Your job contains 1 sequence.
>psy18158
MTFTQHSNSMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNV
SETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKG
ADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFA
RLALKEIPDDMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWA
KKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPD
NVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDI
YNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHI
NLAHVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANV
ILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGD
QNTSAKKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLSQVY
GLNDSVADSIDNSLDDLSSTSPHPTPPVKVLSDCFNYLLLLKFSLKLVFYVGPF
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy18158
(654 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015949 - symbol:hrg "hiiragi" species:7227 "Droso... 1728 5.7e-178 1
ZFIN|ZDB-GENE-040426-1256 - symbol:papolg "poly(A) polyme... 1458 7.0e-169 2
UNIPROTKB|F1NKG9 - symbol:PAPOLA "Uncharacterized protein... 1468 6.3e-168 2
UNIPROTKB|Q9BWT3 - symbol:PAPOLG "Poly(A) polymerase gamm... 1434 6.3e-168 2
MGI|MGI:2442119 - symbol:Papolg "poly(A) polymerase gamma... 1431 8.0e-168 2
RGD|1310337 - symbol:Papolg "poly(A) polymerase gamma" sp... 1432 2.1e-167 2
UNIPROTKB|P51003 - symbol:PAPOLA "Poly(A) polymerase alph... 1464 4.4e-167 2
MGI|MGI:109301 - symbol:Papola "poly (A) polymerase alpha... 1464 4.4e-167 2
UNIPROTKB|G3XAH6 - symbol:PAPOLA "Poly(A) polymerase alph... 1464 4.4e-167 2
UNIPROTKB|P25500 - symbol:PAPOLA "Poly(A) polymerase alph... 1465 9.1e-167 2
UNIPROTKB|G3MYA2 - symbol:PAPOLA "Poly(A) polymerase alph... 1465 9.1e-167 2
UNIPROTKB|Q3T0A2 - symbol:PAPOLA "Poly(A) polymerase alph... 1465 9.1e-167 2
UNIPROTKB|A5D7N5 - symbol:PAPOLG "Uncharacterized protein... 1435 9.1e-167 2
UNIPROTKB|F1SAQ7 - symbol:PAPOLA "Uncharacterized protein... 1464 1.2e-166 2
UNIPROTKB|I3L6F0 - symbol:PAPOLA "Uncharacterized protein... 1464 1.2e-166 2
UNIPROTKB|F1SQL7 - symbol:PAPOLG "Uncharacterized protein... 1435 1.5e-166 2
UNIPROTKB|F1PDS0 - symbol:PAPOLA "Uncharacterized protein... 1464 2.4e-166 2
UNIPROTKB|J9NS30 - symbol:PAPOLG "Uncharacterized protein... 1427 3.9e-166 2
ZFIN|ZDB-GENE-030131-3507 - symbol:papola "poly(A) polyme... 1451 1.1e-163 2
UNIPROTKB|Q9NRJ5 - symbol:PAPOLB "Poly(A) polymerase beta... 1429 1.2e-160 2
UNIPROTKB|I3LRR6 - symbol:PAPOLB "Uncharacterized protein... 1429 8.6e-160 2
RGD|1310946 - symbol:Papolb "poly (A) polymerase beta (te... 1431 4.7e-159 2
MGI|MGI:1932115 - symbol:Papolb "poly (A) polymerase beta... 1427 1.3e-158 2
UNIPROTKB|F1NL95 - symbol:F1NL95 "Uncharacterized protein... 1396 1.7e-150 2
UNIPROTKB|F1P3A1 - symbol:F1P3A1 "Uncharacterized protein... 1396 3.6e-150 2
RGD|1308673 - symbol:Papola "poly (A) polymerase alpha" s... 1052 1.5e-136 3
UNIPROTKB|F1NDP1 - symbol:PAPOLA "Uncharacterized protein... 1132 2.0e-132 2
UNIPROTKB|D4A764 - symbol:Papola "Protein Papola" species... 941 7.3e-125 3
WB|WBGene00009658 - symbol:F43G6.5 species:6239 "Caenorha... 1054 1.1e-116 2
DICTYBASE|DDB_G0288259 - symbol:papA "poly(A) polymerase"... 1023 8.9e-113 2
WB|WBGene00012528 - symbol:pap-1 species:6239 "Caenorhabd... 1106 4.6e-112 1
UNIPROTKB|Q9U2P3 - symbol:pap-1 "Protein PAP-1" species:6... 1106 4.6e-112 1
WB|WBGene00011791 - symbol:T15H9.6 species:6239 "Caenorha... 1001 5.0e-108 2
UNIPROTKB|Q09995 - symbol:T15H9.6 "Protein T15H9.6" speci... 1001 5.0e-108 2
TAIR|locus:2134113 - symbol:nPAP "nuclear poly(a) polymer... 986 1.4e-103 2
TAIR|locus:2043560 - symbol:PAPS2 "poly(A) polymerase 2" ... 979 1.4e-103 2
TAIR|locus:2030943 - symbol:PAPS1 "poly(A) polymerase 1" ... 986 2.2e-103 2
POMBASE|SPBC646.04 - symbol:pla1 "poly(A) polymerase Pla1... 936 4.8e-94 1
SGD|S000001710 - symbol:PAP1 "Poly(A) polymerase, one of ... 892 1.0e-92 2
CGD|CAL0002451 - symbol:PAP1 species:5476 "Candida albica... 900 3.1e-90 1
UNIPROTKB|Q9UW26 - symbol:PAPA "Poly(A) polymerase PAPa" ... 900 3.1e-90 1
UNIPROTKB|F8WAT4 - symbol:PAPOLG "Poly(A) polymerase gamm... 850 6.2e-85 1
UNIPROTKB|G3V2A0 - symbol:PAPOLA "Poly(A) polymerase alph... 650 4.0e-81 2
GENEDB_PFALCIPARUM|PFF1240w - symbol:PFF1240w "poly(A) po... 777 3.4e-77 1
UNIPROTKB|C6KT92 - symbol:PFF1240w "Poly(A) polymerase PA... 777 3.4e-77 1
UNIPROTKB|H0YJ00 - symbol:PAPOLA "Poly(A) polymerase alph... 739 3.6e-73 1
TAIR|locus:2084274 - symbol:PAPS3 "poly(A) polymerase 3" ... 517 1.2e-49 1
UNIPROTKB|H7C3W0 - symbol:PAPOLG "Poly(A) polymerase gamm... 503 3.7e-48 1
UNIPROTKB|Q59G05 - symbol:PAPOLG "Poly(A) polymerase gamm... 297 2.3e-46 2
UNIPROTKB|G3V3I9 - symbol:PAPOLA "Poly(A) polymerase alph... 479 1.3e-45 1
UNIPROTKB|F1PYB9 - symbol:PAPOLG "Uncharacterized protein... 297 2.5e-45 2
UNIPROTKB|F1NDP2 - symbol:PAPOLA "Uncharacterized protein... 289 1.1e-24 1
UNIPROTKB|G3V457 - symbol:PAPOLA "Poly(A) polymerase alph... 289 1.1e-24 1
UNIPROTKB|G4N5I8 - symbol:MGG_06121 "Uncharacterized prot... 219 6.0e-13 2
>FB|FBgn0015949 [details] [associations]
symbol:hrg "hiiragi" species:7227 "Drosophila melanogaster"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA;NAS] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HSSP:P25500 EMBL:AY113434 ProteinModelPortal:Q8MZ09
SMR:Q8MZ09 STRING:Q8MZ09 PaxDb:Q8MZ09 PRIDE:Q8MZ09
FlyBase:FBgn0015949 InParanoid:Q8MZ09 OrthoDB:EOG42547T ChiTaRS:HRG
ArrayExpress:Q8MZ09 Bgee:Q8MZ09 Uniprot:Q8MZ09
Length = 659
Score = 1728 (613.3 bits), Expect = 5.7e-178, P = 5.7e-178
Identities = 344/600 (57%), Positives = 428/600 (71%)
Query: 8 NSMQTSKPHQ--DGKPQSQAPVT--YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSET 63
NS T + H +G S P GMT+A++L+ P DLQRT EL L+PYNV E+
Sbjct: 3 NSEPTHRQHHQHNGNSTSGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFES 62
Query: 64 DEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADI 123
+EL+ RME+L+KLN LVK+W+KE+S++KN+P + AEK+GGKIYTFGSYRLGVHHKGADI
Sbjct: 63 QDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADI 122
Query: 124 DALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
DALCVAPR+++R DYF SFFE LK EVT+ R+VEEAFVPVIKMNFDGIEID+LFARL+
Sbjct: 123 DALCVAPRNIERTDYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLS 182
Query: 184 LKEIPXXXXXXXXXXXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
LKEIP + VRSLNGCRVTDEIL LVPNIENFRLALRTIKLWAKKH
Sbjct: 183 LKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKH 242
Query: 244 GIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN 303
GIYSN LGY GGV+WAMLVAR CQLYPNAAA+TLV KFFLVFS+WKWP PVLLK PDNVN
Sbjct: 243 GIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVN 302
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG 363
L F VWDPRVN +DRYHLMPIITPAYPQQNSTFNVS ST+ ++ EF +G I+++I G
Sbjct: 303 LRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLG 362
Query: 364 KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLA 423
+ W++LFE P+FF +YRH++VL+ +S +A+D LEWCGL+ESKVR LI NLERNPHI LA
Sbjct: 363 RIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLISNLERNPHIALA 422
Query: 424 HVNPECYTDTTGVIANGSGSPEITAEGKEEGGENTSPPVSG-VASMWFIGLDFIAA-NVI 481
HVNP+C+ G AN S + + ++ N S S SMWFIGL+F + N+
Sbjct: 423 HVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 482
Query: 482 LNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQ 541
++LT IQ+FT V KM+K+GM I+ RHVK+KQLS YL + LK+++K+
Sbjct: 483 VDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKSMESHN 542
Query: 542 N-----TSAKKRKSD---QALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTED 593
N + +KR S Q+ D L +P + K+ +S++ + +S + D
Sbjct: 543 NFNNTLLANRKRLSTELAQSQDPLPPGQQPSSGNRGRDSGAKIQRLSDSLTEENSNASSD 602
>ZFIN|ZDB-GENE-040426-1256 [details] [associations]
symbol:papolg "poly(A) polymerase gamma"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
ZFIN:ZDB-GENE-040426-1256 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:64895 EMBL:BC056818
IPI:IPI00492667 RefSeq:NP_956915.1 UniGene:Dr.79169
ProteinModelPortal:Q6PGV5 SMR:Q6PGV5 STRING:Q6PGV5 PRIDE:Q6PGV5
GeneID:393593 KEGG:dre:393593 InParanoid:Q6PGV5 NextBio:20814613
ArrayExpress:Q6PGV5 Bgee:Q6PGV5 Uniprot:Q6PGV5
Length = 744
Score = 1458 (518.3 bits), Expect = 7.0e-169, Sum P(2) = 7.0e-169
Identities = 269/402 (66%), Positives = 325/402 (80%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T++++L+ P ++D T++L E +KP+ V E ++EL+ R+ VL KLN+ VKEWI E+
Sbjct: 21 YGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFVKEWISEI 80
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+ VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R D+FSSFFEKLK
Sbjct: 81 SESKNLPPSAVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERTDFFSSFFEKLKR 140
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVR 208
DE+ DLRAVE+AFVPVIK FDGIEID+LFARLAL+ IP +C+R
Sbjct: 141 HDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIR 200
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN ENFRL LR IKLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 201 SLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 260
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 261 YPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRTIM EEFK G T++++I GK W KLFE PNFF +YRHY+VL A
Sbjct: 321 YPQQNSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKADWSKLFEPPNFFQQYRHYIVLTA 380
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
S+ + E+ LEW GL+ESK+R L+GNLERN +I LAHVNP+ +
Sbjct: 381 SASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSF 422
Score = 206 (77.6 bits), Expect = 7.0e-169, Sum P(2) = 7.0e-169
Identities = 63/161 (39%), Positives = 85/161 (52%)
Query: 443 SPEITAEGKEEGGENTSPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQ 498
+P+ KE EN SMWFIG+ F + V ++LTYDIQ FT+ V+ Q
Sbjct: 418 NPQSFPGSKENRNEND------FVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQ 471
Query: 499 ATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQ-ALDEL 557
A+ M+KDGM IE HVKKKQL YLP ++++ KK+ GD N S+ S + +LD
Sbjct: 472 ASNINMLKDGMTIEATHVKKKQLHHYLPPELVQRKKKSL-GDINRSSNGGGSKRCSLDSS 530
Query: 558 G-DKSRPRLDSDSNSLSDKVNNISNNGDQSSSECTEDNSLS 597
D SR D+D + IS +S+ EDNS S
Sbjct: 531 QLDSSR---DTDIGTPFSSPTPISKPCQPASTP--EDNSSS 566
>UNIPROTKB|F1NKG9 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006378 "mRNA polyadenylation" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:AADN02003685
IPI:IPI00820771 RefSeq:NP_001185530.1 UniGene:Gga.4316
Ensembl:ENSGALT00000037556 GeneID:395878 KEGG:gga:395878
NextBio:20815945 ArrayExpress:F1NKG9 Uniprot:F1NKG9
Length = 737
Score = 1468 (521.8 bits), Expect = 6.3e-168, Sum P(2) = 6.3e-168
Identities = 272/412 (66%), Positives = 328/412 (79%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G Q YG+T+ ++L+ P + D T++L E LKPY V E +EEL R+ +L KLN
Sbjct: 9 GSQTQQLQKHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLN 68
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADY 138
NLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+
Sbjct: 69 NLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDF 128
Query: 139 FSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXX 198
F+SF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 129 FTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSL 188
Query: 199 XXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSW 258
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVSW
Sbjct: 189 LKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSW 248
Query: 259 AMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADR 318
AMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DR
Sbjct: 249 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 308
Query: 319 YHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFT 378
YHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 YHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQ 368
Query: 379 KYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+GNLE+N I LAHVNP+ +
Sbjct: 369 KYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF 420
Score = 187 (70.9 bits), Expect = 6.3e-168, Sum P(2) = 6.3e-168
Identities = 50/135 (37%), Positives = 73/135 (54%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
+P +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI R
Sbjct: 426 NPDKEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAR 485
Query: 515 HVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLS 573
HVK+KQL + LP H+L+K KK + G + T+ D ++D S P S ++++
Sbjct: 486 HVKRKQLHQLLPNHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSTSVP---SPTSAMK 542
Query: 574 DKVNNISNNGDQSSS 588
N S + SS
Sbjct: 543 TSPLNSSGSSQGRSS 557
>UNIPROTKB|Q9BWT3 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634 EMBL:CH471053
GO:GO:0046872 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
EMBL:AY029162 EMBL:AF312211 EMBL:AJ308101 EMBL:AK021867
EMBL:AK023544 EMBL:AK314663 EMBL:BC111701 EMBL:BC113747
IPI:IPI00304442 RefSeq:NP_075045.2 UniGene:Hs.387471
ProteinModelPortal:Q9BWT3 SMR:Q9BWT3 STRING:Q9BWT3
PhosphoSite:Q9BWT3 DMDM:116242699 PaxDb:Q9BWT3 PRIDE:Q9BWT3
Ensembl:ENST00000238714 GeneID:64895 KEGG:hsa:64895 UCSC:uc002sai.3
CTD:64895 GeneCards:GC02P060983 HGNC:HGNC:14982 HPA:CAB017795
neXtProt:NX_Q9BWT3 PharmGKB:PA32934 InParanoid:Q9BWT3 OMA:IDGSSKR
OrthoDB:EOG4R23T8 PhylomeDB:Q9BWT3 GenomeRNAi:64895 NextBio:67037
ArrayExpress:Q9BWT3 Bgee:Q9BWT3 CleanEx:HS_PAPOLG
Genevestigator:Q9BWT3 GermOnline:ENSG00000115421 Uniprot:Q9BWT3
Length = 736
Score = 1434 (509.9 bits), Expect = 6.3e-168, Sum P(2) = 6.3e-168
Identities = 265/402 (65%), Positives = 322/402 (80%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
Score = 221 (82.9 bits), Expect = 6.3e-168, Sum P(2) = 6.3e-168
Identities = 59/135 (43%), Positives = 80/135 (59%)
Query: 467 SMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLS 522
SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M+K+GMKIE HVKKKQL
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLH 493
Query: 523 EYLPAHMLKKDKKTKSGDQNTSAKKRKSDQ-ALDELG-DKSRPRLDSDSNSLSDKVNNIS 580
YLPA +L+K KK D N S+ +S + +LD D SR D+D+ + N+ +
Sbjct: 494 HYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSR---DTDNGT---PFNSPA 547
Query: 581 NNGDQSSSECTEDNS 595
+ D S TE NS
Sbjct: 548 SKSDSPSVGETERNS 562
>MGI|MGI:2442119 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:2442119 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DQ103505 EMBL:AK035810 EMBL:AL662810 EMBL:BC059271
IPI:IPI00317437 RefSeq:NP_766143.2 UniGene:Mm.470599 HSSP:P25500
ProteinModelPortal:Q6PCL9 SMR:Q6PCL9 PhosphoSite:Q6PCL9
PaxDb:Q6PCL9 PRIDE:Q6PCL9 Ensembl:ENSMUST00000020513 GeneID:216578
KEGG:mmu:216578 UCSC:uc007ifp.2 InParanoid:Q6PCL9 NextBio:375224
Bgee:Q6PCL9 CleanEx:MM_PAPOLG Genevestigator:Q6PCL9
GermOnline:ENSMUSG00000020273 Uniprot:Q6PCL9
Length = 739
Score = 1431 (508.8 bits), Expect = 8.0e-168, Sum P(2) = 8.0e-168
Identities = 264/402 (65%), Positives = 322/402 (80%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI ++
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDI 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
Score = 223 (83.6 bits), Expect = 8.0e-168, Sum P(2) = 8.0e-168
Identities = 58/142 (40%), Positives = 79/142 (55%)
Query: 455 GENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMK 510
G + SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M+KDGMK
Sbjct: 422 GNKEHHKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMK 481
Query: 511 IEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELG-DKSRPRLDSDS 569
IE HVKKKQL YLPA +L+K KK+ S +S + +LD D SR D+DS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKSLSDVSRSSGGLQSKRSSLDSTCLDSSR---DTDS 538
Query: 570 NS-LSDKVN-NISNNGDQSSSE 589
+ + V+ N +N D + E
Sbjct: 539 GTPFNSPVSANKPSNPDSPTGE 560
>RGD|1310337 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310337 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
CTD:64895 OrthoDB:EOG4R23T8 EMBL:CH473996 IPI:IPI00365079
RefSeq:NP_001100714.1 UniGene:Rn.27992 Ensembl:ENSRNOT00000008919
GeneID:305586 KEGG:rno:305586 UCSC:RGD:1310337 NextBio:654829
Uniprot:D3ZAN6
Length = 739
Score = 1432 (509.1 bits), Expect = 2.1e-167, Sum P(2) = 2.1e-167
Identities = 265/402 (65%), Positives = 322/402 (80%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI ++
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDI 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVR 208
D V +LRAVE+AFVPVIK FDGIEID++FARLA++ I +C+R
Sbjct: 139 QDGVRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
Score = 218 (81.8 bits), Expect = 2.1e-167, Sum P(2) = 2.1e-167
Identities = 56/148 (37%), Positives = 79/148 (53%)
Query: 455 GENTSPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMK 510
G + SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M+KDGMK
Sbjct: 422 GNKEHHKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMK 481
Query: 511 IEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDE-LGDKSRPRLDSDS 569
IE HVKKKQL YLPA +L+K KK+ S +S + +LD D SR D+DS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKSLSDVSRSSGGLQSKRSSLDSNCLDSSR---DTDS 538
Query: 570 NSLSDKVNNIS--NNGDQSSSECTEDNS 595
+ + + +N D + + N+
Sbjct: 539 GTPFNSPGSAHKPSNPDSPTGDAERSNA 566
>UNIPROTKB|P51003 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IBA] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006378 "mRNA
polyadenylation" evidence=NAS] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0043631 "RNA polyadenylation" evidence=ISS]
[GO:0000287 "magnesium ion binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0030145 "manganese ion binding"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0031124 "mRNA 3'-end processing"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005524 GO:GO:0005737 GO:GO:0005654 GO:GO:0000287
Reactome:REACT_1675 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0004652
Reactome:REACT_78 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 HOVERGEN:HBG053502 OMA:SPVTTQG
EMBL:BC000927 EMBL:BC036014 EMBL:BX248301 EMBL:BX248753
EMBL:BX161482 EMBL:X76770 IPI:IPI00384028 IPI:IPI01025082
RefSeq:NP_001238935.1 RefSeq:NP_001238936.1 RefSeq:NP_116021.2
UniGene:Hs.253726 ProteinModelPortal:P51003 SMR:P51003
DIP:DIP-27610N IntAct:P51003 MINT:MINT-125699 STRING:P51003
PhosphoSite:P51003 DMDM:59803092 PaxDb:P51003 PeptideAtlas:P51003
PRIDE:P51003 Ensembl:ENST00000216277 Ensembl:ENST00000557320
Ensembl:ENST00000557471 GeneID:10914 KEGG:hsa:10914 UCSC:uc001yfo.3
UCSC:uc001yfq.3 GeneCards:GC14P096969 HGNC:HGNC:14981 HPA:HPA001788
MIM:605553 neXtProt:NX_P51003 PharmGKB:PA32932 InParanoid:P51003
OrthoDB:EOG4J6RQB PhylomeDB:P51003 ChiTaRS:PAPOLA GenomeRNAi:10914
NextBio:41453 ArrayExpress:P51003 Bgee:P51003 CleanEx:HS_PAPOLA
Genevestigator:P51003 GermOnline:ENSG00000090060 Uniprot:P51003
Length = 745
Score = 1464 (520.4 bits), Expect = 4.4e-167, Sum P(2) = 4.4e-167
Identities = 272/413 (65%), Positives = 331/413 (80%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXX 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 XXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
Score = 183 (69.5 bits), Expect = 4.4e-167, Sum P(2) = 4.4e-167
Identities = 52/153 (33%), Positives = 79/153 (51%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
+P +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI
Sbjct: 427 NPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 486
Query: 515 HVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLS 573
HVK+KQL + LP H+L+K KK + G + T+ D ++D S P S + + S
Sbjct: 487 HVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKT-S 545
Query: 574 DKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++ S+ G S + S++ + SV
Sbjct: 546 PLNSSGSSQGRNSPAPAVTAASVTNIQATEVSV 578
Score = 44 (20.5 bits), Expect = 2.2e-152, Sum P(2) = 2.2e-152
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 528 HMLKKDKKTKSGDQNTSAKKRKSDQALDELG-DKSRPRLDSDSNSLSDKVNNISNNGDQS 586
H + KKTK+ + TS + L G DK+ + D+ + + + I
Sbjct: 656 HKEESPKKTKTEEDETS----EDANCLALSGHDKTEAKEQLDTETSTTQSETIQTAASLL 711
Query: 587 SSECTEDNSLSQVYGL 602
+S+ T LS + L
Sbjct: 712 ASQKTSSTDLSDIPAL 727
>MGI|MGI:109301 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0006369 "termination of
RNA polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:109301 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000287 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OMA:SPVTTQG OrthoDB:EOG4J6RQB ChiTaRS:PAPOLA
EMBL:U52197 EMBL:U58134 EMBL:U58135 EMBL:AB086650 IPI:IPI00224655
IPI:IPI00224656 IPI:IPI00266738 IPI:IPI00467146 RefSeq:NP_035242.1
UniGene:Mm.255877 ProteinModelPortal:Q61183 SMR:Q61183
STRING:Q61183 PhosphoSite:Q61183 PaxDb:Q61183 PRIDE:Q61183
DNASU:18789 Ensembl:ENSMUST00000021535 Ensembl:ENSMUST00000109901
Ensembl:ENSMUST00000166735 GeneID:18789 KEGG:mmu:18789
UCSC:uc007oyv.1 UCSC:uc007oyx.1 InParanoid:Q61183 NextBio:295064
Bgee:Q61183 CleanEx:MM_PAPOLA Genevestigator:Q61183
GermOnline:ENSMUSG00000021111 Uniprot:Q61183
Length = 739
Score = 1464 (520.4 bits), Expect = 4.4e-167, Sum P(2) = 4.4e-167
Identities = 272/413 (65%), Positives = 331/413 (80%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXX 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 XXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
Score = 183 (69.5 bits), Expect = 4.4e-167, Sum P(2) = 4.4e-167
Identities = 53/153 (34%), Positives = 79/153 (51%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
SP +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI
Sbjct: 427 SPDREEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAM 486
Query: 515 HVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLS 573
HVK+KQL + LP+H+L+K KK + G + T+ D ++D S P S + S
Sbjct: 487 HVKRKQLHQLLPSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKT-S 545
Query: 574 DKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++ S+ G S + S++ + SV
Sbjct: 546 PLNSSGSSQGRNSPAPAVTAASVTSIQASEVSV 578
Score = 38 (18.4 bits), Expect = 9.3e-152, Sum P(2) = 9.3e-152
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 534 KKTKSGDQNTSAKKRKSDQALDELGD 559
K+T S ++ S KK K+++ DE +
Sbjct: 644 KRTSSPNKEESPKKTKTEE--DETSE 667
>UNIPROTKB|G3XAH6 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 EMBL:AL163051
Gene3D:3.30.70.590 SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3XAH6 SMR:G3XAH6 Ensembl:ENST00000392990
ArrayExpress:G3XAH6 Bgee:G3XAH6 Uniprot:G3XAH6
Length = 724
Score = 1464 (520.4 bits), Expect = 4.4e-167, Sum P(2) = 4.4e-167
Identities = 272/413 (65%), Positives = 331/413 (80%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXX 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 XXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
Score = 183 (69.5 bits), Expect = 4.4e-167, Sum P(2) = 4.4e-167
Identities = 52/153 (33%), Positives = 79/153 (51%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
+P +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI
Sbjct: 427 NPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 486
Query: 515 HVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLS 573
HVK+KQL + LP H+L+K KK + G + T+ D ++D S P S + + S
Sbjct: 487 HVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKT-S 545
Query: 574 DKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++ S+ G S + S++ + SV
Sbjct: 546 PLNSSGSSQGRNSPAPAVTAASVTNIQATEVSV 578
>UNIPROTKB|P25500 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IDA] [GO:0000287
"magnesium ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0043631 "RNA polyadenylation"
evidence=IDA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000287 GO:GO:0006378 GO:GO:0003723
GO:GO:0030145 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 EMBL:X61585
EMBL:X63436 IPI:IPI00686724 IPI:IPI00699231 PIR:S17875 PIR:S17925
PIR:S18642 RefSeq:NP_788820.1 UniGene:Bt.109586 PDB:1F5A PDB:1Q78
PDB:1Q79 PDBsum:1F5A PDBsum:1Q78 PDBsum:1Q79
ProteinModelPortal:P25500 SMR:P25500 STRING:P25500
Ensembl:ENSBTAT00000005300 GeneID:338051 KEGG:bta:338051 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 InParanoid:P25500 OMA:SPVTTQG
EvolutionaryTrace:P25500 NextBio:20812502 ArrayExpress:P25500
Uniprot:P25500
Length = 739
Score = 1465 (520.8 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 272/413 (65%), Positives = 331/413 (80%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXX 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 XXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
Score = 179 (68.1 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 44/110 (40%), Positives = 62/110 (56%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
+P +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI
Sbjct: 427 NPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 486
Query: 515 HVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRP 563
HVK+KQL + LP+H+L+K KK + G + T D ++D S P
Sbjct: 487 HVKRKQLHQLLPSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVP 536
Score = 42 (19.8 bits), Expect = 2.8e-152, Sum P(2) = 2.8e-152
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 528 HMLKKDKKTKSGDQNTSAKKRKSDQALDELG-DKSRPRLDSDSNSLSDKVNNISNNGDQS 586
H + KKTK+ + TS + L G DK+ + D+ + + + I
Sbjct: 650 HKEESPKKTKTEEDETS----EDANCLALSGHDKTETKEQLDTETSTTQSETIQTATSLL 705
Query: 587 SSECTEDNSLSQVYGL 602
+S+ T LS + L
Sbjct: 706 ASQKTSSTDLSDIPAL 721
>UNIPROTKB|G3MYA2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:DAAA02053163
Ensembl:ENSBTAT00000063150 Uniprot:G3MYA2
Length = 718
Score = 1465 (520.8 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 272/413 (65%), Positives = 331/413 (80%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXX 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 XXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
Score = 179 (68.1 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 44/110 (40%), Positives = 62/110 (56%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
+P +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI
Sbjct: 427 NPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 486
Query: 515 HVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRP 563
HVK+KQL + LP+H+L+K KK + G + T D ++D S P
Sbjct: 487 HVKRKQLHQLLPSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVP 536
>UNIPROTKB|Q3T0A2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003 UniGene:Bt.109586
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OrthoDB:EOG4J6RQB EMBL:DAAA02053163
EMBL:BC102481 IPI:IPI00705304 SMR:Q3T0A2 STRING:Q3T0A2
Ensembl:ENSBTAT00000021001 Uniprot:Q3T0A2
Length = 693
Score = 1465 (520.8 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 272/413 (65%), Positives = 331/413 (80%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXX 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 XXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
Score = 179 (68.1 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 44/110 (40%), Positives = 62/110 (56%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
+P +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI
Sbjct: 427 NPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 486
Query: 515 HVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRP 563
HVK+KQL + LP+H+L+K KK + G + T D ++D S P
Sbjct: 487 HVKRKQLHQLLPSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVP 536
>UNIPROTKB|A5D7N5 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DAAA02031008 EMBL:DAAA02031009 EMBL:BC140625 IPI:IPI00695296
RefSeq:NP_001091535.1 UniGene:Bt.24299 SMR:A5D7N5
Ensembl:ENSBTAT00000009749 GeneID:529071 KEGG:bta:529071
InParanoid:A5D7N5 NextBio:20874959 Uniprot:A5D7N5
Length = 740
Score = 1435 (510.2 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 266/402 (66%), Positives = 322/402 (80%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI EV
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
Score = 209 (78.6 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 57/135 (42%), Positives = 77/135 (57%)
Query: 467 SMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLS 522
SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M+K+GMKIE HVKKKQL
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLH 493
Query: 523 EYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA-LDE-LGDKSRPRLDSDSNSLSDKVNNIS 580
YLPA +L+K KK D S+ +S ++ LD D SR D+++ S N
Sbjct: 494 HYLPAEILQKKKKQSLSDVTRSSSGPQSKRSSLDSNCLDSSRDT-DNETPFNSPVSANKP 552
Query: 581 NNGDQSSSECTEDNS 595
+ D S TE N+
Sbjct: 553 SKPDIPPSGETERNN 567
>UNIPROTKB|F1SAQ7 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:CT827800
Ensembl:ENSSSCT00000002783 Uniprot:F1SAQ7
Length = 693
Score = 1464 (520.4 bits), Expect = 1.2e-166, Sum P(2) = 1.2e-166
Identities = 272/413 (65%), Positives = 331/413 (80%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXX 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 XXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
Score = 179 (68.1 bits), Expect = 1.2e-166, Sum P(2) = 1.2e-166
Identities = 52/153 (33%), Positives = 77/153 (50%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
+P +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI
Sbjct: 427 NPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 486
Query: 515 HVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLS 573
HVK+KQL + LP H+L+K KK + G + T D ++D S P S + S
Sbjct: 487 HVKRKQLHQLLPNHVLQKKKKHSTDGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKT-S 545
Query: 574 DKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++ S+ G S + S++ + SV
Sbjct: 546 PLNSSGSSQGRNSPAPAVTAASVTNIQATEVSV 578
>UNIPROTKB|I3L6F0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:CT827800
Ensembl:ENSSSCT00000027948 Uniprot:I3L6F0
Length = 734
Score = 1464 (520.4 bits), Expect = 1.2e-166, Sum P(2) = 1.2e-166
Identities = 272/413 (65%), Positives = 331/413 (80%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 25 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 84
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 85 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 144
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXX 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 145 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 204
Query: 198 XXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 205 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 264
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 265 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 324
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 325 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 384
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 385 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 437
Score = 179 (68.1 bits), Expect = 1.2e-166, Sum P(2) = 1.2e-166
Identities = 52/153 (33%), Positives = 77/153 (50%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
+P +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI
Sbjct: 443 NPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 502
Query: 515 HVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLS 573
HVK+KQL + LP H+L+K KK + G + T D ++D S P S + S
Sbjct: 503 HVKRKQLHQLLPNHVLQKKKKHSTDGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKT-S 561
Query: 574 DKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++ S+ G S + S++ + SV
Sbjct: 562 PLNSSGSSQGRNSPAPAVTAASVTNIQATEVSV 594
>UNIPROTKB|F1SQL7 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 CTD:64895 OMA:IDGSSKR EMBL:CU467691
RefSeq:XP_003125156.1 UniGene:Ssc.62549 Ensembl:ENSSSCT00000009186
GeneID:100523547 KEGG:ssc:100523547 Uniprot:F1SQL7
Length = 741
Score = 1435 (510.2 bits), Expect = 1.5e-166, Sum P(2) = 1.5e-166
Identities = 266/402 (66%), Positives = 322/402 (80%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI EV
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVTDEIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
Score = 207 (77.9 bits), Expect = 1.5e-166, Sum P(2) = 1.5e-166
Identities = 51/111 (45%), Positives = 69/111 (62%)
Query: 467 SMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLS 522
SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M+K+GMKIE HVKKKQL
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLH 493
Query: 523 EYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA-LDE-LGDKSRPRLDSDSNS 571
YLPA +L+K KK D S+ +S ++ LD D SR D+D+ +
Sbjct: 494 HYLPAEILQKKKKQSLSDVTRSSSGPQSKRSSLDSNCLDSSR---DTDNGT 541
>UNIPROTKB|F1PDS0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IBA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0005737 GO:GO:0006378 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 OMA:SPVTTQG
EMBL:AAEX03005970 EMBL:AAEX03005971 Ensembl:ENSCAFT00000028221
Uniprot:F1PDS0
Length = 745
Score = 1464 (520.4 bits), Expect = 2.4e-166, Sum P(2) = 2.4e-166
Identities = 272/413 (65%), Positives = 331/413 (80%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 15 GSQQTQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 74
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 75 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 134
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXX 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 135 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 194
Query: 198 XXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 195 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 254
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 255 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 314
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF
Sbjct: 315 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 374
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
KY+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 375 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 427
Score = 176 (67.0 bits), Expect = 2.4e-166, Sum P(2) = 2.4e-166
Identities = 44/110 (40%), Positives = 61/110 (55%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
+P +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI
Sbjct: 433 NPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 492
Query: 515 HVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRP 563
HVK+KQL + LP H+L+K KK + G + T D ++D S P
Sbjct: 493 HVKRKQLHQLLPNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVP 542
Score = 43 (20.2 bits), Expect = 2.8e-152, Sum P(2) = 2.8e-152
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 528 HMLKKDKKTKSGDQNTSAKKRKSDQALDELG-DKSRPRLDSDSNSLSDKVNNISNNGDQS 586
H + KKTK+ + TS + L G DK+ + D+ + + + I
Sbjct: 656 HKEESPKKTKTEEDETS----EDANCLALSGHDKTETKEQLDTETSTTQSETIHTAASLL 711
Query: 587 SSECTEDNSLSQVYGL 602
+S+ T LS + L
Sbjct: 712 ASQKTSSTDLSDIPAL 727
>UNIPROTKB|J9NS30 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:IDGSSKR EMBL:AAEX03007549
Ensembl:ENSCAFT00000044895 Uniprot:J9NS30
Length = 813
Score = 1427 (507.4 bits), Expect = 3.9e-166, Sum P(2) = 3.9e-166
Identities = 264/402 (65%), Positives = 322/402 (80%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 19 YGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVR 208
D + +LRAVE+AFVPVIK FDGIEID++FARLA++ I +C+R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNGCRVT+EIL LVPN E FRL LR +KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQL
Sbjct: 199 SLNGCRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNAAASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YPQQNST+NVS STRT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL A
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
S+ + E+ LEW GL+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
Score = 211 (79.3 bits), Expect = 3.9e-166, Sum P(2) = 3.9e-166
Identities = 58/137 (42%), Positives = 81/137 (59%)
Query: 467 SMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLS 522
SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M+K+GMKIE HVKKKQL
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLH 493
Query: 523 EYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA-LDE-LGDKSRPRLDSDSNS-LSDKVN-N 578
YLPA +L+K KK D + S+ +S ++ LD D SR D+D+ + + V+ N
Sbjct: 494 HYLPAEILQKKKKQSLSDVSRSSSGPQSKRSSLDSNCLDSSR---DTDNGTPFNSPVSIN 550
Query: 579 ISNNGDQSSSECTEDNS 595
+ D S TE N+
Sbjct: 551 KPSKPDLPPSGETERNN 567
>ZFIN|ZDB-GENE-030131-3507 [details] [associations]
symbol:papola "poly(A) polymerase alpha"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0031123 "RNA 3'-end
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 ZFIN:ZDB-GENE-030131-3507 GO:GO:0005634
GO:GO:0005737 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 EMBL:AL953887 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 GeneTree:ENSGT00390000017928
HOGENOM:HOG000204376 HOVERGEN:HBG053502 IPI:IPI00860939
RefSeq:NP_991321.2 UniGene:Dr.25690 SMR:Q5SNY2
Ensembl:ENSDART00000053858 GeneID:404041 KEGG:dre:404041
NextBio:20817515 Uniprot:Q5SNY2
Length = 723
Score = 1451 (515.8 bits), Expect = 1.1e-163, Sum P(2) = 1.1e-163
Identities = 272/405 (67%), Positives = 323/405 (79%)
Query: 26 PVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWI 85
P YG+T+ ++L+PP + DL TR+L E L+P+ V E + EL R+ VL KLN LVK WI
Sbjct: 16 PKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWI 75
Query: 86 KEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEK 145
+EVS AKNIP +V + VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R D+FSSF+EK
Sbjct: 76 REVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERTDFFSSFYEK 135
Query: 146 LKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQK 205
LK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 206 CVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARI 265
C+RSLNGCRVTDEIL LVPNIENFRL LR IKLWAK+H IYSN+LG+LGGVSWAMLVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 266 CQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPII 325
CQLYPNA A+TLV KFFLVFS+W+WP PVLLK+P++ NL PVWDPRV +DRYHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 326 TPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLV 385
TPAYPQQNST+NVS STR IM EEFK+G I+++I K W KLFE PNFF KY+HY+V
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKHYIV 375
Query: 386 LIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
L+AS+ + + LEW GL+ESK+R L+GNLE+N I LAHVNP+ +
Sbjct: 376 LLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF 420
Score = 164 (62.8 bits), Expect = 1.1e-163, Sum P(2) = 1.1e-163
Identities = 50/155 (32%), Positives = 75/155 (48%)
Query: 466 ASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQL 521
++MW IG+ F + N+ ++LT+DIQ FT+ V+ QA SKM + MKI HVK+KQL
Sbjct: 433 STMWVIGIVFKKMEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQDMKITAMHVKRKQL 492
Query: 522 SEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSN-------SLSD 574
+ LP + + K+ S D + D +LD S P S S
Sbjct: 493 HQLLPEVAIHRSKRKHSSDGVRAMNDSNLDLSLDSDNSMSVPSPTGPSAAKIARAPSPQG 552
Query: 575 KVNNISNNGD-QSSSECTEDNS-LSQVYGLNDSVA 607
+N + Q +E T +N+ L+ V G + S A
Sbjct: 553 STGTATNTSELQGKTEATGENTHLASVDGTSSSNA 587
>UNIPROTKB|Q9NRJ5 [details] [associations]
symbol:PAPOLB "Poly(A) polymerase beta" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0006378 GO:GO:0003723
EMBL:AC092610 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 EMBL:AF218840 EMBL:BC036653 IPI:IPI00024525
RefSeq:NP_064529.4 UniGene:Hs.487409 ProteinModelPortal:Q9NRJ5
SMR:Q9NRJ5 STRING:Q9NRJ5 PhosphoSite:Q9NRJ5 DMDM:18203318
PaxDb:Q9NRJ5 PRIDE:Q9NRJ5 DNASU:56903 Ensembl:ENST00000404991
GeneID:56903 KEGG:hsa:56903 CTD:56903 GeneCards:GC07M004897
HGNC:HGNC:15970 MIM:607436 neXtProt:NX_Q9NRJ5 PharmGKB:PA32933
InParanoid:Q9NRJ5 OMA:FPGGVAW OrthoDB:EOG4THVSN GenomeRNAi:56903
NextBio:62363 ArrayExpress:Q9NRJ5 Bgee:Q9NRJ5 CleanEx:HS_PAPOLB
Genevestigator:Q9NRJ5 Uniprot:Q9NRJ5
Length = 636
Score = 1429 (508.1 bits), Expect = 1.2e-160, Sum P(2) = 1.2e-160
Identities = 269/413 (65%), Positives = 324/413 (78%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G PQ P YG+++ ++L+ P + D T+ L E L+P+ V E +EEL R+ VL KL
Sbjct: 9 GPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +K++P +V E VGGKI+TFGSYRLGVH KGADIDALCVAP HVDR+D
Sbjct: 69 NNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXX 197
+F+SF+ KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 129 FFTSFYAKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 XXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVAD 317
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +D
Sbjct: 249 WAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSD 308
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPAYPQQNST+NVSISTR +M EEFKQG I+ +I K W KLFE P+FF
Sbjct: 309 RYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFF 368
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 QKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
Score = 157 (60.3 bits), Expect = 1.2e-160, Sum P(2) = 1.2e-160
Identities = 35/84 (41%), Positives = 52/84 (61%)
Query: 459 SPPVSGVASMWFIGLDFIAAN----VILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
+P + +MW IGL + + ++LTYDIQ FT+ V+ QA SKM + GMKI
Sbjct: 427 NPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAM 486
Query: 515 HVKKKQLSEYLPAHMLKKDKKTKS 538
H+++K+L + LP H+L+ DKK S
Sbjct: 487 HLRRKELHQLLPHHVLQ-DKKAHS 509
>UNIPROTKB|I3LRR6 [details] [associations]
symbol:PAPOLB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005783 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:FPGGVAW EMBL:CU928347
Ensembl:ENSSSCT00000031977 Uniprot:I3LRR6
Length = 636
Score = 1429 (508.1 bits), Expect = 8.6e-160, Sum P(2) = 8.6e-160
Identities = 265/411 (64%), Positives = 324/411 (78%)
Query: 20 KPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNN 79
+P P YG+++ ++L+PP + D T++L E LKP+ V E +EEL R+ +L KLN
Sbjct: 25 QPPPPPPKRYGISSPISLAPPRETDCVLTQKLIETLKPFGVFEEEEELQRRILILEKLNY 84
Query: 80 LVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYF 139
LVKEWI+E+S +K++P V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D+F
Sbjct: 85 LVKEWIRELSESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFF 144
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXX 199
+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 145 TSFYDKLKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 204
Query: 200 XXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+C+RSLNGCRVTDEIL LVPNI+NFRL LR +KLWAK H IYSN+LG+LGGVSWA
Sbjct: 205 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWA 264
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
MLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRY
Sbjct: 265 MLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 324
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+FF K
Sbjct: 325 HLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQK 384
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
Y+HY+ L+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 385 YKHYIALLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 435
Score = 149 (57.5 bits), Expect = 8.6e-160, Sum P(2) = 8.6e-160
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 459 SPPVSGVASMWFIGLDFIA---ANVI-LNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
SP +MW IGL ++++ ++LTYDIQ FT+ V+ QA SKM + MKI
Sbjct: 441 SPDKEEFRTMWVIGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNSKMFEMDMKIAAM 500
Query: 515 HVKKKQLSEYLPAHMLKKDKKTKSGDQNT 543
H+++K+L + LP H+L + KKT S +++
Sbjct: 501 HLRRKELHQLLPNHVLPQ-KKTPSHSEDS 528
>RGD|1310946 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310946 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 EMBL:CH474012 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:56903
EMBL:BC079046 IPI:IPI00363752 RefSeq:NP_001012020.1
UniGene:Rn.210888 SMR:Q6AYH1 GeneID:304300 KEGG:rno:304300
UCSC:RGD:1310946 NextBio:652828 Genevestigator:Q6AYH1
Uniprot:Q6AYH1
Length = 642
Score = 1431 (508.8 bits), Expect = 4.7e-159, Sum P(2) = 4.7e-159
Identities = 266/414 (64%), Positives = 326/414 (78%)
Query: 17 QDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSK 76
Q + + AP YG+++ ++L+ P D + T++L E L+P+ V E +EEL R+ +L K
Sbjct: 9 QGAQQPAPAPKQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQK 68
Query: 77 LNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA 136
LNNLVKEWI+E+S ++N+P V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR
Sbjct: 69 LNNLVKEWIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN 128
Query: 137 DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXX 196
D+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 129 DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDD 188
Query: 197 XXXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
+C+RSLNGCRVTDEIL LVPNI++FRL LR IKLWAK H IYSN+LG+LGGV
Sbjct: 189 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGV 248
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA 316
SWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +
Sbjct: 249 SWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPS 308
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSF 368
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
F KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 369 FQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
Score = 140 (54.3 bits), Expect = 4.7e-159, Sum P(2) = 4.7e-159
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 467 SMWFIGLDFIA---ANVI-LNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLS 522
+MW IGL + ++ ++LTYDIQ FT+ V+ QA SKM + MKI H+++K+L
Sbjct: 436 TMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELH 495
Query: 523 EYLPAHMLKKDKKT 536
+ LP H+L+K K+T
Sbjct: 496 QLLPNHVLQK-KET 508
Score = 38 (18.4 bits), Expect = 2.9e-148, Sum P(2) = 2.9e-148
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 418 PHINLAHVNP 427
P ++L HVNP
Sbjct: 573 PDVSLQHVNP 582
>MGI|MGI:1932115 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;ISA;IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IPI] [GO:0006369 "termination of RNA polymerase
II transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 MGI:MGI:1932115 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 GO:GO:0043631 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 CTD:56903 OMA:FPGGVAW OrthoDB:EOG4THVSN
EMBL:AF039957 EMBL:AB030729 IPI:IPI00230087 RefSeq:NP_064327.1
UniGene:Mm.441372 ProteinModelPortal:Q9WVP6 SMR:Q9WVP6
MINT:MINT-6167909 STRING:Q9WVP6 PhosphoSite:Q9WVP6 PaxDb:Q9WVP6
PRIDE:Q9WVP6 GeneID:56522 KEGG:mmu:56522 InParanoid:Q9WVP6
NextBio:312850 Bgee:Q9WVP6 CleanEx:MM_PAPOLB Genevestigator:Q9WVP6
Uniprot:Q9WVP6
Length = 641
Score = 1427 (507.4 bits), Expect = 1.3e-158, Sum P(2) = 1.3e-158
Identities = 265/414 (64%), Positives = 326/414 (78%)
Query: 17 QDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSK 76
Q + + AP +G+++ ++L+ P D + T++L E L+P+ V E +EEL R+ +L K
Sbjct: 8 QGAQQPAPAPKQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQK 67
Query: 77 LNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA 136
LNNLVKEWI+E+S ++N+P V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR
Sbjct: 68 LNNLVKEWIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN 127
Query: 137 DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXX 196
D+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 128 DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDD 187
Query: 197 XXXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGV 256
+C+RSLNGCRVTDEIL LVPNI++FRL LR IKLWAK H IYSN+LG+LGGV
Sbjct: 188 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGV 247
Query: 257 SWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVA 316
SWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +
Sbjct: 248 SWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPS 307
Query: 317 DRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNF 376
DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+ +I K W KLFE P+F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSF 367
Query: 377 FTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
F KY+HY+VL+AS+ + + LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 368 FQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
Score = 140 (54.3 bits), Expect = 1.3e-158, Sum P(2) = 1.3e-158
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 467 SMWFIGLDFIA---ANVI-LNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLS 522
+MW IGL + ++ ++LTYDIQ FT+ V+ QA SKM + MKI H+++K+L
Sbjct: 435 TMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELH 494
Query: 523 EYLPAHMLKKDKKT 536
+ LP H+L+K K+T
Sbjct: 495 QLLPNHVLQK-KET 507
Score = 43 (20.2 bits), Expect = 2.2e-148, Sum P(2) = 2.2e-148
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 418 PHINLAHVNPECYTDTTGVIANGSGSPEITAE 449
P ++L HVNP +++G IA P+I ++
Sbjct: 572 PDVSLQHVNP---IESSG-IALSESIPQIPSQ 599
>UNIPROTKB|F1NL95 [details] [associations]
symbol:F1NL95 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008811
"chloramphenicol O-acetyltransferase activity" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00600779
Ensembl:ENSGALT00000012751 OMA:RYHVMPI Uniprot:F1NL95
Length = 748
Score = 1396 (496.5 bits), Expect = 1.7e-150, Sum P(2) = 1.7e-150
Identities = 254/409 (62%), Positives = 321/409 (78%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
Q+Q YG+T+ ++L+PP +D T++L E ++ + V E +EEL+ R+ VL KLNNLV
Sbjct: 12 QNQPQRHYGITSPISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNLV 71
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
KEWI E+ +KN+PP+V E VGG+I+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F S
Sbjct: 72 KEWIFELGESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 131
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXX 201
FFEKLK +E+ +LRAVE+A+VPV+K FDGIEID++FARL ++ +
Sbjct: 132 FFEKLKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRS 191
Query: 202 XXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+C+RSLNGCRVTDEIL LVPN ENF+L LR IKLWAK+ GIYSN+LG+LGGVSWAML
Sbjct: 192 LDIRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAML 251
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR CQL+PNA ASTLV KFFL+FS+W+WP PVLLK+P+ NL PVWDPRVN +DRYH+
Sbjct: 252 VARTCQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHV 311
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYPQQNST+NVS STR ++ EE K G ++ +I G++ W KLFE PNFF KY+
Sbjct: 312 MPIITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYK 371
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
HY+VL AS+ + E LEW GL+ESK+R L+GNLERN IN+AHVNP+ +
Sbjct: 372 HYIVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSF 420
Score = 94 (38.1 bits), Expect = 1.7e-150, Sum P(2) = 1.7e-150
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 463 SGVASMWFIGLDF----IAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMK-IEVRHVK 517
S SMWF+G+ F A + ++LTYDIQ FT+AV + Q ++K + E +
Sbjct: 430 SRYVSMWFLGIIFRKLESAESTKIDLTYDIQSFTDAVIKKENQVDLLKSSVLWSEYTTIS 489
Query: 518 KKQLSEY---LPAHMLKKDKKTKSGDQNTSA---KKRKSDQALDELGDK-SRPRLDSDSN 570
++ L Y + + L + QN S K+ S+++L+ D SR +S S
Sbjct: 490 RQFLHIYSQDVACYDLFQQSMLNIS-QNASGLRCKRASSNESLNSSRDNHSRTPYNSSSL 548
Query: 571 SLSDKVNNISNNGDQSSSECTEDNSLSQVYGLND 604
S+ K+ D S++E + ++ + G N+
Sbjct: 549 SMISKL-------DTSTAEMERNATIWRTNGANN 575
>UNIPROTKB|F1P3A1 [details] [associations]
symbol:F1P3A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008811 "chloramphenicol
O-acetyltransferase activity" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00820385
Ensembl:ENSGALT00000040310 Uniprot:F1P3A1
Length = 738
Score = 1396 (496.5 bits), Expect = 3.6e-150, Sum P(2) = 3.6e-150
Identities = 254/409 (62%), Positives = 321/409 (78%)
Query: 22 QSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLV 81
Q+Q YG+T+ ++L+PP +D T++L E ++ + V E +EEL+ R+ VL KLNNLV
Sbjct: 12 QNQPQRHYGITSPISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNLV 71
Query: 82 KEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSS 141
KEWI E+ +KN+PP+V E VGG+I+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F S
Sbjct: 72 KEWIFELGESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 131
Query: 142 FFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXX 201
FFEKLK +E+ +LRAVE+A+VPV+K FDGIEID++FARL ++ +
Sbjct: 132 FFEKLKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRS 191
Query: 202 XXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAML 261
+C+RSLNGCRVTDEIL LVPN ENF+L LR IKLWAK+ GIYSN+LG+LGGVSWAML
Sbjct: 192 LDIRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAML 251
Query: 262 VARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHL 321
VAR CQL+PNA ASTLV KFFL+FS+W+WP PVLLK+P+ NL PVWDPRVN +DRYH+
Sbjct: 252 VARTCQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHV 311
Query: 322 MPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYR 381
MPIITPAYPQQNST+NVS STR ++ EE K G ++ +I G++ W KLFE PNFF KY+
Sbjct: 312 MPIITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYK 371
Query: 382 HYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
HY+VL AS+ + E LEW GL+ESK+R L+GNLERN IN+AHVNP+ +
Sbjct: 372 HYIVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSF 420
Score = 91 (37.1 bits), Expect = 3.6e-150, Sum P(2) = 3.6e-150
Identities = 39/143 (27%), Positives = 67/143 (46%)
Query: 463 SGVASMWFIGLDF----IAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMK-IEVRHVK 517
S SMWF+G+ F A + ++LTYDIQ FT+AV + Q ++K + E +
Sbjct: 430 SRYVSMWFLGIIFRKLESAESTKIDLTYDIQSFTDAVIKKENQVDLLKSSVLWSEYTTIS 489
Query: 518 KKQLSEY---LPAHMLKKDKKTKSGDQNTSA---KKRKSDQALDELGDKSRPRLDSDSNS 571
++ L Y + + L + QN S K+ S+++L+ D + R +S+S
Sbjct: 490 RQFLHIYSQDVACYDLFQQSMLNIS-QNASGLRCKRASSNESLNSSRD-NHSRTPYNSSS 547
Query: 572 LSDKVNNIS---NNGDQSSSECT 591
L + N + NG + + T
Sbjct: 548 LRSESKNATIWRTNGANNREKMT 570
>RGD|1308673 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISO;IBA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0043631 "RNA polyadenylation" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0003723 GO:GO:0000398 GO:GO:0006369
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00567428
Ensembl:ENSRNOT00000047832 UCSC:RGD:1308673 ArrayExpress:F1MAC5
Uniprot:F1MAC5
Length = 681
Score = 1052 (375.4 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 199/298 (66%), Positives = 238/298 (79%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXX 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 XXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNV 315
WAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRV+V
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSV 306
Score = 179 (68.1 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 53/153 (34%), Positives = 78/153 (50%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
SP +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI
Sbjct: 369 SPDREEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAM 428
Query: 515 HVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKS-DQALDELGDKSRPRLDSDSNSLS 573
HVK+KQL + LP+H+L+K KK + +A S D ++D S P S + S
Sbjct: 429 HVKRKQLHQLLPSHVLQKRKKHSTEGVKLAALNDSSLDLSMDSDNSMSVPSPTSAMKT-S 487
Query: 574 DKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++ S+ G S + S++ + SV
Sbjct: 488 PLNSSGSSQGRNSPAPAVTAASVTSIQASEVSV 520
Score = 142 (55.0 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 366 MWDKLFETPNFFTKYRHYLVLIASSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAH 424
+WD FF H + L+ +S E Q LEW GL+ESK+R L+G+LE+N I LAH
Sbjct: 299 VWDPRVSVL-FFPLQIHTVQLLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAH 357
Query: 425 VNPECY 430
VNP+ +
Sbjct: 358 VNPQSF 363
Score = 37 (18.1 bits), Expect = 1.3e-121, Sum P(3) = 1.3e-121
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 534 KKTKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLS--DKVNNISNNGDQSSSECT 591
K+T S + S KK K+++ DE + D++ +LS DK G ++S+ +
Sbjct: 586 KRTSSPHKEESPKKTKTEE--DETSE------DANCLALSGHDKTETKEQVGMETSAAPS 637
Query: 592 E 592
E
Sbjct: 638 E 638
>UNIPROTKB|F1NDP1 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
EMBL:AADN02003685 IPI:IPI00587050 Ensembl:ENSGALT00000018089
ArrayExpress:F1NDP1 Uniprot:F1NDP1
Length = 620
Score = 1132 (403.5 bits), Expect = 2.0e-132, Sum P(2) = 2.0e-132
Identities = 208/302 (68%), Positives = 247/302 (81%)
Query: 129 APRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIP 188
APRHV+R+D+F+SF+EKLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 1 APRHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP 60
Query: 189 XXXXXXXXXXXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSN 248
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN
Sbjct: 61 EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSN 120
Query: 249 VLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPV 308
+LG+LGGVSWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PV
Sbjct: 121 ILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPV 180
Query: 309 WDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWD 368
WDPRVN +DRYHLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W
Sbjct: 181 WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWS 240
Query: 369 KLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE 428
KLFE PNFF KY+HY+VL+AS+ + + +LEW GL+ESK+R L+GNLE+N I LAHVNP+
Sbjct: 241 KLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQ 300
Query: 429 CY 430
+
Sbjct: 301 SF 302
Score = 187 (70.9 bits), Expect = 2.0e-132, Sum P(2) = 2.0e-132
Identities = 50/135 (37%), Positives = 73/135 (54%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
+P +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI R
Sbjct: 308 NPDKEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAR 367
Query: 515 HVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLS 573
HVK+KQL + LP H+L+K KK + G + T+ D ++D S P S ++++
Sbjct: 368 HVKRKQLHQLLPNHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSTSVP---SPTSAMK 424
Query: 574 DKVNNISNNGDQSSS 588
N S + SS
Sbjct: 425 TSPLNSSGSSQGRSS 439
>UNIPROTKB|D4A764 [details] [associations]
symbol:Papola "Protein Papola" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590
SUPFAM:SSF55003 IPI:IPI00776821 Ensembl:ENSRNOT00000057215
ArrayExpress:D4A764 Uniprot:D4A764
Length = 657
Score = 941 (336.3 bits), Expect = 7.3e-125, Sum P(3) = 7.3e-125
Identities = 181/271 (66%), Positives = 216/271 (79%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRAD 137
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADIDALCVAPRHVDR+D
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD 128
Query: 138 YFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXX 197
+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL+ IP
Sbjct: 129 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 188
Query: 198 XXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVS 257
+C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H IYSN+LG+LGGVS
Sbjct: 189 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 248
Query: 258 WAMLVARICQLYPNAAASTLVCKFFLVFSQW 288
WAMLVAR CQLYPNA ASTLV KFFLVFS+W
Sbjct: 249 WAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
Score = 179 (68.1 bits), Expect = 7.3e-125, Sum P(3) = 7.3e-125
Identities = 53/153 (34%), Positives = 78/153 (50%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
SP +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI
Sbjct: 345 SPDREEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAM 404
Query: 515 HVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKS-DQALDELGDKSRPRLDSDSNSLS 573
HVK+KQL + LP+H+L+K KK + +A S D ++D S P S + S
Sbjct: 405 HVKRKQLHQLLPSHVLQKRKKHSTEGVKLAALNDSSLDLSMDSDNSMSVPSPTSAMKT-S 463
Query: 574 DKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++ S+ G S + S++ + SV
Sbjct: 464 PLNSSGSSQGRNSPAPAVTAASVTSIQASEVSV 496
Score = 142 (55.0 bits), Expect = 7.3e-125, Sum P(3) = 7.3e-125
Identities = 27/50 (54%), Positives = 39/50 (78%)
Query: 381 RHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
RH VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 292 RH--VLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 339
Score = 37 (18.1 bits), Expect = 6.4e-110, Sum P(3) = 6.4e-110
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 534 KKTKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLS--DKVNNISNNGDQSSSECT 591
K+T S + S KK K+++ DE + D++ +LS DK G ++S+ +
Sbjct: 562 KRTSSPHKEESPKKTKTEE--DETSE------DANCLALSGHDKTETKEQVGMETSAAPS 613
Query: 592 E 592
E
Sbjct: 614 E 614
>WB|WBGene00009658 [details] [associations]
symbol:F43G6.5 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
OMA:FPGGVAW HSSP:P25500 EMBL:Z50070 EMBL:AL032651 PIR:C88325
PIR:T22140 RefSeq:NP_496524.1 ProteinModelPortal:G5EBX5 SMR:G5EBX5
EnsemblMetazoa:F43G6.5 GeneID:174816 KEGG:cel:CELE_F43G6.5
CTD:174816 WormBase:F43G6.5 NextBio:885628 Uniprot:G5EBX5
Length = 554
Score = 1054 (376.1 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 206/406 (50%), Positives = 271/406 (66%)
Query: 28 TYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKE 87
T+G++ ++ + PN DL+ T L + L YN E EE S R++VL KLN VK+WI++
Sbjct: 18 TFGVSQPISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLNGCVKQWIQK 77
Query: 88 VSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK 147
++ A+ P GG++ FGSYRLGVH GADID L +APRH RAD+FSSF + L
Sbjct: 78 ITEAR-YPKDQLFNAGGQLMAFGSYRLGVHSSGADIDTLVLAPRHATRADFFSSFKQMLA 136
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCV 207
EVT+L AVE AFVP++ M + GIEID LFARLALKE+P Q+ V
Sbjct: 137 KDPEVTNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQESV 196
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRV + +L+LVPN ENF + LR IKLWAK HGIYSN +G+ GG++WA+LVAR CQ
Sbjct: 197 RSLNGCRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQ 256
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLK-----KPDNVNLGFPVWDPRVNVADRYHLM 322
LYPNA+ S L+ K F +FS WKWP PVLL + D L VWDPR N +DRYHLM
Sbjct: 257 LYPNASPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLM 316
Query: 323 PIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRH 382
PI+TPA+PQQNST NVS S+ ++QEE K ++I NG W L E NFF++Y+H
Sbjct: 317 PIVTPAFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLLEEINFFSRYKH 376
Query: 383 YLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPE 428
++ L ++ + +D+L + G ES++R L+ LE+N I LAH+NP+
Sbjct: 377 FISLSMTAETEKDELAFGGFFESRIRQLVLILEKNQGIKLAHINPK 422
Score = 116 (45.9 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 35/117 (29%), Positives = 60/117 (51%)
Query: 467 SMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEV--RHVKKKQLSEY 524
S+WFIGL F L+LT DIQ F + +QA K ++ +E +VK+ L++
Sbjct: 433 SVWFIGLQFDENVKNLDLTKDIQQFKRNIDYQAKSVKDIEANCAVETDFSYVKRSDLAQT 492
Query: 525 LPAHMLKKDKKTKSGD-QNTSAKKRKSDQALDELGDKSRPRLD-SDSNSLSDKVNNI 579
+ LK+ K K + ++ +KKRK + + K + LD S+ +S+ + N+
Sbjct: 493 ISVKDLKQGKMYKKPESKDPVSKKRKVSENAPSVPKKQK--LDVSEKSSVESLLKNL 547
>DICTYBASE|DDB_G0288259 [details] [associations]
symbol:papA "poly(A) polymerase" species:44689
"Dictyostelium discoideum" [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA;ISS;IBA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
dictyBase:DDB_G0288259 GO:GO:0005524 GO:GO:0046872 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003723
EMBL:AAFI02000109 GO:GO:0005847 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 HSSP:P25500
RefSeq:XP_636814.1 ProteinModelPortal:Q54J73 STRING:Q54J73
EnsemblProtists:DDB0216279 GeneID:8626531 KEGG:ddi:DDB_G0288259
OMA:NINESST ProtClustDB:PTZ00418 Uniprot:Q54J73
Length = 809
Score = 1023 (365.2 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
Identities = 204/431 (47%), Positives = 277/431 (64%)
Query: 4 TQHSNSMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSET 63
+Q +S+ + H Q P G+T ++ +PP+ +D + + EL L +N+ E+
Sbjct: 29 SQLPSSLSVNNLHTTQGSTDQ-PTILGVTEPISTAPPSSIDFKLSTELENTLISFNLFES 87
Query: 64 DEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADI 123
EE R E+L KLN +V+EW K+VS+ K P A +V KI+TFGSYRLGVH G+DI
Sbjct: 88 PEESRKREEILGKLNQIVREWAKQVSLKKGYPEQTASEVVAKIFTFGSYRLGVHGPGSDI 147
Query: 124 DALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
D LCV P+H+ R+D+F + LK E+T+ V++AFVPVI M F GI ID+++A+LA
Sbjct: 148 DTLCVGPKHIMRSDFFDDLSDILKVHPEITEFTTVKDAFVPVITMVFSGIPIDLIYAKLA 207
Query: 184 LKEIPXXXXXXXXXXXXXXX-QKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKK 242
L IP +K + SLNGCRVTD+IL+LVPNI NFR+ALR IKLWA +
Sbjct: 208 LTAIPEELNDLIDESFLKNIDEKSILSLNGCRVTDQILKLVPNIPNFRMALRCIKLWAIR 267
Query: 243 HGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKK-PDN 301
GIYSN+LG+LGGVSWA+L ARICQLYPN+A ST++ +FF V+ WKWP P+LL +
Sbjct: 268 RGIYSNILGFLGGVSWALLTARICQLYPNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEG 327
Query: 302 VNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIY 361
LG VW+P+ D+ HLMPIITPAYP NST+NVS ST +M+ EF +G I+ I
Sbjct: 328 GILGPKVWNPK---RDKAHLMPIITPAYPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIE 384
Query: 362 NGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHIN 421
G+ W L E +FFT+Y Y+ + S++ ED +W G IESK+R LI NLE P +
Sbjct: 385 TGECTWKNLLEKCDFFTRYSFYIEIDCYSMNEEDSRKWEGWIESKLRFLISNLESTPKMK 444
Query: 422 LAHVNPECYTD 432
A P+ +T+
Sbjct: 445 FAVPYPKGFTN 455
Score = 110 (43.8 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
Identities = 35/118 (29%), Positives = 61/118 (51%)
Query: 465 VASMWFIGLDFIAANV-----ILNLTYDIQHFTNAVH-WQATQSKMMKDGMKIEVRHVKK 518
+ + +F+GL F +N ++LT + FT + W TQ D M I+V+++KK
Sbjct: 466 ICTSFFMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPN--PDTMDIKVQYIKK 523
Query: 519 KQLSEYL----PAHMLKKDKKTKS-GDQNTSAKKRKSDQALDELGDKSRPRLDSDSNS 571
KQL ++ P +K KK S G+ + + KK KS+ + ++L P + ++ NS
Sbjct: 524 KQLPAFVKDEGPEEPVKTTKKRSSTGEPSATRKKLKSENSDNKLNSPKSP-ITTNINS 580
>WB|WBGene00012528 [details] [associations]
symbol:pap-1 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0006378
GO:GO:0010171 GO:GO:0040011 GO:GO:0048477 GO:GO:0006351
GO:GO:0003723 GO:GO:0040035 GO:GO:0040027 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 225/515 (43%), Positives = 320/515 (62%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G++ ++L+ P+ D+ +T L E LK + E EE RMEVL LN LVKEW+K V+
Sbjct: 13 GVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNVT 72
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
K IP GGK++TFGSYRLGVH GADID L V PRH+DR+D+F+SF E L
Sbjct: 73 AMK-IPNGEGVNAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRSDFFTSFKEMLNND 131
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVRS 209
VT+L VEEAFVPV+K+ + G+E+D+LFARLALKE+P Q+ VRS
Sbjct: 132 PNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESVRS 191
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNGCRV +++L+LVP + F + LR IKLWAK HGIYSN +G+ GG++WA+LVAR CQLY
Sbjct: 192 LNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLY 251
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP-----VWDPRVNVADRYHLMPI 324
PNA+ S LV + F +FS W WP PV+L + +N P VWDPR DR+H+MPI
Sbjct: 252 PNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPI 311
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL 384
ITPA+P+QNST NV+ ST T+++ E + I DI GK+ W LFE NFF++Y+H++
Sbjct: 312 ITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKHFI 371
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSP 444
LI ++ + E++L + G +ES++R L+ +LERN I +AH +P + + +
Sbjct: 372 ALIMAAPNEEEELNYGGFLESRIRLLVQSLERNQDIIIAHNDPNKHKPSP------NAKF 425
Query: 445 EITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKM 504
++ E K ++WFIGL+F L+LT +IQ F V QA+ K
Sbjct: 426 DVNPENKR-------------VTVWFIGLEFAEHAKTLDLTNEIQRFKTNVELQASNVKG 472
Query: 505 MKDGMKIEVR--HVKKKQLSEYLPAHMLKKDKKTK 537
+ ++++ +VK+ L + + A L++ ++ K
Sbjct: 473 IGPNCQVQIDMFYVKRNSLIQVISAADLRRGRRWK 507
>UNIPROTKB|Q9U2P3 [details] [associations]
symbol:pap-1 "Protein PAP-1" species:6239 "Caenorhabditis
elegans" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
GO:GO:0006378 GO:GO:0010171 GO:GO:0040011 GO:GO:0048477
GO:GO:0006351 GO:GO:0003723 GO:GO:0040035 GO:GO:0040027
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HSSP:P25500 EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 225/515 (43%), Positives = 320/515 (62%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G++ ++L+ P+ D+ +T L E LK + E EE RMEVL LN LVKEW+K V+
Sbjct: 13 GVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNVT 72
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
K IP GGK++TFGSYRLGVH GADID L V PRH+DR+D+F+SF E L
Sbjct: 73 AMK-IPNGEGVNAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRSDFFTSFKEMLNND 131
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVRS 209
VT+L VEEAFVPV+K+ + G+E+D+LFARLALKE+P Q+ VRS
Sbjct: 132 PNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESVRS 191
Query: 210 LNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLY 269
LNGCRV +++L+LVP + F + LR IKLWAK HGIYSN +G+ GG++WA+LVAR CQLY
Sbjct: 192 LNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLY 251
Query: 270 PNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP-----VWDPRVNVADRYHLMPI 324
PNA+ S LV + F +FS W WP PV+L + +N P VWDPR DR+H+MPI
Sbjct: 252 PNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPI 311
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYL 384
ITPA+P+QNST NV+ ST T+++ E + I DI GK+ W LFE NFF++Y+H++
Sbjct: 312 ITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKHFI 371
Query: 385 VLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIANGSGSP 444
LI ++ + E++L + G +ES++R L+ +LERN I +AH +P + + +
Sbjct: 372 ALIMAAPNEEEELNYGGFLESRIRLLVQSLERNQDIIIAHNDPNKHKPSP------NAKF 425
Query: 445 EITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKM 504
++ E K ++WFIGL+F L+LT +IQ F V QA+ K
Sbjct: 426 DVNPENKR-------------VTVWFIGLEFAEHAKTLDLTNEIQRFKTNVELQASNVKG 472
Query: 505 MKDGMKIEVR--HVKKKQLSEYLPAHMLKKDKKTK 537
+ ++++ +VK+ L + + A L++ ++ K
Sbjct: 473 IGPNCQVQIDMFYVKRNSLIQVISAADLRRGRRWK 507
>WB|WBGene00011791 [details] [associations]
symbol:T15H9.6 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 1001 (357.4 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 194/415 (46%), Positives = 274/415 (66%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
S P+ +G++ ++ + P D+ T L L+ + E+ +E R++VL L+ LVK
Sbjct: 9 SSTPI-FGVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLVK 67
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
+W+++ +I++ IP GGK+ FGSYRLGVH GADID++ VAPRH+ R+D+F+SF
Sbjct: 68 DWVQKTTISR-IPKDQMFNAGGKLIPFGSYRLGVHSSGADIDSIVVAPRHITRSDFFNSF 126
Query: 143 FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXX 202
+ L EVT+L AVE+AFVP++ + + G++ID+LFARLALK +P
Sbjct: 127 KDILAKNPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNL 186
Query: 203 XQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
++ VRSLNGCRV +++L+LVP+ +NF + LR IKLWAK HGIYSN +G+ GG++WA+LV
Sbjct: 187 DEESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILV 246
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK-----KPDNVNLGFPVWDPRVNVAD 317
ARICQLYPNAA S L+ K F +FS W WP PVLL + D L VWDPR N AD
Sbjct: 247 ARICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHAD 306
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPA+PQQNST NVS S+ ++Q+E K+ I + I+ G W L E NFF
Sbjct: 307 RYHLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLLEEINFF 366
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTD 432
+KY H++ L + S +++L + G ES++R L+ LE+N I +A +NP + D
Sbjct: 367 SKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQILEKNQVIQVAQINPRKFKD 421
Score = 87 (35.7 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 34/118 (28%), Positives = 54/118 (45%)
Query: 467 SMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLP 526
S+WFIGL+F+A ++LT DIQ F + Q+ K + G ++E +K+ + L
Sbjct: 428 SIWFIGLEFVANVKNVDLTSDIQQFKMNIDRQSMSVKEIAAGCQVETDFTYEKRSN--LI 485
Query: 527 AHMLKKD-------KKTKSGDQNTSAKKRKSDQALDELGD-KSRPRLDSDSNSLSDKV 576
+ KKD KKT+ T + LDE + + +LD S D +
Sbjct: 486 NIISKKDLSCQRIMKKTEVSVPVTKDSRNLKRHILDEAPTVQKKHKLDVLEKSTVDSL 543
>UNIPROTKB|Q09995 [details] [associations]
symbol:T15H9.6 "Protein T15H9.6" species:6239
"Caenorhabditis elegans" [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 1001 (357.4 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 194/415 (46%), Positives = 274/415 (66%)
Query: 23 SQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVK 82
S P+ +G++ ++ + P D+ T L L+ + E+ +E R++VL L+ LVK
Sbjct: 9 SSTPI-FGVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLVK 67
Query: 83 EWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSF 142
+W+++ +I++ IP GGK+ FGSYRLGVH GADID++ VAPRH+ R+D+F+SF
Sbjct: 68 DWVQKTTISR-IPKDQMFNAGGKLIPFGSYRLGVHSSGADIDSIVVAPRHITRSDFFNSF 126
Query: 143 FEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXX 202
+ L EVT+L AVE+AFVP++ + + G++ID+LFARLALK +P
Sbjct: 127 KDILAKNPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNL 186
Query: 203 XQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLV 262
++ VRSLNGCRV +++L+LVP+ +NF + LR IKLWAK HGIYSN +G+ GG++WA+LV
Sbjct: 187 DEESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILV 246
Query: 263 ARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLK-----KPDNVNLGFPVWDPRVNVAD 317
ARICQLYPNAA S L+ K F +FS W WP PVLL + D L VWDPR N AD
Sbjct: 247 ARICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHAD 306
Query: 318 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFF 377
RYHLMPIITPA+PQQNST NVS S+ ++Q+E K+ I + I+ G W L E NFF
Sbjct: 307 RYHLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLLEEINFF 366
Query: 378 TKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTD 432
+KY H++ L + S +++L + G ES++R L+ LE+N I +A +NP + D
Sbjct: 367 SKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQILEKNQVIQVAQINPRKFKD 421
Score = 87 (35.7 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 34/118 (28%), Positives = 54/118 (45%)
Query: 467 SMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLP 526
S+WFIGL+F+A ++LT DIQ F + Q+ K + G ++E +K+ + L
Sbjct: 428 SIWFIGLEFVANVKNVDLTSDIQQFKMNIDRQSMSVKEIAAGCQVETDFTYEKRSN--LI 485
Query: 527 AHMLKKD-------KKTKSGDQNTSAKKRKSDQALDELGD-KSRPRLDSDSNSLSDKV 576
+ KKD KKT+ T + LDE + + +LD S D +
Sbjct: 486 NIISKKDLSCQRIMKKTEVSVPVTKDSRNLKRHILDEAPTVQKKHKLDVLEKSTVDSL 543
>TAIR|locus:2134113 [details] [associations]
symbol:nPAP "nuclear poly(a) polymerase" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS] [GO:0031123
"RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002687
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00656923
RefSeq:NP_001031779.1 UniGene:At.25084 ProteinModelPortal:F4JV63
SMR:F4JV63 PRIDE:F4JV63 EnsemblPlants:AT4G32850.8 GeneID:829421
KEGG:ath:AT4G32850 OMA:EDQLEWC PhylomeDB:F4JV63 Uniprot:F4JV63
Length = 765
Score = 986 (352.1 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 192/415 (46%), Positives = 264/415 (63%)
Query: 21 PQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNL 80
P +P +YG+T L+L+ P+ D++R EL + L + E+ ++ R EVL +++ +
Sbjct: 13 PPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQI 72
Query: 81 VKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRA-DYF 139
VK W+K+++ + + E I+TFGSYRLGVH GADID LCV P +V+R D+F
Sbjct: 73 VKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFF 132
Query: 140 SSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXX 199
+ L ++EVT+L V +A VPV+K F GI ID+L+A ++L +P
Sbjct: 133 IILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVL 192
Query: 200 XXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWA 259
+ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YSNV G+LGGV+WA
Sbjct: 193 CEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWA 252
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
+LVAR+CQLYPNA S LV +FF V++QW+WP PV+L + LGFPVWD R N DRY
Sbjct: 253 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRY 312
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYP NS++NVS ST +M E+F+ G I ++I K W LFE FF
Sbjct: 313 HLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEA 372
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVNPECYTDT 433
Y++YL + + AED L W G +ES+ R L +ER+ + + + H P Y DT
Sbjct: 373 YKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDT 427
Score = 60 (26.2 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 22/115 (19%), Positives = 50/115 (43%)
Query: 486 YDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
+DI+ + + K GM + V HV+++QL ++ + ++ ++++ QN
Sbjct: 454 FDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRH--QNLPG 511
Query: 546 KKRKSDQALDELGD--KSRPRLDSDSNSLS---DKVNNISNNGDQSSSECTEDNS 595
K D ++ G + + +DS + +K ++ QS + +NS
Sbjct: 512 GKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENS 566
Score = 43 (20.2 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 23/106 (21%), Positives = 47/106 (44%)
Query: 508 GMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKRKSDQALD----ELGDKSRP 563
G +E RH K+K SE + K +K+ Q+ ++ + + RP
Sbjct: 524 GSVVE-RHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTPPVCNLRRP 582
Query: 564 ---RLDSDS-NSLSDKVNNISNNGDQSSSE-CTEDNSLSQVYGLND 604
+++D+ N+ ++ +++ N S SE E +S++ V +D
Sbjct: 583 PSEEIEADNLNTECTELTDLARNECNSGSEQVLEVDSMAVVQECSD 628
>TAIR|locus:2043560 [details] [associations]
symbol:PAPS2 "poly(A) polymerase 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006351 GO:GO:0003723 EMBL:AC005395
GO:GO:0004652 GO:GO:0043631 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AF255297 EMBL:AY039974 EMBL:AY074533 IPI:IPI00518420
PIR:E84653 RefSeq:NP_565611.1 UniGene:At.14867 SMR:O82312
IntAct:O82312 STRING:O82312 EnsemblPlants:AT2G25850.2 GeneID:817127
KEGG:ath:AT2G25850 TAIR:At2g25850 InParanoid:O82312 OMA:MGSESIN
ProtClustDB:CLSN2688428 BRENDA:2.7.7.19 Genevestigator:O82312
Uniprot:O82312
Length = 800
Score = 979 (349.7 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 193/428 (45%), Positives = 270/428 (63%)
Query: 9 SMQTSKPHQDGKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELS 68
S Q +P + +YG+T L+++ P+ D++R EL + L + E+ EE
Sbjct: 3 STQQRTDDDSSQPVKASLKSYGITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETM 62
Query: 69 SRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCV 128
R EV+ +++ +VK W+K+++ + + E I+TFGSYRLGVH ADID LCV
Sbjct: 63 RREEVVVRIDQIVKHWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCV 122
Query: 129 APRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEI 187
P +V+R D+F F + L ++EVT+L+ V +A VPV+K F GI ID+L+A ++L I
Sbjct: 123 GPSYVNREEDFFIFFRDILAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVI 182
Query: 188 PXXXXXXXXXXXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYS 247
P ++ VRSLNGCRV D+IL+LVPN E+FR LR +K WAKK G+YS
Sbjct: 183 PQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYS 242
Query: 248 NVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFP 307
NV G+LGGV+WA+LVAR+CQ YPNA S LV +FF V++QW+WP PV+L + +L FP
Sbjct: 243 NVTGFLGGVNWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFP 302
Query: 308 VWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMW 367
VWDPR N DRYHLMPIITPAYP NS++NVS ST +M E+F+ G TI ++I K W
Sbjct: 303 VWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHW 362
Query: 368 DKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPH-INLAHVN 426
LF+ FF Y++YL + + AED L W G +ES+ R L +ER+ + + + H
Sbjct: 363 SSLFQQYMFFEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQ 422
Query: 427 PECYTDTT 434
P Y DT+
Sbjct: 423 PNEYVDTS 430
Score = 67 (28.6 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 20/106 (18%), Positives = 45/106 (42%)
Query: 486 YDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSA 545
+DI+ + + + GM + V HV+++QL ++ + K+ ++++ Q
Sbjct: 456 FDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQSQQC-- 513
Query: 546 KKRKSDQALDELGDKSRPRLDSDSNSLSDKVNNISNNGDQSSSECT 591
+ D+ + L D S R N D++ N + + C+
Sbjct: 514 -REPGDEGVGSLSD-SVERYAKRKND--DEIMNSRPEKREKRASCS 555
>TAIR|locus:2030943 [details] [associations]
symbol:PAPS1 "poly(A) polymerase 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006351 EMBL:AC034106
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
UniGene:At.26787 UniGene:At.73166 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500 BRENDA:2.7.7.19
EMBL:BT005990 EMBL:AY323906 EMBL:AK227446 IPI:IPI00540119
PIR:B86315 RefSeq:NP_173240.2 ProteinModelPortal:Q9LMT2 SMR:Q9LMT2
IntAct:Q9LMT2 STRING:Q9LMT2 PaxDb:Q9LMT2 PRIDE:Q9LMT2
EnsemblPlants:AT1G17980.1 GeneID:838378 KEGG:ath:AT1G17980
TAIR:At1g17980 InParanoid:Q9LMT2 OMA:WDTLFEP PhylomeDB:Q9LMT2
ProtClustDB:CLSN2680711 Genevestigator:Q9LMT2 Uniprot:Q9LMT2
Length = 713
Score = 986 (352.1 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 190/407 (46%), Positives = 262/407 (64%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G++ +++ P + D+ +TREL + L+ + E+ EE R EVL L+ +VK WIK +
Sbjct: 11 FGVSEPISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIKTI 70
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDR-ADYFSSFFEKLK 147
S AK + + + KI+TFGSYRLGVH GADID LCV PRH R D+F L
Sbjct: 71 SRAKGLNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLS 130
Query: 148 TVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCV 207
+ EVT+L V +A VP++ +G+ ID+L+A+L L IP ++ V
Sbjct: 131 EMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADEQTV 190
Query: 208 RSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQ 267
RSLNGCRVTD+ILRLVPNI+NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVARICQ
Sbjct: 191 RSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQ 250
Query: 268 LYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITP 327
LYPNA + LV +FF VF QW WP + L PD +LG VWDPR+N DR H+MPIITP
Sbjct: 251 LYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITP 310
Query: 328 AYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLI 387
AYP NS++NVS ST IM+ EF++G I E + + K WD LFE FF Y++YL +
Sbjct: 311 AYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQID 370
Query: 388 ASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTT 434
S+ + +D +W G +ES++R L +ER+ + H +P + DT+
Sbjct: 371 ISAANVDDLRKWKGWVESRLRQLTLKIERHFKMLHCHPHPHDFQDTS 417
Score = 58 (25.5 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 15/68 (22%), Positives = 31/68 (45%)
Query: 508 GMKIEVRHVKKKQLSEYL-PAHMLKKDKKTKSGDQNTSAKKRKSDQALDELGDKSRPRLD 566
GM+I V H+K++ L ++ P + + D N ++ R S + + +
Sbjct: 464 GMEISVGHIKRRSLPNFVFPGGVRPSHTSKGTWDSNRRSEHRNSSTSSAPAATTTTTEMS 523
Query: 567 SDSNSLSD 574
S+S + S+
Sbjct: 524 SESKAGSN 531
Score = 40 (19.1 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 568 DSNSLSDKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
DSN S+ N+ +++ +++ TE +S S+ G N V
Sbjct: 497 DSNRRSEHRNSSTSSAPAATTTTTEMSSESKA-GSNSPV 534
>POMBASE|SPBC646.04 [details] [associations]
symbol:pla1 "poly(A) polymerase Pla1" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IGI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IGI] [GO:0006378 "mRNA polyadenylation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 PomBase:SPBC646.04 GO:GO:0005829
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0005847
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 OMA:FPGGVAW EMBL:X79705
EMBL:AB027883 PIR:JC6058 RefSeq:NP_595362.1
ProteinModelPortal:Q10295 SMR:Q10295 MINT:MINT-2730388
STRING:Q10295 EnsemblFungi:SPBC646.04.1 GeneID:2541099
KEGG:spo:SPBC646.04 OrthoDB:EOG4SR150 NextBio:20802212
Uniprot:Q10295
Length = 566
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 178/396 (44%), Positives = 261/396 (65%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ +P + + L LK N+ E+ E R++VL +L + E++K+V
Sbjct: 6 WGITPPISTAPATEQENALNTALINELKNQNLFESPAESEKRVKVLDELQQITTEFVKKV 65
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S+AK++ +A + GGKI+T+GSYRLGV+ G+DID L V P+HV R ++F L+
Sbjct: 66 SLAKHMNEKMANEAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSRDNFFQDLEPMLRE 125
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVR 208
+EVTDL AV +A+VP+IK F GI ID++FARL++ +P ++CV
Sbjct: 126 REEVTDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEERCVL 185
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RVTD+IL+LVPN F+ ALR IK WA++ IY+NV+G+ GGV+WAM+VARICQL
Sbjct: 186 SLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARICQL 245
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA +S +V KFF + QW WPQP+LLK ++ L +W+P++ +D+ H MPIITPA
Sbjct: 246 YPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPA 305
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N+++ST+TI+ E + I++ I W LF+ +FF +Y+HYL + A
Sbjct: 306 YPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHYLTITA 365
Query: 389 SSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
++ +AE QL+W GL+ESK+RHL+ LE I LAH
Sbjct: 366 AAKTAEAQLKWAGLVESKLRHLVTRLELVDAIALAH 401
>SGD|S000001710 [details] [associations]
symbol:PAP1 "Poly(A) polymerase, one of three factors
required for mRNA 3'-end pol" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IDA;IMP] [GO:0005654 "nucleoplasm" evidence=IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071050 "snoRNA polyadenylation"
evidence=IGI] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 SGD:S000001710 GO:GO:0005524
GO:GO:0000287 GO:GO:0006378 GO:GO:0006351 EMBL:BK006944
GO:GO:0003723 GO:GO:0005847 GO:GO:0004652 EMBL:X65124
RefSeq:NP_012929.4 GeneID:853873 KEGG:sce:YKR004C PDB:3C66
PDBsum:3C66 RefSeq:NP_012927.3 GeneID:853871 KEGG:sce:YKR002W
KO:K14376 GO:GO:0071050 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
OMA:FPGGVAW OrthoDB:EOG4SR150 EMBL:X60307 EMBL:Z28227 PIR:S19031
PDB:1FA0 PDB:2HHP PDB:2O1P PDB:2Q66 PDBsum:1FA0 PDBsum:2HHP
PDBsum:2O1P PDBsum:2Q66 ProteinModelPortal:P29468 SMR:P29468
DIP:DIP-2297N IntAct:P29468 MINT:MINT-375429 STRING:P29468
PaxDb:P29468 PeptideAtlas:P29468 EnsemblFungi:YKR002W CYGD:YKR002w
EvolutionaryTrace:P29468 NextBio:975142 Genevestigator:P29468
GermOnline:YKR002W Uniprot:P29468
Length = 568
Score = 892 (319.1 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 172/397 (43%), Positives = 256/397 (64%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
+G+T ++ + + L + LK ET++E ++R++VL L L + ++ EV
Sbjct: 7 FGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEV 66
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S KN+ +A GGKI+T+GSYRLGVH G+DID L V P+HV R D+F+ F L+
Sbjct: 67 SKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSLLRE 126
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVR 208
E+ ++ V +AFVP+IK+ F GI ID++ ARL ++P +K +R
Sbjct: 127 RKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLR 186
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
+LNG RVTDEIL LVP FR+ALR IKLWA++ +Y+N+ G+ GGV+WAMLVARICQL
Sbjct: 187 ALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQL 246
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ ++ +FF++ S+W WPQPV+LK ++ L VW+P++ DR H MP+ITPA
Sbjct: 247 YPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPA 306
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N++ ST+ ++ +EF +G I+ DI++ K W LFE +FF +Y+ YL + A
Sbjct: 307 YPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITA 366
Query: 389 SSVSAEDQ-LEWCGLIESKVRHLIGNLERNPHINLAH 424
+ +++Q L+W GL+ESKVR L+ LE I +AH
Sbjct: 367 YTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAH 403
Score = 51 (23.0 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 30/114 (26%), Positives = 48/114 (42%)
Query: 446 ITAEGKEEGGENTSPPVSGVASMWFIGLDFIAANVILNLTYDIQHFTNAVHWQATQSKMM 505
+T E KEE +P S +IGLDF N + I T V+ + ++
Sbjct: 443 VTDENKEEESIKDAP--KAYLSTMYIGLDFNIENKKEKVDIHIP-CTEFVNLCRSFNEDY 499
Query: 506 KDG--MKIEVRHVKKKQL-SEYLPAHMLKKDKKTKSGD---QNTSAKKRKSDQA 553
D + +R VK L E + + KK+K + ++ + K+ KSD A
Sbjct: 500 GDHKVFNLALRFVKGYDLPDEVFDENEKRPSKKSKRKNLDARHETVKRSKSDAA 553
>CGD|CAL0002451 [details] [associations]
symbol:PAP1 species:5476 "Candida albicans" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=IDA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IEA] [GO:0071050 "snoRNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 CGD:CAL0002451 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AACQ01000100 GO:GO:0044011 GO:GO:0004652
KO:K14376 EMBL:AF167162 EMBL:AB021667 RefSeq:XP_714613.1
ProteinModelPortal:Q9UW26 STRING:Q9UW26 GeneID:3643763
KEGG:cal:CaO19.3197 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 177/397 (44%), Positives = 258/397 (64%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++++ + + L + LK E++ R+EVL+ L ++ +E++ +V
Sbjct: 6 YGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEFVYKV 65
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
SI KNI +A VGGKI+TFGSYRLGV+ G+DID L V P+HV R D+F F+E LK
Sbjct: 66 SIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRNDFFEVFYELLKG 125
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVR 208
E+ ++ V +AFVP+IK+ F GI ID++FARL + +P +K +R
Sbjct: 126 RSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDLR 185
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
+LNG RVTDEIL+LVP F+ ALR IK+WA++ +Y N+ G+ GGV+WAMLVARICQL
Sbjct: 186 ALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQL 245
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ +V KFF ++SQW WPQPVLLK+ ++ L VW+PR+ DR H MP+ITPA
Sbjct: 246 YPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPA 305
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N++ ST+ ++ EF++G + DI GK W L E +FF +Y+ YL ++A
Sbjct: 306 YPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLCIVA 365
Query: 389 SSVSA-EDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
++ S + L++ G++ESK+R L+ LE I LAH
Sbjct: 366 ATRSTYAEHLKYSGMVESKLRLLVQKLELVEGIELAH 402
>UNIPROTKB|Q9UW26 [details] [associations]
symbol:PAPA "Poly(A) polymerase PAPa" species:237561
"Candida albicans SC5314" [GO:0003723 "RNA binding" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0006378 "mRNA polyadenylation" evidence=IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
CGD:CAL0002451 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 EMBL:AACQ01000100
GO:GO:0044011 GO:GO:0004652 KO:K14376 EMBL:AF167162 EMBL:AB021667
RefSeq:XP_714613.1 ProteinModelPortal:Q9UW26 STRING:Q9UW26
GeneID:3643763 KEGG:cal:CaO19.3197 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 177/397 (44%), Positives = 258/397 (64%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T ++++ + + L + LK E++ R+EVL+ L ++ +E++ +V
Sbjct: 6 YGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEFVYKV 65
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
SI KNI +A VGGKI+TFGSYRLGV+ G+DID L V P+HV R D+F F+E LK
Sbjct: 66 SIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRNDFFEVFYELLKG 125
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVR 208
E+ ++ V +AFVP+IK+ F GI ID++FARL + +P +K +R
Sbjct: 126 RSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDLR 185
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
+LNG RVTDEIL+LVP F+ ALR IK+WA++ +Y N+ G+ GGV+WAMLVARICQL
Sbjct: 186 ALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQL 245
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPA 328
YPNA ++ +V KFF ++SQW WPQPVLLK+ ++ L VW+PR+ DR H MP+ITPA
Sbjct: 246 YPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPA 305
Query: 329 YPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIA 388
YP +T N++ ST+ ++ EF++G + DI GK W L E +FF +Y+ YL ++A
Sbjct: 306 YPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLCIVA 365
Query: 389 SSVSA-EDQLEWCGLIESKVRHLIGNLERNPHINLAH 424
++ S + L++ G++ESK+R L+ LE I LAH
Sbjct: 366 ATRSTYAEHLKYSGMVESKLRLLVQKLELVEGIELAH 402
>UNIPROTKB|F8WAT4 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
EMBL:AC012498 IPI:IPI00893537 ProteinModelPortal:F8WAT4 SMR:F8WAT4
Ensembl:ENST00000414060 ArrayExpress:F8WAT4 Bgee:F8WAT4
Uniprot:F8WAT4
Length = 234
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 162/234 (69%), Positives = 189/234 (80%)
Query: 55 LKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRL 114
+KP+ V E +EEL+ R+ VL KLNNLVKEWI +VS +KN+PP+V VGGKI+TFGSYRL
Sbjct: 1 MKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRL 60
Query: 115 GVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIE 174
GVH KGADIDALCVAPRHV+R+D+F SFFEKLK D + +LRAVE+AFVPVIK FDGIE
Sbjct: 61 GVHTKGADIDALCVAPRHVERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIE 120
Query: 175 IDMLFARLALKEIPXXXXXXXXXXXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALR 234
ID++FARLA++ I +C+RSLNGCRVTDEIL LVPN E FRL LR
Sbjct: 121 IDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLR 180
Query: 235 TIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQW 288
+KLWAK+ GIYSN+LG+LGGVSWAMLVAR CQLYPNAAASTLV KFFLVFS+W
Sbjct: 181 AVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKW 234
>UNIPROTKB|G3V2A0 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
Pfam:PF04926 Pfam:PF04928 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 EMBL:AL163051 Gene3D:3.30.70.590
SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3V2A0 SMR:G3V2A0 Ensembl:ENST00000555626
ArrayExpress:G3V2A0 Bgee:G3V2A0 Uniprot:G3V2A0
Length = 475
Score = 650 (233.9 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
Identities = 116/171 (67%), Positives = 141/171 (82%)
Query: 260 MLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRY 319
MLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRY
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 320 HLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTK 379
HLMPIITPAYPQQNST+NVS+STR +M EEFKQG I+++I K W KLFE PNFF K
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECY 430
Y+HY+VL+AS+ + + +LEW GL+ESK+R L+G+LE+N I LAHVNP+ +
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 171
Score = 183 (69.5 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
Identities = 52/153 (33%), Positives = 79/153 (51%)
Query: 459 SPPVSGVASMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVR 514
+P +MW IGL F + N+ ++LTYDIQ FT+ V+ QA SKM + MKI
Sbjct: 177 NPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 236
Query: 515 HVKKKQLSEYLPAHMLKKDKK-TKSGDQNTSAKKRKSDQALDELGDKSRPRLDSDSNSLS 573
HVK+KQL + LP H+L+K KK + G + T+ D ++D S P S + + S
Sbjct: 237 HVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKT-S 295
Query: 574 DKVNNISNNGDQSSSECTEDNSLSQVYGLNDSV 606
++ S+ G S + S++ + SV
Sbjct: 296 PLNSSGSSQGRNSPAPAVTAASVTNIQATEVSV 328
Score = 43 (20.2 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 17/73 (23%), Positives = 30/73 (41%)
Query: 528 HMLKKDKKTKSGDQNTSAKKRKSDQALDELG-DKSRPRLDSDSNSLSDKVNNISNNGDQS 586
H + KKTK+ + TS + L G DK+ + D+ + + + I
Sbjct: 406 HKEESPKKTKTEEDETS----EDANCLALSGHDKTEAKEQLDTETSTTQSETIQTAASLL 461
Query: 587 SSECTEDNSLSQV 599
+S+ T LS +
Sbjct: 462 ASQKTSSTDLSDI 474
>GENEDB_PFALCIPARUM|PFF1240w [details] [associations]
symbol:PFF1240w "poly(A) polymerase PAP,
putative" species:5833 "Plasmodium falciparum" [GO:0006378 "mRNA
polyadenylation" evidence=ISS] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 193/544 (35%), Positives = 284/544 (52%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++L+ P++ D++R+ ++ E LK YN+ E + L R VL +N L E++ E+S
Sbjct: 83 GVTEPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKLFHEFLIELS 142
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
I + I A + G +YTFGSYRLGV +DID + +AP+++ R +F+ F+ KL+
Sbjct: 143 INQGISEEEANNISGNLYTFGSYRLGVITPNSDIDCIFLAPQNLTREIFFNEFYLKLQQD 202
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKC-VR 208
V L+A+ E + P+I+ +D ++ID+L A L K + + VR
Sbjct: 203 RNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTVR 262
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RV D IL VPN + FR LR IKLWAK GIYSN+LG+LGG+SWA+L A+ICQL
Sbjct: 263 SLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQL 322
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNL----GFPVWDPRVNVADRYHLMPI 324
YPN S L+CKFF V+S W W PVLL+ N+ FPVWDP N+ D+ H+MPI
Sbjct: 323 YPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPI 382
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTI---SEDIYNGKTM--WDKLFETPNFFTK 379
ITPA+P NST NV+ TR I+ EEFK+ +I ED N K+ +KL+ N
Sbjct: 383 ITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYMEDENNIKSSIRMNKLWPNNN---- 438
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIAN 439
++++ W ++E L + HI + +N Y G I +
Sbjct: 439 --------VNNINNSSNNVWMTILEPL--DLFSTYKHFLHIQIMGINEFIYNSWKGWIES 488
Query: 440 GSGSPEITAEGKEEGGENTSPPV-------SGVASMWFIGLDFIAANVI---LNLTYDIQ 489
E E P S S +FI L F N NL+Y I+
Sbjct: 489 KIRLLFKKLETINELKIRPFPKFYFYKKEKSYYCSSFFIALIFFYKNPYENTFNLSYAIR 548
Query: 490 HFTN-AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKR 548
F + A++W Q + KI + + K+ Q+ E+L ++++K K +N +
Sbjct: 549 DFIDIALNWP--QKVKYPNAFKINIMYQKRSQVLEFLDIVTKEENQKNKQVMENNDKDET 606
Query: 549 KSDQ 552
+Q
Sbjct: 607 NHNQ 610
>UNIPROTKB|C6KT92 [details] [associations]
symbol:PFF1240w "Poly(A) polymerase PAP, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=ISS;IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 193/544 (35%), Positives = 284/544 (52%)
Query: 30 GMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEVS 89
G+T ++L+ P++ D++R+ ++ E LK YN+ E + L R VL +N L E++ E+S
Sbjct: 83 GVTEPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKLFHEFLIELS 142
Query: 90 IAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKTV 149
I + I A + G +YTFGSYRLGV +DID + +AP+++ R +F+ F+ KL+
Sbjct: 143 INQGISEEEANNISGNLYTFGSYRLGVITPNSDIDCIFLAPQNLTREIFFNEFYLKLQQD 202
Query: 150 DEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLALKEIPXXXXXXXXXXXXXXXQKC-VR 208
V L+A+ E + P+I+ +D ++ID+L A L K + + VR
Sbjct: 203 RNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTVR 262
Query: 209 SLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL 268
SLNG RV D IL VPN + FR LR IKLWAK GIYSN+LG+LGG+SWA+L A+ICQL
Sbjct: 263 SLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQL 322
Query: 269 YPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNL----GFPVWDPRVNVADRYHLMPI 324
YPN S L+CKFF V+S W W PVLL+ N+ FPVWDP N+ D+ H+MPI
Sbjct: 323 YPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPI 382
Query: 325 ITPAYPQQNSTFNVSISTRTIMQEEFKQGKTI---SEDIYNGKTM--WDKLFETPNFFTK 379
ITPA+P NST NV+ TR I+ EEFK+ +I ED N K+ +KL+ N
Sbjct: 383 ITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYMEDENNIKSSIRMNKLWPNNN---- 438
Query: 380 YRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLAHVNPECYTDTTGVIAN 439
++++ W ++E L + HI + +N Y G I +
Sbjct: 439 --------VNNINNSSNNVWMTILEPL--DLFSTYKHFLHIQIMGINEFIYNSWKGWIES 488
Query: 440 GSGSPEITAEGKEEGGENTSPPV-------SGVASMWFIGLDFIAANVI---LNLTYDIQ 489
E E P S S +FI L F N NL+Y I+
Sbjct: 489 KIRLLFKKLETINELKIRPFPKFYFYKKEKSYYCSSFFIALIFFYKNPYENTFNLSYAIR 548
Query: 490 HFTN-AVHWQATQSKMMKDGMKIEVRHVKKKQLSEYLPAHMLKKDKKTKSGDQNTSAKKR 548
F + A++W Q + KI + + K+ Q+ E+L ++++K K +N +
Sbjct: 549 DFIDIALNWP--QKVKYPNAFKINIMYQKRSQVLEFLDIVTKEENQKNKQVMENNDKDET 606
Query: 549 KSDQ 552
+Q
Sbjct: 607 NHNQ 610
>UNIPROTKB|H0YJ00 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
Ensembl:ENST00000553461 Uniprot:H0YJ00
Length = 203
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 141/202 (69%), Positives = 163/202 (80%)
Query: 125 ALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLAL 184
ALCVAPRHVDR+D+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDGIEID+LFARLAL
Sbjct: 2 ALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLAL 61
Query: 185 KEIPXXXXXXXXXXXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKHG 244
+ IP +C+RSLNGCRVTDEIL LVPNI+NFRL LR IKLWAK+H
Sbjct: 62 QTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHN 121
Query: 245 IYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVNL 304
IYSN+LG+LGGVSWAMLVAR CQLYPNA ASTLV KFFLVFS+W+WP PVLLK+P+ NL
Sbjct: 122 IYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNL 181
Query: 305 GFPVWDPRVNVADRYHLMPIIT 326
PVWDPRV+V + +PI T
Sbjct: 182 NLPVWDPRVSVL--FFPLPIHT 201
>TAIR|locus:2084274 [details] [associations]
symbol:PAPS3 "poly(A) polymerase 3" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=RCA] InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 EMBL:AK221644 IPI:IPI00518099 RefSeq:NP_187308.3
UniGene:At.40500 ProteinModelPortal:Q56XM9 SMR:Q56XM9 IntAct:Q56XM9
STRING:Q56XM9 EnsemblPlants:AT3G06560.1 GeneID:819835
KEGG:ath:AT3G06560 TAIR:At3g06560 HOGENOM:HOG000006246
InParanoid:Q56XM9 OMA:IDETSWK PhylomeDB:Q56XM9
ProtClustDB:CLSN2699159 Genevestigator:Q56XM9 Uniprot:Q56XM9
Length = 507
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 122/370 (32%), Positives = 189/370 (51%)
Query: 65 EELSSRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADID 124
E+ R V+++L +V W+K V+ +P + I +GSY LGV+ +DID
Sbjct: 35 EDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGLGVYGSESDID 94
Query: 125 ALCVAPRHVDRA-DYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLA 183
ALC+ P A D+F S + LK+ EV++L V++A VP+I+ FDGI +D+ +A+L
Sbjct: 95 ALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGILVDLPYAQLR 154
Query: 184 LKEIPXXXXXXXXXXXXXXXQKCVRSLNGCRVTDEILRLVPNIENFRLALRTIKLWAKKH 243
+ IP + + L+G R IL+LVP++E F+ LR +KLWAK+
Sbjct: 155 VLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLLRCVKLWAKRR 214
Query: 244 GIYSNVLGYLGGVSWAMLVARICQLYPNAAASTLVCKFFLVFSQWKWPQPVLLKKPDNVN 303
G+Y N+ G+LGGV A+L A +C PNA S+L+ FF F+ W+WP PV+L + +
Sbjct: 215 GVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPVVLLEDTYPS 274
Query: 304 LGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSISTRTIMQEEFKQGKTISEDIYNG 363
G P P LMPI P Q ++ ST + EF G +++D
Sbjct: 275 TGAP---PG--------LMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLKL 323
Query: 364 KTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGLIESKVRHLIGNLERNPHINLA 423
W LFE + Y + + S+ + ED +W G ++S+ R L+ +E +
Sbjct: 324 NFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIEEV--YGIC 381
Query: 424 HVNPECYTDT 433
NP Y +T
Sbjct: 382 DPNPTEYVET 391
>UNIPROTKB|H7C3W0 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
EMBL:AC012498 ProteinModelPortal:H7C3W0 Ensembl:ENST00000453839
Bgee:H7C3W0 Uniprot:H7C3W0
Length = 168
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 94/156 (60%), Positives = 123/156 (78%)
Query: 29 YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLNNLVKEWIKEV 88
YG+T+ ++L+ P ++D T++L + +KP+ V E +EEL+ R+ VL KLNNLVKEWI +V
Sbjct: 13 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 72
Query: 89 SIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLKT 148
S +KN+PP+V VGGKI+TFGSYRLGVH KGADIDALCVAPRHV+R+D+F SFFEKLK
Sbjct: 73 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 132
Query: 149 VDEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLAL 184
D + +LRAVE+AFVPVIK FDGIE+ L + +
Sbjct: 133 QDGIRNLRAVEDAFVPVIKFEFDGIEVVELLMKFCI 168
>UNIPROTKB|Q59G05 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma variant"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR011068 Pfam:PF04926 GO:GO:0005634 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
RefSeq:NP_075045.2 UniGene:Hs.387471 GeneID:64895 KEGG:hsa:64895
CTD:64895 HGNC:HGNC:14982 GenomeRNAi:64895 NextBio:67037
EMBL:AC011245 EMBL:AC012498 EMBL:AB209304 IPI:IPI00555821
ProteinModelPortal:Q59G05 SMR:Q59G05 STRING:Q59G05 PRIDE:Q59G05
Ensembl:ENST00000412217 ArrayExpress:Q59G05 Bgee:Q59G05
Uniprot:Q59G05
Length = 382
Score = 297 (109.6 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 53/88 (60%), Positives = 68/88 (77%)
Query: 343 RTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGL 402
RT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL AS+ + E+ LEW GL
Sbjct: 1 RTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60
Query: 403 IESKVRHLIGNLERNPHINLAHVNPECY 430
+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 61 VESKIRVLVGNLERNEFITLAHVNPQSF 88
Score = 221 (82.9 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 59/135 (43%), Positives = 80/135 (59%)
Query: 467 SMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLS 522
SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M+K+GMKIE HVKKKQL
Sbjct: 102 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLH 161
Query: 523 EYLPAHMLKKDKKTKSGDQNTSAKKRKSDQ-ALDELG-DKSRPRLDSDSNSLSDKVNNIS 580
YLPA +L+K KK D N S+ +S + +LD D SR D+D+ + N+ +
Sbjct: 162 HYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSR---DTDNGT---PFNSPA 215
Query: 581 NNGDQSSSECTEDNS 595
+ D S TE NS
Sbjct: 216 SKSDSPSVGETERNS 230
>UNIPROTKB|G3V3I9 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 EMBL:AL163051 HGNC:HGNC:14981
ChiTaRS:PAPOLA ProteinModelPortal:G3V3I9 SMR:G3V3I9
Ensembl:ENST00000556619 ArrayExpress:G3V3I9 Bgee:G3V3I9
Uniprot:G3V3I9
Length = 177
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 98/169 (57%), Positives = 125/169 (73%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELS--------- 68
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRSNDLEYLI 68
Query: 69 -----SRMEVLSKLNNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHKGADI 123
+R+ +L KLNNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH KGADI
Sbjct: 69 DNCFINRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADI 128
Query: 124 DALCVAPRHVDRADYFSSFFEKLKTVDEVTDLRAVEEAFVPVIKMNFDG 172
DALCVAPRHVDR+D+F+SF++KLK +EV DLRAVEEAFVPVIK+ FDG
Sbjct: 129 DALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDG 177
>UNIPROTKB|F1PYB9 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR007010 InterPro:IPR011068
Pfam:PF04926 GO:GO:0005634 GO:GO:0006378 GO:GO:0003723
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:AAEX03007549
Ensembl:ENSCAFT00000004771 Uniprot:F1PYB9
Length = 384
Score = 297 (109.6 bits), Expect = 2.5e-45, Sum P(2) = 2.5e-45
Identities = 53/88 (60%), Positives = 68/88 (77%)
Query: 343 RTIMQEEFKQGKTISEDIYNGKTMWDKLFETPNFFTKYRHYLVLIASSVSAEDQLEWCGL 402
RT+M EEFKQG ++++I GK+ W KL E PNFF KYRHY+VL AS+ + E+ LEW GL
Sbjct: 1 RTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60
Query: 403 IESKVRHLIGNLERNPHINLAHVNPECY 430
+ESK+R L+GNLERN I LAHVNP+ +
Sbjct: 61 VESKIRVLVGNLERNEFITLAHVNPQSF 88
Score = 211 (79.3 bits), Expect = 2.5e-45, Sum P(2) = 2.5e-45
Identities = 58/137 (42%), Positives = 81/137 (59%)
Query: 467 SMWFIGLDFI----AANVILNLTYDIQHFTNAVHWQATQSKMMKDGMKIEVRHVKKKQLS 522
SMWF+G+ F A +V ++LTYDIQ FT+ V+ QA M+K+GMKIE HVKKKQL
Sbjct: 102 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLH 161
Query: 523 EYLPAHMLKKDKKTKSGDQNTSAKKRKSDQA-LDE-LGDKSRPRLDSDSNS-LSDKVN-N 578
YLPA +L+K KK D + S+ +S ++ LD D SR D+D+ + + V+ N
Sbjct: 162 HYLPAEILQKKKKQSLSDVSRSSSGPQSKRSSLDSNCLDSSR---DTDNGTPFNSPVSIN 218
Query: 579 ISNNGDQSSSECTEDNS 595
+ D S TE N+
Sbjct: 219 KPSKPDLPPSGETERNN 235
>UNIPROTKB|F1NDP2 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351
GO:GO:0004652 GeneTree:ENSGT00390000017928 EMBL:AADN02003685
IPI:IPI00582545 Ensembl:ENSGALT00000018088 ArrayExpress:F1NDP2
Uniprot:F1NDP2
Length = 109
Score = 289 (106.8 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 55/101 (54%), Positives = 72/101 (71%)
Query: 19 GKPQSQAPVTYGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKLN 78
G Q YG+T+ ++L+ P + D T++L E LKPY V E +EEL R+ +L KLN
Sbjct: 9 GSQTQQLQKHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLN 68
Query: 79 NLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHK 119
NLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH K
Sbjct: 69 NLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTK 109
>UNIPROTKB|G3V457 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3V457 SMR:G3V457 Ensembl:ENST00000553689
ArrayExpress:G3V457 Bgee:G3V457 Uniprot:G3V457
Length = 111
Score = 289 (106.8 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 56/102 (54%), Positives = 75/102 (73%)
Query: 19 GKPQSQAPVT-YGMTTALNLSPPNQLDLQRTRELAECLKPYNVSETDEELSSRMEVLSKL 77
G Q+Q P YG+T+ ++L+ P + D T++L E LKP+ V E +EEL R+ +L KL
Sbjct: 9 GSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKL 68
Query: 78 NNLVKEWIKEVSIAKNIPPTVAEKVGGKIYTFGSYRLGVHHK 119
NNLVKEWI+E+S +KN+P +V E VGGKI+TFGSYRLGVH K
Sbjct: 69 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTK 110
>UNIPROTKB|G4N5I8 [details] [associations]
symbol:MGG_06121 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR009097 InterPro:IPR011068 Pfam:PF04926 Pfam:PF04928
Pfam:PF03372 GO:GO:0005634 EMBL:CM001233 GO:GO:0006351
GO:GO:0003723 SUPFAM:SSF55144 InterPro:IPR005135 SUPFAM:SSF56219
GO:GO:0004652 GO:GO:0043631 SUPFAM:SSF55003 RefSeq:XP_003711988.1
ProteinModelPortal:G4N5I8 EnsemblFungi:MGG_06121T0 GeneID:2684277
KEGG:mgr:MGG_06121 InterPro:IPR007547 Pfam:PF04457 Uniprot:G4N5I8
Length = 1238
Score = 219 (82.2 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 88/376 (23%), Positives = 170/376 (45%)
Query: 110 GSYRLGVHHKGADIDALCVAPRHVDRADYFSSFFEKLK--TVD---EVTDLRAVEEAFVP 164
GS+ LGV +DID LC+ P + + +F+ +++K +V+ E+ LR V
Sbjct: 668 GSWGLGVSTLSSDIDCLCIGP--LSSSTFFALTTQRIKKASVESGLEIKLLRRVRANSGV 725
Query: 165 VIKMNFDGIEIDMLF-ARLALKEI-PXXXXXXXXXXXXXXXQKCVRSLNGCRVTDEILRL 222
++++ + +D+ + A A+ E P + + L R D +
Sbjct: 726 MLELEVMSVRVDLQYCAATAVAEQWPAVLKLPPNDPIFALPAQTLGKLKALRDLDYLRET 785
Query: 223 VPNIENFRLALRTIKLWAKKHGIYSNVLGYLGGVSWAMLVARICQL----Y-PNAAASTL 277
+P++ FRLA R IK WA+ GIYS GYLGG+ ++L+AR+C+L Y + +
Sbjct: 786 IPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLARVCKLLARDYGQEVSVPDI 845
Query: 278 VCKFFLVFSQWKWPQPVLLKKPDNVNLGFPVWDPRVNVADRYHLMPIITPAYPQQNSTFN 337
+ FF ++ + W + + L + + R +A ++ PA N+T
Sbjct: 846 LSSFFSHYASFDWRNKIAFDPFFHKKLNY-LRSAREPLA----ILGFFPPAL---NTTLA 897
Query: 338 VSI-STRTIMQEEFKQGKTISEDIYNGKTMWDKLF--------ET-------PNFFTKYR 381
++ S + I +E + + ++ED G T WD F +T +F + Y+
Sbjct: 898 ATVPSMKAIARELSQANELLNED---GMT-WDTFFGASSAGGDKTHSLARGAADFLSSYK 953
Query: 382 HYLVLIAS--SVSAEDQLEWCGLIESKVRHLIGNLERN-PHINLAHVNPECYTDTTGVIA 438
++ + +S ++ G +ES+ L+ ++ R P +N + P+ + +
Sbjct: 954 SFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSRRLPQLNF-RIWPQRFVEQVD--- 1009
Query: 439 NGSGSPEITAEGKEEG 454
+G PE + +G ++G
Sbjct: 1010 --AGEPEASNDGDDQG 1023
Score = 39 (18.8 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 23 SQAPVTYGMTTALNLSPPNQL--DLQRTREL 51
S A T TAL + PP QL + R R L
Sbjct: 12 SHAIPTTSHDTALCIVPPRQLWPTIDRLRSL 42
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 654 610 0.00087 120 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 624 (66 KB)
Total size of DFA: 359 KB (2179 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 62.92u 0.08s 63.00t Elapsed: 00:00:44
Total cpu time: 62.93u 0.09s 63.02t Elapsed: 00:00:46
Start: Thu Aug 15 14:33:16 2013 End: Thu Aug 15 14:34:02 2013