTNPWPELLSPPSLHRRHAAWAVLTVRPGPAEEFEETSG 894
Query: 402 LIESKVRHLIGNLE 415
+ ++R L+ LE
Sbjct: 895 RVRGRLRALLTALE 908
>gi|367022686|ref|XP_003660628.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
gi|347007895|gb|AEO55383.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
Length = 1260
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 178/439 (40%), Gaps = 39/439 (8%)
Query: 53 ECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSY 112
E L V ++ E + R L L ++V + + PTV + GSY
Sbjct: 638 EALAALQVIPSEGEATKRKRALDLLKSVVLDTPSADAAGARSQPTVV------VVPVGSY 691
Query: 113 RLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDG 172
LGV +DID LC+ P + +S + + LR V ++++ G
Sbjct: 692 ALGVWTSSSDIDVLCIGPFSSNTFFALASQRVRKAAAQGIKLLRRVRAHTGTMLELEVHG 751
Query: 173 IEIDMLFARLA--LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFR 230
+++D+ + A + PD + + + +L + + L R D + R VP++ FR
Sbjct: 752 VKVDLQYCPAASVAERWPDVLRIPSSDPVWSLSAQTLSKLKAIRDADYLRRSVPDLTTFR 811
Query: 231 LALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAS-----TLVCKFFLVF 285
LA R +K WAK GIY+ G+L G+ ++L+AR+ +L A + L+ FF +
Sbjct: 812 LAHRFVKTWAKSRGIYAARFGFLSGIQISVLLARVQKLLAREAGAPPTPEALIVTFFHHY 871
Query: 286 SQWKWPQPVLLKKPDNVNLGF-PVWDPRVNVADRYHLMPIITPAY--PQQNSTFNVSIST 342
+ + W + L F P++ R R P+ Y P N+ S+ +
Sbjct: 872 AAFDW----------SAQLAFDPLFHRRRLPYSRTAREPLAILGYFPPALNTALAASVPS 921
Query: 343 RTIMQEEFKQGKTISEDIYNGKTMWDKLFETP----NFFTKYRHYLVLIAS--SVSAEDQ 396
+ EF++ + W L F Y+ Y+ L +S
Sbjct: 922 TKTLAAEFRRASDALRSATDPPASWSSLLSVSAGRDEFLAAYKSYVKLDVQYWGLSLSRG 981
Query: 397 LEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGS-GSPEITAEGKEEGG 455
++ G +ES+ L+ +L R + P + + +NGS + T G+E+ G
Sbjct: 982 AQFLGWLESRCVMLLVDLHRRAPGLHVRMWPARFVERD---SNGSRDAAAATMTGEEKDG 1038
Query: 456 ENTSPPVSGVASMWFIGLD 474
+ + G + IGLD
Sbjct: 1039 DEDARDFRGC---YLIGLD 1054
>gi|392870452|gb|EAS32255.2| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1241
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 178/410 (43%), Gaps = 53/410 (12%)
Query: 31 MTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV----KEWIK 86
+ T NLS + LDL CL+ +++ T E++S R VL L N++ +
Sbjct: 612 LATPANLSDKHDLDL--------CLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVD 663
Query: 87 EVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
E + N P + + GSY LGV +D+D L + P + +F+ ++L
Sbjct: 664 ENGHSNNEP-----DIAMVLVPVGSYGLGVWSPSSDVDCLSIGP--ISSKIFFAIAEQRL 716
Query: 147 KTVDE--VTDLRAVEEAFVPVIKMNFDGIEIDMLF---ARLALKEIPDDMDLRDDMLLKN 201
+ + + LR V+ A +I++ +GI+ D+ + AR+ + DD + +
Sbjct: 717 RRAADSGIRILRKVKAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF-D 775
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
L + + L R D I R +P++ FR A R I WAK G+Y + GYLGG+ M+
Sbjct: 776 LSYQALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMM 835
Query: 262 VARICQLYPN---AAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
++R+ +L+ ++ ++ +FF ++ + W + P + R
Sbjct: 836 LSRVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHKTVFD---------PFFFESTPRYRR 886
Query: 319 Y--HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFE---- 372
Y M I+T P N + S RTI++E + + +S+ W KL
Sbjct: 887 YANEPMVILTINVPLINVARATAGSARTIVEELRRMAQLMSDP----DMTWSKLLNSTVS 942
Query: 373 ----TPNFFTKYRHYLVLIAS--SVSAEDQLEWCGLIESKVRHLIGNLER 416
+ F T Y Y+ + +S G +ES+ L+ +++R
Sbjct: 943 TLEPSEEFLTAYSSYIKIHVQYWGISLAKGKTLLGWLESRCVRLLNDIDR 992
>gi|308160310|gb|EFO62803.1| Poly(A) polymerase, putative [Giardia lamblia P15]
Length = 617
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 51 LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE---------VSIAKNIPPTVAEK 101
L LK + + EE + +L L ++ +W+ E + + P +
Sbjct: 39 LLSYLKDCKLYVSPEETRKKEAILRNLELIISDWVYETYKDAFLANMQFYRKQPNMPRSE 98
Query: 102 VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEA 161
++Y FGSY LG++ +D+D + + P++V D+F F + + +V+ + +A
Sbjct: 99 RLVRLYPFGSYYLGINEPSSDVDTVVIFPQYVRIVDFFDKFPTIIGQMPQVSYFDCIRDA 158
Query: 162 FVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILR 221
VP+I + +D ++ D+ A +A+ + D + D N+ +K + SLNG R +
Sbjct: 159 KVPLITLTYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRTNIHVKS 218
Query: 222 LVP--NI--ENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
NI F+ A+R ++LW K+ IYSN G+ GG++ +LVA +
Sbjct: 219 QFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCIILVANV 266
>gi|320039014|gb|EFW20949.1| hypothetical protein CPSG_02791 [Coccidioides posadasii str.
Silveira]
Length = 1241
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 184/425 (43%), Gaps = 53/425 (12%)
Query: 31 MTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV----KEWIK 86
+ T NLS + LDL CL+ +++ T E++S R VL L N++ ++
Sbjct: 612 LATPANLSDKHDLDL--------CLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVE 663
Query: 87 EVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
E + N P + + GSY LGV +D+D L + P + +F+ ++L
Sbjct: 664 ENGHSDNEP-----DIAMVLVPVGSYGLGVWSPSSDVDCLSIGP--ISSKIFFAIAEQRL 716
Query: 147 KTVDE--VTDLRAVEEAFVPVIKMNFDGIEIDMLF---ARLALKEIPDDMDLRDDMLLKN 201
+ + + LR V+ A +I++ +GI+ D+ + AR+ + DD + +
Sbjct: 717 RRAADSGIRILRKVKAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF-D 775
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
L + + L R D I R +P++ FR A R I WAK G+Y + GYLGG+ M+
Sbjct: 776 LSYQALTKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMM 835
Query: 262 VARICQLYPN---AAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
++R+ +L+ ++ ++ +FF ++ + W + P + R
Sbjct: 836 LSRVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHETVFD---------PFFFESTPRYRR 886
Query: 319 Y--HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFE---- 372
Y M I+T P N + S RTI++E + + +S+ W KL
Sbjct: 887 YANEPMVILTINVPLINVARATAGSARTIVEELRRMAQLMSDP----DMTWSKLLNSTVS 942
Query: 373 ----TPNFFTKYRHYLVLIAS--SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVN 426
+ F T Y Y+ + +S G +ES+ L+ +++R A +
Sbjct: 943 TLEPSEEFLTAYSSYIKIHVQYWGISLAKGKMLLGWLESRCVRLLNDIDRKLPSIYARIW 1002
Query: 427 PECYT 431
P ++
Sbjct: 1003 PARFS 1007
>gi|303317898|ref|XP_003068951.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108632|gb|EER26806.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1241
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 184/425 (43%), Gaps = 53/425 (12%)
Query: 31 MTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV----KEWIK 86
+ T NLS + LDL CL+ +++ T E++S R VL L N++ ++
Sbjct: 612 LATPANLSDKHDLDL--------CLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVE 663
Query: 87 EVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
E + N P + + GSY LGV +D+D L + P + +F+ ++L
Sbjct: 664 ENGHSDNEP-----DIAMVLVPVGSYGLGVWSPSSDVDCLSIGP--ISSKIFFAIAEQRL 716
Query: 147 KTVDE--VTDLRAVEEAFVPVIKMNFDGIEIDMLF---ARLALKEIPDDMDLRDDMLLKN 201
+ + + LR V+ A +I++ +GI+ D+ + AR+ + DD + +
Sbjct: 717 RRAADSGIRILRKVKAATGTMIELEVNGIKCDLHYCPAARVVEGWQRISLSPPDDPIF-D 775
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
L + + L R D I R +P++ FR A R I WAK G+Y + GYLGG+ M+
Sbjct: 776 LSYQALTKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMM 835
Query: 262 VARICQLYPN---AAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
++R+ +L+ ++ ++ +FF ++ + W + P + R
Sbjct: 836 LSRVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHETVFD---------PFFFESTPRYRR 886
Query: 319 Y--HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFE---- 372
Y M I+T P N + S RTI++E + + +S+ W KL
Sbjct: 887 YANEPMVILTINVPLINVARATAGSARTIVEELRRMAQLMSDP----DMTWSKLLNSTVS 942
Query: 373 ----TPNFFTKYRHYLVLIAS--SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVN 426
+ F T Y Y+ + +S G +ES+ L+ +++R A +
Sbjct: 943 TLEPSEEFLTAYSSYIKIHVQYWGISLAKGKMLLGWLESRCVRLLNDIDRKLPSIYARIW 1002
Query: 427 PECYT 431
P ++
Sbjct: 1003 PARFS 1007
>gi|351701159|gb|EHB04078.1| Poly(A) polymerase alpha [Heterocephalus glaber]
Length = 298
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 63/83 (75%)
Query: 37 LSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPP 96
LS P + + T++L E LKP+ V E +EEL R+ +L KLNNLVKEWI+E+S +KN+P
Sbjct: 73 LSTPKETNWVLTQKLNETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQ 132
Query: 97 TVAEKVGGKIYTFGSYRLGVHHK 119
+V E VGGK++TFGSYRLGVH K
Sbjct: 133 SVIENVGGKMFTFGSYRLGVHTK 155
>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
Length = 771
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 183/451 (40%), Gaps = 98/451 (21%)
Query: 3 FTQHSNSMQTSKPHQDGKPQSQAPVTYGMTTAL---------NLSPPNQLDLQRTRE--- 50
F S+SM T G ++ + ++Y M L N+ P LD +R +
Sbjct: 222 FPNRSSSMIT------GLHKTASELSYQMDNQLVQTVISEIDNICPICHLDFERNDQVKI 275
Query: 51 LAECLKPYNVSETDE--ELSSRMEVLSKLNNLV------------KEWIKEVSIAKNIPP 96
+ EC Y++ D+ +L SR + +K L KE+I+ ++ +
Sbjct: 276 MPECYHTYHIDCIDQWLKLKSRCPMCNKNPKLALKMDKYKQAKISKEFIERQNLKQEFIN 335
Query: 97 TVAE-------KVGGKIYTFGS-----------YRLGVHHKGADIDALCVAPRHVDRADY 138
+ E + I +GS Y L + +K D+ C + +
Sbjct: 336 GLRECIIQILNECDYLILQYGSSFLMAETQESDYDLILVNKLNDLQQTCENSDLIRQQFL 395
Query: 139 FSSFFEKLKTVDEVTDLR--AVEEAFVPVIKMNF-DGIEIDMLFARLA-LKEIPDDMDLR 194
F E+L + +L ++ A VP++KM + I ID+ A + +E + ++
Sbjct: 396 FEKLAEQLNMNFTIKNLEIFKIKHAKVPILKMKYKQQINIDLSLAIVCNTEEKLSQISIQ 455
Query: 195 DDMLLKNLDQKCVRSLNGCRVTDEILRLVP----NIENFRLALRTIKLWAKKHGIYSNVL 250
+ +L N + S+N + EI LV N E F L L+ +K WA++ +Y
Sbjct: 456 NYLLFDNQSE---VSINAVIQSQEIKNLVAGCNVNFELFGLCLQHVKTWAQRRKVYGQQY 512
Query: 251 GYLGGVSWAMLVARICQLYPN----------------AAASTLVCKFFLVFSQWKWPQPV 294
GYLGG+++A+L A I Q Y N + KFF +S W+WP P+
Sbjct: 513 GYLGGIAFAILCANIVQAYQNDDKFMCYLNDPNIKHKQKLKYFLLKFFKFYSSWEWPNPI 572
Query: 295 LLKKP--DNVNLGFP-----------VWDPRVNVADRYHLMPIITP--------AYPQQN 333
+L + D NL P +W+P + D HLMPII+P N
Sbjct: 573 ILDQGFYDQENLLNPNGQQVKMNVKKIWNPISCIGDSQHLMPIISPQIKINTQKTITSTN 632
Query: 334 STFNVSISTRTIMQEEFKQGKTISEDIYNGK 364
+ V S I EFK+ I + IY GK
Sbjct: 633 TADQVLNSNLQIYLYEFKRAYKIMKKIYKGK 663
>gi|402083981|gb|EJT78999.1| hypothetical protein GGTG_04090 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1263
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 179/435 (41%), Gaps = 77/435 (17%)
Query: 45 LQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSI-------AKNIPPT 97
L+ + L + L T++E + R E L +L+ E + A+ PP
Sbjct: 614 LEDVQLLRDSLSALGAFPTEDEAARRQEAFELLRDLILENPTGTEVTDGASAAARPRPPL 673
Query: 98 VAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTD--- 154
V + + GSY LGV +DID +C+ P Y S+ F L V +
Sbjct: 674 V-------VTSVGSYGLGVWTPSSDIDVMCIGP-------YSSAVFMAL-AVQRIRKAGA 718
Query: 155 -----LRAVEEAFVPVIKMNFDGIEIDMLF--ARLALKEIPDDMDLRDDMLLKNLDQKCV 207
+R V ++++ G+++D+ + A + P +D + +L + +
Sbjct: 719 RGFKLVRRVRANTGTMLELEVQGVKMDLQYCAATSVAEGWPAVLDRPASDPVFSLPAQTL 778
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
L R D + R +P++ FRLA R ++ WA+ GIYS GYLGG+ ++L+AR+C+
Sbjct: 779 GKLKAARDLDYLRRSLPDLAKFRLAHRAVRTWARTRGIYSVRFGYLGGIQISVLLARVCK 838
Query: 268 -----LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGF-PVWDPRVNVADRYHL 321
P + + ++ FF ++ + W Q NL F P + + R
Sbjct: 839 SLARDAGPGLSVADILVTFFHHYAAFDWQQ----------NLAFDPFFHNKKLSYHRTFR 888
Query: 322 MPIITPAY--PQQNSTFNVSISTRTIMQEEFKQGKTI--SEDIYNGKTMWDKLFE----- 372
P+ + P N++ +I + M EF++ + SED+ WD F
Sbjct: 889 EPLAILGFFPPMLNTSHAATIPSVRAMAGEFRRAAALLASEDV-----TWDAFFRGGGPT 943
Query: 373 -------------TPNFFTKYRHYLVLIAS--SVSAEDQLEWCGLIESKVRHLIGNLERN 417
+F Y+ ++ L S +S ++ G ES+ ++ ++ R
Sbjct: 944 TVPGPLSATLPSGAADFLASYKSFVKLELSYWGISLPRGAQFVGWFESRCPLILVDVSRR 1003
Query: 418 PHINLAHVNPECYTD 432
LA + PE + D
Sbjct: 1004 LPNVLARMWPERFVD 1018
>gi|239612757|gb|EEQ89744.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 1266
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 172/411 (41%), Gaps = 72/411 (17%)
Query: 51 LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEW-IKEVSIAKNIPPTVAEKVGGKIYTF 109
L CL ++ + E+ R S L NL++ + E K I ++ + T
Sbjct: 628 LKVCLADKSIVPSSEDAEKRKAAFSLLKNLIQHGSLPESGKGKEID---QPRLSIVVTTV 684
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVEEAFVPVIK 167
GSY LGV +D+D LCV + +F ++LK E V LR V+ A +++
Sbjct: 685 GSYGLGVWTDSSDVDCLCVG--SISSKVFFELTLQRLKKGAEWDVKILRKVKAATGTMLE 742
Query: 168 MNFDGIEIDMLFAR--------LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEI 219
+ + ++ D+ + L + +P L D LL + L R +
Sbjct: 743 LEINSVKFDLQYCPAAAVAERWLEVPHLPRSSPLFDLALLP------LMKLQPYRDQAYL 796
Query: 220 LRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST--- 276
R VPN FRL R IK WAK GIYS+ GYLGG+ M+++++ +L P+ A +
Sbjct: 797 QRTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPAPSAA 856
Query: 277 -LVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA-DRYHLMP-----IITPAY 329
++C FF + + W + V+ +DP + YH P I+T
Sbjct: 857 DILCTFFNYYGNFNWKEGVM-------------YDPSFHKKPPLYHRTPQEGMVILTLHA 903
Query: 330 PQQNSTFNVSI-STRTIMQEEFKQGKTISEDIYNGKTMWDKL-------------FETPN 375
P N + SI STRTI+ E + ISE G T W +L
Sbjct: 904 PVMNVARSASIPSTRTIVDEMKRADNLISE----GNTNWAELVGIVANTGKSSLSVSGDE 959
Query: 376 FFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVN 426
F Y Y+ + +++ GL +K L+G LE + LA ++
Sbjct: 960 FLRSYNSYIKI---------NVQYWGLSLAKGSSLVGWLESRCLVLLADLH 1001
>gi|296421816|ref|XP_002840460.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636676|emb|CAZ84651.1| unnamed protein product [Tuber melanosporum]
Length = 1241
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 12/190 (6%)
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVE--EAFVPVIK 167
GSY LGVH + +DID LCV+ + +F ++++ +R ++ VPV++
Sbjct: 688 GSYALGVHGRDSDIDCLCVS--TISAKTFFEVARKRIRRFGGERGIRLTRFVDSKVPVLE 745
Query: 168 MNFDGIEIDMLFAR-LALKEIPDDMDLR--DDMLLKNLDQKCVRSLNGCRVTDEILRLVP 224
+ I+ D+ + + LA+ E + L +D + +L ++SLN R T+ +LR +P
Sbjct: 746 VKVGNIKFDLQYCQSLAIIEHWSAIPLLPPNDSVF-SLPASGLKSLNSYRDTEFLLRTIP 804
Query: 225 NIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY----PNAAASTLVCK 280
NI FRLA R IK+WA G++S+ GYLGG +L+ARIC+L + A+ +V
Sbjct: 805 NINVFRLAHRFIKIWALASGVFSSRFGYLGGFHITLLLARICKLADGDPKDVTAAKIVRL 864
Query: 281 FFLVFSQWKW 290
FF +S+ +W
Sbjct: 865 FFAYYSKTEW 874
>gi|294867702|ref|XP_002765194.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
gi|239865189|gb|EEQ97911.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
Length = 602
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 133/319 (41%), Gaps = 74/319 (23%)
Query: 106 IYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVT----DLRAVEEA 161
+ FGS + + +DID + + V R+ Y + L ++ D + ++
Sbjct: 98 LLVFGSTLMEITTPTSDIDTVVLV-SDVKRSAYMKRVQKVLTEMEPFRSYCDDFSLLADS 156
Query: 162 FVPVIKMNFDGIEIDMLFARL---ALKEIPDDMDLRDDMLLKN----------------- 201
VP IK ++ G +D+ FA L LKE D + +
Sbjct: 157 LVPYIKCSYRGYPVDVQFAVLPSTVLKECHDAIQAEVHRVCTAGLLEPEGSAAADWSNSL 216
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+D +RSLNG RV +L+ P + +R+ LR +K+WAK GIYSNV+GY GGV+WA+L
Sbjct: 217 VDDATIRSLNGVRVGRYLLKRTPVLAVYRVVLRFVKMWAKARGIYSNVMGYFGGVTWAIL 276
Query: 262 VARICQLYPNA----------AASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGF----- 306
V+++ Q NA A ++ KFF S W + D + GF
Sbjct: 277 VSKVMQ--DNAELAMRETEEDAVREILLKFFDFCSTHPWGSENPVTANDEILNGFVSAGS 334
Query: 307 -PVWDPRV-------NVADRY------------------------HLMPIITPAYPQQNS 334
++ P +V D+ M ++TP P QNS
Sbjct: 335 VEMYTPPARDIFGDDDVVDKQLAPQHVLRDPAECPYAADGVGIEGQCMVVLTPVLPTQNS 394
Query: 335 TFNVSISTRTIMQEEFKQG 353
+FN R +M +EFK+
Sbjct: 395 SFNALDFNRYVMVQEFKRA 413
>gi|310792019|gb|EFQ27546.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
M1.001]
Length = 1198
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 193/469 (41%), Gaps = 84/469 (17%)
Query: 45 LQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGG 104
L T L +C++ V T+++ ++R E L L ++ + + + PTV
Sbjct: 581 LSDTAALRQCMENLEVFPTEQDETTRKEALQLLRQILLDSDQANADQTRGRPTVM----- 635
Query: 105 KIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVEEAF 162
+ GSY LG + +DID LC+ + +F+ ++L+ E V LR V+
Sbjct: 636 -LVPVGSYGLGTWSRTSDIDCLCIG--SISPRIFFTLARQRLRKSGESGVRLLRKVKAKT 692
Query: 163 VPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLK-------NLDQKCVRSLNGCRV 215
++++ GI+ D+ + + P +D DML + +L + + L R
Sbjct: 693 GTMLEVEVMGIKCDLQYC-----QAPSVVDQWPDMLKRPPSDPAFSLPMQTLLKLKPARD 747
Query: 216 TDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPN---- 271
+ R +P++ FR++ + IK WAK GIY+ GYLGG+ ++++ ++C++
Sbjct: 748 LFYLQRSIPDLAQFRVSFQAIKTWAKSRGIYAAKFGYLGGIHLSVMLVKVCKMLLRVGGV 807
Query: 272 AAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMP-----IIT 326
+A ++ FF +S++ W V V+DP + RYH P ++
Sbjct: 808 VSAVDIITTFFDHYSRFDWQNDV-------------VFDPFFHKNLRYHRTPREAMCLLG 854
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPN----------- 375
P N+ S+ T I+ E T + W L P+
Sbjct: 855 WHSPTLNTALIASVPTVKIISAELCHAAT---QLSGDGASWQSLLSIPDSSQDRNMTPSA 911
Query: 376 --FFTKYRHYLVLIAS--SVSAEDQLEWCGLIESKVRHLIGNLERN-PHINLAHVNPECY 430
F YR ++ L S E G +ES+ L+ ++ R P ++ A + P +
Sbjct: 912 SKFLGSYRSFVNLRIHYWGASLERGSRLVGWLESRCASLLVDINRRVPELS-ARIWPARF 970
Query: 431 TDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN 479
D+ +T E E G+ + IGLD++ ++
Sbjct: 971 VDS------------LTPEADETRGD--------YQGSYLIGLDWMNSD 999
>gi|385300970|gb|EIF45209.1| poly polymerase [Dekkera bruxellensis AWRI1499]
Length = 122
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 77/120 (64%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
S P YG+T ++++ P+ +++ + E L+ N ET++ + R +VL+ L +V+
Sbjct: 3 STQPKHYGVTPPVSIASPSPEEVKMNDAMIEELRNQNSFETEDGVQKRRKVLATLQTIVQ 62
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
E++ VS KN+ +++ GGK++TFGSYRLGV+ G+DID L V P+HV + D+F+ F
Sbjct: 63 EFVYTVSRKKNMSEGMSKDAGGKLFTFGSYRLGVYGPGSDIDTLVVVPKHVTKEDFFTVF 122
>gi|384498736|gb|EIE89227.1| hypothetical protein RO3G_13938 [Rhizopus delemar RA 99-880]
Length = 281
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 128/250 (51%), Gaps = 24/250 (9%)
Query: 109 FGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKM 168
FGS+ LG + K ++ V P + R+D+F F E LK E++ +
Sbjct: 43 FGSFGLGGYIKNDVVELALVCPYQIHRSDFFKFFPELLK-----------EQSLI----- 86
Query: 169 NFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTD-EILRLVP-NI 226
+ IE+++ F RL L+ + ++ D+ LL+++D + +++G R+ ++ P N+
Sbjct: 87 --NNIEVNISFIRLKLERVTHRINFLDNSLLQDMDDASLATMDGPRLNQFNKSQIKPSNV 144
Query: 227 ENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVAR---ICQLYPNAAASTLVCKFFL 283
F+++L+ IK WA + G+Y+ +GYL + +L+ + Q + + ++ FF
Sbjct: 145 RLFQVSLQCIKYWAIQRGLYNAEIGYLNETACTLLLIKTFMFIQSKEKLSITIILQNFFQ 204
Query: 284 VFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTR 343
++S+W W PV+L G + + + + +MPII+P YP + T V+ T+
Sbjct: 205 MWSKWPWKTPVILTNHIPDKNGNKLEYSSITGSQK-AMMPIISPCYPVYSVTPYVTKLTQ 263
Query: 344 TIMQEEFKQG 353
+Q EF++G
Sbjct: 264 KTIQLEFERG 273
>gi|380475493|emb|CCF45225.1| endonuclease/Exonuclease/phosphatase [Colletotrichum higginsianum]
Length = 1195
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 180/426 (42%), Gaps = 66/426 (15%)
Query: 51 LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFG 110
L C++ N+ T++ + R E L L + + + + P + + G
Sbjct: 584 LRRCMENLNIFPTEQNEAVRKEALQLLQHTLLDSDQTTGDQTRGRPAIM------LVPVG 637
Query: 111 SYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVEEAFVPVIKM 168
SY LG + +DID LC+ + +F ++L+ V LR V+ ++++
Sbjct: 638 SYGLGTWSRTSDIDCLCIG--SISPRVFFILARQRLRKSGNPGVRLLRKVKAKTGTMLEV 695
Query: 169 NFDGIEIDMLFARLALKEIPDDMDLRDDMLLK-------NLDQKCVRSLNGCRVTDEILR 221
G++ D+ + + P ++ DML + +L + + L R + R
Sbjct: 696 EILGVKCDLQYC-----QAPSVVEQWPDMLKRPPSDPAFSLPMQTLLKLKPARDLFYLQR 750
Query: 222 LVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ--LYPNAAAST--L 277
VP++ FR++ + IK WAK GIY+ GYLGG+ ++++ ++C+ L+ ST +
Sbjct: 751 SVPDLAQFRMSFQAIKTWAKARGIYAAKFGYLGGIHLSVMLVKVCKMLLHDGGVVSTADI 810
Query: 278 VCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMP-----IITPAYPQQ 332
+ FF +SQ W + + V+DP + +YH P ++ P
Sbjct: 811 ITTFFDHYSQLDWQRDM-------------VFDPFFHKNLKYHRTPREAMCLLGWHSPTL 857
Query: 333 NSTFNVSISTRTIMQEEFKQGKT-ISEDIYNGKTMWDKLFETP-------------NFFT 378
N+ S+ T I+ E Q T +S D T W L P NF
Sbjct: 858 NTALTASVPTTKIISAELCQATTQLSRD----GTSWQSLLSIPDSSHSKNMTPGASNFLG 913
Query: 379 KYRHYLVLIAS--SVSAEDQLEWCGLIESKVRHLIGNL-ERNPHINLAHVNPECYTDTTG 435
+R ++ L S E G +ES+ L+ ++ +R P ++ A + P + D++
Sbjct: 914 SFRSFINLRVHYWGASLERGSRLVGWLESRCASLLVDVNKRVPELS-ARIWPARFVDSSS 972
Query: 436 VIANGS 441
A G+
Sbjct: 973 SEAKGT 978
>gi|115448957|ref|NP_001048258.1| Os02g0771500 [Oryza sativa Japonica Group]
gi|113537789|dbj|BAF10172.1| Os02g0771500, partial [Oryza sativa Japonica Group]
Length = 91
Score = 95.9 bits (237), Expect = 6e-17, Method: Composition-based stats.
Identities = 40/65 (61%), Positives = 50/65 (76%)
Query: 211 NGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYP 270
+G RV DEILRLVP+ FR LR +K WAK G+YSNV G+LGG+ WA+LVAR+CQLYP
Sbjct: 9 HGIRVADEILRLVPDTAAFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYP 68
Query: 271 NAAAS 275
N + +
Sbjct: 69 NTSPA 73
>gi|242810869|ref|XP_002485671.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218716296|gb|EED15718.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 1206
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 157/333 (47%), Gaps = 30/333 (9%)
Query: 59 NVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHH 118
N+ ++EE + R ++ + + V + + + ++ + + + GSY LGV
Sbjct: 603 NMIPSEEEFAHRHQMFKLIESAVHQRVFDATVETRL------NISFVVVPVGSYGLGVWD 656
Query: 119 KGADIDALCVAPRHVDRADYFSSFFEKLKTVD--EVTDLRAVEEAFVPVIKMNFDGIEID 176
+DID L + + + + +KL+ + E+ LR ++ A ++++ G+ D
Sbjct: 657 TSSDIDCLVIGT--ISPRTFMALMVQKLRRPEWQEIHILRKIKAASGTMLELQAGGVGFD 714
Query: 177 MLF--ARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALR 234
+ + A + P ++L +L + + LN R + + R +P++ FR A R
Sbjct: 715 LQYCAATSVAESWPKALELPSSDSTFDLPMQSLLKLNAVRDLEYLQRTIPDLATFRKAYR 774
Query: 235 TIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST----LVCKFFLVFSQWKW 290
IK WAK GIYS+ LGYLGG+ +L+A +C+L + +T ++C FF ++ + W
Sbjct: 775 FIKAWAKCRGIYSSKLGYLGGIHITLLLALVCKLSFRESGATHESDILCTFFSYYAHFDW 834
Query: 291 PQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEF 350
++ + + +P+ + + R L+ I++ P+ N ++ + ++EEF
Sbjct: 835 KNDLVY------DTTYYTVEPKYHRSSREPLV-ILSIHPPKVNVAHASTVPSVKTLEEEF 887
Query: 351 -KQGKTIS------EDIYNGKTMWDKLFETPNF 376
+ + IS EDI ++ L P++
Sbjct: 888 DRANRLISKAGVSWEDIAGQTGIYQFLNAYPSY 920
>gi|119186269|ref|XP_001243741.1| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1172
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 131/272 (48%), Gaps = 28/272 (10%)
Query: 31 MTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV----KEWIK 86
+ T NLS + LDL CL+ +++ T E++S R VL L N++ +
Sbjct: 612 LATPANLSDKHDLDL--------CLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVD 663
Query: 87 EVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL 146
E + N P + + GSY LGV +D+D L + P + +F+ ++L
Sbjct: 664 ENGHSNNEP-----DIAMVLVPVGSYGLGVWSPSSDVDCLSIGP--ISSKIFFAIAEQRL 716
Query: 147 KTVDE--VTDLRAVEEAFVPVIKMNFDGIEIDMLF---ARLALKEIPDDMDLRDDMLLKN 201
+ + + LR V+ A +I++ +GI+ D+ + AR+ + DD + +
Sbjct: 717 RRAADSGIRILRKVKAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF-D 775
Query: 202 LDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
L + + L R D I R +P++ FR A R I WAK G+Y + GYLGG+ M+
Sbjct: 776 LSYQALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMM 835
Query: 262 VARICQLYPN---AAASTLVCKFFLVFSQWKW 290
++R+ +L+ ++ ++ +FF ++ + W
Sbjct: 836 LSRVFKLFCGEVRVTSTDMIYRFFQYYADFDW 867
>gi|452004284|gb|EMD96740.1| hypothetical protein COCHEDRAFT_1220308 [Cochliobolus
heterostrophus C5]
Length = 1226
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 149/343 (43%), Gaps = 39/343 (11%)
Query: 45 LQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGG 104
L + +++ L+ + + DE+ + R E + L +V + ++ ++ P V
Sbjct: 609 LTDSSDMSSALEVHGMIPNDEQTTQRQEAFALLQRIVSDTSEDAETGQSGIPLV------ 662
Query: 105 KIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVD--EVTDLRAVEEAF 162
I GSY LGV +DID LC+ + +F ++L +V LR VE A
Sbjct: 663 -IVPVGSYALGVWTSSSDIDCLCIG--SISSKTFFKLARQRLVKAGNPQVRILRKVEAAT 719
Query: 163 VPVIKMNFDGIEIDMLFARLA--------LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCR 214
+++++ +GI +D+ + A L EIP D + NL +R L R
Sbjct: 720 GTMLELSINGILMDLQYCPAAQVVERWSELAEIP----ASDPIF--NLSMLSLRKLKPYR 773
Query: 215 VTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAA 274
+ R +P+ FR A R IKLWA + G+Y+ GYLGG+ ++++ +C+ +
Sbjct: 774 DLLYLQRTIPSRSIFRQAYRLIKLWAVQRGLYAAKFGYLGGMHITLMLSWVCKSLAHNVG 833
Query: 275 ST----LVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYP 330
S +V FF ++ + W ++ + F PR N + R P++ ++
Sbjct: 834 SVSIADIVVSFFQHYANFDWSNDMVY------DAFFHKKKPRYNRSAR---EPMVILSFH 884
Query: 331 QQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFET 373
NS F ST +Q K+ K + W K F T
Sbjct: 885 APNSNF-AQKSTVPGLQTLIKELKAADMKLSEPGMTWQKFFST 926
>gi|212536855|ref|XP_002148583.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
gi|210068325|gb|EEA22416.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
Length = 1206
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 177/392 (45%), Gaps = 33/392 (8%)
Query: 55 LKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRL 114
L +++ ++ E++ R ++ L++ +K+ +I ++ + + + GSY
Sbjct: 599 LHDFDMLPSEVEIAHRQQMF----ELIRSAVKQQAIGTSVETRL--NISFVVVPVGSYAS 652
Query: 115 GVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVD--EVTDLRAVEEAFVPVIKMNFDG 172
GV +DID L + + + + +KL+ + E+ LR V+ ++++ G
Sbjct: 653 GVWDPSSDIDCLVIGS--ISPKTFMALMVQKLRRPEWQEIHILRKVKATSGTMLEIQAGG 710
Query: 173 IEIDMLF--ARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFR 230
+ D+ + A P + L +L + + LN R + + R +P++ FR
Sbjct: 711 VRFDLQYCAATSVTDSWPKALTLPSSDPTFDLPMQSLLKLNSHRDLEYLQRTIPDLATFR 770
Query: 231 LALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST----LVCKFFLVFS 286
A R IK WAK GIYS+ LGYLGG+ +L+AR+C+L A +T ++ FF +
Sbjct: 771 KAYRFIKAWAKFRGIYSSKLGYLGGIHITLLLARVCKLSFREAGATSVSDIISDFFFYYE 830
Query: 287 QWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIM 346
+ W ++ + F P+ + R M I++ P+ N ++S+ +
Sbjct: 831 NFDWKNDMVYETT------FYTGTPKYHRLSR-EPMVILSIHPPKVNVAHASTVSSVHTL 883
Query: 347 QEEFKQGKTISEDIYNGKTMWDKLFE---TPNFFTKYRHYLVLIAS--SVSAEDQLEWCG 401
++EFK+ + ++ G T W + + F Y Y+ + + +A G
Sbjct: 884 EQEFKRAAQLISEV--GAT-WKNIADPSGVVQFLEAYSSYIKVDVHYWAKAAAKGRALFG 940
Query: 402 LIESKVRHLIGNLERN-PHINLAHVNPECYTD 432
+E + L+ N+ R P I+ A + P +TD
Sbjct: 941 WLEFRCVSLLVNINRGFPDIH-ARIWPARFTD 971
>gi|389628670|ref|XP_003711988.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|351644320|gb|EHA52181.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|440474755|gb|ELQ43479.1| DUF455 domain-containing protein [Magnaporthe oryzae Y34]
gi|440487378|gb|ELQ67170.1| DUF455 domain-containing protein [Magnaporthe oryzae P131]
Length = 1238
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 167/378 (44%), Gaps = 55/378 (14%)
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVD-----EVTDLRAVEEAFVP 164
GS+ LGV +DID LC+ P + + +F+ +++K E+ LR V
Sbjct: 668 GSWGLGVSTLSSDIDCLCIGP--LSSSTFFALTTQRIKKASVESGLEIKLLRRVRANSGV 725
Query: 165 VIKMNFDGIEIDMLF--ARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRL 222
++++ + +D+ + A ++ P + L + + L + + L R D +
Sbjct: 726 MLELEVMSVRVDLQYCAATAVAEQWPAVLKLPPNDPIFALPAQTLGKLKALRDLDYLRET 785
Query: 223 VPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPN-----AAASTL 277
+P++ FRLA R IK WA+ GIYS GYLGG+ ++L+AR+C+L + +
Sbjct: 786 IPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLARVCKLLARDYGQEVSVPDI 845
Query: 278 VCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY--PQQNST 335
+ FF ++ + W + P + ++N R P+ + P N+T
Sbjct: 846 LSSFFSHYASFDWRNKIAFD---------PFFHKKLNYL-RSAREPLAILGFFPPALNTT 895
Query: 336 FNVSI-STRTIMQEEFKQGKTISEDIYNGKTMWDKLF---------------ETPNFFTK 379
++ S + I +E + + ++ED G T WD F +F +
Sbjct: 896 LAATVPSMKAIARELSQANELLNED---GMT-WDTFFGASSAGGDKTHSLARGAADFLSS 951
Query: 380 YRHY--LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERN-PHINLAHVNPECYTDTTGV 436
Y+ + + L +S ++ G +ES+ L+ ++ R P +N + P+ + +
Sbjct: 952 YKSFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSRRLPQLNF-RIWPQRFVEQV-- 1008
Query: 437 IANGSGSPEITAEGKEEG 454
+G PE + +G ++G
Sbjct: 1009 ---DAGEPEASNDGDDQG 1023
>gi|154282695|ref|XP_001542143.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410323|gb|EDN05711.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1178
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 171/387 (44%), Gaps = 59/387 (15%)
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGK-----IYTFGSYRLGVHHKGADIDALCVAPRHVD 134
L+K I++ S+++ P+ E++G + T GS LGV + +DID LCV +
Sbjct: 614 LLKHIIQDGSLSE---PSNGEEIGRSKFSIVVTTVGSSGLGVWTESSDIDCLCVG--SIS 668
Query: 135 RADYFSSFFEKLKT-VD-EVTDLRAVEEAFVPVIKMNFDGIEIDMLF---ARLALK--EI 187
+F ++L+ +D V +R V+ AF ++++ +GI+ D+ + A +A + E+
Sbjct: 669 ANVFFELIIQRLRNRIDLGVKIIRRVKPAFGTMLELEINGIKFDLQYCPAAAVAKRWLEV 728
Query: 188 PDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYS 247
P+ L L NL L R + R + N FRL R IK WAK GIYS
Sbjct: 729 PN---LPQSSPLFNLSLIPRMKLQPYRDQAYLQRTIRNPATFRLLHRIIKGWAKYRGIYS 785
Query: 248 NVLGYLGGVSWAMLVARICQLYP--NAAASTLVCKFFLVFSQWKWPQ-----PVLLKKPD 300
+ GYLGG+ ++++R+ +L P +A+ ++C FF + + W + P+ +KP
Sbjct: 786 SRFGYLGGIHITLMLSRLMKLLPPNPGSAADILCTFFNHYGNFNWEKDAVYDPIFHEKP- 844
Query: 301 NVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDI 360
PR N M I T P N + SI + + +E K+ + + I
Sbjct: 845 ----------PR-NYRPPREGMIIFTLHTPIINVARSTSIPSMRKIVDEMKRAENL---I 890
Query: 361 YNGKTMWDKLF-------------ETPNFFTKYRHYLVLIAS--SVSAEDQLEWCGLIES 405
G W +L F Y Y+ + S+S G +ES
Sbjct: 891 SEGNANWAELLGVYPKPGKSALSSSADEFLKSYNSYIKINVQYWSLSLAKGSSLVGWVES 950
Query: 406 KVRHLIGNLERN-PHINLAHVNPECYT 431
+ L+ +L R P I A + P +T
Sbjct: 951 RCLDLLNDLYREFPDIQ-ARIWPARFT 976
>gi|225561466|gb|EEH09746.1| DUF455 domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 1256
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 169/382 (44%), Gaps = 49/382 (12%)
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGK-----IYTFGSYRLGVHHKGADIDALCVAPRHVD 134
L+K I++ S+++ P+ E++G + T GS LGV + +DID LCV+ +
Sbjct: 655 LLKHIIQDSSLSE---PSNGEEIGRSKFSIVVTTVGSSGLGVWTESSDIDCLCVS--SIS 709
Query: 135 RADYFSSFFEKLKT-VD-EVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALK-----EI 187
+F ++L+ +D V +R V+ AF ++++ +GI+ D+ + A E+
Sbjct: 710 ANVFFELIIQRLRNRIDLGVKIIRRVKPAFGTMLELEINGIKFDLQYCPAAAVAERWLEV 769
Query: 188 PDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYS 247
P+ L L NL L R + R + N FRL R IK WAK GIYS
Sbjct: 770 PN---LPQSSPLFNLSLIPRMKLQPYRDQAYLQRTIQNPATFRLLHRIIKGWAKYRGIYS 826
Query: 248 NVLGYLGGVSWAMLVARICQLYP--NAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLG 305
+ GYLGG+ ++++R+ +L P +A+ ++C FF + + W + + D + G
Sbjct: 827 SRFGYLGGIHITLMLSRLMKLLPPNPGSAADILCTFFNHYGNFNWGKDAVY---DPIFHG 883
Query: 306 FPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKT 365
P PR N M I T P N + SI + + +E K+ + + I G
Sbjct: 884 KP---PR-NYRPPREGMIIFTLHTPIINVARSTSIPSMRKIVDEMKRAENL---ISEGNA 936
Query: 366 MWDKLF-------------ETPNFFTKYRHYLVLIAS--SVSAEDQLEWCGLIESKVRHL 410
W +L F Y Y+ + S+S G +ES+ L
Sbjct: 937 NWAELLGIYPKTGKSALSSSADEFLKSYNSYIKINVQYWSLSLAKGSSLVGWVESRCLDL 996
Query: 411 IGNLERN-PHINLAHVNPECYT 431
+ +L R P I A + P +T
Sbjct: 997 LDDLYREFPDIQ-ARIWPARFT 1017
>gi|344249366|gb|EGW05470.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 63
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 49/61 (80%)
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF KY+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60
Query: 382 H 382
+
Sbjct: 61 Y 61
>gi|340521883|gb|EGR52117.1| predicted protein [Trichoderma reesei QM6a]
Length = 1224
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 186/429 (43%), Gaps = 53/429 (12%)
Query: 50 ELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTF 109
EL CL VS SS E+ ++ +L+K + + S A++ + +V +
Sbjct: 609 ELKGCL----VSSGQFPASSDAELRNEAISLLKTTLLD-SDAESAGNSTRSQVQLVVIPV 663
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK--TVDEVTDLRAVEEAFVPVIK 167
GS+ LGV +D+D LCV ++ +F+ +KL+ + + + LR V+ +++
Sbjct: 664 GSFGLGVWTSSSDVDCLCVG--NISSRTFFALAIQKLRKASANGIKILRRVKANSGTMLE 721
Query: 168 MNFDGIEIDMLFARLAL--KEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPN 225
+ GI+ D+ + A + P+ + L + + L R + R +P+
Sbjct: 722 LEIRGIKFDLQYCSAAAIAQGYPEVFKRPSSDPIFALPLQSLAKLKPARDLFYLRRSIPD 781
Query: 226 IENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPN--AAAST--LVCKF 281
+ +R+A IK WAK G+Y+ G LGG+ ++ +C+ N AAST ++ F
Sbjct: 782 MTKYRVAHLVIKAWAKSRGLYAAKFGLLGGIHITSMLVPVCKALANEPEAASTADVLTSF 841
Query: 282 FLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM---PIITPAY--PQQNSTF 336
F +S + W V V+DP + RYH P+ + P N+
Sbjct: 842 FHHYSTFDWATGV-------------VYDPFYHTELRYHRTFREPLCLLGWHGPSLNTAS 888
Query: 337 NVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLF-----ETP---------NFFTKYRH 382
+ SIST + EF + T+ + W K E+P +F YR
Sbjct: 889 SASISTVNALASEFTRAATL---LSQEGMTWSKFLGVEQSESPSSLLEKGAADFLDSYRT 945
Query: 383 YLVLIASSVSAEDQ--LEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANG 440
Y+ + A + Q ++ G +ES++ ++ ++ R + + P +TD +N
Sbjct: 946 YIKISARYWGSSQQKGRKYLGWLESRLISILVDISRKSPGIVPRIWPARFTDEEQSSSNT 1005
Query: 441 SG-SPEITA 448
+PE+TA
Sbjct: 1006 DAENPELTA 1014
>gi|429200719|ref|ZP_19192393.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
gi|428663602|gb|EKX62951.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
Length = 985
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 153/373 (41%), Gaps = 44/373 (11%)
Query: 85 IKEVSIAKNIPPTVAEKV-GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFF 143
+ + ++A I P + E + G ++ GS R+G GAD+D + P V+ A +
Sbjct: 619 VADTAVADRIIPGITEALPDGVVHVVGSRRMGCALPGADLDLVAALPGTVELAAVQA--- 675
Query: 144 EKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLD 203
E K + E D+R V A VP +++ D +++D++ + + +D R L
Sbjct: 676 ELSKALPEAADVREVVGARVPGLRLRLDRLDVDLVVVATGSMDPAEAVDRR-----VELG 730
Query: 204 QKCVRSLNGCRVTDEILRLV-PNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
+ +L+ D +L + F R +K WA+ G+ S G L G++W++L
Sbjct: 731 EAAAVALSAVSDADAVLASAGAHGPAFARLARQVKAWARARGLDSAPFGGLPGLAWSVLA 790
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM 322
AR + L+ FF ++ W W P V A + H +
Sbjct: 791 ARTAGEAGDLPPYDLLRHFFATWAAWDWRTP-------------------VGPAGQSHAL 831
Query: 323 P--IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM---WDKLFETPNFF 377
P I TP+ P + T V+ R ++ +E + + E T W +L P
Sbjct: 832 PLTITTPSAPIRPCTDQVTAGMRDLVTQELFRAWEVLEGAPTDPTARYPWAELLAPPPLH 891
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNL-ERNPHINLAHVNPECYTDTTGV 436
++ + V+ A + E G + + R LI +L E P H P +T T
Sbjct: 892 RRHAAWAVVTAGPGADE------GRLRGRTRSLITDLAETTPDC---HAWPRPFTTTPTR 942
Query: 437 IANGSGSPEITAE 449
A G G+ TA+
Sbjct: 943 YAIGLGAAPPTAD 955
>gi|124003256|ref|ZP_01688106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
gi|123991354|gb|EAY30785.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
Length = 982
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 23/298 (7%)
Query: 106 IYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPV 165
+ FGS L + +DID LC P + +F L V + L V +A V
Sbjct: 625 LQVFGSELLKIAQAHSDIDVLCPLPPSLALDPFFDQLQTALSQVAQGVHL--VTDARVTT 682
Query: 166 IKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPN 225
+K N G+ D+L + P + + D +++ G +IL L
Sbjct: 683 LKFNLQGVNFDLL--AVHHPSFPVPLHQVKPEAFQQFDPLSWQNMVGYLEGQKILALGNK 740
Query: 226 IEN--FRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVA---RICQLYPNAAASTLVCK 280
+ FR +RTI+LWA + + NV G+ G +SWA+L A CQ L+
Sbjct: 741 VGQTLFRDLVRTIRLWAARKQLTGNVFGFFGNISWAILAAWSCAHCQTKHTPTLEHLLQN 800
Query: 281 FFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSI 340
FF + +Q W P+ L++ + + V MP+++ YP +N+T N++
Sbjct: 801 FFDLLAQHSWVIPIGLQEGTSSYI----------VRKHRDWMPVVSAFYPYKNTTRNLTQ 850
Query: 341 STRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE 398
ST ++Q E ++ + + + N W F + +Y L+L S S E LE
Sbjct: 851 STAKVIQGEIQKARLL---LQNTSINWLTFFAATDVQKEYTQLLIL-ELSASNEQNLE 904
>gi|451855249|gb|EMD68541.1| hypothetical protein COCSADRAFT_178345 [Cochliobolus sativus
ND90Pr]
Length = 1226
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 145/337 (43%), Gaps = 27/337 (8%)
Query: 45 LQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGG 104
L + +++ L+ + + DE+ + R E L +V + ++ + P V
Sbjct: 609 LMDSSDMSSALEVHGMIPNDEQTTQRQEAFELLQRIVSDTSEDADTVQPGIPLV------ 662
Query: 105 KIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVD--EVTDLRAVEEAF 162
I GSY LGV +DID LC+ + +F ++L +V LR VE
Sbjct: 663 -IVPVGSYALGVWTSSSDIDCLCIG--SISSKTFFKLARQRLVKAGNPQVRILRKVEATT 719
Query: 163 VPVIKMNFDGIEIDMLF--ARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEIL 220
+++++ +GI +DM + A ++ + D+ + NL +R L R +
Sbjct: 720 GTMLELSVNGILMDMQYCPAAQVVERWSEFADIPASDPIFNLSMLSLRKLKPYRDLLYLQ 779
Query: 221 RLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST---- 276
R +P+ FR A R IKLW + G+Y+ GYLGG+ ++++ +C+ + S
Sbjct: 780 RTIPSRSLFRQAYRLIKLWGVQRGLYAAKFGYLGGMHITLMLSWVCKSLAHDVGSVNVAD 839
Query: 277 LVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTF 336
+V FF ++ + W ++ + F PR N + R P++ ++ NS F
Sbjct: 840 IVVSFFQHYANFDWSNDMVY------DAFFHKKKPRYNRSTR---EPMVILSFHAPNSNF 890
Query: 337 NVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFET 373
ST +Q K+ K + W K F T
Sbjct: 891 -AQKSTVPGLQMLIKEFKAADMKLSEPGMTWQKFFST 926
>gi|342879986|gb|EGU81216.1| hypothetical protein FOXB_08249 [Fusarium oxysporum Fo5176]
Length = 1207
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 183/436 (41%), Gaps = 59/436 (13%)
Query: 31 MTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSI 90
M +L PP L + L + L+ ++E + R+E + L ++K+ +S
Sbjct: 581 MKISLQQPPPG---LANSESLEDFLEGRGCLPNEQERTDRVEAIKTLEMVLKDATSSISE 637
Query: 91 --AKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK- 147
+++ P + VG SY LGV +DID LC+ P +F+ ++LK
Sbjct: 638 NDSRSGPAFIVVPVG-------SYGLGVWTSSSDIDCLCIGP--FSSKTFFALAVQRLKR 688
Query: 148 -TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA--LKEIPDDMDLRDDMLLKNLDQ 204
T V LR V+ ++++ +GI++D+ + A + P+ M L
Sbjct: 689 ATTLGVRILRRVKANSGNMLELEVNGIKVDLQYCAAASIAERWPEVMKRPASDPAFALSF 748
Query: 205 KCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVAR 264
+ + L R + R +P++ +R+A IK WA+ GIYS G+LGG+ ++L+
Sbjct: 749 QALAKLKPVRDLFYLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVP 808
Query: 265 ICQ--LYPNAAA--STLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYH 320
+C+ Y N + +V FF +S++ W + V+DP + RY+
Sbjct: 809 VCKAVAYENETVTPADIVVTFFHYYSEFDWKNSM-------------VFDPFFHKELRYN 855
Query: 321 L-----MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLF---- 371
+ +I P N+ SI T + EF + K + D +W KL
Sbjct: 856 RTFREPLCLIGWHAPALNTAPIASIPTVATISSEFGRAKRMLSD---DDCIWGKLLGIEP 912
Query: 372 -------ETP---NFFTKYRHYLVLIAS--SVSAEDQLEWCGLIESKVRHLIGNLERNPH 419
+ P F ++ Y+ + A S E + G +ES+ L+ ++ R
Sbjct: 913 ETALGSVQAPAATEFLHAFKTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDINRKLK 972
Query: 420 INLAHVNPECYTDTTG 435
LA + P + D +
Sbjct: 973 HLLARIWPSRFLDVSA 988
>gi|429849228|gb|ELA24631.1| duf455 domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 1201
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL-KTVDE-VTDLRAVEEAFVPVIK 167
GSY LGV K +DID LC+ + +F+ +L K+V E V LR V+ +++
Sbjct: 638 GSYGLGVWSKSSDIDCLCIG--SISPRVFFTLARHRLRKSVGEGVRILRQVKAKTGTMLE 695
Query: 168 MNFDGIEIDMLFARLA---------LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDE 218
+ G+ D+ + + A LK P D +L + + L R
Sbjct: 696 IEVLGLRCDLQYCQAASVANQWPNLLKRPPSDAAF-------SLPTQTLLKLKPARDMYY 748
Query: 219 ILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST-- 276
I R VP++ FR+ + IK WAK +GIY+ GYLGGV ++++ R+C++ + +
Sbjct: 749 IARSVPDLAQFRVCYQVIKTWAKANGIYAAKFGYLGGVHLSVMLVRVCKMLLHGMGTVST 808
Query: 277 --LVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMP-----IITPAY 329
++ FF ++ + W + V+DP + RYH P ++
Sbjct: 809 ADVIATFFDHYAHFDWKNDI-------------VFDPFFHKQLRYHRTPREAMCLLGWHS 855
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
P N+ S+ T I+ E +Q G T W + P +
Sbjct: 856 PTLNTALIASVPTVKIISTELRQANA---KFTEGAT-WQSILSAPGMIAE 901
>gi|396483666|ref|XP_003841760.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
gi|312218335|emb|CBX98281.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
Length = 1224
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 155/373 (41%), Gaps = 44/373 (11%)
Query: 63 TDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGAD 122
T++++ R + L N+V I + A + V + GSY LGV +D
Sbjct: 619 TEKQMEVRQQAFELLKNVVLGTIDKQDHASS-------GVSLNMVAVGSYALGVWTADSD 671
Query: 123 IDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVEEAFVPVIKMNFDGIEIDMLF- 179
+D LCV V +F ++L + LR VE +++++ DGI D+ +
Sbjct: 672 LDCLCVGS--VSSKTFFKLVRQRLARARNRGIKILRKVEAKTGTMLELSVDGISADLHYC 729
Query: 180 --ARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIK 237
AR+A + + L + NL +R L R I R +P++ FR A R IK
Sbjct: 730 PAARIA-ERWSEFHGLSASDPIFNLPALSLRKLKSYRDFLYIQRTLPSLSAFRTAFRCIK 788
Query: 238 LWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST----LVCKFFLVFSQWKWPQP 293
LWA + GIYS+ GYL G +++ IC+ + S +V FF ++ + W
Sbjct: 789 LWAVQRGIYSSKFGYLSGTHITLMLTWICKKLRYQSGSVGPPDMVVSFFSYYANFDWTNE 848
Query: 294 VLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY--PQQNSTFNVSISTRTIMQEEFK 351
+L + F PR + + R P++ Y P N + I+ EF+
Sbjct: 849 LLF------DAFFHESRPRYHRSAR---EPMVILGYHAPHSNIAHTSTTPGLQILMNEFR 899
Query: 352 QGKTISEDIYNGKTMWDKLFETP---------NFFTKYRHYLVLIASSVSAEDQLEWCGL 402
+ + + W K F P + H+L S V+ E +++ G
Sbjct: 900 AAADV---LSSPGITWAKFFGDPSSLKDSVQLHLSQMTEHFLATQHSFVTVE--MQYWGR 954
Query: 403 IESKVRHLIGNLE 415
+K + L+G +E
Sbjct: 955 TLAKGKGLVGWIE 967
>gi|315043460|ref|XP_003171106.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311344895|gb|EFR04098.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1217
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 132/284 (46%), Gaps = 32/284 (11%)
Query: 22 QSQAPVTYGMTTALNL-SPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
+++A T TAL L S P+ L E+ CL+ ++ + E+L SR V + L +
Sbjct: 574 ENKASETVSQETALQLTSLPDAL--SSLDEIVACLENSSLLPSSEDLKSRKAVAATLAQI 631
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFS 140
+ E I++ S P V + GSY LG +D+D LC+ + +FS
Sbjct: 632 LTEPIRDSSGRDIKTPLV-------LIPVGSYGLGTWSPDSDVDCLCIGA--ISSTTFFS 682
Query: 141 SFFEKLKTVDE--VTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA--------LKEIPDD 190
++L+ + +R V+ A ++++ I++D+ + A + IP +
Sbjct: 683 LAIQRLRKASALGIRIMRKVKAATGMMLELQSGNIKLDLQYCPAANIAERWQEVSRIPSN 742
Query: 191 MDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVL 250
D D+ L +L + L R + I R+VP++ FRLA R I WAK G+Y++
Sbjct: 743 -DPIFDLSLHSLSK-----LQPYRDQEYIKRMVPDMNVFRLAHRCITQWAKSSGVYTSKF 796
Query: 251 GYLGGVSWAMLVARICQLYPNAAAST----LVCKFFLVFSQWKW 290
G LGG+ M+++R+ QL LV FF ++ + W
Sbjct: 797 GLLGGIHITMMLSRLHQLLHGKVGRVTIPELVAMFFHHYAHFDW 840
>gi|456389475|gb|EMF54915.1| hypothetical protein SBD_4583 [Streptomyces bottropensis ATCC
25435]
Length = 930
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 143/348 (41%), Gaps = 46/348 (13%)
Query: 87 EVSIAKNIPPTVAEKV-GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
EV +A I VA+ GG ++ GS R+G GAD+D + P + +S +
Sbjct: 572 EVGVADRITRLVADAFPGGVVHVVGSRRMGCALPGADLDLVAALPGTAE----LTSVQRE 627
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
L+ E D+R V A VP +++ DG+ +D+ + + + R + L +
Sbjct: 628 LR---EAVDVREVVGARVPGLRLRLDGVNVDLAVVATGSLDPVEAVARRTE-----LGEA 679
Query: 206 CVRSLNGCRVTDEILRLVPNIE-NFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVAR 264
+L+ + +L V E F R +K WA+ G+ S G L G++W++L AR
Sbjct: 680 AAVALSAVSDAEAVLASVGGHEPAFAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAAR 739
Query: 265 ICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPI 324
+ L+ FF ++ W W +PV P + P + I
Sbjct: 740 TVSEAGDLPPDGLLRHFFATWAAWDWREPV--GGPGGTSGRLP--------------LTI 783
Query: 325 ITPAYPQQNSTFNVSISTR-TIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHY 383
+TP+ P + T V+ R I QE F+ + + E + W L P ++ +
Sbjct: 784 VTPSAPVRPCTDQVTTGMRDLITQELFRAWELLEE-----GSSWADLLTPPPLHRRHAAW 838
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYT 431
++ A E G + ++R L+ +LA V P C+
Sbjct: 839 AIVTVGGGPAGVADE--GRVRGRMRALV--------TDLAEVAPGCHA 876
>gi|336268012|ref|XP_003348771.1| hypothetical protein SMAC_01794 [Sordaria macrospora k-hell]
gi|380094029|emb|CCC08246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1302
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 177/445 (39%), Gaps = 79/445 (17%)
Query: 27 VTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN-------- 78
V + T++ L P L L E + N+ + EE+S R L
Sbjct: 630 VLLALKTSIKLITPPAGPLSEPGSLTEAMAELNIFPSHEEISKRKAAFHALKIILLDNPP 689
Query: 79 -NLVKEWIKEVSIAK------NIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAP- 130
N + + + + A N PP + I GS+ LGVH +DID L + P
Sbjct: 690 PNQYPQAVTDTTTASETQARSNQPPLI-------ITPVGSFALGVHTSSSDIDVLAIGPF 742
Query: 131 -------------RHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDM 177
R + FSS+ K+ LR + + +++++ + I+ D+
Sbjct: 743 STNTFFSLAIQRLRRASSSPLFSSYQPKI--------LRRIYSSTGTMLELSVNQIKFDL 794
Query: 178 LFA----------RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIE 227
+ R+ P + + +L + L R D + R VP++
Sbjct: 795 QYCPAAHIASNWPRILSTAPPGNA-------VWSLPALTLTKLKAARDLDYLRRTVPDLA 847
Query: 228 NFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI------CQLYPNAAASTLVCKF 281
FR A R ++ WAK G+Y+ GYLGG+ ++++AR+ Q LV F
Sbjct: 848 VFRTAHRAVRSWAKARGVYAQRFGYLGGIQISVMLARVYKALALTQGVTRVGVEELVASF 907
Query: 282 FLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYH-----LMPIITPAYPQQNSTF 336
F ++++ W + ++ D V F + + Y M ++ P N++
Sbjct: 908 FEEYARFHWGRDMVY---DEVCPWFRQKREKGGEKEVYRRTSREAMVVLGWFGPGLNTSG 964
Query: 337 NVSISTRTIMQEEFKQGK--TISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIAS--SVS 392
S+ + ++EEF++ + + E++ + K + F T Y+ Y+ + +S
Sbjct: 965 QASVWSVRTLKEEFERARDQLVKEEVRSWKEFLEGSSAAEEFLTGYKSYVKVDVQYWGLS 1024
Query: 393 AEDQLEWCGLIESKVRHLIGNLERN 417
++ G +ES++ L+ +L R
Sbjct: 1025 PSRGAQFVGWLESRLVMLLVDLHRR 1049
>gi|189194681|ref|XP_001933679.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979243|gb|EDU45869.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1151
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 147/337 (43%), Gaps = 30/337 (8%)
Query: 45 LQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI--KEVSIAKNIPPTVAEKV 102
L + + L + + TDE+ + ++ + E SI IP +
Sbjct: 529 LSESSSITSALAAHGMFPTDEQTRQHQDAFETFRQILLGTLDATEDSIQPEIPFVMVP-- 586
Query: 103 GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVEE 160
GSY LGV +DID LC+ + +F +++ D V LR VE
Sbjct: 587 ------VGSYALGVWTSDSDIDCLCIGT--ISSKTFFKLARQRIIKSDNRGVRILRKVEA 638
Query: 161 AFVPVIKMNFDGIEIDMLF--ARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDE 218
+ +++++ +G+ +D+ + A ++ + ++ + NL +R L R
Sbjct: 639 STGTMLELSVNGVLMDLQYCPATQVVERWSEFRNIPASDPIFNLSLLSLRKLKPYRDLLY 698
Query: 219 ILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYP----NAAA 274
I R +P++ +FRLA R IKLWA + G+YS G+LGGV ++++ IC+ +A+A
Sbjct: 699 IQRTLPSLSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWICKRLAYDSGSASA 758
Query: 275 STLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNS 334
+ LV FF + Q+ W ++ ++ F PR N + R P++ + NS
Sbjct: 759 ADLVTSFFHHYGQFDWTNEMVY------DVFFHKKRPRYNRSAR---EPMVVLGFHAPNS 809
Query: 335 TFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLF 371
ST +Q K+ K E + WD F
Sbjct: 810 NI-AHTSTVPGLQTLVKEFKAAGERLCEQGMTWDAFF 845
>gi|46110072|ref|XP_382094.1| hypothetical protein FG01918.1 [Gibberella zeae PH-1]
Length = 1200
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 174/414 (42%), Gaps = 42/414 (10%)
Query: 51 LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSI--AKNIPPTVAEKVGGKIYT 108
L L+ Y T++E +R + + L +K+ S ++ PP V VG
Sbjct: 592 LENFLENYGCLPTEQERENRAQAVRALEVALKDVDLPASEDDTRSGPPFVVVPVG----- 646
Query: 109 FGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKM 168
SY LGV +DID LC+ P +F+ ++LK ++ +R V+ ++++
Sbjct: 647 --SYGLGVWTSSSDIDCLCIGP--FSSKTFFALAVQRLKRAADIRIIRRVKANSGYMLEL 702
Query: 169 NFDGIEIDMLFARLA--LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNI 226
GI++D+ + A + P+ M + L + + L R + R +P++
Sbjct: 703 EVHGIKVDLQYCAAASIAERWPEVMKRPANDSAFALPFQTLAKLKPVRDLFYLRRSLPDM 762
Query: 227 ENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST----LVCKFF 282
+R+A IK WA+ GIYS G+LGG+ ++L+ IC+ + + + +V FF
Sbjct: 763 VQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPICKALASGSETVSPTDIVVTFF 822
Query: 283 LVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSIST 342
+S + W ++ F D R N R L I A + + +
Sbjct: 823 RHYSNFDWKTSMVFDP-------FFHKDLRYNRTFREPLCLIGWHAPALNTAPIASNPTV 875
Query: 343 RTIMQEEFKQGKTISEDIYNGKTMWDKLF------------ETPNFFTKYRHYLVLIAS- 389
TI E + + +SE NG T W+ + F +++ Y+ + A
Sbjct: 876 MTIAAEIERANRLLSE---NGCT-WNSVLGLQSAQEAGKSRGATEFLKEFKTYIKIDAHY 931
Query: 390 -SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSG 442
S E + G +ES+ L+ ++ R +A + P + DT+ A G G
Sbjct: 932 WGPSQEKSGRFIGWLESRCVMLLVDVNRKLQHLVARIWPSRFLDTSSGGAGGPG 985
>gi|349804279|gb|AEQ17612.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 153
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 48/53 (90%)
Query: 141 SFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDL 193
SF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP+D+DL
Sbjct: 1 SFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDL 53
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 70/121 (57%), Gaps = 27/121 (22%)
Query: 383 YLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSG 442
Y++L+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 54 YIILLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP----------- 102
Query: 443 SPEITAEGKEEGGENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQ 498
+P GENT +MW IGL F + N+ ++LTYDIQ FT+ V+ Q
Sbjct: 103 AP----------GENTEK--EEFRTMWVIGLVFKKMENSENLSVDLTYDIQSFTDTVYRQ 150
Query: 499 A 499
A
Sbjct: 151 A 151
>gi|408391246|gb|EKJ70626.1| hypothetical protein FPSE_09136 [Fusarium pseudograminearum CS3096]
Length = 1200
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 174/416 (41%), Gaps = 45/416 (10%)
Query: 51 LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSI--AKNIPPTVAEKVGGKIYT 108
L L+ Y T++E ++R + + L +K+ S A++ PP V VG
Sbjct: 592 LEHFLENYGCLPTEQERANRAQAVRALEVALKDVDLSASEDDARSGPPFVVVPVG----- 646
Query: 109 FGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKM 168
SY LGV +DID LC+ P +F+ ++LK ++ +R V+ ++++
Sbjct: 647 --SYGLGVWTSSSDIDCLCIGP--FSSKTFFALAVQRLKRAADIRIIRRVKANSGYMLEL 702
Query: 169 NFDGIEIDMLFARLA--LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNI 226
GI++D+ + A + P+ M + L + + L R + R +P++
Sbjct: 703 EVHGIKVDLQYCAAASIAERWPEVMKRPANDSAFALPFQTLAKLKPVRDLFYLRRSLPDM 762
Query: 227 ENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAA----STLVCKFF 282
+R+A IK WA+ GIYS G+LGG+ ++L+ IC+ + + + +V FF
Sbjct: 763 VQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPICKALASGSEIVSPTDIVVTFF 822
Query: 283 LVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSIST 342
+S + W ++ F D R N R L I A + + +
Sbjct: 823 RHYSNFDWKTSMVFDP-------FFHKDLRYNRTFREPLCLIGWHAPALNTAPIASNPTV 875
Query: 343 RTIMQEEFKQGKTISEDIYNGKTMWDKLF------------ETPNFFTKYRHYLVLIAS- 389
I E + + +SED W+ + F +++ Y+ + A
Sbjct: 876 MAIAAEIERANRLLSED----GCTWNSVLGLQSAQEAGKSRGATEFLKEFKTYVKIDAHY 931
Query: 390 -SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSP 444
S E + G +ES+ L+ ++ R +A + P + D V + G+G P
Sbjct: 932 WGPSQEKSGRFIGWLESRCVMLLVDVNRKLQHLVARIWPSRFID---VFSGGAGGP 984
>gi|340959918|gb|EGS21099.1| hypothetical protein CTHT_0029400 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1213
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 166/401 (41%), Gaps = 64/401 (15%)
Query: 53 ECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAE-KVGGKIYTFGS 111
+ L V + EE ++R + + L N + + IA +P ++ + I GS
Sbjct: 615 KALIQLGVIPSQEEEATRKQAVDLLRNTITD-----VIASTVPSGLSRFQAPIVIVPVGS 669
Query: 112 YRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV--DEVTDLRAVEEAFVPVIKMN 169
Y LGV +D+D LC+ P +F+ L+ V ++ +R V ++++
Sbjct: 670 YGLGVWTSSSDLDVLCIGP--FSAQTFFALVTRALRKVPPQDIKIIRRVRANTGTMLELE 727
Query: 170 FDGIEIDM-------LFARLA--LKEIPDD--MDLRDDMLLKNLDQKCVRSLNGCRVTDE 218
GI+ D+ + R L+ P+D DL LLK L R D
Sbjct: 728 IHGIKTDLQCCPATTIAERWGDVLRTAPNDPVWDLSPQSLLK---------LKAVRDMDY 778
Query: 219 ILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPN------- 271
+ R VPNI FR A R I+ WAK G+Y++ G+L G+ A+LVAR+ +L N
Sbjct: 779 LRRTVPNIRVFRAANRAIRAWAKARGVYTSRFGFLSGIQIAILVARVAKLLANNPDVKTP 838
Query: 272 AAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY-- 329
+ FF ++ + W + +L F + R + Y+ +P P
Sbjct: 839 ITVEDFLVTFFTHYASFPW----------STHLAFDPFFHRNRLP--YNRVPFREPIAIL 886
Query: 330 ----PQQNSTFNVSISTRTIMQEEFKQ-------GKTISEDIYNGKTMWDKLFETPNFFT 378
P N+ S S+ + +EF++ G + T + F +
Sbjct: 887 GYFPPALNTAAAASPSSARTLADEFRRAGEALVSGNVTDWAFFLSGTGSNGTTGVQEFLS 946
Query: 379 KYRHYLVLIAS--SVSAEDQLEWCGLIESKVRHLIGNLERN 417
Y+ Y+ L AS +S ++ G +ES++ L+ ++ R
Sbjct: 947 AYKTYIRLDASYWGLSRSRGSQFLGWLESRLVSLLVDISRR 987
>gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
Length = 1230
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 36/327 (11%)
Query: 58 YNVSETDEELSSRMEVLSKLNNLVKEWI--KEVSIAKNIPPTVAEKVGGKIYTFGSYRLG 115
+N+ TDE+ + L ++ + EVSI IP I GSY LG
Sbjct: 621 HNMFPTDEQTRQHQDAFETLRQILLGTLDDTEVSIQPEIPFV--------IVPVGSYALG 672
Query: 116 VHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVEEAFVPVIKMNFDGI 173
V +DID LC+ + +F +++ D V LR VE + +++++ +G+
Sbjct: 673 VWTSDSDIDCLCIGT--ISSKTFFKLARQRIIRSDNRGVRVLRKVEASTGTMLELSVNGV 730
Query: 174 EIDMLFARLALKEIPDDMDLR-----DDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIEN 228
+D+ + A++ + + R D M NL +R L R I R +P+ +
Sbjct: 731 LMDLQYCP-AIQVVERWSEFRNIPASDPMF--NLSLLSLRKLKPYRDLLYIQRTLPSPSS 787
Query: 229 FRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYP----NAAASTLVCKFFLV 284
FRLA R IKLWA + G+YS G+LGGV ++++ +C+ +A+A+ LV FF
Sbjct: 788 FRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWVCKRLAYDSGSASAADLVASFFHH 847
Query: 285 FSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRT 344
+ Q+ W ++ ++ F PR N + R P++ + NS ST
Sbjct: 848 YGQFDWTNDMVY------DVFFHKKRPRYNRSTR---EPMVVLGFHTPNSNI-AHTSTMP 897
Query: 345 IMQEEFKQGKTISEDIYNGKTMWDKLF 371
+Q K+ K + + WD F
Sbjct: 898 GLQILVKEFKAADKRLCEPGMTWDAFF 924
>gi|290958156|ref|YP_003489338.1| hypothetical protein SCAB_36991 [Streptomyces scabiei 87.22]
gi|260647682|emb|CBG70787.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 925
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 143/357 (40%), Gaps = 63/357 (17%)
Query: 86 KEVSIAKNIPPTVAEKV-GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFE 144
+E A + VA+ + GG ++ GS R+G GAD+D + P V+ S
Sbjct: 567 REAGTADRVRRLVADALPGGVVHVAGSRRMGCALPGADLDLVAALPGTVE----LGSLRR 622
Query: 145 KLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNL-- 202
+L EV R V A VP +++ FDG+++D+ + + +D R ++
Sbjct: 623 ELGGASEV---REVVGARVPGLRLRFDGLDVDLAVVATGAMDPGEAVDRRAELGEAAALA 679
Query: 203 -----DQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
D + V + G R F R +K WA+ G+ S G L G++
Sbjct: 680 LSAVSDAEAVLASVGGRGP-----------AFAGLARQVKAWARARGLDSAPFGGLPGLA 728
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPV--LLKKPDNVNLGFPVWDPRVNV 315
W++L AR + S L+ FF ++ W W +PV L P
Sbjct: 729 WSVLAARTAGEAGDLPPSCLLRHFFATWAAWDWREPVGGLEGAPAGP------------- 775
Query: 316 ADRYHLMPIITPAYPQQNSTFNVSISTR-TIMQEEFKQGKTISEDIYNGKTMWDKLFETP 374
+ + TP+ P ++ T V+ R I QE F+ + + E W ++ P
Sbjct: 776 ------LTVATPSAPVRSCTDQVTADMRDLITQELFRAWELLEE-----GASWTEVLAPP 824
Query: 375 NFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYT 431
++ + V+ A + D + G + ++R LI +LA + P C+
Sbjct: 825 PLHRRHAAWAVVTAG--AGTDGVVDEGRVRGRMRALI--------TDLAGLAPGCHA 871
>gi|83774635|dbj|BAE64758.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 457
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 42/212 (19%)
Query: 221 RLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAA----AST 276
R +P++ +FRLA R IK+WA++ GIYS+ LGYLGG+ +L+ARIC L A A+
Sbjct: 6 RTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAAD 65
Query: 277 LVCKFFLVFSQWKWPQ-----PVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQ 331
++ FF ++Q+ W + P K P PR R L+ I++ P+
Sbjct: 66 IITTFFKHYAQFNWEKQVVYDPSFYKSP-----------PRYFRPQREPLV-ILSQHQPK 113
Query: 332 QNSTFNVSI-STRTIMQEEFKQGKTISEDIYNGKTMWDKLFET-------PNFFTKYRHY 383
N SI STRT++QE + K +S+ W++L + F YR Y
Sbjct: 114 VNVARAASIPSTRTLVQEFQRADKLLSQQ----DVTWEQLAGSIENSTGADEFLKSYRSY 169
Query: 384 LVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
A+ +++ G +K R L+G LE
Sbjct: 170 ---------AKVNVQYWGGAATKGRMLVGWLE 192
>gi|10434763|dbj|BAB14368.1| unnamed protein product [Homo sapiens]
Length = 302
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 468 MWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSE 523
MWF+G+ F A +V ++LTYDIQ FT+ V+ QA M+K+GMKIE HVKKKQL
Sbjct: 1 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHH 60
Query: 524 YLPAHMLKKDKKTKSGDQNTSA 545
YLPA +L+K KK D N S+
Sbjct: 61 YLPAEILQKKKKQSLSDVNRSS 82
>gi|296820870|ref|XP_002850004.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
gi|238837558|gb|EEQ27220.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
Length = 1204
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 17/259 (6%)
Query: 45 LQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGG 104
L + E+ CL ++ +E + +R V++ L ++ E I + + P V
Sbjct: 595 LSTSDEIKSCLGASSMLPDEEGIKTRKSVVATLAQILTEPIHDSNGRDIETPLV------ 648
Query: 105 KIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK--TVDEVTDLRAVEEAF 162
+ GSY LG +DID LC+ P + + +FS ++LK + + +R V+ A
Sbjct: 649 -LIPVGSYGLGTWGPNSDIDCLCIGP--ISTSTFFSLAIQRLKKASAHGIRIMRKVKAAT 705
Query: 163 VPVIKMNFDGIEIDMLFARLA--LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEIL 220
++++ I++D+ + A K + + + +L + L R + I
Sbjct: 706 GMMLELQAGNIKLDLQYCPAANIAKRWQEATKIPPHDPIFDLSIYSLSKLQPFRDQEYIK 765
Query: 221 RLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY----PNAAAST 276
R+VP++ F+LA R I LWAK G+YS+ G LGG+ M+++R+ QL
Sbjct: 766 RMVPDMYVFQLAHRCITLWAKTSGVYSSKFGLLGGIHITMMLSRLHQLLHEDIGRVTVPE 825
Query: 277 LVCKFFLVFSQWKWPQPVL 295
L+ FF ++ + W V+
Sbjct: 826 LLTMFFHHYANFDWKNKVV 844
>gi|10436578|dbj|BAB14858.1| unnamed protein product [Homo sapiens]
Length = 302
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 468 MWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSE 523
MWF+G+ F A +V ++LTYDIQ FT+ V+ QA M+K+GM+IE HVKKKQL
Sbjct: 1 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMRIEATHVKKKQLHH 60
Query: 524 YLPAHMLKKDKKTKSGDQNTSA 545
YLPA +L+K KK D N S+
Sbjct: 61 YLPAEILQKKKKQSLSDVNRSS 82
>gi|226295206|gb|EEH50626.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1228
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 148/337 (43%), Gaps = 42/337 (12%)
Query: 44 DLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVG 103
D +L CL ++ + E+ R L +L+ + ++P +
Sbjct: 622 DFHDPADLKLCLADRSIFPSPEDAEKRKAAFKYLKHLI--------LHGSLPESGETHET 673
Query: 104 GK------IYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDL 155
G+ + GSY LGV +D+D LCV P V +F ++L+ + V L
Sbjct: 674 GRSNFSFIVTAVGSYGLGVWTNSSDVDCLCVGP--VSSTTFFELAMQRLRKGADSGVKIL 731
Query: 156 RAVEEAFVPVIKMNFDGIEIDMLFAR--------LALKEIPDDMDLRDDMLLKNLDQKCV 207
R V+ A + ++ +G++ D+ + L + +P R D L +L +
Sbjct: 732 RKVKAATGTMWELEVNGVKFDLQYCPAGAVAERWLEVSHLP-----RADPLF-DLAYLSL 785
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
L R + R + N FRL R IK WAK GIYS+ GYLGG+ ++++R+ +
Sbjct: 786 VKLQPYRDQTYLQRTIKNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLK 845
Query: 268 LYP--NAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
L P + + ++ FF ++ + W + ++ ++ F PR N + R M I+
Sbjct: 846 LLPPNTTSVADILRTFFNHYADFYWMEGMV------YDMNFHRKQPRYNRSPR-ECMVIL 898
Query: 326 TPAYPQQNSTFNVSIST-RTIMQEEFKQGKTISEDIY 361
T YP N SIS+ RTI+ E + ISE Y
Sbjct: 899 TLHYPIMNVARTASISSMRTIVDEMNRADTLISEGRY 935
>gi|240274573|gb|EER38089.1| DUF455 domain-containing protein [Ajellomyces capsulatus H143]
Length = 1256
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 168/387 (43%), Gaps = 59/387 (15%)
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGK-----IYTFGSYRLGVHHKGADIDALCVAPRHVD 134
L+K I++ S+++ P+ E++G + T GS LGV + +DID LCV +
Sbjct: 655 LLKHIIQDGSLSE---PSNGEEIGRSKFSIVVTTVGSSGLGVWTESSDIDCLCVG--SIS 709
Query: 135 RADYFSSFFEKLKT-VD-EVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALK-----EI 187
+F ++L+ +D V +R V+ AF ++++ +GI+ D+ + A E+
Sbjct: 710 ANVFFELIIQRLRNRIDLGVKIIRRVKPAFGTMLELEVNGIKFDLQYCPAAAVAERWLEV 769
Query: 188 PDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYS 247
P+ L L NL L R + R + N FRL R IK WAK GIYS
Sbjct: 770 PN---LPQSSPLFNLSLIPRMKLQPYRDQAYLQRTIQNPATFRLLHRIIKGWAKYRGIYS 826
Query: 248 NVLGYLGGVSWAMLVARICQLYP--NAAASTLVCKFFLVFSQWKWPQ-----PVLLKKPD 300
+ GYLGG+ ++++R+ +L P +A+ ++C FF + + W + P+ +KP
Sbjct: 827 SRFGYLGGIHITLMLSRLLKLLPPNPGSAADILCTFFNHYGNFNWEKDAVYDPIFHEKP- 885
Query: 301 NVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDI 360
PR N M I T P N + SI + + +E K+ + + I
Sbjct: 886 ----------PR-NYRPPREGMIIFTLHTPIINVARSTSIPSMRKIVDEMKRAENL---I 931
Query: 361 YNGKTMWDKLF-------------ETPNFFTKYRHYLVLIAS--SVSAEDQLEWCGLIES 405
G W +L F Y Y+ + S+S G +ES
Sbjct: 932 SEGNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIKINVQYWSLSLAKGSSLVGWVES 991
Query: 406 KVRHLIGNLERN-PHINLAHVNPECYT 431
+ L+ +L R P I A + P +T
Sbjct: 992 RCLDLLDDLYREFPDIQ-ARIWPARFT 1017
>gi|295664162|ref|XP_002792633.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278747|gb|EEH34313.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1260
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 148/336 (44%), Gaps = 54/336 (16%)
Query: 106 IYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVEEAFV 163
+ GSY LGV +D+D LCV P V +F ++L+ + V LR V+ A
Sbjct: 682 VTAVGSYGLGVWTNSSDVDCLCVGP--VSSRTFFELAMQRLRKGADSGVKILRKVKAATG 739
Query: 164 PVIKMNFDGIEIDMLFAR--------LALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRV 215
+ ++ G++ D+ + L + +P R D L +L + L R
Sbjct: 740 TMWELEVRGVKFDLQYCPAGAVAERWLEVSHLP-----RADPLF-DLAYLSLVKLQPHRD 793
Query: 216 TDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYP--NAA 273
+ R + N FRL R IK WAK GIYS+ GYLGG+ ++++R+ +L P A+
Sbjct: 794 QTYLQRTIQNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTAS 853
Query: 274 ASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQN 333
+ ++ FF ++ + W + ++ ++ F PR N + R M I+T YP N
Sbjct: 854 VADILRTFFNHYADFYWMEGMV------YDMIFHRKQPRYNRSPR-EGMVILTLHYPIMN 906
Query: 334 STFNVSIST-RTIMQEEFKQGKTISEDIYNGKTMWDKLFE-TPN------------FFTK 379
SIS+ RTI+ E + ISE G+ W L TP F
Sbjct: 907 VARTASISSMRTIVDEMDRADTLISE----GRLRWTSLVGITPQAGQPTLSNSADEFLKS 962
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
Y Y+ + +++ GL +K LIG LE
Sbjct: 963 YNSYIKI---------NVQYWGLSLAKGSSLIGWLE 989
>gi|325090905|gb|EGC44215.1| DUF455 domain-containing protein [Ajellomyces capsulatus H88]
Length = 1256
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 168/387 (43%), Gaps = 59/387 (15%)
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGK-----IYTFGSYRLGVHHKGADIDALCVAPRHVD 134
L+K I++ S+++ P+ E++G + T GS LGV + +DID LCV +
Sbjct: 655 LLKHIIQDGSLSE---PSNGEEIGRSKFSIVVTTVGSSGLGVWTESSDIDCLCVG--SIS 709
Query: 135 RADYFSSFFEKLKT-VD-EVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALK-----EI 187
+F ++L+ +D V +R V+ AF ++++ +GI+ D+ + A E+
Sbjct: 710 ANVFFELIIQRLRNRIDLGVKIIRRVKPAFGTMLELEVNGIKFDLQYCPAAAVAERWLEV 769
Query: 188 PDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYS 247
P+ L L NL L R + R + N FRL R IK WAK GIYS
Sbjct: 770 PN---LPQSSPLFNLSLIPRMKLQPYRDQAYLQRTIQNPATFRLLHRIIKGWAKYRGIYS 826
Query: 248 NVLGYLGGVSWAMLVARICQLYP--NAAASTLVCKFFLVFSQWKWPQ-----PVLLKKPD 300
+ GYLGG+ ++++R+ +L P +A+ ++C FF + + W + P+ +KP
Sbjct: 827 SRFGYLGGIHITLMLSRLLKLLPPNPGSAADILCTFFNHYGNFNWEKDAVYDPIFHEKP- 885
Query: 301 NVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDI 360
PR N M I T P N + SI + + +E K+ + + I
Sbjct: 886 ----------PR-NYRPPREGMIIFTLHTPIINVARSTSIPSMRKIVDEMKRAENL---I 931
Query: 361 YNGKTMWDKLF-------------ETPNFFTKYRHYLVLIAS--SVSAEDQLEWCGLIES 405
G W +L F Y Y+ + S+S G +ES
Sbjct: 932 SEGNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIKINVQYWSLSLAKGSSLVGWVES 991
Query: 406 KVRHLIGNLERN-PHINLAHVNPECYT 431
+ L+ +L R P I A + P +T
Sbjct: 992 RCLDLLDDLYREFPDIQ-ARIWPARFT 1017
>gi|327293125|ref|XP_003231259.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
gi|326466375|gb|EGD91828.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
Length = 1216
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 167/402 (41%), Gaps = 69/402 (17%)
Query: 50 ELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTF 109
E+ L+ ++ +E+ SR V++ L+ ++ E I + S P V +
Sbjct: 600 EIVSSLEDSSILPGEEDFKSRKTVVATLSQILTEPIHDSSGRDIKTPLV-------LIPV 652
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVEEAFVPVIK 167
GSY LG +D+D LC+ + +F+ ++L+ + +R V+ A +++
Sbjct: 653 GSYGLGTWGPRSDVDCLCIGA--ISSTTFFALAIQRLRRASALGIRIVRKVKAATGIMLE 710
Query: 168 MNFDGIEIDMLFARLA--------LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEI 219
+ I++D+ + A + IP + D L + L R + I
Sbjct: 711 LQSGHIKLDLQYCPAANIAERWQEVSRIPSHDPIFD------LSLHSLSKLQPYRDQEYI 764
Query: 220 LRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL----YPNAAAS 275
R+VP++ FRLA R I WAK G+YS+ G LGG+ M++ R+ QL +
Sbjct: 765 KRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLCRLHQLIHEKFGRVTVP 824
Query: 276 TLVCKFFLVFSQWKWPQPVL------------LKKPDNVNLGFPVWDPRVNVADRYHLMP 323
LV FF ++ + W ++ L++P + V P +NVA
Sbjct: 825 ELVAMFFHHYAHFDWKNNMVVSPGVQTRYRRSLREPMVI---LTVHAPTINVA-----RA 876
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDI---YNGKTMWDKLFETPNFFTKY 380
+ TP+ S F +M E+ + I DI +N +T +K F Y
Sbjct: 877 VTTPSLRTIVSAFK---RAEELMGEDGAKWSNILNDISISHNNQTGAEK------FLAAY 927
Query: 381 RHYLVLIA-----SSVSAEDQLEWCGLIESKVRHLIGNLERN 417
+ Y+ + S A + W +ES+ L+ +L+R
Sbjct: 928 KSYIKVNVQYWGPSPTQASSLIGW---LESRFFRLLNDLDRQ 966
>gi|367045862|ref|XP_003653311.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
gi|347000573|gb|AEO66975.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
Length = 1221
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 29/299 (9%)
Query: 19 GKPQSQAPVT--YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELS---SRMEV 73
G + + P + +G+ LN+ P + + E+A + P ++ + E L+ S E
Sbjct: 542 GGAEMETPASDHWGIRCTLNVVAPGAKADEPSEEIASLVVPVHLHKAPEHLARPGSVKEA 601
Query: 74 LSKLNNL-VKEWIKEVSIAKNIPPTV-----AEKVGGKIYTF--------GSYRLGVHHK 119
L +L + E + A ++ +V A K G + GSY L V
Sbjct: 602 LVELGAIPSAEETAQREAALDLLKSVLLDTPAAKSAGTKSSLSPVVVVPVGSYALDVWTS 661
Query: 120 GADIDALCVAPRHVDRADYFSSFFEKLKTV--DEVTDLRAVEEAFVPVIKMNFDGIEIDM 177
+DID LC+ P ++F+ ++L+ + LR V ++++ DGI++D+
Sbjct: 662 SSDIDVLCIGP--FSTHNFFALASQRLRKAAGQGIRILRRVRANTGTMLEIEVDGIKMDL 719
Query: 178 LF--ARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRT 235
+ A + P + + +L + + L R D I R VP++ FRLA R
Sbjct: 720 QYCPATSVAERWPHVLQTPASDPVWSLSAQTLSKLKAVRDVDYIRRSVPDLAAFRLAHRF 779
Query: 236 IKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST----LVCKFFLVFSQWKW 290
IK WAK GIYS G+L G+ ++L+AR+ +L + L+ FF ++ + W
Sbjct: 780 IKTWAKSRGIYSARFGFLSGIQISILLARVQKLLARESGPCSVEDLLATFFTHYAAFDW 838
>gi|56567011|gb|AAV98538.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 169
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 70/128 (54%), Gaps = 27/128 (21%)
Query: 412 GNLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFI 471
G+LE+N I LAHVNP+ + +P+ + +E +MW I
Sbjct: 1 GSLEKNEFITLAHVNPQSFP-----------APKENPDKEE------------FRTMWVI 37
Query: 472 GLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPA 527
GL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI HVK+KQL + LP
Sbjct: 38 GLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPN 97
Query: 528 HMLKKDKK 535
H+L+K KK
Sbjct: 98 HVLQKKKK 105
>gi|358342231|dbj|GAA49742.1| poly(A) polymerase [Clonorchis sinensis]
Length = 373
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 40/197 (20%)
Query: 353 GKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIG 412
G T+S D K W LFE P FF +YRHY+V+I + + LE CGL+ES++R L+
Sbjct: 32 GLTVSSDALLHKQPWSNLFE-PAFFFRYRHYVVVIVTGSAKRSFLELCGLVESRLRVLVS 90
Query: 413 NLERNPHINLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIG 472
N E N ++ +AHVN Y G G + AE + WFIG
Sbjct: 91 NFELNRYVKIAHVNCRSY---------GKGPSDEDAE---------------LVRKWFIG 126
Query: 473 LDFI----AANVILN--------LTYDIQHFTNAVHWQATQSKMMKDGM--KIEVRHVKK 518
++F + ++N L D+ N+ ++ + + D + + V++VKK
Sbjct: 127 MEFDRNPNSLTTVVNHACTEKPTLNVDLSENINSFE-KSIERGLSNDDLTNTVTVKYVKK 185
Query: 519 KQLSEYLPAHMLKKDKK 535
QL +++ A + + K+
Sbjct: 186 SQLHQFVSAEDMDEIKR 202
>gi|414888166|tpg|DAA64180.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888167|tpg|DAA64181.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 265
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 250 LGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVW 309
LG+ G+ A+L A +C+ +P+A+ S L FF F+ W W PV L L
Sbjct: 11 LGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCL----- 65
Query: 310 DPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDK 369
LMPI+ P P + V+ + ++EE +G ++ D W
Sbjct: 66 ------HSEGRLMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSW 119
Query: 370 LFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLER 416
LFE + KY+ +L + + + + +W G ++S+ R LI LER
Sbjct: 120 LFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER 166
>gi|71657771|ref|XP_817395.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70882585|gb|EAN95544.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 406
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 30/191 (15%)
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQP---------VLLKKPDNV--NLGFPVWDPRVNVAD 317
+PN A+ +V +FF ++ W P P + L + V NLG WDPR + +D
Sbjct: 5 HPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRG-WDPRESKSD 63
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTI-----------SEDIYNGKTM 366
L P++TPA P N+ FNV+++ + EF +G I ++ + +
Sbjct: 64 AMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGI 123
Query: 367 WDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHL-IGNLERNPHI--NLA 423
W +L E FF ++++YL ++ S AE + +ESK+R L G E + N+
Sbjct: 124 WSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAESRGYALENVR 183
Query: 424 HV----NPECY 430
HV NP Y
Sbjct: 184 HVRIRLNPRRY 194
>gi|345562420|gb|EGX45488.1| hypothetical protein AOL_s00169g94 [Arthrobotrys oligospora ATCC
24927]
Length = 1237
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 118/265 (44%), Gaps = 24/265 (9%)
Query: 105 KIYTFGSYRLGVHHKGADIDALCV-----------APRHVDRADYFSSFFEKLKTVD--E 151
++ GS+ LG + +D D L + A + + R ++ L + D
Sbjct: 622 RLVPVGSFGLGTYTSTSDTDILAIGSISTPLFWRIAKQRIKRFRGKAADSSSLTSSDALS 681
Query: 152 VTDLRAVEEAFVPVIKMNFDGIEIDMLFAR-LALKEIPDDMDLRD-DMLLKNLDQKCVRS 209
V +R V+ +I + D I ID+ + +++ D + + + L NL ++
Sbjct: 682 VKIVRYVDATIPMLILLIGDKIRIDLQYTTAVSVLSNFDTIPFQPLNSPLWNLTVPTLKK 741
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
L R +L +PN+ +RLA R IKLWA+K G+YS+ G+ GGV ++L+AR+ L
Sbjct: 742 LQAWRDLLFLLSRIPNLAKYRLAYRFIKLWAEKKGVYSSKFGFFGGVHISLLLARVAMLL 801
Query: 270 -PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
P A AS L+ FF +S KW V+ L R A R M I+T
Sbjct: 802 PPTATASQLIAAFFTHYSTTKWDDSVIFMPGTGKVL-------RYQRATR-DKMVILTIN 853
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQG 353
P N N +I T + E ++
Sbjct: 854 TPVINVAANATIHTVHTLSSELEKA 878
>gi|326471780|gb|EGD95789.1| hypothetical protein TESG_03255 [Trichophyton tonsurans CBS 112818]
Length = 1212
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 177/417 (42%), Gaps = 51/417 (12%)
Query: 18 DGKPQSQAPVTYGMTTALNL-SPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSK 76
D +S+A + T L L S P+ L ++ L+ ++ +E++ R V++
Sbjct: 566 DSLTESKASESVSQETPLQLASLPDTL--SSLDKMVSSLEDSSMLPGEEDIVIRKTVVAT 623
Query: 77 LNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA 136
L ++ E I + S P V + GSY LG +D+D LC+ +
Sbjct: 624 LAQILTEPIHDASGKDIKTPLV-------LIPVGSYGLGTWGPRSDVDCLCIGA--ISST 674
Query: 137 DYFSSFFEKLKTVDE--VTDLRAVEEAFVPVIKMNFDGIEIDMLF---ARLA-----LKE 186
+F+ ++L+ + +R V+ A ++++ I++D+ + A++A +
Sbjct: 675 TFFALAIQRLRKASALGIRIVRKVKAATGVMLELQSGHIKLDLQYCPAAKIAERWQEVSR 734
Query: 187 IPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIY 246
IP + D L + L R + + R+VP++ FRLA R I WAK G+Y
Sbjct: 735 IPSHDPIFD------LSLHSLSKLQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVY 788
Query: 247 SNVLGYLGGVSWAMLVARICQL----YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNV 302
S+ G LGG+ M+++R+ QL + LV FF ++ + W +++
Sbjct: 789 SSKFGLLGGIHITMMLSRLHQLIHERFGRVTVPELVAMFFHHYAHFDWKNNMVVS----- 843
Query: 303 NLGFPVWDPRVNVADRYHL---MPIITPAYPQQNSTFNVSI-STRTIMQEEFKQGKTISE 358
P V+ R L M I+T P N V+ S RTI+ + + I E
Sbjct: 844 --------PGVHTRYRRSLREPMVILTAHVPTVNVARAVTAPSLRTIVSAFKRAEELIGE 895
Query: 359 DIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
D + + + + N T +L S + +++ G ++ LIG LE
Sbjct: 896 DGAKWSNILNDISISQNNQTGAEKFLAAYNSYIKV--NVQYWGPSPTQTSSLIGWLE 950
>gi|326484937|gb|EGE08947.1| DUF455 domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 1212
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 177/417 (42%), Gaps = 51/417 (12%)
Query: 18 DGKPQSQAPVTYGMTTALNL-SPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSK 76
D +S+A + T L L S P+ L ++ L+ ++ +E++ R V++
Sbjct: 566 DSLTESKASESVSQETPLQLASLPDTL--SSLDKIVSSLEDSSMLPGEEDIVIRKTVVAT 623
Query: 77 LNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA 136
L ++ E I + S P V + GSY LG +D+D LC+ +
Sbjct: 624 LAQILTEPIHDASGKDIKTPLV-------LIPVGSYGLGTWGPRSDVDCLCIGA--ISST 674
Query: 137 DYFSSFFEKLKTVDE--VTDLRAVEEAFVPVIKMNFDGIEIDMLF---ARLA-----LKE 186
+F+ ++L+ + +R V+ A ++++ I++D+ + A++A +
Sbjct: 675 TFFALAIQRLRKASALGIRIVRKVKAATGVMLELQSGHIKLDLQYCPAAKIAERWQEVSR 734
Query: 187 IPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIY 246
IP + D L + L R + + R+VP++ FRLA R I WAK G+Y
Sbjct: 735 IPSHDPIFD------LSLHSLSKLQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVY 788
Query: 247 SNVLGYLGGVSWAMLVARICQL----YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNV 302
S+ G LGG+ M+++R+ QL + LV FF ++ + W +++
Sbjct: 789 SSKFGLLGGIHITMMLSRLHQLIHERFGRVTVPELVAMFFHHYAHFDWKNNMVVS----- 843
Query: 303 NLGFPVWDPRVNVADRYHL---MPIITPAYPQQNSTFNVSI-STRTIMQEEFKQGKTISE 358
P V+ R L M I+T P N V+ S RTI+ + + I E
Sbjct: 844 --------PGVHTRYRRSLREPMVILTAHVPTVNVARAVTAPSLRTIVSAFKRAEELIGE 895
Query: 359 DIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLE 415
D + + + + N T +L S + +++ G ++ LIG LE
Sbjct: 896 DGAKWSNILNDISISQNNQTGAEKFLAAYNSYIKV--NVQYWGPSPTQTSSLIGWLE 950
>gi|358396858|gb|EHK46233.1| hypothetical protein TRIATDRAFT_89627 [Trichoderma atroviride IMI
206040]
Length = 1209
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 188/455 (41%), Gaps = 64/455 (14%)
Query: 22 QSQAPVTYGMTTALNLSP----------PN-QLDLQRT-------RELAECLKPYNVSET 63
QS A +G+ L LSP PN Q++L + EL L T
Sbjct: 550 QSFASDHWGIRCLLTLSPREEGNLAQSSPNFQVNLHKAALSLGNFEELKASLVSSGQFPT 609
Query: 64 DEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADI 123
E + R E + L ++ E ++A+ KV + GS+ LGV +DI
Sbjct: 610 TAEANLRKEAIDLLQRILIEEDATAAVAE-----TRSKVQLVLIPVGSFGLGVWTDLSDI 664
Query: 124 DALCVAPRHVDRADYFSSFFEKLK--TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAR 181
D LCV ++ +F+ +KL+ + + V LR V ++++ GI+ D+ +
Sbjct: 665 DCLCVG--NISTRVFFNLAVQKLRKASAEGVKILRRVMANTGTMLELEIRGIKFDLQYCA 722
Query: 182 LAL--KEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLW 239
A + PD + + L + + L R + R +P++ +R+A IK W
Sbjct: 723 AAAIAQGYPDVLKRPSSDPVFALPLQTLAKLKPARDLFYLRRSIPDMTKYRVAHLFIKAW 782
Query: 240 AKKHGIYSNVLGYLGGVSWAMLVARICQLYPN--AAAST--LVCKFFLVFSQWKWPQPVL 295
A+ G+Y+ G LGG+ + ++ IC+ N A ST ++ FF +S++ W +
Sbjct: 783 AQSRGLYAAKYGMLGGIHISSMLVPICKALANESEAVSTADILTTFFQHYSKFNWETGM- 841
Query: 296 LKKPDNVNLGFPVWDPRVNVADRYHLM---PIITPAY--PQQNSTFNVSISTRTIMQEEF 350
V+DP ++ +YH P+ + P N+ SIST + E
Sbjct: 842 ------------VFDPFYHLGLKYHRTFREPLCLLGWHGPSLNAASTASISTVNALTSEL 889
Query: 351 KQGKTI--SEDIYNGKTMWDKLFETP---------NFFTKYRHYLVLIASSVSAEDQ--L 397
+ + +D+ + + + TP +F YR Y+ + A + Q
Sbjct: 890 VRAAALFHQQDVTWSRFLGLEQSATPLTLIEKGAADFLNSYRSYIKISARYWGSSQQKGR 949
Query: 398 EWCGLIESKVRHLIGNLERNPHINLAHVNPECYTD 432
++ G +ES+ ++ ++ R + + P + D
Sbjct: 950 KYLGWLESRCISILVDISRKSPSLIPRMWPARFAD 984
>gi|302882405|ref|XP_003040113.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
gi|256720980|gb|EEU34400.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
Length = 1208
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 157/360 (43%), Gaps = 42/360 (11%)
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK--TVDEVTDLRAVEEAFVPVIK 167
GSY LGV +DID LC+ + +F+ ++L+ + LR V+ +++
Sbjct: 648 GSYGLGVWTSSSDIDCLCIG--SISPKIFFALAVQRLRRAVTGGIRILRRVKANSGYMLE 705
Query: 168 MNFDGIEIDMLFARLA--LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPN 225
+ GI++D+ + A + P+ M L + + L R + R +P+
Sbjct: 706 LEVHGIKMDLQYCAAASIAERWPEVMKRPASDPAFALPFQTLAKLKPVRDLFYLRRSIPD 765
Query: 226 IENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAST----LVCKF 281
+ +R+A IK WA+ GIYS G+LGG+ ++L+A +C++ N A+ ++ F
Sbjct: 766 MVQYRMAHLFIKAWAQSRGIYSAKFGFLGGIHISVLLAPLCKMLANDGATVSTADIIFTF 825
Query: 282 FLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM---PIITPAY--PQQNSTF 336
F ++++ W + V+DP + RY+ P+ + P N+
Sbjct: 826 FQHYARFSWKTAL-------------VFDPFFHKDLRYNRTFREPLCLLGWHAPALNTAV 872
Query: 337 NVSISTRTIMQEEFKQG-KTISEDIYNGKTMWDKLFETP----------NFFTKYRHYLV 385
N S+ T + EF++ + +S + ++ + ++P F Y+ Y+
Sbjct: 873 NASVPTVDAIAAEFERAERLLSVENFSWSNLLGVEPDSPPSSLSGPGATEFLQNYKSYIK 932
Query: 386 LIAS--SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGS 443
+ A S E + G +ES+ L+ +L+R A + P + D + G G+
Sbjct: 933 IDAHYWGPSQEKSGRFIGWLESRCVMLLVDLDRKVKNIHARIWPARFLDMASSV-EGPGT 991
>gi|358389108|gb|EHK26701.1| hypothetical protein TRIVIDRAFT_59177 [Trichoderma virens Gv29-8]
Length = 1215
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 156/365 (42%), Gaps = 41/365 (11%)
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK--TVDEVTDLRAVEEAFVPVIK 167
GS+ LGV +DID LCV ++ +FS +KLK + + LR V +++
Sbjct: 655 GSFGLGVWTSLSDIDCLCVG--NISSKTFFSLAVQKLKKASTSGIKILRRVMANTGTMLE 712
Query: 168 MNFDGIEIDMLFARLAL--KEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPN 225
+ GI D+ + A + PD + + +L + + L R + R +P+
Sbjct: 713 LEIHGIRFDLQYCAAAAIAQGYPDVLKRPASDPVFSLPVQSIAKLKPARDLVYLRRSIPD 772
Query: 226 IENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPN--AAAST--LVCKF 281
+ +R+A IK WA+ G+YS G LGG+ L+ +C+ N AAST ++ F
Sbjct: 773 MTKYRVAHLFIKAWAQSRGLYSAKFGLLGGIHITSLLVPVCKALANEPEAASTADILTSF 832
Query: 282 FLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM---PIITPAY--PQQNSTF 336
F +S + W V V+DP + +YH P+ + P N+
Sbjct: 833 FYHYSTFDWETGV-------------VFDPFYHRDLKYHRTFREPLCLLGWHGPSLNTAS 879
Query: 337 NVSISTRTIMQEEFKQGKT-ISED-IYNGKTMWDKLFETP---------NFFTKYRHYLV 385
+ SIST + E + +S+D + K + +L TP +F Y+ Y+
Sbjct: 880 SASISTVNALASELTRAAALLSQDGMTWSKFLGLELSGTPSSLIEKGAADFLDSYQTYIK 939
Query: 386 LIASSVSAEDQ--LEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGS 443
+ A + Q ++ G +ES+ ++ ++ R + + P + D +
Sbjct: 940 ISARYWGSSQQKGRKYLGWLESRFISILVDISRKTLGLVPRIWPARFIDEDQTSGTSDEN 999
Query: 444 PEITA 448
E++A
Sbjct: 1000 SELSA 1004
>gi|353236816|emb|CCA68803.1| related to poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 1198
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 137/297 (46%), Gaps = 27/297 (9%)
Query: 105 KIYTFGSYRLGVHHKGADIDALCV---APRH---VDRADYFSSFFEKLKTVDEVTDLRA- 157
K+ GSY LGVH +DID L V +P+ + R+ + ++ T V LR
Sbjct: 611 KLEAVGSYALGVHTCESDIDCLAVGNISPQTFWLLARSRLLAQAKQQTGTGTTVVKLRRF 670
Query: 158 VEEAFVPVIKMNFDGIEIDMLFA---RLALK--EIPDDMDLRDDMLLKNLDQKCVRSLNG 212
V++A V ++++ GI+ID+ + +L + EIP+ + D L L + +L+
Sbjct: 671 VKDAAVQMMELEAHGIKIDLQYCVAPKLVERWSEIPE---IPVDSPLFALPASSLVTLSA 727
Query: 213 CRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNA 272
R + R++P++ F A R +KL+ + G+ GYLGG +L+ R+ P++
Sbjct: 728 YRDVLILRRVIPSLSAFVKAHRALKLFLSRRGLVGARFGYLGGFHLTLLLTRVAITLPHS 787
Query: 273 A---ASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
A A LV F ++ W W Q + P +G + V + M +++ +
Sbjct: 788 AGRSAPHLVEAFLREYAVWDWTQDTVHPIPAAAAVGTGAYKRVV----QREPMAVLSISK 843
Query: 330 PQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETP--NFFTKYRHYL 384
PQ+N N S ++ + +T + + +G T D P +F +YR ++
Sbjct: 844 PQKNIASNASWNSVASLSHGL---QTANATLQSGGTWLDVCGTNPLKSFIDEYRSFV 897
>gi|346325053|gb|EGX94650.1| DUF455 domain protein [Cordyceps militaris CM01]
Length = 1223
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 146/355 (41%), Gaps = 43/355 (12%)
Query: 102 VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVE 159
VG + GS+ LGV +D+D LC+ + +F ++L+ + + LR V
Sbjct: 647 VGLVLVPVGSFGLGVWMSSSDVDCLCIGT--ISSKTFFRMALQRLRKASDQGIRVLRKVL 704
Query: 160 EAFVPVIKMNFDGIEIDMLF--ARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTD 217
++++ GI+ D+ + A ++ P M+L + +L + + L R
Sbjct: 705 ANTGTMLELQILGIKFDLHYCAATSVFEKFPSVMNLPSNHPEFSLPVQTLAKLKPARDMY 764
Query: 218 EILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ----LYPNAA 273
+LR +P++ FR+A IK WA GIY G LGG+ +L+ IC+ L +
Sbjct: 765 YLLRSIPDLAKFRVAFLMIKAWASSRGIYGARFGLLGGIHITVLLVPICKQLATLSRVVS 824
Query: 274 ASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLM---PIITPAY- 329
+ ++ FF ++ + W + V+L DP + RYH P +
Sbjct: 825 TTGILATFFSHYTNFDWEKQVVL-------------DPFFHKELRYHRTSREPFCLLGWH 871
Query: 330 -PQQNSTFNVSIST-RTIMQEEFKQGKTISEDIYNGKTMWDKLF--------ETPNFFTK 379
P N+ S T ++I E K +S+ WD + +F
Sbjct: 872 APALNTAMTASTPTVKSIATEISKTNSLLSQP----GVTWDAILGPVGAAVAGVQDFLRG 927
Query: 380 YRHYLVLIAS--SVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTD 432
++ Y+ + A S ++ G +ES+ ++ ++ R L + P + D
Sbjct: 928 FKSYVKVDARFWGSSPSSGRKFLGWLESRCVAILVDMNRKAPALLPRIWPGRFID 982
>gi|169617838|ref|XP_001802333.1| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
gi|160703499|gb|EAT80511.2| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
Length = 1179
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 143/350 (40%), Gaps = 52/350 (14%)
Query: 31 MTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSI 90
M AL + P L ++ EL L + ++EE+ R + L L +V +
Sbjct: 594 MKIALKRAGPC---LSQSAELDSVLASGGMFPSEEEVQQRKDALEILKRVVYGTSSDDVT 650
Query: 91 AKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKL-KTV 149
+ + P + I GSY LGV G+DID LC+ + +F ++L K
Sbjct: 651 STSDVPMI-------IVPVGSYALGVWTSGSDIDCLCIGT--ISSKTFFKLARQRLVKAH 701
Query: 150 DE-VTDLRAVEEAFVPVIKM--NFDGIEI-DMLFARLALKEIPDDMDLRDDMLLKNLDQK 205
D+ V LR VE ++++ F G+ D +F NL
Sbjct: 702 DQGVRVLRKVEANTGTMLELWSEFAGLPASDPIF---------------------NLSIL 740
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV--A 263
+R L R I R +P++ FRLA R IKLWA + GIYS GYLGGV +++ A
Sbjct: 741 SLRKLKPYRDLLYIQRTLPSLSAFRLAYRCIKLWAVRRGIYSAKFGYLGGVHITLMLSWA 800
Query: 264 RICQLYPNAA--ASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
C + + + A LV FF F+ + W ++ + F PR + + R
Sbjct: 801 AKCLAHDSGSITAPDLVSSFFHHFAHFNWTNDMMY------DAFFHKQKPRYHRSAR--- 851
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLF 371
P++ + NS ST + + K E + + W K F
Sbjct: 852 EPMVVLGFHAPNSNI-AHTSTLPGLHTLVSEMKAADEALSDPSMTWKKFF 900
>gi|302665431|ref|XP_003024326.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
gi|291188376|gb|EFE43715.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
Length = 1216
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 171/427 (40%), Gaps = 63/427 (14%)
Query: 50 ELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTF 109
E+ L+ ++ +E+ +R + L+ ++ E I + S P V +
Sbjct: 600 EIVSSLEDSSMLPGEEDFKTRKTAVDTLSQILTEPIHDSSGRDIKTPLV-------LIPV 652
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVEEAFVPVIK 167
GSY LG +D+D LC+ + +F+ ++L+ + +R V+ A +++
Sbjct: 653 GSYGLGTWGPRSDVDCLCIGA--ISSTTFFALAIQRLRKASALGIRIVRKVKAATGIMLE 710
Query: 168 MNFDGIEIDMLFARLA--------LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEI 219
+ I++D+ + A + IP + + D L + L R + I
Sbjct: 711 LQSGHIKLDLQYCPAANVAERWQEISRIPFNDPIFD------LPPHSLSELQPYRDQEYI 764
Query: 220 LRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY----PNAAAS 275
R+VP++ FRLA R I WAK G+YS+ G LGG+ M+++R+ QL A
Sbjct: 765 KRMVPDMYVFRLAHRCISQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLIHEKCGRVTAP 824
Query: 276 TLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL---MPIITPAYPQQ 332
LV FF ++ + W +++ P V R L M I+T P
Sbjct: 825 ELVAMFFHHYAHFDWKNNMVVS-------------PGVQTRYRRSLREPMVILTVHVPTI 871
Query: 333 NSTFNVSI-STRTI----------MQEEFKQGKTISEDI---YNGKTMWDKLFETPNFFT 378
N V+ S RTI M E+ + I DI +N +T +K N +
Sbjct: 872 NVARAVTAPSLRTIVSAFKRAEELMGEDGARWSNILNDISISHNNQTGAEKFLAAYNSYI 931
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIA 438
K + S A + W +ES+ L+ +L+R + P +T +
Sbjct: 932 KV-NVQYWGPSPTQASSLIGW---LESRFFRLLNDLDRQVLGIHGRIWPSRFTSIDATDS 987
Query: 439 NGSGSPE 445
G E
Sbjct: 988 ENDGETE 994
>gi|336471290|gb|EGO59451.1| hypothetical protein NEUTE1DRAFT_79561 [Neurospora tetrasperma FGSC
2508]
Length = 1329
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 149/355 (41%), Gaps = 45/355 (12%)
Query: 93 NIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVD-- 150
N PP + I GS+ LGVH +DID L + P +FS ++L+
Sbjct: 738 NQPPLI-------ITPVGSFALGVHTSSSDIDVLAIGP--FSTTTFFSLAIQRLRRAASS 788
Query: 151 -------EVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA--LKEIPDDMDLRD-DMLLK 200
+ LR + + +++++ I+ D+ + A P + +
Sbjct: 789 PLYSQEYQPKILRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHWPRILSTAPPGNAVW 848
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
+L + L R D + R VP++ FR A R ++ WAK G+Y+ GYLGG+ ++
Sbjct: 849 SLPALTLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISV 908
Query: 261 LVARICQLYP-------NAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRV 313
++AR+ + LV FF ++Q+ W + ++ D V F +
Sbjct: 909 MLARVYKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVY---DEVCPWFRQKREKG 965
Query: 314 NVADRY-----HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM-W 367
+ Y M ++ P N++ S+ + ++EEFK+ + + + G+ W
Sbjct: 966 GEKEVYKRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDL---LVKGEVKSW 1022
Query: 368 DKLFE---TPNFFTKYRHYLVLIAS--SVSAEDQLEWCGLIESKVRHLIGNLERN 417
+ + F T Y+ Y+ + +S+ ++ G +ES+ L+ +L R
Sbjct: 1023 KEFLKGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHRR 1077
>gi|350292383|gb|EGZ73578.1| hypothetical protein NEUTE2DRAFT_108297 [Neurospora tetrasperma FGSC
2509]
Length = 1330
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 149/355 (41%), Gaps = 45/355 (12%)
Query: 93 NIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVD-- 150
N PP + I GS+ LGVH +DID L + P +FS ++L+
Sbjct: 739 NQPPLI-------ITPVGSFALGVHTSSSDIDVLAIGP--FSTTTFFSLAIQRLRRAASS 789
Query: 151 -------EVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA--LKEIPDDMDLRD-DMLLK 200
+ LR + + +++++ I+ D+ + A P + +
Sbjct: 790 PLYSQEYQPKILRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHWPRILSTAPPGNAVW 849
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
+L + L R D + R VP++ FR A R ++ WAK G+Y+ GYLGG+ ++
Sbjct: 850 SLPALTLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISV 909
Query: 261 LVARICQLYP-------NAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRV 313
++AR+ + LV FF ++Q+ W + ++ D V F +
Sbjct: 910 MLARVYKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVY---DEVCPWFRQKREKG 966
Query: 314 NVADRY-----HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM-W 367
+ Y M ++ P N++ S+ + ++EEFK+ + + + G+ W
Sbjct: 967 GEKEVYKRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDL---LVKGEVKSW 1023
Query: 368 DKLFE---TPNFFTKYRHYLVLIAS--SVSAEDQLEWCGLIESKVRHLIGNLERN 417
+ + F T Y+ Y+ + +S+ ++ G +ES+ L+ +L R
Sbjct: 1024 KEFLKGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHRR 1078
>gi|162448422|ref|YP_001610789.1| polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
gi|161159004|emb|CAN90309.1| Polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
Length = 961
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 132/328 (40%), Gaps = 37/328 (11%)
Query: 103 GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAF 162
GG ++ GS RLG GAD+D + P +D + + + E + +R VE
Sbjct: 588 GGALHVTGSRRLGCALPGADLDLVAALPGPID---LDAVEVQVRSALPEASTVRRVEAIR 644
Query: 163 VPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKN---LDQKCVRSLNGCRVTDEI 219
VP +++ G++ D+ D +R + + L + +L+ D +
Sbjct: 645 VPCLELCAVGLDADLTLV--------DAGAVRPEHAVARRLELGEAAAMALSAVTDADAL 696
Query: 220 LRLV----------PNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
L V E F R +K WA+ GI + G L G++W +L AR+
Sbjct: 697 LEAVDAASAPSAAPRRREAFLALGRAVKAWARAKGIDAAPFGGLPGIAWLVLAARVVCDA 756
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY 329
P+ L+ +FF ++ W + +P+ L P +G P DP + I TP
Sbjct: 757 PDLEPGPLLSRFFGAWAAWDFRRPIAL-DPSAPAVGTPG-DP----------VRIATPTA 804
Query: 330 PQQNSTFNVSISTRTIMQEE-FKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
P ++ + V + + +E + + + + G+ L P ++ + V+
Sbjct: 805 PVRSCSDTVGAAALATLSDELYSAWEAVESALAAGRDPLPDLLAPPPLHRRHAAWAVITV 864
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLER 416
+ E G + ++R L+ + ER
Sbjct: 865 EAPEPEGVASGLGWVRGRIRALLSSFER 892
>gi|341888961|gb|EGT44896.1| hypothetical protein CAEBREN_24044 [Caenorhabditis brenneri]
Length = 224
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 19/144 (13%)
Query: 53 ECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSY 112
+ LK + E E+ R+ V+ KL ++ WIK + IA + K GK FG Y
Sbjct: 2 QTLKEFKSFEPIEDTEKRVTVIKKLTDIGNTWIKMI-IASRVSKGSNVKTEGKCVAFGFY 60
Query: 113 RLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDG 172
LGVH G DID++ +AP ++ L A AFV ++ M DG
Sbjct: 61 WLGVHSSGGDIDSVLIAPSS------------------KIKKLNAAGNAFVLLMTMECDG 102
Query: 173 IEIDMLFARLALKEIPDDMDLRDD 196
+E+D+L A + L IP ++DL D
Sbjct: 103 VEVDLLIACMDLATIPANLDLTSD 126
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 463 SGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLS 522
S S+ FIGL+F N L+LT +I++F V +A + D +++++ +VK+ L
Sbjct: 145 SKTQSVLFIGLEFTDVNKNLDLTTEIENFKKTVDEKAKMQVALGD-VQLDISYVKRANLI 203
Query: 523 EYLPAHMLKK 532
+ +PA KK
Sbjct: 204 KIIPAAEQKK 213
>gi|297192707|ref|ZP_06910105.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297151463|gb|EFH31180.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 359
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 28/259 (10%)
Query: 104 GKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFV 163
G ++ GS R+G GAD+D + P + A + L E T +R V A V
Sbjct: 25 GCVHLVGSRRMGCELPGADLDLVAALPGSPELAGVRARLTAALP---EATGVREVVGARV 81
Query: 164 PVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLV 223
P ++M+ G+ +D++ + + + R + L + +L+ D +L V
Sbjct: 82 PGLRMSVGGLAVDLVVVATGAVDPAEAVGRRTE-----LGEDAAIALSAVSDADALLDQV 136
Query: 224 PNI-ENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFF 282
+ E F R +K WAK G+ S G L G++W++L AR + + L+ FF
Sbjct: 137 ADRREAFTDLARRVKAWAKARGLDSAPFGGLPGLAWSVLAARTVREAGALPSDELLRHFF 196
Query: 283 LVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSIST 342
++ W W +PV P +L M ++TP P + + V+
Sbjct: 197 ATWAAWDWREPV--GGPARPDL----------------PMTVMTPTAPVRPCSDQVTEGM 238
Query: 343 R-TIMQEEFKQGKTISEDI 360
R I QE F+ + + D
Sbjct: 239 RDLITQELFRAWEVLDGDF 257
>gi|171688608|ref|XP_001909244.1| hypothetical protein [Podospora anserina S mat+]
gi|170944266|emb|CAP70376.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 8/196 (4%)
Query: 54 CLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYR 113
CL NV+ +EE + R E L L+ + + A + V + GSY
Sbjct: 360 CLSELNVTPGEEEAAQRREAFELLKTLLLDATTKTPAAARLQSFVV------VVPVGSYA 413
Query: 114 LGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGI 173
LGV +DID C+ P + +S + V +LR V+ ++++ G+
Sbjct: 414 LGVWTTSSDIDVCCIGPFSSNTLFSVASSSLRKAATQGVRNLRRVKANTGTMLELEVQGV 473
Query: 174 EIDMLFARLA--LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRL 231
+D+ + A ++ P+ + L + +L + + L R D + R +P+IE+FRL
Sbjct: 474 RMDLQYCPAASVAQQWPNVLRLPAKDPVWSLAPQTLNKLKAIRDIDYLRRSLPDIESFRL 533
Query: 232 ALRTIKLWAKKHGIYS 247
A R IK WA+ G+YS
Sbjct: 534 AHRFIKTWARSRGVYS 549
>gi|164429482|ref|XP_001728545.1| hypothetical protein NCU11050 [Neurospora crassa OR74A]
gi|157073494|gb|EDO65454.1| predicted protein [Neurospora crassa OR74A]
Length = 1368
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 149/355 (41%), Gaps = 45/355 (12%)
Query: 93 NIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVD-- 150
N PP + I GS+ LGVH +DID L + P +FS ++L+
Sbjct: 777 NQPPLI-------ITPVGSFALGVHTSSSDIDVLAIGP--FSTTTFFSLAIQRLRRASSS 827
Query: 151 -------EVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA--LKEIPDDMDLRD-DMLLK 200
+ LR + + +++++ I+ D+ + A P + +
Sbjct: 828 PLYSQEHQPKILRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHWPRILSTAPPGNAVW 887
Query: 201 NLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAM 260
+L + L R D + R VP++ FR A R ++ WAK G+Y+ GYLGG+ ++
Sbjct: 888 SLPALTLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISV 947
Query: 261 LVARICQLYP-------NAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRV 313
++AR+ + LV FF ++Q+ W + ++ D V + +
Sbjct: 948 MLARVYKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVY---DEVCPWLRLKREKG 1004
Query: 314 NVADRYH-----LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTM-W 367
+ Y M ++ P N++ S+ + +++EFK+ + + + G+ W
Sbjct: 1005 GEKEVYRRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKDEFKRARDL---LVKGEVKSW 1061
Query: 368 DKLFE---TPNFFTKYRHYLVLIAS--SVSAEDQLEWCGLIESKVRHLIGNLERN 417
+ + F T Y+ Y+ + +S+ ++ G +ES+ L+ +L R
Sbjct: 1062 KEFLKGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHRR 1116
>gi|254385996|ref|ZP_05001313.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
gi|194344858|gb|EDX25824.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
Length = 649
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 137/360 (38%), Gaps = 61/360 (16%)
Query: 104 GKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFV 163
G ++ GS R+G GAD+D + P V A+ L E LR V A V
Sbjct: 295 GVVHLAGSRRMGCARPGADLDLVAALPGAVGGAEVRERIAAALP---EAERLREVRGARV 351
Query: 164 PVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDM-------LLKNLDQKCVRSLNGCRVT 216
P ++ G+++D++ + + R ++ L D VR G
Sbjct: 352 PGLRFRVAGLDVDLVVVATGGLDPAGALARRAELGEAAAVALSAVSDADAVRESVGAE-- 409
Query: 217 DEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ----LYPNA 272
+ RLA R +K WA+ G+ S G L G++WA+L AR + L P+
Sbjct: 410 --------HAAFARLA-REVKAWARARGLDSAPFGGLPGIAWAVLAARTVREAAALSPDG 460
Query: 273 AAS------TLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIIT 326
+ L+ +FF ++ W W PV L P P + V V +T
Sbjct: 461 LSPDGLSLDGLLREFFGAWAAWDWCDPVALHHPPPA----PGSEGAVTV---------LT 507
Query: 327 PAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDK-LFETPNFFTKYRHYLV 385
P+ P ++ T V R ++ E + W+ P ++ + V
Sbjct: 508 PSEPVRSCTAQVGPGLRDLLGRELYE-------------AWESPQAGPPAPHRRHAAWAV 554
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY--TDTTGVIANGSGS 443
+ + ++ E G ++R L+G LE + AH P + DT A G G+
Sbjct: 555 VTVRGATPQEFEESLGRTRGRLRALLGALEEG-GVAEAHAWPRPFERGDTVARYAIGLGA 613
>gi|302499068|ref|XP_003011530.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
gi|291175082|gb|EFE30890.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
Length = 1209
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 172/421 (40%), Gaps = 71/421 (16%)
Query: 50 ELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTF 109
E+ L+ ++ +E+ +R + L+ ++ E I + S P V +
Sbjct: 600 EIVSSLEHSSMLPGEEDFKTRKTAVDTLSQILTEPIHDSSGRDIKTPLV-------LIPV 652
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVEEAFVPVIK 167
GSY LG +D+D LC+ + +F+ ++L+ + +R V+ A +++
Sbjct: 653 GSYGLGTWGPRSDVDCLCIGA--ISSTTFFALAIQRLRKASALGIRIVRKVKAATGVMLE 710
Query: 168 MNFDGIEIDMLFARLA--------LKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEI 219
+ I++D+ + A + IP + D L + L R + I
Sbjct: 711 LQSGHIKLDLQYCPAANVAERWQEISRIPSHDPIFD------LSLHSLSKLQPYRDQEYI 764
Query: 220 LRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL----YPNAAAS 275
R+VP++ FRLA R I AK G+YS+ G LGG+ M+++++ QL +
Sbjct: 765 KRMVPDMYVFRLAYRCIVQRAKSSGVYSSKFGLLGGIHITMMLSQLHQLVHEKFGRVTVP 824
Query: 276 TLVCKFFLVFSQWKWPQPVL------------LKKPDNVNLGFPVWDPRVNVADRYHLMP 323
LV FF ++ + W ++ L++P + V P +NVA
Sbjct: 825 ELVSMFFHYYAHFDWKNNMVVSPGVQTRYRRSLREPMVI---LTVHVPTINVA-----RA 876
Query: 324 IITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDI---YNGKTMWDKLFETPNFFTKY 380
+ P+ S FN +M E+ + I DI +N +T +K F T Y
Sbjct: 877 VTAPSLRTIVSAFN---RAEELMGEDGARWSNILNDISISHNNQTGAEK------FLTAY 927
Query: 381 RHYLVLIA-----SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYT--DT 433
Y+ + S A + W +ES+ L+ +L+R + P +T DT
Sbjct: 928 NSYIKVNVQYWGPSPTQASSLIGW---LESRFFRLLNDLDRQALGIHGRIWPARFTSIDT 984
Query: 434 T 434
T
Sbjct: 985 T 985
>gi|194381112|dbj|BAG64124.1| unnamed protein product [Homo sapiens]
gi|194382572|dbj|BAG64456.1| unnamed protein product [Homo sapiens]
Length = 310
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 468 MWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSE 523
MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI HVK+KQL +
Sbjct: 1 MWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQ 60
Query: 524 YLPAHMLKKDKK 535
LP H+L+K KK
Sbjct: 61 LLPNHVLQKKKK 72
>gi|407922599|gb|EKG15696.1| Endonuclease/exonuclease/phosphatase [Macrophomina phaseolina MS6]
Length = 1142
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 129/302 (42%), Gaps = 46/302 (15%)
Query: 138 YFSSFFEKLK--TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI----PDDM 191
+F+ + LK +V LR VE ++++N GI +D+ + A +I P +
Sbjct: 616 FFTLAVKHLKNAAAQDVRILRKVEAHSGTMLELNIQGIRLDLQYC--AAAQIAGCWPAPL 673
Query: 192 DLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLG 251
L L +L + + L R + P++ F++A R + +WA+ GIY+ G
Sbjct: 674 SLPPTDPLFSLPLQTLSKLKAIRDLAHLQNTTPDLPAFQMAYRLLVVWARSRGIYAARFG 733
Query: 252 YLGGVSWAMLVARICQLY----PNAAASTLVCKFFLVFSQWKWPQ-----PVLLKKPDNV 302
YL G ++++ RI +L + A+ LVC FF ++++ W + P+ P
Sbjct: 734 YLSGTHISLMLDRIAKLLYHSNRDVTAADLVCAFFRYYAEFDWSKNTVEDPLARAIP--- 790
Query: 303 NLGFPVWDPRVNVADRYHLMPIITPAY--PQQNSTFNVSISTRTIMQEEFKQGKT-ISED 359
+G P R+ P++ Y P+ N ++ ++ EE ++ +++
Sbjct: 791 GMGRPY--------QRHASEPMVVLGYHIPRVNIARAATVPAVGVLTEELQRAHALVTKQ 842
Query: 360 IYNGKT-MWDKLF-----ETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGN 413
G T W ++ F + YR Y+ + +++ G K R LIG
Sbjct: 843 PEQGSTPTWAEIIGEERNSAAEFLSAYRSYIRV---------DVQYWGTSSVKGRQLIGW 893
Query: 414 LE 415
+E
Sbjct: 894 VE 895
>gi|46805331|dbj|BAD16850.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 70.5 bits (171), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 233 LRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAS 275
LR +K WAK G+YSNV G+LGG+ WA+LVAR+CQLYPN + +
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYPNTSPA 44
>gi|56785136|dbj|BAD81791.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 69.7 bits (169), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 233 LRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAS 275
LR +K WAK G+YSNV G+LGG+ WA+LVAR+CQLYPN + +
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 44
>gi|302532764|ref|ZP_07285106.1| polynucleotide adenyltransferase [Streptomyces sp. C]
gi|302441659|gb|EFL13475.1| polynucleotide adenyltransferase [Streptomyces sp. C]
Length = 430
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 27/297 (9%)
Query: 104 GKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFV 163
G + T GS R+G GAD+D + V P D A + L LR V A V
Sbjct: 76 GLVRTVGSRRMGCALPGADLDLVAVLPGPADAAGVRARVAAALPGARR---LREVTGARV 132
Query: 164 PVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLV 223
P ++++ G+++D++ + + R L + +L+ D + V
Sbjct: 133 PGLRLHAYGLDVDLVLVGAGALDPGLAVARR-----AELGEAAAVALSALDDADAVRESV 187
Query: 224 -PNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAA----STLV 278
+ F R K WA+ G+ S G L G++WA+L AR + AA + L
Sbjct: 188 GASHAAFASLAREAKAWARARGLDSAPFGGLPGLAWAVLAARTVREAVRDAADLSPAGLR 247
Query: 279 CKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNV 338
+FF ++ W W +PV L D P DP + ++TP P ++ T V
Sbjct: 248 REFFGTWAAWDWSEPVSLLPADGAGR-SPSPDP----------VTVLTPRAPVRSCTAQV 296
Query: 339 SISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAED 395
R ++ E + + E +G +L P ++ + V+ + +A +
Sbjct: 297 GPGMRDLLVRELYRAWEVLEADPDGL---GRLTAPPPLHRRHAAWAVVTVRAGAAGE 350
>gi|407410523|gb|EKF32925.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 285
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 32/196 (16%)
Query: 242 KHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN 301
+ +Y N+ Y GV A++VAR+CQ+ P + + L+ FFL ++QW L + D
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARVCQVMPASHPNVLLRFFFLFYAQW-------LSRHDR 54
Query: 302 VN--------------LGFP-VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIM 346
++ G P WDPR + A R L+P+I PAYP N NVS +
Sbjct: 55 ISPVYITTSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVSRCGLEVF 113
Query: 347 QEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE------WC 400
E + + N +T + +++ N Y + V+ + ++ W
Sbjct: 114 YAELTYAHRL---LSNSETPLETIWKPFNILDNYSTFFVVNVTCEEETEEKLEAVLSVWS 170
Query: 401 GLIESKVRHLIGNLER 416
+ SK+R L+ LER
Sbjct: 171 SYVLSKLRILLYALER 186
>gi|407849942|gb|EKG04508.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 285
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 32/196 (16%)
Query: 242 KHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN 301
+ +Y N+ Y GV A++VARICQ+ P + + L+ FFL ++QW L + D
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQW-------LSRHDR 54
Query: 302 VN--------------LGFP-VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIM 346
++ G P WDPR + A R L+P+I PAYP N NV + +
Sbjct: 55 ISPVYITTSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCSLEVF 113
Query: 347 QEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE------WC 400
E + + N +T + ++E + Y + V+ + ++ W
Sbjct: 114 YAELTYAYRL---LSNLETPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWS 170
Query: 401 GLIESKVRHLIGNLER 416
+ SK+R L+ LER
Sbjct: 171 SYVLSKLRILLYALER 186
>gi|400596352|gb|EJP64126.1| endonuclease/Exonuclease/phosphatase protein [Beauveria bassiana
ARSEF 2860]
Length = 1233
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 10/203 (4%)
Query: 102 VGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDE--VTDLRAVE 159
VG + GSY LGV +D LC+ + +F ++L+ + + LR
Sbjct: 654 VGLILVPVGSYGLGVWTSSDHVDCLCIGT--MSSKTFFRMALQRLRKASDGGMRILRKAS 711
Query: 160 EAFVPVIKMNFDGIEIDMLF--ARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTD 217
+ ++K+ GI+ + + A +++ P M+L D L + + L R
Sbjct: 712 TSTGTMLKLQILGIKFTLHYCAATSIVEKYPRVMNLPSDHPEFALPVQTLAKLKPARDLY 771
Query: 218 EILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYP--NAAAS 275
+LR +P++ FR+A IK WA GIY G L G+ +L+ IC+ + A S
Sbjct: 772 YLLRSIPDLAKFRVAFLFIKAWASSRGIYGARFGLLSGIHITVLLVPICKQLAAISMAVS 831
Query: 276 T--LVCKFFLVFSQWKWPQPVLL 296
T ++ FF ++ +W V+L
Sbjct: 832 TTDILTTFFSHYADLEWETHVVL 854
>gi|71409419|ref|XP_807056.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70870970|gb|EAN85205.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 285
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 32/196 (16%)
Query: 242 KHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDN 301
+ +Y N+ Y GV A++VARICQ+ P + + L+ FFL ++QW L + D
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQW-------LSRHDR 54
Query: 302 VN--------------LGFP-VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIM 346
++ G P WDPR + A R L+P+I PAYP N NV +
Sbjct: 55 ISPVYITTSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCGLEVF 113
Query: 347 QEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLE------WC 400
E + + N +T + ++E + Y + V+ + ++ W
Sbjct: 114 YAELTYAYRL---LSNLETPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWS 170
Query: 401 GLIESKVRHLIGNLER 416
+ SK+R L+ LER
Sbjct: 171 SYVLSKLRILLYALER 186
>gi|355709244|gb|AES03527.1| poly polymerase gamma [Mustela putorius furo]
Length = 92
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 45/60 (75%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 33 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 92
>gi|433605790|ref|YP_007038159.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
gi|407883643|emb|CCH31286.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
Length = 892
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 120/314 (38%), Gaps = 59/314 (18%)
Query: 104 GKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK-TVDEVTDLRAVEEAF 162
G+++ GS R G D+D + VA + E+++ + + LR V A
Sbjct: 571 GEVHVVGSRRTGCALPDGDLDLITVA-------SAADAVAERVRVALPAASALRPVVGAR 623
Query: 163 VPVIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRL 222
P +++ G+ +D+ A + D + V + G RV
Sbjct: 624 SPGWRLDVGGLGVDLTVAVAGNPAAWSSLG----------DAEAVLAAVGDRV------- 666
Query: 223 VPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFF 282
+ FR R +K WA+ G+ S G + GV WA+L AR + + +FF
Sbjct: 667 ----DRFRRLAREVKGWARARGLDSAPFGGVPGVGWAVLAARTVLDAGDGFDGGGLAEFF 722
Query: 283 LVFSQWKWPQPVLLKK-PDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSIS 341
++ W W P+ L P+ G PV I+TPA P ++ T V
Sbjct: 723 GTWAAWDWRDPIGLGAVPERT--GAPV--------------TIMTPAAPVRSCTEQVGPG 766
Query: 342 TRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCG 401
R ++ E + + E G T L P+ + + V+ D++ G
Sbjct: 767 FRDLLTAELYRAWEVVE---AGGT---DLATPPDLHRVHAAWAVVTVP----HDRV---G 813
Query: 402 LIESKVRHLIGNLE 415
+ ++R L+ LE
Sbjct: 814 PVRGRLRALLTALE 827
>gi|320590446|gb|EFX02889.1| duf455 domain containing protein [Grosmannia clavigera kw1407]
Length = 498
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 47/230 (20%)
Query: 232 ALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNA----------AASTLVCKF 281
A R+IK WA+ G+Y+ GYLGG+ A+L+AR+ +L A A ++ F
Sbjct: 53 AYRSIKTWARSRGLYAARFGYLGGIQIAVLLARVMKLMAAATDDDDDDDSSAVPDILATF 112
Query: 282 FLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAY--PQQNSTFNVS 339
F ++ + W + D G P V A P++ Y PQ N++ + S
Sbjct: 113 FRDYAGFDWATQMAF---DPFFHGHKA--PHVRTAGE----PLVILGYHRPQLNTSMSAS 163
Query: 340 ISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFE-------------------TPNFFTKY 380
+S+ ++ E ++ + + G+ WD F Y
Sbjct: 164 VSSVRVLAAELRRADRL---LSAGRISWDAFLGGGGDEGDSSTIVAGRLLSGAATFVCAY 220
Query: 381 RHYLV--LIASSVSAEDQLEWCGLIESKVRHLIGNLERN-PHINLAHVNP 427
R Y+ L +S + + G +ES+ L+ ++ R P +N H+ P
Sbjct: 221 RTYVKIDLQYWGLSLQRGASFVGWLESRCAMLLVDVARRLPQLN-THIWP 269
>gi|403334159|gb|EJY66233.1| Poly(A) polymerase PAPalpha [Oxytricha trifallax]
Length = 665
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 140/321 (43%), Gaps = 58/321 (18%)
Query: 109 FGSYRLGVHHKGADIDALCVAPRHV-DRADYFSSFFEKLKTVDEVTDL--RAVEEAFVPV 165
FGS G K +DID L + + + R D+FS F LK+ EV + + + +A +P+
Sbjct: 119 FGSGMFGGFDKHSDIDVLLSSFKFLLSREDFFSKFSAYLKS-PEVGAIIHQEIPQAQIPI 177
Query: 166 IKMNFDGIEIDMLFARLALK-------EIPDDMDLRD--DMLLKNLDQKCVRSLNGCRVT 216
IK F + D+L+ + ++ D + +++ + +D R + C+
Sbjct: 178 IKFEFMSKQFDVLYCSMLTPISQHQRCQLEKDQYFFEFSNVVQEKVDVFSFRGWSNCQYM 237
Query: 217 DEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL-------- 268
E ++ + E F L+ IK WAKK G+Y GYL G+S +++ ++ ++
Sbjct: 238 YERIK---DKEAFGWGLKIIKAWAKKKGLYGFNFGYLNGISLIIMLGKVDKMIRRERFQS 294
Query: 269 ------------------YPNAAAST----------LVCKFFLVFSQWKWPQPVLLKKPD 300
PN + LV KFF V+S+W QP+ + +
Sbjct: 295 DYCDDTLSRNVNNQLSFTIPNRTLKSNNKIEDRVCELVTKFFEVYSKWDSKQPIFFQDNN 354
Query: 301 NVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDI 360
+ ++ ++ + + PI+TP P + +T ++ S+ + E+ + + + I
Sbjct: 355 SWSMDQDLYSVCLK-----EVFPIVTPERPYKCTTHQINTSSLNHIMEQLQTAQNLCILI 409
Query: 361 YNGKTMWDKL-FETPNFFTKY 380
+ + D + ++ N F K+
Sbjct: 410 QKRQLILDLVKYQNDNAFDKF 430
>gi|256396175|ref|YP_003117739.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
44928]
gi|256362401|gb|ACU75898.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
44928]
Length = 1007
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 116/327 (35%), Gaps = 61/327 (18%)
Query: 106 IYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPV 165
I+ GS R H ADID + P D + L V L A A VP
Sbjct: 683 IHLVGSRRTATHLPAADIDLVAAVPGAPDIGALERRVAKALGAGHRVRQLVA---ARVPG 739
Query: 166 IKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPN 225
+++ + D++ A D + R L + SL+ + ++ L P
Sbjct: 740 LRIVTPRLSADLVLAPTGDIPPADAVARR-----AELGETIASSLSAVSDAEALIALRPG 794
Query: 226 IENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVF 285
+R K WA+ G+ + LG L G++WA++ AR L FF +
Sbjct: 795 PH-----VRVAKAWARARGLDAAPLGGLPGLAWALMAARCRDL----------TDFFETW 839
Query: 286 SQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTI 345
+ W PI TP P ++ T +++ S R +
Sbjct: 840 AAHSWQD------------------------------PIPTPTAPIRDLTLHLTASMRDL 869
Query: 346 MQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV--LIASSVSAEDQLEWCGLI 403
+ EE G E + + L P ++R + V L A + A D LE G +
Sbjct: 870 ITEELYNGW---ETVTSTPDPLPTLLAPPPMHRRHRRWAVITLRADGIEARDVLE--GRV 924
Query: 404 ESKVRHLIGNLERNPHINLAHVNPECY 430
+ R L+ L+ + H P +
Sbjct: 925 RGRTRSLLSALDEA-GVTDTHAWPRAF 950
>gi|328847777|gb|EGF97110.1| hypothetical protein MELLADRAFT_87937 [Melampsora larici-populina
98AG31]
Length = 105
Score = 55.8 bits (133), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 52/93 (55%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P P TYG+T ++++ P + T L + LK E+ E+ +R VL +LN L
Sbjct: 6 PNGLLPKTYGVTGPISINGPTCPEGFSTTVLMDELKARCTFESPEDARAREFVLGRLNLL 65
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYR 113
VKE++ +VS A + VA + GG I+TFG ++
Sbjct: 66 VKEFVIKVSPALGMSDHVARETGGNIFTFGQFK 98
>gi|444729496|gb|ELW69909.1| Ras-associating and dilute domain-containing protein [Tupaia
chinensis]
Length = 1158
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 10 MQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSS 69
+ T Q G PQ YG+++ ++L+ P D + T++L E LKP+ V E +EEL S
Sbjct: 6 VSTQGSQQTGSPQKH----YGISSPISLAAPKDTDCELTQKLIETLKPFGVFEEEEELQS 61
Query: 70 RMEVLSKLNNL 80
R+ +L KLNNL
Sbjct: 62 RILILEKLNNL 72
>gi|218200294|gb|EEC82721.1| hypothetical protein OsI_27409 [Oryza sativa Indica Group]
Length = 293
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 321 LMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKY 380
MPI+ P P + T N++ T ++EE +G ++++ + W LF + TKY
Sbjct: 92 FMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKY 151
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANG 440
+L + + ++E+ +W G ++S+ R+LI LE + EC D+T + +
Sbjct: 152 EEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLES--------IGVECDPDSTEEVDHT 203
Query: 441 SGSPEITA 448
P I
Sbjct: 204 VFEPSIVC 211
>gi|62822128|gb|AAY14677.1| unknown [Homo sapiens]
Length = 270
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 33/50 (66%)
Query: 496 HWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
+ QA M+K+GMKIE HVKKKQL YLPA +L+K KK D N S+
Sbjct: 1 YRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 50
>gi|116196384|ref|XP_001224004.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
gi|88180703|gb|EAQ88171.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
Length = 891
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 206 CVRSLNGC----RVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
C RS + R TD + R +P+ FRLA R IK WAK GIY+ G+L G+ ++L
Sbjct: 625 CSRSRSTASSPWRDTDYLARSLPDPPTFRLAHRAIKTWAKSRGIYAARFGFLSGIQISIL 684
Query: 262 VARI 265
+AR+
Sbjct: 685 LARV 688
>gi|119620438|gb|EAX00033.1| poly(A) polymerase gamma, isoform CRA_e [Homo sapiens]
Length = 282
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 34/51 (66%)
Query: 495 VHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
++ QA M+K+GMKIE HVKKKQL YLPA +L+K KK D N S+
Sbjct: 1 MYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 51
>gi|18044597|gb|AAH19635.1| Papolg protein, partial [Mus musculus]
Length = 262
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 504 MMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELG-DKSR 562
M+KDGMKIE HVKKKQL YLPA +L+K KK+ S +S + +LD D SR
Sbjct: 3 MLKDGMKIEATHVKKKQLHHYLPAEILQKKKKSLSDVSRSSGGLQSKRSSLDSTCLDSSR 62
Query: 563 PRLDSDSNS 571
D+DS +
Sbjct: 63 ---DTDSGT 68
>gi|322692951|gb|EFY84832.1| Poly(A) polymerase type 3 [Metarhizium acridum CQMa 102]
Length = 274
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 107/271 (39%), Gaps = 61/271 (22%)
Query: 226 IENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY----PNAAASTLVCKF 281
+ + +A +K WAK G+YS+ LG LG ++ ++++ IC+L P+A + ++ F
Sbjct: 1 MAKYGIAHLLLKAWAKSRGLYSSKLGLLGSLNISVMLVPICKLLAYDGPSAGTTDILTTF 60
Query: 282 FLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL-----MPIITPAYPQQNSTF 336
F + + W ++L DP + +YH M ++ P +N+
Sbjct: 61 FHHYRNFDWKTNMVL-------------DPLFHGTVKYHRTQRESMCLLGWHTPSRNTAL 107
Query: 337 NVSISTRTIMQEE-FKQGKTISEDIYNGKTMWDKLFE---------------TPNFFTKY 380
N + ST I+ E + +S++ N WD F +
Sbjct: 108 NATASTIHILSAEIMRASDLLSQEGVN----WDTFLRGTQSLLPFPELTACNAAGFLDSH 163
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANG 440
+ Y+ + AS + G K + +G LE + L + P + D A+
Sbjct: 164 KCYIKMNAS---------YLGCSPRKGKRFVGWLESRCLMVLVDLQP--WKDDNAGYADS 212
Query: 441 SGSPEI----TAEGKEEGGENT----SPPVS 463
E+ + +GKEE T +PP S
Sbjct: 213 GEDSELDDNESDDGKEEPEAGTTIFLAPPSS 243
>gi|402577076|gb|EJW71033.1| hypothetical protein WUBG_18059 [Wuchereria bancrofti]
Length = 94
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 48/78 (61%)
Query: 12 TSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRM 71
T + + +GK G++ +++S P++ D+ + +L E L+ ET+EE++ R+
Sbjct: 11 TDRGNSNGKDNRLTTTYLGVSQPISISGPDEFDIVMSTKLDEYLQANGYFETEEEMNLRL 70
Query: 72 EVLSKLNNLVKEWIKEVS 89
+VLSK+N VK+W++ VS
Sbjct: 71 KVLSKINAYVKKWVRIVS 88
>gi|18606188|gb|AAH23030.1| Papolg protein, partial [Mus musculus]
Length = 262
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 507 DGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELG-DKSRPRL 565
DGMKIE HVKKKQL YLPA +L+K KK+ S +S + +LD D SR
Sbjct: 1 DGMKIEATHVKKKQLHHYLPAEILQKKKKSLSDVSRSSGGLQSKRSSLDSTCLDSSR--- 57
Query: 566 DSDSNS 571
D+DS +
Sbjct: 58 DTDSGT 63
>gi|125571299|gb|EAZ12814.1| hypothetical protein OsJ_02733 [Oryza sativa Japonica Group]
Length = 127
Score = 48.1 bits (113), Expect = 0.013, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 98 VAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF 139
+A++ + +FGSY LGVH +G+DID L V P +VDR D+F
Sbjct: 1 MADQATALVLSFGSYHLGVHSRGSDIDVLVVGPSYVDR-DFF 41
>gi|125526971|gb|EAY75085.1| hypothetical protein OsI_02979 [Oryza sativa Indica Group]
Length = 127
Score = 48.1 bits (113), Expect = 0.013, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 98 VAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF 139
+A++ + +FGSY LGVH +G+DID L V P +VDR D+F
Sbjct: 1 MADQATALVLSFGSYHLGVHSRGSDIDVLVVGPSYVDR-DFF 41
>gi|55296010|dbj|BAD68901.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55296026|dbj|BAD69437.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 207
Score = 48.1 bits (113), Expect = 0.016, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 98 VAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF 139
+A++ + +FGSY LGVH +G+DID L V P +VDR D+F
Sbjct: 1 MADQATALVLSFGSYHLGVHSRGSDIDVLVVGPSYVDR-DFF 41
>gi|47496915|dbj|BAD19964.1| hypothetical protein [Oryza sativa Japonica Group]
gi|47497725|dbj|BAD19790.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 266
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 200 KNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIK 237
+ LD RSLNG RV DEILRLVP+ + F LR +K
Sbjct: 56 RGLDLATARSLNGVRVADEILRLVPDADVFHTTLRCVK 93
>gi|428181303|gb|EKX50167.1| hypothetical protein GUITHDRAFT_103980 [Guillardia theta CCMP2712]
Length = 760
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 37/199 (18%)
Query: 82 KEWIKEVSIAKNIPPTVAEKVG-GKIYTFGSYRLGVHHKGADIDALCVAP---------- 130
+E +++VS+ ++ +A + FGS + KG+D+D + P
Sbjct: 403 EEMVRKVSVCTSVSKIIAGSYQRSSVQMFGSSGSNLCSKGSDVDICLLIPEEEIQRNAKG 462
Query: 131 -RHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNF-DGIEIDMLFARLALKEIP 188
R R YF KL T + ++ + A VP+IK DG++
Sbjct: 463 QRKTARFRYFLIGLAKLLTRQGMMNVEPLPNARVPIIKFQARDGLDFSF----------- 511
Query: 189 DDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSN 248
D DL CV ++ C T+ + R + IK W K+ I++
Sbjct: 512 -DCDL------------CVNNVLACINTNLLFTYTMLDARVRPLIMCIKHWVKQRQIHNA 558
Query: 249 VLGYLGGVSWAMLVARICQ 267
GYL +++++V + Q
Sbjct: 559 FRGYLSSYTYSLMVIQYLQ 577
>gi|413933521|gb|AFW68072.1| hypothetical protein ZEAMMB73_464170 [Zea mays]
Length = 763
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 51 LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFG 110
L++ LK V + E+ + R +V+ +L +V W V+ +++P +A + T+
Sbjct: 212 LSKFLKDEGVVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQGLAT---ATVLTYD 268
Query: 111 SYRLGVHHKGADIDALCVAP 130
SY LG H ++ID LC+ P
Sbjct: 269 SYTLGAHGPESNIDLLCLGP 288
>gi|413933520|gb|AFW68071.1| hypothetical protein ZEAMMB73_464170 [Zea mays]
Length = 546
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 51 LAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFG 110
L++ LK V + E+ + R +V+ +L +V W V+ +++P +A + T+
Sbjct: 212 LSKFLKDEGVVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQGLAT---ATVLTYD 268
Query: 111 SYRLGVHHKGADIDALCVAP 130
SY LG H ++ID LC+ P
Sbjct: 269 SYTLGAHGPESNIDLLCLGP 288
>gi|62733224|gb|AAX95341.1| hypothetical protein [Oryza sativa Japonica Group]
gi|77552690|gb|ABA95487.1| expressed protein [Oryza sativa Japonica Group]
Length = 347
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIK 237
VRSLNG RV DEILRLVP+ F LR +K
Sbjct: 159 VRSLNGVRVADEILRLVPDAATFHTTLRCVK 189
>gi|345493930|ref|XP_003427182.1| PREDICTED: hypothetical protein LOC100678425 [Nasonia vitripennis]
Length = 177
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
Query: 511 IEVRHVKKKQLSEYLPAHMLKKDKKT-KSGDQNTSAKKRKSDQALDELGDKSRPRLDSDS 569
IE ++V+KK LS Y+PA+ +K+++KT S +QN KKR SD++++ +K R DS++
Sbjct: 100 IEAKYVRKKDLSNYIPANQIKRERKTSSSSEQN--EKKRSSDESMNS-NNKKRKVEDSET 156
>gi|170061477|ref|XP_001866249.1| poly a polymerase [Culex quinquefasciatus]
gi|167879713|gb|EDS43096.1| poly a polymerase [Culex quinquefasciatus]
Length = 59
Score = 43.5 bits (101), Expect = 0.35, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 27/31 (87%)
Query: 506 KDGMKIEVRHVKKKQLSEYLPAHMLKKDKKT 536
+DGMKIE RHV++KQL++YL ++LK+++ +
Sbjct: 13 RDGMKIEARHVRRKQLNQYLDPNLLKRERNS 43
>gi|224143336|ref|XP_002336029.1| predicted protein [Populus trichocarpa]
gi|222838985|gb|EEE77336.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 355 TISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHL 410
T +++I K W LFE FF Y++YL + + A D L W G +ES++R L
Sbjct: 27 TTTKEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQL 82
>gi|46805211|dbj|BAD17691.1| unknown protein [Oryza sativa Japonica Group]
Length = 285
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIK 237
VRSLNG RV DEILRLVP+ F LR +K
Sbjct: 33 VRSLNGVRVADEILRLVPDAAAFHTTLRCVK 63
>gi|297725915|ref|NP_001175321.1| Os07g0658500 [Oryza sativa Japonica Group]
gi|255678036|dbj|BAH94049.1| Os07g0658500 [Oryza sativa Japonica Group]
Length = 319
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIK 237
VR+LNG RV DEILRLVP+ F LR +K
Sbjct: 136 VRNLNGVRVADEILRLVPDAAAFHTTLRCVK 166
>gi|366988339|ref|XP_003673936.1| hypothetical protein NCAS_0A09970 [Naumovozyma castellii CBS 4309]
gi|342299799|emb|CCC67555.1| hypothetical protein NCAS_0A09970 [Naumovozyma castellii CBS 4309]
Length = 683
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 90/240 (37%), Gaps = 56/240 (23%)
Query: 60 VSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHK 119
+S + +E+ +R L++L V E K+ S+ + FGSY ++
Sbjct: 209 ISPSKDEIHTRNRTLARLRKAVSEQWKDASL----------------HVFGSYATDLYLP 252
Query: 120 GADIDALCVAP-RHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKM--NFDGIEID 176
G+DID ++ R DR + LK T L + +A VP+IK I ID
Sbjct: 253 GSDIDCAVISRNRDKDRRQCLYDLAKSLKQKGLATHLEVIAKARVPIIKFVEPRSKIHID 312
Query: 177 MLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTI 236
+ F + E ++ E ++ P + L L+
Sbjct: 313 VSFEKTNGAE-------------------------AAKLIREWIKDTPGLRELVLVLKQF 347
Query: 237 KLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAA---------STLVCKFFLVFSQ 287
L KK + V G LGG S LV +++P A L+ +FF ++ +
Sbjct: 348 -LAVKK--LNEVVNGGLGGFSIICLVYAFLRMHPRIKAGEIDPMKNLGVLLIEFFELYGK 404
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 14/85 (16%)
Query: 167 KMNFDG-IEIDMLFARLA---LKEIPD----------DMDLRDDMLLKNLDQKCVRSLNG 212
KM F+G E+ +FAR A K + D+D+ +++ V SLNG
Sbjct: 642 KMKFEGKFEVSNVFARWAEMMKKRVKRRDPVKSDRQWDLDIAQGSDTTECNEQTVDSLNG 701
Query: 213 CRVTDEILRLVPNIENFRLALRTIK 237
CRVTD+ L LVPNI + + ++
Sbjct: 702 CRVTDQFLHLVPNISSLGYIMNGVR 726
>gi|410730487|ref|XP_003671423.2| hypothetical protein NDAI_0G04030 [Naumovozyma dairenensis CBS 421]
gi|401780241|emb|CCD26180.2| hypothetical protein NDAI_0G04030 [Naumovozyma dairenensis CBS 421]
Length = 582
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 62/341 (18%), Positives = 132/341 (38%), Gaps = 80/341 (23%)
Query: 3 FTQHSNSMQTSKPHQDGKPQ-SQAPVTYGMTTALNLSPPNQL-----------DLQRTRE 50
F SNS + K Q ++ P++ G++++++ + +L D + +E
Sbjct: 105 FIALSNSSSDEEATDKVKAQPTKKPISDGVSSSVDTTHTAKLLTTDYPWIINHDHSKQKE 164
Query: 51 LAECLK-------PYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVG 103
+A+ L Y +S + EE+ R + + ++ + V + + ++
Sbjct: 165 IADWLTMEIRDFVSY-ISPSKEEIKERNDTIGRIRDAVNHFWNDANL------------- 210
Query: 104 GKIYTFGSYRLGVHHKGADIDALCVAPR-HVDRADYFSSFFEKLKTVDEVTDLRAVEEAF 162
+ FGSY ++ G+DID + ++ + D + LK TD+ + +A
Sbjct: 211 ---HVFGSYATDLYLPGSDIDCVIISEKGDKDSRSSLYALANFLKKRGLATDIEVIAKAR 267
Query: 163 VPVIKM--NFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEIL 220
VP+IK I ID+ F R + L ++ E L
Sbjct: 268 VPIIKFIDPRSKIHIDVSFER-------------------------INGLEAAKLIREWL 302
Query: 221 RLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAAS----- 275
P + L ++ + + +++ G LGG S LV Q++P ++
Sbjct: 303 NDTPGLREITLIVKQFLHARRLNNVHT---GGLGGFSIICLVFSFLQMHPRIISNEIDPM 359
Query: 276 ----TLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPR 312
L+ +FF ++ + + + + G+P++ P+
Sbjct: 360 ENLGVLLVEFFELYGKNFGYDDIAITTAN----GYPIYLPK 396
>gi|401623740|gb|EJS41828.1| trf4p [Saccharomyces arboricola H-6]
Length = 573
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 84/221 (38%), Gaps = 48/221 (21%)
Query: 106 IYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFF---EKLKTVDEVTDLRAVEEAF 162
++ FGSY ++ G+DID CV + + ++ F LK + T++ V +A
Sbjct: 212 LHVFGSYSTDLYLPGSDID--CVITSELGGKESRNNLFSLASHLKKKNLATEIEVVAKAR 269
Query: 163 VPVIKM--NFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEIL 220
VP+IK GI ID+ F R L ++ E L
Sbjct: 270 VPIIKFVEPNSGIHIDVSFER-------------------------TNGLEAAKLIREWL 304
Query: 221 RLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAA------ 274
P + L ++ + + +++ G LGG S LV ++P
Sbjct: 305 NDTPGLRELVLIVKQFLHSRRLNNVHT---GGLGGFSIICLVFSFLHMHPRIITKEIEAK 361
Query: 275 ---STLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPR 312
L+ +FF ++ + V L D G+PV+ P+
Sbjct: 362 DNLGVLLIEFFELYGKNFGYDDVALGSSD----GYPVYFPK 398
>gi|46806537|dbj|BAD17650.1| unknown protein [Oryza sativa Japonica Group]
gi|125581350|gb|EAZ22281.1| hypothetical protein OsJ_05937 [Oryza sativa Japonica Group]
Length = 169
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIK 237
VRSLNG RV D+ILRLVP+ F LR +K
Sbjct: 43 VRSLNGVRVADKILRLVPDAAAFHTTLRCVK 73
>gi|170059282|ref|XP_001865295.1| poly a polymerase [Culex quinquefasciatus]
gi|167878123|gb|EDS41506.1| poly a polymerase [Culex quinquefasciatus]
Length = 98
Score = 41.6 bits (96), Expect = 1.4, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 12/64 (18%)
Query: 477 AANVILNLTYDIQHFTNAVHWQATQSKMMK---DGMKIEVRHVKKKQLSEYLPAHMLKKD 533
+ N+ ++LT IQ+FT+AVH A K+++ DGMK E RHV++ ++LK++
Sbjct: 6 SENLNVDLTEIIQNFTDAVHKHAVHIKVLETTCDGMKTEARHVRR---------NLLKRE 56
Query: 534 KKTK 537
+K +
Sbjct: 57 RKNQ 60
>gi|83774636|dbj|BAE64759.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 720
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 43 LDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKV 102
L+L L LK Y ++EE++ R E L+KE + N+P +
Sbjct: 581 LNLGGIDGLKGWLKGYLAFPSNEEITQRQEAF----ELIKELVNRRD--ANLPAGTRLDL 634
Query: 103 GGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK--TVDEVTDLRAVEE 160
++ GSY GV + +D+D L + V +F+ KL+ T +V LR V+
Sbjct: 635 LFEVVPVGSYGFGVWNSSSDMDILVIG--QVSPRTFFALMIAKLRRATDSDVVLLRKVKA 692
Query: 161 AFVPVIKMNFDGIEIDMLF 179
A ++++ G+ +D+ +
Sbjct: 693 ASGIMLELEVRGVRVDLQY 711
>gi|403223254|dbj|BAM41385.1| uncharacterized protein TOT_030000647 [Theileria orientalis strain
Shintoku]
Length = 523
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 74 LSKLNNLV-----KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCV 128
L KLN+ + +++ K+ ++ ++ P + GK+YTFGS G+ +G+DID LC+
Sbjct: 164 LRKLNDEILNPTPEQYQKKQNLIDHLTPIFKSTIDGKLYTFGSCDNGLWSRGSDID-LCL 222
Query: 129 APRHVDRADYFSSFFEKLKTV---DEVTDLRAVEEAFVPVIKM 168
+ D Y S +K+ ++ ++ A VP++K+
Sbjct: 223 VVPNCDSKRYMLSKLNLIKSCLSNSDIISKISIISARVPIVKL 265
>gi|410075647|ref|XP_003955406.1| hypothetical protein KAFR_0A08370 [Kazachstania africana CBS 2517]
gi|372461988|emb|CCF56271.1| hypothetical protein KAFR_0A08370 [Kazachstania africana CBS 2517]
Length = 630
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 96/255 (37%), Gaps = 59/255 (23%)
Query: 29 YGMTTALNLSPPNQL--DLQRTRELAECL----KPY--NVSETDEELSSRMEVLSKLNNL 80
YG +LN P L D + R++ E L K + +S + EE+ R + +SKL
Sbjct: 141 YGNERSLNNDYPWLLNHDHSKQRDIIEWLTLEIKDFVAYISPSREEIKLRNKAVSKLGRA 200
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCV---APRHVDRAD 137
+KE + ++ FGSY ++ G+DID CV A + +
Sbjct: 201 IKELWSD----------------SELLVFGSYATDLYLPGSDID--CVVNSASGNKEHRS 242
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKM--NFDGIEIDMLFARLALKEIPDDMDLRD 195
Y LK + T + + A VP+IK G+ ID+ F R
Sbjct: 243 YLYELARFLKKKNLATSIEVIARARVPIIKFIEPESGVHIDISFER-------------- 288
Query: 196 DMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGG 255
+ ++ E L + P + L ++ + + +++ G LGG
Sbjct: 289 -----------TNGVEAAKLIREWLDMTPGLRELVLIVKQFLTARRLNDVHT---GGLGG 334
Query: 256 VSWAMLVARICQLYP 270
S LV L+P
Sbjct: 335 FSIICLVYSFLHLHP 349
>gi|218186213|gb|EEC68640.1| hypothetical protein OsI_37050 [Oryza sativa Indica Group]
Length = 248
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 21/31 (67%)
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIK 237
VRSLNG RV DEIL LVP+ F LR +K
Sbjct: 112 VRSLNGVRVADEILWLVPDAAAFHTTLRCVK 142
>gi|308504954|ref|XP_003114660.1| hypothetical protein CRE_28636 [Caenorhabditis remanei]
gi|308258842|gb|EFP02795.1| hypothetical protein CRE_28636 [Caenorhabditis remanei]
Length = 398
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 21/131 (16%)
Query: 62 ETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGA 121
+TD E + ++++L ++ + + IK+V K I + E + FGS G+ KG
Sbjct: 51 QTDGEFAKKLQILKEIEDYL---IKQV-FNKRINERLYEIKA--VVPFGSSNSGLGMKGG 104
Query: 122 DID-ALCVAP--RHVDRA-------DYFSSFFEKLKTVD-----EVTDLRAVEEAFVPVI 166
D+D +CV P R D D + EK+K+ + DL E+A VP++
Sbjct: 105 DLDLIICVYPPLRQGDEVEMKRRTNDILTVIHEKIKSKEMLRNRRFEDLEHREKARVPIV 164
Query: 167 KMNFDGIEIDM 177
DGI++D+
Sbjct: 165 TGKVDGIDLDI 175
>gi|428671662|gb|EKX72580.1| conserved hypothetical protein [Babesia equi]
Length = 556
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 93 NIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFF---EKLKTV 149
N+ P + VGG ++TFGS G+ +G+DID V P + + S L
Sbjct: 241 NLKPLLERSVGGTMHTFGSCSNGLWVRGSDIDFCLVIPDCKTKRQWLSKLMLVKSSLLNT 300
Query: 150 DEVTDLRAVEEAFVPVIKMNFD 171
D ++ ++ + +A VP+ K+ FD
Sbjct: 301 DYISKIQII-QARVPIAKL-FD 320
>gi|262372533|ref|ZP_06065812.1| predicted protein [Acinetobacter junii SH205]
gi|262312558|gb|EEY93643.1| predicted protein [Acinetobacter junii SH205]
Length = 523
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 13/130 (10%)
Query: 462 VSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQL 521
V G+ ++ +GL + N YD+ H + + QA ++++ K +++ +K++Q
Sbjct: 205 VEGIFNLNHLGLHYYGGN------YDLYHRQHQLQIQALSHSVLQE--KRDLKQLKEQQH 256
Query: 522 SEYLPAHMLKK--DKKTKSGDQNT---SAKKRKSDQALDELGDKSRPRLDSDSNSLSDKV 576
+ A KK +K SG Q T AKK +S+Q+L +L + +L + L K
Sbjct: 257 QSQMKAQKRKKTGEKLRASGSQATILLDAKKEQSEQSLSQLKKQQIKQLTQAKDELQHKQ 316
Query: 577 NNISNNGDQS 586
+ + QS
Sbjct: 317 HQLEYYKSQS 326
>gi|297820390|ref|XP_002878078.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323916|gb|EFH54337.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 602
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 98/252 (38%), Gaps = 55/252 (21%)
Query: 46 QRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGK 105
+R E+ ++P VS+ SR E++ + L+K G +
Sbjct: 45 ERAHEILCTIQPALVSD-----KSRNEIIDYVRTLIKS-----------------HDGIE 82
Query: 106 IYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVP- 164
+++FGS L + DID + +++D D++ +L+ + ++ A + F+P
Sbjct: 83 VFSFGSVPLKTYLPDGDIDLTVLTKQNMD-DDFYGQLCSRLQNEERESEFHATDVQFIPA 141
Query: 165 ---VIKMNFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILR 221
VIK N I +D+ F + A L L+ +DQ R D +
Sbjct: 142 QVKVIKCNIRNIAVDISFNQTA--------GLCALCFLEQVDQLFGR--------DHL-- 183
Query: 222 LVPNIENFRLALRTIKLWAKKHG-IYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVC- 279
F+ ++ +K W I G + + A+LV I L+ ++ + L
Sbjct: 184 -------FKRSIILVKAWCYYESRILGANTGLISTYALAVLVLYIINLFHSSLSGPLAVL 236
Query: 280 -KFFLVFSQWKW 290
KF + + W
Sbjct: 237 YKFLDYYGSFDW 248
>gi|218190338|gb|EEC72765.1| hypothetical protein OsI_06415 [Oryza sativa Indica Group]
Length = 608
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 20/31 (64%)
Query: 207 VRSLNGCRVTDEILRLVPNIENFRLALRTIK 237
VRSLNG V DEILRLVP+ LR +K
Sbjct: 152 VRSLNGVHVADEILRLVPDAAALHTTLRCVK 182
>gi|15898303|ref|NP_342908.1| hypothetical protein SSO1471 [Sulfolobus solfataricus P2]
gi|284176026|ref|ZP_06389995.1| hypothetical protein Ssol98_15405 [Sulfolobus solfataricus 98/2]
gi|384434734|ref|YP_005644092.1| DNA polymerase beta domain-containing protein region [Sulfolobus
solfataricus 98/2]
gi|13814700|gb|AAK41698.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261602888|gb|ACX92491.1| DNA polymerase beta domain protein region [Sulfolobus solfataricus
98/2]
Length = 155
Score = 38.9 bits (89), Expect = 8.5, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 106 IYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPV 165
I FGSY G K +DID L V + DR + F FFE K +D ++ + P
Sbjct: 20 IVLFGSYARGDQRKDSDIDLLIVLDKIEDRYEVFKKFFEVEKILDLTVYKELRQKGYNPY 79
Query: 166 IKMNFDGIEIDMLFARLALKEIPDDMDLRD-DMLLKNLDQKCVRSL 210
+ F +E F L + + D L D + ++KN ++ + L
Sbjct: 80 VSPIFLDVEKATKFRPLYIDIVFDAKILYDKNDVMKNTFERVRKRL 125
>gi|255710469|ref|XP_002551518.1| KLTH0A01276p [Lachancea thermotolerans]
gi|238932895|emb|CAR21076.1| KLTH0A01276p [Lachancea thermotolerans CBS 6340]
Length = 609
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 96/247 (38%), Gaps = 61/247 (24%)
Query: 44 DLQRTRELAECL----KPY--NVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPT 97
D + RE+A+ L K + +S + EE+ R +SK+ N VK+ +
Sbjct: 158 DHSKQREIADWLTLEIKDFVAYISPSQEEIRVRNSTISKIRNAVKDLWPDAD-------- 209
Query: 98 VAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADY-----FSSFFEKLKTVDEV 152
++ FGS+ ++ G+DID + + D+ + +SF ++ K
Sbjct: 210 --------LHVFGSFATDLYLPGSDIDCV-INSSSGDKENRNCLYSLASFLKRRKL---A 257
Query: 153 TDLRAVEEAFVPVIKM--NFDGIEIDMLFARLALKEIPDDMDLRDDMLLKNLDQKCVRSL 210
T + + +A VP+IK I ID+ F R V L
Sbjct: 258 TQVEVISKARVPIIKFVEPISQIHIDISFER-------------------------VNGL 292
Query: 211 NGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYP 270
RV L+ P + L ++ + + +++ G LGG S LV QL+P
Sbjct: 293 EAARVIRGWLKETPGLRELVLIVKQFLAARRLNMVHT---GGLGGFSIICLVYAFLQLHP 349
Query: 271 NAAASTL 277
+S +
Sbjct: 350 RVISSDI 356
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,473,349,183
Number of Sequences: 23463169
Number of extensions: 451696479
Number of successful extensions: 1567306
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 256
Number of HSP's that attempted gapping in prelim test: 1547686
Number of HSP's gapped (non-prelim): 17363
length of query: 654
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 505
effective length of database: 8,863,183,186
effective search space: 4475907508930
effective search space used: 4475907508930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)