BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18160
(373 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357627683|gb|EHJ77299.1| small GTP binding protein RAB5 [Danaus plexippus]
Length = 209
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 142/186 (76%), Gaps = 25/186 (13%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+CLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTFGRAK+WVKE LQR A P+IVIALAGNK+DL ++R
Sbjct: 105 QDTFGRAKNWVKE---------------------LQRQASPSIVIALAGNKSDL-AAKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
VE+ E +AYA+ENGLLFMETSAKTAMNVN+IF+ IA KLPK EV++G G R++ A+AP
Sbjct: 143 VEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPKSEVSSGGAGTRVLNDADAP 202
Query: 246 KTSNCC 251
++S+CC
Sbjct: 203 RSSSCC 208
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 285 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
QRPN Q K+CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 QRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|189237939|ref|XP_001813105.1| PREDICTED: similar to small GTP binding protein RAB5 [Tribolium
castaneum]
gi|270008253|gb|EFA04701.1| Rab-protein 5 [Tribolium castaneum]
Length = 215
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 120/191 (62%), Positives = 135/191 (70%), Gaps = 30/191 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTFGRAK+WVKELQ R A PNIVIALAGNK DL ++R
Sbjct: 106 QDTFGRAKTWVKELQ---------------------RQASPNIVIALAGNKQDLA-NKRM 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG----GRRLVET 241
VE+ E + YA+ENGLLFMETSAKTAMNVN+IF+ IAKKLPK E QG GRRL E
Sbjct: 144 VEFEEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQATAQGASGQGRRLAEG 203
Query: 242 AEAPKTS-NCC 251
K + NCC
Sbjct: 204 DTGAKAAGNCC 214
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 46/52 (88%)
Query: 280 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
R G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 4 RTGTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 55
>gi|307203579|gb|EFN82612.1| Ras-related protein Rab-5C [Harpegnathos saltator]
Length = 214
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 140/192 (72%), Gaps = 32/192 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTF RA++WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QDTFSRAQTWVKE---------------------LQRQASPSIVIALAGNKADLA-NKRV 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-----NGQGGRRLVE 240
VEY E + YA+ENGLLFMETSAKTAMNVN+IF+ IAKKLPK E + +GQ GRRLVE
Sbjct: 143 VEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQSGNASTSGQ-GRRLVE 201
Query: 241 T-AEAPKTSNCC 251
+ + TSNCC
Sbjct: 202 SDGQKAATSNCC 213
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 45/51 (88%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|427786891|gb|JAA58897.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 218
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 136/193 (70%), Gaps = 32/193 (16%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTFGRAK+WVKE LQR A P+IVIALAGNKADL S+R
Sbjct: 106 QDTFGRAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG--GRRL 238
VE E +AY+EENGLLFMETSAKTAMNVN+IF+ IAKKLPK E V G GRR
Sbjct: 144 VELEEAQAYSEENGLLFMETSAKTAMNVNDIFLAIAKKLPKTEQGTSAVGGGASGQGRRG 203
Query: 239 VETAEAPKTSNCC 251
V+ +E P+ S C
Sbjct: 204 VDLSEHPQQSGGC 216
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 46/53 (86%)
Query: 279 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRG QRPN Q KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGAAAQRPNGAPQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 55
>gi|307189232|gb|EFN73680.1| Ras-related protein Rab-5C [Camponotus floridanus]
gi|322784961|gb|EFZ11732.1| hypothetical protein SINV_10350 [Solenopsis invicta]
Length = 214
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 139/192 (72%), Gaps = 32/192 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTF RA++WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QDTFSRAQTWVKE---------------------LQRQASPSIVIALAGNKADLA-NKRV 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-----NGQGGRRLVE 240
VEY E + YA+ENGLLFMETSAKTAMNVN+IF+ IAKKLPK E + +GQ GRRLVE
Sbjct: 143 VEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQSGSASTSGQ-GRRLVE 201
Query: 241 T-AEAPKTSNCC 251
+ + T NCC
Sbjct: 202 SDGQKAATGNCC 213
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 54
>gi|332017090|gb|EGI57889.1| Ras-related protein Rab-5C [Acromyrmex echinatior]
Length = 214
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 139/192 (72%), Gaps = 32/192 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTF RA++WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QDTFSRAQTWVKE---------------------LQRQASPSIVIALAGNKADLA-NKRV 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-----NGQGGRRLVE 240
VEY E + YA+ENGLLFMETSAKTAMNVN+IF+ IAKKLPK E + +GQ GRRLVE
Sbjct: 143 VEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQSGSASTSGQ-GRRLVE 201
Query: 241 T-AEAPKTSNCC 251
+ + T NCC
Sbjct: 202 SDGQKAATGNCC 213
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 54
>gi|242006074|ref|XP_002423881.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507127|gb|EEB11143.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 215
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 133/188 (70%), Gaps = 27/188 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQT+C DD+T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N DT
Sbjct: 49 FQESTIGAAFLTQTICDDDLTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNMDT 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
FG+AKSWVKEL QR A PNIVIALAGNKADL + +R VE
Sbjct: 109 FGKAKSWVKEL---------------------QRHASPNIVIALAGNKADL-SDKRMVET 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG----GRRLVETAEA 244
E +AYA+++GLLFMETSAKTAMNVNEIF+ IAKKLPK E G G GRRLVE +
Sbjct: 147 DEAQAYAQDHGLLFMETSAKTAMNVNEIFLAIAKKLPKNEQAGGAGTSGQGRRLVEGGDG 206
Query: 245 PKTS-NCC 251
K + NCC
Sbjct: 207 QKAAGNCC 214
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 43/52 (82%)
Query: 280 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
R G QRP Q K+ Q+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RSGTAQRPTGAFQGKVHQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG 55
>gi|340718353|ref|XP_003397633.1| PREDICTED: ras-related protein Rab-5C-like [Bombus terrestris]
gi|350401655|ref|XP_003486219.1| PREDICTED: ras-related protein Rab-5C-like [Bombus impatiens]
Length = 214
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 140/192 (72%), Gaps = 32/192 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTF RA++WVKE LQR A P+IVIALAGNKADL +++R
Sbjct: 105 QDTFVRAQTWVKE---------------------LQRQASPSIVIALAGNKADL-SNKRV 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-----NGQGGRRLVE 240
VE+ E + YA+ENGLLFMETSAKTAMNVN+IF+ IAKKLPK E + +GQ GRRLVE
Sbjct: 143 VEFDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQSGNASTSGQ-GRRLVE 201
Query: 241 T-AEAPKTSNCC 251
T + T NCC
Sbjct: 202 TEGQKAATGNCC 213
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 54
>gi|380019933|ref|XP_003693855.1| PREDICTED: ras-related protein Rab-5C-like [Apis florea]
Length = 214
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 139/192 (72%), Gaps = 32/192 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTF RA++WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QDTFVRAQTWVKE---------------------LQRQASPSIVIALAGNKADLA-NKRI 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-----NGQGGRRLVE 240
VE+ E + YA+ENGLLFMETSAKTAMNVN+IF+ IAKKLPK E + +GQ GRRLVE
Sbjct: 143 VEFDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQSGSASTSGQ-GRRLVE 201
Query: 241 T-AEAPKTSNCC 251
T + T NCC
Sbjct: 202 TEGQKAATGNCC 213
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 54
>gi|156553974|ref|XP_001602993.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Nasonia
vitripennis]
gi|345492181|ref|XP_003426794.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Nasonia
vitripennis]
gi|345492184|ref|XP_003426795.1| PREDICTED: ras-related protein Rab-5A-like isoform 3 [Nasonia
vitripennis]
Length = 213
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 139/192 (72%), Gaps = 32/192 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLD+ T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 44 FHEYQESTIGAAFLTQTVCLDETTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 103
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTF RA +WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 104 QDTFMRATTWVKE---------------------LQRQASPSIVIALAGNKADLG-NKRV 141
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQGGRRLVE 240
VE+ E +AYA+ENGLLFMETSAKTAMNVN+IF+ IAKKLPK E +GQ GRRLVE
Sbjct: 142 VEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQAGNASTSGQ-GRRLVE 200
Query: 241 T-AEAPKTSNCC 251
+ + P T NCC
Sbjct: 201 SEGQKPATGNCC 212
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 45/50 (90%), Gaps = 1/50 (2%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNG-TQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 53
>gi|260807647|ref|XP_002598620.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
gi|229283893|gb|EEN54632.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
Length = 213
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 135/192 (70%), Gaps = 31/192 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 43 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 102
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTF RAK+WVKEL QR A PNIVIAL+GNKADL ++R
Sbjct: 103 QDTFERAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRM 140
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG----GRR--LV 239
VEY E +AYAE+N LLFMETSAKTAMNVN+IF+ IAKKLPK E G G GRR L
Sbjct: 141 VEYEEAQAYAEDNSLLFMETSAKTAMNVNDIFLAIAKKLPKNEPAGGAGNQAQGRRVDLK 200
Query: 240 ETAEAPKTSNCC 251
ET +S CC
Sbjct: 201 ETGNQQASSTCC 212
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 285 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 7 QRPNG-TQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 53
>gi|383854195|ref|XP_003702607.1| PREDICTED: ras-related protein Rab-5C-like [Megachile rotundata]
Length = 214
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/193 (63%), Positives = 140/193 (72%), Gaps = 34/193 (17%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTF RA++WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QDTFVRAQTWVKE---------------------LQRQASPSIVIALAGNKADLA-NKRV 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-----NGQGGRRLVE 240
VE+ E + YA+ENGLLFMETSAKTAMNVN+IF+ IAKKLPK E + +GQ GRRLVE
Sbjct: 143 VEFEEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQSGSASTSGQ-GRRLVE 201
Query: 241 TAEAPK--TSNCC 251
AE K T NCC
Sbjct: 202 -AEGQKAATGNCC 213
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 54
>gi|54399922|gb|AAV34202.1| Rab5 protein [Aiptasia pulchella]
Length = 215
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 139/194 (71%), Gaps = 35/194 (18%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTFGRAK+WVKEL QR A PNIVIAL+GNKADL +S+R
Sbjct: 105 QDTFGRAKTWVKEL---------------------QRQASPNIVIALSGNKADL-SSKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG------RRLV 239
V+Y E + YAEENGLLFMETSAKTAMNVN+IF+ IAKKLPK +N QGG +R V
Sbjct: 143 VDYEEAQTYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKS--DNTQGGPQAAQRQRGV 200
Query: 240 ETAEAPK--TSNCC 251
+ E + +S CC
Sbjct: 201 DLQETNQQSSSGCC 214
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 43/50 (86%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
G QRPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GPPQRPNGSAVGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 54
>gi|47210398|emb|CAF91320.1| unnamed protein product [Tetraodon nigroviridis]
Length = 210
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 134/191 (70%), Gaps = 29/191 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DT
Sbjct: 41 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNSDT 100
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKAD+ T++R VE+
Sbjct: 101 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADI-TNKRAVEH 138
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGR-----RLVET 241
E + YA++N LLFMETSAKTAMNVNEIF+ IAKKLPK + V GQGGR L ET
Sbjct: 139 QEAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNDPQVGPGQGGRVRTGVDLQET 198
Query: 242 AEAPKTSNCCN 252
A ++ CC+
Sbjct: 199 APQGRSGQCCS 209
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
RPN T A KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 1 RPNGATVANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG 47
>gi|391334640|ref|XP_003741710.1| PREDICTED: ras-related protein Rab-5C-like [Metaseiulus
occidentalis]
Length = 210
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 135/187 (72%), Gaps = 26/187 (13%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYD+TN
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDLTN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 105 PDTFSRAKTWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR-RLVETAEA 244
VE +E +AYA+EN LLFMETSAKTA NVN+IF+ IAKKLPK + N QG R + ++AE+
Sbjct: 143 VETAEAQAYADENQLLFMETSAKTATNVNDIFLAIAKKLPKNDAANQQGQRLNVAQSAES 202
Query: 245 PKTSNCC 251
++ CC
Sbjct: 203 NQSGGCC 209
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/45 (84%), Positives = 40/45 (88%)
Query: 288 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
N T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 11 NGATAGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|443707017|gb|ELU02811.1| hypothetical protein CAPTEDRAFT_227582 [Capitella teleta]
Length = 210
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 134/187 (71%), Gaps = 26/187 (13%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 44 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 103
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTFGRAK+WV+EL QR A PNIVIALAGNKADL ++R
Sbjct: 104 QDTFGRAKTWVREL---------------------QRQASPNIVIALAGNKADL-ANKRM 141
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR-RLVETAEA 244
VEY E +AYAEEN LLFMETSAKTAMNVN+IF+ IAKKLPK E Q R R V+ ++
Sbjct: 142 VEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNEQAGQQQSRQRGVDLSQE 201
Query: 245 PKTSNCC 251
+ S C
Sbjct: 202 NQPSGGC 208
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
G QRPN Q+KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GGAQRPNG-PQSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 54
>gi|431890611|gb|ELK01490.1| Ras-related protein Rab-5C [Pteropus alecto]
Length = 258
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 135/200 (67%), Gaps = 30/200 (15%)
Query: 59 CMTQIVINVVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAI 118
C + + + +P +AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI
Sbjct: 83 CSSSFLPGTITFP--LTAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAI 140
Query: 119 IVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKAD 178
+VYDITN DTF RAK+WVKEL QR A PNIVIALAGNKAD
Sbjct: 141 VVYDITNTDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKAD 179
Query: 179 LPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG---- 234
L S+R VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G
Sbjct: 180 L-ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGR 238
Query: 235 --GRRLVETAEAPKTSNCCN 252
G L E A ++ C N
Sbjct: 239 NRGVDLQENNPASRSQCCSN 258
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIGG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGG 56
>gi|148222944|ref|NP_001080714.1| RAB5C, member RAS oncogene family [Xenopus laevis]
gi|33416792|gb|AAH56058.1| Rab5-prov protein [Xenopus laevis]
Length = 215
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 135/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+TF RAK+WVKEL QR A PNIVIAL+GNKADL +S+R
Sbjct: 106 TETFARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-SSKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ---GGRRLVETA 242
V++ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N Q G R V+
Sbjct: 144 VDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAQSTTGRNRGVDLQ 203
Query: 243 E--APKTSNCCN 252
E P S CCN
Sbjct: 204 ENNPPSRSQCCN 215
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 282 GRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
G RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTSARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|387861356|gb|AFK08607.1| Rab GTPase [Litopenaeus vannamei]
Length = 210
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 132/189 (69%), Gaps = 28/189 (14%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 43 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 102
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTFGRAK+WVKEL QR A PNIVIALAGNKADL ++R
Sbjct: 103 QDTFGRAKTWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRM 140
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE---VNNGQGGRRLVETA 242
VEY E + YAEEN LLFMETSAKTAMNVN+IF+ IAKKLPK + + +G L
Sbjct: 141 VEYEEAQTYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKSDSTASGSPRGDVSLSNNQ 200
Query: 243 EAPKTSNCC 251
A T+ CC
Sbjct: 201 PAQGTAGCC 209
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 44/51 (86%), Gaps = 2/51 (3%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
G QRPN Q KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGQ--GKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 53
>gi|50979062|ref|NP_001003261.1| ras-related protein Rab-5C [Canis lupus familiaris]
gi|1710027|sp|P51147.1|RAB5C_CANFA RecName: Full=Ras-related protein Rab-5C
gi|415377|emb|CAA81626.1| Rab5c protein [Canis lupus familiaris]
Length = 216
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 133/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPSRNRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E + A ++ C N
Sbjct: 204 ENSPASRSQCCSN 216
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|72165047|ref|XP_783878.1| PREDICTED: ras-related protein Rab-5B-like [Strongylocentrotus
purpuratus]
Length = 216
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 134/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITNQ+T
Sbjct: 47 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQET 106
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
FGRAK+WVKEL QR A PNIVIALAGNKADL ++R VE+
Sbjct: 107 FGRAKTWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRMVEF 144
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG-----QGGRRLVETAE 243
E +AYAEEN LLFMETSAKTAMNVN+IF+ IAKKLPK + G +G R V+ E
Sbjct: 145 EEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNDQVGGPTSGQRGTNRGVDLTE 204
Query: 244 APKTSN--CC 251
+ + S+ CC
Sbjct: 205 SNQQSSGGCC 214
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 47/52 (90%), Gaps = 2/52 (3%)
Query: 280 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
RGG QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGG-AQRPNG-TQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG 53
>gi|20072723|gb|AAH27378.1| Rab5c protein, partial [Mus musculus]
Length = 203
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 133/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 33 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 92
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 93 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 130
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 131 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRTRGVDLQ 190
Query: 240 ETAEAPKTSNCCN 252
E+ A ++ C N
Sbjct: 191 ESNPASRSQCCSN 203
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/39 (92%), Positives = 38/39 (97%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 43
>gi|77736431|ref|NP_001029915.1| ras-related protein Rab-5C [Bos taurus]
gi|346716331|ref|NP_001231183.1| ras-related protein Rab-5C [Sus scrofa]
gi|410981133|ref|XP_003996927.1| PREDICTED: ras-related protein Rab-5C [Felis catus]
gi|426238047|ref|XP_004012969.1| PREDICTED: ras-related protein Rab-5C [Ovis aries]
gi|75052596|sp|Q58DS9.1|RAB5C_BOVIN RecName: Full=Ras-related protein Rab-5C
gi|61553191|gb|AAX46365.1| RAB5C, member RAS oncogene family isoform b [Bos taurus]
gi|109659170|gb|AAI18227.1| RAB5C, member RAS oncogene family [Bos taurus]
gi|296476370|tpg|DAA18485.1| TPA: ras-related protein Rab-5C [Bos taurus]
gi|440903244|gb|ELR53931.1| Ras-related protein Rab-5C [Bos grunniens mutus]
Length = 216
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 132/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYAE+N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 144 VEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRNRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E A ++ C N
Sbjct: 204 ENNPASRSQCCSN 216
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|74215300|dbj|BAE41866.1| unnamed protein product [Mus musculus]
Length = 216
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 133/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRTRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E+ A ++ C N
Sbjct: 204 ESIPASRSQCCSN 216
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|317419436|emb|CBN81473.1| Ras-related protein Rab-5C [Dicentrarchus labrax]
Length = 221
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 130/190 (68%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DT
Sbjct: 50 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDT 109
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKAD+ ++R VE
Sbjct: 110 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADI-ANKRAVEL 147
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGR-----RLVET 241
E + YA++N LLFMETSAKTAMNVNEIF+ IAKKLPK + GQGGR L E
Sbjct: 148 QEAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNDPQAGAGQGGRTRTGVDLQEA 207
Query: 242 AEAPKTSNCC 251
A ++S CC
Sbjct: 208 APQSRSSQCC 217
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRGG RPN A KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGGGATRPNGAAVANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG 56
>gi|113866024|ref|NP_077776.2| ras-related protein Rab-5C [Mus musculus]
gi|38258917|sp|P35278.2|RAB5C_MOUSE RecName: Full=Ras-related protein Rab-5C
gi|18606182|gb|AAH23027.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|20988213|gb|AAH29678.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|74186351|dbj|BAE42948.1| unnamed protein product [Mus musculus]
gi|74195703|dbj|BAE39656.1| unnamed protein product [Mus musculus]
gi|74204684|dbj|BAE35411.1| unnamed protein product [Mus musculus]
gi|112292959|dbj|BAF02857.1| Rab5C [Mus musculus]
gi|148670588|gb|EDL02535.1| RAB5C, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 133/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRTRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E+ A ++ C N
Sbjct: 204 ESNPASRSQCCSN 216
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|45383121|ref|NP_989856.1| ras-related protein Rab-5C [Gallus gallus]
gi|326934183|ref|XP_003213173.1| PREDICTED: ras-related protein Rab-5C-like [Meleagris gallopavo]
gi|82246551|sp|Q98932.1|RAB5C_CHICK RecName: Full=Ras-related protein Rab-5C; AltName: Full=Rab5C-like
protein
gi|1531769|emb|CAA69142.1| rab5C-like protein [Gallus gallus]
gi|449267489|gb|EMC78432.1| Ras-related protein Rab-5C [Columba livia]
Length = 216
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 135/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL T +R
Sbjct: 106 TDTFVRAKNWVKEL---------------------QRQASPNIVIALAGNKADLAT-KRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG---RRLVETA 242
V++ + + YA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N GG R+V+
Sbjct: 144 VDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGGPGRNRVVDLQ 203
Query: 243 EA--PKTSNCCN 252
E+ P S CC+
Sbjct: 204 ESSQPSRSQCCS 215
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|387017972|gb|AFJ51104.1| ras-related protein Rab-5B-like [Crotalus adamanteus]
Length = 214
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 136/191 (71%), Gaps = 29/191 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKEL QR A PNIVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGRRLVETAE 243
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E + G GRR V+ E
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSIGGAVGRRGVDLHE 202
Query: 244 APK--TSNCCN 252
+ S CC+
Sbjct: 203 QSQQNKSQCCS 213
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q+QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|54020962|ref|NP_001005723.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49522606|gb|AAH75323.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 134/189 (70%), Gaps = 27/189 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITNQ+T
Sbjct: 48 FQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQET 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL TS+R VEY
Sbjct: 108 FARAKTWVKEL---------------------QRQASPNIVIALSGNKADL-TSKRMVEY 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GR-RLVETAEAP 245
E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+ E
Sbjct: 146 EEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKTEPQNTSGAPGRSRGVDLHEQT 205
Query: 246 K--TSNCCN 252
+ S CC+
Sbjct: 206 QQNKSQCCS 214
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 48/55 (87%), Gaps = 3/55 (5%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRG RPN Q+QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGA--ARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|347800697|ref|NP_001099310.2| ras-related protein Rab-5C [Rattus norvegicus]
gi|149054244|gb|EDM06061.1| rCG32615, isoform CRA_a [Rattus norvegicus]
gi|165970759|gb|AAI58857.1| Rab5c protein [Rattus norvegicus]
Length = 216
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 133/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRNRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E+ A ++ C N
Sbjct: 204 ESNPASRSQCCSN 216
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|71896479|ref|NP_001025499.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89270950|emb|CAJ81259.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 137/192 (71%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+CLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+TF RAK+WVKEL QR A PNIVIAL+GNKADL +S+R
Sbjct: 106 TETFARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-SSKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GR-RLVETA 242
V++ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N QG GR R V+
Sbjct: 144 VDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAQGNTGRNRGVDLQ 203
Query: 243 E--APKTSNCCN 252
E P S CC+
Sbjct: 204 ENNPPSRSQCCS 215
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 282 GRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
G RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTTARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|403304464|ref|XP_003942816.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Saimiri
boliviensis boliviensis]
gi|403304466|ref|XP_003942817.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Saimiri
boliviensis boliviensis]
gi|403304468|ref|XP_003942818.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Saimiri
boliviensis boliviensis]
Length = 216
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 133/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRNRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E+ A ++ C N
Sbjct: 204 ESNPASRSQCCSN 216
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPASGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|225717846|gb|ACO14769.1| Ras-related protein Rab-5C [Caligus clemensi]
Length = 220
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 131/190 (68%), Gaps = 26/190 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQT+CLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYD+TNQD+
Sbjct: 53 FQESTIGAAFLTQTICLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDVTNQDS 112
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNK DL T++R V Y
Sbjct: 113 FTRAKNWVKEL---------------------QRQASPNIVIALAGNKNDL-TTKRLVMY 150
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK--KEVNNGQGGRRLVE--TAEA 244
E + YAEENGLLFMETSAKTA+NVN+IF+EIAKKLPK N+ GG RL AE+
Sbjct: 151 EEAQTYAEENGLLFMETSAKTALNVNDIFMEIAKKLPKDGDSGNSQSGGHRLTNGPNAES 210
Query: 245 PKTSNCCNTQ 254
CC Q
Sbjct: 211 RSGFQCCKFQ 220
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+I Q+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 22 RIFQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 60
>gi|344285066|ref|XP_003414284.1| PREDICTED: ras-related protein Rab-5C-like [Loxodonta africana]
Length = 216
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 132/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRNRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E A ++ C N
Sbjct: 204 ENNPASRSQCCSN 216
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPASGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|301773541|ref|XP_002922175.1| PREDICTED: ras-related protein Rab-5C-like [Ailuropoda melanoleuca]
gi|281344533|gb|EFB20117.1| hypothetical protein PANDA_011151 [Ailuropoda melanoleuca]
Length = 216
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 132/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPSRNRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E A ++ C N
Sbjct: 204 ENNPASRSQCCSN 216
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|395826386|ref|XP_003786399.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Otolemur
garnettii]
gi|395826388|ref|XP_003786400.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Otolemur
garnettii]
Length = 216
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 132/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRNRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E A ++ C N
Sbjct: 204 ENNPASRSQCCSN 216
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-TARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|126307942|ref|XP_001364024.1| PREDICTED: ras-related protein Rab-5C-like [Monodelphis domestica]
Length = 216
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 135/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-GSKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GR-RLVETA 242
V++ E +AYAE+N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G GR R V+
Sbjct: 144 VDFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGAPGRNRGVDLQ 203
Query: 243 EAPKT--SNCCN 252
E T S CC+
Sbjct: 204 ENSPTSRSQCCS 215
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 55
>gi|41393545|ref|NP_004574.2| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|41393614|ref|NP_958842.1| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|197101217|ref|NP_001127529.1| ras-related protein Rab-5C [Pongo abelii]
gi|350539365|ref|NP_001233312.1| ras-related protein Rab-5C [Pan troglodytes]
gi|388454362|ref|NP_001253100.1| ras-related protein Rab-5C [Macaca mulatta]
gi|332260865|ref|XP_003279501.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Nomascus
leucogenys]
gi|332260867|ref|XP_003279502.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Nomascus
leucogenys]
gi|397485574|ref|XP_003813918.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Pan paniscus]
gi|397485576|ref|XP_003813919.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Pan paniscus]
gi|397485580|ref|XP_003813921.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Pan paniscus]
gi|426348253|ref|XP_004041752.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Gorilla gorilla
gorilla]
gi|426348259|ref|XP_004041755.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Gorilla gorilla
gorilla]
gi|441677628|ref|XP_004092752.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|441677631|ref|XP_004092753.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|38258923|sp|P51148.2|RAB5C_HUMAN RecName: Full=Ras-related protein Rab-5C; AltName: Full=L1880;
AltName: Full=RAB5L
gi|75054865|sp|Q5R7L7.1|RAB5C_PONAB RecName: Full=Ras-related protein Rab-5C
gi|7672665|gb|AAF66594.1|AF141304_1 small GTPase [Homo sapiens]
gi|20379052|gb|AAM21086.1|AF498938_1 small GTP binding protein RAB5C [Homo sapiens]
gi|49456757|emb|CAG46699.1| RAB5C [Homo sapiens]
gi|54695838|gb|AAV38291.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|55731054|emb|CAH92243.1| hypothetical protein [Pongo abelii]
gi|60822879|gb|AAX36624.1| RAB5C member RAS oncogene family [synthetic construct]
gi|61356072|gb|AAX41205.1| RAB5C member RAS oncogene family [synthetic construct]
gi|76779854|gb|AAI06040.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|109731489|gb|AAI14440.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|119581209|gb|EAW60805.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581210|gb|EAW60806.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581211|gb|EAW60807.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|190689983|gb|ACE86766.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|190691355|gb|ACE87452.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|261860716|dbj|BAI46880.1| RAB5C, member RAS oncogene family [synthetic construct]
gi|343960018|dbj|BAK63863.1| ras-related protein Rab-5C [Pan troglodytes]
gi|355568697|gb|EHH24978.1| RAB5L [Macaca mulatta]
gi|355754177|gb|EHH58142.1| hypothetical protein EGM_07930 [Macaca fascicularis]
gi|380815232|gb|AFE79490.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|383411673|gb|AFH29050.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|384941764|gb|AFI34487.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
Length = 216
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 132/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E A ++ C N
Sbjct: 204 ENNPASRSQCCSN 216
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|149723790|ref|XP_001495006.1| PREDICTED: ras-related protein Rab-5C-like [Equus caballus]
Length = 216
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 132/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRNRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E A ++ C N
Sbjct: 204 ENNPASRSQCCSN 216
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|508285|gb|AAA74081.1| Rab5c-like protein, similar to Canis familiaris Rab5c protein, PIR
Accession Number S38625 [Homo sapiens]
gi|642532|gb|AAB08927.1| ras-related small GTP binding protein Rab5 [Homo sapiens]
Length = 216
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 132/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E A ++ C N
Sbjct: 204 ENNPASRSQCCSN 216
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG +RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-ARRPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|354721184|ref|NP_001238968.1| ras-related protein Rab-5C isoform b [Homo sapiens]
gi|397485578|ref|XP_003813920.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Pan paniscus]
Length = 249
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 132/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 79 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 138
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 139 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 176
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 177 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQ 236
Query: 240 ETAEAPKTSNCCN 252
E A ++ C N
Sbjct: 237 ENNPASRSQCCSN 249
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 36 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 89
>gi|321476259|gb|EFX87220.1| hypothetical protein DAPPUDRAFT_230436 [Daphnia pulex]
Length = 227
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 134/192 (69%), Gaps = 31/192 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 57 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 116
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTFGRAK WVKEL QR A PNIVIALAGNKADL ++R
Sbjct: 117 QDTFGRAKVWVKEL---------------------QRQASPNIVIALAGNKADL-AAKRA 154
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQGGRRLVE 240
VE+ E + YAEENGLLFMETSAKTAMNVN+IF+ IAKKLPK + + GRRL
Sbjct: 155 VEFDEAKGYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKNDGAGGVGGSSGQGRRLDR 214
Query: 241 TAEAPK-TSNCC 251
+ K S+CC
Sbjct: 215 AEDGNKPASSCC 226
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%)
Query: 285 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 20 QRPNGATQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 67
>gi|426348257|ref|XP_004041754.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Gorilla gorilla
gorilla]
Length = 286
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/183 (62%), Positives = 128/183 (69%), Gaps = 28/183 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DTF RAK+W
Sbjct: 126 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNW 185
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL QR A PNIVIALAGNKADL S+R VE+ E +AYA
Sbjct: 186 VKEL---------------------QRQASPNIVIALAGNKADL-ASKRAVEFQEAQAYA 223
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLVETAEAPKTSN 249
++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L E A ++
Sbjct: 224 DDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASRSQC 283
Query: 250 CCN 252
C N
Sbjct: 284 CSN 286
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 73 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 126
>gi|405961918|gb|EKC27651.1| Ras-related protein Rab-5C [Crassostrea gigas]
Length = 213
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/163 (68%), Positives = 123/163 (75%), Gaps = 25/163 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTFGRAK+WVKEL QR A PNIVIALAGNK+DL +R
Sbjct: 105 QDTFGRAKNWVKEL---------------------QRQASPNIVIALAGNKSDL-AQKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
VEY E +AYAEEN LLFMETSAKTAMNVN+IF+ IAKKLPK E
Sbjct: 143 VEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNE 185
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/53 (84%), Positives = 47/53 (88%), Gaps = 1/53 (1%)
Query: 279 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GR G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRTG-AQRPNGATQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 54
>gi|426348255|ref|XP_004041753.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Gorilla gorilla
gorilla]
Length = 249
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 132/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 79 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 138
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 139 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 176
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 177 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQ 236
Query: 240 ETAEAPKTSNCCN 252
E A ++ C N
Sbjct: 237 ENNPASRSQCCSN 249
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 36 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 89
>gi|444714079|gb|ELW54967.1| Ras-related protein Rab-5C [Tupaia chinensis]
Length = 216
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 132/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGAPGRNRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E A ++ C N
Sbjct: 204 ENNPASRSQCCSN 216
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 280 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 4 RGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|332260869|ref|XP_003279503.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Nomascus
leucogenys]
Length = 249
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/183 (62%), Positives = 128/183 (69%), Gaps = 28/183 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DTF RAK+W
Sbjct: 89 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNW 148
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL QR A PNIVIALAGNKADL S+R VE+ E +AYA
Sbjct: 149 VKEL---------------------QRQASPNIVIALAGNKADL-ASKRAVEFQEAQAYA 186
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLVETAEAPKTSN 249
++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G G L E A ++
Sbjct: 187 DDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASRSQC 246
Query: 250 CCN 252
C N
Sbjct: 247 CSN 249
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 36 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 89
>gi|348508689|ref|XP_003441886.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 222
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 132/191 (69%), Gaps = 30/191 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DT
Sbjct: 51 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDT 110
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKAD+ ++R VE+
Sbjct: 111 FDRAKNWVKEL---------------------QRQASPNIVIALAGNKADI-ANKRAVEF 148
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-----RLVET 241
E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E GQGGR L +T
Sbjct: 149 QEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKSEPQGTAGQGGRTRTGVDLEQT 208
Query: 242 -AEAPKTSNCC 251
+ +S CC
Sbjct: 209 NPQGSSSSRCC 219
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/39 (89%), Positives = 38/39 (97%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 20 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 58
>gi|354485034|ref|XP_003504689.1| PREDICTED: ras-related protein Rab-5C-like [Cricetulus griseus]
gi|344251933|gb|EGW08037.1| Ras-related protein Rab-5C [Cricetulus griseus]
Length = 216
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 137/192 (71%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G GR R V+
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNVTGAPGRNRGVDLQ 203
Query: 243 EA-PKT-SNCCN 252
E+ P + S CC+
Sbjct: 204 ESNPASRSQCCS 215
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|350537173|ref|NP_001232748.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197128640|gb|ACH45138.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 216
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 135/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL ++R
Sbjct: 106 TDTFVRAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG---RRLVETA 242
V++ + + YA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N GG R+V+
Sbjct: 144 VDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGGPGRNRVVDLQ 203
Query: 243 EA--PKTSNCCN 252
E+ P S CC+
Sbjct: 204 ESSQPSRSQCCS 215
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|395532394|ref|XP_003768255.1| PREDICTED: uncharacterized protein LOC100922389 [Sarcophilus
harrisii]
Length = 495
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/182 (63%), Positives = 131/182 (71%), Gaps = 27/182 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DTF RAK+W
Sbjct: 335 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNW 394
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE LQR A PNIVIALAGNKADL S+R V++ E +AYA
Sbjct: 395 VKE---------------------LQRQASPNIVIALAGNKADL-ASKRAVDFQEAQAYA 432
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GR-RLVETAEAPKT--SNC 250
++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G GR R V+ E T S C
Sbjct: 433 DDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGAPGRNRGVDLQENSPTSRSQC 492
Query: 251 CN 252
C+
Sbjct: 493 CS 494
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 282 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 334
>gi|156407426|ref|XP_001641545.1| predicted protein [Nematostella vectensis]
gi|156228684|gb|EDO49482.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 129/172 (75%), Gaps = 27/172 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTF RAK+WVKEL QR A PNIVIAL+GNKADL S+R
Sbjct: 106 QDTFARAKTWVKEL---------------------QRQASPNIVIALSGNKADL-ASKRM 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRR 237
VEY + ++YAE+NGLLFMETSAKTAMNVN+IF+ IAKKLPK + N GG++
Sbjct: 144 VEYEDAQSYAEDNGLLFMETSAKTAMNVNDIFLAIAKKLPKSD--NTPGGQQ 193
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 46/52 (88%), Gaps = 1/52 (1%)
Query: 280 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
RGG QRPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 RGG-AQRPNGATMGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 55
>gi|225713422|gb|ACO12557.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290462345|gb|ADD24220.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290561497|gb|ADD38149.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
Length = 216
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 132/189 (69%), Gaps = 26/189 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQT+CLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYD+TNQD+
Sbjct: 49 FQESTIGAAFLTQTICLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDVTNQDS 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKELQ R A PNIVIALAGNKADL T +R V Y
Sbjct: 109 FIRAKNWVKELQ---------------------RQASPNIVIALAGNKADLNT-KRLVIY 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK--KEVNNGQGGRRLV--ETAEA 244
E + YAEENGLLFMETSAKTA+NVN++F+EIAKKLPK N GG+RL ++ +
Sbjct: 147 EEAQTYAEENGLLFMETSAKTALNVNDVFLEIAKKLPKDGDSSNVQSGGQRLTNGQSTDG 206
Query: 245 PKTSNCCNT 253
+ CC +
Sbjct: 207 RNSMPCCKS 215
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/38 (89%), Positives = 37/38 (97%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
ICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|315434208|ref|NP_001186777.1| ras-related protein Rab-5B [Gallus gallus]
gi|326935660|ref|XP_003213886.1| PREDICTED: ras-related protein Rab-5B-like [Meleagris gallopavo]
gi|75571188|sp|Q5ZHW4.1|RAB5B_CHICK RecName: Full=Ras-related protein Rab-5B
gi|53136700|emb|CAG32679.1| hypothetical protein RCJMB04_32j11 [Gallus gallus]
Length = 215
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 136/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL S+R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ASKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGR-RLVETA 242
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E +G GR R V+
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSTSGAAGRSRGVDLH 202
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 203 EQTQQNKSQCCS 214
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q+QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|25304086|gb|AAH40143.1| RAB5B protein, partial [Homo sapiens]
Length = 267
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 136/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 97 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 156
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 157 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 194
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+
Sbjct: 195 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLH 254
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 255 EQSQQNKSQCCS 266
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 268 TMANSNNSNSNGRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQ 326
T+++S+N R RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQ
Sbjct: 44 TLSHSDNLAMTSRS--TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQ 101
Query: 327 ESTIGG 332
ESTIG
Sbjct: 102 ESTIGA 107
>gi|289743331|gb|ADD20413.1| Rab protein 5 [Glossina morsitans morsitans]
Length = 222
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 131/188 (69%), Gaps = 27/188 (14%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+C++D ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 56 FHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQN 115
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QD+F RA +WVKE L + A PNIVIALAGNKADL ++ R
Sbjct: 116 QDSFQRATTWVKE---------------------LHKQASPNIVIALAGNKADL-SNIRV 153
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV--NNGQGGRRLVETAE 243
VEY E + YAEENGLLFMETSAKT MNVN+IF+ IAKKLPK + N Q GRRL E
Sbjct: 154 VEYEEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGANNQAQAGRRLNENEN 213
Query: 244 APKTSNCC 251
+T+NCC
Sbjct: 214 NRQTNNCC 221
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 48/58 (82%)
Query: 275 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
S++ GG QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 9 SSTGSSGGTAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 66
>gi|291406117|ref|XP_002719438.1| PREDICTED: RAB5C, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 216
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 132/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E + G G L
Sbjct: 144 VEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQSAAGAPGRNRGVDLQ 203
Query: 240 ETAEAPKTSNCCN 252
E A ++ C N
Sbjct: 204 ENNPASRSQCCSN 216
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|121583768|ref|NP_001073405.1| ras-related protein Rab-5B [Rattus norvegicus]
gi|120537414|gb|AAI29102.1| RAB5B, member RAS oncogene family [Rattus norvegicus]
gi|149029654|gb|EDL84825.1| RAB5B, member RAS oncogene family (predicted), isoform CRA_c
[Rattus norvegicus]
Length = 215
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 135/193 (69%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGRR----LV 239
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR L
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNPGGAAGRSRGVDLH 202
Query: 240 ETAEAPKTSNCCN 252
E A+ K+ C N
Sbjct: 203 EQAQQNKSQCCSN 215
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|224045361|ref|XP_002196933.1| PREDICTED: ras-related protein Rab-5A [Taeniopygia guttata]
Length = 215
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 130/190 (68%), Gaps = 28/190 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLVETA 242
E +AYA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N G L E
Sbjct: 146 QEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNAGASSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ PKT C N
Sbjct: 206 QPPKTQCCSN 215
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|112292957|dbj|BAF02856.1| Rab5B [Mus musculus]
Length = 229
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 136/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 59 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 118
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 119 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 156
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+
Sbjct: 157 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLH 216
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 217 EQSQQNKSQCCS 228
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 22 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 69
>gi|60826707|gb|AAX36768.1| RAB5B member RAS oncogene family [synthetic construct]
Length = 216
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 136/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLH 202
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 203 EQSQQNKSQCCS 214
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|440897250|gb|ELR48982.1| Ras-related protein Rab-5B, partial [Bos grunniens mutus]
Length = 227
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 136/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 57 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 116
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 117 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 154
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+
Sbjct: 155 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRTRGVDLH 214
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 215 EQSQQNKSQCCS 226
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 268 TMANSNNSNSNGRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQ 326
T+++S+N R RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQ
Sbjct: 4 TLSHSDNLAMTSRS--TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQ 61
Query: 327 ESTIGG 332
ESTIG
Sbjct: 62 ESTIGA 67
>gi|4506371|ref|NP_002859.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|28916687|ref|NP_803130.1| ras-related protein Rab-5B isoform 1 [Mus musculus]
gi|197099504|ref|NP_001125512.1| ras-related protein Rab-5B [Pongo abelii]
gi|354725902|ref|NP_001238965.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|73968313|ref|XP_531627.2| PREDICTED: ras-related protein Rab-5B isoform 1 [Canis lupus
familiaris]
gi|291389411|ref|XP_002711110.1| PREDICTED: RAB5B, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|332207599|ref|XP_003252883.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Nomascus
leucogenys]
gi|332839019|ref|XP_003313654.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan troglodytes]
gi|344266193|ref|XP_003405165.1| PREDICTED: ras-related protein Rab-5B-like [Loxodonta africana]
gi|348580964|ref|XP_003476248.1| PREDICTED: ras-related protein Rab-5B-like [Cavia porcellus]
gi|390467774|ref|XP_002752642.2| PREDICTED: ras-related protein Rab-5B [Callithrix jacchus]
gi|397509152|ref|XP_003825000.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Pan paniscus]
gi|397509154|ref|XP_003825001.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan paniscus]
gi|410046526|ref|XP_003952209.1| PREDICTED: ras-related protein Rab-5B [Pan troglodytes]
gi|410964757|ref|XP_003988919.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Felis catus]
gi|426224979|ref|XP_004006646.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Ovis aries]
gi|46577637|sp|P61020.1|RAB5B_HUMAN RecName: Full=Ras-related protein Rab-5B
gi|48474314|sp|P61021.1|RAB5B_MOUSE RecName: Full=Ras-related protein Rab-5B
gi|75055067|sp|Q5RBG1.1|RAB5B_PONAB RecName: Full=Ras-related protein Rab-5B
gi|20379050|gb|AAM21085.1|AF498937_1 small GTP binding protein RAB5B [Homo sapiens]
gi|35839|emb|CAA38653.1| ras related protein Rab5b [Homo sapiens]
gi|871435|emb|CAA59016.1| rab5b [Mus musculus]
gi|26349073|dbj|BAC38176.1| unnamed protein product [Mus musculus]
gi|31873318|emb|CAD97650.1| hypothetical protein [Homo sapiens]
gi|45708723|gb|AAH32740.1| RAB5B protein [Homo sapiens]
gi|49456341|emb|CAG46491.1| RAB5B [Homo sapiens]
gi|55728309|emb|CAH90899.1| hypothetical protein [Pongo abelii]
gi|117645878|emb|CAL38406.1| hypothetical protein [synthetic construct]
gi|119617268|gb|EAW96862.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119617269|gb|EAW96863.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|127797687|gb|AAH50558.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798430|gb|AAH56422.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798643|gb|AAH65298.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|148692650|gb|EDL24597.1| RAB5B, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|158258631|dbj|BAF85286.1| unnamed protein product [Homo sapiens]
gi|187952647|gb|AAI37575.1| RAB5B, member RAS oncogene family [Mus musculus]
gi|208967242|dbj|BAG73635.1| RAB5B, member RAS oncogene family [synthetic construct]
gi|223459814|gb|AAI37576.1| Rab5b protein [Mus musculus]
gi|410217062|gb|JAA05750.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410268074|gb|JAA22003.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410299464|gb|JAA28332.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410340889|gb|JAA39391.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|444518222|gb|ELV12033.1| Ras-related protein Rab-5B [Tupaia chinensis]
Length = 215
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 136/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLH 202
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 203 EQSQQNKSQCCS 214
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|340378375|ref|XP_003387703.1| PREDICTED: ras-related protein Rab-5C-like [Amphimedon
queenslandica]
Length = 221
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 131/181 (72%), Gaps = 31/181 (17%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTV LDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVNLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 QDTFARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRM 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQGGR-RLV 239
VEY + +AYAEEN LLFMETSAKTAMNVNEIF+ IAKKLPK + V + GGR R+V
Sbjct: 144 VEYDDAQAYAEENSLLFMETSAKTAMNVNEIFLAIAKKLPKTDPGQQRVGSQSGGRGRVV 203
Query: 240 E 240
+
Sbjct: 204 D 204
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 46/54 (85%)
Query: 279 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
R G +QRPN + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 ARPGAVQRPNGIPREKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|49168452|emb|CAG38721.1| RAB5B [Homo sapiens]
Length = 215
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 136/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLH 202
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 203 EQSQQNKSQCCS 214
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ++LVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFELVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|329664122|ref|NP_001193120.1| ras-related protein Rab-5B [Bos taurus]
gi|296487563|tpg|DAA29676.1| TPA: RAB5B, member RAS oncogene family-like [Bos taurus]
Length = 215
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 136/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRTRGVDLH 202
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 203 EQSQQNKSQCCS 214
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|348562462|ref|XP_003467029.1| PREDICTED: ras-related protein Rab-5C-like [Cavia porcellus]
Length = 216
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 135/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL S+R
Sbjct: 106 TDTFLRAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
VE+ + +AYAE+N LLFMETSAKTAMNVNE+F+ IAKKLPK E N G GR R V+
Sbjct: 144 VEFQDAQAYAEDNSLLFMETSAKTAMNVNEVFMAIAKKLPKNEPQNVAGAPGRNRGVDLQ 203
Query: 243 EAPKTS--NCCN 252
E+ S CC+
Sbjct: 204 ESSPASRGQCCS 215
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPASGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 55
>gi|449281648|gb|EMC88684.1| Ras-related protein Rab-5A [Columba livia]
Length = 215
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 133/190 (70%), Gaps = 28/190 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E +AYA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 146 QEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQSAGANSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ PK+ C N
Sbjct: 206 QPPKSQCCSN 215
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|354488169|ref|XP_003506243.1| PREDICTED: ras-related protein Rab-5B-like [Cricetulus griseus]
gi|344256418|gb|EGW12522.1| Ras-related protein Rab-5B [Cricetulus griseus]
Length = 215
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 136/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRNRGVDLH 202
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 203 EQSQQNKSQCCS 214
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|395540530|ref|XP_003772206.1| PREDICTED: ras-related protein Rab-5B [Sarcophilus harrisii]
Length = 215
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 136/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNMGGTAGRSRGVDLH 202
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 203 EQSQQNKSQCCS 214
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|149756750|ref|XP_001504847.1| PREDICTED: ras-related protein Rab-5B-like [Equus caballus]
Length = 215
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 136/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNPGGAAGRSRGVDLH 202
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 203 EQSQQNKSQCCS 214
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|170031849|ref|XP_001843796.1| rab5 [Culex quinquefasciatus]
gi|167871195|gb|EDS34578.1| rab5 [Culex quinquefasciatus]
Length = 215
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 131/187 (70%), Gaps = 25/187 (13%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVC+DD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 50 FHEYQESTIGAAFLTQTVCIDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQN 109
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QD+F RAK+WVKEL QR A PNIVIALAGNKADL S R
Sbjct: 110 QDSFARAKTWVKEL---------------------QRQASPNIVIALAGNKADLANS-RV 147
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
V+Y E + YA++NGLLFMETSAKTA+NVN+IF+ IAKKLPK E Q R + ++
Sbjct: 148 VDYEEAKQYADDNGLLFMETSAKTAVNVNDIFLAIAKKLPKNEGTGPQQNIRPTQNEQSR 207
Query: 246 KTSNCCN 252
+ S CC+
Sbjct: 208 QNSGCCS 214
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/51 (86%), Positives = 46/51 (90%)
Query: 281 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GG QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 9 GGGAQRPNGATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 59
>gi|335307623|ref|XP_003360910.1| PREDICTED: ras-related protein Rab-5B-like [Sus scrofa]
Length = 215
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 136/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+
Sbjct: 143 VEYEEAQAYADDNTLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLH 202
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 203 EQSQQNKSQCCS 214
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|326921972|ref|XP_003207227.1| PREDICTED: ras-related protein Rab-5A-like [Meleagris gallopavo]
Length = 215
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 133/190 (70%), Gaps = 28/190 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E +AYA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 146 QEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNTGANSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ PK+ C N
Sbjct: 206 QPPKSQCCSN 215
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|417408967|gb|JAA51011.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 242
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/182 (61%), Positives = 132/182 (72%), Gaps = 27/182 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITNQ+TF RAK+W
Sbjct: 82 AAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTW 141
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE LQR A P+IVIALAGNKADL ++R VEY E +AYA
Sbjct: 142 VKE---------------------LQRQASPSIVIALAGNKADL-ANKRMVEYEEAQAYA 179
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETAEAPK--TSNC 250
++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+ E + S C
Sbjct: 180 DDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQC 239
Query: 251 CN 252
C+
Sbjct: 240 CS 241
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 35 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 82
>gi|147899221|ref|NP_001080535.1| RAB5A, member RAS oncogene family [Xenopus laevis]
gi|27694927|gb|AAH43866.1| Rab5a-prov protein [Xenopus laevis]
gi|76780128|gb|AAI06314.1| Rab5a-prov protein [Xenopus laevis]
Length = 216
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 132/190 (69%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL T +R V++
Sbjct: 109 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADLST-KRAVDF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLVETA 242
E +AYA++N LLFMETSAKT++NVNEIF+ IAKKLPK E G G L ETA
Sbjct: 147 QEAQAYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKTEPQAGASNTIRGRGVDLTETA 206
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 207 Q-PTKSQCCS 215
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 280 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|327276980|ref|XP_003223244.1| PREDICTED: ras-related protein Rab-5B-like [Anolis carolinensis]
Length = 215
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 134/193 (69%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKEL QR A PNIVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E + G G L
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSTGGAMGRNRGVDLH 202
Query: 240 ETAEAPKTSNCCN 252
E ++ K+ C N
Sbjct: 203 EQSQQNKSQCCSN 215
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q+QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|56118881|ref|NP_001008068.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51703418|gb|AAH80959.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267359|emb|CAJ83124.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 132/190 (69%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL S+R V++
Sbjct: 109 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ASKRAVDF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLVETA 242
E +AYA++N LLFMETSAKT++NVNEIF+ IAKKLPK E G G L ETA
Sbjct: 147 QEAQAYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKTEPQAGGSNTIRGRGVDLTETA 206
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 207 Q-PTKSQCCS 215
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 280 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|410895511|ref|XP_003961243.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 221
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 130/191 (68%), Gaps = 29/191 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DT
Sbjct: 50 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNSDT 109
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKAD+ ++R VE+
Sbjct: 110 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADI-ANKRAVEH 147
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG-------QGGRRLVET 241
E + YA+EN LLFMETSAKTA+NVNEIF+ IAKKLPK E G + G L E
Sbjct: 148 QEAQTYADENSLLFMETSAKTAINVNEIFMAIAKKLPKSEPQGGPGQGGRVRTGVDLQEA 207
Query: 242 AEAPKTSNCCN 252
A ++S CC+
Sbjct: 208 APQGRSSQCCS 218
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GR G RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRSGGATRPNGATVTNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 57
>gi|57530730|ref|NP_001006363.1| ras-related protein Rab-5A [Gallus gallus]
gi|53135109|emb|CAG32396.1| hypothetical protein RCJMB04_24h4 [Gallus gallus]
Length = 215
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 130/190 (68%), Gaps = 28/190 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLVETA 242
E +AYA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N G L E
Sbjct: 146 QEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNTGASSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ PK+ C N
Sbjct: 206 QPPKSQCCSN 215
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|157117083|ref|XP_001658691.1| rab5 [Aedes aegypti]
gi|108876182|gb|EAT40407.1| AAEL007845-PA [Aedes aegypti]
Length = 214
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 131/187 (70%), Gaps = 25/187 (13%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVC+DD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 49 FHEYQESTIGAAFLTQTVCIDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQN 108
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QD+F RAK+WVKEL QR A PNIVIALAGNKADL ++R
Sbjct: 109 QDSFARAKTWVKEL---------------------QRQASPNIVIALAGNKADL-VNKRM 146
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
V+Y E + YA+ENGLLFMETSAKTA+NVN+IF+ I KKLPK E Q R + ++
Sbjct: 147 VDYEEAKQYADENGLLFMETSAKTAVNVNDIFLAIGKKLPKNEGAGQQQNIRPTQNEQSR 206
Query: 246 KTSNCCN 252
+ S CC+
Sbjct: 207 QNSGCCS 213
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 49/57 (85%)
Query: 275 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+NS GG QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 2 ANSPRAGGGAQRPNGATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 58
>gi|355714962|gb|AES05178.1| RAB5B, member RAS oncoprotein family [Mustela putorius furo]
Length = 246
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 134/192 (69%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 77 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 136
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 137 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 174
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN---GQGGRRLVETA 242
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G R V+
Sbjct: 175 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGAAAGRSRGVDLH 234
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 235 EQSQQNKSQCCS 246
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 268 TMANSNNSNSNGRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQ 326
T+++S+N R RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQ
Sbjct: 24 TLSHSHNLAMTSRS--TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQ 81
Query: 327 ESTIGG 332
ESTIG
Sbjct: 82 ESTIGA 87
>gi|351703636|gb|EHB06555.1| Ras-related protein Rab-5B [Heterocephalus glaber]
Length = 215
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 136/192 (70%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETA 242
V+Y E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+
Sbjct: 143 VDYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGVAGRSRGVDLH 202
Query: 243 EAPK--TSNCCN 252
E + S CC+
Sbjct: 203 EQSQQNKSQCCS 214
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|291237556|ref|XP_002738699.1| PREDICTED: RAB5B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 215
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/151 (69%), Positives = 118/151 (78%), Gaps = 22/151 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYD+TNQDTF RAK+W
Sbjct: 54 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDVTNQDTFARAKTW 113
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL QR A PNIVIALAGNKADL ++R VEY E +AYA
Sbjct: 114 VKEL---------------------QRQASPNIVIALAGNKADL-ANKRMVEYEEAQAYA 151
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
E+N LLFMETSAKTAMNVN+IF+ IAKKLPK
Sbjct: 152 EDNSLLFMETSAKTAMNVNDIFLAIAKKLPK 182
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 46/51 (90%), Gaps = 1/51 (1%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
G +QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GNVQRPNG-TQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 54
>gi|410911128|ref|XP_003969042.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 134/190 (70%), Gaps = 27/190 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL S+R V++
Sbjct: 109 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ASKRAVDF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGR-RLVETAEA- 244
+ ++YA++N LLFMETSAKT+MNVNEIF+ IAK+LPK E G GR R V+ EA
Sbjct: 147 QDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKSEPQAAGGSSGRNRGVDLTEAA 206
Query: 245 -PKTSNCCNT 253
P + CC+T
Sbjct: 207 QPAKAPCCST 216
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 280 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|301760474|ref|XP_002916104.1| PREDICTED: ras-related protein Rab-5B-like [Ailuropoda melanoleuca]
gi|281353251|gb|EFB28835.1| hypothetical protein PANDA_004070 [Ailuropoda melanoleuca]
Length = 215
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 134/193 (69%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G G L
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAACRSRGVDLH 202
Query: 240 ETAEAPKTSNCCN 252
E ++ K+ C N
Sbjct: 203 EQSQQNKSQCCSN 215
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|402886385|ref|XP_003906610.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Papio anubis]
gi|402886387|ref|XP_003906611.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Papio anubis]
gi|355564343|gb|EHH20843.1| Ras-related protein Rab-5B [Macaca mulatta]
gi|355786201|gb|EHH66384.1| Ras-related protein Rab-5B [Macaca fascicularis]
gi|380787145|gb|AFE65448.1| ras-related protein Rab-5B isoform 1 [Macaca mulatta]
gi|383410993|gb|AFH28710.1| ras-related protein Rab-5B [Macaca mulatta]
gi|384940030|gb|AFI33620.1| ras-related protein Rab-5B [Macaca mulatta]
Length = 215
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 134/193 (69%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G G L
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGTACRSRGVDLH 202
Query: 240 ETAEAPKTSNCCN 252
E ++ K+ C N
Sbjct: 203 EQSQQNKSQCCSN 215
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|114585675|ref|XP_516319.2| PREDICTED: ras-related protein Rab-5A [Pan troglodytes]
gi|397511743|ref|XP_003826226.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pan paniscus]
gi|410210354|gb|JAA02396.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410263980|gb|JAA19956.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410302036|gb|JAA29618.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410335267|gb|JAA36580.1| RAB5A, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 133/191 (69%), Gaps = 30/191 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN-------GQGGRRLVET 241
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N G+GG L E
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGGVDLTEP 205
Query: 242 AEAPKTSNCCN 252
+ P + CC+
Sbjct: 206 TQ-PTRNQCCS 215
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|431914002|gb|ELK15264.1| Ras-related protein Rab-5B [Pteropus alecto]
Length = 256
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 134/193 (69%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 86 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 145
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 146 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRV 183
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G G L
Sbjct: 184 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAACRSRGVDLH 243
Query: 240 ETAEAPKTSNCCN 252
E ++ K+ C N
Sbjct: 244 EQSQQNKSQCCSN 256
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 268 TMANSNNSNSNGRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQ 326
T+++S+N R RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQ
Sbjct: 33 TLSHSDNLAMTSRS--TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQ 90
Query: 327 ESTIGG 332
ESTIG
Sbjct: 91 ESTIGA 96
>gi|410904529|ref|XP_003965744.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 135/190 (71%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R +++
Sbjct: 109 FVRAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRALDF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
+ ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+G+ G L ETA
Sbjct: 147 QDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQAAGANSGRNRGVDLTETA 206
Query: 243 EAPKTSNCCN 252
+ P + CCN
Sbjct: 207 Q-PTSRTCCN 215
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|320169835|gb|EFW46734.1| RAB5B [Capsaspora owczarzaki ATCC 30864]
Length = 238
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/153 (68%), Positives = 118/153 (77%), Gaps = 22/153 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
+AF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYD+TN DTF RAK+W
Sbjct: 75 SAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDVTNADTFARAKTW 134
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL QR A PNIVIALAGNKADL + +R VEY E AYA
Sbjct: 135 VKEL---------------------QRQASPNIVIALAGNKADL-SVKRVVEYEEAMAYA 172
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
E+NGLLFMETSAKTAMNVNEIF+ IAKKLPK +
Sbjct: 173 EDNGLLFMETSAKTAMNVNEIFLAIAKKLPKTD 205
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/32 (90%), Positives = 32/32 (100%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHE 324
AKICQ+KLVLLGESAVGKSSLVLRFV+GQFH+
Sbjct: 16 AKICQFKLVLLGESAVGKSSLVLRFVKGQFHD 47
>gi|213513268|ref|NP_001133617.1| Ras-related protein Rab-5A [Salmo salar]
gi|197631797|gb|ACH70622.1| member RAS oncogene family [Salmo salar]
gi|209154698|gb|ACI33581.1| Ras-related protein Rab-5A [Salmo salar]
Length = 216
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 136/191 (71%), Gaps = 29/191 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNKES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R +++
Sbjct: 109 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRALDF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
+ ++YA++N LLFMETSAKT+MNVNE+F+ IAKKLPK E N+G+ G L E A
Sbjct: 147 QDAQSYADDNSLLFMETSAKTSMNVNEMFMAIAKKLPKNEPQAEGANSGRNRGVDLTEAA 206
Query: 243 EAPKTSNCCNT 253
+ P + +CC+T
Sbjct: 207 Q-PASRSCCST 216
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 280 RGGRIQRPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RGG RPN T KI Q+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNTGNKISQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|90079481|dbj|BAE89420.1| unnamed protein product [Macaca fascicularis]
Length = 215
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 134/193 (69%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFVRAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G G L
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGTACRSRGVDLH 202
Query: 240 ETAEAPKTSNCCN 252
E ++ K+ C N
Sbjct: 203 EQSQQNKSQCCSN 215
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|74219413|dbj|BAE29485.1| unnamed protein product [Mus musculus]
Length = 215
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 134/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E A
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPA 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PARSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPDTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|403273236|ref|XP_003928426.1| PREDICTED: ras-related protein Rab-5B-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 133/193 (68%), Gaps = 31/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAHAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLV 239
VEY E +AYA++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G G L
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAACRSQGVDLH 202
Query: 240 ETAEAPKTSNCCN 252
E ++ K+ C N
Sbjct: 203 EQSQQNKSQCCSN 215
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|12083645|ref|NP_073183.1| ras-related protein Rab-5A [Rattus norvegicus]
gi|3309068|gb|AAC26004.1| small GTP-binding protein rab5 [Rattus norvegicus]
gi|149027113|gb|EDL82849.1| RAB5A, member RAS oncogene family [Rattus norvegicus]
gi|171847366|gb|AAI61848.1| Rab5a protein [Rattus norvegicus]
Length = 215
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 134/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FSRAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E A
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPA 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PARSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|13385374|ref|NP_080163.1| ras-related protein Rab-5A [Mus musculus]
gi|32171710|sp|Q9CQD1.1|RAB5A_MOUSE RecName: Full=Ras-related protein Rab-5A
gi|12842239|dbj|BAB25527.1| unnamed protein product [Mus musculus]
gi|12845986|dbj|BAB26985.1| unnamed protein product [Mus musculus]
gi|13436026|gb|AAH04842.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|21706419|gb|AAH34370.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|26349503|dbj|BAC38391.1| unnamed protein product [Mus musculus]
gi|66396634|gb|AAH96481.1| Rab5a protein [Mus musculus]
gi|74139798|dbj|BAE31744.1| unnamed protein product [Mus musculus]
gi|74185181|dbj|BAE30082.1| unnamed protein product [Mus musculus]
gi|74198271|dbj|BAE35305.1| unnamed protein product [Mus musculus]
gi|74214066|dbj|BAE29448.1| unnamed protein product [Mus musculus]
gi|74219518|dbj|BAE29531.1| unnamed protein product [Mus musculus]
gi|112292955|dbj|BAF02855.1| Rab5A [Mus musculus]
gi|148691716|gb|EDL23663.1| RAB5A, member RAS oncogene family [Mus musculus]
Length = 215
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 134/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E A
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPA 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PARSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|395835504|ref|XP_003790718.1| PREDICTED: ras-related protein Rab-5B [Otolemur garnettii]
Length = 258
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/182 (61%), Positives = 132/182 (72%), Gaps = 27/182 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITNQ+TF RAK+W
Sbjct: 98 AAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTW 157
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE LQR A P+IVIALAGNKADL ++R VEY E +AYA
Sbjct: 158 VKE---------------------LQRQASPSIVIALAGNKADL-ANKRMVEYEEAQAYA 195
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETAEAPK--TSNC 250
++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G GR R V+ E + S C
Sbjct: 196 DDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQC 255
Query: 251 CN 252
C+
Sbjct: 256 CS 257
>gi|110590632|pdb|2HEI|A Chain A, Crystal Structure Of Human Rab5b In Complex With Gdp
gi|110590633|pdb|2HEI|B Chain B, Crystal Structure Of Human Rab5b In Complex With Gdp
Length = 179
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/159 (65%), Positives = 121/159 (76%), Gaps = 22/159 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITNQ+TF RAK+W
Sbjct: 43 AAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTW 102
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE LQR A P+IVIALAGNKADL ++R VEY E +AYA
Sbjct: 103 VKE---------------------LQRQASPSIVIALAGNKADL-ANKRMVEYEEAQAYA 140
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
++N LLFMETSAKTAMNVN++F+ IAKKLPK E N G
Sbjct: 141 DDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGG 179
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 40/42 (95%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ +KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 2 SASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 43
>gi|112983262|ref|NP_001037614.1| small GTP binding protein RAB5 [Bombyx mori]
gi|99082892|gb|ABF66621.1| small GTP binding protein RAB5 [Bombyx mori]
Length = 213
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 129/179 (72%), Gaps = 26/179 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + DD T++FEIWDTAGQERYH+LAPMYYR AQ+AI+VYDITNQDTFGRAK+W
Sbjct: 57 AAFLTQAIRFDDTTVKFEIWDTAGQERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNW 116
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE LQR A P+IVIALAGNK+DL ++R VE+ E +AYA
Sbjct: 117 VKE---------------------LQRQASPSIVIALAGNKSDL-AAKRMVEFEEAQAYA 154
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE---VNNGQGGRRLVETAEAPKTSNCC 251
+ENGLLFMETSAKTAMNVN+IF+ IA KLPK E GGRRL + E P+ S CC
Sbjct: 155 DENGLLFMETSAKTAMNVNDIFLAIANKLPKSEAGAAGAAGGGRRLAD-GEQPRPSQCC 212
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 46/56 (82%)
Query: 277 SNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ R G QRPN Q K+CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 2 ATNRTGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 57
>gi|291399699|ref|XP_002716250.1| PREDICTED: RAB5A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 215
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 131/190 (68%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N G G L E
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGGNSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PTRSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|395540249|ref|XP_003772070.1| PREDICTED: ras-related protein Rab-5A [Sarcophilus harrisii]
Length = 215
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 133/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PTRSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|126341423|ref|XP_001369723.1| PREDICTED: ras-related protein Rab-5A-like [Monodelphis domestica]
Length = 215
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 133/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL S+R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT++NVNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PTRSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|41393127|ref|NP_958893.1| RAB5A, member RAS oncogene family, a [Danio rerio]
gi|28838709|gb|AAH47803.1| RAB5A, member RAS oncogene family [Danio rerio]
gi|39645921|gb|AAH63966.1| Rab5a protein [Danio rerio]
Length = 216
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 135/190 (71%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQT+CLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 109 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
+ ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+G+ G L ETA
Sbjct: 147 QDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQAAGANSGRSRGVDLTETA 206
Query: 243 EAPKTSNCCN 252
+ P + CC+
Sbjct: 207 Q-PTKAPCCS 215
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 280 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGSNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|392333087|ref|XP_003752788.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
gi|392353206|ref|XP_003751425.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
Length = 215
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 133/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FSRAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT MNVNEIF+ IAKKLPK E N+ +G G L E A
Sbjct: 146 QEAQSYADDNSLLFMETSAKTPMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPA 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PARSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|410902731|ref|XP_003964847.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 220
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 121/163 (74%), Gaps = 25/163 (15%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL ++R
Sbjct: 106 TDTFTRAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
V++ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E
Sbjct: 144 VDHQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 43/53 (81%)
Query: 279 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRGG + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGTTRTNGTAVSNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 55
>gi|354476585|ref|XP_003500505.1| PREDICTED: ras-related protein Rab-5A-like [Cricetulus griseus]
gi|344240325|gb|EGV96428.1| Ras-related protein Rab-5A [Cricetulus griseus]
Length = 215
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 134/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT++NVNEIF+ IAKKLPK E N+ +G G L E A
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPA 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PARSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|149634147|ref|XP_001508982.1| PREDICTED: ras-related protein Rab-5A-like [Ornithorhynchus
anatinus]
Length = 215
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 133/191 (69%), Gaps = 31/191 (16%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQGGRRLVETAE 243
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G R V+ E
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARG--RGVDLTE 203
Query: 244 A--PKTSNCCN 252
P S CC+
Sbjct: 204 HTLPSRSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|432867924|ref|XP_004071340.1| PREDICTED: ras-related protein Rab-5C-like [Oryzias latipes]
Length = 218
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 132/193 (68%), Gaps = 32/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+V+DITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL T++R
Sbjct: 106 TDTFTRAKNWVKEL---------------------QRQASPNIVIALAGNKADL-TNKRN 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRR-------L 238
V++ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E G L
Sbjct: 144 VDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQGGAAAGGRARGGVDL 203
Query: 239 VETAEAPKTSNCC 251
E A ++S CC
Sbjct: 204 QEAAPQGRSSQCC 216
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 43/54 (79%)
Query: 279 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|387017940|gb|AFJ51088.1| ras-related protein Rab-5A-like [Crotalus adamanteus]
Length = 215
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 133/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD TI+FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTIKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT++NVNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNEPQNTGANSSRGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PTKSQCCS 214
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|297671900|ref|XP_002814060.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pongo abelii]
gi|332215304|ref|XP_003256781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Nomascus
leucogenys]
Length = 215
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 133/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PTRSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|319401891|ref|NP_001187496.1| ras-related protein rab-5a [Ictalurus punctatus]
gi|308323159|gb|ADO28716.1| ras-related protein rab-5a [Ictalurus punctatus]
Length = 217
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 131/190 (68%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 50 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 109
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL S+R +++
Sbjct: 110 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRALDF 147
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGRR----LVETA 242
+ ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E GR L ETA
Sbjct: 148 QDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQAPGSSAGRNRGVDLAETA 207
Query: 243 EAPKTSNCCN 252
+ P CC+
Sbjct: 208 Q-PAKGPCCS 216
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 46/56 (82%), Gaps = 3/56 (5%)
Query: 279 GRGGRIQRPNDQTQA--KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN A KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGGAT-RPNGPNAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 57
>gi|225707110|gb|ACO09401.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 219
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 121/163 (74%), Gaps = 25/163 (15%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL ++R
Sbjct: 106 TDTFTRAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
V++ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E
Sbjct: 144 VDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 43/53 (81%)
Query: 279 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRGG + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 55
>gi|50979150|ref|NP_001003317.1| ras-related protein Rab-5A [Canis lupus familiaris]
gi|386781059|ref|NP_001248077.1| ras-related protein Rab-5A [Macaca mulatta]
gi|149729693|ref|XP_001495368.1| PREDICTED: ras-related protein Rab-5A-like [Equus caballus]
gi|296228179|ref|XP_002759690.1| PREDICTED: ras-related protein Rab-5A-like [Callithrix jacchus]
gi|301784142|ref|XP_002927485.1| PREDICTED: ras-related protein Rab-5A-like [Ailuropoda melanoleuca]
gi|395816586|ref|XP_003781781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Otolemur
garnettii]
gi|402861674|ref|XP_003895210.1| PREDICTED: ras-related protein Rab-5A [Papio anubis]
gi|410971499|ref|XP_003992206.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Felis catus]
gi|131794|sp|P18066.1|RAB5A_CANFA RecName: Full=Ras-related protein Rab-5A
gi|47117089|sp|P61271.1|RAB5A_MACFA RecName: Full=Ras-related protein Rab-5A
gi|164056|gb|AAA30889.1| GTP-binding protein (rab5) [Canis lupus familiaris]
gi|14388408|dbj|BAB60752.1| hypothetical protein [Macaca fascicularis]
gi|281349668|gb|EFB25252.1| hypothetical protein PANDA_017269 [Ailuropoda melanoleuca]
gi|351700929|gb|EHB03848.1| Ras-related protein Rab-5A [Heterocephalus glaber]
gi|380787143|gb|AFE65447.1| ras-related protein Rab-5A [Macaca mulatta]
gi|383413157|gb|AFH29792.1| ras-related protein Rab-5A [Macaca mulatta]
gi|384941102|gb|AFI34156.1| ras-related protein Rab-5A [Macaca mulatta]
gi|431917016|gb|ELK16772.1| Ras-related protein Rab-5A [Pteropus alecto]
Length = 215
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 133/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PTRSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|417408714|gb|JAA50897.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 133/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 47 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 106
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 107 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 144
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 145 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPT 204
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 205 Q-PTRSQCCS 213
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 7 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 54
>gi|12832758|dbj|BAB22245.1| unnamed protein product [Mus musculus]
Length = 215
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 134/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKE L+R A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKE---------------------LRRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E A
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPA 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PARSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|170587854|ref|XP_001898689.1| Ras-related protein Rab-5B [Brugia malayi]
gi|158593959|gb|EDP32553.1| Ras-related protein Rab-5B, putative [Brugia malayi]
Length = 217
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/161 (64%), Positives = 121/161 (75%), Gaps = 25/161 (15%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q++F +AK+WVKELQ R A PNIVIAL+GNKADL ++R
Sbjct: 105 QESFAKAKNWVKELQ---------------------RQASPNIVIALSGNKADLA-NKRV 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
VEY E +AYAE+N LLFMETSAKTAMNVN+IF+ IAKKLPK
Sbjct: 143 VEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKLPK 183
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/39 (89%), Positives = 38/39 (97%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 16 SKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 54
>gi|221220906|gb|ACM09114.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 121/163 (74%), Gaps = 25/163 (15%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL ++R
Sbjct: 106 TDTFTRAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
V++ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E
Sbjct: 144 VDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 43/54 (79%)
Query: 279 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|209147261|gb|ACI32882.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 121/163 (74%), Gaps = 25/163 (15%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL ++R
Sbjct: 106 TDTFTRAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
V++ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E
Sbjct: 144 VDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 43/54 (79%)
Query: 279 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGPARTNGAAANNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|312067383|ref|XP_003136717.1| Rab5 [Loa loa]
Length = 221
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 104/161 (64%), Positives = 121/161 (75%), Gaps = 25/161 (15%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q++F +AK+WVKELQ R A PNIVIAL+GNKADL ++R
Sbjct: 105 QESFTKAKNWVKELQ---------------------RQASPNIVIALSGNKADLA-NKRV 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
VEY E +AYAE+N LLFMETSAKTAMNVN+IF+ IAKKLPK
Sbjct: 143 VEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKLPK 183
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 41/52 (78%), Gaps = 5/52 (9%)
Query: 280 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
R G PN K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RSGNTGGPN-----KTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 54
>gi|198426781|ref|XP_002122313.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 217
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/164 (64%), Positives = 122/164 (74%), Gaps = 25/164 (15%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y AAF+TQTVCL D T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLQDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTF RAK+WVKELQ R A PNIVIALAGNKADL +++R
Sbjct: 106 QDTFARAKTWVKELQ---------------------RQASPNIVIALAGNKADL-SNKRM 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV 229
VE+ + +YAEENGLLFMETSAKTAM+VN+IF+ IA+KLPK E
Sbjct: 144 VEHDDAVSYAEENGLLFMETSAKTAMHVNDIFLAIAEKLPKNEA 187
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 44/52 (84%)
Query: 280 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
R G + N TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 4 RTGAPRPANSGTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 55
>gi|355714960|gb|AES05177.1| RAB5A, member RAS oncoprotein family [Mustela putorius furo]
Length = 213
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 133/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 47 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 106
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 107 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 144
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 145 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPT 204
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 205 Q-PTRSQCCS 213
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 7 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 54
>gi|327275534|ref|XP_003222528.1| PREDICTED: ras-related protein Rab-5C-like [Anolis carolinensis]
Length = 216
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 132/192 (68%), Gaps = 30/192 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+CLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTICLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKE LQR A NIVIALAGNKADL S+R
Sbjct: 106 MDTFVRAKNWVKE---------------------LQRQASSNIVIALAGNKADL-GSKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGR-RLVETA 242
V++ E +AYA++N LLFMETSAKTAMNVNE F+ IAKKLPK E G GR R V+
Sbjct: 144 VDFQEAQAYADDNSLLFMETSAKTAMNVNETFMAIAKKLPKNEPQCATGAAGRNRGVDLQ 203
Query: 243 EA--PKTSNCCN 252
E+ P CC+
Sbjct: 204 ESSQPSKGQCCS 215
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 55
>gi|182889996|gb|AAI65915.1| Rab5a protein [Danio rerio]
Length = 216
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 134/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQT+CLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 109 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
+ ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+G+ G L ETA
Sbjct: 147 QDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQAAGANSGRSRGVDLTETA 206
Query: 243 EAPKTSNCCN 252
P + CC+
Sbjct: 207 P-PTKAPCCS 215
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 280 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGSNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|125985719|ref|XP_001356623.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|195147804|ref|XP_002014864.1| GL19400 [Drosophila persimilis]
gi|54644947|gb|EAL33687.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|194106817|gb|EDW28860.1| GL19400 [Drosophila persimilis]
Length = 218
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 130/187 (69%), Gaps = 26/187 (13%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+C++D ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 53 FHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQN 112
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QD+F RAK+WVKE L + A PNIVIALAGNKADL ++ R
Sbjct: 113 QDSFQRAKTWVKE---------------------LHKQASPNIVIALAGNKADL-SNIRV 150
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
VE+ E + YAEENGLLFMETSAKT MNVN+IF+ IAKKLPK + N QGG E
Sbjct: 151 VEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGANNQGGSIRPNGNETN 210
Query: 246 K-TSNCC 251
+ T+NCC
Sbjct: 211 RPTNNCC 217
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
Query: 277 SNGRG-GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
S G G G QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 7 SGGAGSGTAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 62
>gi|115495947|ref|NP_001069654.1| ras-related protein Rab-5A [Bos taurus]
gi|344288083|ref|XP_003415780.1| PREDICTED: ras-related protein Rab-5A-like [Loxodonta africana]
gi|122144200|sp|Q0IIG7.1|RAB5A_BOVIN RecName: Full=Ras-related protein Rab-5A
gi|113911876|gb|AAI22652.1| RAB5A, member RAS oncogene family [Bos taurus]
Length = 215
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 133/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSTRGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PTRSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|355714965|gb|AES05179.1| RAB5C, member RAS oncoprotein family [Mustela putorius furo]
Length = 215
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/150 (69%), Positives = 116/150 (77%), Gaps = 22/150 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DTF RAK+W
Sbjct: 88 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNW 147
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL QR A PNIVIALAGNKADL S+R VE+ E +AYA
Sbjct: 148 VKEL---------------------QRQASPNIVIALAGNKADL-ASKRAVEFQEAQAYA 185
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
++N LLFMETSAKTAMNVNEIF+ IAKKLP
Sbjct: 186 DDNSLLFMETSAKTAMNVNEIFMAIAKKLP 215
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 35 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 88
>gi|41393159|ref|NP_958909.1| ras-related protein Rab-5C [Danio rerio]
gi|28277724|gb|AAH45466.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|41351014|gb|AAH65634.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|182891710|gb|AAI65047.1| Rab5c protein [Danio rerio]
Length = 221
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 131/193 (67%), Gaps = 32/193 (16%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y AAF+TQT+CLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 47 FHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 106
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL ++R
Sbjct: 107 TDTFTRAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRA 144
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRR-------L 238
V++ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E G G L
Sbjct: 145 VDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKSEPQGGAGSGGRARGGVDL 204
Query: 239 VETAEAPKTSNCC 251
ETA ++ CC
Sbjct: 205 QETAPQGRSGQCC 217
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 44/55 (80%), Gaps = 3/55 (5%)
Query: 279 GRGGRIQRPNDQTQA--KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRGG R N KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGPA-RTNGAAPVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 56
>gi|348509081|ref|XP_003442080.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 220
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 122/163 (74%), Gaps = 25/163 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIA+AGNKADL ++R
Sbjct: 106 TDTFTRAKNWVKEL---------------------QRQASPNIVIAIAGNKADL-ANKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
V++ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E
Sbjct: 144 VDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 44/53 (83%)
Query: 279 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRGG + +KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGPARTNGTAASSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 55
>gi|432883290|ref|XP_004074250.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 132/189 (69%), Gaps = 27/189 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R VE+
Sbjct: 109 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRAVEF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGR-RLVETAEA- 244
+ ++YA++N LLFMETSAKT+MNVNEIF+ IAK+LPK E GR R V+ EA
Sbjct: 147 QDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKSEPQAPGATSGRNRGVDLTEAA 206
Query: 245 -PKTSNCCN 252
P + CC+
Sbjct: 207 QPAKAPCCS 215
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 280 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|432910626|ref|XP_004078445.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 133/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R +++
Sbjct: 109 FVRAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRALDF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-VNNGQGGRR-----LVETA 242
+ ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E G G R L ETA
Sbjct: 147 QDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPAAAGASGARNRGVDLTETA 206
Query: 243 EAPKTSNCCN 252
+ P + CC+
Sbjct: 207 Q-PASRPCCS 215
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 280 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|73535746|pdb|1Z07|A Chain A, Gppnhp-Bound Rab5c G55q Mutant Gtpase
Length = 166
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/149 (69%), Positives = 115/149 (77%), Gaps = 22/149 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DTF RAK+W
Sbjct: 40 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKELQ R A PNIVIALAGNKADL S+R VE+ E +AYA
Sbjct: 100 VKELQ---------------------RQASPNIVIALAGNKADLA-SKRAVEFQEAQAYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKL 224
++N LLFMETSAKTAMNVNEIF+ IAKKL
Sbjct: 138 DDNSLLFMETSAKTAMNVNEIFMAIAKKL 166
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/36 (94%), Positives = 36/36 (100%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 330
ICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTI
Sbjct: 3 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 38
>gi|393909277|gb|EFO27359.2| Ras-like protein Rab-5A [Loa loa]
Length = 217
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/161 (64%), Positives = 121/161 (75%), Gaps = 25/161 (15%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q++F +AK+WVKELQ R A PNIVIAL+GNKADL ++R
Sbjct: 105 QESFTKAKNWVKELQ---------------------RQASPNIVIALSGNKADLA-NKRV 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
VEY E +AYAE+N LLFMETSAKTAMNVN+IF+ IAKKLPK
Sbjct: 143 VEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKLPK 183
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 41/52 (78%), Gaps = 5/52 (9%)
Query: 280 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
R G PN K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RSGNTGGPN-----KTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 54
>gi|19923262|ref|NP_004153.2| ras-related protein Rab-5A [Homo sapiens]
gi|426339659|ref|XP_004033761.1| PREDICTED: ras-related protein Rab-5A [Gorilla gorilla gorilla]
gi|1346958|sp|P20339.2|RAB5A_HUMAN RecName: Full=Ras-related protein Rab-5A
gi|20379048|gb|AAM21084.1|AF498936_1 small GTP binding protein RAB5A [Homo sapiens]
gi|27462979|gb|AAO15677.1|AF464088_1 cervical cancer oncogene 10 protein [Homo sapiens]
gi|12654847|gb|AAH01267.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|17390678|gb|AAH18288.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|49168472|emb|CAG38731.1| RAB5A [Homo sapiens]
gi|117644362|emb|CAL37675.1| hypothetical protein [synthetic construct]
gi|117644826|emb|CAL37879.1| hypothetical protein [synthetic construct]
gi|119584705|gb|EAW64301.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584706|gb|EAW64302.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584707|gb|EAW64303.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123981774|gb|ABM82716.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|123996593|gb|ABM85898.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|189069166|dbj|BAG35504.1| unnamed protein product [Homo sapiens]
gi|261860476|dbj|BAI46760.1| RAB5A, member RAS oncogene family [synthetic construct]
Length = 215
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 133/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ P + CC+
Sbjct: 206 Q-PTRNQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|13096181|pdb|1HUQ|A Chain A, 1.8a Crystal Structure Of The Monomeric Gtpase Rab5c
(Mouse)
Length = 164
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/149 (69%), Positives = 115/149 (77%), Gaps = 22/149 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DTF RAK+W
Sbjct: 38 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNW 97
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKELQ R A PNIVIALAGNKADL S+R VE+ E +AYA
Sbjct: 98 VKELQ---------------------RQASPNIVIALAGNKADLA-SKRAVEFQEAQAYA 135
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKL 224
++N LLFMETSAKTAMNVNEIF+ IAKKL
Sbjct: 136 DDNSLLFMETSAKTAMNVNEIFMAIAKKL 164
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/38 (92%), Positives = 37/38 (97%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
ICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 1 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 38
>gi|73535759|pdb|1Z0D|A Chain A, Gdp-bound Rab5c Gtpase
gi|73535760|pdb|1Z0D|C Chain C, Gdp-bound Rab5c Gtpase
Length = 167
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/150 (68%), Positives = 115/150 (76%), Gaps = 22/150 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAG ERYH+LAPMYYR AQAAI+VYDITN DTF RAK+W
Sbjct: 40 AAFLTQTVCLDDTTVKFEIWDTAGLERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKELQ R A PNIVIALAGNKADL S+R VE+ E +AYA
Sbjct: 100 VKELQ---------------------RQASPNIVIALAGNKADLA-SKRAVEFQEAQAYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
++N LLFMETSAKTAMNVNEIF+ IAKKLP
Sbjct: 138 DDNSLLFMETSAKTAMNVNEIFMAIAKKLP 167
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/38 (92%), Positives = 37/38 (97%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
ICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 40
>gi|327274891|ref|XP_003222209.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Anolis
carolinensis]
gi|327274893|ref|XP_003222210.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Anolis
carolinensis]
Length = 215
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 129/190 (67%), Gaps = 28/190 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLVETA 242
+ ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N G L E
Sbjct: 146 QDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNTGANSVRGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ K+ C N
Sbjct: 206 QQTKSQCCSN 215
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|308321755|gb|ADO28020.1| ras-related protein rab-5a [Ictalurus furcatus]
Length = 217
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 130/190 (68%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 50 FQESTIGGAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 109
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL S+R +++
Sbjct: 110 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ASKRALDF 147
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGRR----LVETA 242
+ ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E GR L ETA
Sbjct: 148 QDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQAPGSSAGRNRGVDLAETA 207
Query: 243 EAPKTSNCCN 252
+ P CC+
Sbjct: 208 Q-PAKGPCCS 216
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 47/56 (83%), Gaps = 3/56 (5%)
Query: 279 GRGGRIQRPNDQTQA--KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN A KICQ+KLVLLGESAVGKSSL+LRFV+GQFHE+QESTIGG
Sbjct: 3 GRGGAT-RPNGPNAASNKICQFKLVLLGESAVGKSSLMLRFVKGQFHEFQESTIGG 57
>gi|417397259|gb|JAA45663.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 215
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 132/190 (69%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ I KKLPK E N+ +G G L E
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIGKKLPKNEPQNPGANSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PTRSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|240849221|ref|NP_001155353.1| ras-related protein Rab-5A [Ovis aries]
gi|238566829|gb|ACR46638.1| RAB5A [Ovis aries]
Length = 215
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 130/190 (68%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N G L E
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAIPPRGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PTRSQCCS 214
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|17736973|ref|NP_523457.1| Rab5, isoform E [Drosophila melanogaster]
gi|24581101|ref|NP_722795.1| Rab5, isoform A [Drosophila melanogaster]
gi|24581103|ref|NP_722796.1| Rab5, isoform B [Drosophila melanogaster]
gi|24581105|ref|NP_722797.1| Rab5, isoform C [Drosophila melanogaster]
gi|24581107|ref|NP_722798.1| Rab5, isoform D [Drosophila melanogaster]
gi|24581110|ref|NP_722799.1| Rab5, isoform F [Drosophila melanogaster]
gi|442625421|ref|NP_001259925.1| Rab5, isoform G [Drosophila melanogaster]
gi|442625423|ref|NP_001259926.1| Rab5, isoform H [Drosophila melanogaster]
gi|442625425|ref|NP_001259927.1| Rab5, isoform I [Drosophila melanogaster]
gi|194854678|ref|XP_001968400.1| GG24527 [Drosophila erecta]
gi|195341957|ref|XP_002037568.1| GM18235 [Drosophila sechellia]
gi|195470737|ref|XP_002087663.1| GE15124 [Drosophila yakuba]
gi|195576007|ref|XP_002077868.1| GD22841 [Drosophila simulans]
gi|6517198|dbj|BAA87879.1| Drab5 [Drosophila melanogaster]
gi|6561903|dbj|BAA88244.1| Rab5 protein [Drosophila melanogaster]
gi|7295967|gb|AAF51265.1| Rab5, isoform A [Drosophila melanogaster]
gi|16648234|gb|AAL25382.1| GH24702p [Drosophila melanogaster]
gi|22945400|gb|AAN10422.1| Rab5, isoform B [Drosophila melanogaster]
gi|22945401|gb|AAN10423.1| Rab5, isoform C [Drosophila melanogaster]
gi|22945402|gb|AAN10424.1| Rab5, isoform D [Drosophila melanogaster]
gi|22945403|gb|AAN10425.1| Rab5, isoform E [Drosophila melanogaster]
gi|22945404|gb|AAN10426.1| Rab5, isoform F [Drosophila melanogaster]
gi|27227445|gb|AAN85552.1| Rab5 [Drosophila melanogaster]
gi|27227447|gb|AAN85553.1| Rab5 [Drosophila melanogaster]
gi|51477136|tpg|DAA01061.1| TPA_exp: Rab5 [Drosophila melanogaster]
gi|190660267|gb|EDV57459.1| GG24527 [Drosophila erecta]
gi|194132418|gb|EDW53986.1| GM18235 [Drosophila sechellia]
gi|194173764|gb|EDW87375.1| GE15124 [Drosophila yakuba]
gi|194189877|gb|EDX03453.1| GD22841 [Drosophila simulans]
gi|220945650|gb|ACL85368.1| Rab5-PA [synthetic construct]
gi|220955442|gb|ACL90264.1| Rab5-PA [synthetic construct]
gi|440213189|gb|AGB92462.1| Rab5, isoform G [Drosophila melanogaster]
gi|440213190|gb|AGB92463.1| Rab5, isoform H [Drosophila melanogaster]
gi|440213191|gb|AGB92464.1| Rab5, isoform I [Drosophila melanogaster]
Length = 219
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 129/187 (68%), Gaps = 26/187 (13%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+C++D ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 54 FHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQN 113
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QD+F RAK+WVKE L + A PNIVIALAGNKADL ++ R
Sbjct: 114 QDSFQRAKTWVKE---------------------LHKQASPNIVIALAGNKADL-SNIRV 151
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR-RLVETAEA 244
VE+ E + YAEENGLLFMETSAKT MNVN+IF+ IAKKLPK + N QG R T
Sbjct: 152 VEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGANNQGTSIRPTGTETN 211
Query: 245 PKTSNCC 251
T+NCC
Sbjct: 212 RPTNNCC 218
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 48/63 (76%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
MA + S G QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQES
Sbjct: 1 MATTPRSGGASGTGTAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQES 60
Query: 329 TIG 331
TIG
Sbjct: 61 TIG 63
>gi|178056558|ref|NP_001116652.1| ras-related protein Rab-5A [Sus scrofa]
gi|122131883|sp|Q06AU6.1|RAB5A_PIG RecName: Full=Ras-related protein Rab-5A
gi|115394760|gb|ABI97174.1| RAB5A [Sus scrofa]
Length = 215
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 133/190 (70%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E +N +G G L E
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGINCTRGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PTRSQCCS 214
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|348513153|ref|XP_003444107.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis niloticus]
Length = 216
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 131/190 (68%), Gaps = 28/190 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 109 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
+ ++YA++N LLFMETSAKT+MNVNEIF+ IAK+LPK E N G+ G L E A
Sbjct: 147 QDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKNEPQPAGANTGRSRGVDLTEAA 206
Query: 243 EAPKTSNCCN 252
+ K C N
Sbjct: 207 QPAKAPCCSN 216
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 280 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|550070|gb|AAA60245.1| GTP-binding protein [Homo sapiens]
Length = 215
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 130/189 (68%), Gaps = 27/189 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQE YH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQEGYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQGGRRLVETAE 243
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +GG +
Sbjct: 146 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGGGVDLTEPT 205
Query: 244 APKTSNCCN 252
P + CC+
Sbjct: 206 QPTRNQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|339252708|ref|XP_003371577.1| GTP-binding protein Ypt5 [Trichinella spiralis]
gi|316968152|gb|EFV52478.1| GTP-binding protein Ypt5 [Trichinella spiralis]
Length = 232
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 135/191 (70%), Gaps = 30/191 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVC+DD+T++FEIWDTAGQERY +LAPMYYR A+AAI+VYDITNQ +
Sbjct: 63 FQESTIGAAFLTQTVCMDDMTVKFEIWDTAGQERYQSLAPMYYRAARAAIVVYDITNQKS 122
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F +AK+WV EL QR A PNIVIALAGNKADL +SR+ VE+
Sbjct: 123 FTKAKNWVNEL---------------------QRQALPNIVIALAGNKADLASSRK-VEF 160
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG---QGGRRLVETAEAP 245
+E +AYAEENGLLFMETSAKTAMNVN+IF IAK+LPK E +G G+++V+ +++
Sbjct: 161 NEAQAYAEENGLLFMETSAKTAMNVNDIFWAIAKELPKTEAASGGLSGAGKQVVDLSKSD 220
Query: 246 K-----TSNCC 251
+ +CC
Sbjct: 221 QRGGTAMGSCC 231
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 49/76 (64%), Gaps = 8/76 (10%)
Query: 275 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE- 333
S+ + R G RPN K CQ+KLVLLGESAVGKSSLVLRF +GQFHE+QESTIG
Sbjct: 15 SDMSSRTG--NRPNGMNANKTCQFKLVLLGESAVGKSSLVLRFAKGQFHEFQESTIGAAF 72
Query: 334 -----CQSSHSISFSM 344
C ++ F +
Sbjct: 73 LTQTVCMDDMTVKFEI 88
>gi|440896494|gb|ELR48410.1| Ras-related protein Rab-5A, partial [Bos grunniens mutus]
Length = 218
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 129/190 (67%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 51 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 110
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 111 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 148
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG------GRRLVETA 242
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E N G L E
Sbjct: 149 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQNPGAHSTRGRGVDLTEPT 208
Query: 243 EAPKTSNCCN 252
+ P CC+
Sbjct: 209 Q-PARGQCCS 217
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 48/66 (72%), Gaps = 9/66 (13%)
Query: 267 LTMANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQ 326
L MAN + NG PN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+Q
Sbjct: 2 LDMANRGATRPNG-------PN--TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQ 52
Query: 327 ESTIGG 332
ESTIG
Sbjct: 53 ESTIGA 58
>gi|348511330|ref|XP_003443197.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis niloticus]
Length = 216
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 108/189 (57%), Positives = 131/189 (69%), Gaps = 29/189 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R +++
Sbjct: 109 FVRAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRALDF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGRR----LVETA 242
+ ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK E GR L ETA
Sbjct: 147 QDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQATGASTGRNRGVDLTETA 206
Query: 243 EAPKTSNCC 251
+ P + CC
Sbjct: 207 Q-PTSRPCC 214
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 280 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|26354324|dbj|BAC40790.1| unnamed protein product [Mus musculus]
Length = 234
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 129/201 (64%), Gaps = 46/201 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DTF RAK+W
Sbjct: 56 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNW 115
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY------- 188
VKEL QR A PNIVIALAGNKADL S+R VE+
Sbjct: 116 VKEL---------------------QRQASPNIVIALAGNKADL-ASKRAVEFQPCHLPC 153
Query: 189 -----------SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--- 234
E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G
Sbjct: 154 SPPTLFLTCLSQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPG 213
Query: 235 ---GRRLVETAEAPKTSNCCN 252
G L E+ A ++ C N
Sbjct: 214 RTRGVDLQESNPASRSQCCSN 234
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|193606029|ref|XP_001944241.1| PREDICTED: ras-related protein Rab-5C-like [Acyrthosiphon pisum]
Length = 211
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 130/188 (69%), Gaps = 27/188 (14%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+ L+DV ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTIHLNDVAVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTF RAK+WVKE LQR A P IVIALAGNK DL T R
Sbjct: 105 QDTFERAKNWVKE---------------------LQRQATPGIVIALAGNKLDLNT-MRS 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG-GRRLVETAEA 244
V+ E + YA ENGLLFMETSAKT+ NV EIF IA+KLPK E N G GRRLVE+ A
Sbjct: 143 VQTDESQTYAYENGLLFMETSAKTSANVTEIFKAIAEKLPKNETTNTAGQGRRLVESEGA 202
Query: 245 PKT-SNCC 251
K+ S+CC
Sbjct: 203 NKSLSSCC 210
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 285 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
QRPN QT KICQ+KLVLLGES+VGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 QRPNGQTPGKICQFKLVLLGESSVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|209156126|gb|ACI34295.1| Ras-related protein Rab-5C [Salmo salar]
Length = 220
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/153 (67%), Positives = 118/153 (77%), Gaps = 22/153 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+DTF RAK+W
Sbjct: 56 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNRDTFTRAKNW 115
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL QR A PNIVIALAGNKAD+ ++R V+ E +AYA
Sbjct: 116 VKEL---------------------QRQASPNIVIALAGNKADV-ANKRAVDLQEAQAYA 153
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
++N LLFMETSAKTAMNVNEIF+ IAKKLPK E
Sbjct: 154 DDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQF EYQESTIG
Sbjct: 3 GRGGPA-RPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIG 55
>gi|225708202|gb|ACO09947.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 220
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 131/193 (67%), Gaps = 32/193 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 46 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 105
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKAD+ ++R
Sbjct: 106 TDTFTRAKNWVKEL---------------------QRQASPNIVIALAGNKADI-ANKRA 143
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG-------GRRL 238
++ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E G G G L
Sbjct: 144 IDQQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQGGAGTGGRTRPGVDL 203
Query: 239 VETAEAPKTSNCC 251
E A ++ CC
Sbjct: 204 QEPAPQGRSGQCC 216
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGPA-RPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 55
>gi|355560060|gb|EHH16788.1| hypothetical protein EGK_12135 [Macaca mulatta]
Length = 215
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 132/190 (69%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQA I+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAVIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YA++N LLFM+TSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 146 QEAQSYADDNSLLFMKTSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PTRSQCCS 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|71896201|ref|NP_001025576.1| muscle RAS oncogene homolog isoform 2 [Xenopus (Silurana)
tropicalis]
gi|309243097|ref|NP_001184079.1| muscle RAS oncogene homolog isoform 1 [Xenopus (Silurana)
tropicalis]
gi|60552032|gb|AAH91014.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
gi|89272803|emb|CAJ82337.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|115292132|gb|AAI21995.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
Length = 213
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 125/187 (66%), Gaps = 26/187 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+ Q+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+V+DIT +T
Sbjct: 47 FQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPET 106
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNK+DL +R VEY
Sbjct: 107 FDRAKAWVKEL---------------------QRQASPNIVIALAGNKSDL-AEKRMVEY 144
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRR----LVETAEA 244
E +AYAE+ GLLFMETSAKTAMNVNE+F+ IAKK+PK + N R V+ +E
Sbjct: 145 EEAQAYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKSDAQNPTHAARNRGVNVQGSEQ 204
Query: 245 PKTSNCC 251
S CC
Sbjct: 205 QPRSGCC 211
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 45/64 (70%), Gaps = 10/64 (15%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
MAN + +NG G Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+
Sbjct: 1 MANRGSLRANGVG----------QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQET 50
Query: 329 TIGG 332
TIG
Sbjct: 51 TIGA 54
>gi|194759664|ref|XP_001962067.1| GF15280 [Drosophila ananassae]
gi|190615764|gb|EDV31288.1| GF15280 [Drosophila ananassae]
Length = 219
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 129/187 (68%), Gaps = 26/187 (13%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+C++D ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 54 FHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQN 113
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QD+F RAK+WVKE L + A PNIVIALAGNKADL ++ R
Sbjct: 114 QDSFQRAKTWVKE---------------------LHKQASPNIVIALAGNKADL-SNIRV 151
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
VE+ E + YAEENGLLFMETSAKT MNVN+IF+ IAKKLPK + N QG E
Sbjct: 152 VEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGANNQGTSIRPNGNETN 211
Query: 246 K-TSNCC 251
+ T+NCC
Sbjct: 212 RPTNNCC 218
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 48/63 (76%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
MA S + G QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQES
Sbjct: 1 MATSPRTGGASGAGTAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQES 60
Query: 329 TIG 331
TIG
Sbjct: 61 TIG 63
>gi|41055758|ref|NP_957264.1| RAB5A, member RAS oncogene family, b [Danio rerio]
gi|29124637|gb|AAH49057.1| RAB5A, member RAS oncogene family like [Danio rerio]
Length = 216
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 133/191 (69%), Gaps = 29/191 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQT+CLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R +++
Sbjct: 109 FARAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRALDF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
+ ++YA++N LLFMETSAKT+MNV+EIF+ IAKKLPK E N + G L ETA
Sbjct: 147 QDAQSYADDNSLLFMETSAKTSMNVSEIFMAIAKKLPKNEPQPAGANTARNRGVDLTETA 206
Query: 243 EAPKTSNCCNT 253
+ P CC+T
Sbjct: 207 Q-PAKGPCCST 216
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGGAT-RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|348588935|ref|XP_003480220.1| PREDICTED: ras-related protein Rab-5A-like [Cavia porcellus]
Length = 215
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 131/190 (68%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F + F TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGSCFSTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E ++YAE+N LLFMETSAKT+MNVNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 146 QEAQSYAEDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
+ P S CC+
Sbjct: 206 Q-PTRSQCCS 214
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 47/56 (83%), Gaps = 2/56 (3%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSI 340
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG C S+ ++
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGS-CFSTQTV 62
>gi|47086269|ref|NP_998050.1| ras-related protein Rab-5B [Danio rerio]
gi|42744592|gb|AAH66634.1| RAB5B, member RAS oncogene family [Danio rerio]
Length = 214
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 125/187 (66%), Gaps = 26/187 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+ Q+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+V+DIT +T
Sbjct: 48 FQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPET 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL +R VEY
Sbjct: 108 FERAKAWVKEL---------------------QRQASPNIVIALAGNKADL-ADKRLVEY 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRL----VETAEA 244
E + YAE+ GLLFMETSAKTAMNVNE+F+ IAKK+PK + N R ++ +A
Sbjct: 146 EEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKTDTQNPTHAARHRGVNLQDPDA 205
Query: 245 PKTSNCC 251
T +CC
Sbjct: 206 QSTRSCC 212
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 292 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+TIG
Sbjct: 15 QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGA 55
>gi|148670589|gb|EDL02536.1| RAB5C, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 270
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 129/201 (64%), Gaps = 46/201 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DTF RAK+W
Sbjct: 92 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNW 151
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY------- 188
VKEL QR A PNIVIALAGNKADL S+R VE+
Sbjct: 152 VKEL---------------------QRQASPNIVIALAGNKADL-ASKRAVEFQPCHLPC 189
Query: 189 -----------SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--- 234
E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E N G
Sbjct: 190 SPPTLFLTCLSQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPG 249
Query: 235 ---GRRLVETAEAPKTSNCCN 252
G L E+ A ++ C N
Sbjct: 250 RTRGVDLQESNPASRSQCCSN 270
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 39 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 92
>gi|195433707|ref|XP_002064849.1| GK14984 [Drosophila willistoni]
gi|194160934|gb|EDW75835.1| GK14984 [Drosophila willistoni]
Length = 220
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 129/187 (68%), Gaps = 26/187 (13%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+C++D ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 54 FHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQN 113
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QD+F RAK+WVKE L + A PNIVIALAGNKADL ++ R
Sbjct: 114 QDSFQRAKTWVKE---------------------LHKQASPNIVIALAGNKADL-SNIRV 151
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
VE+ E + YAEENGLLFMETSAKT MNVN+IF+ IAKKLPK + N QG E
Sbjct: 152 VEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGANNQGTSIRPNGNETN 211
Query: 246 K-TSNCC 251
+ T+NCC
Sbjct: 212 RPTNNCC 218
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 285 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 17 QRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 64
>gi|348537690|ref|XP_003456326.1| PREDICTED: ras-related protein Rab-5B-like [Oreochromis niloticus]
Length = 216
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 124/187 (66%), Gaps = 26/187 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+ Q+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+V+DIT +T
Sbjct: 49 FQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPET 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL +R VEY
Sbjct: 109 FERAKAWVKEL---------------------QRQASPNIVIALAGNKADL-AEKRLVEY 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRL----VETAEA 244
E + YAE+ GLLFMETSAKTAMNVNE+F+ IAKK+PK + N R ++ +A
Sbjct: 147 EEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKTDTQNPTHAARHRGVNLQDPDA 206
Query: 245 PKTSNCC 251
T CC
Sbjct: 207 HSTRACC 213
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
Query: 276 NSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+S G GGR TQ KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+TIG
Sbjct: 2 SSRGSGGRSN--GTLTQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGA 56
>gi|119393795|gb|ABL74413.1| Rab5 [Anopheles gambiae]
Length = 213
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/186 (57%), Positives = 126/186 (67%), Gaps = 25/186 (13%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+C+DD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 49 FHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQN 108
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
D+F RAK+WVKEL QR A PNIVIALAGNKADL S R
Sbjct: 109 SDSFARAKTWVKEL---------------------QRQASPNIVIALAGNKADLANS-RV 146
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
V+Y E + YA++N LLFMETSAKTA+NVN+IF+ IAKKLPK E Q R +
Sbjct: 147 VDYEEAKQYADDNRLLFMETSAKTAVNVNDIFLAIAKKLPKNEGAGPQQNIRPTQNETNR 206
Query: 246 KTSNCC 251
+ S CC
Sbjct: 207 QNSGCC 212
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 46/52 (88%)
Query: 281 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GG QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 GGAAQRPNGATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 59
>gi|47218843|emb|CAG02828.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 133/221 (60%), Gaps = 60/221 (27%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 38 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 97
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RAK+WVKEL QR A PNIVIALAGNKADL ++R
Sbjct: 98 TDTFTRAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRA 135
Query: 186 VE----------------------------YSEGEAYAEENGLLFMETSAKTAMNVNEIF 217
V+ Y E +AYA++N LLFMETSAKTAMNVNEIF
Sbjct: 136 VDHQVWRSSSGHTGKRALPQTSNASVFFMLYQEAQAYADDNSLLFMETSAKTAMNVNEIF 195
Query: 218 VEIAKKLPKKEVNNG-------QGGRRLVETAEAPKTSNCC 251
+ IAKKLPK E G +GG L E A ++ CC
Sbjct: 196 MAIAKKLPKNEPQGGPSAGGRARGGVDLQEAAPQGRSGQCC 236
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/38 (94%), Positives = 38/38 (100%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 10 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 47
>gi|195387317|ref|XP_002052342.1| GJ22226 [Drosophila virilis]
gi|194148799|gb|EDW64497.1| GJ22226 [Drosophila virilis]
Length = 216
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 129/190 (67%), Gaps = 34/190 (17%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+C++D ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 53 FHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQN 112
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QD+F RAK+WVKE L + A PNIVIALAGNKADL ++ R
Sbjct: 113 QDSFQRAKTWVKE---------------------LHKQASPNIVIALAGNKADL-SNIRV 150
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ----GGRRLVET 241
VE+ E + YAEENGLLFMETSAKT MNVN+IF+ IAKKLPK + N G G +T
Sbjct: 151 VEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDNNQGSVIKPNGNEPTQT 210
Query: 242 AEAPKTSNCC 251
T+NCC
Sbjct: 211 -----TNNCC 215
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
MA + S +G G QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQES
Sbjct: 1 MATTPRSGGSGSGA-AQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQES 59
Query: 329 TIG 331
TIG
Sbjct: 60 TIG 62
>gi|195052912|ref|XP_001993394.1| GH13785 [Drosophila grimshawi]
gi|193900453|gb|EDV99319.1| GH13785 [Drosophila grimshawi]
Length = 216
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 129/190 (67%), Gaps = 34/190 (17%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+C++D ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 53 FHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQN 112
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QD+F RAK+WVKE L + A PNIVIALAGNKADL ++ R
Sbjct: 113 QDSFQRAKTWVKE---------------------LHKQASPNIVIALAGNKADL-SNIRV 150
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ----GGRRLVET 241
VE+ E + YAEENGLLFMETSAKT MNVN+IF+ IAKKLPK + N G G +T
Sbjct: 151 VEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDNNQGSVIKPNGNEPTQT 210
Query: 242 AEAPKTSNCC 251
T+NCC
Sbjct: 211 -----TNNCC 215
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
Query: 266 ILTMANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 325
+ T S SNS G QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEY
Sbjct: 1 MATTPRSGGSNS----GAAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEY 56
Query: 326 QESTIGG 332
QESTIG
Sbjct: 57 QESTIGA 63
>gi|27066018|pdb|1N6O|A Chain A, Crystal Structure Of Human Rab5a A30k Mutant Complex With
Gppnhp
Length = 170
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/158 (62%), Positives = 119/158 (75%), Gaps = 22/158 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 34 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 93
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKELQ R A PNIVIAL+GNKADL ++R V++
Sbjct: 94 FARAKNWVKELQ---------------------RQASPNIVIALSGNKADLA-NKRAVDF 131
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK
Sbjct: 132 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/39 (87%), Positives = 37/39 (94%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KICQ+KLVLLGES VGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 KICQFKLVLLGESKVGKSSLVLRFVKGQFHEFQESTIGA 41
>gi|324522951|gb|ADY48161.1| Ras-related protein Rab-5B [Ascaris suum]
Length = 217
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 122/161 (75%), Gaps = 25/161 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLD+ T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDIT+
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDETTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITS 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q++F +AK+WVKELQ R A PNIVIAL+GNKADL ++R
Sbjct: 105 QESFAKAKNWVKELQ---------------------RQASPNIVIALSGNKADL-ANKRV 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
VEY E +AYA++N LLFMETSAKTAMNVN+IF+ IAKKLPK
Sbjct: 143 VEYEEAQAYADDNALLFMETSAKTAMNVNDIFLAIAKKLPK 183
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 43/58 (74%), Gaps = 5/58 (8%)
Query: 275 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ S R G P+ K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 ARSTARAGNGGAPS-----KTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|27066008|pdb|1N6H|A Chain A, Crystal Structure Of Human Rab5a
gi|40889551|pdb|1R2Q|A Chain A, Crystal Structure Of Human Rab5a Gtpase Domain At 1.05 A
Resolution
Length = 170
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/158 (62%), Positives = 119/158 (75%), Gaps = 22/158 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 34 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 93
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKELQ R A PNIVIAL+GNKADL ++R V++
Sbjct: 94 FARAKNWVKELQ---------------------RQASPNIVIALSGNKADLA-NKRAVDF 131
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK
Sbjct: 132 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/39 (89%), Positives = 38/39 (97%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 41
>gi|55670031|pdb|1TU3|A Chain A, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670032|pdb|1TU3|B Chain B, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670033|pdb|1TU3|C Chain C, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670034|pdb|1TU3|D Chain D, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670035|pdb|1TU3|E Chain E, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
Length = 171
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/158 (62%), Positives = 119/158 (75%), Gaps = 22/158 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 35 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 94
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKELQ R A PNIVIAL+GNKADL ++R V++
Sbjct: 95 FARAKNWVKELQ---------------------RQASPNIVIALSGNKADLA-NKRAVDF 132
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK
Sbjct: 133 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 170
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/39 (89%), Positives = 38/39 (97%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 42
>gi|27066016|pdb|1N6N|A Chain A, Crystal Structure Of Human Rab5a A30r Mutant Complex With
Gppnhp
Length = 170
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/158 (62%), Positives = 119/158 (75%), Gaps = 22/158 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 34 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 93
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKELQ R A PNIVIAL+GNKADL ++R V++
Sbjct: 94 FARAKNWVKELQ---------------------RQASPNIVIALSGNKADLA-NKRAVDF 131
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK
Sbjct: 132 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/39 (87%), Positives = 37/39 (94%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KICQ+KLVLLGES VGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 KICQFKLVLLGESRVGKSSLVLRFVKGQFHEFQESTIGA 41
>gi|27066021|pdb|1N6R|A Chain A, Crystal Structure Of Human Rab5a A30l Mutant Complex With
Gppnhp
Length = 170
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 118/151 (78%), Gaps = 22/151 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++F RAK+W
Sbjct: 41 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNW 100
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKELQ R A PNIVIAL+GNKADL ++R V++ E ++YA
Sbjct: 101 VKELQ---------------------RQASPNIVIALSGNKADLA-NKRAVDFQEAQSYA 138
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
++N LLFMETSAKT+MNVNEIF+ IAKKLPK
Sbjct: 139 DDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/39 (87%), Positives = 37/39 (94%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KICQ+KLVLLGES VGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 KICQFKLVLLGESLVGKSSLVLRFVKGQFHEFQESTIGA 41
>gi|27066019|pdb|1N6P|A Chain A, Crystal Structure Of Human Rab5a A30e Mutant Complex With
Gppnhp
Length = 170
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/158 (62%), Positives = 119/158 (75%), Gaps = 22/158 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 34 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 93
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKELQ R A PNIVIAL+GNKADL ++R V++
Sbjct: 94 FARAKNWVKELQ---------------------RQASPNIVIALSGNKADLA-NKRAVDF 131
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK
Sbjct: 132 QEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/39 (87%), Positives = 37/39 (94%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KICQ+KLVLLGES VGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 KICQFKLVLLGESEVGKSSLVLRFVKGQFHEFQESTIGA 41
>gi|62740107|gb|AAH94134.1| Unknown (protein for MGC:115056) [Xenopus laevis]
Length = 213
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 125/180 (69%), Gaps = 26/180 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+ Q+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+V+DIT +TF RAK+W
Sbjct: 54 AAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAW 113
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL QR A PNIVIALAGNK+DL +R VEY E + YA
Sbjct: 114 VKEL---------------------QRQASPNIVIALAGNKSDL-AEKRMVEYEEAQTYA 151
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN---GQGGRRL-VETAEAPKTSNCC 251
E+ GLLFMETSAKTAMNVNE+F+ IAKK+PK + N G R + V+ +E S CC
Sbjct: 152 EDTGLLFMETSAKTAMNVNELFLAIAKKMPKSDAQNPTHGAHNRGVNVQGSEQQPRSGCC 211
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 10/63 (15%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
MAN ++ +NG G Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF EYQE+
Sbjct: 1 MANRGSTRANGVG----------QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEYQET 50
Query: 329 TIG 331
TIG
Sbjct: 51 TIG 53
>gi|195115058|ref|XP_002002084.1| GI17188 [Drosophila mojavensis]
gi|193912659|gb|EDW11526.1| GI17188 [Drosophila mojavensis]
Length = 216
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 129/190 (67%), Gaps = 34/190 (17%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+C++D ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 53 FHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQN 112
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QD+F RAK+WVKE L + A PNIVIALAGNKADL ++ R
Sbjct: 113 QDSFQRAKTWVKE---------------------LHKQASPNIVIALAGNKADL-SNIRV 150
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ----GGRRLVET 241
VE+ E + YAEENGLLFMETSAKT MNVN+IF+ IAKKLPK + N G G +T
Sbjct: 151 VEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDNNPGTVIKPNGNESTQT 210
Query: 242 AEAPKTSNCC 251
T+NCC
Sbjct: 211 -----TNNCC 215
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 44/51 (86%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
G QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 13 GAAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 63
>gi|27066009|pdb|1N6I|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gdp
gi|27066010|pdb|1N6K|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gdp And Aluminum Fluoride
gi|27066012|pdb|1N6L|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gtp
Length = 170
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 118/151 (78%), Gaps = 22/151 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++F RAK+W
Sbjct: 41 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNW 100
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL QR A PNIVIAL+GNKADL ++R V++ E ++YA
Sbjct: 101 VKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDFQEAQSYA 138
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
++N LLFMETSAKT+MNVNEIF+ IAKKLPK
Sbjct: 139 DDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/39 (87%), Positives = 37/39 (94%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KICQ+KLVLLGES VGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 KICQFKLVLLGESPVGKSSLVLRFVKGQFHEFQESTIGA 41
>gi|47229414|emb|CAF99402.1| unnamed protein product [Tetraodon nigroviridis]
Length = 230
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 130/204 (63%), Gaps = 42/204 (20%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL S+R V++
Sbjct: 109 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ASKRAVDF 146
Query: 189 --------------SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
+ ++YA++N LLFMETSAKT+MNVNEIF+ IAK+LPK E G
Sbjct: 147 QVSADELLLGQKTEQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKSEPQAAGG 206
Query: 235 ------GRRLVETAEAPKTSNCCN 252
G L E A+ K S C N
Sbjct: 207 SSVRNRGVDLTEAAQPAKASCCSN 230
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 280 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|167538218|ref|XP_001750774.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770691|gb|EDQ84373.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 125/186 (67%), Gaps = 25/186 (13%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTV +DDVT++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 40 FHEYQESTIGAAFLTQTVAVDDVTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
DTF RA+SWVKEL QR A PNIVIALAGNKADL S++
Sbjct: 100 ADTFQRARSWVKEL---------------------QRQANPNIVIALAGNKADL-ASKQQ 137
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
V+ +E AYAEENGLLFMETSAK AMNV EIF+ IAKKLPK +G V
Sbjct: 138 VDTNEARAYAEENGLLFMETSAKNAMNVTEIFMAIAKKLPKNTQPGPRGDTLKVADDGKK 197
Query: 246 KTSNCC 251
+ CC
Sbjct: 198 QGGGCC 203
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/39 (89%), Positives = 37/39 (94%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 12 KSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 50
>gi|17506899|ref|NP_492481.1| Protein RAB-5 [Caenorhabditis elegans]
gi|3876435|emb|CAB04205.1| Protein RAB-5 [Caenorhabditis elegans]
Length = 208
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 127/186 (68%), Gaps = 25/186 (13%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD TI+FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 44 FHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 103
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q++F +AK+WVKEL QR A PNIV+ALAGNKAD+ ++R
Sbjct: 104 QESFQKAKNWVKEL---------------------QRQASPNIVMALAGNKADV-ANKRT 141
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
VEY E AYAE+N LLFMETSAKT+MNVN+IF+ IAKKLP G + +
Sbjct: 142 VEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLPIGPAQGEPTGTVDMNQPQQQ 201
Query: 246 KTSNCC 251
+ +CC
Sbjct: 202 QKGSCC 207
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 6/57 (10%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE------CQSSHSISFSM 344
+ CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG C +I F +
Sbjct: 16 RTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEI 72
>gi|308485680|ref|XP_003105038.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|308256983|gb|EFP00936.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|341880645|gb|EGT36580.1| CBN-RAB-5 protein [Caenorhabditis brenneri]
gi|341900137|gb|EGT56072.1| hypothetical protein CAEBREN_25822 [Caenorhabditis brenneri]
Length = 209
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 123/176 (69%), Gaps = 22/176 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD TI+FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITNQ++F +AK+W
Sbjct: 55 AAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNW 114
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL QR A PNIV+ALAGNKAD+ ++R VEY E AYA
Sbjct: 115 VKEL---------------------QRQASPNIVMALAGNKADV-ANKRTVEYEEANAYA 152
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
E+N LLFMETSAKT+MNVN+IF+ IAKKLP G + + + +CC
Sbjct: 153 EDNALLFMETSAKTSMNVNDIFMAIAKKLPIGPAQGEPTGTVDMNQPQQQQKGSCC 208
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 6/57 (10%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE------CQSSHSISFSM 344
+ CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG C +I F +
Sbjct: 17 RTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEI 73
>gi|399163143|gb|AFP33147.1| rab-5, partial [Caenorhabditis elegans]
Length = 207
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 127/186 (68%), Gaps = 25/186 (13%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD TI+FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 43 FHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 102
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q++F +AK+WVKEL QR A PNIV+ALAGNKAD+ ++R
Sbjct: 103 QESFQKAKNWVKEL---------------------QRQASPNIVMALAGNKADV-ANKRT 140
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
VEY E AYAE+N LLFMETSAKT+MNVN+IF+ IAKKLP G + +
Sbjct: 141 VEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLPIGPAQGEPTGTVDMNQPQQQ 200
Query: 246 KTSNCC 251
+ +CC
Sbjct: 201 QKGSCC 206
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 6/57 (10%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE------CQSSHSISFSM 344
+ CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG C +I F +
Sbjct: 15 RTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEI 71
>gi|148232808|ref|NP_001084521.1| RAB5B, member RAS oncogene family [Xenopus laevis]
gi|46250314|gb|AAH68736.1| MGC81204 protein [Xenopus laevis]
Length = 185
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/159 (62%), Positives = 117/159 (73%), Gaps = 22/159 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITNQ+T
Sbjct: 48 FQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQET 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKELQ R A PNIVIAL+GNKADL TS+R VEY
Sbjct: 108 FARAKTWVKELQ---------------------RQASPNIVIALSGNKADL-TSKRMVEY 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
E +AYA++N LLFMETSAKTAMNVN++F+ I K + K
Sbjct: 146 EEAQAYADDNSLLFMETSAKTAMNVNDLFLAIGKTVWAK 184
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 48/55 (87%), Gaps = 3/55 (5%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRG RPN Q+QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGA--ARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|148234775|ref|NP_001079817.1| muscle RAS oncogene homolog [Xenopus laevis]
gi|32766475|gb|AAH54969.1| MGC64433 protein [Xenopus laevis]
Length = 213
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/163 (60%), Positives = 116/163 (71%), Gaps = 22/163 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+ Q+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+V+DIT +T
Sbjct: 47 FQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPET 106
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNK+DL +R VEY
Sbjct: 107 FDRAKAWVKEL---------------------QRQASPNIVIALAGNKSDL-AEKRMVEY 144
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN 231
E + YAE+ GLLFMETSAKTAMNVNE+F+ IAKK+PK + N
Sbjct: 145 EEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKSDAQN 187
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 45/64 (70%), Gaps = 10/64 (15%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
MAN + +NG G Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+
Sbjct: 1 MANRGSLRANGAG----------QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQET 50
Query: 329 TIGG 332
TIG
Sbjct: 51 TIGA 54
>gi|295789553|pdb|3MJH|A Chain A, Crystal Structure Of Human Rab5a In Complex With The C2h2
Zinc Finger Of Eea1
gi|295789555|pdb|3MJH|C Chain C, Crystal Structure Of Human Rab5a In Complex With The C2h2
Zinc Finger Of Eea1
Length = 168
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/151 (64%), Positives = 117/151 (77%), Gaps = 22/151 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAG ERYH+LAPMYYR AQAAI+VYDITN+++F RAK+W
Sbjct: 40 AAFLTQTVCLDDTTVKFEIWDTAGLERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKELQ R A PNIVIAL+GNKADL ++R V++ E ++YA
Sbjct: 100 VKELQ---------------------RQASPNIVIALSGNKADLA-NKRAVDFQEAQSYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
++N LLFMETSAKT+MNVNEIF+ IAKKLPK
Sbjct: 138 DDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 168
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/39 (89%), Positives = 38/39 (97%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 2 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 40
>gi|226372644|gb|ACO51947.1| Ras-related protein Rab-5B [Rana catesbeiana]
Length = 213
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/182 (56%), Positives = 124/182 (68%), Gaps = 27/182 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+ Q+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+V+DIT +TF RAK+W
Sbjct: 54 AAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAW 113
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL QR A PNIVIALAGNK+DL +R VE+ E +AYA
Sbjct: 114 VKEL---------------------QRQASPNIVIALAGNKSDL-AEKRMVEFEEAQAYA 151
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRR-----LVETAEAPKTSNC 250
E+ LLFMETSAKTAMNVNE+F+ IAKK+PK + N R L + + P++ C
Sbjct: 152 EDTSLLFMETSAKTAMNVNELFLAIAKKMPKSDAQNPTHAARNRGVNLQGSDQQPRSGCC 211
Query: 251 CN 252
N
Sbjct: 212 SN 213
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 10/64 (15%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
MA+ +S +NG G Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF EYQE+
Sbjct: 1 MASRGSSRANGVG----------QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEYQET 50
Query: 329 TIGG 332
TIG
Sbjct: 51 TIGA 54
>gi|410896506|ref|XP_003961740.1| PREDICTED: ras-related protein Rab-5B-like [Takifugu rubripes]
Length = 216
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 123/187 (65%), Gaps = 26/187 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+ Q+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+V+DIT +T
Sbjct: 49 FQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPET 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL RR VE+
Sbjct: 109 FERAKAWVKEL---------------------QRQASPNIVIALAGNKADL-AERRLVEF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRL----VETAEA 244
E + YAE+ GLLFMETSAKTAMNVN++F+ IAKK+PK + N R ++ +
Sbjct: 147 EEAQTYAEDTGLLFMETSAKTAMNVNDLFLAIAKKMPKTDTQNPTHAVRHRGVNLQDPDT 206
Query: 245 PKTSNCC 251
T CC
Sbjct: 207 HSTRACC 213
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 278 NGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
N RG ++ + Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+TIG
Sbjct: 2 NSRGSGVRSNSTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGA 56
>gi|47213194|emb|CAF95985.1| unnamed protein product [Tetraodon nigroviridis]
Length = 213
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 122/187 (65%), Gaps = 26/187 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+ Q+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+V+DIT +T
Sbjct: 49 FQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPET 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
RAK+WVKEL QR A PNIVIALAGNKADL RR VE+
Sbjct: 109 LERAKAWVKEL---------------------QRQASPNIVIALAGNKADL-AERRLVEF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRL----VETAEA 244
E + YAEE GLLFMETSAKTAMNVN++F+ IAKK+PK + N R ++ +
Sbjct: 147 EEAQTYAEETGLLFMETSAKTAMNVNDLFLAIAKKMPKTDTQNPTHAVRHRGVNLQDPDT 206
Query: 245 PKTSNCC 251
T CC
Sbjct: 207 HSTRACC 213
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 292 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+TIG
Sbjct: 16 QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGA 56
>gi|47218775|emb|CAG02761.1| unnamed protein product [Tetraodon nigroviridis]
Length = 228
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/202 (53%), Positives = 134/202 (66%), Gaps = 41/202 (20%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 49 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 108
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL ++R +++
Sbjct: 109 FVRAKNWVKEL---------------------QRQASPNIVIALAGNKADL-ANKRALDF 146
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEI------------AKKLPKKEVN-NGQGG 235
+ ++YA++N LLFMETSAKT+MNVNEIF+ I AKKLPK E +G G
Sbjct: 147 QDAQSYADDNSLLFMETSAKTSMNVNEIFMAIGKIAHCSLMVPPAKKLPKNEPQASGAGS 206
Query: 236 RR-----LVETAEAPKTSNCCN 252
R L ETA+ P + CC+
Sbjct: 207 GRNRGVDLTETAQ-PTSRTCCS 227
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 279 GRGGRIQRPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRGG RPN +KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGGAT-RPNGPNAGSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG 55
>gi|328790844|ref|XP_003251474.1| PREDICTED: ras-related protein Rab-5B-like [Apis mellifera]
Length = 221
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 117/157 (74%), Gaps = 25/157 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTF RA++WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QDTFVRAQTWVKE---------------------LQRQASPSIVIALAGNKADLA-NKRI 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAK 222
VE+ E + YA+ENGLLFMETSAKTAMNVN+IF+ I K
Sbjct: 143 VEFDEAQTYADENGLLFMETSAKTAMNVNDIFLAIGK 179
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 45/51 (88%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|297262644|ref|XP_001096821.2| PREDICTED: ras-related protein Rab-5B-like [Macaca mulatta]
Length = 207
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 128/187 (68%), Gaps = 27/187 (14%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 45 FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 104
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
Q+TF RAK+WVKE LQR A P+IVIALAGNKADL ++R
Sbjct: 105 QETFARAKTWVKE---------------------LQRQASPSIVIALAGNKADLA-NKRM 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
VEY E +AYA++N LLFMETSAKTAMNVN++F+ I K L + G L E ++
Sbjct: 143 VEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIGKNLGGTACRS--RGVDLHEQSQQN 200
Query: 246 KTSNCCN 252
K+ C N
Sbjct: 201 KSQCCSN 207
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|66824005|ref|XP_645357.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|75014117|sp|Q86JP3.1|RAB5A_DICDI RecName: Full=Ras-related protein Rab-5A
gi|60473482|gb|EAL71426.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 120/180 (66%), Gaps = 25/180 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+ QTVCL+D T++FEIWDTAGQERYHTLAPMYYR AQAAI+VYDI ++D+F RA W
Sbjct: 44 AAFLAQTVCLNDTTVKFEIWDTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE LQR PNIVIALAGNK DL R+ VE +E + YA
Sbjct: 104 VKE---------------------LQRQGSPNIVIALAGNKLDLAAKRK-VETAEAQQYA 141
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRL---VETAEAPKTSNCCN 252
EENGLLFMETSAKT+ NVNE+FVEIAKKLPK GR ++ K + CCN
Sbjct: 142 EENGLLFMETSAKTSQNVNELFVEIAKKLPKTPTTRPGSGRVAIAPIDNGNTGKKNKCCN 201
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/39 (82%), Positives = 35/39 (89%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI Q+KLVLLGE+AVGKSSLVLRFVRG F +YQESTIG
Sbjct: 6 KIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGA 44
>gi|403297081|ref|XP_003945248.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5B [Saimiri
boliviensis boliviensis]
Length = 342
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 115/150 (76%), Gaps = 22/150 (14%)
Query: 73 LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRA 132
LF AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITNQ+TF RA
Sbjct: 174 LFIAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARA 233
Query: 133 KSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGE 192
K+WVKE LQR A P+IVIALAGNKADL ++R VEY E +
Sbjct: 234 KTWVKE---------------------LQRQASPSIVIALAGNKADL-ANKRMVEYEEAQ 271
Query: 193 AYAEENGLLFMETSAKTAMNVNEIFVEIAK 222
AYA++N LLFMETSAKTAMNVN++F+ I K
Sbjct: 272 AYADDNSLLFMETSAKTAMNVNDLFLAIGK 301
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 325
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+G F +
Sbjct: 132 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGIFPSF 172
>gi|281206811|gb|EFA80995.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 219
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 121/180 (67%), Gaps = 24/180 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+ QTVCL+D T++FEIWDTAGQERYHTLAPMYYR AQAAI+VYDI +QD+F RA W
Sbjct: 62 AAFLAQTVCLNDTTVKFEIWDTAGQERYHTLAPMYYRGAQAAIVVYDIRSQDSFERAIKW 121
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE LQR PNIVIALAGNK DL ++R VE SE + YA
Sbjct: 122 VKE---------------------LQRQGSPNIVIALAGNKLDL-AAKRKVETSEAQTYA 159
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAE--APKTSNCCNT 253
EENGLLFMETSAKTA NVNE+FVEIAKKLPK GR + + K CC++
Sbjct: 160 EENGLLFMETSAKTAQNVNELFVEIAKKLPKTPNPRPGSGRLPISPIDNNPQKKKPCCSS 219
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 30/33 (90%)
Query: 300 LVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
LVLLGE+AVGKSSLVLRFVRG F +YQESTIG
Sbjct: 30 LVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGA 62
>gi|168054193|ref|XP_001779517.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162669099|gb|EDQ55693.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 128/189 (67%), Gaps = 29/189 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+ +++ T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDITN
Sbjct: 35 FFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITN 94
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
D+FGRAK WV+E LQR PN+V+ALAGNKADL +S+R
Sbjct: 95 SDSFGRAKKWVQE---------------------LQRQGNPNLVMALAGNKADL-SSKRK 132
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEA- 244
+E EG++YAEENGL FMETSAKT+ NVNE+F EIA+KLPK + G L + + +
Sbjct: 133 IEAEEGQSYAEENGLFFMETSAKTSQNVNELFYEIARKLPKAQPAQAS-GMSLTDGSTSR 191
Query: 245 --PKTSNCC 251
P S CC
Sbjct: 192 LGPAKSTCC 200
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 31/41 (75%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
T A Q KLVLLG+ GKSSL LRFV+GQF +YQESTIG
Sbjct: 4 TGANHMQAKLVLLGDMGAGKSSLALRFVKGQFFDYQESTIG 44
>gi|168034319|ref|XP_001769660.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679009|gb|EDQ65461.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 127/188 (67%), Gaps = 27/188 (14%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+ +++ T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDITN
Sbjct: 35 FFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITN 94
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
D+FGRAK WV+E LQR PN+V+ALAGNKADL +++R
Sbjct: 95 SDSFGRAKKWVQE---------------------LQRQGNPNLVMALAGNKADL-SAKRK 132
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAE-- 243
VE EG++YAEENGL FMETSAKTA NVNE+F EIA+KLPK + G +++
Sbjct: 133 VEAEEGQSYAEENGLFFMETSAKTAQNVNELFYEIARKLPKAQPAQATGVSLTDKSSSRL 192
Query: 244 APKTSNCC 251
P + CC
Sbjct: 193 TPAKTTCC 200
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 31/42 (73%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
T A Q KLVLLG+ GKSSL LRFVRGQF +YQESTIG
Sbjct: 4 TGANHTQAKLVLLGDMGAGKSSLSLRFVRGQFFDYQESTIGA 45
>gi|325303414|tpg|DAA34126.1| TPA_exp: Rab5-related subfamily protein 481 [Amblyomma variegatum]
Length = 179
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/146 (67%), Positives = 111/146 (76%), Gaps = 22/146 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITNQDTFGRAK+W
Sbjct: 56 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTW 115
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE LQR A P+IVIALAGNKADL S+R VE E +AY+
Sbjct: 116 VKE---------------------LQRQASPSIVIALAGNKADL-ASQRAVELEEAQAYS 153
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIA 221
EE GLLFMETSAKTAM ++IF+ IA
Sbjct: 154 EEXGLLFMETSAKTAMKRHDIFLAIA 179
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 46/54 (85%)
Query: 279 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRG QRPN Q KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGAAAQRPNGAPQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|196000895|ref|XP_002110315.1| hypothetical protein TRIADDRAFT_22550 [Trichoplax adhaerens]
gi|190586266|gb|EDV26319.1| hypothetical protein TRIADDRAFT_22550 [Trichoplax adhaerens]
Length = 229
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/166 (62%), Positives = 117/166 (70%), Gaps = 35/166 (21%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQE-------------RYHTLAPMYYRNAQAAIIVYD 122
AAF+TQTVCLDDVT++FEIWDTAGQE RYH+LAPMYYR AQ AI+VYD
Sbjct: 55 AAFLTQTVCLDDVTVKFEIWDTAGQENIFLILPSFCRYLRYHSLAPMYYRGAQTAIVVYD 114
Query: 123 ITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS 182
I+N ++F RAK+WVKEL QR A PNIVIALAGNKADL +
Sbjct: 115 ISNAESFQRAKAWVKEL---------------------QRQASPNIVIALAGNKADL-AN 152
Query: 183 RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
+R V+ E + YAEENGLLFMETSAKTAMNVNEIF+ IAKKLPK E
Sbjct: 153 KRMVDADEAQVYAEENGLLFMETSAKTAMNVNEIFLAIAKKLPKSE 198
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 45/51 (88%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
G+ QRPN Q+KICQ+KLVLLGESAVGKSSLVLRFV+GQF EYQESTIG
Sbjct: 5 GQPQRPNGSGQSKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGA 55
>gi|89258417|gb|ABD65432.1| Rab5 [Suberites domuncula]
Length = 207
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/147 (68%), Positives = 110/147 (74%), Gaps = 22/147 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTV LDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DTF RAKSW
Sbjct: 56 AAFLTQTVNLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNNDTFVRAKSW 115
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL QR A PNIVIALAGNKADL S+R V++ E YA
Sbjct: 116 VKEL---------------------QRQASPNIVIALAGNKADL-ASKRMVDFEEAHVYA 153
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAK 222
EEN LLFMETSAKTAMNVN+IF+ IAK
Sbjct: 154 EENSLLFMETSAKTAMNVNDIFLAIAK 180
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 47/55 (85%)
Query: 278 NGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+GR G +QR N + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 2 SGRPGTVQRANGIPREKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|330846456|ref|XP_003295044.1| Rab GTPase [Dictyostelium purpureum]
gi|325074347|gb|EGC28427.1| Rab GTPase [Dictyostelium purpureum]
Length = 199
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/161 (62%), Positives = 114/161 (70%), Gaps = 22/161 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+ QTVCL+D T++FEIWDTAGQERYHTLAPMYYR AQAAI+VYDI ++D+F RA W
Sbjct: 44 AAFLAQTVCLNDTTVKFEIWDTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE LQR PNIVIALAGNK DL ++R VE +E + YA
Sbjct: 104 VKE---------------------LQRQGSPNIVIALAGNKLDL-AAKRKVETAEAQQYA 141
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR 236
EENGLLFMETSAKT+ NVNE+FVEIAKKLPK GR
Sbjct: 142 EENGLLFMETSAKTSQNVNELFVEIAKKLPKTPTTRPGSGR 182
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/39 (82%), Positives = 35/39 (89%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI Q+KLVLLGE+AVGKSSLVLRFVRG F +YQESTIG
Sbjct: 6 KIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGA 44
>gi|328874189|gb|EGG22555.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 201
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/151 (66%), Positives = 112/151 (74%), Gaps = 22/151 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+ QTVCL+D T++FEIWDTAGQERYHTLAPMYYR AQAAI+VYDI +QD+F RA W
Sbjct: 44 AAFLAQTVCLNDTTVKFEIWDTAGQERYHTLAPMYYRGAQAAIVVYDIRSQDSFERAIKW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE LQR PNIVIALAGNK DL ++R VE +E + YA
Sbjct: 104 VKE---------------------LQRQGSPNIVIALAGNKLDL-AAKRKVETAEAQQYA 141
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
EENGLLFMETSAKTA NVNE+FVEIAKKLPK
Sbjct: 142 EENGLLFMETSAKTAQNVNELFVEIAKKLPK 172
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/39 (82%), Positives = 35/39 (89%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI Q+KLVLLGE+AVGKSSLVLRFVRG F +YQESTIG
Sbjct: 6 KIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGA 44
>gi|109131470|ref|XP_001086669.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Macaca mulatta]
gi|355704975|gb|EHH30900.1| hypothetical protein EGK_20720 [Macaca mulatta]
gi|355757526|gb|EHH61051.1| hypothetical protein EGM_18978 [Macaca fascicularis]
Length = 215
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 128/190 (67%), Gaps = 29/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEI DTAGQERYH+LAPMYYR AQA I+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIRDTAGQERYHSLAPMYYRGAQAVIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKE LQR A PN VIALAGNKA+L ++R V +
Sbjct: 108 FARAKNWVKE---------------------LQRQASPNTVIALAGNKANL-ANKRAVNF 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETA 242
E +++A++N LLFMETSAKT+M+VNEIF+ IAKKLPK E N+ +G G L E
Sbjct: 146 QEAQSFADDNSLLFMETSAKTSMDVNEIFMAIAKKLPKDEPQNPGANSARGRGVDLTEPT 205
Query: 243 EAPKTSNCCN 252
P S CC+
Sbjct: 206 R-PTRSQCCS 214
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|55670041|pdb|1TU4|A Chain A, Crystal Structure Of Rab5-Gdp Complex
gi|55670042|pdb|1TU4|B Chain B, Crystal Structure Of Rab5-Gdp Complex
gi|55670043|pdb|1TU4|C Chain C, Crystal Structure Of Rab5-Gdp Complex
gi|55670044|pdb|1TU4|D Chain D, Crystal Structure Of Rab5-Gdp Complex
Length = 171
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 115/158 (72%), Gaps = 22/158 (13%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAP YYR AQAAI+VYDITN+++
Sbjct: 35 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPXYYRGAQAAIVVYDITNEES 94
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKELQ R A PNIVIAL+GNKADL ++R V++
Sbjct: 95 FARAKNWVKELQ---------------------RQASPNIVIALSGNKADLA-NKRAVDF 132
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
E ++YA++N LLF ETSAKT+ NVNEIF IAKKLPK
Sbjct: 133 QEAQSYADDNSLLFXETSAKTSXNVNEIFXAIAKKLPK 170
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/39 (89%), Positives = 38/39 (97%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 42
>gi|428174756|gb|EKX43650.1| hypothetical protein GUITHDRAFT_159784 [Guillardia theta CCMP2712]
Length = 204
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 128/191 (67%), Gaps = 28/191 (14%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTV L+D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDIT+
Sbjct: 35 FFDYQESTIGAAFLTQTVALNDTTVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITS 94
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
D+F RAKSWV+ELQR PNIVIALAGNK+DL S+R
Sbjct: 95 ---------------------TDSFARAKSWVRELQRQGNPNIVIALAGNKSDL-ASKRK 132
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN---GQGGRRLVETA 242
VE E YAEEN ++FMETSAKTA NVNE+FV+IA+KLPK++ + G ++ E
Sbjct: 133 VEPDEARQYAEENNIMFMETSAKTASNVNELFVQIARKLPKQQQQDKPSGSANIKVNEPK 192
Query: 243 EAPKTSNCCNT 253
+ K +NC +
Sbjct: 193 QDAKANNCSGS 203
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 32/35 (91%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+KLVLLGE AVGKSSLVLRFVRGQF +YQESTIG
Sbjct: 11 FKLVLLGEGAVGKSSLVLRFVRGQFFDYQESTIGA 45
>gi|313213264|emb|CBY37104.1| unnamed protein product [Oikopleura dioica]
gi|313226486|emb|CBY21631.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 127/179 (70%), Gaps = 25/179 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDDVT++FEIWDTAGQERYH+LAPMYYR AQAA++VYDI DTF RA++W
Sbjct: 48 AAFLTQTVCLDDVTVKFEIWDTAGQERYHSLAPMYYRGAQAAVVVYDIQCPDTFSRAQAW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL++ A N D IVIALAGNKADL ++R +E E E YA
Sbjct: 108 VKELRQQA--NQD-------------------IVIALAGNKADL-AAKREIETEEAEVYA 145
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR-RLVETAEAPKTSNCCNT 253
+EN LLFMETSAKTA+NVN++F++IAKKLPKK+ +G L E++ K CC +
Sbjct: 146 KENNLLFMETSAKTALNVNDLFLQIAKKLPKKDSQSGAASNVNLGESSNQKKP--CCGS 202
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI Q+KLVLLGE+AVGKSSLVLRFV+G+F ++QESTIG
Sbjct: 10 KIIQFKLVLLGEAAVGKSSLVLRFVKGEFKDHQESTIGA 48
>gi|302812155|ref|XP_002987765.1| rab family GTPase [Selaginella moellendorffii]
gi|302821214|ref|XP_002992271.1| rab family GTPase [Selaginella moellendorffii]
gi|300139921|gb|EFJ06652.1| rab family GTPase [Selaginella moellendorffii]
gi|300144384|gb|EFJ11068.1| rab family GTPase [Selaginella moellendorffii]
Length = 199
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 106/208 (50%), Positives = 133/208 (63%), Gaps = 28/208 (13%)
Query: 51 IWLKDRVDCMTQIVINVV---FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D + +V+ V F+ Y S AAF+TQT+ +++ T++FEIWDTAGQERYH
Sbjct: 14 VLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQERYH 73
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AAIIVYDITN ++F RAK WV+ELQR G A
Sbjct: 74 SLAPMYYRGAAAAIIVYDITNAESFARAKKWVQELQRQ--------GNA----------- 114
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
N+V+ALAGNKADL R+ +E EG++YA+ENGL FMETSAKTA NVNE+F EIA+KL
Sbjct: 115 --NLVMALAGNKADLAAKRK-IETQEGQSYADENGLFFMETSAKTAENVNELFYEIARKL 171
Query: 225 PKKEVNNGQGGRRLVETAEAPKTSNCCN 252
PK + G L + K S CCN
Sbjct: 172 PKAQPAQQNTGMVLTDRPIETKKSACCN 199
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 30/36 (83%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q KLVLLG+ GKSSLVLRFV+GQF +YQESTIG
Sbjct: 10 QAKLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGA 45
>gi|312376181|gb|EFR23347.1| hypothetical protein AND_13023 [Anopheles darlingi]
Length = 183
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 114/157 (72%), Gaps = 25/157 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+C+DD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 49 FHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQN 108
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
D++ RAK+WVKELQ R A PNIVIALAGNKADL S R
Sbjct: 109 SDSYARAKTWVKELQ---------------------RQASPNIVIALAGNKADLANS-RV 146
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAK 222
V+Y E + YA++NGLLFMETSAKTA+NVN+IF+ I +
Sbjct: 147 VDYEEAKQYADDNGLLFMETSAKTAVNVNDIFLAIGE 183
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 45/52 (86%)
Query: 281 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GG QR N TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 GGAAQRTNGATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 59
>gi|158297331|ref|XP_317585.4| AGAP007901-PA [Anopheles gambiae str. PEST]
gi|157015144|gb|EAA43939.4| AGAP007901-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 114/157 (72%), Gaps = 25/157 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQT+C+DD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 54 FHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQN 113
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
D+F RAK+WVKEL QR A PNIVIALAGNKADL S R
Sbjct: 114 SDSFARAKTWVKEL---------------------QRQASPNIVIALAGNKADLANS-RV 151
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAK 222
V+Y E + YA++NGLLFMETSAKTA+NVN+IF+ I +
Sbjct: 152 VDYEEAKQYADDNGLLFMETSAKTAVNVNDIFLAIGE 188
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 5/67 (7%)
Query: 266 ILTMANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 325
I++MA+S + GG QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEY
Sbjct: 3 IVSMASSPRA-----GGAAQRPNGATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEY 57
Query: 326 QESTIGG 332
QESTIG
Sbjct: 58 QESTIGA 64
>gi|55962807|emb|CAI11701.1| RAB5A member RAS oncogene family [Danio rerio]
Length = 180
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 109/154 (70%), Gaps = 22/154 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+ Q+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+V+DIT +T
Sbjct: 48 FQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPET 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL +R VEY
Sbjct: 108 FERAKAWVKEL---------------------QRQASPNIVIALAGNKADLA-DKRLVEY 145
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAK 222
E + YAE+ GLLFMETSAKTAMNVNE+F+ I K
Sbjct: 146 EEAQTYAEDTGLLFMETSAKTAMNVNELFLAIGK 179
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 292 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+TIG
Sbjct: 15 QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGA 55
>gi|351713433|gb|EHB16352.1| Ras-related protein Rab-5A [Heterocephalus glaber]
Length = 221
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 138/214 (64%), Gaps = 35/214 (16%)
Query: 51 IWLKDRVDCMTQIVINVV---FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L + V + +V++ V F+ + S AAF+TQT+CLDD T++FEIWD AGQERYH
Sbjct: 24 VLLGESVVGKSSLVLHFVKGQFHEFQESTTGAAFLTQTMCLDDTTVKFEIWDIAGQERYH 83
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPM+YR AQA+I+VYDITN+++F RAK+WVKEL QR A
Sbjct: 84 SLAPMHYRGAQASIVVYDITNEESFARAKNWVKEL---------------------QRQA 122
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
PNI IAL GN ADL +RR V++ E ++ A++N LF+ETSAKT+MNVNEIF+ IAKKL
Sbjct: 123 SPNIAIALLGNTADL-ANRRAVDFQEAQSCADDNSFLFLETSAKTSMNVNEIFMAIAKKL 181
Query: 225 PKKEVNN-GQGGRR-----LVETAEAPKTSNCCN 252
K E N G+ R L E + P S CC+
Sbjct: 182 SKNEPQNPGENSARGRGVDLTEPTQ-PTRSQCCS 214
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN T KICQ+KLVLLGES VGKSSLVL FV+GQFHE+QEST G
Sbjct: 8 RPNGANTGNKICQFKLVLLGESVVGKSSLVLHFVKGQFHEFQESTTGA 55
>gi|356569718|ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 200
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 120/185 (64%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+
Sbjct: 38 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDS 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+ALAGNKADL R+ V
Sbjct: 98 FTRAKKWV---------------------QELQKQGNPNMVMALAGNKADLEDKRK-VTA 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAEENGL FMETSAKTA NVN+IF EIAK+LP+ + G LV+ AE +
Sbjct: 136 EEARVYAEENGLFFMETSAKTASNVNDIFYEIAKRLPRAQPAQNPAGMVLVDRPAEGTRA 195
Query: 248 SNCCN 252
++CC+
Sbjct: 196 ASCCS 200
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|397511745|ref|XP_003826227.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Pan paniscus]
Length = 202
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 119/171 (69%), Gaps = 30/171 (17%)
Query: 88 VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNI 147
+ ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++F RAK+WVKEL
Sbjct: 53 IGVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKEL-------- 104
Query: 148 DTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSA 207
QR A PNIVIAL+GNKADL ++R V++ E ++YA++N LLFMETSA
Sbjct: 105 -------------QRQASPNIVIALSGNKADL-ANKRAVDFQEAQSYADDNSLLFMETSA 150
Query: 208 KTAMNVNEIFVEIAKKLPKKEVNN-------GQGGRRLVETAEAPKTSNCC 251
KT+MNVNEIF+ IAKKLPK E N G+GG L E + P + CC
Sbjct: 151 KTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGGVDLTEPTQ-PTRNQCC 200
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG 54
>gi|6010033|emb|CAB57220.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 120/185 (64%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+
Sbjct: 38 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADS 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+ALAGNKADL R+ V
Sbjct: 98 FTRAKKWV---------------------QELQKQGNPNMVMALAGNKADLEDKRK-VTA 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAEENGL FMETSAKTA NVN++F EIAK+LP+ + G LV+ AE +
Sbjct: 136 EEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNPAGMVLVDRPAEGARA 195
Query: 248 SNCCN 252
++CC+
Sbjct: 196 ASCCS 200
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVL FV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLLFVKGQFLEFQESTIGA 45
>gi|12311684|emb|CAC24477.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 120/185 (64%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+
Sbjct: 38 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADS 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+ALAGNKADL R+ V
Sbjct: 98 FTRAKKWV---------------------QELQKQGNPNMVMALAGNKADLEDKRK-VTA 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAEENGL FMETSAKTA NVN++F EIAK+LP+ + G LV+ AE +
Sbjct: 136 EEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNPAGMVLVDRPAEGARA 195
Query: 248 SNCCN 252
++CC+
Sbjct: 196 ASCCS 200
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|6010031|emb|CAB57219.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 120/185 (64%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+
Sbjct: 38 FQESTIGAAFFSQTLVVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADS 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+ALAGNKADL R+ V
Sbjct: 98 FTRAKKWV---------------------QELQKQGNPNMVMALAGNKADLEDKRK-VTV 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAEENGL FMETSAKTA NVN++F EIAK+LP+ + G LV+ AE +
Sbjct: 136 EEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNPAGMVLVDRPAEGARA 195
Query: 248 SNCCN 252
++CC+
Sbjct: 196 ASCCS 200
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|12311682|emb|CAC24476.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 120/185 (64%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+
Sbjct: 38 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADS 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+ALAGNKADL R+ V
Sbjct: 98 FTRAKKWV---------------------QELQKQGNPNMVMALAGNKADLEDKRK-VTA 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAEENGL FMETSAKTA NVN++F EIAK+LP+ + G LV+ AE +
Sbjct: 136 EEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNPAGMVLVDRPAEGARA 195
Query: 248 SNCCN 252
++CC+
Sbjct: 196 ASCCS 200
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K VLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KFVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|12311678|emb|CAC24474.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 119/178 (66%), Gaps = 23/178 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+F RAK W
Sbjct: 41 AAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKW 100
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V +ELQ+ PN+V+ALAGNKADL R+ V E YA
Sbjct: 101 V---------------------QELQKQGNPNMVMALAGNKADLEDKRK-VTAEEARVYA 138
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKTSNCCN 252
EENGL FMETSAKTA NVN++F EIAK+LP+ + G LV+ AE + ++CC+
Sbjct: 139 EENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNPAGMVLVDRPAEGARAASCCS 196
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K VLLG+ GKSSLVLRFV+GQF E+Q STIG
Sbjct: 8 KFVLLGDMGAGKSSLVLRFVKGQFLEFQVSTIGA 41
>gi|240976227|ref|XP_002402331.1| RAS-related protein, putative [Ixodes scapularis]
gi|215491138|gb|EEC00779.1| RAS-related protein, putative [Ixodes scapularis]
Length = 175
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/157 (62%), Positives = 111/157 (70%), Gaps = 31/157 (19%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y AAF+TQTVCLD+ T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN
Sbjct: 47 FHEYQESTIGAAFLTQTVCLDETTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 106
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTFGRAK+WVKE LQR A P+IVIALAGNKADL S+R
Sbjct: 107 QDTFGRAKTWVKE---------------------LQRQASPSIVIALAGNKADL-ASKRA 144
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAK 222
VE ENGLLFMETSAKTAMNVN+IF+ I +
Sbjct: 145 VELE------VENGLLFMETSAKTAMNVNDIFLAIGE 175
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 47/54 (87%), Gaps = 1/54 (1%)
Query: 279 GRGGRI-QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRG + QRPN Q KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGAAVAQRPNGAPQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 56
>gi|116779293|gb|ABK21222.1| unknown [Picea sitchensis]
gi|116790907|gb|ABK25786.1| unknown [Picea sitchensis]
Length = 200
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 120/178 (67%), Gaps = 23/178 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF +QT+ +++VT++FEIWDTAGQERYH+LAPMYYR A AAIIVYDITN D+F RAK+W
Sbjct: 45 AAFFSQTLAVNEVTVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNSDSFVRAKNW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V ELQ+ PN+V+ALAGNKAD+ R+ VE E E YA
Sbjct: 105 ---------------------VLELQKQGNPNLVMALAGNKADVAAKRK-VEAEEAETYA 142
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVET-AEAPKTSNCCN 252
+ENGL FMETSAKTA NVNE+F EIA++LPK G L + AE +T +CC+
Sbjct: 143 KENGLFFMETSAKTAQNVNELFYEIARRLPKARPVQQPAGMVLTDRPAERARTYSCCS 200
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 30/36 (83%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q KLVLLG+ GKSSLVLRFV+GQF +YQESTIG
Sbjct: 10 QAKLVLLGDMGTGKSSLVLRFVKGQFLDYQESTIGA 45
>gi|12311680|emb|CAC24475.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 120/185 (64%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+
Sbjct: 34 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADS 93
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+ALAGNKADL +R V
Sbjct: 94 FTRAKKWV---------------------QELQKQGNPNMVMALAGNKADL-EDKREVTA 131
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAEENGL FMETSAKTA NVN++F EIAK+LP+ + G LV+ AE +
Sbjct: 132 EEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNPAGMVLVDRPAEGARA 191
Query: 248 SNCCN 252
++CC+
Sbjct: 192 ASCCS 196
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K VLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KFVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 41
>gi|1370178|emb|CAA98166.1| RAB5A [Lotus japonicus]
gi|388504250|gb|AFK40191.1| unknown [Lotus japonicus]
Length = 200
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 119/185 (64%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+
Sbjct: 38 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDS 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+A AGNK+DL R+ V
Sbjct: 98 FTRAKKWV---------------------QELQKQGNPNMVMAFAGNKSDLEDKRK-VTA 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAEENGL FMETSAKTA NVN++F EIAK+LP+ + G LV+ AE +
Sbjct: 136 DEARVYAEENGLFFMETSAKTAANVNDVFYEIAKRLPRAQPAQNPAGMVLVDRPAEGARA 195
Query: 248 SNCCN 252
S+CC+
Sbjct: 196 SSCCS 200
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|357460687|ref|XP_003600625.1| GTP binding protein [Medicago truncatula]
gi|355489673|gb|AES70876.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 120/185 (64%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+
Sbjct: 38 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDS 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+ALAGNK+DL R+ V
Sbjct: 98 FSRAKKWV---------------------QELQKQGNPNMVMALAGNKSDLEDKRK-VTA 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAEENGL FMETSAK+A NVN++F EIAK+LP+ + G LV+ AE +
Sbjct: 136 EEARVYAEENGLFFMETSAKSAANVNDVFYEIAKRLPRAQPAQNPAGMVLVDRPAEGSRA 195
Query: 248 SNCCN 252
++CC+
Sbjct: 196 ASCCS 200
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|255639786|gb|ACU20186.1| unknown [Glycine max]
Length = 233
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 128/210 (60%), Gaps = 29/210 (13%)
Query: 50 QIWLKDRVDCMTQIVINVV------FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERY 103
Q+ L D + +V+ V F AAF +QT+ ++D T++FEIWDTAGQERY
Sbjct: 46 QVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 105
Query: 104 HTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRM 163
H+LAPMYYR A AAIIVY IT+ D+F RAK WV +ELQ+
Sbjct: 106 HSLAPMYYRGAAAAIIVYGITSSDSFTRAKKWV---------------------QELQKQ 144
Query: 164 APPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKK 223
PN+V+ALAGNKADL R+ V E YAEENGL FMETSAKTA NVN+IF EIAK+
Sbjct: 145 GNPNMVMALAGNKADLEDKRK-VTAEEARVYAEENGLFFMETSAKTASNVNDIFYEIAKR 203
Query: 224 LPKKEVNNGQGGRRLVE-TAEAPKTSNCCN 252
LP+ + G LV+ AE + ++CC+
Sbjct: 204 LPRAQPAQNPAGMVLVDRPAEGTRAASCCS 233
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 29/37 (78%)
Query: 296 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
C + VLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 42 CSFHQVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 78
>gi|326436303|gb|EGD81873.1| RAB5C protein [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 122/179 (68%), Gaps = 26/179 (14%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTVCLDD T ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDIT+ +F RAKS
Sbjct: 46 AAFLTQTVCLDDGTKVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITSHASFLRAKS 105
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVKELQ+ A N+ VIALAGNKADL +RR V+ E EAY
Sbjct: 106 WVKELQKQA-ENV--------------------AVIALAGNKADLA-ARREVQTEEVEAY 143
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQG-GRRLVETAEAPKTSNCC 251
A+E LLFMETSAKTA NV EIF IAK LPK ++ G G R E AEA K+ CC
Sbjct: 144 AQEEKLLFMETSAKTAFNVVEIFAAIAKHLPKNQDTRRGDGVNLRRAEAAEA-KSGGCC 201
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 10/53 (18%)
Query: 279 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GRGG+ ++ Q+KLVLLGE+AVGKSSLVLRFV+GQF EYQESTIG
Sbjct: 3 GRGGQ----------QMNQFKLVLLGETAVGKSSLVLRFVKGQFQEYQESTIG 45
>gi|449664040|ref|XP_002167518.2| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5C-like
[Hydra magnipapillata]
Length = 225
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 129/214 (60%), Gaps = 32/214 (14%)
Query: 48 MAQIWLKDRVDCMTQIVINVV---FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQE 101
M I+L + + +V+ V F+ Y AAF+TQTVC DD T++FEIWDTAGQE
Sbjct: 33 MQVIFLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCFDDTTVKFEIWDTAGQE 92
Query: 102 RYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQ 161
RYH+LAPMYYR +QAAI+VYDIT N D F + L
Sbjct: 93 RYHSLAPMYYRGSQAAIVVYDIT---------------------NTDLFAQVLHXAGCLA 131
Query: 162 RMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIA 221
NIVI+LAGNKADL ++R V+Y E AYAEENGLLFMETSAKTA NVNE+F+ IA
Sbjct: 132 XXXXCNIVISLAGNKADL-GNKRMVDYEEAHAYAEENGLLFMETSAKTASNVNELFLAIA 190
Query: 222 KKLPKKEVNNGQGG--RRLVETAEAPKT--SNCC 251
KKLPK G GG RR +E E P+ S CC
Sbjct: 191 KKLPKNTDQPGPGGPSRRGIELTENPEPPKSGCC 224
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 43/64 (67%), Gaps = 12/64 (18%)
Query: 280 RGGRIQRPNDQTQAKICQYKLVLL------------GESAVGKSSLVLRFVRGQFHEYQE 327
R G QRPN Q KI +KLVLL GESAVGKSSLVLRFV+GQFHEYQE
Sbjct: 3 RSGTPQRPNGAPQGKIQPFKLVLLELINLIMQVIFLGESAVGKSSLVLRFVKGQFHEYQE 62
Query: 328 STIG 331
STIG
Sbjct: 63 STIG 66
>gi|400977|sp|P31583.1|RHN1_NICPL RecName: Full=Ras-related protein RHN1
gi|19691|emb|CAA46112.1| small GTP binding protein [Nicotiana plumbaginifolia]
Length = 200
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 126/208 (60%), Gaps = 29/208 (13%)
Query: 51 IWLKDRVDCMTQIVINVV------FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D + +VI V F AAF + T+ +++ T++FEIWDTAGQERYH
Sbjct: 14 VLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVKFEIWDTAGQERYH 73
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AAIIVYDIT+ D+F RAK WV+ELQ+
Sbjct: 74 SLAPMYYRGAAAAIIVYDITSSDSFARAKK---------------------WVQELQKQG 112
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
PN+V+ALAGNKADL RR V E YAEENGL FMETSAKTA+NVN IF EIAK+L
Sbjct: 113 NPNMVMALAGNKADLE-DRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRL 171
Query: 225 PKKEVNNGQGGRRLVE-TAEAPKTSNCC 251
P+ + G LV+ AE + ++CC
Sbjct: 172 PRAQPAQNPAGMVLVDRAAEGTRATSCC 199
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 31/39 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSS 337
KLVLLG+ GKSSLV+RFV+GQF E+QESTIG SS
Sbjct: 12 KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSS 50
>gi|357491715|ref|XP_003616145.1| GTP binding protein [Medicago truncatula]
gi|355517480|gb|AES99103.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 119/185 (64%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDITN ++
Sbjct: 38 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNLES 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+A AGNKADL R+ V
Sbjct: 98 FTRAKKWV---------------------QELQKQGNPNMVVAFAGNKADLEDKRK-VTA 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAEENGL F+ETSAKTA NVN+IF EIAKKLP+ + G LV+ AE +
Sbjct: 136 EEARVYAEENGLFFIETSAKTAANVNDIFYEIAKKLPRAQPAQNPAGMVLVDRPAEGTRA 195
Query: 248 SNCCN 252
++CC+
Sbjct: 196 ASCCS 200
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|219111761|ref|XP_002177632.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410517|gb|EEC50446.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 201
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 117/176 (66%), Gaps = 24/176 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTV LDD T++FEIWDTAGQERY +LAPMYYR A AAI+VYDITN D+F AKSW
Sbjct: 50 AAFLTQTVQLDDATVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNPDSFTGAKSW 109
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE LQR PN+VIALAGNKADL T RR VE+ E AYA
Sbjct: 110 VKE---------------------LQRRGDPNVVIALAGNKADLET-RRAVEFEEANAYA 147
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
+ENG+L +ETSAK A NV +F+EIAK LPK + +++ + +T NCC
Sbjct: 148 QENGILHLETSAKNANNVKSLFIEIAKTLPKNAPQPEKEAFPILQQQQ--ETRNCC 201
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 286 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
P A++ +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 4 HPGSAANARVHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 50
>gi|363807594|ref|NP_001242153.1| uncharacterized protein LOC100791620 [Glycine max]
gi|255642884|gb|ACU22609.1| unknown [Glycine max]
Length = 200
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 119/185 (64%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+
Sbjct: 38 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDS 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+ALAGNKADL R+ V
Sbjct: 98 FTRAKKWV---------------------QELQKQGNPNMVMALAGNKADLEDKRK-VTA 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAEENGL FMETSAKTA NVN+IF EIAK+LP+ + G LV+ A +
Sbjct: 136 EEARVYAEENGLFFMETSAKTASNVNDIFYEIAKRLPRAQPAQNPAGMVLVDRPAGGTRA 195
Query: 248 SNCCN 252
++CC+
Sbjct: 196 ASCCS 200
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 28/33 (84%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLG+ GKS LVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSGLVLRFVKGQFLEFQESTIG 44
>gi|291001341|ref|XP_002683237.1| rab family small GTPase [Naegleria gruberi]
gi|284096866|gb|EFC50493.1| rab family small GTPase [Naegleria gruberi]
Length = 213
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 122/197 (61%), Gaps = 35/197 (17%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQTV L D ++FEIWDTAGQERY +LAPMYYR A AAI+VYDIT+
Sbjct: 39 FFEYQESTIGAAFLTQTVPLGDTIVKFEIWDTAGQERYKSLAPMYYRGAAAAIVVYDITS 98
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
D+F RAK+WV KELQR NIVIALAGNK DL +R
Sbjct: 99 ADSFQRAKNWV---------------------KELQRQGTTNIVIALAGNKVDL-EDKRQ 136
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
VE +E ++YAE+NGLLFMETSAK A NVNE+FV IA+KLP KE +N + A P
Sbjct: 137 VESAEAKSYAEDNGLLFMETSAKAATNVNELFVAIARKLPSKETDNNNNVNSDLTPAIIP 196
Query: 246 KTSN----------CCN 252
K + CCN
Sbjct: 197 KPGDQPPERKQKGGCCN 213
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
AK +KLVLLGES+VGKSSLVLRFVRGQF EYQESTIG
Sbjct: 10 AKSVPFKLVLLGESSVGKSSLVLRFVRGQFFEYQESTIGA 49
>gi|332215306|ref|XP_003256782.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Nomascus
leucogenys]
gi|395734106|ref|XP_003776358.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Pongo abelii]
Length = 201
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 120/171 (70%), Gaps = 29/171 (16%)
Query: 88 VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNI 147
+ ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++F RAK+WVKEL
Sbjct: 53 IGVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKEL-------- 104
Query: 148 DTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSA 207
QR A PNIVIAL+GNKADL ++R V++ E ++YA++N LLFMETSA
Sbjct: 105 -------------QRQASPNIVIALSGNKADL-ANKRAVDFQEAQSYADDNSLLFMETSA 150
Query: 208 KTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETAEAPKTSNCCN 252
KT+MNVNEIF+ IAKKLPK E N+ +G G L E + P S CC+
Sbjct: 151 KTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQ-PTRSQCCS 200
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG 54
>gi|28866038|emb|CAD26971.1| Rab-related small GTP-binding protein [Simmondsia chinensis]
Length = 200
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 115/178 (64%), Gaps = 23/178 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF + T+ ++D T++FEIWDTAGQERYH LAPMYYR A AAIIVYDIT+ D+F AK W
Sbjct: 45 AAFFSHTLAVNDATVKFEIWDTAGQERYHILAPMYYRGAAAAIIVYDITSADSFALAKKW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V +ELQ+ PN+V+ALAGNKADL RR V E YA
Sbjct: 105 V---------------------QELQKQGNPNMVMALAGNKADL-EDRRSVPAEEARIYA 142
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKTSNCCN 252
E+NGL FMETSAKTA+NVNEIF EIAK+LP+ + G LV+ E + S CC+
Sbjct: 143 EDNGLFFMETSAKTALNVNEIFYEIAKRLPRAQPPQNPAGMVLVDRPPEGSRASTCCS 200
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSIS 341
KLVLLG+ GKSSL+L FV+G F E+QESTIG SH+++
Sbjct: 12 KLVLLGDMGAGKSSLLLLFVKGHFLEFQESTIGAAF-FSHTLA 53
>gi|395816588|ref|XP_003781782.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Otolemur
garnettii]
gi|410971501|ref|XP_003992207.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Felis catus]
Length = 201
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 119/170 (70%), Gaps = 29/170 (17%)
Query: 88 VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNI 147
+ ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++F RAK+WVKEL
Sbjct: 53 IGVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKEL-------- 104
Query: 148 DTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSA 207
QR A PNIVIAL+GNKADL ++R V++ E ++YA++N LLFMETSA
Sbjct: 105 -------------QRQASPNIVIALSGNKADL-ANKRAVDFQEAQSYADDNSLLFMETSA 150
Query: 208 KTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETAEAPKTSNCC 251
KT+MNVNEIF+ IAKKLPK E N+ +G G L E + P S CC
Sbjct: 151 KTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQ-PTRSQCC 199
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG 54
>gi|388515701|gb|AFK45912.1| unknown [Medicago truncatula]
Length = 200
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 120/185 (64%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+
Sbjct: 38 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDS 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+ALAG+K+DL +R V
Sbjct: 98 FSRAKKWV---------------------QELQKQGNPNMVMALAGSKSDL-EDKRDVTA 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAEENGL FMETSAK+A NVN++F EIAK+LP+ + G LV+ AE +
Sbjct: 136 EEARVYAEENGLFFMETSAKSAANVNDVFYEIAKRLPRAQPAQNPAGMVLVDRPAEGSRA 195
Query: 248 SNCCN 252
++CC+
Sbjct: 196 ASCCS 200
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|449455421|ref|XP_004145451.1| PREDICTED: ras-related protein RABF2b-like [Cucumis sativus]
Length = 199
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 120/186 (64%), Gaps = 22/186 (11%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDITNQ
Sbjct: 36 VEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ 95
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK W V+ELQ PN+V+ALAGNK+DL SR+ V
Sbjct: 96 GSFDRAKKW---------------------VQELQAQGNPNMVMALAGNKSDLLDSRK-V 133
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPK 246
+ + YA+ENGL FMETSAK+A NVN+IF EIAK+LP+ + G L AE
Sbjct: 134 AAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNTTGMVLDRPAERVA 193
Query: 247 TSNCCN 252
+++CC+
Sbjct: 194 STSCCS 199
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 45
>gi|449518960|ref|XP_004166503.1| PREDICTED: ras-related protein RABF2b-like, partial [Cucumis
sativus]
Length = 186
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 122/186 (65%), Gaps = 22/186 (11%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDITNQ
Sbjct: 23 VEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ 82
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ A N PN+V+ALAGNK+DL SR+ V
Sbjct: 83 GSFDRAKKWVQELQ--AQGN-------------------PNMVMALAGNKSDLLDSRK-V 120
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPK 246
+ + YA+ENGL FMETSAK+A NVN+IF EIAK+LP+ + G L AE
Sbjct: 121 AAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNTTGMVLDRPAERVA 180
Query: 247 TSNCCN 252
+++CC+
Sbjct: 181 STSCCS 186
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 301 VLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
VLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 1 VLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 32
>gi|225466271|ref|XP_002272169.1| PREDICTED: ras-related protein Rab5 [Vitis vinifera]
gi|147795279|emb|CAN67253.1| hypothetical protein VITISV_014431 [Vitis vinifera]
Length = 200
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 120/185 (64%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ ++
Sbjct: 38 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTES 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+ALAGNKADL R+ V
Sbjct: 98 FARAKKWV---------------------QELQKQGNPNMVMALAGNKADLEDKRK-VTA 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAEENGL F ETSAKTA+NVN+ F EIAK+LP+ + G LV+ AE+ +
Sbjct: 136 EEARVYAEENGLFFTETSAKTAVNVNDTFYEIAKRLPRAQPAQNPAGMVLVDRPAESSQA 195
Query: 248 SNCCN 252
++CC+
Sbjct: 196 ASCCS 200
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|388501294|gb|AFK38713.1| unknown [Medicago truncatula]
Length = 208
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 117/184 (63%), Gaps = 23/184 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDITN ++F RAK W
Sbjct: 45 AAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNLESFTRAKKW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V +ELQ+ PN+V+A AGNKADL R+ V E YA
Sbjct: 105 V---------------------QELQKQGNPNMVVAFAGNKADLEDKRK-VTAEEARVYA 142
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKTSNCCNTQ 254
EENGL F+ETSAKTA NVN+IF EIAKKLP+ + G LV+ AE P+ + +
Sbjct: 143 EENGLFFIETSAKTAANVNDIFYEIAKKLPRAQPAQNPAGMVLVDRPAEEPELHHVVHNY 202
Query: 255 FVQC 258
C
Sbjct: 203 LFAC 206
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|215422530|dbj|BAG85378.1| Rab5-GTP binding protein [Periplaneta americana]
Length = 213
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 122/187 (65%), Gaps = 28/187 (14%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+TQ + ++D ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDI N
Sbjct: 50 FHEYQESTIGAAFLTQPLRVEDTAVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIPN 109
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
QDTFGRAK+WVKEL + A +PP IVIALAGNKADL ++R
Sbjct: 110 QDTFGRAKNWVKELHKQA--------------------SPP-IVIALAGNKADL-ANKRV 147
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG-GRRLVETAEA 244
VE+ E + YA+EN LL METSAKT VN+IF+ IAKKLPK E G R+
Sbjct: 148 VEFEEAQQYADENRLLIMETSAKTM--VNDIFLAIAKKLPKSEAKGGAAEEHRVGAVPTQ 205
Query: 245 PKTSNCC 251
+ S CC
Sbjct: 206 QRASGCC 212
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 48/60 (80%), Gaps = 2/60 (3%)
Query: 272 SNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+N + G G QRPN Q K+CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 2 ANTPRAGGAGA--QRPNGTVQNKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 59
>gi|194381626|dbj|BAG58767.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 119/170 (70%), Gaps = 29/170 (17%)
Query: 88 VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNI 147
+ ++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++F RAK+WVKEL
Sbjct: 53 IGVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKEL-------- 104
Query: 148 DTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSA 207
QR A PNIVIAL+GNKADL ++R V++ E ++YA++N LLFMETSA
Sbjct: 105 -------------QRQASPNIVIALSGNKADL-ANKRAVDFQEAQSYADDNSLLFMETSA 150
Query: 208 KTAMNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETAEAPKTSNCC 251
KT+MNVNEIF+ IAKKLPK E N+ +G G L E + P + CC
Sbjct: 151 KTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQ-PTRNQCC 199
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Query: 286 RPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG 54
>gi|296878|emb|CAA50609.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 200
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 121/187 (64%), Gaps = 23/187 (12%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
+ F AAF +QTV ++D T++FEIWDTAGQERYH+L PMYYR A AAIIV+DITNQ
Sbjct: 36 IEFQESTIGAAFFSQTVAVNDATVKFEIWDTAGQERYHSLPPMYYRGAAAAIIVFDITNQ 95
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK W V+ELQ PN+V+ALAGNKADL +R+ V
Sbjct: 96 ASFDRAKKW---------------------VQELQAQGNPNMVMALAGNKADLLDARK-V 133
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAP 245
E + YA+ENGL FMETSAKTA NVN+IF EIA +LP+ + G L++ A+ P
Sbjct: 134 AAEEAQTYAQENGLFFMETSAKTASNVNDIFYEIANRLPRLQPAQNPSGMVLMDRPAQTP 193
Query: 246 KTSNCCN 252
+++CC+
Sbjct: 194 ASASCCS 200
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSL+LRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLLLRFVKGQFIEFQESTIGA 45
>gi|335775420|gb|AEH58566.1| Ras-related protein Rab-5A-like protein [Equus caballus]
Length = 146
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 117/167 (70%), Gaps = 29/167 (17%)
Query: 91 RFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTF 150
+FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++F RAK+WVKEL
Sbjct: 1 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKEL----------- 49
Query: 151 GRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTA 210
QR A PNIVIAL+GNKADL ++R V++ E ++YA++N LLFMETSAKT+
Sbjct: 50 ----------QRQASPNIVIALSGNKADL-ANKRAVDFQEAQSYADDNSLLFMETSAKTS 98
Query: 211 MNVNEIFVEIAKKLPKKE-----VNNGQG-GRRLVETAEAPKTSNCC 251
MNVNEIF+ IAKKLPK E N+ +G G L E + P S CC
Sbjct: 99 MNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQ-PTRSQCC 144
>gi|388491226|gb|AFK33679.1| unknown [Lotus japonicus]
Length = 200
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 119/185 (64%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+
Sbjct: 38 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDS 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+ALAGNK+DL R+ V
Sbjct: 98 FTRAKKWV---------------------QELQKQGNPNMVVALAGNKSDLEDKRK-VTP 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAE+NGL FM TSAKTA NVN++F EIAK+LP+ + G LV+ AE +
Sbjct: 136 EEARVYAEDNGLFFMGTSAKTAANVNDVFYEIAKRLPRAQPAQNPAGMVLVDRPAEGSRA 195
Query: 248 SNCCN 252
++CC+
Sbjct: 196 ASCCS 200
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGTGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|547478|emb|CAA85733.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098297|prf||2115367E small GTP-binding protein
Length = 200
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 118/185 (63%), Gaps = 23/185 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+
Sbjct: 38 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDS 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+AL GNK+DL R+ V
Sbjct: 98 FTRAKKWV---------------------QELQKQGNPNMVMALTGNKSDLEDKRK-VTA 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAPKT 247
E YAEENGL FMETSAK+A NVN++F EIAK+LP+ + G LV+ E +
Sbjct: 136 EEARVYAEENGLFFMETSAKSAANVNDVFYEIAKRLPRAQPAQNPAGMVLVDRPTEGSRA 195
Query: 248 SNCCN 252
++CC+
Sbjct: 196 ASCCS 200
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|148908627|gb|ABR17422.1| unknown [Picea sitchensis]
Length = 198
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 130/208 (62%), Gaps = 29/208 (13%)
Query: 51 IWLKDRVDCMTQIVINVV---FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D + +V+ V F+ Y S AAF +QT+ L++ TI+FEIWDTAGQERYH
Sbjct: 11 VLLGDMGAGKSSMVLRFVRGQFFEYQESTIGAAFFSQTLALNETTIKFEIWDTAGQERYH 70
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AAI+VYDIT+ D+F RAK WV+E LQR
Sbjct: 71 SLAPMYYRGAAAAIVVYDITSLDSFNRAKKWVQE---------------------LQRQG 109
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
PN+V+ LAGNKADL T++R VE E +AYA ENGL F+ETSAKTA NVNE+F +IAK++
Sbjct: 110 NPNMVMTLAGNKADL-TAKRKVELEEAQAYATENGLFFIETSAKTAQNVNELFYDIAKRV 168
Query: 225 PKKEVNNGQGGRRLV-ETAEAPKTSNCC 251
K + G L + E + S+CC
Sbjct: 169 LKARPDKSTPGLLLGNRSEEGSRFSSCC 196
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSS+VLRFVRGQF EYQESTIG
Sbjct: 9 KLVLLGDMGAGKSSMVLRFVRGQFFEYQESTIGA 42
>gi|159477721|ref|XP_001696957.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158274869|gb|EDP00649.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 202
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 123/189 (65%), Gaps = 30/189 (15%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+T+T L ++ ++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+
Sbjct: 38 FFDYQASTVGAAFLTKT--LPELNVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITS 95
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
D+F RAKSWV+ ELQR PN+++ALAGNKADL +R
Sbjct: 96 PDSFTRAKSWVR---------------------ELQRQGNPNMIMALAGNKADL-EGQRA 133
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV--NNGQGGRRLVET-A 242
V E +AYA ENGL ++ETSAKT+ NVNE+F EIA+KLPK E QGG L E
Sbjct: 134 VTVEEAQAYAAENGLFYVETSAKTSANVNELFEEIARKLPKPEAAPRPPQGGIVLSENQQ 193
Query: 243 EAPKTSNCC 251
+ PK S CC
Sbjct: 194 QQPKKSTCC 202
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 28/34 (82%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE GKSSLVLR+V+GQF +YQ ST+G
Sbjct: 15 KLVLLGEMGSGKSSLVLRYVKGQFFDYQASTVGA 48
>gi|302833012|ref|XP_002948070.1| RabF/Rab5 [Volvox carteri f. nagariensis]
gi|300266872|gb|EFJ51058.1| RabF/Rab5 [Volvox carteri f. nagariensis]
Length = 203
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 126/190 (66%), Gaps = 31/190 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ Y S AAF+T+T L ++ ++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+
Sbjct: 38 FFDYQASTVGAAFLTKT--LPELNVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITS 95
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
D+F RAKSW V+ELQR P +++ALAGNKADL S+R
Sbjct: 96 PDSFTRAKSW---------------------VRELQRQGNPVMIMALAGNKADL-ESQRA 133
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV--NNGQGGRRLVETAE 243
V EG+AYA ENGL ++ETSAKTA NVNE+F EIA+KLPK E QGG ++E +
Sbjct: 134 VSVEEGQAYAAENGLYYLETSAKTAANVNELFEEIARKLPKPETAPRPVQGGGIVLENQQ 193
Query: 244 AP--KTSNCC 251
A K S+CC
Sbjct: 194 AQDRKKSSCC 203
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 28/34 (82%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE GKSSLVLR+V+GQF +YQ ST+G
Sbjct: 15 KLVLLGEMGSGKSSLVLRYVKGQFFDYQASTVGA 48
>gi|116782322|gb|ABK22463.1| unknown [Picea sitchensis]
gi|116793226|gb|ABK26663.1| unknown [Picea sitchensis]
gi|224284237|gb|ACN39854.1| unknown [Picea sitchensis]
Length = 200
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 131/209 (62%), Gaps = 29/209 (13%)
Query: 51 IWLKDRVDCMTQIVINVV---FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D + +V+ V F+ Y S AAF +QT+ +++ +++ EIWDTAGQERYH
Sbjct: 14 VLLGDMGAGKSSLVLRFVKGQFFAYQESTIGAAFFSQTLAVNETSVKLEIWDTAGQERYH 73
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AAIIVYDITN D+F RAK WV +ELQ+
Sbjct: 74 SLAPMYYRGAAAAIIVYDITNLDSFVRAKKWV---------------------QELQKQG 112
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
PN+V+ALAGNK+D+ + V E + YA+ENGL FMETSAKTA NVNE+F EIA++L
Sbjct: 113 NPNMVMALAGNKSDM-IEKSKVSPEEAKVYAQENGLFFMETSAKTAQNVNELFYEIARRL 171
Query: 225 PKKEVNNGQGGRRLVE-TAEAPKTSNCCN 252
PK E G L + +AE ++S+CC+
Sbjct: 172 PKAEPVQHPAGMVLADRSAERARSSSCCS 200
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 30/39 (76%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K Q KLVLLG+ GKSSLVLRFV+GQF YQESTIG
Sbjct: 7 KNVQAKLVLLGDMGAGKSSLVLRFVKGQFFAYQESTIGA 45
>gi|266879|sp|P29687.1|RAB5_TOBAC RecName: Full=Ras-related protein Rab5
gi|19986|emb|CAA45352.1| Nt-rab5 [Nicotiana tabacum]
Length = 200
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 132/221 (59%), Gaps = 30/221 (13%)
Query: 39 MSGKRQSDCMAQ-IWLKDRVDCMTQIVINVV------FYPYLFSAAFITQTVCLDDVTIR 91
M+ +R ++ A+ + L D + +VI V F AAF + TV +++ T++
Sbjct: 1 MASRRHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVK 60
Query: 92 FEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFG 151
FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ ++
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITS---------------------TESLA 99
Query: 152 RAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAM 211
RAK WV+ELQ+ PN+V+ALAGNKADL R+ V E YAEENGL FMETSAKTA
Sbjct: 100 RAKKWVQELQKQGNPNMVMALAGNKADLEDKRK-VTAEEARLYAEENGLFFMETSAKTAT 158
Query: 212 NVNEIFVEIAKKLPKKEVNNGQGGRRLVET-AEAPKTSNCC 251
NVN+IF EIAK+LP+ + G L + A+ + ++CC
Sbjct: 159 NVNDIFYEIAKRLPRAQPAQNPAGMVLEDKPAQGSQAASCC 199
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 31/39 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSS 337
KLVLLG+ GKSSLV+RFV+GQF E+QESTIG SS
Sbjct: 12 KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSS 50
>gi|397569787|gb|EJK46965.1| hypothetical protein THAOC_34347 [Thalassiosira oceanica]
Length = 206
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 110/153 (71%), Gaps = 10/153 (6%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTV LDD T++FEIWDTAGQERY +LAPMYYR A AAIIVYDITN D+F AKSW
Sbjct: 43 AAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIIVYDITNPDSFAGAKSW 102
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKELQR N+ V + + +++ AGNKADL +RR V+++E YA
Sbjct: 103 VKELQRRGDQNV---------VIAMLTGSESDLITRQAGNKADL-EARRKVDFNEANDYA 152
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
EENG+L METSAK A NV +FVEIAKKLPK +
Sbjct: 153 EENGILHMETSAKNANNVKSLFVEIAKKLPKAQ 185
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ +++C +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 2 SNSRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 43
>gi|298705900|emb|CBJ29030.1| Rab5, RAB family GTPase [Ectocarpus siliculosus]
Length = 195
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 113/175 (64%), Gaps = 25/175 (14%)
Query: 59 CMTQIVINVVFYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQ 115
C+ + F+ Y AAF+TQ V LDD T++FEIWDTAGQERY +LAPMYYR A
Sbjct: 23 CLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAA 82
Query: 116 AAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGN 175
AAI+VYD+TN+++F AKSWVKE LQR PN++IALAGN
Sbjct: 83 AAIVVYDVTNKESFNGAKSWVKE---------------------LQRRGDPNVIIALAGN 121
Query: 176 KADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN 230
KADL RR V+ E YAE+NGL+ METSAK+A NV IFVEIA+KLPK V
Sbjct: 122 KADL-EHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQ 175
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ ++C +KLVLLG++AVGKS LV+RFVR +F EYQE TIG
Sbjct: 2 SSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGA 43
>gi|223995249|ref|XP_002287308.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220976424|gb|EED94751.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 193
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 107/151 (70%), Gaps = 22/151 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTV LDD T++FEIWDTAGQERY +LAPMYYR A AAI+VYDITN D+F AKSW
Sbjct: 42 AAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNPDSFAGAKSW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKELQR ++VIA+AGNKADL +RR V++ E AYA
Sbjct: 102 ---------------------VKELQRRGDQDVVIAMAGNKADL-EARRQVDFEEANAYA 139
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
EENG+L METSAK A NV +FVEIA++LPK
Sbjct: 140 EENGILHMETSAKNANNVKALFVEIARRLPK 170
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
++C +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 4 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 42
>gi|422294642|gb|EKU21942.1| Ras-related protein Rab-5C, partial [Nannochloropsis gaditana
CCMP526]
Length = 261
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 110/171 (64%), Gaps = 24/171 (14%)
Query: 59 CMTQIVINVVFYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQ 115
C+ + F+ Y AAF+TQ V L+D T++FEIWDTAGQERY +LAPMYYR A
Sbjct: 89 CLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMYYRGAS 148
Query: 116 AAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGN 175
AAI+VYDITN ++F AKSWVK ELQR P+++IALAGN
Sbjct: 149 AAIVVYDITNAESFKGAKSWVK---------------------ELQRRGDPSVIIALAGN 187
Query: 176 KADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
KADL +RR V+ + E YA ENGLL ETSAK A NV +FVEIAK+LPK
Sbjct: 188 KADLAGTRRKVDLKDAEEYARENGLLHFETSAKDAQNVKTLFVEIAKRLPK 238
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 14/65 (21%)
Query: 268 TMANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQE 327
TM + S+SN R +C +KLVLLG++AVGKS LV+RFVR +F EYQE
Sbjct: 59 TMTSGGGSSSNNR--------------VCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQE 104
Query: 328 STIGG 332
TIG
Sbjct: 105 PTIGA 109
>gi|255075421|ref|XP_002501385.1| predicted protein [Micromonas sp. RCC299]
gi|226516649|gb|ACO62643.1| predicted protein [Micromonas sp. RCC299]
Length = 202
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/187 (51%), Positives = 122/187 (65%), Gaps = 30/187 (16%)
Query: 51 IWLKDRVDCMTQIVINVV---FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D + +V+ V F+ Y S AAF+TQTV + D T++FEIWDTAGQERYH
Sbjct: 12 VLLGDMGAGKSSLVLRFVKGQFFEYQESTIGAAFLTQTVSVSDATVKFEIWDTAGQERYH 71
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AAIIVYDI + +F RAKSWV+ELQR G A
Sbjct: 72 SLAPMYYRGAAAAIIVYDIQSPSSFERAKSWVRELQRQ--------GNA----------- 112
Query: 165 PPNIVIALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIA 221
N+V+ALAGNKAD+ +R V+ E +AYA+ENGL FMETSA+TA NVN++F EIA
Sbjct: 113 --NLVMALAGNKADIAEKEPEKRKVDADEAQAYADENGLFFMETSARTAANVNDLFYEIA 170
Query: 222 KKLPKKE 228
+KLP+ E
Sbjct: 171 RKLPRAE 177
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q KLVLLG+ GKSSLVLRFV+GQF EYQESTIG
Sbjct: 6 VMQAKLVLLGDMGAGKSSLVLRFVKGQFFEYQESTIGA 43
>gi|212275548|ref|NP_001130433.1| uncharacterized protein LOC100191530 [Zea mays]
gi|194689106|gb|ACF78637.1| unknown [Zea mays]
gi|414869113|tpg|DAA47670.1| TPA: ras protein RHN1 [Zea mays]
Length = 204
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 124/190 (65%), Gaps = 29/190 (15%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 38 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNA 97
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ A N N ++ALAGNKADL +R+ V
Sbjct: 98 ASFTRAKKWVQELQ--AQGN-------------------SNTIVALAGNKADLLDTRQ-V 135
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQGGRRLVETAEAP 245
E +AYA+ENGL FMETSAKTA NVN++F EIAKKL + ++V N QGG +V P
Sbjct: 136 SADEAKAYAQENGLFFMETSAKTATNVNDVFYEIAKKLLQGQQVQNPQGG--MVLNQRPP 193
Query: 246 K----TSNCC 251
+ +S+CC
Sbjct: 194 ERMVSSSSCC 203
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 9 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIG 46
>gi|297800092|ref|XP_002867930.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
gi|297313766|gb|EFH44189.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 121/186 (65%), Gaps = 23/186 (12%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIV+D+TNQ
Sbjct: 36 VEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQ 95
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ A N PN+V+ALAGNK+DL +R+ V
Sbjct: 96 ASFERAKKWVQELQ--AQGN-------------------PNMVMALAGNKSDLLDARK-V 133
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETA-EAP 245
E + YA+ENGL FMETSAKTA NV EIF EIA++LP+ + G L + A +
Sbjct: 134 TAEEAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAMDRA 193
Query: 246 KTSNCC 251
+S+CC
Sbjct: 194 VSSSCC 199
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGA 45
>gi|224115414|ref|XP_002332129.1| predicted protein [Populus trichocarpa]
gi|222875179|gb|EEF12310.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 121/187 (64%), Gaps = 23/187 (12%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDI+NQ
Sbjct: 36 VEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDISNQ 95
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK W V+ELQ PN+V+ALAGNKADL +R+ V
Sbjct: 96 ASFERAKKW---------------------VQELQAQGNPNMVMALAGNKADLLDARK-V 133
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE-TAEAP 245
E + YA+E GL F+ETSAKTA NVN+IF EIAK+LP+ + G L++ E+
Sbjct: 134 TAEEAQVYAQEYGLFFIETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPTEST 193
Query: 246 KTSNCCN 252
+++CC+
Sbjct: 194 ASASCCS 200
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 45
>gi|348677560|gb|EGZ17377.1| hypothetical protein PHYSODRAFT_346157 [Phytophthora sojae]
Length = 197
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 116/177 (65%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV L+D +T++FEIWDTAGQERY +LAPMYYR A AAI+VYD+TN+D+F AKS
Sbjct: 43 AAFLTQTVGLEDGLTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKS 102
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVKE LQR PN+VIALAGNKADL +RR VE+ E Y
Sbjct: 103 WVKE---------------------LQRRGDPNVVIALAGNKADL-EARRKVEFEEAHQY 140
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
AE+N +L METSAKTA+NV ++FV IAK+LPK + + + S CC
Sbjct: 141 AEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPPQPEREAFPITPPQASKSKSGCC 197
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+Q K C +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 2 SQGKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 43
>gi|15235113|ref|NP_193699.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75337446|sp|Q9SN68.1|RAF2B_ARATH RecName: Full=Ras-related protein RABF2b; Short=AtRABF2b; AltName:
Full=Ras-related protein Ara-7; AltName:
Full=Ras-related protein Rab5B; Short=AtRab5B
gi|13878093|gb|AAK44124.1|AF370309_1 putative small GTP-binding protein [Arabidopsis thaliana]
gi|2853090|emb|CAA16940.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7268760|emb|CAB78966.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|12964606|dbj|BAB32669.1| Ara7 [Arabidopsis thaliana]
gi|15450605|gb|AAK96574.1| AT4g19640/F24J7_190 [Arabidopsis thaliana]
gi|17104761|gb|AAL34269.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|332658807|gb|AEE84207.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 200
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 121/186 (65%), Gaps = 23/186 (12%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIV+D+TNQ
Sbjct: 36 VEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQ 95
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ A N PN+V+ALAGNK+DL +R+ V
Sbjct: 96 ASFERAKKWVQELQ--AQGN-------------------PNMVMALAGNKSDLLDARK-V 133
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETA-EAP 245
+ + YA+ENGL FMETSAKTA NV EIF EIA++LP+ + G L + A +
Sbjct: 134 TAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAMDRA 193
Query: 246 KTSNCC 251
+S+CC
Sbjct: 194 VSSSCC 199
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGA 45
>gi|255626087|gb|ACU13388.1| unknown [Glycine max]
Length = 204
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 108/165 (65%), Gaps = 22/165 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ D+F RAK W
Sbjct: 45 AAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V +ELQ+ PN+V+ALAGNKADL R+ V E YA
Sbjct: 105 V---------------------QELQKQGNPNMVMALAGNKADLEDKRK-VTAEEARVYA 142
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE 240
EENGL FMETSAKTA NVN+IF EIAK + + G LV+
Sbjct: 143 EENGLFFMETSAKTASNVNDIFYEIAKSYQRAQPAQNPAGMVLVD 187
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|15242309|ref|NP_199326.1| Ras-related protein RHA1 [Arabidopsis thaliana]
gi|297794787|ref|XP_002865278.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|400976|sp|P31582.1|RAF2A_ARATH RecName: Full=Ras-related protein RABF2a; Short=AtRABF2a; AltName:
Full=Ras-related protein Rab5A; Short=AtRab5A; AltName:
Full=Ras-related protein Rha1
gi|14488100|gb|AAK63870.1|AF389298_1 AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|16484|emb|CAA41863.1| RHA1 [Arabidopsis thaliana]
gi|397594|emb|CAA80534.1| GTP-binding protein [Arabidopsis thaliana]
gi|9758988|dbj|BAB09498.1| ras-related GTP-binding protein RHA1 [Arabidopsis thaliana]
gi|20453279|gb|AAM19878.1| AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|297311113|gb|EFH41537.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|332007825|gb|AED95208.1| Ras-related protein RHA1 [Arabidopsis thaliana]
Length = 200
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 114/185 (61%), Gaps = 22/185 (11%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIV+DITNQ
Sbjct: 36 VEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQ 95
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK W V+ELQ PN+V+ALAGNKADL +R+ V
Sbjct: 96 ASFERAKKW---------------------VQELQAQGNPNMVMALAGNKADLLDARK-V 133
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPK 246
E E YA+EN L FMETSAKTA NV +IF EIAK+LP+ + G L A
Sbjct: 134 SAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPRVQPAENPTGMVLPNGPGATA 193
Query: 247 TSNCC 251
S+ C
Sbjct: 194 VSSSC 198
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGA 45
>gi|71013586|ref|XP_758632.1| hypothetical protein UM02485.1 [Ustilago maydis 521]
gi|46098290|gb|EAK83523.1| hypothetical protein UM02485.1 [Ustilago maydis 521]
Length = 221
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 110/159 (69%), Gaps = 22/159 (13%)
Query: 76 AAFITQTVCLD-DVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LD T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT
Sbjct: 47 AAFLTQTVSLDAQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQ--------- 97
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
P ++D +AK+W++ELQR A PNI+IALAGNKADL ++RR + E E Y
Sbjct: 98 ---------PSSLD---KAKAWIRELQRQADPNIIIALAGNKADLASTRRAIPTEEAEKY 145
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ 233
A+E GLLF+ETSAK + NV+E+F IA+KLP ++ Q
Sbjct: 146 AQEEGLLFLETSAKNSSNVSELFTMIARKLPTEQAAESQ 184
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 12 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 47
>gi|118482090|gb|ABK92976.1| unknown [Populus trichocarpa]
Length = 200
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 118/187 (63%), Gaps = 23/187 (12%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDI+NQ
Sbjct: 36 VEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDISNQ 95
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK W V+ELQ PN+V+ALAGNKADL +R+ V
Sbjct: 96 ASFERAKKW---------------------VQELQAQGNPNMVMALAGNKADLLDARK-V 133
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQGGRRLVETAEAP 245
E + +A+ENGL FMETSAKTA NVN+IF EIAK+L + + N G + E
Sbjct: 134 AAEEAQVFAQENGLFFMETSAKTATNVNDIFYEIAKRLSQVQPAPNPSGMVIMDRPTERT 193
Query: 246 KTSNCCN 252
++ CC+
Sbjct: 194 ASAACCS 200
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 45
>gi|343427700|emb|CBQ71227.1| probable GTP-binding protein ypt5 [Sporisorium reilianum SRZ2]
Length = 221
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 111/159 (69%), Gaps = 22/159 (13%)
Query: 76 AAFITQTVCLD-DVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LD T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT
Sbjct: 47 AAFLTQTVSLDAQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQ--------- 97
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
P ++D +AK+W++ELQR A PNI+IALAGNKADL ++RR + E E Y
Sbjct: 98 ---------PSSLD---KAKAWIRELQRQADPNIIIALAGNKADLASTRRAIPTEEAEKY 145
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ 233
A+E GLLF+ETSAK + NV+E+F IA+KLP ++ + Q
Sbjct: 146 AQEEGLLFLETSAKDSSNVSELFTMIARKLPLEQAADSQ 184
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 12 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 47
>gi|357119478|ref|XP_003561466.1| PREDICTED: ras-related protein RABF2b-like [Brachypodium
distachyon]
Length = 203
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 119/189 (62%), Gaps = 25/189 (13%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ + D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDI+NQ
Sbjct: 37 VEFQESTIGAAFFSQTLAVSDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDISNQ 96
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK W V+ELQ PN V+ALAGNKADL +R+ V
Sbjct: 97 ASFIRAKKW---------------------VQELQAQGNPNTVVALAGNKADLLETRQ-V 134
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-VNNGQGGRRLVE--TAE 243
+ E + YA+ENGL FMETSAKTA NVN+IF EIAK+L + + N Q G L +
Sbjct: 135 QIEEAKTYAQENGLFFMETSAKTATNVNDIFYEIAKRLLQGQPAQNPQAGMVLSQRPNER 194
Query: 244 APKTSNCCN 252
+++CC+
Sbjct: 195 VVSSASCCS 203
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI K+VLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKVVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 46
>gi|168988599|pdb|2EFC|B Chain B, Ara7-GdpATVPS9A
gi|168988601|pdb|2EFC|D Chain D, Ara7-GdpATVPS9A
gi|168988603|pdb|2EFD|B Chain B, Ara7ATVPS9A
gi|168988605|pdb|2EFD|D Chain D, Ara7ATVPS9A
gi|168988607|pdb|2EFE|B Chain B, Ara7-Gdpnh2ATVPS9A
gi|168988609|pdb|2EFE|D Chain D, Ara7-Gdpnh2ATVPS9A
gi|168988611|pdb|2EFH|B Chain B, Ara7-GdpATVPS9A(D185N)
gi|168988613|pdb|2EFH|D Chain D, Ara7-GdpATVPS9A(D185N)
gi|453056092|pdb|4G01|B Chain B, Ara7-gdp-ca2+/vps9a
Length = 181
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 110/160 (68%), Gaps = 22/160 (13%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIV+D+TNQ
Sbjct: 38 VEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQ 97
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ A N PN+V+ALAGNK+DL +R+ V
Sbjct: 98 ASFERAKKWVQELQ--AQGN-------------------PNMVMALAGNKSDLLDARK-V 135
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
+ + YA+ENGL FMETSAKTA NV EIF EIA++LP+
Sbjct: 136 TAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 175
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 29/39 (74%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K KLVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 9 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGA 47
>gi|358055034|dbj|GAA98803.1| hypothetical protein E5Q_05491 [Mixia osmundae IAM 14324]
Length = 198
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 113/179 (63%), Gaps = 24/179 (13%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQ V LD+ TI+FEIWDTAGQERY +LAPMYYR AQAA++VYDIT++ T +AK+
Sbjct: 41 AAFLTQIVSLDENTTIKFEIWDTAGQERYRSLAPMYYRGAQAAVVVYDITSEGTLDKAKA 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVKE LQR A P+IVIALAGNK DL +RR + E Y
Sbjct: 101 WVKE---------------------LQRQADPSIVIALAGNKVDLAETRRAIPRETAEKY 139
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP--KKEVNNGQGGRRLVETAEAPKTSNCC 251
A+E GLLF ETSAK A NV E+F E+A K+P + G+G L +A+ P S C
Sbjct: 140 AQEEGLLFFETSAKEATNVTELFKELATKMPLDRAAAQPGRGRVDLDTSAKGPLDSCAC 198
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+KLVLLGESA GKSSLVL+FV+ +F EY+ESTIG
Sbjct: 7 FKLVLLGESACGKSSLVLQFVKQEFSEYRESTIGA 41
>gi|225445266|ref|XP_002284542.1| PREDICTED: ras-related protein RHN1 isoform 1 [Vitis vinifera]
gi|359484588|ref|XP_003633124.1| PREDICTED: ras-related protein RHN1 isoform 2 [Vitis vinifera]
gi|297738837|emb|CBI28082.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 115/182 (63%), Gaps = 28/182 (15%)
Query: 51 IWLKDRVDCMTQIVINVV---FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D T +V+ V FY + S AAF TQ + L++ TI+F+IWDTAGQERYH
Sbjct: 14 VLLGDMGTGKTSLVLRFVKGQFYDFQESTIGAAFFTQVLSLNEATIKFDIWDTAGQERYH 73
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AA++VYDIT+ D+F RAK WV+E LQR
Sbjct: 74 SLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQE---------------------LQRQG 112
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
PN+++ L NKADL T R VE +GE YA+ENGLLF ETSAKTA NVNE+F EIAK L
Sbjct: 113 NPNLLMILVANKADLETKRE-VENEKGEQYAKENGLLFFETSAKTAQNVNELFYEIAKNL 171
Query: 225 PK 226
K
Sbjct: 172 AK 173
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 290 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+T K Q KLVLLG+ GK+SLVLRFV+GQF+++QESTIG
Sbjct: 3 RTGNKNIQAKLVLLGDMGTGKTSLVLRFVKGQFYDFQESTIG 44
>gi|300175460|emb|CBK20771.2| unnamed protein product [Blastocystis hominis]
Length = 196
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 112/171 (65%), Gaps = 25/171 (14%)
Query: 59 CMTQIVINVVFYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQ 115
C+ + F+P+ AAF+TQTV +D+VTI+FEIWDTAGQERY +LAPMYYR A
Sbjct: 22 CLVVRFVRDEFFPFQEPTIGAAFLTQTVNVDNVTIKFEIWDTAGQERYRSLAPMYYRGAA 81
Query: 116 AAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGN 175
AAI+VYDIT++++F AK+WVKE LQR PN+VIALAGN
Sbjct: 82 AAIVVYDITSRESFNGAKTWVKE---------------------LQRRGDPNVVIALAGN 120
Query: 176 KADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
K DL +R+ + E E YA ENGLLFMETSAK A+NV EIF I KLPK
Sbjct: 121 KCDLEENRQ-IPREEAEEYAVENGLLFMETSAKMALNVREIFESIGHKLPK 170
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+KLVLLG++AVGKS LV+RFVR +F +QE TIG
Sbjct: 7 HFKLVLLGDTAVGKSCLVVRFVRDEFFPFQEPTIGA 42
>gi|443897405|dbj|GAC74746.1| GTPase Rab5/YPT51 [Pseudozyma antarctica T-34]
Length = 221
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 110/159 (69%), Gaps = 22/159 (13%)
Query: 76 AAFITQTVCLD-DVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LD T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT
Sbjct: 46 AAFLTQTVSLDAQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQ--------- 96
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
P ++D +AK+W++ELQR A PNI+IALAGNKADL ++RR V E E Y
Sbjct: 97 ---------PSSLD---KAKAWIRELQRQADPNIIIALAGNKADLASTRRAVATEEAEKY 144
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ 233
A+E LLF+ETSAK + NV+E+F IA+KLP ++ + Q
Sbjct: 145 AQEENLLFLETSAKDSSNVSELFTMIARKLPLEQAADSQ 183
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 35/39 (89%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 8 RMLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 46
>gi|224142139|ref|XP_002324416.1| predicted protein [Populus trichocarpa]
gi|222865850|gb|EEF02981.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 120/208 (57%), Gaps = 28/208 (13%)
Query: 51 IWLKDRVDCMTQIVINVV------FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D T +V+ V F AAF TQ + L++ TI+F+IWDTAGQERYH
Sbjct: 14 VLLGDMGTGKTSLVLRFVKGQFLEFQESTIGAAFFTQVLSLNEATIKFDIWDTAGQERYH 73
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AA++VYDIT+ D+F RAK WV ELQR PN+ F
Sbjct: 74 SLAPMYYRGAAAAVVVYDITSMDSFERAKKWVTELQRQGNPNLIMF-------------- 119
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
L GNK DL R+ V EGE YA+ENG++F+ETSAKTA NVNE+F EIAK+L
Sbjct: 120 -------LVGNKVDLQQKRK-VGIEEGEQYAKENGMVFLETSAKTAQNVNELFYEIAKRL 171
Query: 225 PKKEVNNGQGGRRLVETAEAPKTSNCCN 252
KK + G + E + CC+
Sbjct: 172 AKKAPSRPIGMKLHRRPQETRRRMFCCS 199
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 30/36 (83%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q KLVLLG+ GK+SLVLRFV+GQF E+QESTIG
Sbjct: 10 QAKLVLLGDMGTGKTSLVLRFVKGQFLEFQESTIGA 45
>gi|345560497|gb|EGX43622.1| hypothetical protein AOL_s00215g358 [Arthrobotrys oligospora ATCC
24927]
Length = 216
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 120/189 (63%), Gaps = 28/189 (14%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 50 AAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKA 109
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WV KELQR A +IVIALAGNK DL T S+R +E ++
Sbjct: 110 WV---------------------KELQRQANESIVIALAGNKLDLATANPSKRAIETADA 148
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN--NGQGGRRLVETAEAPKTSN 249
EAYA+E GLLF+ETSAKTA NV E+F IA+KLP + G G R V+ P+T+N
Sbjct: 149 EAYAKEAGLLFLETSAKTAENVQELFTAIARKLPTDQAGPRRGAPGIRGVDMNRTPQTAN 208
Query: 250 CCNTQFVQC 258
N Q C
Sbjct: 209 -LNGQGCAC 216
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 34/39 (87%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 12 RFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 50
>gi|357153419|ref|XP_003576446.1| PREDICTED: ras-related protein RABF2b-like [Brachypodium
distachyon]
Length = 206
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 114/173 (65%), Gaps = 23/173 (13%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 39 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNA 98
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ A N PN V+ALAGNKAD+ +R+ V
Sbjct: 99 ASFTRAKKWVQELQ--AQGN-------------------PNTVMALAGNKADMLEARQ-V 136
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQGGRRL 238
E + YA+ENGL FMETSAKTA NVN++F EIAK+L + ++ N Q G L
Sbjct: 137 PMEEAKTYAQENGLFFMETSAKTATNVNDVFYEIAKRLLQGQQAQNPQAGMVL 189
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 9 SKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 48
>gi|224134314|ref|XP_002321789.1| predicted protein [Populus trichocarpa]
gi|222868785|gb|EEF05916.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 117/187 (62%), Gaps = 23/187 (12%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDI+NQ
Sbjct: 36 VEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDISNQ 95
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK W V+ELQ PN+V+ALAGNKADL +R+ V
Sbjct: 96 ASFERAKKW---------------------VQELQAQGNPNMVMALAGNKADLLDARK-V 133
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQGGRRLVETAEAP 245
+ +A+ENGL FMETSAKTA NVN+IF EIAK+L + + N G + E
Sbjct: 134 AAEATQVFAQENGLFFMETSAKTATNVNDIFYEIAKRLSQVQPAPNPSGMVIMDRPTERT 193
Query: 246 KTSNCCN 252
++ CC+
Sbjct: 194 ASAACCS 200
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 45
>gi|323448788|gb|EGB04682.1| hypothetical protein AURANDRAFT_55091 [Aureococcus anophagefferens]
Length = 195
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 107/151 (70%), Gaps = 22/151 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ+V L++ T++FEIWDTAGQERY +LAPMYYR A AAI+VYDITN+++F AKSW
Sbjct: 43 AAFLTQSVNLENATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNKESFNGAKSW 102
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE LQR PN++IALAGNKADL RR VE E + Y+
Sbjct: 103 VKE---------------------LQRRGDPNVIIALAGNKADLQNKRR-VESEEAKQYS 140
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
EENG+L METSAK A +V ++F EIA+KLPK
Sbjct: 141 EENGILHMETSAKNATHVKDLFQEIARKLPK 171
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
++C +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 5 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 43
>gi|388858617|emb|CCF47914.1| probable GTP-binding protein ypt5 [Ustilago hordei]
Length = 223
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 110/159 (69%), Gaps = 22/159 (13%)
Query: 76 AAFITQTVCLD-DVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LD T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT
Sbjct: 46 AAFLTQTVSLDAQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQ--------- 96
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
P ++D +AK+W++ELQR A PNI+IALAGNKADL ++RR + E + Y
Sbjct: 97 ---------PSSLD---KAKAWIRELQRQADPNIIIALAGNKADLASTRRAIPTEEADKY 144
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ 233
A+E LLF+ETSAK + NV+E+F IA+KLP ++ + Q
Sbjct: 145 AQEEELLFLETSAKDSSNVSELFTMIARKLPLEQAADSQ 183
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 290 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q ++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 4 QRNPRMLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 46
>gi|255546521|ref|XP_002514320.1| protein with unknown function [Ricinus communis]
gi|223546776|gb|EEF48274.1| protein with unknown function [Ricinus communis]
Length = 199
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 119/208 (57%), Gaps = 28/208 (13%)
Query: 51 IWLKDRVDCMTQIVINVV------FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D T +V+ V F AAF TQ + L++ TI+F+IWDTAGQERYH
Sbjct: 14 VLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEATIKFDIWDTAGQERYH 73
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AA++VYDIT+ D+F RAK WV ELQR PN+ F
Sbjct: 74 SLAPMYYRGAAAAVVVYDITSTDSFERAKRWVLELQRQGNPNLIMF-------------- 119
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
LA NK DL R+ V EGE YA+ENGL+F+ETSAKTA NVNE+F EIAKKL
Sbjct: 120 -------LAANKVDLGDKRK-VASEEGEQYAKENGLVFLETSAKTAQNVNELFYEIAKKL 171
Query: 225 PKKEVNNGQGGRRLVETAEAPKTSNCCN 252
K + G + E + CC+
Sbjct: 172 AKAAPSRPTGMKLQNRQPERSRGMFCCS 199
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
Query: 284 IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ RPN+ K Q KLVLLG+ GK+SLVLRFV+GQF ++QESTIG
Sbjct: 1 MARPNN----KNIQAKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGA 45
>gi|115489706|ref|NP_001067340.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|12057010|emb|CAC19792.1| RAB5A protein [Oryza sativa Indica Group]
gi|108863007|gb|ABG22102.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113649847|dbj|BAF30359.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|215686475|dbj|BAG87736.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 119/195 (61%), Gaps = 37/195 (18%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 37 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNA 96
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK W V+ELQ PN ++ALAGNKAD+ +R+ V
Sbjct: 97 ASFTRAKKW---------------------VQELQAQGNPNTIMALAGNKADMVEARQ-V 134
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL---------PKKEVNNGQGGRR 237
E + YA+ENGL FMETSAKTA+NVN++F EIAK+L P V N + R
Sbjct: 135 PAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTPAGMVLNQRPAER 194
Query: 238 LVETAEAPKTSNCCN 252
+V +S+CC+
Sbjct: 195 MV------SSSSCCS 203
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGA 46
>gi|357521023|ref|XP_003630800.1| Ras-related protein Rab-5C [Medicago truncatula]
gi|355524822|gb|AET05276.1| Ras-related protein Rab-5C [Medicago truncatula]
Length = 190
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 123/208 (59%), Gaps = 28/208 (13%)
Query: 50 QIWLKDRVDCMTQIVINVV---FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERY 103
Q+ L D T +V+ V F Y S AAF TQ + L++ T++F+IWDTAGQERY
Sbjct: 4 QVLLGDMGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERY 63
Query: 104 HTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRM 163
H+LAPMYYR + AAI+VYDIT+ D+F RAK WV+E +QR
Sbjct: 64 HSLAPMYYRGSAAAIVVYDITSMDSFVRAKKWVRE---------------------VQRQ 102
Query: 164 APPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKK 223
A PN+++ L NKADL R+ V EGE YA+ENG+ F ETSAKTA NVNE+F EIAK+
Sbjct: 103 ANPNLIMLLVANKADLEDQRK-VGNEEGEEYAKENGMSFFETSAKTAQNVNELFYEIAKR 161
Query: 224 LPKKEVNNGQGGRRLVETAEAPKTSNCC 251
L K + G + T E + CC
Sbjct: 162 LAKANPSRQTGIKLHGRTQETRRRLFCC 189
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 301 VLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
VLLG+ GK+SLVLRFV+GQF EYQESTIG
Sbjct: 5 VLLGDMGTGKTSLVLRFVKGQFSEYQESTIGA 36
>gi|326491951|dbj|BAJ98200.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 120/190 (63%), Gaps = 25/190 (13%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 42 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNA 101
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
F RAK WV+ELQ A N PN V+ALAGNKAD+ +R+ V
Sbjct: 102 APFTRAKKWVQELQ--AQGN-------------------PNTVMALAGNKADMLEARQ-V 139
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKK-LPKKEVNNGQGGRRLVE--TAE 243
E YA+ENGL FMETSAKTA+NVN++F EIAK+ L ++ N Q G L +
Sbjct: 140 PVEEATTYAQENGLFFMETSAKTAINVNDVFYEIAKRLLAGQQAQNPQAGMVLSQRPAER 199
Query: 244 APKTSNCCNT 253
+++CC++
Sbjct: 200 MVSSTSCCSS 209
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 SKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGA 51
>gi|303279212|ref|XP_003058899.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460059|gb|EEH57354.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 195
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 130/207 (62%), Gaps = 27/207 (13%)
Query: 51 IWLKDRVDCMTQIVINVV---FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D + +V+ V F+ Y AAF+TQ V ++D T++FEIWDTAGQERYH
Sbjct: 9 VLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAAFLTQCVAVNDATVKFEIWDTAGQERYH 68
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AAIIVYDI++Q +F RAKS WVKELQR
Sbjct: 69 SLAPMYYRGAAAAIIVYDISSQSSFARAKS---------------------WVKELQRQG 107
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
++V+ALAGNKADL +R VE SE EAYAEENGL FMETSAKTA NVN++F EIA+KL
Sbjct: 108 NASLVMALAGNKADLSAEKREVEASEAEAYAEENGLFFMETSAKTAANVNDLFYEIARKL 167
Query: 225 PKKEVNNGQGGRRLVETAEAPKTSNCC 251
P+ + ++++ +T + C
Sbjct: 168 PRTAAPSTPAPGVVLDSRRGAQTKSAC 194
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q KLVLLG+ GKSSLVLRFV+GQF +YQESTIG
Sbjct: 3 VMQAKLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGA 40
>gi|226498408|ref|NP_001147694.1| ras-related protein RHN1 [Zea mays]
gi|195613140|gb|ACG28400.1| ras-related protein RHN1 [Zea mays]
gi|195652993|gb|ACG45964.1| ras-related protein RHN1 [Zea mays]
gi|238006674|gb|ACR34372.1| unknown [Zea mays]
Length = 203
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 119/189 (62%), Gaps = 25/189 (13%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 37 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNP 96
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK W V+ELQ PN ++ALAGNK D+ +R V
Sbjct: 97 ASFTRAKKW---------------------VQELQAQGNPNTIVALAGNKVDMLDARH-V 134
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQGGRRLVETAEAP 245
E + YA+ENGL FMETSAKTA+NVN+IF EIAK+L + +E + Q G L + +
Sbjct: 135 AVEEAKTYAQENGLFFMETSAKTAINVNDIFYEIAKRLLQGQEAPSPQAGIVLNQRPDER 194
Query: 246 --KTSNCCN 252
TS+CC+
Sbjct: 195 MVSTSSCCS 203
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 46
>gi|319921858|gb|ADV78543.1| small GTP binding protein Rab5 [Oryza sativa Indica Group]
Length = 203
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 118/195 (60%), Gaps = 37/195 (18%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 37 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNA 96
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK W V+ELQ PN ++ALAGNKAD+ +R+ V
Sbjct: 97 ASFTRAKKW---------------------VQELQAQGNPNTIMALAGNKADMIEARQ-V 134
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL---------PKKEVNNGQGGRR 237
E YA+ENGL FMETSAKTA+NVN++F EIAK+L P V N + R
Sbjct: 135 PAEEARTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQNTPAGMVLNQRPAER 194
Query: 238 LVETAEAPKTSNCCN 252
+V +S+CC+
Sbjct: 195 MV------SSSSCCS 203
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGA 46
>gi|414874079|tpg|DAA52636.1| TPA: ras protein RHN1 [Zea mays]
Length = 248
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 119/189 (62%), Gaps = 25/189 (13%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 82 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNP 141
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK W V+ELQ PN ++ALAGNK D+ +R V
Sbjct: 142 ASFTRAKKW---------------------VQELQAQGNPNTIVALAGNKVDMLDARH-V 179
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQGGRRLVETAEAP 245
E + YA+ENGL FMETSAKTA+NVN+IF EIAK+L + +E + Q G L + +
Sbjct: 180 AVEEAKTYAQENGLFFMETSAKTAINVNDIFYEIAKRLLQGQEAPSPQAGIVLNQRPDER 239
Query: 246 --KTSNCCN 252
TS+CC+
Sbjct: 240 MVSTSSCCS 248
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 53 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 91
>gi|115454491|ref|NP_001050846.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|40538929|gb|AAR87186.1| putative small GTP-binding protein [Oryza sativa Japonica Group]
gi|108710277|gb|ABF98072.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113549317|dbj|BAF12760.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|215692370|dbj|BAG87790.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695240|dbj|BAG90431.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 121/195 (62%), Gaps = 37/195 (18%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 37 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNP 96
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ A N T V+ALAGNKADL +R+ V
Sbjct: 97 ASFTRAKKWVQELQ--AQGNSST-------------------VVALAGNKADLLETRQ-V 134
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-VNNGQGG--------RR 237
+ E + YA+ENGL FMETSAKTA NVN+IF EIAK+L + + N Q G R
Sbjct: 135 QIEEAKTYAQENGLFFMETSAKTATNVNDIFYEIAKRLLQGQPAQNPQAGMVLSQRPNER 194
Query: 238 LVETAEAPKTSNCCN 252
LV +A +CC+
Sbjct: 195 LVSSA------SCCS 203
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 46
>gi|356511351|ref|XP_003524390.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 199
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 109/176 (61%), Gaps = 22/176 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF T + L++ T++F+IWDTAGQERYH+LAPMYYR A AAI+VYDIT+ D+F RAK W
Sbjct: 45 AAFFTHVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+E+QR A ++ F L NKADL R+ V Y EGE YA
Sbjct: 105 VREVQRQANSSLTMF---------------------LVANKADLEDERK-VRYEEGEEYA 142
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
+ENGL F+ETSAKTA NVNE+F EIAK+L K + G + E + CC
Sbjct: 143 KENGLSFLETSAKTAQNVNELFYEIAKRLVKANPSRQSGMKLHTRPGETRRGFLCC 198
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 290 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+T+ K Q KLVLLG+ GK+SLVLRFV+G+F EYQESTIG
Sbjct: 3 RTRNKSLQAKLVLLGDMGAGKTSLVLRFVKGEFSEYQESTIGA 45
>gi|449298295|gb|EMC94310.1| hypothetical protein BAUCODRAFT_544119 [Baudoinia compniacensis
UAMH 10762]
Length = 227
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 118/190 (62%), Gaps = 35/190 (18%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LDD T++FEIWDTAGQERY +LAPMY
Sbjct: 38 FVKDQFDDYRESTIG---------AAFLTQTIALDDQTTVKFEIWDTAGQERYKSLAPMY 88
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AKSWVK ELQR A NI+I
Sbjct: 89 YRNANCAVVVYDITQAASLDKAKSWVK---------------------ELQRQANENIII 127
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL S+R +E ++ EAYA E GLLF ETSAKT+ NV E+F IAKKLP +
Sbjct: 128 ALAGNKLDLAESDPSKRAIEKADAEAYAREAGLLFFETSAKTSENVKELFTAIAKKLPIE 187
Query: 228 EVNNGQGGRR 237
+ + +GG R
Sbjct: 188 QASQ-RGGMR 196
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 283 RIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
R Q+ + + Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 4 RPQQGGRPSGTRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIG 52
>gi|13774086|gb|AAK38149.1| small GTP-binding protein [Oryza sativa]
Length = 203
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 118/195 (60%), Gaps = 37/195 (18%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH LAPMYYR A AAI+VYDITN
Sbjct: 37 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHGLAPMYYRGAAAAIVVYDITNA 96
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK W V+ELQ PN ++ALAGNKAD+ +R+ V
Sbjct: 97 ASFTRAKKW---------------------VQELQAQGNPNTIMALAGNKADMVEARQ-V 134
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL---------PKKEVNNGQGGRR 237
E + YA+ENGL FMETSAKTA+NVN++F EIAK+L P V N + R
Sbjct: 135 PAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTPAGMVLNQRPAER 194
Query: 238 LVETAEAPKTSNCCN 252
+V +S+CC+
Sbjct: 195 MV------SSSSCCS 203
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGA 46
>gi|194688230|gb|ACF78199.1| unknown [Zea mays]
gi|195637900|gb|ACG38418.1| ras-related protein RHN1 [Zea mays]
gi|413933484|gb|AFW68035.1| Ras protein RHN1 [Zea mays]
Length = 203
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 120/189 (63%), Gaps = 25/189 (13%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 37 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNP 96
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ N ++ALAGNKAD+ +R+ V
Sbjct: 97 ASFTRAK---------------------KWVQELQAQGNQNTIVALAGNKADMLDARQ-V 134
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQGGRRLVE--TAE 243
E +AYA+ENGL FMETSAKTA+NVN+IF EIAKKL + ++ + Q G L +
Sbjct: 135 PAEEAKAYAQENGLFFMETSAKTAINVNDIFYEIAKKLLQGQQAPSPQAGMVLNQRPNER 194
Query: 244 APKTSNCCN 252
+S+CC+
Sbjct: 195 TVSSSSCCS 203
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 46
>gi|325180967|emb|CCA15376.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 196
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 120/199 (60%), Gaps = 31/199 (15%)
Query: 59 CMTQIVINVVFYPY---LFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNA 114
C+ + FY + AAF+TQTV L D ++FEIWDTAGQERY +LAPMYYR A
Sbjct: 23 CLVVRFVRDEFYEFQEPTIGAAFLTQTVNLSDGCAVKFEIWDTAGQERYRSLAPMYYRGA 82
Query: 115 QAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAG 174
AAI+VYD+TN+D+F AKSWVKELQR R S N+VIALAG
Sbjct: 83 AAAIVVYDVTNKDSFTGAKSWVKELQR----------RGDS-----------NVVIALAG 121
Query: 175 NKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
NKADL T RR V E YAE+NG+L +ETSAKT+ NV +FV IA LP+ +N Q
Sbjct: 122 NKADLET-RRAVTLEEARQYAEDNGILHLETSAKTSANVKNLFVAIATNLPQ---SNTQS 177
Query: 235 GRRLVETAE--APKTSNCC 251
R A+ A K+ CC
Sbjct: 178 NRDTFPLAQPTASKSKGCC 196
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
T C +KLVLLG++AVGKS LV+RFVR +F+E+QE TIG
Sbjct: 2 TSNNTCHFKLVLLGDTAVGKSCLVVRFVRDEFYEFQEPTIGA 43
>gi|125580167|gb|EAZ21313.1| hypothetical protein OsJ_36965 [Oryza sativa Japonica Group]
gi|218187297|gb|EEC69724.1| hypothetical protein OsI_39224 [Oryza sativa Indica Group]
Length = 198
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 108/158 (68%), Gaps = 22/158 (13%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 37 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNA 96
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ A N PN ++ALAGNKAD+ +R+ V
Sbjct: 97 ASFTRAKKWVQELQ--AQGN-------------------PNTIMALAGNKADMVEARQ-V 134
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
E + YA+ENGL FMETSAKTA+NVN++F EIAK+L
Sbjct: 135 PAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRL 172
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGA 46
>gi|308807024|ref|XP_003080823.1| GTP binding protein (ISS) [Ostreococcus tauri]
gi|116059284|emb|CAL54991.1| GTP binding protein (ISS), partial [Ostreococcus tauri]
Length = 200
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 127/207 (61%), Gaps = 29/207 (14%)
Query: 51 IWLKDRVDCMTQIVINVV---FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D + +V+ V F+ Y AAF+TQTVC+DD TI+FEIWDTAGQERYH
Sbjct: 17 VLLGDMGAGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCVDDRTIKFEIWDTAGQERYH 76
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AAIIVYDI +Q +F RAKSWV+ELQ+ G A
Sbjct: 77 SLAPMYYRGAAAAIIVYDIQSQSSFARAKSWVRELQKQ--------GNA----------- 117
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
++V+ALAGNK D+ +R V+ E EAYA ENGL FMETSAK A+NV E+F EIA KL
Sbjct: 118 --SLVMALAGNKCDME-EKREVQAEEAEAYAAENGLFFMETSAKAAVNVTELFHEIAVKL 174
Query: 225 PKKEVNNGQGGRRLVETAEAPKTSNCC 251
P+ G L APK S CC
Sbjct: 175 PRAPAPTAP-GVVLTNQNRAPKNSQCC 200
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 36/54 (66%), Gaps = 6/54 (11%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE------CQSSHSISFSM 344
Q KLVLLG+ GKSSLVLRFV+GQFHEYQESTIG C +I F +
Sbjct: 13 QAKLVLLGDMGAGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCVDDRTIKFEI 66
>gi|242038603|ref|XP_002466696.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
gi|241920550|gb|EER93694.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
Length = 203
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 106/158 (67%), Gaps = 22/158 (13%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 37 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNP 96
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK W V+ELQ PN ++ALAGNKAD+ +R+ V
Sbjct: 97 ASFTRAKKW---------------------VQELQAQGNPNTIVALAGNKADMLDARQ-V 134
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
E + YA+ENGL FMETSAK+A+NVN+IF EIAK+L
Sbjct: 135 PAEEAKTYAQENGLFFMETSAKSAINVNDIFYEIAKRL 172
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 46
>gi|413933482|gb|AFW68033.1| hypothetical protein ZEAMMB73_435802 [Zea mays]
Length = 177
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 104/149 (69%), Gaps = 22/149 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN +F RAK
Sbjct: 20 AAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNPASFTRAK-- 77
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
WV+ELQ N ++ALAGNKAD+ +R+ V E +AYA
Sbjct: 78 -------------------KWVQELQAQGNQNTIVALAGNKADMLDARQ-VPAEEAKAYA 117
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKL 224
+ENGL FMETSAKTA+NVN+IF EIAKKL
Sbjct: 118 QENGLFFMETSAKTAINVNDIFYEIAKKL 146
>gi|213403714|ref|XP_002172629.1| GTP-binding protein ypt5 [Schizosaccharomyces japonicus yFS275]
gi|212000676|gb|EEB06336.1| GTP-binding protein ypt5 [Schizosaccharomyces japonicus yFS275]
Length = 217
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 113/189 (59%), Gaps = 27/189 (14%)
Query: 69 FYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQD 127
F AAF+TQT+ + D++ +++EIWDTAGQERY +LAPMYYRNA AI+VYDIT
Sbjct: 48 FRESTIGAAFLTQTLPINDELAVKYEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQ-- 105
Query: 128 TFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVE 187
+ +AKSW+KELQR AP IVIALAGNK DL RR VE
Sbjct: 106 -------------------AASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVE 146
Query: 188 YSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-----VNNGQGGRRLVETA 242
S+ E+YA E GLLF ETSAKTA NV E+F IA KLP +E N G L +
Sbjct: 147 KSDAESYANEMGLLFFETSAKTAENVTELFTAIANKLPLQEQLTQAKNASPRGVNLSQAR 206
Query: 243 EAPKTSNCC 251
A +T+ C
Sbjct: 207 NATQTNGAC 215
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 8/37 (21%)
Query: 304 GESAVGK--------SSLVLRFVRGQFHEYQESTIGG 332
G+SAVGK SSLVLRFV+ QF +++ESTIG
Sbjct: 19 GDSAVGKVCLTGAVDSSLVLRFVKDQFDDFRESTIGA 55
>gi|226291514|gb|EEH46942.1| GTP-binding protein ypt5 [Paracoccidioides brasiliensis Pb18]
Length = 217
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 114/185 (61%), Gaps = 31/185 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL +R ++ ++
Sbjct: 112 WVK---------------------ELQRQANENIIIALAGNKLDLVMDSPDKRAIQTADA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV------NNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAK+A NV E+F IAKKLP + +N + G L A P
Sbjct: 151 EAYAREAGLLFFETSAKSATNVRELFTAIAKKLPLDQAGPRNLRSNPRPGVDLRPEAAGP 210
Query: 246 KTSNC 250
+ +NC
Sbjct: 211 QANNC 215
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 52
>gi|224070895|ref|XP_002303285.1| predicted protein [Populus trichocarpa]
gi|222840717|gb|EEE78264.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 111/177 (62%), Gaps = 22/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF TQ + L + T++F+IWDTAGQERYH+LAPMYYR A AA+IVYDI++ DTF RAK W
Sbjct: 45 AAFFTQILSLTEATVKFDIWDTAGQERYHSLAPMYYRGAAAAVIVYDISSMDTFVRAKRW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+ELQR P +V+AL NK DL S+R V+ +GE ++
Sbjct: 105 ---------------------VQELQRQGNPKMVMALVANKLDLD-SKREVQNEDGEQFS 142
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCCN 252
+ENG+ FMETSAKTA N+NE+F EIAK+L K + G ET + CC+
Sbjct: 143 QENGMFFMETSAKTAQNINELFYEIAKRLAKAYPSKSTGVNLNDETESRTRNLFCCS 199
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI Q KLVLLG+ GK+SLVLRFV+GQF ++QE TIG
Sbjct: 7 KIIQAKLVLLGDMGTGKTSLVLRFVKGQFFDHQEPTIGA 45
>gi|367018094|ref|XP_003658332.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
gi|347005599|gb|AEO53087.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
Length = 219
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 113/182 (62%), Gaps = 34/182 (18%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 38 FVKDQFDSYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 88
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AKSWVK ELQR A NI+I
Sbjct: 89 YRNANCAVVVYDITQATSLDKAKSWVK---------------------ELQRQANENIII 127
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL T +R +E ++ EAYA E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 128 ALAGNKLDLVTEQPDKRAIETADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKLPLD 187
Query: 228 EV 229
+V
Sbjct: 188 QV 189
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 15 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 53
>gi|256078263|ref|XP_002575416.1| rab5 [Schistosoma mansoni]
gi|353230409|emb|CCD76580.1| putative rab5 [Schistosoma mansoni]
Length = 198
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 116/179 (64%), Gaps = 25/179 (13%)
Query: 76 AAFITQTVCLDD--VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AA++TQT+ L+D T++FEIWDTAGQERYH+LAPMYYR AQAA++VYDITNQ++F RAK
Sbjct: 41 AAYLTQTIVLNDPPATVKFEIWDTAGQERYHSLAPMYYRGAQAAVVVYDITNQNSFERAK 100
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
SW+ ELQ A +T G VIALAGNK DL +R V + E +
Sbjct: 101 SWINELQEKA----NTSG-----------------VIALAGNKVDL-EGQRAVSFEEAQE 138
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKK-LPKKEVNNGQGGRRLVETAEAPKTSNCC 251
YA++N LLFMETSAK + NV+E+F IA++ L E + GG++L + CC
Sbjct: 139 YADKNRLLFMETSAKISTNVSELFTAIARELLSHAEPSRPSGGQQLTPNDSPTQQRQCC 197
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+KLV+LGESAVGKSS+VLR V+ QF EYQE+TIG
Sbjct: 7 HKLVILGESAVGKSSIVLRLVKCQFSEYQEATIGA 41
>gi|154275612|ref|XP_001538657.1| GTP-binding protein ypt5 [Ajellomyces capsulatus NAm1]
gi|150415097|gb|EDN10459.1| GTP-binding protein ypt5 [Ajellomyces capsulatus NAm1]
Length = 181
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 115/185 (62%), Gaps = 31/185 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 16 AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 75
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R ++ ++
Sbjct: 76 WVK---------------------ELQRQANENIVIALAGNKLDLVTDSPDKRAIQTADA 114
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV------NNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAKT+ NV E+F IAKKLP + +N + G L A P
Sbjct: 115 EAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLRSNPRPGVDLRPEAAGP 174
Query: 246 KTSNC 250
+ ++C
Sbjct: 175 QANSC 179
>gi|4741844|gb|AAD28731.1|AF112964_1 small GTP-binding protein [Triticum aestivum]
Length = 209
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 120/190 (63%), Gaps = 25/190 (13%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 42 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNA 101
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ A N PN V+ALAGNKAD+ +R+ V
Sbjct: 102 ASFTRAKKWVQELQ--AQGN-------------------PNTVMALAGNKADMLEARQ-V 139
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKK-LPKKEVNNGQGGRRLVE--TAE 243
E YA+ NGL F+ETSAKTA+NVN++F E+AK+ L ++ N Q G L +
Sbjct: 140 PVEEATTYAQGNGLFFIETSAKTAINVNDVFYELAKRLLAGQQAQNPQAGMVLSQRPAER 199
Query: 244 APKTSNCCNT 253
+++CC++
Sbjct: 200 MVSSTSCCSS 209
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 SKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGA 51
>gi|56756264|gb|AAW26307.1| SJCHGC09085 protein [Schistosoma japonicum]
Length = 199
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 113/179 (63%), Gaps = 25/179 (13%)
Query: 76 AAFITQTVCLDD--VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+T V L+D T++ EIWDTAGQERYH+LAPMYYR AQAA++VYD+TN+D+F RAK
Sbjct: 42 AAFMTHMVVLEDPPTTVKLEIWDTAGQERYHSLAPMYYRGAQAAVVVYDVTNKDSFVRAK 101
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
SWV EL + A AK VIALAGNK DL ++R V + E +
Sbjct: 102 SWVNELNKNA-------NTAK--------------VIALAGNKVDL-EAQRVVSHEEAQE 139
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK-EVNNGQGGRRLVETAEAPKTSNCC 251
YA +NGLLFMETSAKTA NV E+F IA++LP E G ++L + + CC
Sbjct: 140 YANQNGLLFMETSAKTATNVPELFTAIAQRLPHDIEPPRSSGAQQLTQNDSPAQQRQCC 198
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 296 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRL 350
CQ+KLV+LGESAVGKSS+V+R + QF EYQE+TIG + + PT +L
Sbjct: 6 CQFKLVILGESAVGKSSIVIRLCKSQFSEYQEATIGAAFMTHMVVLEDPPTTVKL 60
>gi|406864129|gb|EKD17175.1| Rab5-like protein ypt5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 220
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 121/204 (59%), Gaps = 38/204 (18%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LDD T++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDDFRESTI---------GAAFLTQTISLDDNTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK WVK ELQR A NI+I
Sbjct: 90 YRNANCAVVVYDITQASSLDKAKQWVK---------------------ELQRQANENIII 128
Query: 171 ALAGNKADLPTS---RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL T+ +R + ++ EAYA+E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 129 ALAGNKLDLVTAQPDKRAITTADAEAYAKEAGLLFFETSAKTSENVRELFTSIAKKLPLD 188
Query: 228 EV---NNGQGGRRLVE-TAEAPKT 247
+ N GGR VE E P T
Sbjct: 189 QAGPRNPRSGGRGGVELRPENPST 212
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 34/38 (89%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+ Q+KLVLLGESAVGKSSLVLRFV+ QF +++ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSLVLRFVKDQFDDFRESTIG 53
>gi|425765692|gb|EKV04360.1| RAB GTPase Ypt5, putative [Penicillium digitatum Pd1]
gi|425779183|gb|EKV17266.1| RAB GTPase Ypt5, putative [Penicillium digitatum PHI26]
Length = 242
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 113/189 (59%), Gaps = 37/189 (19%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LDD T ++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 72 AAFLTQTISLDDTTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 131
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R ++ ++
Sbjct: 132 WVK---------------------ELQRQANENIVIALAGNKLDLVTESPDKRAIQEADA 170
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVET--------AE 243
EAYA E GLLF ETSAK++ NV E+F IAKKLP + G R L T E
Sbjct: 171 EAYAREAGLLFFETSAKSSTNVKELFTAIAKKLPLDQA----GSRNLRATPRPGVDLRPE 226
Query: 244 APKTSNCCN 252
AP T +
Sbjct: 227 APGTQGAAS 235
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 20/60 (33%)
Query: 293 AKICQYKLVLLGESAVGK--------------------SSLVLRFVRGQFHEYQESTIGG 332
A+ Q+KLVLLGESAVGK SSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKVWDTTCDLLLSAADLTAIFQSSLVLRFVKDQFDDYRESTIGA 72
>gi|225556792|gb|EEH05080.1| GTP-binding protein ypt5 [Ajellomyces capsulatus G186AR]
gi|240281654|gb|EER45157.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325087805|gb|EGC41115.1| GTP-binding protein ypt5 [Ajellomyces capsulatus H88]
Length = 217
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 114/185 (61%), Gaps = 31/185 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R ++ +
Sbjct: 112 WVK---------------------ELQRQANENIVIALAGNKLDLVTDSPDKRAIQTVDA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV------NNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAKT+ NV E+F IAKKLP + +N + G L A P
Sbjct: 151 EAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLRSNPRPGVDLRPEAAGP 210
Query: 246 KTSNC 250
+ ++C
Sbjct: 211 QANSC 215
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 52
>gi|440470816|gb|ELQ39867.1| mitochondrion protein [Magnaporthe oryzae Y34]
gi|440482453|gb|ELQ62942.1| mitochondrion protein [Magnaporthe oryzae P131]
Length = 932
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 128/227 (56%), Gaps = 40/227 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 45 AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKA 104
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL T +R V SE
Sbjct: 105 WVK---------------------ELQRQANENIIIALAGNKLDLVTEQPDKRAVPTSEA 143
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP-----KKEVNNGQGGRRLVETAEAP- 245
EAYA E GLLF ETSAKTA NV ++F IAKKLP + G+G + E
Sbjct: 144 EAYAREAGLLFFETSAKTAENVRDLFTAIAKKLPLDQAGPRHARPGRGAGVSLNPPEGAN 203
Query: 246 -KTSNCCNT-----QF---VQCKYKSSIHILTMANSNNSNSNGRGGR 283
+T+ CNT QF + + + + + + + + G GGR
Sbjct: 204 TQTNGSCNTVADLVQFFSTISLSFAAGRELPRIFRAQHPSVRGPGGR 250
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 9/39 (23%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGK QF Y+ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKD---------QFDSYRESTIGA 45
>gi|115397973|ref|XP_001214578.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
gi|114192769|gb|EAU34469.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
Length = 218
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 109/174 (62%), Gaps = 30/174 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LDD T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDDSTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R + ++
Sbjct: 112 WVK---------------------ELQRQANENIVIALAGNKLDLVTENPDKRAISTADA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAK++ NV+E+F IAKKLP Q G R + T P
Sbjct: 151 EAYAREAGLLFFETSAKSSTNVHELFTAIAKKLPLD-----QAGPRNMRTTPRP 199
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKNQFDDYRESTIGA 52
>gi|297738167|emb|CBI27368.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/152 (54%), Positives = 100/152 (65%), Gaps = 22/152 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDIT+ ++
Sbjct: 38 FQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTES 97
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK WV +ELQ+ PN+V+ALAGNKADL R+ V
Sbjct: 98 FARAKKWV---------------------QELQKQGNPNMVMALAGNKADLEDKRK-VTA 135
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEI 220
E YAEENGL F ETSAKTA+NVN+ F EI
Sbjct: 136 EEARVYAEENGLFFTETSAKTAVNVNDTFYEI 167
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 45
>gi|261205984|ref|XP_002627729.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|239592788|gb|EEQ75369.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|327350703|gb|EGE79560.1| Ypt5 protein [Ajellomyces dermatitidis ATCC 18188]
Length = 217
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 114/185 (61%), Gaps = 31/185 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R ++ ++
Sbjct: 112 WVK---------------------ELQRQANENIVIALAGNKLDLVTDSPDKRAIQTADA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV------NNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAK++ NV E+F IAKKLP + +N + G L A P
Sbjct: 151 EAYAREAGLLFFETSAKSSTNVRELFTAIAKKLPLDQAGPRNLRSNPRPGVDLRPEAAGP 210
Query: 246 KTSNC 250
+ + C
Sbjct: 211 QANGC 215
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 52
>gi|296491534|tpg|DAA33577.1| TPA: ras-related protein Rab-5A [Bos taurus]
Length = 160
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 97/135 (71%), Gaps = 22/135 (16%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++
Sbjct: 48 FQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEES 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIAL+GNKADL ++R V++
Sbjct: 108 FARAKNWVKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDF 145
Query: 189 SEGEAYAEENGLLFM 203
E ++YA++N LLFM
Sbjct: 146 QEAQSYADDNSLLFM 160
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 47/64 (73%), Gaps = 9/64 (14%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
MAN + NG PN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QES
Sbjct: 1 MANRGATRPNG-------PN--TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQES 51
Query: 329 TIGG 332
TIG
Sbjct: 52 TIGA 55
>gi|255936341|ref|XP_002559197.1| Pc13g07680 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583817|emb|CAP91837.1| Pc13g07680 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 220
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 103/154 (66%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LDD T ++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 54 AAFLTQTISLDDTTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 113
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R ++ ++
Sbjct: 114 WVK---------------------ELQRQANENIVIALAGNKLDLVTESPDKRAIQEADA 152
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
EAYA E GLLF ETSAK++ NV E+F IAKKLP
Sbjct: 153 EAYAREAGLLFFETSAKSSTNVKELFTAIAKKLP 186
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 293 AKICQYKLVLLGE--SAVGKSSLVLRFVRGQFHEYQESTIGG 332
A+ Q+KLVLL +A+ +SSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLATDLTAIFQSSLVLRFVKDQFDDYRESTIGA 54
>gi|258578121|ref|XP_002543242.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
gi|237903508|gb|EEP77909.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
Length = 217
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 114/190 (60%), Gaps = 33/190 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL T +R V+ ++
Sbjct: 112 WVK---------------------ELQRQANENIIIALAGNKLDLVTDSPDKRAVQAADA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTS--- 248
EAYA E GLLF ETSAKT+ NV E+F IAKKLP Q G R + ++ P
Sbjct: 151 EAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLD-----QAGPRNLRSSARPGVDLRP 205
Query: 249 NCCNTQFVQC 258
NTQ C
Sbjct: 206 ESTNTQAGGC 215
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 52
>gi|121706988|ref|XP_001271697.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
gi|119399845|gb|EAW10271.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
Length = 218
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 109/174 (62%), Gaps = 30/174 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R ++ ++
Sbjct: 112 WVK---------------------ELQRQANENIVIALAGNKLDLVTENPDKRAIQTADA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAKT+ NV E+F IAKKLP Q G R + T P
Sbjct: 151 EAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLD-----QAGPRNLRTTPRP 199
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 52
>gi|239611052|gb|EEQ88039.1| ypt5 protein [Ajellomyces dermatitidis ER-3]
Length = 208
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 114/185 (61%), Gaps = 31/185 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 43 AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 102
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R ++ ++
Sbjct: 103 WVK---------------------ELQRQANENIVIALAGNKLDLVTDSPDKRAIQTADA 141
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV------NNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAK++ NV E+F IAKKLP + +N + G L A P
Sbjct: 142 EAYAREAGLLFFETSAKSSTNVRELFTAIAKKLPLDQAGPRNLRSNPRPGVDLRPEAAGP 201
Query: 246 KTSNC 250
+ + C
Sbjct: 202 QANGC 206
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 9/40 (22%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
A+ Q+KLVLLGESAVGK QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKD---------QFDDYRESTIGA 43
>gi|67526769|ref|XP_661446.1| hypothetical protein AN3842.2 [Aspergillus nidulans FGSC A4]
gi|40739917|gb|EAA59107.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259481595|tpe|CBF75261.1| TPA: RAB GTPase Ypt5, putative (AFU_orthologue; AFUA_4G08040)
[Aspergillus nidulans FGSC A4]
Length = 218
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 109/174 (62%), Gaps = 30/174 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R + ++
Sbjct: 112 WVK---------------------ELQRQANENIVIALAGNKLDLVTENPDKRAIPTADA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAKT+ NV E+F IAKKLP Q G R + TA P
Sbjct: 151 EAYAREAGLLFFETSAKTSSNVRELFTAIAKKLPLD-----QAGPRNMRTAPRP 199
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 52
>gi|402083928|gb|EJT78946.1| GTP-binding protein ypt5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 221
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 121/211 (57%), Gaps = 43/211 (20%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 90 YRNANCAVVVYDITQSASLDKAKAWVK---------------------ELQRQANENIII 128
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL T +R V ++ EAYA E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 129 ALAGNKLDLVTEQPDKRAVSTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLD 188
Query: 228 EVNNGQGGRRLVETAEAP----KTSNCCNTQ 254
+V G R + P +S NTQ
Sbjct: 189 QV-----GPRHARPGQRPGVNLTSSEGANTQ 214
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 10/64 (15%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
MA+ + G GG + Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ES
Sbjct: 1 MASRGPPGARGMGGN----------RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRES 50
Query: 329 TIGG 332
TIG
Sbjct: 51 TIGA 54
>gi|452988143|gb|EME87898.1| hypothetical protein MYCFIDRAFT_70384 [Pseudocercospora fijiensis
CIRAD86]
Length = 222
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 108/169 (63%), Gaps = 29/169 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 51 AAFLTQTIALDEQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLEKAKA 110
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNKADL +R V ++
Sbjct: 111 WVK---------------------ELQRQANENIIIALAGNKADLVAEQPDKRAVSTADA 149
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN----GQGGR 236
EAYA+E GLLF ETSAKTA NV E+F IAKKLP ++ G GR
Sbjct: 150 EAYAKEAGLLFFETSAKTAENVKELFTAIAKKLPIEQATQRGMRGAAGR 198
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 12 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 51
>gi|367051801|ref|XP_003656279.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
gi|347003544|gb|AEO69943.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
Length = 219
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 112/182 (61%), Gaps = 34/182 (18%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 38 FVKDQFDSYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 88
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AKSWVK ELQR A NI+I
Sbjct: 89 YRNANCAVVVYDITQATSLDKAKSWVK---------------------ELQRQANENIII 127
Query: 171 ALAGNKADL---PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL +R V+ ++ EAYA E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 128 ALAGNKLDLVAEQPDKRAVQTADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKLPLD 187
Query: 228 EV 229
+V
Sbjct: 188 QV 189
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 15 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 53
>gi|322712113|gb|EFZ03686.1| Rab5-like protein ypt5 [Metarhizium anisopliae ARSEF 23]
Length = 220
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 118/201 (58%), Gaps = 39/201 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSFRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A+IVYDIT + +AK+WVKELQR A KE +I+I
Sbjct: 90 YRNANCAVIVYDITQSSSLDKAKAWVKELQRQA--------------KE-------DIII 128
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL T +R + ++ EAYA E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 129 ALAGNKLDLVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLD 188
Query: 228 EVNNGQGGRRLVETAEAPKTS 248
Q G R + P S
Sbjct: 189 -----QAGPRHTRPGQRPGVS 204
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF ++ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGA 54
>gi|384493256|gb|EIE83747.1| ras protein [Rhizopus delemar RA 99-880]
Length = 208
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 103/151 (68%), Gaps = 23/151 (15%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+ QT+ LDD T++FEIWDTAGQERY +LAPMYYRNA A+IVYDIT + +AK+
Sbjct: 46 AAFLAQTISLDDNTTVKFEIWDTAGQERYKSLAPMYYRNANCAVIVYDITQASSLDKAKA 105
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WV ELQ R A PNIVIALAGNK+DL +RR +E + Y
Sbjct: 106 WVNELQ---------------------RQADPNIVIALAGNKSDLG-ARRAIETKVAQEY 143
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
A+E GLLF ETSAKTA NV+++F+ IAK++P
Sbjct: 144 ADEAGLLFFETSAKTAENVHDLFLAIAKRMP 174
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 35/42 (83%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
TQ K Q+KLVLLGESAVGKSSLV+RFV+ F EY+ESTIG
Sbjct: 5 TQGKTYQFKLVLLGESAVGKSSLVMRFVKDHFDEYRESTIGA 46
>gi|346972267|gb|EGY15719.1| GTP-binding protein ypt5 [Verticillium dahliae VdLs.17]
Length = 243
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 113/182 (62%), Gaps = 34/182 (18%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 62 FVKDQFDSYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 112
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 113 YRNANCAVVVYDITQSSSLDKAKAWVK---------------------ELQRQANENIII 151
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL T +R V ++ EAYA+E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 152 ALAGNKLDLVTEQPDKRAVSTADAEAYAKEAGLLFFETSAKTAENVRELFTAIAKKLPLD 211
Query: 228 EV 229
+V
Sbjct: 212 QV 213
>gi|358387599|gb|EHK25193.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 220
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 123/204 (60%), Gaps = 37/204 (18%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSFRESTI---------GAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 90 YRNANCAVVVYDITQSASLDKAKAWVK---------------------ELQRQANENIII 128
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL T +R + ++ EAYA E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 129 ALAGNKLDLVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLD 188
Query: 228 EVN--NGQGGRRLVETAEAPKTSN 249
+V + + G+R + AP+ SN
Sbjct: 189 QVGPRHARPGQR-PGVSLAPENSN 211
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF ++ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGA 54
>gi|389632835|ref|XP_003714070.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
gi|351646403|gb|EHA54263.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
Length = 221
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 110/178 (61%), Gaps = 34/178 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSYRESTI---------GAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 90 YRNANCAVVVYDITQSASLDKAKAWVK---------------------ELQRQANENIII 128
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
ALAGNK DL T +R V SE EAYA E GLLF ETSAKTA NV ++F IAKKLP
Sbjct: 129 ALAGNKLDLVTEQPDKRAVPTSEAEAYAREAGLLFFETSAKTAENVRDLFTAIAKKLP 186
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 54
>gi|119180268|ref|XP_001241623.1| ras-related protein [Coccidioides immitis RS]
gi|303321211|ref|XP_003070600.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240110296|gb|EER28455.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320035923|gb|EFW17863.1| GTP-binding protein ypt5 [Coccidioides posadasii str. Silveira]
gi|392866497|gb|EJB11129.1| GTP-binding protein ypt5 [Coccidioides immitis RS]
Length = 217
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 103/154 (66%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL T +R V+ ++
Sbjct: 112 WVK---------------------ELQRQANENIIIALAGNKLDLVTDSPDKRAVQTADA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
EAYA E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 151 EAYAREAGLLFFETSAKTSTNVRELFTAIAKKLP 184
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 52
>gi|384483295|gb|EIE75475.1| hypothetical protein RO3G_00179 [Rhizopus delemar RA 99-880]
Length = 206
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 114/184 (61%), Gaps = 31/184 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+ QT+ LDD T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 44 AAFLAQTISLDDNTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKA 103
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WV ELQ R A PNIVIALAGNK+DL +RR +E + Y
Sbjct: 104 WVNELQ---------------------RQADPNIVIALAGNKSDLG-ARRAIETKVAQEY 141
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP-------KKEVNNGQGGRRLVETAEAPKT 247
A+E GLLF ETSAKTA NV+++F+ IAK++P ++ NG R V+ +
Sbjct: 142 ADEAGLLFFETSAKTAENVHDLFLAIAKRMPLDQLADSSRKTRNGLNSRG-VDLENSGNN 200
Query: 248 SNCC 251
+N C
Sbjct: 201 ANSC 204
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 34/41 (82%)
Query: 292 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q K Q+KLVLLGESAVGKSSLV+RFV+ F EY+ESTIG
Sbjct: 4 QGKTYQFKLVLLGESAVGKSSLVMRFVKDHFDEYRESTIGA 44
>gi|302409676|ref|XP_003002672.1| GTP-binding protein ypt5 [Verticillium albo-atrum VaMs.102]
gi|261358705|gb|EEY21133.1| GTP-binding protein ypt5 [Verticillium albo-atrum VaMs.102]
Length = 241
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 113/182 (62%), Gaps = 34/182 (18%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 60 FVKDQFDSYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 110
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 111 YRNANCAVVVYDITQSSSLDKAKAWVK---------------------ELQRQANENIII 149
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL T +R V ++ EAYA+E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 150 ALAGNKLDLVTEQPDKRAVSTADAEAYAKEAGLLFFETSAKTAENVRELFTAIAKKLPLD 209
Query: 228 EV 229
+V
Sbjct: 210 QV 211
>gi|340517201|gb|EGR47446.1| rab5-like GTPase [Trichoderma reesei QM6a]
Length = 220
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 123/204 (60%), Gaps = 37/204 (18%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSFRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 90 YRNANCAVVVYDITQSASLDKAKAWVK---------------------ELQRQANENIII 128
Query: 171 ALAGNKADL---PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL +R + ++ EAYA E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 129 ALAGNKLDLVNEQPDKRAISTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLD 188
Query: 228 EVN--NGQGGRRLVETAEAPKTSN 249
+V + + G+R + AP++SN
Sbjct: 189 QVGPRHARPGQR-PGVSLAPESSN 211
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 286 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RP T + Q+KLVLLGESAVGKSS+VLRFV+ QF ++ESTIG
Sbjct: 10 RPGLNT--RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGA 54
>gi|145257106|ref|XP_001401615.1| GTP-binding protein ypt5 [Aspergillus niger CBS 513.88]
gi|134058525|emb|CAL00734.1| unnamed protein product [Aspergillus niger]
gi|350632151|gb|EHA20519.1| hypothetical protein ASPNIDRAFT_54582 [Aspergillus niger ATCC 1015]
Length = 218
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 108/174 (62%), Gaps = 30/174 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R + ++
Sbjct: 112 WVK---------------------ELQRQANENIVIALAGNKLDLVTESPDKRAIPTADA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAKT+ NV E+F IAKKLP Q G R + T P
Sbjct: 151 EAYAREAGLLFFETSAKTSSNVKELFTAIAKKLPLD-----QAGPRNLRTTPRP 199
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 52
>gi|145349469|ref|XP_001419155.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579386|gb|ABO97448.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 200
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/207 (49%), Positives = 120/207 (57%), Gaps = 28/207 (13%)
Query: 51 IWLKDRVDCMTQIVINVV---FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D + +V+ V F+ Y AAF+TQTVC DD TI+FEIWDTAGQERYH
Sbjct: 16 VLLGDMGAGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCADDRTIKFEIWDTAGQERYH 75
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AAIIVYDI +Q +F RAKSWV+ELQ+ G A
Sbjct: 76 SLAPMYYRGAAAAIIVYDIQSQSSFARAKSWVRELQKQ--------GNAA---------- 117
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
+V+ALAGNK D+ R EAYA ENGL FMETSAK A+NV E+F EIA KL
Sbjct: 118 ---LVMALAGNKCDMEEKREVEREEA-EAYASENGLFFMETSAKEALNVTELFHEIAVKL 173
Query: 225 PKKEVNNGQGGRRLVETAEAPKTSNCC 251
PK G L P+ S CC
Sbjct: 174 PKAPTPTNGPGVVLTNQNRTPQKSQCC 200
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Query: 288 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE------CQSSHSIS 341
+D A I Q KLVLLG+ GKSSLVLRFV+GQFHEYQESTIG C +I
Sbjct: 3 SDGRGAAITQAKLVLLGDMGAGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCADDRTIK 62
Query: 342 FSM 344
F +
Sbjct: 63 FEI 65
>gi|356527789|ref|XP_003532489.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 199
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 110/176 (62%), Gaps = 22/176 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF TQ + L++ T++F+IWDTAGQERYH+LAPMYYR A AAI+VYDIT+ D+F RAK W
Sbjct: 45 AAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+E+ R G ++ V+ L NKADL R+ V Y EGE YA
Sbjct: 105 VREVLRQ--------GNCQN-------------VMFLVANKADLEAERK-VRYEEGEEYA 142
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
+ENGL F+ETSAKTA NVNE+F EIAK+L K + G + E + CC
Sbjct: 143 KENGLSFLETSAKTAQNVNELFYEIAKRLAKANPSRQSGMKLHNRAGETRRGFFCC 198
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 290 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+T K Q KLVLLG+ GK+SLVLRFV+G+F EYQ+STIG
Sbjct: 3 RTGNKSLQAKLVLLGDMGAGKTSLVLRFVKGEFSEYQDSTIGA 45
>gi|328766761|gb|EGF76814.1| hypothetical protein BATDEDRAFT_37534 [Batrachochytrium
dendrobatidis JAM81]
Length = 245
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 101/161 (62%), Gaps = 21/161 (13%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ LDD I+FEIWDTAGQER+H+LAPMYYRNAQAA++ YDIT + +AK
Sbjct: 69 IGAAFLTQKCRLDDKIIKFEIWDTAGQERFHSLAPMYYRNAQAAVVAYDITKPASLEKAK 128
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
+WVKEL QR A PNIVIAL GNK DL + R V E A
Sbjct: 129 AWVKEL---------------------QRQANPNIVIALVGNKLDLAATARGVSTEEARA 167
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
YA E GLLF+E SAKT V +IF +IAKK+P + + +G
Sbjct: 168 YATEGGLLFLEASAKTGEFVMDIFTDIAKKIPLETLAAARG 208
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 33/45 (73%)
Query: 288 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
N Q+ K Q KLVLLGE+AVGKSSLVLRFV +F E +E TIG
Sbjct: 27 NAQSNLKPIQVKLVLLGEAAVGKSSLVLRFVNNEFQENKEPTIGA 71
>gi|378725883|gb|EHY52342.1| GTP-binding protein ypt5 [Exophiala dermatitidis NIH/UT8656]
Length = 219
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 111/178 (62%), Gaps = 34/178 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 38 FVKDQFDDYRESTI---------GAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 88
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AKSWVK ELQR A NIVI
Sbjct: 89 YRNANCAVVVYDITQASSLDKAKSWVK---------------------ELQRQANENIVI 127
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
ALAGNK DL +R ++ ++ EAYA+E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 128 ALAGNKLDLVNEHPDKRAIQTADAEAYAKEAGLLFFETSAKTATNVRELFTAIAKKLP 185
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 11/64 (17%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
MA + G GGR Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ES
Sbjct: 1 MATRAPAGRPGAGGRF-----------AQFKLVLLGESAVGKSSLVLRFVKDQFDDYRES 49
Query: 329 TIGG 332
TIG
Sbjct: 50 TIGA 53
>gi|83769133|dbj|BAE59270.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 227
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 112/186 (60%), Gaps = 31/186 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 61 AAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 120
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R + ++
Sbjct: 121 WVK---------------------ELQRQANENIVIALAGNKLDLVTENPDKRAIPTADA 159
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV------NNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAKT+ NV E+F IAKKLP + N + G L A
Sbjct: 160 EAYAREAGLLFFETSAKTSSNVRELFTAIAKKLPLDQAGPRNLRTNPRPGVDLRPEAPGT 219
Query: 246 KTSNCC 251
+ +N C
Sbjct: 220 QGANSC 225
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 9/47 (19%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFV---------RGQFHEYQESTIGG 332
Q+KLVLLGESAVGK SL L + R QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKVSLSLLVILTVADVFHYRDQFDDYRESTIGA 61
>gi|70994486|ref|XP_752022.1| RAB GTPase Ypt5 [Aspergillus fumigatus Af293]
gi|119500926|ref|XP_001267220.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|66849656|gb|EAL89984.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus Af293]
gi|119415385|gb|EAW25323.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|159125065|gb|EDP50182.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus A1163]
Length = 218
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 108/174 (62%), Gaps = 30/174 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R + ++
Sbjct: 112 WVK---------------------ELQRQANENIVIALAGNKLDLVTEHPDKRAIPTADA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAKT+ NV E+F IAKKLP Q G R + T P
Sbjct: 151 EAYAREAGLLFFETSAKTSTNVKELFAAIAKKLPLD-----QAGPRNLRTTPRP 199
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 52
>gi|238491614|ref|XP_002377044.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|317146075|ref|XP_001821272.2| GTP-binding protein ypt5 [Aspergillus oryzae RIB40]
gi|220697457|gb|EED53798.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|391869236|gb|EIT78438.1| GTPase Rab5/YPT51 [Aspergillus oryzae 3.042]
Length = 218
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 112/186 (60%), Gaps = 31/186 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R + ++
Sbjct: 112 WVK---------------------ELQRQANENIVIALAGNKLDLVTENPDKRAIPTADA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV------NNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAKT+ NV E+F IAKKLP + N + G L A
Sbjct: 151 EAYAREAGLLFFETSAKTSSNVRELFTAIAKKLPLDQAGPRNLRTNPRPGVDLRPEAPGT 210
Query: 246 KTSNCC 251
+ +N C
Sbjct: 211 QGANSC 216
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 52
>gi|395743828|ref|XP_003777995.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5A-like
[Pongo abelii]
Length = 203
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 113/170 (66%), Gaps = 27/170 (15%)
Query: 88 VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNI 147
VT++FEIWDTAGQE Y +LAPMYYR AQAAI+VYDITN+++F RA + VK
Sbjct: 55 VTLKFEIWDTAGQEXYRSLAPMYYRGAQAAIVVYDITNEESFARATNXVK---------- 104
Query: 148 DTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSA 207
ELQR A P IV+AL+GNKADL +++ V++ E ++YA++N L FM+TSA
Sbjct: 105 -----------ELQRQACPGIVVALSGNKADL-ANKKAVDFXEAQSYADDNSLSFMKTSA 152
Query: 208 KTAMNVNEIFVEIAKKLPKKEVNNGQGG---RRLVETAEA--PKTSNCCN 252
KT++NVNE+F+ IAKKLPK E N + RR V E P S CC+
Sbjct: 153 KTSVNVNEMFMAIAKKLPKNEPQNPEADSARRRGVALTEPTQPNRSQCCS 202
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 40/45 (88%), Gaps = 2/45 (4%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
PN T KICQ+KLVLLGESAVGKSSLVLR V+GQFHE++ESTIG
Sbjct: 12 PN--TGNKICQFKLVLLGESAVGKSSLVLRSVKGQFHEFRESTIG 54
>gi|359482942|ref|XP_002284702.2| PREDICTED: ras-related protein RHN1-like [Vitis vinifera]
gi|297743285|emb|CBI36152.3| unnamed protein product [Vitis vinifera]
Length = 199
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 113/177 (63%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF TQ + L++ T++F+IWDTAGQERYH+LAPMYYR A AA++VYDI+N DTF RAK W
Sbjct: 45 AAFFTQLLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISNVDTFVRAKKW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+ELQ+ N+V+AL NK DL S+R V EGE +
Sbjct: 105 ---------------------VQELQKQGNKNLVMALVANKCDLE-SKREVNTQEGEKLS 142
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCCN 252
EENG+ F+ETSAKT++N+NE+F EIAK+L + + G L ET + + CC+
Sbjct: 143 EENGMFFIETSAKTSLNINELFYEIAKRLAIAQPSQ-PSGMNLHETENSGRRLFCCS 198
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Query: 284 IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ RP++ K Q KLVL+G+ GK+SLVLRFV+GQF E+QE TIG
Sbjct: 1 MARPSN----KNIQAKLVLVGDMGTGKTSLVLRFVKGQFFEHQEPTIGA 45
>gi|358366102|dbj|GAA82723.1| RAB GTPase Ypt5 [Aspergillus kawachii IFO 4308]
Length = 199
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 108/174 (62%), Gaps = 30/174 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 33 AAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKS 92
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R + ++
Sbjct: 93 WVK---------------------ELQRQANENIVIALAGNKLDLVTESPDKRAIPTADA 131
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAKT+ NV E+F IAKKLP Q G R + T P
Sbjct: 132 EAYAREAGLLFFETSAKTSSNVKELFTAIAKKLPLD-----QAGPRNLRTTPRP 180
>gi|301091283|ref|XP_002895829.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262096540|gb|EEY54592.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 194
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 112/177 (63%), Gaps = 26/177 (14%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV L+D +T++FEIWDTAGQ LAPMYYR A AAI+VYD+TN+D+F AKS
Sbjct: 43 AAFLTQTVGLEDGLTVKFEIWDTAGQ---GNLAPMYYRGAAAAIVVYDVTNKDSFTGAKS 99
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVKE LQR PN+VIALAGNKADL +RR VE+ E Y
Sbjct: 100 WVKE---------------------LQRRGDPNVVIALAGNKADL-EARRKVEFEEAHQY 137
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
AE+N +L METSAKTA+NV ++FV IAK+LPK + + + S CC
Sbjct: 138 AEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPPQPEREAFPITPPQASKSKSGCC 194
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+Q K C +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 2 SQGKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 43
>gi|9988838|gb|AAG10794.1|AF296447_1 Rab5 [Toxoplasma gondii]
Length = 240
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 118/194 (60%), Gaps = 24/194 (12%)
Query: 59 CMTQIVINVVFYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQ 115
C+ FY Y S AAF+TQ+V L ++FEIWDTAGQERY +LAPMYYR A
Sbjct: 59 CLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTAGQERYRSLAPMYYRGAA 118
Query: 116 AAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGN 175
AA++VYDI+N+D+F AKSWV+ELQ + + N+VIALAGN
Sbjct: 119 AAVVVYDISNRDSFQGAKSWVQELQSVNDRS--------------------NVVIALAGN 158
Query: 176 KADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG 235
K DL R+ V E + YA+E+G+LF+ETSAKT NVNE+F EIA LPK + G
Sbjct: 159 KEDLAAERQ-VPKQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALPKTRKEHDPPG 217
Query: 236 RRLVETAEAPKTSN 249
+L +T E +S+
Sbjct: 218 FQLNKTQEQKSSSS 231
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
K +KLVLLG+++VGKS LV+RF + +F+EYQESTIG
Sbjct: 41 KTLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIG 78
>gi|336463884|gb|EGO52124.1| hypothetical protein NEUTE1DRAFT_132863 [Neurospora tetrasperma
FGSC 2508]
Length = 1001
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 118/192 (61%), Gaps = 36/192 (18%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSYRESTIG---------AAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AKSWVK ELQR A NI+I
Sbjct: 90 YRNANCAVVVYDITQAASLDKAKSWVK---------------------ELQRQANENIII 128
Query: 171 ALAGNKADL---PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL +R ++ ++ +AYA+E GLLF ETSAKTA NV +F EIAKKLP
Sbjct: 129 ALAGNKLDLVQEQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKLPLD 188
Query: 228 EV--NNGQGGRR 237
+V + + G+R
Sbjct: 189 QVGPRHARPGQR 200
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 54
>gi|340897464|gb|EGS17054.1| hypothetical protein CTHT_0073810 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 219
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 112/182 (61%), Gaps = 34/182 (18%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 37 FVKDQFDSYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 87
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AKSWVK ELQR A NI+I
Sbjct: 88 YRNANCAVVVYDITQAASLDKAKSWVK---------------------ELQRQANENIII 126
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL +R V+ ++ EAYA E GLLF ETSAKTA NV E+F IA+KLP
Sbjct: 127 ALAGNKLDLVADNPDKRAVQTADAEAYAREAGLLFFETSAKTAENVQELFTAIARKLPLD 186
Query: 228 EV 229
+V
Sbjct: 187 QV 188
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
P + + Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 7 PGARGNTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 52
>gi|237839103|ref|XP_002368849.1| Rab 5 [Toxoplasma gondii ME49]
gi|211966513|gb|EEB01709.1| Rab 5 [Toxoplasma gondii ME49]
Length = 241
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 121/195 (62%), Gaps = 25/195 (12%)
Query: 59 CMTQIVINVVFYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQ 115
C+ FY Y S AAF+TQ+V L ++FEIWDTAGQERY +LAPMYYR A
Sbjct: 59 CLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTAGQERYRSLAPMYYRGAA 118
Query: 116 AAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGN 175
AA++VYDI+N+D+F AKSWV+ELQ + + N+VIALAGN
Sbjct: 119 AAVVVYDISNRDSFQGAKSWVQELQSVNDRS--------------------NVVIALAGN 158
Query: 176 KADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQG 234
K DL R+ V E + YA+E+G+LF+ETSAKT NVNE+F EIA LPK ++ ++
Sbjct: 159 KEDLAAERQ-VPKQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALPKTRKEHDPHA 217
Query: 235 GRRLVETAEAPKTSN 249
G +L +T E +S+
Sbjct: 218 GFQLNKTQEQKSSSS 232
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
K +KLVLLG+++VGKS LV+RF + +F+EYQESTIG
Sbjct: 41 KTLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIG 78
>gi|85115075|ref|XP_964811.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|28926605|gb|EAA35575.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|38636468|emb|CAE82003.1| probable GTP-binding protein ypt5 [Neurospora crassa]
gi|350295957|gb|EGZ76934.1| putative GTP-binding protein ypt5 [Neurospora tetrasperma FGSC
2509]
Length = 220
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 113/182 (62%), Gaps = 34/182 (18%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSYRESTIG---------AAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AKSWVK ELQR A NI+I
Sbjct: 90 YRNANCAVVVYDITQAASLDKAKSWVK---------------------ELQRQANENIII 128
Query: 171 ALAGNKADL---PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL +R ++ ++ +AYA+E GLLF ETSAKTA NV +F EIAKKLP
Sbjct: 129 ALAGNKLDLVQEQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKLPLD 188
Query: 228 EV 229
+V
Sbjct: 189 QV 190
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 54
>gi|242808404|ref|XP_002485155.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
gi|218715780|gb|EED15202.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
Length = 218
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 102/154 (66%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL T +R + ++
Sbjct: 112 WVK---------------------ELQRQANENIIIALAGNKLDLVTENPDKRAIATADA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
EAYA+E GLLF ETSAKT NV E+F IAKKLP
Sbjct: 151 EAYAKEAGLLFFETSAKTTTNVKELFTAIAKKLP 184
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 52
>gi|380474214|emb|CCF45899.1| GTP-binding protein ypt5 [Colletotrichum higginsianum]
Length = 242
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 102/154 (66%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 76 AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKA 135
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL T +R V ++
Sbjct: 136 WVK---------------------ELQRQANENIIIALAGNKLDLVTEQPDKRAVSTADA 174
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
EAYA E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 175 EAYAREAGLLFFETSAKTAENVKELFTAIAKKLP 208
>gi|221502146|gb|EEE27890.1| RAB, putative [Toxoplasma gondii VEG]
Length = 241
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 121/195 (62%), Gaps = 25/195 (12%)
Query: 59 CMTQIVINVVFYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQ 115
C+ FY Y S AAF+TQ+V L ++FEIWDTAGQERY +LAPMYYR A
Sbjct: 59 CLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTAGQERYRSLAPMYYRGAA 118
Query: 116 AAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGN 175
AA++VYDI+N+D+F AKSWV+ELQ + + N+VIALAGN
Sbjct: 119 AAVVVYDISNRDSFQGAKSWVQELQSVNDRS--------------------NVVIALAGN 158
Query: 176 KADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQG 234
K DL R+ V E + YA+E+G+LF+ETSAKT NVNE+F EIA LPK ++ ++
Sbjct: 159 KEDLAAERQ-VPNQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALPKTRKEHDPHA 217
Query: 235 GRRLVETAEAPKTSN 249
G +L +T E +S+
Sbjct: 218 GFQLNKTQEQKSSSS 232
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
K +KLVLLG+++VGKS LV+RF + +F+EYQESTIG
Sbjct: 41 KTLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIG 78
>gi|212537727|ref|XP_002149019.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
gi|210068761|gb|EEA22852.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
Length = 218
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 113/187 (60%), Gaps = 31/187 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL T +R + ++
Sbjct: 112 WVK---------------------ELQRQANENIIIALAGNKLDLVTENPDKRAIATADA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV------NNGQGGRRLVETAEAP 245
EAYA+E GLLF ETSAKT NV E+F IAKKLP + N + G L A
Sbjct: 151 EAYAKEAGLLFFETSAKTNTNVKELFTAIAKKLPLDQAGPRNLRTNARPGVDLRPEAAGT 210
Query: 246 KTSNCCN 252
+ +N C+
Sbjct: 211 QGANGCS 217
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 52
>gi|29841162|gb|AAP06175.1| similar to NM_002868 RAB5B, member RAS oncogene family in Homo
sapiens [Schistosoma japonicum]
Length = 214
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 104/152 (68%), Gaps = 24/152 (15%)
Query: 76 AAFITQTVCLDD--VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+T V L+D T++ EIWDTAGQERYH+LAPMYYR AQAA++VYD+TN+D+F RAK
Sbjct: 42 AAFMTHMVVLEDPPTTVKLEIWDTAGQERYHSLAPMYYRGAQAAVVVYDVTNKDSFVRAK 101
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
SWV EL + A AK VIALAGNK DL ++R V + E +
Sbjct: 102 SWVNELNKNA-------NTAK--------------VIALAGNKVDL-EAQRVVSHEEAQE 139
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
YA +NGLLFMETSAKTA NV E+F IA++LP
Sbjct: 140 YANQNGLLFMETSAKTATNVPELFTAIAQRLP 171
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 296 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRL 350
CQ+KLV+LGESAVGKSS+V+R + QF EYQE+TIG + + PT +L
Sbjct: 6 CQFKLVILGESAVGKSSIVIRLCKSQFSEYQEATIGAAFMTHMVVLEDPPTTVKL 60
>gi|407916415|gb|EKG09787.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 219
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 101/154 (65%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LDD T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 53 AAFLTQTIALDDNTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKA 112
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NIVIALAGNK DL T +R + ++
Sbjct: 113 WVK---------------------ELQRQANENIVIALAGNKLDLVTENPDKRAIPAADA 151
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
E YA E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 152 EQYAREAGLLFFETSAKTAENVRELFTAIAKKLP 185
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 283 RIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
R+Q ++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 4 RVQPGGRPGGSRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIG 52
>gi|452847264|gb|EME49196.1| hypothetical protein DOTSEDRAFT_68068 [Dothistroma septosporum
NZE10]
Length = 224
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 108/169 (63%), Gaps = 29/169 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 53 AAFLTQTIALDEQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKA 112
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNKADL +R V ++
Sbjct: 113 WVK---------------------ELQRQANENIIIALAGNKADLVAEQPDKRAVPTTDA 151
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN----GQGGR 236
EAYA+E LLF ETSAKTA NV E+F IAKKLP ++ + G GR
Sbjct: 152 EAYAKEANLLFFETSAKTAENVKELFTAIAKKLPIEQASQRGMRGAAGR 200
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 281 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
R+Q+ A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 AARMQQGGRPGGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 53
>gi|108863008|gb|ABA99930.2| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
Length = 249
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 105/156 (67%), Gaps = 22/156 (14%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 37 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNA 96
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ A N PN ++ALAGNKAD+ +R+ V
Sbjct: 97 ASFTRAKKWVQELQ--AQGN-------------------PNTIMALAGNKADMVEARQ-V 134
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAK 222
E + YA+ENGL FMETSAKTA+NVN++F EI +
Sbjct: 135 PAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIGE 170
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGA 46
>gi|440635533|gb|ELR05452.1| rab family, other [Geomyces destructans 20631-21]
Length = 219
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 104/154 (67%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T ++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 53 AAFLTQTISLDEATTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKA 112
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL T +R ++ ++
Sbjct: 113 WVK---------------------ELQRQANENIIIALAGNKLDLVTEQQDKRVIQTADA 151
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
EAYA+E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 152 EAYAKEAGLLFFETSAKTSENVRELFTAIAKKLP 185
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 3/54 (5%)
Query: 279 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RG R N+ A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 3 ARGPPGARANN---ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 53
>gi|346323143|gb|EGX92741.1| Rab5-like protein ypt5 [Cordyceps militaris CM01]
Length = 220
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 117/201 (58%), Gaps = 39/201 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T ++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSFRESTIG---------AAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 90 YRNANCAVVVYDITQSASLDKAKAWVK---------------------ELQRQANENIII 128
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL T +R + ++ EAYA+E GLLF ETSAKTA NV E+F IA+KLP
Sbjct: 129 ALAGNKLDLVTEQPDKRAIPAADAEAYAKEAGLLFFETSAKTAENVPELFTAIARKLPLD 188
Query: 228 EVNNGQGGRRLVETAEAPKTS 248
Q G R + P S
Sbjct: 189 -----QAGPRHARPGQRPGVS 204
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF ++ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGA 54
>gi|295668134|ref|XP_002794616.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286032|gb|EEH41598.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 214
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 102/154 (66%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 AAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQVSSLDKAKS 111
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL +R ++ ++
Sbjct: 112 WVK---------------------ELQRQANENIIIALAGNKLDLVMDSPDKRAIQTADA 150
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
EAYA E GLLF ETSAK+A NV E+F IAKKLP
Sbjct: 151 EAYAREAGLLFFETSAKSATNVRELFTAIAKKLP 184
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 52
>gi|413933483|gb|AFW68034.1| putative GTP-binding protein [Zea mays]
Length = 199
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 105/156 (67%), Gaps = 22/156 (14%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 37 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNP 96
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ A N N ++ALAGNKAD+ +R+ V
Sbjct: 97 ASFTRAKKWVQELQ--AQGN-------------------QNTIVALAGNKADMLDARQ-V 134
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAK 222
E +AYA+ENGL FMETSAKTA+NVN+IF EI +
Sbjct: 135 PAEEAKAYAQENGLFFMETSAKTAINVNDIFYEIGE 170
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIG 45
>gi|398403677|ref|XP_003853305.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
gi|339473187|gb|EGP88281.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
Length = 225
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 107/169 (63%), Gaps = 29/169 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 53 AAFLTQTIALDEQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKA 112
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNKADL +R V ++
Sbjct: 113 WVK---------------------ELQRQANENIIIALAGNKADLVAEQPDKRAVPTADA 151
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN----GQGGR 236
EAYA E LLF ETSAKTA NV E+F IAKKLP ++ + G GR
Sbjct: 152 EAYAREANLLFFETSAKTAENVKELFTAIAKKLPIEQASQRGMRGAAGR 200
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 281 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
R+Q+ + A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 AARMQQGGRPSGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 53
>gi|193875876|gb|ACF24574.1| Ras-related small GTPase Rab5 [Gymnochlora stellata]
Length = 198
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 120/196 (61%), Gaps = 27/196 (13%)
Query: 59 CMTQIVINVVF---YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQ 115
C+ + V N F P + AAF+TQT+ L+D ++FEIWDTAGQERY +LAPMYYR A
Sbjct: 24 CVERFVKNEFFEFQQPTI-GAAFLTQTIPLEDYIVKFEIWDTAGQERYRSLAPMYYRGAA 82
Query: 116 AAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGN 175
AA++VYDIT+ D+F AK+W ++ELQR +IVI LAGN
Sbjct: 83 AALVVYDITDPDSFDGAKTW---------------------IQELQRQGAADIVIGLAGN 121
Query: 176 KADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG 235
K DL +S+R ++ E +++A+ENG +F ETSAKT NV EIFV IA+KLPK V Q
Sbjct: 122 KLDL-SSQRKIDSKEAKSFADENGCIFYETSAKTGANVQEIFVAIAQKLPKN-VLPPQND 179
Query: 236 RRLVETAEAPKTSNCC 251
+ + E + CC
Sbjct: 180 HITILSNEEKQNPGCC 195
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 29/35 (82%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+KLVLLG++AVGKSS V RFV+ +F E+Q+ TIG
Sbjct: 9 FKLVLLGDAAVGKSSCVERFVKNEFFEFQQPTIGA 43
>gi|453089344|gb|EMF17384.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 225
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 107/169 (63%), Gaps = 29/169 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 54 AAFLTQTIALDEQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKA 113
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNKADL +R V ++
Sbjct: 114 WVK---------------------ELQRQANENIIIALAGNKADLVAEQPDKRAVSTADA 152
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN----GQGGR 236
EAYA+E LLF ETSAKTA NV E+F IAKKLP ++ G GR
Sbjct: 153 EAYAKEANLLFFETSAKTAENVKELFTAIAKKLPIEQATQRGMRGAAGR 201
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 54
>gi|408400098|gb|EKJ79185.1| hypothetical protein FPSE_00660 [Fusarium pseudograminearum CS3096]
Length = 220
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 115/201 (57%), Gaps = 39/201 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NIVI
Sbjct: 90 YRNANCAVVVYDITQSASLDKAKAWVK---------------------ELQRQANENIVI 128
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL T +R + ++ EAYA E GLLF ETSAKTA NV +F IAKKLP
Sbjct: 129 ALAGNKLDLVTEQPDKRAISTADAEAYAREAGLLFFETSAKTAENVQTLFTAIAKKLPLD 188
Query: 228 EVNNGQGGRRLVETAEAPKTS 248
Q G R + P S
Sbjct: 189 -----QAGPRHARPGQRPGVS 204
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
T + Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 13 TNTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 54
>gi|401400583|ref|XP_003880812.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
gi|325115224|emb|CBZ50779.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
Length = 241
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 125/209 (59%), Gaps = 29/209 (13%)
Query: 59 CMTQIVINVVFYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQ 115
C+ FY Y S AAF+TQ+V L ++FEIWDTAGQERY +LAPMYYR A
Sbjct: 58 CLVVRFAKDEFYEYQESTIGAAFMTQSVDLGSCIVKFEIWDTAGQERYRSLAPMYYRGAA 117
Query: 116 AAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGN 175
AA++VYDI+N+D+F AKSWV+ELQ + + N+VIALAGN
Sbjct: 118 AAVVVYDISNRDSFQGAKSWVQELQTVNDRS--------------------NVVIALAGN 157
Query: 176 KADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQG 234
K DL R+ V E + YA+E+G+LF+ETSAKT NVNE+F EIA LPK ++ ++
Sbjct: 158 KEDLGAERQ-VPKQEAQQYADEHGILFIETSAKTGHNVNELFYEIAAALPKSRKEHDPHA 216
Query: 235 GRRLVETAEAPKTSNCCNTQFVQCKYKSS 263
G +L +T E +S + C KSS
Sbjct: 217 GFQLNKTQEQKSSSGS----WCACGGKSS 241
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 281 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
G R +RP + K +KLVLLG+++VGKS LV+RF + +F+EYQESTIG
Sbjct: 28 GYRGERPAGEV-PKTLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIG 77
>gi|358390924|gb|EHK40329.1| hypothetical protein TRIATDRAFT_132347 [Trichoderma atroviride IMI
206040]
Length = 220
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 115/201 (57%), Gaps = 39/201 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSFRESTI---------GAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 90 YRNANCAVVVYDITQSASLDKAKAWVK---------------------ELQRQANENIII 128
Query: 171 ALAGNKADL---PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL +R + ++ EAYA E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 129 ALAGNKLDLVNEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLD 188
Query: 228 EVNNGQGGRRLVETAEAPKTS 248
Q G R + P S
Sbjct: 189 -----QAGPRHARPGQRPGVS 204
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF ++ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGA 54
>gi|430812572|emb|CCJ30031.1| unnamed protein product [Pneumocystis jirovecii]
Length = 193
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 116/205 (56%), Gaps = 43/205 (20%)
Query: 76 AAFITQTVCLDDVT-IRFEIW---DTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGR 131
AAF+TQT+CLD+ T I+FEIW DTAGQERY +LAPMYYRNA AI+VYDIT ++ +
Sbjct: 11 AAFLTQTLCLDETTVIKFEIWLLRDTAGQERYRSLAPMYYRNADCAIVVYDITQTESLDK 70
Query: 132 AKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEG 191
AKSWV KEL R A NIVIALAGNKADL SRR VE S+
Sbjct: 71 AKSWV---------------------KELHRQACGNIVIALAGNKADLA-SRRAVETSDA 108
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEI----------------AKKLPKKEVNNGQGG 235
+AYAEE GL+F ETSAK A NVN +F I AKKLP + +
Sbjct: 109 QAYAEEAGLIFFETSAKDAQNVNNLFQAIGKVFFFKISILFTMCLAKKLPLEHTTSKPRS 168
Query: 236 RRLVETAEAPKTSNCCNTQFVQCKY 260
L + + S+ NT C Y
Sbjct: 169 SGLTRDVDLSRRSSIANTS-STCNY 192
>gi|384252326|gb|EIE25802.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 199
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 128/211 (60%), Gaps = 33/211 (15%)
Query: 51 IWLKDRVDCMTQIVINVV---FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D + +V+ V F+ Y S AAF+T+T+ + ++FEIWDTAGQERYH
Sbjct: 13 VLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAAFLTKTI--PEKGVKFEIWDTAGQERYH 70
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AA++V+DITN ++F +AK+WVK ELQR
Sbjct: 71 SLAPMYYRGAAAAVVVFDITNAESFAKAKNWVK---------------------ELQRQG 109
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
PN+++ALAGNKADL ++R V + +AYA+EN L F ETSAKT +NV E+F +IA++L
Sbjct: 110 NPNMIMALAGNKADL-AAQRAVTSEDAKAYADENSLFFWETSAKTNVNVAEVFHDIAERL 168
Query: 225 PKKEV--NNGQGGRRLVETA-EAPKTSNCCN 252
P+ GG L ET E K S CC+
Sbjct: 169 PRASAAPQPPVGGITLTETVPERAKKSACCS 199
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
I Q KLVLLG+ GKSSLVLRFV+GQF +YQESTIG
Sbjct: 7 IQQAKLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGA 44
>gi|429852674|gb|ELA27799.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 221
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 109/178 (61%), Gaps = 34/178 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 40 FVKDQFDSYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 90
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 91 YRNANCAVVVYDITQSASLDKAKAWVK---------------------ELQRQANENIII 129
Query: 171 ALAGNKADL---PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
ALAGNK DL +R V ++ EAYA E GLLF ETSAKTA NV ++F IAKKLP
Sbjct: 130 ALAGNKLDLVNEQPDKRAVSTADAEAYAREAGLLFFETSAKTAENVKDLFTAIAKKLP 187
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 17 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 55
>gi|195643312|gb|ACG41124.1| ras-related protein RHN1 [Zea mays]
Length = 203
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 116/189 (61%), Gaps = 25/189 (13%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 37 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNP 96
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+ K W V+ELQ PN ++ALAGNK D+ +R V
Sbjct: 97 ASTTCTKKW---------------------VQELQAQGNPNTIVALAGNKVDMLDARH-V 134
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQGGRRLVETAEAP 245
E + YA+ENGL FMETSAKTA+NVN+IF EIAK+L + +E + Q G L + +
Sbjct: 135 AVEEAKTYAQENGLFFMETSAKTAINVNDIFYEIAKRLLQGQEAPSPQAGIVLNQRPDER 194
Query: 246 --KTSNCCN 252
TS+CC+
Sbjct: 195 MVSTSSCCS 203
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 46
>gi|388520843|gb|AFK48483.1| unknown [Lotus japonicus]
Length = 210
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 115/182 (63%), Gaps = 28/182 (15%)
Query: 51 IWLKDRVDCMTQIVINVV---FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D T + + V FYP AAF TQ + L + T++F+IWDTAGQERYH
Sbjct: 14 VLLGDMGTGKTSLALRFVKGQFYPNQEPTVGAAFFTQILSLSEATVKFDIWDTAGQERYH 73
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AAI+VYDI++ DTF +A+ WV+ELQR G K
Sbjct: 74 SLAPMYYRGAAAAIVVYDISSIDTFVQAEKWVQELQR--------HGNQK---------- 115
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
+V+ALA NK+DL +R VE EGE +A+ENG+ +METSAKTA N+NE+F EIAK+L
Sbjct: 116 ---LVMALAANKSDL-EPKREVETEEGEKFAQENGMFYMETSAKTAENINELFYEIAKRL 171
Query: 225 PK 226
+
Sbjct: 172 AR 173
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI Q KLVLLG+ GK+SL LRFV+GQF+ QE T+G
Sbjct: 7 KIIQAKLVLLGDMGTGKTSLALRFVKGQFYPNQEPTVGA 45
>gi|302927547|ref|XP_003054520.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735461|gb|EEU48807.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 220
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 115/201 (57%), Gaps = 39/201 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 90 YRNANCAVVVYDITQSASLDKAKAWVK---------------------ELQRQANENIII 128
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL T +R + ++ EAYA E GLLF ETSAKTA NV +F IAKKLP
Sbjct: 129 ALAGNKLDLVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVANLFTAIAKKLPLD 188
Query: 228 EVNNGQGGRRLVETAEAPKTS 248
Q G R + P S
Sbjct: 189 -----QAGPRHARPGQRPGVS 204
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
T + Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 13 TNTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 54
>gi|169596668|ref|XP_001791758.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
gi|111071476|gb|EAT92596.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
Length = 222
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 110/178 (61%), Gaps = 34/178 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 40 FVKDQFDDYRESTI---------GAAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPMY 90
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 91 YRNANCAVVVYDITQAASLDKAKAWVK---------------------ELQRQANENIII 129
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
ALAGNK DL T +R ++ ++ E YA E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 130 ALAGNKLDLVTESPDKRAIQTADAEQYAREAGLLFFETSAKTSENVRELFTAIAKKLP 187
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 285 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
QRP + ++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 9 QRPGG-SGSRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 55
>gi|449444622|ref|XP_004140073.1| PREDICTED: ras-related protein RABF1-like [Cucumis sativus]
gi|449490416|ref|XP_004158599.1| PREDICTED: ras-related protein RABF1-like [Cucumis sativus]
Length = 199
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 114/181 (62%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L D T++FEIWDTAGQERY
Sbjct: 46 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTIALQDSTTVKFEIWDTAGQERYAA 96
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A+IVYDIT+ D+F +A+ WVK ELQ+
Sbjct: 97 LAPLYYRGAAVAVIVYDITSSDSFAKAQYWVK---------------------ELQKHGS 135
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P+I++AL GNKADL R+ V +G YAE+NG+ F+ETSAKTA N+NE+F EIAK+LP
Sbjct: 136 PDIILALVGNKADLQEKRK-VTVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLP 194
Query: 226 K 226
+
Sbjct: 195 R 195
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 277 SNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE--- 333
++GR G + N +K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 11 ASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLS 70
Query: 334 ----CQSSHSISFSM 344
Q S ++ F +
Sbjct: 71 QTIALQDSTTVKFEI 85
>gi|403419564|emb|CCM06264.1| predicted protein [Fibroporia radiculosa]
Length = 204
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 106/164 (64%), Gaps = 23/164 (14%)
Query: 74 FSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRA 132
AAF+TQTV L+D T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +A
Sbjct: 36 IGAAFLTQTVTLEDQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQTASLEKA 95
Query: 133 KSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGE 192
+SW++E LQR A P+IVIAL GNK+DL +RR V E +
Sbjct: 96 RSWIRE---------------------LQRQADPSIVIALCGNKSDL-AARRQVTEEEAK 133
Query: 193 AYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR 236
YA+E GL++ ETSAKT V EIF IAKKLP+ + +GGR
Sbjct: 134 KYADEEGLMWCETSAKTGEGVQEIFTAIAKKLPQNAPPSARGGR 177
>gi|395334217|gb|EJF66593.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 252
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 110/198 (55%), Gaps = 55/198 (27%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA++VYD+T
Sbjct: 47 IGAAFLTQKCRLEDRVLRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDVTK-------- 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-------------- 179
+ +AK+WVKELQR A PNIVIALAGNK DL
Sbjct: 99 -------------ASSLEKAKTWVKELQRQANPNIVIALAGNKIDLVTPSASSSSAAAES 145
Query: 180 -------------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEI 220
P S R V E EAYA+E GLLF ETSAKT V EIF EI
Sbjct: 146 EDEADDATATPGETATSGEPESLRQVPRDEAEAYAQEAGLLFFETSAKTGEGVVEIFTEI 205
Query: 221 AKKLPKKEV-NNGQGGRR 237
AKK+P ++ + +GG+R
Sbjct: 206 AKKIPIDQILVSSRGGQR 223
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 14 QVKLVLLGEAAVGKSSIVLRFVSNEFQPNKEPTIG 48
>gi|451852641|gb|EMD65936.1| hypothetical protein COCSADRAFT_198789 [Cochliobolus sativus
ND90Pr]
gi|451997104|gb|EMD89569.1| hypothetical protein COCHEDRAFT_1021897 [Cochliobolus
heterostrophus C5]
Length = 221
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 101/154 (65%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 54 AAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKA 113
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL T +R + ++
Sbjct: 114 WVK---------------------ELQRQANENIIIALAGNKLDLVTESPDKRAISTADA 152
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
E YA E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 153 EQYAREAGLLFFETSAKTSENVKELFTAIAKKLP 186
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 281 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GR+Q+ ++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 3 AGRMQQGQRPGGSRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 54
>gi|168030601|ref|XP_001767811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680893|gb|EDQ67325.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 106/152 (69%), Gaps = 23/152 (15%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
A+F++QT+ L D T ++FEIWDTAGQERY +LAP+YYR A AA++VYDITN +TF +A+
Sbjct: 37 ASFLSQTISLQDSTNVKFEIWDTAGQERYASLAPLYYRGAAAAVVVYDITNPETFLKAQF 96
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVK ELQ+ P+IV+AL GNKADL R V ++E +AY
Sbjct: 97 WVK---------------------ELQKHGNPDIVMALVGNKADLENERE-VSHAEAQAY 134
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
A+ NG+ F+ETSAKT+ NVN++F EIAK+LP+
Sbjct: 135 AKSNGMFFIETSAKTSENVNQLFEEIAKRLPR 166
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 300 LVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
LVLLG+S VGKS ++LRFVRGQF + T+G
Sbjct: 5 LVLLGDSGVGKSCILLRFVRGQFDPSSKVTVGA 37
>gi|356556138|ref|XP_003546384.1| PREDICTED: ras-related protein RABF2b-like [Glycine max]
Length = 200
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 113/182 (62%), Gaps = 28/182 (15%)
Query: 51 IWLKDRVDCMTQIVINVV---FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYH 104
+ L D T I + V F+P AAF TQ + L + T++F+IWDTAGQERYH
Sbjct: 14 VLLGDMGTGKTSIALRFVKGHFFPNQEPTIGAAFFTQILSLSEATVKFDIWDTAGQERYH 73
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
+LAPMYYR A AAI+VYDI++ DTF RAK WV+ELQ T G KS
Sbjct: 74 SLAPMYYRGAAAAIVVYDISSVDTFVRAKKWVQELQ--------THGNQKS--------- 116
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
V+AL NK+DL +R VE GE +A+ENG+ +METSAKTA N+NE+F EIAK+L
Sbjct: 117 ----VMALVANKSDL-EPKREVEAEVGEQFAQENGMFYMETSAKTAENINELFYEIAKRL 171
Query: 225 PK 226
+
Sbjct: 172 AR 173
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KI Q KLVLLG+ GK+S+ LRFV+G F QE TIG
Sbjct: 7 KIIQAKLVLLGDMGTGKTSIALRFVKGHFFPNQEPTIGA 45
>gi|189202136|ref|XP_001937404.1| GTP-binding protein YPT52 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187984503|gb|EDU49991.1| GTP-binding protein YPT52 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 218
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 119/205 (58%), Gaps = 38/205 (18%)
Query: 29 QIPKGNWFSM--MSGKRQSDCMAQI--WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVC 84
Q P G+ F+ + + C + + ++KD+ D + I AAF+TQT+
Sbjct: 9 QRPGGSRFAQFKLESPQSERCSSLVLRFVKDQFDDYRESTI---------GAAFLTQTIA 59
Query: 85 LDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMA 143
LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+WVK
Sbjct: 60 LDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVK------ 113
Query: 144 PPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEGEAYAEENGL 200
ELQR A NI+IALAGNK DL T +R + ++ E YA E GL
Sbjct: 114 ---------------ELQRQANENIIIALAGNKLDLVTESPDKRAISTADAEQYAREAGL 158
Query: 201 LFMETSAKTAMNVNEIFVEIAKKLP 225
LF ETSAKT NV E+F IAKKLP
Sbjct: 159 LFFETSAKTCENVKELFTAIAKKLP 183
>gi|302698433|ref|XP_003038895.1| hypothetical protein SCHCODRAFT_73684 [Schizophyllum commune H4-8]
gi|300112592|gb|EFJ03993.1| hypothetical protein SCHCODRAFT_73684 [Schizophyllum commune H4-8]
Length = 256
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 116/230 (50%), Gaps = 72/230 (31%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA++VYDIT + +AK
Sbjct: 47 IGAAFLTQKCRLEDRVLRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDITKAASLEKAK 106
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-------------- 179
SWVKEL QR A PNIVIALAGNK DL
Sbjct: 107 SWVKEL---------------------QRQANPNIVIALAGNKVDLVQSAGSSSGGGNSS 145
Query: 180 ----------------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIF 217
P S R V E +AYA E GLLF ETSAKT NVN +F
Sbjct: 146 ESEDEADDATATPGEAAAPDGSPESLRQVPREEAQAYATEAGLLFFETSAKTGENVNTVF 205
Query: 218 VEIAKKLPKKEV-------------NNGQGGRRL--VETAEAPKTSNCCN 252
EIAKK+P + + ++ GGR V +EA K CN
Sbjct: 206 TEIAKKIPIEHILASTRGGAGRPGASSRPGGRPEGDVNLSEAAKPKEACN 255
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 11 KSVQVKLVLLGEAAVGKSSVVLRFVSDEFQPNKEPTIGA 49
>gi|164661221|ref|XP_001731733.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
gi|159105634|gb|EDP44519.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
Length = 220
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 102/163 (62%), Gaps = 25/163 (15%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV D TI+ EIWDTAGQERY +LAPMYYRNA A++VYDIT Q++F AKS
Sbjct: 41 AAFLTQTVRRQDGATIKLEIWDTAGQERYKSLAPMYYRNAHCALVVYDITEQESFENAKS 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++ ELQR A NI IAL GNK DL + R V +G+ Y
Sbjct: 101 WIR---------------------ELQRHADANITIALVGNKLDLAETSRTVSAEDGQKY 139
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRR 237
A+ GL+FMETSAKT NV E+F +A KLP ++ G G +R
Sbjct: 140 ADSEGLMFMETSAKTPTNVTELFTLVANKLP---LDRGMGVKR 179
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ + +KLVLLGES+VGKSS+ LRFV+ QF +Y+ESTIG
Sbjct: 2 SSVASFKLVLLGESSVGKSSVALRFVKDQFEDYRESTIGA 41
>gi|330936207|ref|XP_003305289.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
gi|311317754|gb|EFQ86627.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
Length = 220
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 100/154 (64%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 53 AAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKA 112
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL T +R + ++
Sbjct: 113 WVK---------------------ELQRQANENIIIALAGNKLDLVTESPDKRAISTADA 151
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
E YA E GLLF ETSAKT NV E+F IAKKLP
Sbjct: 152 EQYAREAGLLFFETSAKTCENVKELFTAIAKKLP 185
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 3/48 (6%)
Query: 285 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
QRP ++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 9 QRPGG---SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 53
>gi|169844272|ref|XP_001828857.1| GTP-binding protein ypt5 [Coprinopsis cinerea okayama7#130]
gi|116509969|gb|EAU92864.1| GTP-binding protein ypt5 [Coprinopsis cinerea okayama7#130]
Length = 257
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 115/222 (51%), Gaps = 63/222 (28%)
Query: 65 INVVFYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVY 121
+N F P AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA++VY
Sbjct: 34 VNNEFQPNKEPTIGAAFLTQKCRLEDRILRYEIWDTAGQERFHSLAPMYYRNAQAAVVVY 93
Query: 122 DITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-- 179
D+T + +AKSWVKEL QR A PNIVIALAGNK DL
Sbjct: 94 DVTKASSLEKAKSWVKEL---------------------QRQANPNIVIALAGNKVDLVQ 132
Query: 180 ----------------------------------PTSRRCVEYSEGEAYAEENGLLFMET 205
P S R V E +AYA+E GLLF ET
Sbjct: 133 PSSSSSGTGASSESEDEADDATATGGEAPASSAEPESLRQVPREEAQAYAQEAGLLFFET 192
Query: 206 SAKTAMNVNEIFVEIAKKLPKKEV---NNGQGGRRLVETAEA 244
SAKT + EIF EIAKK+P + + + G GR V A A
Sbjct: 193 SAKTGEGIVEIFTEIAKKIPIEHILASSRGNAGRPGVNGARA 234
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 10 KSVQVKLVLLGEAAVGKSSVVLRFVNNEFQPNKEPTIGA 48
>gi|384493359|gb|EIE83850.1| hypothetical protein RO3G_08555 [Rhizopus delemar RA 99-880]
Length = 238
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 105/177 (59%), Gaps = 37/177 (20%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L D I+FEIWDTAGQER+H+LAPMYYRNAQAAI+VYDITN T +AKSW
Sbjct: 60 AAFLTQKCNLKDRCIKFEIWDTAGQERFHSLAPMYYRNAQAAIVVYDITNASTLDKAKSW 119
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-----------PTSRR 184
VKELQR A N D IVIAL GNK DL R
Sbjct: 120 VKELQRQA--NTD-------------------IVIALVGNKLDLVEGQDGEPLNDEEHER 158
Query: 185 CVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-----NGQGGR 236
V + +AYA+E GLLF ETSAK A NV+++F I K+P + V+ N GGR
Sbjct: 159 KVLKEDAQAYADEAGLLFFETSAKLAQNVDQVFGSIGHKIPLESVHSSNSRNAAGGR 215
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 29/40 (72%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K+ KLVLLGESAVGKSS+ LRFV Q+ E +E TIG
Sbjct: 21 GKMKHVKLVLLGESAVGKSSIALRFVNRQYIENREPTIGA 60
>gi|221052324|ref|XP_002257738.1| Rab5c GTPase [Plasmodium knowlesi strain H]
gi|193807569|emb|CAQ38074.1| Rab5c GTPase, putative [Plasmodium knowlesi strain H]
Length = 213
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 114/186 (61%), Gaps = 27/186 (14%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
FY Y S AAF+TQ + + + TI+FEIWDTAGQERY +LAPMYYR A AA+IVYDITN
Sbjct: 52 FYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQERYRSLAPMYYRGASAAVIVYDITN 111
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F A K W+ EL+ + +I+IALAGNK DL + R
Sbjct: 112 KKSFEGA---------------------KGWIHELKSVHSNDIIIALAGNKKDLEKN-RV 149
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
V+ E++A N +LF+ETSAKT NVNE+F+ IAKKLP ++ + G ++ T EA
Sbjct: 150 VDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLPLQKEQDKFSGIQISNTEEAK 209
Query: 246 KTSNCC 251
K CC
Sbjct: 210 KK--CC 213
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 6/64 (9%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
++N NNS+ GG N KI KLVLLG+++VGKS +V+RF + +F+EYQES
Sbjct: 5 LSNLNNSDKYD-GGSNYHSN-----KIFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQES 58
Query: 329 TIGG 332
TIG
Sbjct: 59 TIGA 62
>gi|392571611|gb|EIW64783.1| GTP-binding protein ypt5 [Trametes versicolor FP-101664 SS1]
Length = 254
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 107/200 (53%), Gaps = 58/200 (29%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA++VYD+T
Sbjct: 47 IGAAFLTQKCRLEDRVLRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDVTK-------- 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-------------- 179
+ +AK+WVKELQR A PNIVIALAGNK DL
Sbjct: 99 -------------ASSLEKAKTWVKELQRQANPNIVIALAGNKIDLVTPSASSSSSTTAE 145
Query: 180 --------------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVE 219
P S R V E EAYA+E GLLF ETSAKT V EIF E
Sbjct: 146 SEDEADDATATPGETATSGEPESLRQVPRDEAEAYAQEAGLLFFETSAKTGDGVVEIFTE 205
Query: 220 IAKKLPKKEV---NNGQGGR 236
IAKK+P ++ G GR
Sbjct: 206 IAKKIPIDQILASTRGGAGR 225
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 14 QVKLVLLGEAAVGKSSIVLRFVSNEFQPNKEPTIG 48
>gi|325183801|emb|CCA18260.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 211
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 112/172 (65%), Gaps = 26/172 (15%)
Query: 59 CMTQIVINVVFYPY---LFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNA 114
C+ + F+ Y AAF+TQTV LDD V ++FEIWDTAGQERY +LAPMYYR A
Sbjct: 38 CLVVRFVRNEFFEYQEPTIGAAFLTQTVDLDDEVMVKFEIWDTAGQERYRSLAPMYYRGA 97
Query: 115 QAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAG 174
AA++VYD+TN+D+F AKSWVKE LQR PN+VIALAG
Sbjct: 98 AAAVVVYDVTNKDSFIGAKSWVKE---------------------LQRRGDPNVVIALAG 136
Query: 175 NKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
NKADL SRR V+ E YA +N +L +ETSAKTA NV ++F+ IAK+LPK
Sbjct: 137 NKADL-ESRRKVDSEEARQYALDNDILHLETSAKTANNVQDLFIAIAKRLPK 187
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
TQ K C +KLVLLG++AVGKS LV+RFVR +F EYQE TIG
Sbjct: 17 TQRKTCHFKLVLLGDTAVGKSCLVVRFVRNEFFEYQEPTIGA 58
>gi|156083945|ref|XP_001609456.1| Ras-related protein Rab-5 [Babesia bovis T2Bo]
gi|154796707|gb|EDO05888.1| Ras-related protein Rab-5 [Babesia bovis]
Length = 222
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 109/190 (57%), Gaps = 30/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQ+V LDD T++FEIWDTAGQERY TLAPMYYR + AA+IVYDIT +++
Sbjct: 60 FQESTIGAAFMTQSVSLDDCTVKFEIWDTAGQERYRTLAPMYYRGSSAAVIVYDITMRES 119
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F +AK W ++ELQ PN+V+ALAGNK DL +SR V
Sbjct: 120 FQQAKGW---------------------IQELQAHVGPNVVLALAGNKVDLDSSRE-VSR 157
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTS 248
E +A N +FMETSAK V E+F EIAK +PK GRR+ E E K
Sbjct: 158 EVAEEFAGANNCIFMETSAKNGDMVQELFTEIAKAIPK--------GRRIKELHEGFKID 209
Query: 249 NCCNTQFVQC 258
N + + C
Sbjct: 210 NQSHLPKINC 219
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 288 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
++ T Q+KLV+LG+++VGKSSLV RFV+ F E+QESTIG
Sbjct: 23 DESTGHSFYQFKLVILGDTSVGKSSLVGRFVKNTFLEFQESTIGA 67
>gi|396468450|ref|XP_003838176.1| hypothetical protein LEMA_P117000.1 [Leptosphaeria maculans JN3]
gi|312214743|emb|CBX94697.1| hypothetical protein LEMA_P117000.1 [Leptosphaeria maculans JN3]
Length = 362
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 102/154 (66%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 195 AAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKA 254
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVKELQR A E NI+IALAGNK DL T +R + ++
Sbjct: 255 WVKELQRQA--------------NE-------NIIIALAGNKLDLVTESPDKRAITTADA 293
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
E YA E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 294 EQYAREAGLLFFETSAKTSENVRELFTAIAKKLP 327
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 292 QAKICQYKLVLLGESAVGKSSLVLRFVRG---QFHEYQESTIGG 332
+A +C GESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 152 KASLCLPANECTGESAVGKSSLVLRFVKACADQFDDYRESTIGA 195
>gi|302694753|ref|XP_003037055.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune H4-8]
gi|300110752|gb|EFJ02153.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune H4-8]
Length = 208
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 108/180 (60%), Gaps = 23/180 (12%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LDD T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +A++
Sbjct: 41 AAFLTQTVTLDDGTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSTSLEKART 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++E LQR A P+IVIAL GNKADL +RR V E + Y
Sbjct: 101 WIRE---------------------LQRQADPSIVIALCGNKADLA-ARRQVTQEEAQKY 138
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCCNTQ 254
AEE GL++ ETSAKT V +IF IAKKLP + + G T A N N Q
Sbjct: 139 AEEEGLMWGETSAKTGEGVADIFTAIAKKLPLTAPPSARSGGAARGTTAARNGVNLTNQQ 198
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKHFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|299756416|ref|XP_001829316.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
gi|298411667|gb|EAU92276.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
Length = 206
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 108/180 (60%), Gaps = 27/180 (15%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LDD T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +A++
Sbjct: 41 AAFLTQTVTLDDQSTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKART 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++E LQR A P+IVIAL GNK DL +RR V E + Y
Sbjct: 101 WIRE---------------------LQRQADPSIVIALCGNKLDL-AARRQVSQEEAQKY 138
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCCNTQ 254
AEE GL++ ETSAKT V EIF IAKKLP + + G A P+T N Q
Sbjct: 139 AEEEGLMWAETSAKTGEGVQEIFTAIAKKLPLTAPPSARAGG----AARTPRTGVDLNKQ 194
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|224097801|ref|XP_002311076.1| predicted protein [Populus trichocarpa]
gi|222850896|gb|EEE88443.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 114/181 (62%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ I A+F++QT+ L D T++FEIWDTAGQERY
Sbjct: 48 CIVLRFVRGQFDPTSKVTIG---------ASFLSQTIALQDSTTVKFEIWDTAGQERYAA 98
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A+IVYDIT+ +TF +A+ WVK ELQ+
Sbjct: 99 LAPLYYRGAAVAVIVYDITSPETFNKAQYWVK---------------------ELQKHGS 137
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P+IV+AL GNKADL +R V +G YAE+NG+ FMETSAKTA N+N++F EIAK+LP
Sbjct: 138 PDIVMALVGNKADL-QEKREVPTQDGIDYAEKNGMFFMETSAKTADNINQLFEEIAKRLP 196
Query: 226 K 226
+
Sbjct: 197 R 197
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 17/79 (21%)
Query: 273 NNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
NNS S G AK + KLVLLG+S VGKS +VLRFVRGQF + TIG
Sbjct: 19 NNSESGG----------VVDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGA 68
Query: 333 E-------CQSSHSISFSM 344
Q S ++ F +
Sbjct: 69 SFLSQTIALQDSTTVKFEI 87
>gi|32492054|gb|AAP85299.1| Rab5, partial [Babesia bovis]
Length = 208
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 108/190 (56%), Gaps = 30/190 (15%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+TQ+V LDD T++FEIWDTAGQERY TLAPMYYR + AA+IVYDIT ++
Sbjct: 46 FQESTIGAAFMTQSVSLDDCTVKFEIWDTAGQERYRTLAPMYYRGSSAAVIVYDITMHES 105
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F +AK W ++ELQ PN+V+ALAGNK DL +SR V
Sbjct: 106 FQQAKGW---------------------IQELQAHVGPNVVLALAGNKVDLDSSRE-VSR 143
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTS 248
E +A N +FMETSAK V E+F EIAK +PK GRR+ E E K
Sbjct: 144 EVAEEFAGANNCIFMETSAKNGDMVQELFTEIAKAIPK--------GRRIKELHEGFKID 195
Query: 249 NCCNTQFVQC 258
N + + C
Sbjct: 196 NQSHLPKINC 205
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 288 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
++ T Q++LV+LG+++VGKSSL RFVR F E+QESTIG
Sbjct: 9 DESTGHSFYQFELVILGDTSVGKSSLDGRFVRNTFLEFQESTIGA 53
>gi|328856833|gb|EGG05952.1| hypothetical protein MELLADRAFT_116620 [Melampsora larici-populina
98AG31]
Length = 216
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 100/151 (66%), Gaps = 23/151 (15%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LDD TI++EIWDTAGQERY +LAPMYYRNA A++VYDIT+ + +AK+
Sbjct: 49 AAFLTQTVQLDDQTTIKYEIWDTAGQERYKSLAPMYYRNANCAVVVYDITSSASLEKAKN 108
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W ++ELQR A IVIALAGNKADL RR V ++ +
Sbjct: 109 W---------------------IRELQRQADSQIVIALAGNKADLE-ERRQVSTADARQF 146
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
AEE LLF ETSAK A NV+EIF IAKKLP
Sbjct: 147 AEEENLLFFETSAKDATNVHEIFQAIAKKLP 177
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 286 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN A Q+KLVLLGESAVGKSSLVLRFV+ F EY+ESTIG
Sbjct: 5 RPNSTRPA--YQFKLVLLGESAVGKSSLVLRFVQNDFQEYRESTIGA 49
>gi|406604593|emb|CCH43933.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 239
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 99/158 (62%), Gaps = 23/158 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQD 127
F AAF+TQT+ LDD T I+FEIWDTAGQERY +LAPMYYRNA AAI+VYDIT +
Sbjct: 73 FRESTIGAAFLTQTIQLDDTTTIKFEIWDTAGQERYKSLAPMYYRNANAAIVVYDITQES 132
Query: 128 TFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVE 187
+ RAK+W KELQR A +IVIALAGNK DL S+R V
Sbjct: 133 SLERAKAW---------------------TKELQRQANQDIVIALAGNKVDLE-SQRQVP 170
Query: 188 YSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
E +A E GLLF E SAK+ + EIF +IA+KLP
Sbjct: 171 KEIAETFASEEGLLFFEVSAKSGEGIKEIFTKIAEKLP 208
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 283 RIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RI N + + Q+KLVLLGESAVGKSS+V RFV+ F +++ESTIG
Sbjct: 31 RIMATNTSPETRFAQFKLVLLGESAVGKSSVVHRFVKDSFDDFRESTIGA 80
>gi|156035889|ref|XP_001586056.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980]
gi|154698553|gb|EDN98291.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 221
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 107/178 (60%), Gaps = 34/178 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 38 FVKDQFDDYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 88
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AKSWVK ELQR A NI+I
Sbjct: 89 YRNANCAVVVYDITQASSLDKAKSWVK---------------------ELQRQANENIII 127
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
ALAGNK DL T +R + + YA E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 128 ALAGNKLDLVTEQPDKRAITTEDASNYAREAGLLFFETSAKTSENVRELFTAIAKKLP 185
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 35/39 (89%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIG 52
>gi|448111644|ref|XP_004201890.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359464879|emb|CCE88584.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 111/193 (57%), Gaps = 38/193 (19%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + + TI++EIWDTAGQER+ +LAPMYYRNAQAA++VYDIT +F +A+ W
Sbjct: 44 AAFLTQKCTIGERTIKYEIWDTAGQERFSSLAPMYYRNAQAALVVYDITKAASFIKARRW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR-------RCVEY 188
VKELQ A +I IAL GNK DL S R V
Sbjct: 104 ---------------------VKELQDQASKDITIALVGNKYDLVESDKDGEDGLRAVSI 142
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN----------GQGGRRL 238
EG+ AEE GLLF ETSAKTA NVNE+F++I KK+P+ +N G GR
Sbjct: 143 EEGKKLAEEEGLLFFETSAKTAHNVNEVFIDIGKKIPENLTSNRPGTGATGSSGSDGRID 202
Query: 239 VETAEAPKTSNCC 251
+ + P T++ C
Sbjct: 203 LSSTPNPSTNDSC 215
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 28/37 (75%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+ KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 7 VTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIG 43
>gi|388579646|gb|EIM19967.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 231
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 104/181 (57%), Gaps = 41/181 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L+D I+FEIWDTAGQER+ +LAPMYYRNA +A++VYDIT+ +F +AKSW
Sbjct: 44 AAFLTQKCRLEDKVIKFEIWDTAGQERFRSLAPMYYRNALSAVVVYDITSSSSFEKAKSW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
VKEL QR A PN++IAL GNK DL
Sbjct: 104 VKEL---------------------QRQASPNVIIALVGNKLDLVEGSQEEEEEERDDAT 142
Query: 180 ----PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG 235
R + E +AYAEE+ LLF ETSAKT V E+F EIAKK+P +++ N
Sbjct: 143 ATPNQDQSRAISRDEAQAYAEESNLLFFETSAKTGEGVVEVFTEIAKKIPLEQIVNSTKS 202
Query: 236 R 236
R
Sbjct: 203 R 203
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K Q KLVLLGE+AVGKSS+VLRFV+ F EY+E TIG
Sbjct: 6 KPVQVKLVLLGEAAVGKSSVVLRFVQNDFQEYKEPTIGA 44
>gi|428671198|gb|EKX72116.1| Ras family Rab small STP-binding protein [Babesia equi]
Length = 257
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 111/164 (67%), Gaps = 23/164 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
+AF+ T+ +DD TI FEIWDTAGQERY TLAPMYYR + AAIIVYDIT +D+F +AKSW
Sbjct: 102 SAFVKHTIKVDDATIIFEIWDTAGQERYRTLAPMYYRGSAAAIIVYDITVRDSFDQAKSW 161
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
++EL KS+V+ PNIV+ LAGNK DL +R V + +A
Sbjct: 162 IQEL--------------KSYVE-------PNIVLGLAGNKVDLE-DQRSVNLDIVKEFA 199
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQGGRRL 238
+ N +FMETSAKT N+N++F+E+A+K+P+ K VN+ Q G R+
Sbjct: 200 KANDCIFMETSAKTGHNINKLFMELARKIPREKRVNDFQSGFRI 243
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 281 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
G +R ++ + K+ YKLV+LG++ VGKS +V RFV+ +F + Q+STIG
Sbjct: 52 GRERKREGEKGKDKVFHYKLVILGDAFVGKSCIVSRFVKDEFVD-QQSTIG 101
>gi|116182662|ref|XP_001221180.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186256|gb|EAQ93724.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 201
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 101/153 (66%), Gaps = 25/153 (16%)
Query: 81 QTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKEL 139
+T+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKSWVK
Sbjct: 40 KTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVK-- 97
Query: 140 QRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEGEAYAE 196
ELQR A NI+IALAGNK DL T +R +E ++ EAYA+
Sbjct: 98 -------------------ELQRQANENIIIALAGNKLDLVTEQPDKRAIETADAEAYAK 138
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV 229
E GLLF ETSAKTA NV E+F IAKKLP +V
Sbjct: 139 EAGLLFFETSAKTAENVQELFTAIAKKLPLDQV 171
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 24/26 (92%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVR 319
+ Q+KLVLLGESAVGKSS+VLRFV+
Sbjct: 15 RFAQFKLVLLGESAVGKSSIVLRFVK 40
>gi|170084457|ref|XP_001873452.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651004|gb|EDR15244.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 173
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 101/151 (66%), Gaps = 23/151 (15%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LDD T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +A++
Sbjct: 40 AAFLTQTVTLDDQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQTASLEKART 99
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++E LQR A P+IVIAL GNK+DL +RR V E + Y
Sbjct: 100 WIRE---------------------LQRQADPSIVIALCGNKSDL-AARRQVTEEEAKKY 137
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
A+E GL++ ETSAKT V+EIF IAKKLP
Sbjct: 138 ADEEGLMWAETSAKTGEGVSEIFTAIAKKLP 168
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 34/40 (85%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTI
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIAA 41
>gi|347841938|emb|CCD56510.1| similar to ras-related protein rab-5a [Botryotinia fuckeliana]
Length = 221
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 108/178 (60%), Gaps = 34/178 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 38 FVKDQFDDYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 88
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AKSWVK ELQR A NI+I
Sbjct: 89 YRNANCAVVVYDITQAASLDKAKSWVK---------------------ELQRQANENIII 127
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
ALAGNK DL T +R + + YA+E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 128 ALAGNKLDLVTEQPDKRAITTEDASNYAKEAGLLFFETSAKTSENVRELFTAIAKKLP 185
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 35/39 (89%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIG 52
>gi|154312633|ref|XP_001555644.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 237
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 100/154 (64%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 69 AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKS 128
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL T +R + +
Sbjct: 129 WVK---------------------ELQRQANENIIIALAGNKLDLVTEQPDKRAITTEDA 167
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
YA+E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 168 SNYAKEAGLLFFETSAKTSENVRELFTAIAKKLP 201
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHS 339
++ Q+KLVLLGESAVGKSSLVLRFV+ + +E + + + H+
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKPGYDSNREFRMNKDHTADHT 60
>gi|256078265|ref|XP_002575417.1| rab5 [Schistosoma mansoni]
gi|353230408|emb|CCD76579.1| putative rab5 [Schistosoma mansoni]
Length = 179
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/147 (55%), Positives = 102/147 (69%), Gaps = 24/147 (16%)
Query: 76 AAFITQTVCLDD--VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AA++TQT+ L+D T++FEIWDTAGQERYH+LAPMYYR AQAA++VYDITNQ++F RAK
Sbjct: 41 AAYLTQTIVLNDPPATVKFEIWDTAGQERYHSLAPMYYRGAQAAVVVYDITNQNSFERAK 100
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
SW+ ELQ A +T G VIALAGNK DL +R V + E +
Sbjct: 101 SWINELQEKA----NTSG-----------------VIALAGNKVDLE-GQRAVSFEEAQE 138
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEI 220
YA++N LLFMETSAK + NV+E+F I
Sbjct: 139 YADKNRLLFMETSAKISTNVSELFTAI 165
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+KLV+LGESAVGKSS+VLR V+ QF EYQE+TIG
Sbjct: 7 HKLVILGESAVGKSSIVLRLVKCQFSEYQEATIGA 41
>gi|255550727|ref|XP_002516412.1| protein with unknown function [Ricinus communis]
gi|223544447|gb|EEF45967.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 98/146 (67%), Gaps = 22/146 (15%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIVYDITNQ
Sbjct: 36 VEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ 95
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ A N PN+V+ALAGNKADL +R+ V
Sbjct: 96 ASFERAKKWVQELQ--AQGN-------------------PNMVMALAGNKADLLDARK-V 133
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMN 212
E + YA+ENGL FMETSAKTA N
Sbjct: 134 ATEEAQVYAQENGLFFMETSAKTATN 159
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGA 45
>gi|390604100|gb|EIN13491.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 257
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 101/185 (54%), Gaps = 56/185 (30%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA++VYD+T
Sbjct: 49 AAFLTQKCRLEDRVLRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDVTK---------- 98
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
+ +AKSWVKELQR A PNIVIALAGNK DL
Sbjct: 99 -----------ASSLEKAKSWVKELQRQANPNIVIALAGNKVDLVQQPSSSTPAADAEED 147
Query: 180 -------------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEI 220
P S R V E +AYA E GLLF ETSAKT V E+F EI
Sbjct: 148 EADDATATPDADADAESSSPESLRQVPADEAQAYAAEAGLLFFETSAKTGEGVVEMFTEI 207
Query: 221 AKKLP 225
AKK+P
Sbjct: 208 AKKIP 212
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 28/39 (71%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K Q KLVLLGE+AVGKSS+VLRFV F +E TIG
Sbjct: 11 KSVQVKLVLLGEAAVGKSSVVLRFVSNDFQANKEPTIGA 49
>gi|168068031|ref|XP_001785900.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662426|gb|EDQ49283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 203
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 105/153 (68%), Gaps = 22/153 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F++QT+ L D TI+FEIWDTAGQERY +LAP+YYR A AA++VYDITN +TF +A+ W
Sbjct: 67 ASFLSQTINLQDSTIKFEIWDTAGQERYSSLAPLYYRGASAAVVVYDITNPETFLKAQFW 126
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VK ELQ+ P+IV+AL GNKADL S R V E AYA
Sbjct: 127 VK---------------------ELQKHGNPDIVMALVGNKADL-ESEREVSREEALAYA 164
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
E NG+ F+ETSAKTA NVN++F EIAK+LP+ +
Sbjct: 165 ESNGMFFIETSAKTADNVNQLFEEIAKRLPRGQ 197
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 269 MANSNNSNSNGRG-GRIQRPN--DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 325
M S++S + +G GR+Q + D +K + KLVLLG+S VGKS ++LRFVRGQF
Sbjct: 1 MGCSSSSPAAVKGSGRLQTTSQPDVLDSKNLRIKLVLLGDSGVGKSCILLRFVRGQFDPS 60
Query: 326 QESTIGG 332
+ T+G
Sbjct: 61 SKVTVGA 67
>gi|224113085|ref|XP_002316386.1| predicted protein [Populus trichocarpa]
gi|118488888|gb|ABK96253.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222865426|gb|EEF02557.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 114/181 (62%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ I A+F++QT+ L D TI+FEIWDTAGQERY
Sbjct: 48 CIVLRFVRGQFDPTSKVTIG---------ASFLSQTIALQDSTTIKFEIWDTAGQERYAA 98
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A+IVYDIT+ +TF +A+ WVK ELQ+
Sbjct: 99 LAPLYYRGAAVAVIVYDITSPETFNKAQYWVK---------------------ELQKHGS 137
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P+IV+AL GNKADL +R V +G YAE+NG+ F+ETSAKTA N+N++F EIAK+LP
Sbjct: 138 PDIVMALVGNKADL-HEKREVPTQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 196
Query: 226 K 226
+
Sbjct: 197 R 197
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 41/83 (49%), Gaps = 17/83 (20%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
+ NNS S G AK + KLVLLG+S VGKS +VLRFVRGQF +
Sbjct: 15 LGGLNNSESGG----------VADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKV 64
Query: 329 TIGGE-------CQSSHSISFSM 344
TIG Q S +I F +
Sbjct: 65 TIGASFLSQTIALQDSTTIKFEI 87
>gi|393213286|gb|EJC98783.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 209
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 102/154 (66%), Gaps = 23/154 (14%)
Query: 74 FSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRA 132
AAF+TQTV L+D T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +A
Sbjct: 39 IGAAFLTQTVSLEDGSTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKA 98
Query: 133 KSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGE 192
K+W++E LQR A P+IVIAL GNK DL RR V E +
Sbjct: 99 KTWIRE---------------------LQRQADPSIVIALCGNKVDL-EERRQVLQEEAQ 136
Query: 193 AYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
YA+E GL++ ETSAKT + VN+IF E+AKKLP+
Sbjct: 137 NYAKEEGLMWGETSAKTGLGVNDIFTELAKKLPQ 170
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 35/39 (89%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQYQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIG 40
>gi|351699897|gb|EHB02816.1| Ras-related protein Rab-5C [Heterocephalus glaber]
Length = 209
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 92/135 (68%), Gaps = 22/135 (16%)
Query: 100 QERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKE 159
Q H LAPMYYR AQAAI+VYDITN DTF RAK+WVKE
Sbjct: 73 QPGPHCLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKE--------------------- 111
Query: 160 LQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVE 219
LQR A P+IVIALAGNKADL +R VE+ E +AYAE+N LLFMETSAKTAMNVNEIF+
Sbjct: 112 LQRQASPSIVIALAGNKADL-APKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMA 170
Query: 220 IAKKLPKKEVNNGQG 234
IAKKLPK E N G
Sbjct: 171 IAKKLPKNEPQNTAG 185
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIGG
Sbjct: 3 GRGG-AARPNGPAVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGG 56
>gi|170085289|ref|XP_001873868.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651420|gb|EDR15660.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 277
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/230 (41%), Positives = 114/230 (49%), Gaps = 74/230 (32%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA++VYD+T + +AKSW
Sbjct: 68 AAFLTQKCRLEDRILRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDVTKASSLEKAKSW 127
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
VKEL QR A PNIVIALAGNK DL
Sbjct: 128 VKEL---------------------QRQANPNIVIALAGNKVDLVQSSASSSGTSPSLDS 166
Query: 180 --------------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVE 219
P S R V E +AYA E GLLF ETSAKT + +IF E
Sbjct: 167 EDEADDATATPGETPGSSGDPESLRQVPREEAQAYASEAGLLFFETSAKTGEGIVDIFTE 226
Query: 220 IAKKLPKKEV---------NNGQGGRRLVETAE--------APKTSNCCN 252
IAKK+P + + G G R T + APK + CN
Sbjct: 227 IAKKIPIEHILAATRGSSGRPGASGNRTEGTRQQGVNLDDNAPKPKDACN 276
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 29/38 (76%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
K Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 30 KSVQVKLVLLGEAAVGKSSVVLRFVSNEFQPNKEPTIG 67
>gi|156838802|ref|XP_001643100.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156113693|gb|EDO15242.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 211
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 104/157 (66%), Gaps = 23/157 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V +DD T++FEIWDTAGQER+ +LAPMYYRNAQAA++VYD++ +F +A+ W
Sbjct: 42 AAFLTQRVNIDDHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVSKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--PTSRRCVEYSEGEA 193
VKELQ RA S +I+IALAGNK D+ R V EG+
Sbjct: 102 VKELQE----------RASS-----------DIIIALAGNKVDIVEDGGERKVATEEGQK 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN 230
A+E GLLF ETSAKT NVNE+F+ I +K+P K+ N
Sbjct: 141 LADEEGLLFFETSAKTGQNVNEVFLAIGEKIPIKKPN 177
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ + KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 3 SNVTSVKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGA 42
>gi|116781044|gb|ABK21941.1| unknown [Picea sitchensis]
gi|224286274|gb|ACN40846.1| unknown [Picea sitchensis]
Length = 202
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 103/152 (67%), Gaps = 23/152 (15%)
Query: 76 AAFITQTVCL-DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
A+F++QT+ L D T++FEIWDTAGQERY +LAP+YYR A AA+IVYDIT +TF +A+
Sbjct: 67 ASFLSQTIALQDSTTVKFEIWDTAGQERYASLAPLYYRGASAAVIVYDITCMETFHKAQF 126
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVK ELQ+ PNIV+AL GNKADL S R V + +AY
Sbjct: 127 WVK---------------------ELQKHGNPNIVMALVGNKADLEES-RSVGHDVAQAY 164
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
A+ NG+ +ETSAKTA N+N++F EIAK+LP+
Sbjct: 165 ADANGMFLIETSAKTADNINQLFEEIAKRLPR 196
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ +K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 26 SDSKNLRIKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGA 67
>gi|388518999|gb|AFK47561.1| unknown [Medicago truncatula]
Length = 199
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 114/184 (61%), Gaps = 32/184 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L D T++FEIWDTAGQERY
Sbjct: 46 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTIALQDSTTVKFEIWDTAGQERYAA 96
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A+I YDIT+ ++F +A+ WVK ELQ+
Sbjct: 97 LAPLYYRGAAVAVIAYDITSPESFSKAQYWVK---------------------ELQKHGS 135
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P+IV+AL GNKADL +R V +G YAE+NG+ F+ETSAKTA N+NE+F EIAK+LP
Sbjct: 136 PDIVMALVGNKADL-QEKREVAVEDGMDYAEKNGMFFIETSAKTADNINELFEEIAKRLP 194
Query: 226 KKEV 229
+ V
Sbjct: 195 RPSV 198
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE-------C 334
GR N AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 16 GRPSPENGGGDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIAL 75
Query: 335 QSSHSISFSM 344
Q S ++ F +
Sbjct: 76 QDSTTVKFEI 85
>gi|389751301|gb|EIM92374.1| GTP-binding protein RAB5 [Stereum hirsutum FP-91666 SS1]
Length = 208
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 102/153 (66%), Gaps = 23/153 (15%)
Query: 74 FSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRA 132
AAF+TQTV LDD +T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +A
Sbjct: 39 IGAAFLTQTVNLDDGMTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKA 98
Query: 133 KSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGE 192
++W++E LQR A P+IVIAL GNK+DL +RR V E +
Sbjct: 99 RNWIRE---------------------LQRQADPSIVIALCGNKSDL-AARRQVTQEEAQ 136
Query: 193 AYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
YAEE GL++ ETSAK+ V++IF IAKKLP
Sbjct: 137 KYAEEEGLMWAETSAKSGEGVSDIFTAIAKKLP 169
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 35/39 (89%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIG 40
>gi|19114819|ref|NP_593907.1| GTPase Ypt5 [Schizosaccharomyces pombe 972h-]
gi|549812|sp|P36586.1|YPT5_SCHPO RecName: Full=GTP-binding protein ypt5
gi|396079|emb|CAA80223.1| ypt5 protein [Schizosaccharomyces pombe]
gi|2389005|emb|CAB11737.1| GTPase Ypt5 [Schizosaccharomyces pombe]
Length = 211
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 115/183 (62%), Gaps = 27/183 (14%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ +D+ T ++ EIWDTAGQERY +LAPMYYRNA AI+VYDIT + +AKS
Sbjct: 49 AAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKS 108
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W+ KELQR AP IVIALAGNK DL RR VE ++ EAY
Sbjct: 109 WI---------------------KELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAY 147
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP-KKEVNNGQG----GRRLVETAEAPKTSN 249
A E LLF ETSAKTA NVNE+F IAKKLP + ++N +G G L E A + S
Sbjct: 148 AAEANLLFFETSAKTAENVNELFTAIAKKLPLEDKLNQARGAVNRGVNLSEARPAAQPSG 207
Query: 250 CCN 252
C+
Sbjct: 208 SCS 210
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 31/34 (91%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+SAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGA 49
>gi|156095051|ref|XP_001613561.1| small GTPase Rab5c [Plasmodium vivax Sal-1]
gi|148802435|gb|EDL43834.1| small GTPase Rab5c, putative [Plasmodium vivax]
Length = 214
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 114/187 (60%), Gaps = 28/187 (14%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
FY Y S AAF+TQ + + + TI+FEIWDTAGQERY +LAPMYYR A AA+IVYDITN
Sbjct: 52 FYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQERYRSLAPMYYRGASAAVIVYDITN 111
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F A K W+ EL+ + +I+IALAGNK DL + R
Sbjct: 112 KKSFEGA---------------------KGWIHELKSVHSNDIIIALAGNKKDLEKN-RV 149
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP-KKEVNNGQGGRRLVETAEA 244
V+ E++A N +LF+ETSAKT NVNE+F+ IAKKLP K+ + G ++ T EA
Sbjct: 150 VDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLPLHKKEQDKFSGIQINNTEEA 209
Query: 245 PKTSNCC 251
K CC
Sbjct: 210 KKK--CC 214
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K+ KLVLLG+++VGKS +V+RF + +F+EYQESTIG
Sbjct: 24 KVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGA 62
>gi|225718462|gb|ACO15077.1| Ras-related protein Rab-5C [Caligus clemensi]
Length = 163
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 100/154 (64%), Gaps = 26/154 (16%)
Query: 105 TLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMA 164
TL P+ YR AQAAI+VYD+TNQD+F RAK+ WVKELQR A
Sbjct: 32 TLFPLNYRGAQAAIVVYDVTNQDSFTRAKN---------------------WVKELQRQA 70
Query: 165 PPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
PNIVIALAGNK DL T++R V Y E + YAEENGLLFMETSAKTA+NVN+IF+EIAKKL
Sbjct: 71 SPNIVIALAGNKNDL-TTKRLVMYEEAQTYAEENGLLFMETSAKTALNVNDIFMEIAKKL 129
Query: 225 PK--KEVNNGQGGRRLVE--TAEAPKTSNCCNTQ 254
PK N+ GG RL AE+ CC Q
Sbjct: 130 PKDGDSGNSQSGGHRLTNGPNAESRSGFQCCKFQ 163
>gi|356576246|ref|XP_003556244.1| PREDICTED: ras-related protein RABF1 [Glycine max]
Length = 200
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 115/185 (62%), Gaps = 32/185 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L D T++FEIWDTAGQERY
Sbjct: 47 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTIALQDSTTVKFEIWDTAGQERYAA 97
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A+IVYDIT+ ++F +A+ WVK ELQ+
Sbjct: 98 LAPLYYRGAAVAVIVYDITSPESFSKAQYWVK---------------------ELQKHGS 136
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P+IV+AL GNKADL +R V +G YAE+N + F+ETSAKTA N+NE+F EIAK+LP
Sbjct: 137 PDIVMALVGNKADL-LEKREVAVQDGTDYAEKNDMFFIETSAKTADNINELFEEIAKRLP 195
Query: 226 KKEVN 230
+ V+
Sbjct: 196 RPSVS 200
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 11/73 (15%)
Query: 283 RIQRPNDQT----QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE----- 333
++ RPN + AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 14 QLGRPNSENGGGQDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQT 73
Query: 334 --CQSSHSISFSM 344
Q S ++ F +
Sbjct: 74 IALQDSTTVKFEI 86
>gi|363753442|ref|XP_003646937.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890573|gb|AET40120.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
Length = 209
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V + + TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT +F +A+ W
Sbjct: 42 AAFLTQRVNMGNQTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS--RRCVEYSEGEA 193
VKEL A +I+IAL GNK DL S R V E E+
Sbjct: 102 ---------------------VKELHEQASKSIIIALVGNKLDLLESDEERKVAREEAES 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK--EVNNGQG 234
A+E GLLF ETSAKT NVNE+F+ I +K+P K EV NG G
Sbjct: 141 LAQEEGLLFFETSAKTGDNVNEVFLGIGEKIPLKQQEVQNGNG 183
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+ + KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 3 SNVASIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIG 41
>gi|149054245|gb|EDM06062.1| rCG32615, isoform CRA_b [Rattus norvegicus]
Length = 128
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 97/150 (64%), Gaps = 28/150 (18%)
Query: 109 MYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNI 168
MYYR AQAAI+VYDITN DTF RAK+WVKELQR A PNI
Sbjct: 1 MYYRGAQAAIVVYDITN---------------------TDTFARAKNWVKELQRQASPNI 39
Query: 169 VIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
VIALAGNKADL S+R VE+ E +AYA++N LLFMETSAKTAMNVNEIF+ IAKKLPK E
Sbjct: 40 VIALAGNKADL-ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 98
Query: 229 VNNGQG------GRRLVETAEAPKTSNCCN 252
N G G L E+ A ++ C N
Sbjct: 99 PQNAAGAPGRNRGVDLQESNPASRSQCCSN 128
>gi|222612895|gb|EEE51027.1| hypothetical protein OsJ_31672 [Oryza sativa Japonica Group]
Length = 264
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 116/181 (64%), Gaps = 18/181 (9%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L+D T++FEIWDTAGQERY
Sbjct: 97 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTLALEDSTTVKFEIWDTAGQERYAA 147
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A AAI+VYDIT+ ++F +A+ WVK +D S ELQ+
Sbjct: 148 LAPLYYRGAGAAIVVYDITSSESFNKAQYWVKMY-------VDHGLHLTSINHELQKHGS 200
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P++++AL GNKADL R V + + YAE N + F+ETSAKTA N+N++F EIAK+LP
Sbjct: 201 PDMIMALVGNKADL-HDNRSVSSQDAQEYAERNTMFFIETSAKTADNINQLFEEIAKRLP 259
Query: 226 K 226
+
Sbjct: 260 R 260
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 275 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+N+ G G I N T K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 60 ANNAGGVGTISNENSGTDLKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 117
>gi|390604985|gb|EIN14376.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 208
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 99/151 (65%), Gaps = 23/151 (15%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LDD T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +A++
Sbjct: 41 AAFLTQTVTLDDQATVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQTASLEKART 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++E LQR A P+IVIAL GNK DL +RR V E + Y
Sbjct: 101 WIRE---------------------LQRQADPSIVIALCGNKIDL-AARRQVTQEEAQKY 138
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
AEE GLL+ E SAKT V+++F IAKKLP
Sbjct: 139 AEEEGLLWFEASAKTGEGVSDVFTAIAKKLP 169
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|218184610|gb|EEC67037.1| hypothetical protein OsI_33775 [Oryza sativa Indica Group]
Length = 263
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 116/181 (64%), Gaps = 18/181 (9%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L+D T++FEIWDTAGQERY
Sbjct: 96 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTLALEDSTTVKFEIWDTAGQERYAA 146
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A AAI+VYDIT+ ++F +A+ WVK +D S ELQ+
Sbjct: 147 LAPLYYRGAGAAIVVYDITSSESFNKAQYWVKMY-------VDHGLHLTSINHELQKHGS 199
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P++++AL GNKADL R V + + YAE N + F+ETSAKTA N+N++F EIAK+LP
Sbjct: 200 PDMIMALVGNKADL-HDNRSVSSQDAQEYAERNTMFFIETSAKTADNINQLFEEIAKRLP 258
Query: 226 K 226
+
Sbjct: 259 R 259
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 275 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+N+ G G I N T K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 59 ANNAGGVGTISNENSGTDPKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 116
>gi|3153154|emb|CAA06922.1| small GTP-binding protein [Mesembryanthemum crystallinum]
Length = 201
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 114/181 (62%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L D T++FEIWDTAGQERY
Sbjct: 48 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTIALQDSSTVKFEIWDTAGQERYAA 98
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A+IVYDIT+ ++F +A+ WVK ELQ+
Sbjct: 99 LAPLYYRGAAVAVIVYDITSPESFTKAQYWVK---------------------ELQKHGS 137
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P+I++AL GNKADL RR V +G YAE+NG+ F+ETSAKTA N+N++F EIAK+LP
Sbjct: 138 PDIIMALVGNKADL-QERREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 196
Query: 226 K 226
+
Sbjct: 197 R 197
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE-------CQSSHSISFS 343
+ AK + KLVLLG+S VGKS +VLRFVRGQF + T+G Q S ++ F
Sbjct: 27 SDAKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSSTVKFE 86
Query: 344 M 344
+
Sbjct: 87 I 87
>gi|1370180|emb|CAA98167.1| RAB5B [Lotus japonicus]
gi|388498868|gb|AFK37500.1| unknown [Lotus japonicus]
Length = 200
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 114/181 (62%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L D T++FEIWDTAGQERY
Sbjct: 47 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTIALQDSTTVKFEIWDTAGQERYAA 97
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A+IVYDIT+ ++F +A+ WV KELQ+
Sbjct: 98 LAPLYYRGAAVAVIVYDITSPESFSKAQYWV---------------------KELQKHGN 136
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P+IV+AL GNKADL +R V +G YAE+NG+ F+ETSAKTA N+NE+F EIAK+LP
Sbjct: 137 PDIVMALVGNKADL-LEKREVAVQDGIDYAEKNGMFFIETSAKTADNINELFEEIAKRLP 195
Query: 226 K 226
+
Sbjct: 196 R 196
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 292 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE-------CQSSHSISFSM 344
AK + KLVLLG+S VGKS +VLRFVRGQF + T+G Q S ++ F +
Sbjct: 27 DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEI 86
>gi|392597256|gb|EIW86578.1| GTP-binding protein ypt5 [Coniophora puteana RWD-64-598 SS2]
Length = 259
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 100/188 (53%), Gaps = 57/188 (30%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA++VYD+T + +AK
Sbjct: 47 IGAAFLTQKCRLEDRVLRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDVTKGSSLEKAK 106
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-------------- 179
SWVKEL QR A PNIVIALAGNK DL
Sbjct: 107 SWVKEL---------------------QRQANPNIVIALAGNKVDLVQSSSSSGNTSTSE 145
Query: 180 ----------------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIF 217
P S R V E AYA E GLLF ETSAKT + EIF
Sbjct: 146 SEDEADDATATPGETPGSPNGEPESLRQVSREEAHAYATEAGLLFFETSAKTGEGIVEIF 205
Query: 218 VEIAKKLP 225
EIAKK+P
Sbjct: 206 TEIAKKIP 213
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 14 QVKLVLLGEAAVGKSSVVLRFVSNEFQPNKEPTIG 48
>gi|367007916|ref|XP_003688687.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS 4417]
gi|357526997|emb|CCE66253.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS 4417]
Length = 213
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 102/168 (60%), Gaps = 30/168 (17%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V +DD TI+FEIWDTAGQER+ +LAPMYYRNAQAA+IVYD+T +F +A+ W
Sbjct: 42 AAFLTQRVNIDDHTIKFEIWDTAGQERFASLAPMYYRNAQAALIVYDVTKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL----PTSRRCVEYSEG 191
VKEL A +IVIALAGNK DL + R V EG
Sbjct: 102 ---------------------VKELHEQASGDIVIALAGNKVDLIEENGENERKVATEEG 140
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-----NGQG 234
+ A+E LLF ETSAKT NVNEIF+ + K+P K N NG G
Sbjct: 141 QKLADEENLLFFETSAKTGYNVNEIFLAVGDKIPLKRPNDNANENGSG 188
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS------SHSISFSM 344
+ + KLVLLGE+AVGKSS+V+RFV F E +E TIG + H+I F +
Sbjct: 3 SNVASVKLVLLGEAAVGKSSIVVRFVSNDFSENKEPTIGAAFLTQRVNIDDHTIKFEI 60
>gi|321262867|ref|XP_003196152.1| GTPase [Cryptococcus gattii WM276]
gi|317462627|gb|ADV24365.1| GTPase, putative [Cryptococcus gattii WM276]
Length = 199
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 113/184 (61%), Gaps = 32/184 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQ+V LD+ TI+FEIWDTAGQERY +LAP+Y+RN+ AA+IVYDIT Q +F +AKS
Sbjct: 40 AAFLTQSVNLDESTTIKFEIWDTAGQERYKSLAPIYFRNSNAAVIVYDIT-QTSFEKAKS 98
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WV+E LQR A P+IVI L GNK D+ + R+ GE Y
Sbjct: 99 WVRE---------------------LQRQADPSIVIMLVGNKTDMDSQRKT-SREIGEQY 136
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP------KKEVNNGQGGRRLVETAEAPKTS 248
A+E GLLF E SAKT V E+F+EIAKKLP + + G+G + V E T+
Sbjct: 137 AKEEGLLFAEASAKTGEGVEELFMEIAKKLPLAPPPQRGQATGGKGVK--VSGQEDSATA 194
Query: 249 NCCN 252
+ C
Sbjct: 195 SACT 198
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG------ECQSSHSISFSM-- 344
A+ +KLVLLGESAVGKSSLVLRFVR +F +++ESTI S +I F +
Sbjct: 2 ARTTSFKLVLLGESAVGKSSLVLRFVRNEFSDFRESTIAAFLTQSVNLDESTTIKFEIWD 61
Query: 345 -PTKNRLNNNVPITF 358
+ R + PI F
Sbjct: 62 TAGQERYKSLAPIYF 76
>gi|393240302|gb|EJD47829.1| GTP-binding protein ypt5 [Auricularia delicata TFB-10046 SS5]
Length = 255
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 101/186 (54%), Gaps = 57/186 (30%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA++VYD+T + +AKSW
Sbjct: 48 AAFLTQKCRLEDRVLRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDVTKAASLDKAKSW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
VKE LQR A P+IVIALAGNK DL
Sbjct: 108 VKE---------------------LQRQANPHIVIALAGNKVDLVAPSASSSSGEDAAAS 146
Query: 180 --------------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVE 219
P S R V E +AYA E GLLF ETSAKT + E+F E
Sbjct: 147 EDEPDDATATPGELAQAAGGPESLRAVPRDEAQAYASEAGLLFFETSAKTGEGIVELFTE 206
Query: 220 IAKKLP 225
IAKK+P
Sbjct: 207 IAKKIP 212
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 30/42 (71%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
T K Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 7 TADKSIQVKLVLLGEAAVGKSSVVLRFVSNEFQANKEPTIGA 48
>gi|388851463|emb|CCF54865.1| probable VPS21-Rab5-like GTPase involved in vacuolar protein
sorting [Ustilago hordei]
Length = 270
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 100/181 (55%), Gaps = 52/181 (28%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L+D I+FEIWDTAGQER+H+LAPMYYRNAQA+ ++YD+T +F +AKSW
Sbjct: 61 AAFLTQKCRLEDRLIKFEIWDTAGQERFHSLAPMYYRNAQASAVIYDVTKASSFEKAKSW 120
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
VKEL QR A PNIVIAL GNK DL
Sbjct: 121 VKEL---------------------QRQANPNIVIALVGNKIDLLSETSSSTSTAAEEND 159
Query: 180 ---------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
S R V E EAYA+E GLLF ETSAKT V E+F EIAKK+
Sbjct: 160 DDDETVTATGEAAASGESLRAVPKDEAEAYAKEAGLLFFETSAKTGEGVVEVFTEIAKKI 219
Query: 225 P 225
P
Sbjct: 220 P 220
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 30/38 (78%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
K Q KLVLLGE+AVGKSS+VLRFV+ F E +E TIG
Sbjct: 23 KPFQTKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIG 60
>gi|357114010|ref|XP_003558794.1| PREDICTED: ras-related protein RABF1-like [Brachypodium distachyon]
Length = 199
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 113/181 (62%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVTI-RFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L+D TI +FEIWDTAGQERY
Sbjct: 46 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTLALEDSTIVKFEIWDTAGQERYAA 96
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A AAI+VYDIT+ ++F +A+ WV KELQ+
Sbjct: 97 LAPLYYRGAAAAIVVYDITSPESFKKAQYWV---------------------KELQKHGN 135
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P I++ L GNKADL S R V E + YAE+N + FMETSAKTA N+N++F EIAK+LP
Sbjct: 136 PGIIMVLVGNKADLHES-RSVPTQEAQEYAEKNSMFFMETSAKTADNINQLFEEIAKRLP 194
Query: 226 K 226
+
Sbjct: 195 R 195
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 262 SSIHILTMANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQ 321
SS+ + NN N N T + + KLVLLG+S VGKS +VLRFVRGQ
Sbjct: 5 SSVPARSTGGLNNINDNSTA---------TDSNELRAKLVLLGDSGVGKSCIVLRFVRGQ 55
Query: 322 FHEYQESTIGG 332
F + T+G
Sbjct: 56 FDPTSKVTVGA 66
>gi|402222754|gb|EJU02820.1| GTP-binding protein RAB5 [Dacryopinax sp. DJM-731 SS1]
Length = 208
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 109/189 (57%), Gaps = 34/189 (17%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV L+D T++FEIWDTAGQERY +LAPMYYR+A AI VYDIT + +AKS
Sbjct: 41 AAFLTQTVQLEDGTTVKFEIWDTAGQERYKSLAPMYYRSAACAICVYDITQSASLEKAKS 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++E LQR A P+IVIAL GNK+DL +RR V E + +
Sbjct: 101 WIRE---------------------LQRQADPSIVIALCGNKSDL-AARRQVSQEEAQKF 138
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEA---------- 244
AEE GL++ ETSAKT VNEIF IA KLP+ Q G + A A
Sbjct: 139 AEEEGLMWCETSAKTGEGVNEIFDRIAHKLPEVAPLQAQRGTAAAKPAGARSVDLNKGPA 198
Query: 245 -PKTSNCCN 252
P T CN
Sbjct: 199 GPGTPESCN 207
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|448114201|ref|XP_004202515.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359383383|emb|CCE79299.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 99/158 (62%), Gaps = 28/158 (17%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + + TI++EIWDTAGQER+ +LAPMYYRNAQAA++VYDIT +F +A+ W
Sbjct: 44 AAFLTQKCTIGERTIKYEIWDTAGQERFSSLAPMYYRNAQAALVVYDITKAASFIKARRW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR-------RCVEY 188
VKELQ A +I IAL GNK DL S R V
Sbjct: 104 ---------------------VKELQDQASKDITIALVGNKYDLVESDKDGEDGLRAVSI 142
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
EG+ AEE GLLF ETSAKTA NVNE+F++I KK+P+
Sbjct: 143 EEGKKLAEEEGLLFFETSAKTAHNVNEVFIDIGKKIPE 180
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 28/37 (75%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+ KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 7 VTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIG 43
>gi|242093978|ref|XP_002437479.1| hypothetical protein SORBIDRAFT_10g027890 [Sorghum bicolor]
gi|241915702|gb|EER88846.1| hypothetical protein SORBIDRAFT_10g027890 [Sorghum bicolor]
Length = 210
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 100/159 (62%), Gaps = 21/159 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF +Q + LD+ T++ +IWDTAGQERYH+LAPMYYR A AAI+V+DIT+ D++ RAK W
Sbjct: 52 AAFFSQVLSLDEATVKLDIWDTAGQERYHSLAPMYYRGAAAAIVVFDITSTDSYVRAKRW 111
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V ELQR GR P++V+AL NK DL RR V E YA
Sbjct: 112 VDELQRQ--------GR------------NPHLVMALVANKVDLQ-ERRQVGTQEAMDYA 150
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
E NGL F ETSAKTA NV E+F E+A++L K N G
Sbjct: 151 EANGLFFTETSAKTAQNVTELFYELAERLVKLRPNRPAG 189
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 9/47 (19%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHE---------YQESTIGG 332
I Q KLVLLG+ GK+S+V+RF +G ++E +QESTIG
Sbjct: 6 IIQAKLVLLGDLGAGKTSIVVRFAKGLYYECQARTTTSFHQESTIGA 52
>gi|296413464|ref|XP_002836433.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630252|emb|CAZ80624.1| unnamed protein product [Tuber melanosporum]
Length = 218
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 114/189 (60%), Gaps = 33/189 (17%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T I+FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AK+
Sbjct: 50 AAFLTQTIALDETTTIKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKA 109
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKAD--LPT---SRRCVEYS 189
WVK ELQR A NIVIALAGNK D LPT S+R VE +
Sbjct: 110 WVK---------------------ELQRQANENIVIALAGNKLDLALPTGSPSKRAVETA 148
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL------PKKEVNNGQGGRRLVETAE 243
E EAYA E GLLF ETSAKTA NV E+F IAKKL P+ G G R V +
Sbjct: 149 EAEAYAREAGLLFFETSAKTAENVKELFTAIAKKLPLDQQGPRGTTRTGAAGGRGVNLSG 208
Query: 244 APKTSNCCN 252
A CN
Sbjct: 209 ANAAQQGCN 217
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
Query: 286 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
R + Q+Q + Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 5 RASTQSQ-RFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIG 49
>gi|225448984|ref|XP_002270699.1| PREDICTED: ras-related protein RABF1 [Vitis vinifera]
gi|147864853|emb|CAN79376.1| hypothetical protein VITISV_009584 [Vitis vinifera]
gi|296085986|emb|CBI31427.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 114/181 (62%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L D T++FEIWDTAGQERY
Sbjct: 47 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTIALQDSTTVKFEIWDTAGQERYAA 97
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A++VYDIT+ ++F +A+ WVK ELQ+
Sbjct: 98 LAPLYYRGAAVAVVVYDITSPESFNKAQYWVK---------------------ELQKHGS 136
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P+IV+AL GNKADL +R V +G YAE+NG+ F+ETSAKTA N+N++F EIAK+LP
Sbjct: 137 PDIVMALVGNKADLHENRE-VPVQDGIDYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 195
Query: 226 K 226
+
Sbjct: 196 R 196
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 274 NSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE 333
+ NS GG AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 9 DRNSGRLGGLNAENGGAPDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGAS 68
Query: 334 -------CQSSHSISFSM 344
Q S ++ F +
Sbjct: 69 FLSQTIALQDSTTVKFEI 86
>gi|343426796|emb|CBQ70324.1| probable VPS21-Rab5-like GTPase involved in vacuolar protein
sorting [Sporisorium reilianum SRZ2]
Length = 268
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 99/183 (54%), Gaps = 54/183 (29%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L+D I+FEIWDTAGQER+H+LAPMYYRNAQA+ ++YD+T +F +AKSW
Sbjct: 59 AAFLTQKCRLEDRLIKFEIWDTAGQERFHSLAPMYYRNAQASAVIYDVTKASSFEKAKSW 118
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
VKEL QR A PNIVIAL GNK DL
Sbjct: 119 VKEL---------------------QRQANPNIVIALVGNKIDLLKESSTSSAAADEAEE 157
Query: 180 -----------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAK 222
S R V E EAYA E GLLF ETSAKT V E+F EIAK
Sbjct: 158 DGDDDDETATTTPEASAGDSLRAVPKDEAEAYAREAGLLFFETSAKTGEGVVEVFTEIAK 217
Query: 223 KLP 225
K+P
Sbjct: 218 KIP 220
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 30/39 (76%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K Q KLVLLGE+AVGKSS+VLRFV+ F E +E TIG
Sbjct: 21 KPYQTKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGA 59
>gi|68070427|ref|XP_677125.1| GTP binding protein [Plasmodium berghei strain ANKA]
gi|56497115|emb|CAH96057.1| P. falciparum GTP binding protein RAB5, putative [Plasmodium
berghei]
Length = 153
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 112/177 (63%), Gaps = 25/177 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + + + TI+FEIWDTAGQERY +LAPMYYR A AA+IVYDITN+ +F A
Sbjct: 1 AAFMTQLIDIGECTIKFEIWDTAGQERYRSLAPMYYRGAAAAVIVYDITNKKSFEGA--- 57
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
K W+ EL+ + +IVIALAGNK DL + R ++ E++A
Sbjct: 58 ------------------KGWIHELKSVHSNDIVIALAGNKCDLEKN-RVIDKELAESFA 98
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQGGRRLVETAEAPKTSNCC 251
N +LF+ETSAKT NVN++F++IAKKLP+ K+ + GG ++ T E K CC
Sbjct: 99 NSNNILFIETSAKTGTNVNDLFLKIAKKLPRNKKDKDTYGGIQINNTEETSK--KCC 153
>gi|410074687|ref|XP_003954926.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
gi|372461508|emb|CCF55791.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
Length = 207
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 113/190 (59%), Gaps = 33/190 (17%)
Query: 76 AAFITQTVCLDD----VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGR 131
AAF++QT+ L+D V ++FEIWDTAGQERY +LAPMYYRNA AA++VYDIT D+ +
Sbjct: 38 AAFLSQTIKLNDNGKEVIVKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITELDSLNK 97
Query: 132 AKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEY 188
AK+WV+EL+ ++ NIVI L GNK D+ +S+R V
Sbjct: 98 AKTWVEELK--------------------NKVGDDNIVIYLVGNKLDVCEKDSSKRLVSL 137
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL---PKKEVN---NGQGGRRLVETA 242
+ YA+E GLLF+ETSAKT N+ E F EI +KL K EVN +G G +
Sbjct: 138 EGAKEYAKEQGLLFIETSAKTGANIKETFQEIGEKLYDIKKTEVNTDLDGNTGEIEISKP 197
Query: 243 EAPKTSNCCN 252
T++CC+
Sbjct: 198 STNDTTSCCS 207
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLG+S+VGKSS+V RFV+ F + +ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVNRFVKDSFEDLRESTIGA 38
>gi|10880926|gb|AAG24438.1|AF304518_1 small GTP-binding protein RAB5B [Oryza sativa]
gi|5931625|dbj|BAA84717.1| rab5B [Oryza sativa Japonica Group]
Length = 199
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 104/152 (68%), Gaps = 23/152 (15%)
Query: 76 AAFITQTVCLDDVTI-RFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
A+F++QT+ L+D TI +FEIWDTAGQERY LAP+YYR A AA++VYDIT+ ++F +A+
Sbjct: 66 ASFLSQTLALEDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAVVVYDITSPESFSKAQY 125
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVK ELQ+ P+I++ L GNKADL +R V E + Y
Sbjct: 126 WVK---------------------ELQKHGSPDIIMVLVGNKADLHKNRH-VSSQEAQEY 163
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
AE+N ++F+ETSAKTA N+N++F EIAK+LP+
Sbjct: 164 AEKNNMVFIETSAKTADNINQVFEEIAKRLPR 195
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 275 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ S G I N T +K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 9 ARSTGGLNNISNDNSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 66
>gi|115450775|ref|NP_001048988.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|11992279|gb|AAG42497.1|AF323991_1 small GTP-binding protein RAB5B [Oryza sativa Indica Group]
gi|108706223|gb|ABF94018.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113547459|dbj|BAF10902.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|215740565|dbj|BAG97221.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768306|dbj|BAH00535.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192105|gb|EEC74532.1| hypothetical protein OsI_10050 [Oryza sativa Indica Group]
gi|222624202|gb|EEE58334.1| hypothetical protein OsJ_09439 [Oryza sativa Japonica Group]
Length = 199
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 104/152 (68%), Gaps = 23/152 (15%)
Query: 76 AAFITQTVCLDDVTI-RFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
A+F++QT+ L+D TI +FEIWDTAGQERY LAP+YYR A AA++VYDIT+ ++F +A+
Sbjct: 66 ASFLSQTLALEDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAVVVYDITSPESFSKAQY 125
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVK ELQ+ P+I++ L GNKADL +R V E + Y
Sbjct: 126 WVK---------------------ELQKHGSPDIIMVLVGNKADLHENRH-VSSQEAQEY 163
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
AE+N ++F+ETSAKTA N+N++F EIAK+LP+
Sbjct: 164 AEKNNMVFIETSAKTADNINQVFEEIAKRLPR 195
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 275 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ S G I N T +K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 9 ARSTGGLNNISNDNSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 66
>gi|119581212|gb|EAW60808.1| RAB5C, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 165
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/113 (66%), Positives = 83/113 (73%), Gaps = 22/113 (19%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DTF RAK+W
Sbjct: 56 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNW 115
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
VKEL QR A PNIVIALAGNKADL S+R VE+
Sbjct: 116 VKEL---------------------QRQASPNIVIALAGNKADL-ASKRAVEF 146
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|384496634|gb|EIE87125.1| hypothetical protein RO3G_11836 [Rhizopus delemar RA 99-880]
Length = 234
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 98/161 (60%), Gaps = 32/161 (19%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+ Q D +I+FEIWDTAGQER+H+LAPMYYRN+QAAI+VYDIT T +AKSW
Sbjct: 56 AAFLNQKCNFKDRSIKFEIWDTAGQERFHSLAPMYYRNSQAAIVVYDITKAATLDKAKSW 115
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-----------PTSRR 184
VKELQR A N D IVIAL GNK DL R
Sbjct: 116 VKELQRQA--NTD-------------------IVIALVGNKLDLVEGEDGEPLEDEEHER 154
Query: 185 CVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
V + +AYA+E GLLF ETSAK+A NV+ +F IA+K+P
Sbjct: 155 EVSKEDAQAYADEAGLLFFETSAKSAQNVDNVFSSIAQKIP 195
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 31/42 (73%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
T K+ KLVLLGESAVGKSS+VLRFV Q+ E +E TIG
Sbjct: 15 TPGKMKNVKLVLLGESAVGKSSIVLRFVDRQYVENREPTIGA 56
>gi|393218694|gb|EJD04182.1| GTP-binding protein ypt5 [Fomitiporia mediterranea MF3/22]
Length = 252
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 107/204 (52%), Gaps = 62/204 (30%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA++VYDIT + +AK
Sbjct: 47 IGAAFLTQKCRLEDRVLRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDITKMASLEKAK 106
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--PTSR-------- 183
SWVKEL QR A PNIVIALAGNK DL P S
Sbjct: 107 SWVKEL---------------------QRQANPNIVIALAGNKLDLVQPKSPATGGSSDA 145
Query: 184 ----------------------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIA 221
R V E E YA+E GLLF ETSAKT + E+F EIA
Sbjct: 146 EDEPDDATATPGEAVAAESETLRQVPTDEAEMYAKEAGLLFFETSAKTGEGIVELFTEIA 205
Query: 222 KKLPKKEV---------NNGQGGR 236
KK+P + + N G GR
Sbjct: 206 KKIPIEHILASTRGAGRNGGPAGR 229
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 29/38 (76%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
K Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 11 KSVQVKLVLLGEAAVGKSSIVLRFVSNEFQPNKEPTIG 48
>gi|302780591|ref|XP_002972070.1| rab family GTPase [Selaginella moellendorffii]
gi|300160369|gb|EFJ26987.1| rab family GTPase [Selaginella moellendorffii]
Length = 205
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 101/152 (66%), Gaps = 23/152 (15%)
Query: 76 AAFITQTVCL-DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
A+F++QT+ L D T++FEIWDTAGQERY +LAP+YYR A AA++VYD+T++++F +A+
Sbjct: 66 ASFLSQTIALQDSSTVKFEIWDTAGQERYASLAPLYYRGASAAVVVYDLTSKESFQKAQY 125
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W VKELQ+ A IV+AL GNKADL + R V E AY
Sbjct: 126 W---------------------VKELQKHANAGIVLALVGNKADL-DNLRTVSTDEARAY 163
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
AE N + F E SAKTA N+NE+F EIAK+LP+
Sbjct: 164 AESNSMFFTEASAKTAGNINEVFEEIAKRLPR 195
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 288 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE-------CQSSHSI 340
N K + KLVLLG+S VGKS +VLRFVRGQF + T+G Q S ++
Sbjct: 22 NGSQDTKHLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTIALQDSSTV 81
Query: 341 SFSM 344
F +
Sbjct: 82 KFEI 85
>gi|237842853|ref|XP_002370724.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211968388|gb|EEB03584.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
Length = 243
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 110/188 (58%), Gaps = 28/188 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF TQ + +D T++FEIWDTAGQER+ +LAPMYYR A AAI+VYD +N +F RA
Sbjct: 75 AAFFTQALQVDGRTVKFEIWDTAGQERFSSLAPMYYRGAAAAIVVYDQSNMASFDRA--- 131
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
+ WV++LQ NIVIALA NK DLP + V+ G YA
Sbjct: 132 ------------------QVWVQQLQLSGNSNIVIALAANKMDLP--HKQVDLHLGRQYA 171
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGR----RLVETAEAPKTSNC 250
EENGLLF+ETSAKT NV ++F IA++LP+K V G GG +L + + +
Sbjct: 172 EENGLLFIETSAKTGQNVQQLFSMIARRLPEKPVGAQGLGGGVHTIKLTDEPAVQRQAGG 231
Query: 251 CNTQFVQC 258
++F C
Sbjct: 232 LASKFACC 239
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 277 SNGRG-GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
S+G G G+ A+ YK VLLG+++VGKSSLV+RFV+ F + E+TIG
Sbjct: 19 SSGSGLGQSYAAGSSEAARPPSYKTVLLGDASVGKSSLVVRFVKNTFSDTMETTIG 74
>gi|402900351|ref|XP_003919574.1| PREDICTED: LOW QUALITY PROTEIN: histone acetyltransferase KAT2A
[Papio anubis]
Length = 954
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 84/117 (71%), Gaps = 22/117 (18%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN DTF RAK+W
Sbjct: 139 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNW 198
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGE 192
VKEL QR A PNIVIALAGNKADL S+R VE+ E
Sbjct: 199 VKEL---------------------QRQASPNIVIALAGNKADL-ASKRAVEFQANE 233
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 86 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 139
>gi|406604009|emb|CCH44471.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 208
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 103/166 (62%), Gaps = 26/166 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + D TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT +F +A+ W
Sbjct: 43 AAFLTQRCIIGDKTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPASFIKARHW 102
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEYSEGE 192
+KEL A +I+IAL GNK D+ S R V Y EGE
Sbjct: 103 ---------------------IKELHEQASKDIIIALVGNKLDVVEEDESNRKVAYEEGE 141
Query: 193 AYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGR 236
A E GL+F+ETSAKT+ NV E+F+ I +K+P E +G+ GR
Sbjct: 142 TLANEEGLIFLETSAKTSFNVKEVFMNIGQKIPNPENVTASGEQGR 187
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 30/42 (71%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ +I KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 2 SNKQITPVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGA 43
>gi|401412488|ref|XP_003885691.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325120111|emb|CBZ55665.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 244
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 103/161 (63%), Gaps = 24/161 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF TQ + +D T++FEIWDTAGQER+ +LAPMYYR A AAI+VYD +N +F RA
Sbjct: 76 AAFFTQALQVDGRTVKFEIWDTAGQERFSSLAPMYYRGAAAAIVVYDQSNMASFDRA--- 132
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
+ WV++LQ NIVIALA NK DLP + V+ + G YA
Sbjct: 133 ------------------QVWVQQLQLSGNSNIVIALAANKMDLP--HKQVDLNLGRQYA 172
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGG 235
EENGLLF+ETSAKT NV ++F IA++LP+K V+ G GG
Sbjct: 173 EENGLLFIETSAKTGQNVQQLFSMIARRLPEKPVSAQGLGG 213
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
P A+ YK VLLG+++VGKSSLV+RFV+ F + E+TIG
Sbjct: 31 PAASEPARPPSYKTVLLGDASVGKSSLVVRFVKNTFSDTMETTIG 75
>gi|302781680|ref|XP_002972614.1| rab family GTPase [Selaginella moellendorffii]
gi|300160081|gb|EFJ26700.1| rab family GTPase [Selaginella moellendorffii]
Length = 205
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 101/152 (66%), Gaps = 23/152 (15%)
Query: 76 AAFITQTVCL-DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
A+F++QT+ L D T++FEIWDTAGQERY +LAP+YYR A AA++VYD+T++++F +A+
Sbjct: 66 ASFLSQTIALQDSSTVKFEIWDTAGQERYASLAPLYYRGASAAVVVYDLTSKESFQKAQY 125
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W VKELQ+ A IV+AL GNKADL + R V E AY
Sbjct: 126 W---------------------VKELQKHANAGIVLALVGNKADL-DNLRTVSTDEARAY 163
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
AE N + F E SAKTA N+NE+F EIAK+LP+
Sbjct: 164 AESNSMFFTEASAKTAGNINELFEEIAKRLPR 195
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 288 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE-------CQSSHSI 340
N K + KLVLLG+S VGKS +VLRFVRGQF + T+G Q S ++
Sbjct: 22 NGSQDTKHLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTIALQDSSTV 81
Query: 341 SFSM 344
F +
Sbjct: 82 KFEI 85
>gi|115482198|ref|NP_001064692.1| Os10g0441800 [Oryza sativa Japonica Group]
gi|78708729|gb|ABB47704.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113639301|dbj|BAF26606.1| Os10g0441800 [Oryza sativa Japonica Group]
gi|215687260|dbj|BAG91825.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765709|dbj|BAG87406.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 250
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 113/181 (62%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L+D T++FEIWDTAGQERY
Sbjct: 97 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTLALEDSTTVKFEIWDTAGQERYAA 147
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A AAI+VYDIT+ ++F +A+ WV KELQ+
Sbjct: 148 LAPLYYRGAGAAIVVYDITSSESFNKAQYWV---------------------KELQKHGS 186
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P++++AL GNKADL R V + + YAE N + F+ETSAKTA N+N++F EIAK+LP
Sbjct: 187 PDMIMALVGNKADL-HDNRSVSSQDAQEYAERNTMFFIETSAKTADNINQLFEEIAKRLP 245
Query: 226 K 226
+
Sbjct: 246 R 246
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 275 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+N+ G G I N T K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 60 ANNAGGVGTISNENSGTDLKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 117
>gi|297816780|ref|XP_002876273.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322111|gb|EFH52532.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 202
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 112/181 (61%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L D T++FEIWDTAGQERY
Sbjct: 48 CIVLRFVRGQFDATSKVTVG---------ASFLSQTIALQDSTTVKFEIWDTAGQERYSA 98
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A+IVYDIT+ ++F +A+ WVK ELQ+
Sbjct: 99 LAPLYYRGAGVAVIVYDITSPESFKKAQYWVK---------------------ELQKHGS 137
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P+IV+AL GNKADL +R V +G AE+NG+ F+ETSAKTA N+N++F EI K+LP
Sbjct: 138 PDIVMALVGNKADL-HEKREVPTEDGIGLAEKNGMFFIETSAKTADNINQLFEEIGKRLP 196
Query: 226 K 226
+
Sbjct: 197 R 197
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 292 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE-------CQSSHSISFSM 344
AK + KLVLLG+S VGKS +VLRFVRGQF + T+G Q S ++ F +
Sbjct: 28 DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEI 87
>gi|226531049|ref|NP_001149278.1| LOC100282900 [Zea mays]
gi|195625976|gb|ACG34818.1| ras-related protein RHN1 [Zea mays]
gi|223949965|gb|ACN29066.1| unknown [Zea mays]
gi|413957021|gb|AFW89670.1| Ras protein RHN1 [Zea mays]
Length = 200
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 112/181 (61%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVTI-RFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L+D TI +FEIWDTAGQERY
Sbjct: 47 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTLALEDSTIVKFEIWDTAGQERYAA 97
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A AAI+VYDIT+ ++F +A+ WV KELQ+
Sbjct: 98 LAPLYYRGAAAAIVVYDITSPESFSKAQYWV---------------------KELQKHGS 136
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P IV+ L GNKADL R V + + YAE+N + F+ETSAKTA N+N++F EIAK+LP
Sbjct: 137 PGIVMVLVGNKADL-HDNRSVSSQDAQDYAEKNNMFFIETSAKTADNINQLFEEIAKRLP 195
Query: 226 K 226
+
Sbjct: 196 R 196
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 281 GGRIQRPNDQT---QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GG ND + +K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 13 GGLNTISNDSSPDASSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 67
>gi|401623607|gb|EJS41700.1| vps21p [Saccharomyces arboricola H-6]
Length = 210
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 101/154 (65%), Gaps = 23/154 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V +++ T++FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +S+
Sbjct: 42 AAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVT------KPQSF 95
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--PTSRRCVEYSEGEA 193
+K A+ WVKEL A +I+IAL GNK D+ R V EGE
Sbjct: 96 IK---------------ARHWVKELHEQASKDIIIALVGNKVDMLQEGGERKVAREEGEK 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
AEE GLLF ETSAKT NVN++F+ I +K+P K
Sbjct: 141 LAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLK 174
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS------SHSISFSM 344
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG + H++ F +
Sbjct: 5 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEI 60
>gi|242036893|ref|XP_002465841.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
gi|241919695|gb|EER92839.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
Length = 200
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 112/181 (61%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVTI-RFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L+D TI +FEIWDTAGQERY
Sbjct: 47 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTLALEDSTIVKFEIWDTAGQERYAA 97
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A AAI+VYDIT+ ++F +A+ WV KELQ+
Sbjct: 98 LAPLYYRGAAAAIVVYDITSPESFSKAQYWV---------------------KELQKHGS 136
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P IV+ L GNKADL R V + + YAE+N + F+ETSAKTA N+N++F EIAK+LP
Sbjct: 137 PGIVMVLVGNKADL-HDNRSVSSQDAQDYAEKNNMFFIETSAKTADNINQLFEEIAKRLP 195
Query: 226 K 226
+
Sbjct: 196 R 196
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQ---TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 325
M S++ + GG ND T +K + KLVLLG+S VGKS +VLRFVRGQF
Sbjct: 1 MGCSSSVPARSTGGLNTISNDSSPATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPT 60
Query: 326 QESTIGG 332
+ T+G
Sbjct: 61 SKVTVGA 67
>gi|18410144|ref|NP_567008.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75169988|sp|Q9CB01.1|RABF1_ARATH RecName: Full=Ras-related protein RABF1; Short=AtRABF1; AltName:
Full=Ras-related protein Ara-6; AltName:
Full=Ras-related protein Rab5C; Short=AtRab5C
gi|13160603|dbj|BAB32953.1| Ara6 [Arabidopsis thaliana]
gi|27754459|gb|AAO22677.1| putative Rab family GTP-binding protein (Ara6) [Arabidopsis
thaliana]
gi|28393957|gb|AAO42386.1| putative Rab family GTP-binding protein (Ara6) [Arabidopsis
thaliana]
gi|332645777|gb|AEE79298.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 202
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 112/181 (61%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L D T++FEIWDTAGQERY
Sbjct: 48 CIVLRFVRGQFDATSKVTVG---------ASFLSQTIALQDSTTVKFEIWDTAGQERYSA 98
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A+IVYDIT+ ++F +A+ WVK ELQ+
Sbjct: 99 LAPLYYRGAGVAVIVYDITSPESFKKAQYWVK---------------------ELQKHGS 137
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P+IV+AL GNKADL +R V +G AE+NG+ F+ETSAKTA N+N++F EI K+LP
Sbjct: 138 PDIVMALVGNKADL-HEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEIGKRLP 196
Query: 226 K 226
+
Sbjct: 197 R 197
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 292 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 28 DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVG 67
>gi|17066210|emb|CAD12439.1| Rab5c GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 104/165 (63%), Gaps = 27/165 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
FY Y S AAF+TQ + + + TI+FEIWDTAGQERY +LAPMYYR A AA+IVYDITN
Sbjct: 52 FYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQERYRSLAPMYYRGASAAVIVYDITN 111
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F A K W+ EL+ + +I+IALAGNK DL R
Sbjct: 112 KKSFEGA---------------------KGWIHELKSVHSNDIIIALAGNKNDLE-EHRA 149
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP--KKE 228
V+ E++A N +LF+ETSAKT NVNE+F+ IAKKLP KKE
Sbjct: 150 VDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLPLHKKE 194
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K+ KLVLLG+++VGKS +V+RF + +F+EYQESTIG
Sbjct: 24 KVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGA 62
>gi|124505771|ref|XP_001350999.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
gi|23510642|emb|CAD49027.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 104/165 (63%), Gaps = 27/165 (16%)
Query: 69 FYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
FY Y S AAF+TQ + + + TI+FEIWDTAGQERY +LAPMYYR A AA+IVYDITN
Sbjct: 52 FYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQERYRSLAPMYYRGASAAVIVYDITN 111
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F A K W+ EL+ + +I+IALAGNK DL R
Sbjct: 112 KKSFEGA---------------------KGWIHELKSVHSNDIIIALAGNKNDLE-EHRA 149
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP--KKE 228
V+ E++A N +LF+ETSAKT NVNE+F+ IAKKLP KKE
Sbjct: 150 VDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLPLHKKE 194
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K+ KLVLLG+++VGKS +V+RF + +F+EYQESTIG
Sbjct: 24 KVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGA 62
>gi|68479347|ref|XP_716205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68479514|ref|XP_716121.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483715|ref|XP_714216.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483800|ref|XP_714175.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435716|gb|EAK95092.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435764|gb|EAK95139.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437777|gb|EAK97117.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437866|gb|EAK97205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238880208|gb|EEQ43846.1| vacuolar protein sorting-associated protein 21 [Candida albicans
WO-1]
Length = 216
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 110/194 (56%), Gaps = 40/194 (20%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + + TI++EIWDTAGQER+ +LAPMYYRNAQAAI+VYDIT +F +A+ W
Sbjct: 45 AAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMYYRNAQAAIVVYDITKPASFIKARHW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--------PTSRRCVE 187
VKEL A N D I IAL GNK DL + R V
Sbjct: 105 VKELHEQA--NRD-------------------ITIALVGNKLDLVEDDSAEDGETLRKVS 143
Query: 188 YSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-----KEVNNGQGGRRL---- 238
EG++ A+E GLLF ETSAKT NVNE+FV I K+P E G GRR+
Sbjct: 144 VEEGQSLADEEGLLFFETSAKTGNNVNEVFVGIGSKIPSVTVTGGEAQEGSNGRRIDLTA 203
Query: 239 -VETAEAPKTSNCC 251
+ A AP+ S CC
Sbjct: 204 NTDNANAPR-STCC 216
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 29/42 (69%)
Query: 290 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
Q A KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 3 QHPAPATAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIG 44
>gi|406693962|gb|EKC97301.1| GTPase [Trichosporon asahii var. asahii CBS 8904]
Length = 241
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 105/171 (61%), Gaps = 10/171 (5%)
Query: 76 AAFITQTVC----LDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGR 131
AAF+TQT L++ ++FEIWDTAGQER+H+LAPMYYRNA AA++VYDIT + +
Sbjct: 45 AAFLTQTDLPECRLENRVVKFEIWDTAGQERFHSLAPMYYRNAAAAVVVYDITKAASLEK 104
Query: 132 AKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEG 191
AK+WVKELQR A PNI + + ++ + A A AD + R V SE
Sbjct: 105 AKAWVKELQRQANPNI-VIALVGNKLDLVEGSSASESADAEADTPADDEETARQVPTSEA 163
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP-----KKEVNNGQGGRR 237
+AYA E+GLLF E SAKT NV E+F EIAK +P K Q GRR
Sbjct: 164 QAYATESGLLFFEASAKTGTNVQEVFTEIAKTIPLDSIAPKPAAGAQQGRR 214
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 29/39 (74%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K Q KLVLLGE+AVGKSSLVLRFV+ F+E TIG
Sbjct: 7 KAVQVKLVLLGEAAVGKSSLVLRFVQNDFNENTSPTIGA 45
>gi|171694842|ref|XP_001912345.1| hypothetical protein [Podospora anserina S mat+]
gi|170947663|emb|CAP59825.1| unnamed protein product [Podospora anserina S mat+]
Length = 219
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 113/182 (62%), Gaps = 34/182 (18%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 38 FVKDQFDSYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 88
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AKSWVK ELQR A NI+I
Sbjct: 89 YRNANCAVVVYDITQAASLDKAKSWVK---------------------ELQRQANENIII 127
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL T +R + +E EAYA+E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 128 ALAGNKLDLVTEQPDKRAIPTAEAEAYAKEAGLLFFETSAKTAENVQELFTAIAKKLPLD 187
Query: 228 EV 229
+V
Sbjct: 188 QV 189
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 15 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 53
>gi|238600296|ref|XP_002395104.1| hypothetical protein MPER_04900 [Moniliophthora perniciosa FA553]
gi|215465264|gb|EEB96034.1| hypothetical protein MPER_04900 [Moniliophthora perniciosa FA553]
Length = 224
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 114/232 (49%), Gaps = 76/232 (32%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA++VYD+T
Sbjct: 15 IGAAFLTQKCRLEDRVLRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDVTK-------- 66
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-------------- 179
+ +AKSWVKELQR A PNIVIALAGNK DL
Sbjct: 67 -------------ASSLEKAKSWVKELQRQANPNIVIALAGNKVDLVQPSPSSSGTSSSE 113
Query: 180 ---------------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFV 218
S R V E +AYA E GLLF ETSAKT + ++F
Sbjct: 114 SEDEADDATATPGEAPASGGEAESLRQVPREEAQAYATEAGLLFFETSAKTGEGIVDVFT 173
Query: 219 EIAKKLPKKEV------------------NNGQGGRRLVETAEAPKTSNCCN 252
EIAKK+P + + + +GG L E A PK + CN
Sbjct: 174 EIAKKIPIEHILASRGGAGRGATGNRAGASQPEGGVNLEENANKPK--DACN 223
>gi|412993473|emb|CCO13984.1| unknown [Bathycoccus prasinos]
Length = 208
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 125/223 (56%), Gaps = 33/223 (14%)
Query: 41 GKRQSDCMAQ-IWLKDRVDCMTQIVINVV---FYPYLFS---AAFITQTVCLDDVTIRFE 93
G +QS A+ + L D + +V+ V F+ + S AAF+TQTV +DD ++FE
Sbjct: 7 GAQQSQTQAKLVLLGDMGAGKSSLVLRFVKGQFFEHQESTIGAAFMTQTVTVDDHVVKFE 66
Query: 94 IWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRA 153
IWDTAGQERYH+LAPMYYR A AAIIVYD+ +Q ++ RAKSWV
Sbjct: 67 IWDTAGQERYHSLAPMYYRGAAAAIIVYDMQSQQSWQRAKSWV----------------- 109
Query: 154 KSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNV 213
+ELQR N+VIALAGNK+D R+ + E+ +F+ETSAK+ V
Sbjct: 110 ----RELQRQGNANLVIALAGNKSDCKDMRKVSKEEAEAYAEEQKLSIFLETSAKSGECV 165
Query: 214 NEIFVEIAKKLPKKE----VNNGQGGRRLVETA-EAPKTSNCC 251
N++F IA KLPK+ G+GG L A + + S CC
Sbjct: 166 NDLFYSIANKLPKQARATPQEGGRGGVVLDANAGQNRQKSQCC 208
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 30/35 (85%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
Q KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 14 QAKLVLLGDMGAGKSSLVLRFVKGQFFEHQESTIG 48
>gi|336275989|ref|XP_003352748.1| hypothetical protein SMAC_01582 [Sordaria macrospora k-hell]
gi|380094637|emb|CCC08018.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 220
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 120/210 (57%), Gaps = 42/210 (20%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AKSWVK ELQR A NI+I
Sbjct: 90 YRNANCAVVVYDITQAASLDKAKSWVK---------------------ELQRQANENIII 128
Query: 171 ALAGNKADL---PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL +R ++ ++ AYA+E GLLF ETSAKTA NV +F EIAKKLP
Sbjct: 129 ALAGNKLDLVQEQPDKRAIQTADAAAYAKEAGLLFFETSAKTAENVQNLFTEIAKKLPLD 188
Query: 228 EVNNGQGGRRLVETAEAPKTS---NCCNTQ 254
+V G R + P S NTQ
Sbjct: 189 QV-----GPRHARPGQRPGVSLAPEAANTQ 213
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 54
>gi|344229410|gb|EGV61296.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
gi|344229411|gb|EGV61297.1| hypothetical protein CANTEDRAFT_116954 [Candida tenuis ATCC 10573]
Length = 213
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 107/191 (56%), Gaps = 36/191 (18%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + D TI++EIWDTAGQER+ +LAPMYYRNAQAA++VYDIT +F +A+ W
Sbjct: 44 AAFLTQKCTIGDKTIKYEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPASFLKARHW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR------RCVEYS 189
VKEL A +I IAL GNK DL R V
Sbjct: 104 ---------------------VKELHEQASKDITIALVGNKYDLVEDENDGDTLRKVSVE 142
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG------QGGRRLVETAE 243
EG+ AE+ GLLF ETSAKT+ NVNE+FV I K+P+ G + GR + T
Sbjct: 143 EGQKLAEDEGLLFFETSAKTSYNVNEVFVGIGTKIPESSAPTGVQQAGNEAGRIDLTTGA 202
Query: 244 AP---KTSNCC 251
A +TS CC
Sbjct: 203 ASTTQQTSGCC 213
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIG 43
>gi|403217405|emb|CCK71899.1| hypothetical protein KNAG_0I01080 [Kazachstania naganishii CBS
8797]
Length = 253
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 105/167 (62%), Gaps = 30/167 (17%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V +++ TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T +F +A+ W
Sbjct: 42 AAFLTQRVNINEHTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL----PTSRRCVEYSEG 191
VKEL A +I+IAL GNK D+ PT R+ V EG
Sbjct: 102 ---------------------VKELHEQASKDIIIALVGNKIDMLDEDPTERK-VAREEG 139
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV----NNGQG 234
E A+E LLF ETSAKT NVNE+F++I + +P K+ NNG G
Sbjct: 140 EKLAQEENLLFFETSAKTGANVNEVFLKIGENVPLKQAADGSNNGSG 186
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS------SHSISFSM 344
+ KLVLLGE AVGKSS+VLRFV F E +E TIG + H+I F +
Sbjct: 5 VTSIKLVLLGEVAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNINEHTIKFEI 60
>gi|254566325|ref|XP_002490273.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|238030069|emb|CAY67992.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|328350666|emb|CCA37066.1| Ras-related protein ORAB-1 [Komagataella pastoris CBS 7435]
Length = 206
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 104/175 (59%), Gaps = 23/175 (13%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ TI+FEIWDTAGQERY +LAPMYYRNA A++ YDIT + + RAKS
Sbjct: 48 AAFLTQTIQLDERTTIKFEIWDTAGQERYKSLAPMYYRNANCALVAYDITQESSLDRAKS 107
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W ++ELQ+ A +IV+AL GNK DL R+ V E + Y
Sbjct: 108 W---------------------IQELQKQASADIVVALVGNKLDLEAERK-VSTKEAKEY 145
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSN 249
A+E GL+F E SAKT + ++F IA KLP +E N RR P T+N
Sbjct: 146 ADELGLIFKEISAKTGEGIKDVFHSIASKLPVEEKLNSATKRRRNIDLNRPSTNN 200
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 31/41 (75%)
Query: 292 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ + Q+KLVLLGESAVGKSS+V RFV F + +ESTIG
Sbjct: 8 EPRFAQFKLVLLGESAVGKSSIVHRFVTDSFDDLRESTIGA 48
>gi|406697451|gb|EKD00710.1| GTPase [Trichosporon asahii var. asahii CBS 8904]
Length = 193
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 119/206 (57%), Gaps = 28/206 (13%)
Query: 51 IWLKDRVDCMTQIVINVVFYPYLFS-AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAP 108
+ L + D Q+V + L++ AAF+TQTV LD+ T ++FEIWDTAGQERY +LAP
Sbjct: 10 VLLDEFSDFRVQVVCDADAAFLLYAGAAFLTQTVKLDEATNVKFEIWDTAGQERYKSLAP 69
Query: 109 MYYRNAQAAIIVYDITN--QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPP 166
+Y+RNA AAIIVYDIT + +F +AK+WV+EL QR A P
Sbjct: 70 IYFRNANAAIIVYDITQPPETSFDKAKAWVREL---------------------QRQADP 108
Query: 167 NIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
NIVI L GNK DL S+R G+ +A+E GLLF E SAK+ V +F+EIAK LP
Sbjct: 109 NIVIMLVGNKLDL-ASQRKTPRELGQQFAQEEGLLFCEASAKSGEGVESMFMEIAKALPL 167
Query: 227 KEVNNGQGGRRLV--ETAEAPKTSNC 250
GQ G V + EA NC
Sbjct: 168 NAPKPGQQGGVKVNPQQQEAQSACNC 193
>gi|310790093|gb|EFQ25626.1| Ras family protein [Glomerella graminicola M1.001]
Length = 221
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 109/178 (61%), Gaps = 34/178 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 40 FVKDQFDSYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 90
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 91 YRNANCAVVVYDITQSASLDKAKAWVK---------------------ELQRQANENIII 129
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
ALAGNK DL T +R V E EAYA E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 130 ALAGNKLDLVTEQPDKRAVSTEEAEAYAREAGLLFFETSAKTAENVKELFTAIAKKLP 187
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 17 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIG 54
>gi|405960207|gb|EKC26148.1| Ras-related protein Rab-5B [Crassostrea gigas]
Length = 818
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 105/171 (61%), Gaps = 22/171 (12%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AA++T+T+ + + T I+F+IWDTAGQERYH+LAPMYYR A AA++VYDIT+Q +F RA++
Sbjct: 620 AAYLTKTINVQNSTAIKFDIWDTAGQERYHSLAPMYYRGAPAAVVVYDITSQTSFSRAQA 679
Query: 135 WVKELQRMAP---------------------PNIDTFGRAKSWVKELQRMAPPNIVIALA 173
WVKEL + A P +F A+ W +E+ I L
Sbjct: 680 WVKELTQQANSQIVIALVGNKADMASEGRVIPTEVSFKEAQRWTREIIDFGGSCSYIILL 739
Query: 174 GNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
GNK+DL R V Y +G+ +A NGL+F E SAKT MNV+++F +A K+
Sbjct: 740 GNKSDLSNDLRAVPYEDGKEFASNNGLMFTEVSAKTGMNVDDVFTNLAAKI 790
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 266 ILTMANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 325
+ M+++ N G + + + K Q KLVLLGES VGKSS+ LRFVRG+F+E
Sbjct: 554 LFAMSSAKRPNGRASGPPVGGARNGPEGKSKQIKLVLLGESGVGKSSIALRFVRGEFNEN 613
Query: 326 QESTIGG-------ECQSSHSISFSM 344
E+TIG Q+S +I F +
Sbjct: 614 GEATIGAAYLTKTINVQNSTAIKFDI 639
>gi|6324663|ref|NP_014732.1| Vps21p [Saccharomyces cerevisiae S288c]
gi|549795|sp|P36017.1|VPS21_YEAST RecName: Full=Vacuolar protein sorting-associated protein 21;
AltName: Full=GTP-binding protein YPT51; AltName:
Full=Vacuolar protein-targeting protein 12
gi|441477|emb|CAA82543.1| VPS21 product [Saccharomyces cerevisiae]
gi|483567|emb|CAA53769.1| ypt51p [Saccharomyces cerevisiae]
gi|1164935|emb|CAA64010.1| YOR3154c [Saccharomyces cerevisiae]
gi|1420257|emb|CAA99285.1| VPS21 [Saccharomyces cerevisiae]
gi|151945713|gb|EDN63954.1| small GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190407421|gb|EDV10688.1| vacuolar protein sorting-associated protein 21 [Saccharomyces
cerevisiae RM11-1a]
gi|207341191|gb|EDZ69312.1| YOR089Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272985|gb|EEU07949.1| Vps21p [Saccharomyces cerevisiae JAY291]
gi|259149571|emb|CAY86375.1| Vps21p [Saccharomyces cerevisiae EC1118]
gi|285814973|tpg|DAA10866.1| TPA: Vps21p [Saccharomyces cerevisiae S288c]
gi|323302866|gb|EGA56670.1| Vps21p [Saccharomyces cerevisiae FostersB]
gi|323307162|gb|EGA60445.1| Vps21p [Saccharomyces cerevisiae FostersO]
gi|323331470|gb|EGA72885.1| Vps21p [Saccharomyces cerevisiae AWRI796]
gi|323335502|gb|EGA76787.1| Vps21p [Saccharomyces cerevisiae Vin13]
gi|323346523|gb|EGA80810.1| Vps21p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352075|gb|EGA84612.1| Vps21p [Saccharomyces cerevisiae VL3]
gi|349581251|dbj|GAA26409.1| K7_Vps21p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763044|gb|EHN04575.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296418|gb|EIW07520.1| Vps21p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 210
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 98/154 (63%), Gaps = 23/154 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V +++ T++FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T +F +A+ W
Sbjct: 42 AAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--PTSRRCVEYSEGEA 193
VKEL A +I+IAL GNK D+ R V EGE
Sbjct: 102 ---------------------VKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEGEK 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
AEE GLLF ETSAKT NVN++F+ I +K+P K
Sbjct: 141 LAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLK 174
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGA 42
>gi|149029653|gb|EDL84824.1| RAB5B, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 154
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 84/113 (74%), Gaps = 22/113 (19%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITNQ+TF RAK+W
Sbjct: 55 AAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTW 114
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
VKE LQR A P+IVIALAGNKADL ++R VEY
Sbjct: 115 VKE---------------------LQRQASPSIVIALAGNKADL-ANKRMVEY 145
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|365758386|gb|EHN00232.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 209
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 101/166 (60%), Gaps = 26/166 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V +++ T++FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T +F +A+ W
Sbjct: 42 AAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--PTSRRCVEYSEGEA 193
VKEL A +I+IAL GNK D+ R V EGE
Sbjct: 102 ---------------------VKELHEQASKDIIIALVGNKIDVLQDGGERKVAKEEGEK 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK---EVNNGQGGR 236
AEE GLLF ETSAKT NVN +F+ I +K+P K E NN G
Sbjct: 141 LAEEKGLLFFETSAKTGENVNNVFLGIGEKIPLKKAEEQNNANEGE 186
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGA 42
>gi|190345894|gb|EDK37861.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 106/189 (56%), Gaps = 34/189 (17%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + + TI++EIWDTAGQER+ +LAPMYYRNAQAA++VYDIT +F +A+ W
Sbjct: 44 AAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPASFIKARHW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--------PTSRRCVE 187
VKEL A +I IAL GNK DL +S R V
Sbjct: 104 ---------------------VKELHEQASKDITIALVGNKHDLVEDDNDGDDSSLRKVS 142
Query: 188 YSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ-----GGRRLVETA 242
EG+ A+E GLLF ETSAKTA NVNE+FV I K+P+ + Q GR + T
Sbjct: 143 IEEGQKLADEEGLLFFETSAKTAYNVNEVFVGIGSKIPEAPSSKPQQPQATDGRIDLSTG 202
Query: 243 EAPKTSNCC 251
AP C
Sbjct: 203 TAPAADGCA 211
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGA 44
>gi|403161720|ref|XP_003322028.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171898|gb|EFP77609.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 285
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 105/191 (54%), Gaps = 30/191 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L+D I+FEIWDTAGQER+H+LAPMYYRNAQAAI+ YDIT + +AKSW
Sbjct: 58 AAFLTQKCRLEDKIIKFEIWDTAGQERFHSLAPMYYRNAQAAIVAYDITKSSSLDKAKSW 117
Query: 136 VKELQRMAPPNI--------------DTFGRAKSWVKELQRMAPPNIVIALAGNKADLP- 180
VKELQR NI D A + P+ A N LP
Sbjct: 118 VKELQRQGHANIVIALIGNKLDLVQSDADQSASNGSSSSNADDEPDDATATPDNATSLPD 177
Query: 181 ----------TSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV- 229
+S+R V E EAYA+EN LLF ETSAKT + E+F +IA K+P + +
Sbjct: 178 STAANPNLSSSSKRQVTKEEAEAYAQENNLLFFETSAKTGEGIVEVFTQIAGKIPLEVIL 237
Query: 230 ----NNGQGGR 236
NN GGR
Sbjct: 238 SGRGNNTAGGR 248
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 34/46 (73%)
Query: 286 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+PN T K Q KLVLLGE+AVGKSS+VLRFV+ F E +E TIG
Sbjct: 12 KPNPSTDGKPVQVKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIG 57
>gi|296818687|ref|XP_002849680.1| GTP-binding protein ypt5 [Arthroderma otae CBS 113480]
gi|238840133|gb|EEQ29795.1| GTP-binding protein ypt5 [Arthroderma otae CBS 113480]
Length = 206
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 103/154 (66%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T ++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 41 AAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKS 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT---SRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL + +R VE ++
Sbjct: 101 WVK---------------------ELQRQANENIIIALAGNKLDLVSESPDKRAVETADA 139
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
AYA+E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 140 AAYAKEAGLLFFETSAKTSTNVRELFTAIAKKLP 173
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 10/46 (21%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
P + A+ Q+KL SSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 PGGRPSARFAQFKL----------SSLVLRFVKDQFDDYRESTIGA 41
>gi|50550089|ref|XP_502517.1| YALI0D07128p [Yarrowia lipolytica]
gi|49648385|emb|CAG80705.1| YALI0D07128p [Yarrowia lipolytica CLIB122]
Length = 209
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 116/211 (54%), Gaps = 31/211 (14%)
Query: 39 MSGKRQSDCMAQIWLKDRVDCMTQIVINVVFYPY------LFSAAFITQTVCLDDVTIRF 92
MS R++ + + L + + +V+ V + AAF+TQ D TI+F
Sbjct: 1 MSAPRKTTSVKLVLLGEAAVGKSSLVLRFVSNEFQENKEPTIGAAFLTQKCNFPDRTIKF 60
Query: 93 EIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGR 152
EIWDTAGQER+ +LAPMYYRNAQ A++VYDIT +F +A+ W
Sbjct: 61 EIWDTAGQERFASLAPMYYRNAQTALVVYDITKPQSFIKARHW----------------- 103
Query: 153 AKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEYSEGEAYAEENGLLFMETSAKT 209
V EL+ A P I+IAL GNK DL S R V EG+ AEE GLLF ETSAKT
Sbjct: 104 ----VSELKSQASPGIIIALVGNKRDLVDDDESARKVAEDEGKQLAEEEGLLFFETSAKT 159
Query: 210 AMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE 240
+NV ++F+ IA+K+P +E GG R E
Sbjct: 160 GLNVKDVFMAIAQKIP-EEQKAPSGGLRGAE 189
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 29/39 (74%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K KLVLLGE+AVGKSSLVLRFV +F E +E TIG
Sbjct: 6 KTTSVKLVLLGEAAVGKSSLVLRFVSNEFQENKEPTIGA 44
>gi|52077019|dbj|BAD46052.1| putative GTP binding protein [Oryza sativa Japonica Group]
Length = 226
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 104/177 (58%), Gaps = 29/177 (16%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF +Q + +D+ T++ +IWDTAGQERYH+LAPMYYR A AA++VYDI++ D++ RA+ W
Sbjct: 26 AAFFSQVLIMDEATVKLDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISSTDSYIRARKW 85
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V ELQR P++V+AL GNK DL R+ V E YA
Sbjct: 86 ---------------------VDELQRQGNPHLVMALVGNKVDLEEKRQ-VGTQEAMEYA 123
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
E NGL F+ETSAKT+ NV E+F E+ K V N RRL+ TS CC
Sbjct: 124 ERNGLFFIETSAKTSQNVTELFYELGKHYRNNSVGFNSLMHRRLI------ITSTCC 174
>gi|403167509|ref|XP_003327295.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375167062|gb|EFP82876.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 215
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 98/151 (64%), Gaps = 23/151 (15%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV +++ TI+FEIWDTAGQERY +LAPMYYRNA A++VYDIT+ + +AK
Sbjct: 50 AAFLTQTVKINEQTTIKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITSSASLEKAKV 109
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W ++ELQ+ A IVIALAGNKADL RR V E + +
Sbjct: 110 W---------------------IRELQKQADAQIVIALAGNKADL-EERRQVPTEEAQRF 147
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
AEE LLF ETSAK + NV +IF IAKKLP
Sbjct: 148 AEEENLLFFETSAKDSTNVTDIFTAIAKKLP 178
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ F EY+ESTIG
Sbjct: 15 QFKLVLLGESAVGKSSLVLRFVQNDFQEYRESTIGA 50
>gi|66359380|ref|XP_626868.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
gi|46228121|gb|EAK89020.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
Length = 218
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 100/151 (66%), Gaps = 23/151 (15%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQ+V +DD T++FEIWDTAGQERY +LAPMYYR A AAI+VYDITN +TF AKS
Sbjct: 48 AAFMTQSVNVDDDYTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNVETFQGAKS 107
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W+ ELQ NI+ +IV+AL GNK DL +S R V+ Y
Sbjct: 108 WISELQ-----NINN----------------NDIVVALVGNKYDLESS-RTVDSETARNY 145
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
A+E G+L ETSAKT NV E+F EIA+KLP
Sbjct: 146 AKEKGILSFETSAKTGYNVQELFEEIARKLP 176
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
K KLVLLG+++VGKS LV+RF + +FHEYQE TIG
Sbjct: 10 KTLHLKLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIG 47
>gi|402586726|gb|EJW80663.1| Rab5 protein, partial [Wuchereria bancrofti]
Length = 146
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/113 (63%), Positives = 84/113 (74%), Gaps = 22/113 (19%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITNQ++F +AK+W
Sbjct: 55 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFAKAKNW 114
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
VKELQ R A PNIVIAL+GNKADL ++R VEY
Sbjct: 115 VKELQ---------------------RQASPNIVIALSGNKADLA-NKRVVEY 145
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 41/53 (77%), Gaps = 5/53 (9%)
Query: 280 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
R G PN K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RSGNTGGPN-----KTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|327298001|ref|XP_003233694.1| RAB GTPase [Trichophyton rubrum CBS 118892]
gi|326463872|gb|EGD89325.1| RAB GTPase [Trichophyton rubrum CBS 118892]
gi|326470113|gb|EGD94122.1| RAB GTPase [Trichophyton tonsurans CBS 112818]
gi|326484352|gb|EGE08362.1| GTP-binding protein ypt5 [Trichophyton equinum CBS 127.97]
Length = 216
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 102/154 (66%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T ++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 51 AAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKS 110
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL +R +E ++
Sbjct: 111 WVK---------------------ELQRQANENIIIALAGNKLDLVNESPDKRAIETADA 149
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
AYA+E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 150 AAYAKEAGLLFFETSAKTSTNVRELFTAIAKKLP 183
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 38/46 (82%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
P +T A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 PGGRTSARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 51
>gi|302507208|ref|XP_003015565.1| hypothetical protein ARB_05876 [Arthroderma benhamiae CBS 112371]
gi|291179133|gb|EFE34920.1| hypothetical protein ARB_05876 [Arthroderma benhamiae CBS 112371]
Length = 231
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 102/154 (66%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T ++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 66 AAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKS 125
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL +R +E ++
Sbjct: 126 WVK---------------------ELQRQANENIIIALAGNKLDLVNESPDKRAIETADA 164
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
AYA+E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 165 AAYAKEAGLLFFETSAKTSTNVRELFTAIAKKLP 198
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 15/61 (24%)
Query: 287 PNDQTQAKICQYKLVLLGESA---------------VGKSSLVLRFVRGQFHEYQESTIG 331
P +T A+ Q+KLVLLG+ + + SSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 PGGRTSARFAQFKLVLLGKVSRFNIADVRFKNEGFMLTTSSLVLRFVKDQFDDYRESTIG 65
Query: 332 G 332
Sbjct: 66 A 66
>gi|146420668|ref|XP_001486288.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 105/189 (55%), Gaps = 34/189 (17%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + + TI++EIWDTAGQER+ +LAPMYYRNAQAA++VYDIT +F +A+ W
Sbjct: 44 AAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPASFIKARHW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--------PTSRRCVE 187
VKEL A +I IAL GNK DL +S R V
Sbjct: 104 ---------------------VKELHEQASKDITIALVGNKHDLVEDDNDGDDSSLRKVS 142
Query: 188 YSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP-----KKEVNNGQGGRRLVETA 242
EG+ A+E GLLF ETSAKTA NVNE+FV I K+P K + GR + T
Sbjct: 143 IEEGQKLADEEGLLFFETSAKTAYNVNEVFVGIGSKIPEAPLLKPQQPQATDGRIDLSTG 202
Query: 243 EAPKTSNCC 251
AP C
Sbjct: 203 TAPAADGCA 211
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGA 44
>gi|67610128|ref|XP_667084.1| Rab5 [Cryptosporidium hominis TU502]
gi|54658188|gb|EAL36862.1| Rab5 [Cryptosporidium hominis]
Length = 218
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 103/161 (63%), Gaps = 26/161 (16%)
Query: 69 FYPY---LFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDIT 124
F+ Y AAF+TQ+V +DD T++FEIWDTAGQERY +LAPMYYR A AAI+VYDIT
Sbjct: 38 FHEYQEPTIGAAFMTQSVNVDDDYTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDIT 97
Query: 125 NQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRR 184
N +TF AKSW+ ELQ NI+ +IV+AL GNK DL +S R
Sbjct: 98 NVETFQGAKSWISELQ-----NINN----------------NDIVVALVGNKYDLESS-R 135
Query: 185 CVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
V+ YA+E G+L ETSAKT NV E+F EIA+KLP
Sbjct: 136 TVDSETARNYAKEKGILSFETSAKTGYNVQELFEEIARKLP 176
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
K KLVLLG+++VGKS LV+RF + +FHEYQE TIG
Sbjct: 10 KTLHLKLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIG 47
>gi|302654746|ref|XP_003019172.1| hypothetical protein TRV_06778 [Trichophyton verrucosum HKI 0517]
gi|291182879|gb|EFE38527.1| hypothetical protein TRV_06778 [Trichophyton verrucosum HKI 0517]
Length = 211
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 102/154 (66%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T ++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 46 AAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKS 105
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL +R +E ++
Sbjct: 106 WVK---------------------ELQRQANENIIIALAGNKLDLVNESPDKRAIETADA 144
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
AYA+E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 145 AAYAKEAGLLFFETSAKTSTNVRELFTAIAKKLP 178
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 5/46 (10%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
P +T A+ Q+KLVLLG KSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 PGGRTSARFAQFKLVLLG-----KSSLVLRFVKDQFDDYRESTIGA 46
>gi|315040105|ref|XP_003169430.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
gi|311346120|gb|EFR05323.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
Length = 216
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 102/154 (66%), Gaps = 25/154 (16%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ LD+ T ++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 51 AAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKS 110
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL +R +E ++
Sbjct: 111 WVK---------------------ELQRQANENIIIALAGNKLDLVNESPDKRAIETADA 149
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
AYA+E GLLF ETSAKT+ NV E+F IAKKLP
Sbjct: 150 AAYAKEAGLLFFETSAKTSTNVRELFTAIAKKLP 183
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 37/46 (80%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
P + A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 PGGRPSARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 51
>gi|357146391|ref|XP_003573975.1| PREDICTED: ras-related protein RABF1-like [Brachypodium distachyon]
Length = 200
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 113/181 (62%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L+D T++FEIWDTAGQERY
Sbjct: 46 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTLALEDSTTVKFEIWDTAGQERYAA 96
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A AA++VYDIT+ ++F +A+ W VKELQ+
Sbjct: 97 LAPLYYRGAGAAVVVYDITSAESFSKAQYW---------------------VKELQKHGS 135
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
++V+AL GNKADL +R V + + YAE N + F+ETSAKTA N+N++F EIAK+LP
Sbjct: 136 QDMVMALVGNKADL-HEKRTVSSQDAQEYAERNSMFFVETSAKTADNINQLFEEIAKRLP 194
Query: 226 K 226
+
Sbjct: 195 R 195
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 269 MANSNNSNSNGRGG--RIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQ 326
M S++ +N GG I N T +K + KLVLLG+S VGKS +VLRFVRGQF
Sbjct: 1 MGCSSSLPANNAGGLSNINNENSATDSKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
Query: 327 ESTIGG 332
+ T+G
Sbjct: 61 KVTVGA 66
>gi|320581319|gb|EFW95540.1| Rab5-like GTPase [Ogataea parapolymorpha DL-1]
Length = 211
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 97/161 (60%), Gaps = 30/161 (18%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + TI+FEIWDTAGQER+ LAP+YYRNAQAA++VYD+T +F +A+ W
Sbjct: 41 AAFLTQRCTIGTKTIKFEIWDTAGQERFANLAPLYYRNAQAALVVYDVTKPASFIKARHW 100
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS---------RRCV 186
VKEL A NIVIAL GNK DL RR V
Sbjct: 101 ---------------------VKELHEQASKNIVIALVGNKYDLVVDSETGEEIEGRRSV 139
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
EG+A A+E GLLF ETSAKTA NVNE+F I K++P++
Sbjct: 140 SVEEGKALADEEGLLFFETSAKTAFNVNEVFTAIGKQIPEE 180
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 29/40 (72%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+K KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 2 SKQTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGA 41
>gi|448535786|ref|XP_003871017.1| Vps21 late endosomal Rab small monomeric GTPase [Candida
orthopsilosis Co 90-125]
gi|380355373|emb|CCG24891.1| Vps21 late endosomal Rab small monomeric GTPase [Candida
orthopsilosis]
Length = 223
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 103/182 (56%), Gaps = 38/182 (20%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + D TI++EIWDTAGQER+ +LAPMYYRNAQAAI+VYDIT + S+
Sbjct: 46 AAFLTQKCTIGDRTIKYEIWDTAGQERFASLAPMYYRNAQAAIVVYDIT------KPASF 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR------------ 183
VK A+ WVKEL A +I IAL GNK DL
Sbjct: 100 VK---------------ARHWVKELHEQASKDITIALVGNKYDLVEDEPEDGNTGEGDQE 144
Query: 184 --RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVET 241
R V EG+A A+E GLLF E SAKT+ NVNE+FV I +K+P NN QGG
Sbjct: 145 LLRKVSKEEGQALADEEGLLFFEASAKTSYNVNEVFVGIGEKIPD---NNKQGGSAATNN 201
Query: 242 AE 243
E
Sbjct: 202 GE 203
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIG 45
>gi|320586194|gb|EFW98873.1| rab GTPase [Grosmannia clavigera kw1407]
Length = 219
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 114/187 (60%), Gaps = 34/187 (18%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T ++FEIWDTAGQERY +LAPMY
Sbjct: 38 FVKDQFDSYRESTIG---------AAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPMY 88
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 89 YRNANCAVVVYDITQASSLDKAKAWVK---------------------ELQRQANENIII 127
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL T +R + +E EAYA+E GLLF ETSAKTA NV E+F IAKKLP
Sbjct: 128 ALAGNKLDLVTEQPDKRAIPEAEAEAYAKEAGLLFFETSAKTAENVTELFTAIAKKLPLD 187
Query: 228 EVNNGQG 234
+ G+
Sbjct: 188 QAGPGRA 194
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 15 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 53
>gi|260946147|ref|XP_002617371.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC 42720]
gi|238849225|gb|EEQ38689.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC 42720]
Length = 213
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 104/169 (61%), Gaps = 28/169 (16%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + D TI++EIWDTAGQER+ +LAPMYYRNAQAA++VYDIT +F +A+ W
Sbjct: 44 AAFLTQKCTVGDRTIKYEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPASFIKARHW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-------PTSRRCVEY 188
VKEL A AK +I IAL GNK DL S R V
Sbjct: 104 VKELHEQA---------AK------------DITIALVGNKYDLVAADNDTDESLRKVSV 142
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRR 237
+EG+A AEE GLLF ETSAKT+ NVN++FV I K+P+ + + G R
Sbjct: 143 AEGQALAEEEGLLFFETSAKTSHNVNDVFVAIGSKIPEAKPADETPGPR 191
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 28/40 (70%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
A KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 5 APATSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGA 44
>gi|336374082|gb|EGO02419.1| hypothetical protein SERLA73DRAFT_175933 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387008|gb|EGO28153.1| hypothetical protein SERLADRAFT_458592 [Serpula lacrymans var.
lacrymans S7.9]
Length = 259
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 104/200 (52%), Gaps = 60/200 (30%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA+++YD+T + +AKSW
Sbjct: 51 AAFLTQKCRLEDRVLRYEIWDTAGQERFHSLAPMYYRNAQAAVVIYDVTKASSLDKAKSW 110
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
VKEL QR A PNIVIAL GNK DL
Sbjct: 111 VKEL---------------------QRQAHPNIVIALVGNKIDLVRPLSLSLGFTPHPDS 149
Query: 180 --------------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVE 219
P R V E +AYA E GLLF ETSAKT + E+F
Sbjct: 150 EEEADDATATPDGTTSGDAGPVCLRQVPREEAQAYAAETGLLFSETSAKTGEGIVEVFTA 209
Query: 220 IAKKLPKKEV---NNGQGGR 236
IAKK+P + + + G GR
Sbjct: 210 IAKKIPIEHIIASSRGSVGR 229
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+K Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 12 SKSVQVKLVLLGEAAVGKSSVVLRFVTNEFQSNKEPTIGA 51
>gi|26350195|dbj|BAC38737.1| unnamed protein product [Mus musculus]
gi|74190579|dbj|BAE25935.1| unnamed protein product [Mus musculus]
gi|148692651|gb|EDL24598.1| RAB5B, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 168
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 84/113 (74%), Gaps = 22/113 (19%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITNQ+TF RAK+W
Sbjct: 55 AAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTW 114
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
VKE LQR A P+IVIALAGNKADL ++R VEY
Sbjct: 115 VKE---------------------LQRQASPSIVIALAGNKADL-ANKRMVEY 145
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 286 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|449551362|gb|EMD42326.1| GTP-binding protein RAB5 [Ceriporiopsis subvermispora B]
Length = 208
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 102/161 (63%), Gaps = 25/161 (15%)
Query: 76 AAFITQTVCLDDV-TIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LDD T++FEIWDTAGQERY APMYYRNA A++VYDIT + +A+S
Sbjct: 41 AAFLTQTVTLDDSSTVKFEIWDTAGQERYK--APMYYRNANCAVVVYDITQAASLEKARS 98
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++E LQR A P+IVIAL GNK+DL +RR V E + Y
Sbjct: 99 WIRE---------------------LQRQADPSIVIALCGNKSDL-AARRQVSQEEAKKY 136
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG 235
A+E GL++ ETSAKT V +IF IAKKLP+ + +G
Sbjct: 137 ADEEGLMWGETSAKTGEGVTDIFTAIAKKLPQTAPPSARGA 177
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+K Q+KLVLLGE + ++L LRFV+ QF +Y+ESTIG
Sbjct: 2 SKQYQFKLVLLGEMQIQYTTLFLRFVKDQFDDYRESTIGA 41
>gi|84626822|gb|ABC59814.1| small GTPase Rab5b [Nicotiana tabacum]
Length = 200
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%), Gaps = 23/152 (15%)
Query: 76 AAFITQTVCL-DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
A+F++QT+ L D T++FEIWDTAGQERY LAP+YYR A A++VYDIT+ ++F +A+
Sbjct: 67 ASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPESFAKAQY 126
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVK ELQ+ P+IV+AL GNKADL +R V +G
Sbjct: 127 WVK---------------------ELQKHGSPDIVMALVGNKADL-HEKREVTTQDGIDC 164
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
AE+NG+ F+ETSAKTA N+N++F EIAK+LP+
Sbjct: 165 AEKNGMFFIETSAKTADNINQLFEEIAKRLPR 196
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 270 ANSNNSNSNGRGGRIQRPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
A+S ++GR + N K + KLVLLG+S VGKS +VLRFVRGQF +
Sbjct: 4 ASSVADRNSGRAAGLNPDNGGAVDPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKV 63
Query: 329 TIGGE-------CQSSHSISFSM 344
T+G Q S ++ F +
Sbjct: 64 TVGASFLSQTIALQDSTTVKFEI 86
>gi|395334748|gb|EJF67124.1| GTP-binding protein RAB5 [Dichomitus squalens LYAD-421 SS1]
Length = 209
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 106/165 (64%), Gaps = 23/165 (13%)
Query: 74 FSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRA 132
AAF+TQTV L+D T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +A
Sbjct: 39 IGAAFLTQTVTLEDQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSTSLEKA 98
Query: 133 KSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGE 192
KSW++EL QR A PNIVIAL GNK DL ++RR V E +
Sbjct: 99 KSWIREL---------------------QRQADPNIVIALCGNKLDL-SARRQVSQEEAK 136
Query: 193 AYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRR 237
YAEE GL++ ETSAKT V++IF IAKKLP + +GG R
Sbjct: 137 KYAEEEGLMWGETSAKTGEGVSDIFTSIAKKLPLTAPPSARGGTR 181
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 35/39 (89%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIG 40
>gi|294654743|ref|XP_456809.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
gi|199429115|emb|CAG84784.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
Length = 221
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 98/164 (59%), Gaps = 28/164 (17%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + D TI++EIWDTAGQER+ +LAPMYYRNAQAA++VYDIT +F +A+ W
Sbjct: 44 AAFLTQKCTIGDRTIKYEIWDTAGQERFQSLAPMYYRNAQAALVVYDITKPASFIKARHW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLP-------TSRRCVEY 188
VKEL A +I IAL GNK DL S R V
Sbjct: 104 ---------------------VKELHEQASKDITIALVGNKYDLAENDNENEESLRKVSI 142
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG 232
EG+ AEE GLLF ETSAK++ NVN++FV I K+P N+G
Sbjct: 143 EEGKNLAEEEGLLFFETSAKSSYNVNDVFVGIGSKIPDTSANSG 186
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIG 43
>gi|340384939|ref|XP_003390968.1| PREDICTED: hypothetical protein LOC100636680, partial [Amphimedon
queenslandica]
Length = 424
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 105/171 (61%), Gaps = 22/171 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+++++ +D+ TI+F+IWD AGQERY +L PMYYRNA AAI+VYDITN+ +F + W
Sbjct: 260 ASFMSKSLTVDNSTIKFQIWDAAGQERYRSLLPMYYRNAAAAIVVYDITNEGSFTVLQDW 319
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
+ EL R + PPNIV+A+AGNK DL +R + +G+ YA
Sbjct: 320 IAELHR---------------------LGPPNIVLAIAGNKCDL-EDKREIPAEQGQTYA 357
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPK 246
E +F ETSA TA NV E+F+EI +KLP + + G L+ + P+
Sbjct: 358 SEVNAIFGETSALTARNVEEMFIEITRKLPPDCLTSLPVGASLLRQTDTPR 408
>gi|392579448|gb|EIW72575.1| hypothetical protein TREMEDRAFT_66953 [Tremella mesenterica DSM
1558]
Length = 246
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 109/224 (48%), Gaps = 67/224 (29%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ L++ ++FEIWDTAGQER+H+LAPMYYRNA AA++VYDIT + +AK
Sbjct: 44 IGAAFLTQRCRLENRIVKFEIWDTAGQERFHSLAPMYYRNAAAAVVVYDITKSASLEKAK 103
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--------PT---- 181
+WVKEL QR A PNI+IAL GNK DL PT
Sbjct: 104 AWVKEL---------------------QRQANPNIIIALVGNKLDLVSDTPSEPPTDGLE 142
Query: 182 ---------------------SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEI 220
R V +E E YA+E GLLF E SAK NVNE+F EI
Sbjct: 143 VERDEEDEETTPKPAEKTEEGDSRQVSIAEAETYAKECGLLFFEASAKVGTNVNEVFTEI 202
Query: 221 AKKLP-----KKEVNNGQGGRRLVETAEA--------PKTSNCC 251
AK +P K QG R+ AE K CC
Sbjct: 203 AKAIPLDTISPKPAAAAQGARKPATQAEGGVNLGEQQAKKGGCC 246
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 289 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
D+T K Q KLVLLGE+AVGKSSLVLRFV+ F+E TIG
Sbjct: 3 DETPMKAVQVKLVLLGEAAVGKSSLVLRFVQNDFNENTSPTIGA 46
>gi|400602159|gb|EJP69784.1| RAB GTPase Ypt5 [Beauveria bassiana ARSEF 2860]
Length = 220
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 117/201 (58%), Gaps = 39/201 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T ++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSFRESTIG---------AAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVI 170
YRNA A++VYDIT + +AK+WVK ELQR A NI+I
Sbjct: 90 YRNANCAVVVYDITQSASLDKAKAWVK---------------------ELQRQANENIII 128
Query: 171 ALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
ALAGNK DL T +R + +E EAYA+E GLLF ETSAKTA NV ++F IAKKLP
Sbjct: 129 ALAGNKLDLVTEQPDKRAIPTAEAEAYAKEAGLLFFETSAKTAENVPDLFTAIAKKLPLD 188
Query: 228 EVNNGQGGRRLVETAEAPKTS 248
Q G R + P S
Sbjct: 189 -----QAGPRHARPGQRPGVS 204
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+VLRFV+ QF ++ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGA 54
>gi|443895508|dbj|GAC72854.1| GTPase Rab5/YPT51 [Pseudozyma antarctica T-34]
Length = 321
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 100/175 (57%), Gaps = 50/175 (28%)
Query: 80 TQTVC-LDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKE 138
+Q C L+D I+FEIWDTAGQER+H+LAPMYYRNAQA+ ++YD+T
Sbjct: 122 SQQKCRLEDRLIKFEIWDTAGQERFHSLAPMYYRNAQASAVIYDVTK------------- 168
Query: 139 LQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-------PT---------- 181
+F +AKSWVKELQR A PNIVIAL GNK DL P+
Sbjct: 169 --------ASSFEKAKSWVKELQRQANPNIVIALVGNKIDLLNESSSSPSANADDNDDDD 220
Query: 182 -----------SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
S R V E EAYA+E+GLLF ETSAKT V E+F EIAKK+P
Sbjct: 221 ETATATPDAGDSLRAVPKDEAEAYAKESGLLFFETSAKTGEGVVEVFTEIAKKIP 275
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 23/29 (79%)
Query: 304 GESAVGKSSLVLRFVRGQFHEYQESTIGG 332
GE+AVGKSS+VLRFV+ F E +E TIG
Sbjct: 78 GEAAVGKSSVVLRFVQNDFQENKEPTIGA 106
>gi|215768963|dbj|BAH01192.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636110|gb|EEE66242.1| hypothetical protein OsJ_22419 [Oryza sativa Japonica Group]
Length = 200
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 97/151 (64%), Gaps = 22/151 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF +Q + +D+ T++ +IWDTAGQERYH+LAPMYYR A AA++VYDI++ D++ RA+ W
Sbjct: 40 AAFFSQVLIMDEATVKLDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISSTDSYIRARKW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V ELQR P++V+AL GNK DL R+ V E YA
Sbjct: 100 ---------------------VDELQRQGNPHLVMALVGNKVDLEEKRQ-VGTQEAMEYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
E NGL F+ETSAKT+ NV E+F E+A +L K
Sbjct: 138 ERNGLFFIETSAKTSQNVTELFYELADRLVK 168
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 301 VLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
VLLG+ GK+S+V+RF +G +++ QESTIG
Sbjct: 9 VLLGDLGAGKTSIVVRFAKGLYYDCQESTIGA 40
>gi|218198778|gb|EEC81205.1| hypothetical protein OsI_24236 [Oryza sativa Indica Group]
Length = 200
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 97/151 (64%), Gaps = 22/151 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF +Q + +D+ T++ +IWDTAGQERYH+LAPMYYR A AA++VYDI++ D++ RA+ W
Sbjct: 40 AAFFSQVLIMDEATVKLDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISSTDSYIRARKW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V ELQR P++V+AL GNK DL R+ V E YA
Sbjct: 100 ---------------------VDELQRQGNPHLVMALVGNKVDLEEKRQ-VGTQEAMEYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
E NGL F+ETSAKT+ NV E+F E+A +L K
Sbjct: 138 ERNGLFFIETSAKTSQNVTELFYELADRLVK 168
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 301 VLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
VLLG+ GK+S+V+RF +G +++ QESTIG
Sbjct: 9 VLLGDLGAGKTSIVVRFAKGLYYDCQESTIGA 40
>gi|354548461|emb|CCE45197.1| hypothetical protein CPAR2_702090 [Candida parapsilosis]
Length = 228
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 110/203 (54%), Gaps = 48/203 (23%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + D TI++EIWDTAGQER+ +LAPMYYRNAQAAI+VYDIT +F +A+ W
Sbjct: 46 AAFLTQKCTIGDRTIKYEIWDTAGQERFASLAPMYYRNAQAAIVVYDITKPASFVKARHW 105
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
VKEL A +I IAL GNK DL
Sbjct: 106 ---------------------VKELHEQASKDITIALVGNKYDLVEDEPEDGGNVGEGEG 144
Query: 180 --PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--------V 229
S R V EG+A A+E GLLF E SAKT+ NVNE+FV I +K+P
Sbjct: 145 GTSESLRKVSKEEGQALADEEGLLFFEASAKTSYNVNEVFVGIGEKIPDSNKQSGGNTAT 204
Query: 230 NNGQ-GGRRLVETAEAPKTSNCC 251
NNG+ G R+ + E K+S+ C
Sbjct: 205 NNGEVGENRIDLSVENRKSSSTC 227
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGA 46
>gi|71004772|ref|XP_757052.1| hypothetical protein UM00905.1 [Ustilago maydis 521]
gi|46096856|gb|EAK82089.1| hypothetical protein UM00905.1 [Ustilago maydis 521]
Length = 280
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 100/190 (52%), Gaps = 61/190 (32%)
Query: 76 AAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQD 127
AAF+T Q L+D I+FEIWDTAGQER+H+LAPMYYRNAQA+ ++YD+T
Sbjct: 66 AAFLTVSMSVSSIQKCRLEDRLIKFEIWDTAGQERFHSLAPMYYRNAQASAVIYDVTKAS 125
Query: 128 TFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-------- 179
+F +AKSWVKEL QR A PNIVIAL GNK DL
Sbjct: 126 SFEKAKSWVKEL---------------------QRQANPNIVIALVGNKIDLLNETSSSS 164
Query: 180 ------------------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNE 215
S R V E EAYA+E GLLF ETSAKT V E
Sbjct: 165 SANAETEDDDDDDTATTTPEATAAAESLRAVPKDEAEAYAKEAGLLFFETSAKTGEGVIE 224
Query: 216 IFVEIAKKLP 225
+F EIAKK+P
Sbjct: 225 VFTEIAKKIP 234
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNN 353
K Q KLVLLGE+AVGKSS+VLRFV+ F E +E TIG + S+S S K RL +
Sbjct: 28 KPFQTKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGAAFLTV-SMSVSSIQKCRLEDR 86
Query: 354 VPITFVW 360
+ +W
Sbjct: 87 LIKFEIW 93
>gi|392578003|gb|EIW71131.1| hypothetical protein TREMEDRAFT_27089 [Tremella mesenterica DSM
1558]
Length = 198
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 107/180 (59%), Gaps = 25/180 (13%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN--QDTFGRA 132
AAF+TQTV LD+ +I+FEIWDTAGQERY +LAP+Y+RN+ AA+I YDIT + +F +A
Sbjct: 40 AAFLTQTVSLDENTSIKFEIWDTAGQERYKSLAPIYFRNSNAAVIAYDITQPPETSFEKA 99
Query: 133 KSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGE 192
K WV+E LQR A P+IVI L GNK DL R+ GE
Sbjct: 100 KMWVRE---------------------LQRQADPSIVIMLVGNKTDLENQRKTPR-EMGE 137
Query: 193 AYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCCN 252
YA+E GLLF E SAKT V +F+EIA+KLP + G++ V + +T + C
Sbjct: 138 KYAQEEGLLFAEASAKTGEGVEALFMEIARKLPLHTPTPRKPGQQGVAVGKEEETPSACT 197
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
++ KLVLLGESAVGKSSLVLRFVR +F +++ESTI
Sbjct: 2 SRTTSSKLVLLGESAVGKSSLVLRFVRNEFSDFRESTIAA 41
>gi|393246972|gb|EJD54480.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 207
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 107/174 (61%), Gaps = 26/174 (14%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV L+D T++FEIWDTAGQERY APMYYRNA A++VYDIT + +A++
Sbjct: 41 AAFLTQTVQLEDQTTVKFEIWDTAGQERYK--APMYYRNANCAVVVYDITQSSSLEKART 98
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++E LQR A P+IVIAL GNK+DL +RR V E + Y
Sbjct: 99 WIRE---------------------LQRQADPSIVIALCGNKSDL-AARRQVTQEEAQKY 136
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP-KKEVNNGQGGRRLVETAEAPKT 247
AEE GL++ ETSAKT V +IF IAKKLP + +GG+ APK+
Sbjct: 137 AEEEGLMWGETSAKTGEGVADIFTAIAKKLPLTAPPSASRGGQARPAGGAAPKS 190
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|357454979|ref|XP_003597770.1| Ras-related protein Rab-5C [Medicago truncatula]
gi|355486818|gb|AES68021.1| Ras-related protein Rab-5C [Medicago truncatula]
Length = 229
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 7/185 (3%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF TQ + L + T++F+IWDTAGQERYH+LAPMYYR A AAI+VYDI++ DTF RAK W
Sbjct: 45 AAFFTQILSLSEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDISSIDTFVRAKKW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV-------EY 188
V+ELQR + A E +R +V + + L S + V +
Sbjct: 105 VQELQRHGSQKLVMALVANKCDLEPKREVETEVVFKSSSHPFPLFFSNKYVSVDVFGSDV 164
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTS 248
++GE +A+ENG+ +METSAKTA N+NE+F EI ++L + + G E +
Sbjct: 165 NDGEQFAQENGMFYMETSAKTAENINELFYEIGRRLARAFPSKPPGITLRNEIPGGGRKF 224
Query: 249 NCCNT 253
CC+T
Sbjct: 225 FCCST 229
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 284 IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ RP + KI Q KLVLLG+ GK+SL LRFV+GQF + QE TIG
Sbjct: 1 MSRPGN----KIIQAKLVLLGDMGTGKTSLALRFVKGQFFQNQEPTIGA 45
>gi|402221866|gb|EJU01934.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 260
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 99/194 (51%), Gaps = 63/194 (32%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA++VYDIT + +AK
Sbjct: 47 IGAAFLTQKCRLEDRVLRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDITKASSLEKAK 106
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR---------- 183
SWVKEL QR A PNIVIAL GNK DL S
Sbjct: 107 SWVKEL---------------------QRQANPNIVIALVGNKLDLVQSPAAAGAAPAGE 145
Query: 184 --------------------------------RCVEYSEGEAYAEENGLLFMETSAKTAM 211
R V E AYA+E GLLF ETSAKT
Sbjct: 146 EAEDEEADDATATPGEGGEQPLPEPEQEGESLRQVPKDEAAAYAQEAGLLFAETSAKTGE 205
Query: 212 NVNEIFVEIAKKLP 225
V E+F EIAKK+P
Sbjct: 206 GVVEVFTEIAKKIP 219
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K Q KLVLLGE+AVGKSS+V+RFV+ F E +E TIG
Sbjct: 11 KPVQVKLVLLGEAAVGKSSVVMRFVQNDFSENKEPTIGA 49
>gi|167832328|dbj|BAG09234.1| plant-unique Rab5 homolog [Physcomitrella patens subsp. patens]
Length = 226
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 98/143 (68%), Gaps = 23/143 (16%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
A+F++QT+ L D T ++FEIWDTAGQERY +LAP+YYR A AA++VYDITN +TF +A+
Sbjct: 66 ASFLSQTISLQDSTNVKFEIWDTAGQERYASLAPLYYRGAAAAVVVYDITNPETFLKAQF 125
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVK ELQ+ P+IV+AL GNKADL R V ++E +AY
Sbjct: 126 WVK---------------------ELQKHGNPDIVMALVGNKADLENERE-VSHAEAQAY 163
Query: 195 AEENGLLFMETSAKTAMNVNEIF 217
A+ NG+ F+ETSAKT+ NVN++F
Sbjct: 164 AKSNGMFFIETSAKTSENVNQLF 186
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+K + KLVLLG+S VGKS ++LRFVRGQF + T+G
Sbjct: 27 SKQIRIKLVLLGDSGVGKSCILLRFVRGQFDPSSKVTVGA 66
>gi|323449295|gb|EGB05184.1| hypothetical protein AURANDRAFT_70339 [Aureococcus anophagefferens]
Length = 182
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 102/176 (57%), Gaps = 35/176 (19%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ+V L+ T++FEIWDTAGQERY +LAPMYYR A AAI+VYDITN+++F AKSW
Sbjct: 42 AAFLTQSVSLEGATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNKESFNGAKSW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE LQR PN+VIALAGNKADLP R+ V +
Sbjct: 102 VKE---------------------LQRRGDPNVVIALAGNKADLPNKRKSVSST------ 134
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
TSAK+A NV +F EIA KLP+ + + ++ A + CC
Sbjct: 135 -------FTTSAKSATNVKSLFQEIALKLPQSPPQSEREAFPIIPPKHA-ENKTCC 182
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+++C +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 3 SRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 42
>gi|300175989|emb|CBK22206.2| unnamed protein product [Blastocystis hominis]
Length = 364
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 109/180 (60%), Gaps = 22/180 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF++QT+ +D+ ++F+IWDTAGQERYH+LAPMYYR A+ A+++YDIT++ TF RAK
Sbjct: 47 IGAAFLSQTIKIDNDIVKFDIWDTAGQERYHSLAPMYYRGAKGALVIYDITSRTTFARAK 106
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
+WV EL+ Q P++VIALAGNK DL +R V E
Sbjct: 107 NWVTELK--------------------QNSGNPDMVIALAGNKCDLAMNRE-VPKELAEE 145
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-KEVNNGQGGRRLVETAEAPKTSNCCN 252
YA+E+ +LFME SAKT N++ IF +A++LP+ + +V A A CCN
Sbjct: 146 YAKESNILFMEVSAKTKENIDLIFETLARRLPRTRTPVPSPTTTPVVAPAPAETKKGCCN 205
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
P D + ++ +YK+VLLGE+AVGKSS+V R+VR QF + QESTIG
Sbjct: 4 PQDLSGTQLFKYKIVLLGETAVGKSSIVQRYVRDQFLDNQESTIGA 49
>gi|255718227|ref|XP_002555394.1| KLTH0G08206p [Lachancea thermotolerans]
gi|238936778|emb|CAR24957.1| KLTH0G08206p [Lachancea thermotolerans CBS 6340]
Length = 212
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 107/192 (55%), Gaps = 38/192 (19%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V + D TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T +F +A+ W
Sbjct: 42 AAFLTQRVNMGDHTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--PTSRRCVEYSEGEA 193
VKEL+ A +I+IAL GNK D+ + R V E E
Sbjct: 102 ---------------------VKELREQASKDIIIALVGNKLDMVETGAERKVALEEAEN 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV---------------NNGQGGRRL 238
A + GLLF ETSAKT NVNE+F+ I +K+P K ++ + R
Sbjct: 141 LASQEGLLFFETSAKTGSNVNEVFLAIGQKIPLKSAQQQQQGQGSSGLRINDDSRVDLRA 200
Query: 239 VETAEAPKTSNC 250
+ AP + NC
Sbjct: 201 AQDGPAPSSCNC 212
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGEC------QSSHSISFSM 344
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG H+I F +
Sbjct: 5 LTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNMGDHTIKFEI 60
>gi|400601582|gb|EJP69225.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 232
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 99/175 (56%), Gaps = 36/175 (20%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT + +AK W
Sbjct: 48 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPTSLIKAKHW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR------------ 183
V E LQR A P IVIAL GNK DL +
Sbjct: 108 VAE---------------------LQRQASPGIVIALVGNKLDLASESASGDNGDDGDDS 146
Query: 184 ---RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG 235
R V E +AYAEE LLF ETSAKT +NV+E+F IA +P+ + + +G
Sbjct: 147 GDARKVPTDEAKAYAEEESLLFFETSAKTGVNVSEVFTAIANAIPETSLKSARGA 201
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|209880089|ref|XP_002141484.1| Ras family protein [Cryptosporidium muris RN66]
gi|209557090|gb|EEA07135.1| Ras family protein [Cryptosporidium muris RN66]
Length = 219
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 96/151 (63%), Gaps = 23/151 (15%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQ+V +DD ++FEIWDTAGQERY +LAPMYYR A AAI+VYDITN D+F AK
Sbjct: 48 AAFMTQSVNIDDDYIVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNSDSFDGAK- 106
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
SW+ EL+ + +IVIAL GNK DL R V Y
Sbjct: 107 --------------------SWISELKSINNNDIVIALVGNKCDLE-GNRTVSSEIARCY 145
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
A+EN +L++ETSAKT NV EIF EIA+KLP
Sbjct: 146 AKENDILYLETSAKTGHNVQEIFEEIARKLP 176
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K KLVLLG+++VGKS LV+RF + +F EYQE TIG
Sbjct: 10 KTYHLKLVLLGDASVGKSCLVVRFAKDEFSEYQEPTIGA 48
>gi|432092944|gb|ELK25302.1| Histone acetyltransferase KAT2B [Myotis davidii]
Length = 846
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 86/118 (72%), Gaps = 22/118 (18%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++F RAK+W
Sbjct: 55 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNW 114
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
VKEL QR A PNIVIAL+GNKADL ++R V++ E+
Sbjct: 115 VKEL---------------------QRQASPNIVIALSGNKADL-ANKRAVDFQAEES 150
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 47/64 (73%), Gaps = 9/64 (14%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
MAN + NG PN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QES
Sbjct: 1 MANRGATRPNG-------PN--TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQES 51
Query: 329 TIGG 332
TIG
Sbjct: 52 TIGA 55
>gi|149235389|ref|XP_001523573.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452982|gb|EDK47238.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 221
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 112/200 (56%), Gaps = 47/200 (23%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + D TI++EIWDTAGQER+ +LAPMYYRNAQAAI+VYDIT +F +A+ W
Sbjct: 45 AAFLTQKCTIGDRTIKYEIWDTAGQERFASLAPMYYRNAQAAIVVYDITKPASFIKARHW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR------------ 183
VKEL A N D I+IAL GNK DL
Sbjct: 105 VKELHEQA--NRD-------------------IIIALVGNKYDLVEDEPELESAAEGNTD 143
Query: 184 --RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG------QGG 235
R V EG+A A+E GLLF ETSAKT+ NVN++FV I K+P+ ++ G +GG
Sbjct: 144 LLRKVSKEEGQALADEEGLLFFETSAKTSYNVNDVFVAIGGKIPETNLSRGAQESTNEGG 203
Query: 236 RRLVETAEAPKT----SNCC 251
R ++ + P S CC
Sbjct: 204 R--IDLSTNPNAGATRSTCC 221
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGA 45
>gi|392597767|gb|EIW87089.1| GTP-binding protein RAB5 [Coniophora puteana RWD-64-598 SS2]
Length = 224
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 101/167 (60%), Gaps = 39/167 (23%)
Query: 76 AAFITQTVCLDD-VTIRFEIW----------------DTAGQERYHTLAPMYYRNAQAAI 118
AAF+TQTV LDD T++FEIW DTAGQERY +LAPMYYRNA A+
Sbjct: 41 AAFLTQTVTLDDQTTVKFEIWYVSNKSPATYSSIFDRDTAGQERYKSLAPMYYRNANCAV 100
Query: 119 IVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKAD 178
+VYDIT + +A++W++E LQR A P+IVIAL GNK D
Sbjct: 101 VVYDITQSASLEKARTWIRE---------------------LQRQADPSIVIALCGNKTD 139
Query: 179 LPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
L ++RR V E + YAEE GL++ ETSAK+ V+EIF IAKKLP
Sbjct: 140 L-SARRQVTQEEAQKYAEEEGLMWGETSAKSGEGVSEIFTAIAKKLP 185
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|255630597|gb|ACU15658.1| unknown [Glycine max]
Length = 204
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 98/148 (66%), Gaps = 23/148 (15%)
Query: 76 AAFITQTVCL-DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
A+F++QT+ L D T++FEIWDTAGQERY LAP+YYR A A+IVYDIT+ ++F +A+
Sbjct: 67 ASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFSKAQY 126
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVK ELQ+ P+IV+AL GNKADL +R V +G Y
Sbjct: 127 WVK---------------------ELQKHGSPDIVMALVGNKADL-LEKREVAVQDGTDY 164
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAK 222
AE+N + F+ETSAKTA N+NE+F EIAK
Sbjct: 165 AEKNDMFFIETSAKTADNINELFEEIAK 192
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 11/73 (15%)
Query: 283 RIQRPNDQT----QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE----- 333
++ RPN + AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 14 QLGRPNSENGGGQDAKDLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQT 73
Query: 334 --CQSSHSISFSM 344
Q S ++ F +
Sbjct: 74 IALQDSTTVKFEI 86
>gi|351721304|ref|NP_001236437.1| uncharacterized protein LOC100305769 [Glycine max]
gi|255626561|gb|ACU13625.1| unknown [Glycine max]
Length = 203
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 98/148 (66%), Gaps = 23/148 (15%)
Query: 76 AAFITQTVCL-DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
A+F++QT+ L D T++FEIWDTAGQERY LAP+YYR A A+IVYDIT+ ++F +A+
Sbjct: 67 ASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFSKAQY 126
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVK ELQ+ P+IV+AL GNKADL +R V +G Y
Sbjct: 127 WVK---------------------ELQKHGSPDIVMALVGNKADL-LEKREVAVQDGTDY 164
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAK 222
AE+NG+ F+ETSAKTA N+NE+F E+ K
Sbjct: 165 AEKNGMFFIETSAKTADNINELFEELPK 192
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 280 RGGR-IQRPNDQT----QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE- 333
RG R + RPN + AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 10 RGSRQLGRPNSENGGGQDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 69
Query: 334 ------CQSSHSISFSM 344
Q S ++ F +
Sbjct: 70 LSQTIALQDSTTVKFEI 86
>gi|328856662|gb|EGG05782.1| hypothetical protein MELLADRAFT_77996 [Melampsora larici-populina
98AG31]
Length = 277
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 100/173 (57%), Gaps = 23/173 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L+D I+FEIWDTAGQER+H+LAPMYYRNAQAA++ YD+T + +AKSW
Sbjct: 54 AAFLTQKCRLEDKVIKFEIWDTAGQERFHSLAPMYYRNAQAAVVAYDVTKSSSLDKAKSW 113
Query: 136 VKELQRMAPPN--IDTFGRAKSWVKEL----------------QRMAPPNIVIALAGNK- 176
VKELQR PN I G V++ A P+ AG+
Sbjct: 114 VKELQRQGNPNIVIALIGNKIDLVQQGSGSSSSGSSNGDDEADDATATPDNAAPAAGSSD 173
Query: 177 ----ADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
+S+R V E EAYA++ GLLF ETSAKT V E+F +IA K+P
Sbjct: 174 SNTNPSASSSKRQVSKDEAEAYAKDAGLLFFETSAKTGEGVVEVFTQIAAKIP 226
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 32/43 (74%)
Query: 290 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q ++ Q KLVLLGE+AVGKSS+VLRFV+ F E +E TIG
Sbjct: 12 QVDSRPVQVKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGA 54
>gi|441639329|ref|XP_003277577.2| PREDICTED: ras-related protein Rab-22A [Nomascus leucogenys]
Length = 250
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 96 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 155
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 156 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 193
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 194 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRQPSEPKRS-CC 250
>gi|255577452|ref|XP_002529605.1| protein with unknown function [Ricinus communis]
gi|223530938|gb|EEF32797.1| protein with unknown function [Ricinus communis]
Length = 224
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 112/190 (58%), Gaps = 42/190 (22%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ I A+F++QT+ L D T++FEIWDTAGQERY
Sbjct: 48 CIVLRFVRGQFDPTSKVTI---------GASFLSQTIALQDSTTVKFEIWDTAGQERYAA 98
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A+IVYDIT+ D+F +A+ WVK ELQ+
Sbjct: 99 LAPLYYRGAAVAVIVYDITSPDSFNKAQYWVK---------------------ELQKHGS 137
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P+IV+AL GNKADL +R V +G+ YAE+NG+ F+ETSAKTA N+N++F
Sbjct: 138 PDIVMALVGNKADLHDNRE-VPVQDGKEYAEKNGMFFIETSAKTADNINQLF-------- 188
Query: 226 KKEVNNGQGG 235
E GQGG
Sbjct: 189 --EPGFGQGG 196
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 10/63 (15%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
+ NNS++NG + AK + KLVLLG+S VGKS +VLRFVRGQF +
Sbjct: 15 LGGLNNSDNNGV----------SDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKV 64
Query: 329 TIG 331
TIG
Sbjct: 65 TIG 67
>gi|254573032|ref|XP_002493625.1| GTPase required for transport during endocytosis and for correct
sorting of vacuolar hydrolases [Komagataella pastoris
GS115]
gi|238033424|emb|CAY71446.1| GTPase required for transport during endocytosis and for correct
sorting of vacuolar hydrolases [Komagataella pastoris
GS115]
gi|328354547|emb|CCA40944.1| Ras-like GTP-binding protein YPT1 [Komagataella pastoris CBS 7435]
Length = 218
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 103/180 (57%), Gaps = 36/180 (20%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + D TI++EIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + KS+
Sbjct: 44 AAFLTQRCTIGDKTIKYEIWDTAGQERFQSLAPMYYRNAQAALVVYDVT------KPKSF 97
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS------------- 182
+K A+ WV EL A NI+IAL GNK D+ S
Sbjct: 98 IK---------------ARHWVNELHEQASKNIIIALCGNKYDIVESEDNDVSTENEDDD 142
Query: 183 --RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE 240
+R V EG+ A++ GLLF ETSAKT NVNE+F I K +P+ + G+ V+
Sbjct: 143 SRKRKVSVQEGQTLADDEGLLFFETSAKTGFNVNEVFTTIGKHIPEATSSENAAGQERVD 202
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 29/39 (74%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+I KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 6 QITAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGA 44
>gi|7767071|pdb|1EK0|A Chain A, Gppnhp-Bound Ypt51 At 1.48 A Resolution
Length = 170
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 96/154 (62%), Gaps = 23/154 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V +++ T++FEIWDTAGQER+ +LAP YYRNAQAA++VYD+T +F +A+ W
Sbjct: 38 AAFLTQRVTINEHTVKFEIWDTAGQERFASLAPXYYRNAQAALVVYDVTKPQSFIKARHW 97
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--PTSRRCVEYSEGEA 193
VKEL A +I+IAL GNK D R V EGE
Sbjct: 98 ---------------------VKELHEQASKDIIIALVGNKIDXLQEGGERKVAREEGEK 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
AEE GLLF ETSAKT NVN++F+ I +K+P K
Sbjct: 137 LAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLK 170
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS------SHSISFSM 344
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG + H++ F +
Sbjct: 1 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEI 56
>gi|241959174|ref|XP_002422306.1| GTP-binding protein, putative; vacuolar protein sorting-associated
protein, putative; vacuolar protein-targeting protein,
putative [Candida dubliniensis CD36]
gi|223645651|emb|CAX40312.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 106/193 (54%), Gaps = 38/193 (19%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + + TI++EIWDTAGQER+ +LAPMYYRNAQAA++VYDIT +F +A+ W
Sbjct: 45 AAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMYYRNAQAAVVVYDITKPASFIKARHW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--------PTSRRCVE 187
VKEL A N D I IAL GNK DL + R V
Sbjct: 105 VKELHEQA--NRD-------------------ITIALVGNKLDLVEDDSAEDGETLRKVS 143
Query: 188 YSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-----KEVNNGQGGRRLVETA 242
EG+ A+E GLLF ETSAKT NVNE+FV I K+P E GRR+ TA
Sbjct: 144 IEEGQTLADEEGLLFFETSAKTGNNVNEVFVGIGSKIPSVTVAGSEAQESSNGRRIDLTA 203
Query: 243 EAPKT----SNCC 251
+ S CC
Sbjct: 204 NTDDSNATRSTCC 216
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 29/43 (67%)
Query: 290 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q A KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 3 QHPAPATAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGA 45
>gi|449268714|gb|EMC79563.1| Ras-related protein Rab-17 [Columba livia]
Length = 214
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 107/180 (59%), Gaps = 26/180 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
+F TQT+ L+ T+RFEIWDTAGQE+YH++ +YYR A AA++VYDITN++T RAK W+
Sbjct: 54 SFFTQTLNLEVATVRFEIWDTAGQEKYHSVCHLYYRGAHAALLVYDITNKETLNRAKLWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
+L++ P IVIAL GNK DL ++R V EGE +A
Sbjct: 114 TDLEK--------------------EFLPDEIVIALVGNKTDL-AAKREVATEEGEEFAR 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG-----GRRLVETAEAPKTSNCC 251
GLLFMETSAK+ VN+IF+ IA++L ++E GR V+ ++ + CC
Sbjct: 153 TKGLLFMETSAKSNHQVNDIFMAIAQELLEREQEKASNPSPSRGRSAVDLGQSRVRTGCC 212
>gi|403282653|ref|XP_003932756.1| PREDICTED: ras-related protein Rab-22A [Saimiri boliviensis
boliviensis]
Length = 248
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 94 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 153
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 154 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 191
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 192 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRQPSEPKRS-CC 248
>gi|84998852|ref|XP_954147.1| Rab5 GTPase [Theileria annulata]
gi|65305145|emb|CAI73470.1| Rab5 GTPase, putative [Theileria annulata]
Length = 255
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 99/153 (64%), Gaps = 28/153 (18%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTV LDD ++FEIWDTAGQERY TLAPMYYR + AAIIVYDIT +D+F +AKSW
Sbjct: 72 AAFMTQTVKLDDCNVKFEIWDTAGQERYRTLAPMYYRGSAAAIIVYDITLKDSFDQAKSW 131
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVE-------Y 188
+KEL KS V+ PNI++ALAGNKADL + +
Sbjct: 132 IKEL--------------KSHVE-------PNIILALAGNKADLEDRKVDTDVRAFFNLL 170
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIA 221
+ + +A N LFMETSAKT NV+++F EIA
Sbjct: 171 TMVQDFASANNCLFMETSAKTGQNVHKLFTEIA 203
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 266 ILTMANSNNSNSNGRGGRIQRPNDQTQAK----ICQYKLVLLGESAVGKSSLVLRFVRGQ 321
I + NS S S G G+ + + +K + Q+KLV+LG+++VGKS LV RFV+
Sbjct: 2 IKELINSFVSPSEGGNGKESTNSSHSDSKSKNPVYQFKLVILGDASVGKSCLVGRFVKNT 61
Query: 322 FHEYQESTIGG 332
F E+QESTIG
Sbjct: 62 FMEFQESTIGA 72
>gi|340383021|ref|XP_003390016.1| PREDICTED: ras-related protein RHN1-like [Amphimedon queenslandica]
Length = 257
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 24/179 (13%)
Query: 70 YPYLFS--AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQD 127
Y Y FS + F +++ +D+ TI+F+IWDTAGQERY +L P+YYRNA AAI+VYDITN+
Sbjct: 80 YNYFFSGHSFFYVESLTVDNSTIKFQIWDTAGQERYRSLLPIYYRNAAAAIVVYDITNEG 139
Query: 128 TFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVE 187
+F + W+ EL R + PPNIV+A+AGNK DL +R +
Sbjct: 140 SFTVLQDWIAELHR---------------------LGPPNIVLAIAGNKCDL-EDKREIP 177
Query: 188 YSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPK 246
+G+ YA E +F ETSA TA NV E+F+EI +KLP + + G L+ + P+
Sbjct: 178 AEQGQTYASEVNAIFGETSAFTARNVEEMFIEITRKLPPDCLTSLPAGASLLRQTDTPR 236
>gi|50305705|ref|XP_452813.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641946|emb|CAH01664.1| KLLA0C13728p [Kluyveromyces lactis]
Length = 208
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 96/155 (61%), Gaps = 23/155 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V + D TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T +F +A+ W
Sbjct: 42 AAFLTQRVNMADHTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR--RCVEYSEGEA 193
VKEL A IVIAL GNK DL S R V E E
Sbjct: 102 ---------------------VKELHEQASKGIVIALVGNKMDLLESEEDRKVAKEEAEK 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
++E LLF ETSAKT NVNE+F+ I +K+P K+
Sbjct: 141 LSQEENLLFFETSAKTGDNVNEVFLAIGEKIPLKK 175
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGEC------QSSHSISFSM 344
+ + KLVLLGE+AVGKSS+VLRFV F E +E TIG + H+I F +
Sbjct: 3 SNVTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNMADHTIKFEI 60
>gi|355562999|gb|EHH19561.1| Ras-related protein Rab-22A, partial [Macaca mulatta]
gi|355784359|gb|EHH65210.1| Ras-related protein Rab-22A, partial [Macaca fascicularis]
Length = 188
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 34 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 93
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 94 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 131
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 132 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRQPSEPKRS-CC 188
>gi|410055384|ref|XP_001135766.3| PREDICTED: ras-related protein Rab-22A [Pan troglodytes]
Length = 230
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 76 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 135
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 136 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 173
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 174 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRQPSEPKRS-CC 230
>gi|390462760|ref|XP_003732900.1| PREDICTED: ras-related protein Rab-22A-like [Callithrix jacchus]
Length = 228
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 74 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 133
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 134 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 171
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 172 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRQPSEPKRS-CC 228
>gi|322694855|gb|EFY86674.1| Rab5-like protein ypt5 [Metarhizium acridum CQMa 102]
Length = 230
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 118/206 (57%), Gaps = 45/206 (21%)
Query: 54 KDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYR 112
KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMYYR
Sbjct: 51 KDQFDSFRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYR 101
Query: 113 NAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIAL 172
NA A+IVYDIT + +AK+WVKELQR A KE +I+IAL
Sbjct: 102 NANCAVIVYDITQSTSLDKAKAWVKELQRQA--------------KE-------DIIIAL 140
Query: 173 AGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV 229
AGNK DL T +R + ++ AYA E LLF ETSAKTA NV E+F IAK+LP
Sbjct: 141 AGNKLDLVTEQPDKRAIPTADAAAYAREANLLFFETSAKTAENVRELFTAIAKELPLD-- 198
Query: 230 NNGQGGRRLVETAE------APKTSN 249
Q G R + AP+T+N
Sbjct: 199 ---QAGPRHTRPGQRSGVSLAPETAN 221
>gi|348668632|gb|EGZ08456.1| hypothetical protein PHYSODRAFT_565187 [Phytophthora sojae]
Length = 200
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 104/160 (65%), Gaps = 25/160 (15%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F PY A+F+++ + ++D I+++IWDTAGQE+YH+LAPMYYR A AAI+VYDIT
Sbjct: 36 FRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITR 95
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ + K+WVK EL+++ P NIVIA+AGNK+DL +R
Sbjct: 96 KQSLTTLKNWVK---------------------ELKQLGPDNIVIAIAGNKSDL-EEKRE 133
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
V S+ AYAEE G LF+ETSAK NV+++F++I++ LP
Sbjct: 134 VPASQARAYAEEIGALFIETSAKEDTNVSDLFIQISQALP 173
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 289 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKN 348
D +K + K+VLLG++ VGKSSLVLRFV F Y ESTIG S + P K
Sbjct: 3 DAGNSKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKY 62
Query: 349 RL 350
++
Sbjct: 63 QI 64
>gi|156841129|ref|XP_001643940.1| hypothetical protein Kpol_1016p24 [Vanderwaltozyma polyspora DSM
70294]
gi|156114570|gb|EDO16082.1| hypothetical protein Kpol_1016p24 [Vanderwaltozyma polyspora DSM
70294]
Length = 211
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 113/201 (56%), Gaps = 39/201 (19%)
Query: 69 FYPYLFSAAFITQTVCLD--DVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
F AAF++Q++ LD D I+FEIWDTAGQERY +LAPMYYRNA AA++VYDIT
Sbjct: 31 FRESTIGAAFLSQSIKLDEDDTVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITAS 90
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSR 183
D+ +A+SWV+EL+ ++A +VI L GNK DL + +
Sbjct: 91 DSLSKAQSWVEELKN--------------------KVADDKLVICLVGNKLDLCQEDSGK 130
Query: 184 RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKK---------LPKKEVN---- 230
R VE S+ + YA+E GLLF E SAKT VN++F I + L K E N
Sbjct: 131 RSVEISDAKQYADEQGLLFFEVSAKTGEKVNDVFKSIGESLYSYKKEELLSKSEQNGTNT 190
Query: 231 NGQGGRRLVETAEAPKTSNCC 251
+GQ +L + A + TS CC
Sbjct: 191 HGQVDLQLQKPATSDPTS-CC 210
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGA 38
>gi|348552524|ref|XP_003462077.1| PREDICTED: ras-related protein Rab-22A-like [Cavia porcellus]
Length = 194
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRPPSEPKRS-CC 194
>gi|342876816|gb|EGU78372.1| hypothetical protein FOXB_11123 [Fusarium oxysporum Fo5176]
Length = 225
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 112/206 (54%), Gaps = 44/206 (21%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMY 110
++KD+ D + I AAF+TQT+ LD+ T++FEIWDTAGQERY +LAPMY
Sbjct: 39 FVKDQFDSYRESTIG---------AAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMY 89
Query: 111 YRNAQAAIIVYD-----ITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
YRNA A+I I Q + +AK+WVK ELQR A
Sbjct: 90 YRNANCAVIYNHHRAMLIFLQASLDKAKAWVK---------------------ELQRQAN 128
Query: 166 PNIVIALAGNKADLPT---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAK 222
NIVIALAGNK DL T +R + ++ EAYA E GLLF ETSAKTA NV +F IAK
Sbjct: 129 ENIVIALAGNKLDLVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVQTLFTAIAK 188
Query: 223 KLPKKEVNNGQGGRRLVETAEAPKTS 248
KLP Q G R + P S
Sbjct: 189 KLPLD-----QAGPRHARPGQRPGVS 209
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
T + Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 13 TNTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 54
>gi|302563975|ref|NP_001180746.1| ras-related protein Rab-22A [Macaca mulatta]
gi|297707438|ref|XP_002830512.1| PREDICTED: ras-related protein Rab-22A [Pongo abelii]
gi|397469142|ref|XP_003806222.1| PREDICTED: ras-related protein Rab-22A [Pan paniscus]
gi|402882151|ref|XP_003904614.1| PREDICTED: ras-related protein Rab-22A [Papio anubis]
gi|426392268|ref|XP_004062478.1| PREDICTED: ras-related protein Rab-22A [Gorilla gorilla gorilla]
gi|380788255|gb|AFE66003.1| ras-related protein Rab-22A [Macaca mulatta]
gi|383420237|gb|AFH33332.1| ras-related protein Rab-22A [Macaca mulatta]
gi|410220672|gb|JAA07555.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410260092|gb|JAA18012.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410298900|gb|JAA28050.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410335379|gb|JAA36636.1| RAB22A, member RAS oncogene family [Pan troglodytes]
Length = 194
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRQPSEPKRS-CC 194
>gi|353236709|emb|CCA68698.1| probable VPS21-Rab5-like GTPase involved in vacuolar protein
sorting [Piriformospora indica DSM 11827]
Length = 252
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 101/190 (53%), Gaps = 59/190 (31%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA++VYDIT +A
Sbjct: 46 IGAAFLTQKCRLEDRVLRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDIT------KAA 99
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT------------ 181
S +AKSWVKELQR A PNIVIALAGNK DL T
Sbjct: 100 S---------------LEKAKSWVKELQRQANPNIVIALAGNKLDLVTGQASTPGTSAAA 144
Query: 182 --------------------------SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNE 215
S R V E AYA E GLLF E SAKT + E
Sbjct: 145 SSADDEDEADDATATPGETEEEAGSESLRQVPKDEAMAYATEAGLLFTEISAKTGEGIVE 204
Query: 216 IFVEIAKKLP 225
+F +IAKK+P
Sbjct: 205 LFTDIAKKIP 214
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 288 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+D TQ I Q KLVLLGE+AVGKSS+V+RFV +F +E TIG
Sbjct: 5 SDATQKPI-QVKLVLLGEAAVGKSSVVMRFVNNEFQANKEPTIGA 48
>gi|340384640|ref|XP_003390819.1| PREDICTED: ras-related protein Rab-22A-like, partial [Amphimedon
queenslandica]
Length = 165
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 105/171 (61%), Gaps = 22/171 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+++++ +D+ TI+F+IWDTAGQERY +L PMYYRNA AAI+VYDITN+ +F + W
Sbjct: 1 ASFMSKSLTVDNSTIKFQIWDTAGQERYRSLLPMYYRNAAAAIVVYDITNEGSFTVLQDW 60
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
+ E L R+ P NIV+A+AGNK DL +R + +G+ YA
Sbjct: 61 IAE---------------------LHRLGPSNIVLAIAGNKCDL-EDKREIPAEQGQTYA 98
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPK 246
E +F ETSA TA NV E+F+EI +KLP + + G L+ + P+
Sbjct: 99 SEVNAIFGETSALTARNVEEMFIEITRKLPPDCLTSLPAGASLLRQTDTPR 149
>gi|10636479|emb|CAC10538.1| GTP-binding protein RAB22A [Homo sapiens]
Length = 194
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L + PK S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGFKLRKQPSEPKRS-CC 194
>gi|397525605|ref|XP_003832751.1| PREDICTED: ras-related protein Rab-22A-like [Pan paniscus]
Length = 219
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 65 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 124
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 125 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 162
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 163 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRQPSEPKRS-CC 219
>gi|345328282|ref|XP_001510989.2| PREDICTED: ras-related protein Rab-22A-like [Ornithorhynchus
anatinus]
Length = 241
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 87 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 146
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 147 V---------------------KELRQHGPPNIVVAIAGNKCDLIDVREVME-KDAKDYA 184
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N G+ +L A PK S CC
Sbjct: 185 DSIHAIFVETSAKNAININELFIEISRRIPSTDTNPPSSGKGFKLRRQATVPKRS-CC 241
>gi|10190714|ref|NP_065724.1| ras-related protein Rab-22A [Homo sapiens]
gi|13633614|sp|Q9UL26.2|RB22A_HUMAN RecName: Full=Ras-related protein Rab-22A; Short=Rab-22
gi|9961232|gb|AAF00047.2|AF091034_1 GTP-binding protein RAB22A [Homo sapiens]
gi|16041684|gb|AAH15710.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|30582931|gb|AAP35695.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|39645547|gb|AAH63457.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|61361041|gb|AAX41977.1| RAB22A member RAS oncogene family [synthetic construct]
gi|119595902|gb|EAW75496.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595903|gb|EAW75497.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|193787092|dbj|BAG52298.1| unnamed protein product [Homo sapiens]
gi|208967238|dbj|BAG73633.1| RAB22A, member RAS oncogene family [synthetic construct]
Length = 194
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGFKLRRQPSEPKRS-CC 194
>gi|30583895|gb|AAP36196.1| Homo sapiens RAB22A, member RAS oncogene family [synthetic
construct]
gi|61370724|gb|AAX43543.1| RAB22A member RAS oncogene family [synthetic construct]
gi|61370733|gb|AAX43544.1| RAB22A member RAS oncogene family [synthetic construct]
Length = 195
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGFKLRRQPSEPKRS-CC 194
>gi|301116125|ref|XP_002905791.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262109091|gb|EEY67143.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 200
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 114/194 (58%), Gaps = 40/194 (20%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F PY A+F+++ + ++D I+++IWDTAGQE+YH+LAPMYYR A AAI+VYDIT
Sbjct: 36 FRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITR 95
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ + K+WVK EL+++ P NIVIA+AGNK+DL +R
Sbjct: 96 KQSLTTLKNWVK---------------------ELKQLGPDNIVIAIAGNKSDL-EEKRE 133
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK--------EVNNGQGGRR 237
V S+ AYA E G LF+ETSAK NV+++F++I++ LP E+ + GG +
Sbjct: 134 VPASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQALPTASAESNALPEIVDPYGGGK 193
Query: 238 LVETAEAPKTSNCC 251
K+S CC
Sbjct: 194 -------KKSSGCC 200
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 289 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKN 348
D +K + K+VLLG++ VGKSSLVLRFV F Y ESTIG S + P K
Sbjct: 3 DAGNSKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKY 62
Query: 349 RL 350
++
Sbjct: 63 QI 64
>gi|357117431|ref|XP_003560472.1| PREDICTED: ras-related protein Rab5-like [Brachypodium distachyon]
Length = 205
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 105/175 (60%), Gaps = 34/175 (19%)
Query: 75 SAAFITQTVCL-------DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQD 127
AAF +Q + + ++ T+RF+IWDTAGQERYH+LAPMYYR A AA++VYDIT+ D
Sbjct: 42 GAAFFSQALAVRSGGAGGEEDTVRFDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSTD 101
Query: 128 TFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVE 187
++ RAK W + ELQR P++V+AL GNK DL R+ +
Sbjct: 102 SYIRAKKW---------------------IDELQRQGNPHLVMALVGNKVDLEEKRQ-IR 139
Query: 188 YSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG-----GRR 237
E YAE NGL F+ETSAKTA +++E+F E+A++L K N G GRR
Sbjct: 140 TQEALEYAERNGLFFVETSAKTAHHISELFYELAQRLVKVRPNRPAGMILHEGRR 194
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+ Q KLVLLG+ GK+S+V+RF +G +++ QESTIG
Sbjct: 6 VIQAKLVLLGDLGAGKTSIVVRFAKGLYYDCQESTIG 42
>gi|358398111|gb|EHK47469.1| hypothetical protein TRIATDRAFT_298602 [Trichoderma atroviride IMI
206040]
Length = 229
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 97/174 (55%), Gaps = 36/174 (20%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT + +A+ W
Sbjct: 45 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPTSLVKARHW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLP--------------- 180
V E LQR A P IVIAL GNK DL
Sbjct: 105 VAE---------------------LQRQASPGIVIALVGNKLDLAGESQSTSEEGDGEDG 143
Query: 181 TSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R V E ++YAEE GLLF ETSAKT NV E+F IA +P+ + + +G
Sbjct: 144 GDARKVPTEEAQSYAEEEGLLFFETSAKTGHNVTEVFTAIANAIPETSLKSTRG 197
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 44
>gi|385302406|gb|EIF46539.1| rab gtpase [Dekkera bruxellensis AWRI1499]
Length = 208
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 102/170 (60%), Gaps = 23/170 (13%)
Query: 69 FYPYLFSAAFITQTVCLD-DVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQD 127
F AAF+TQT+ LD D T++FEIWDTAGQERY +LA +YYRNAQ+A++VYDIT +
Sbjct: 42 FKESTIGAAFLTQTIDLDSDTTVKFEIWDTAGQERYRSLASIYYRNAQSALVVYDITQKA 101
Query: 128 TFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVE 187
+ +AK W+K ELQ+ A NIVIAL GNK DL R+ +
Sbjct: 102 SLDKAKYWIK---------------------ELQKQASNNIVIALVGNKTDLEEERQ-IP 139
Query: 188 YSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRR 237
E +A+A E GLLF E SAK+ + + F EIA K+P +E + R+
Sbjct: 140 TEEAQAFANEAGLLFFEVSAKSGKGIKDCFREIALKMPIEETLKRRRDRK 189
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 33/39 (84%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K Q+KLVLLGESAVGKSS+V RFV+ F++++ESTIG
Sbjct: 11 KFVQFKLVLLGESAVGKSSIVQRFVKDSFNDFKESTIGA 49
>gi|346319675|gb|EGX89276.1| Rab5-like protein ypt51 [Cordyceps militaris CM01]
Length = 233
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 100/185 (54%), Gaps = 36/185 (19%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT + +AK W
Sbjct: 48 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPTSLIKAKHW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR------------ 183
V E LQR A P IVIAL GNK DL +
Sbjct: 108 VAE---------------------LQRQASPGIVIALVGNKLDLASESAGGDNGDDGDDS 146
Query: 184 ---RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE 240
R V E + YAE+ LLF ETSAKT +NV E+F IA +P+ + + +G
Sbjct: 147 GDARKVPTEEAKTYAEDESLLFFETSAKTGVNVTEVFTAIANAIPETSLKSARGAGTTNN 206
Query: 241 TAEAP 245
TA P
Sbjct: 207 TASRP 211
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|409051991|gb|EKM61467.1| hypothetical protein PHACADRAFT_248102 [Phanerochaete carnosa
HHB-10118-sp]
Length = 208
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 104/161 (64%), Gaps = 23/161 (14%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV L+D T ++FEIWDTAGQERY + APMYYRNA A++VYDIT + +A+S
Sbjct: 41 AAFLTQTVALEDGTSVKFEIWDTAGQERYKSSAPMYYRNANCAVVVYDITQSASLEKARS 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++E LQR A P+I+IAL GNK+DL RR V E + Y
Sbjct: 101 WIRE---------------------LQRQADPSIIIALCGNKSDLAV-RRQVSQEEAKKY 138
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG 235
AEE GL++ ETSAK+ VNEIF EIAKKLPK + + G
Sbjct: 139 AEEEGLMWGETSAKSGEGVNEIFTEIAKKLPKTAPPSARAG 179
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 35/39 (89%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIG 40
>gi|168014172|ref|XP_001759627.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162689166|gb|EDQ75539.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|167832326|dbj|BAG09233.1| plant-unique Rab5 homolog [Physcomitrella patens subsp. patens]
Length = 208
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 100/152 (65%), Gaps = 23/152 (15%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
A+F++QT+ L D T ++FEIWDTAGQERY +LAP+YYR A AA++VYDITN +TF +A+
Sbjct: 67 ASFLSQTITLKDSTSVKFEIWDTAGQERYASLAPLYYRGAAAAVVVYDITNPETFLKAQF 126
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVK ELQ+ P+IV+AL GNKADL R V E + Y
Sbjct: 127 WVK---------------------ELQKHGNPDIVMALVGNKADLEYQRE-VTREEAQTY 164
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
A+ NG+ ++ETSAKT+ NVN++F ++ KL +
Sbjct: 165 ADSNGMFYIETSAKTSDNVNQLFEQLHGKLKQ 196
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQ---AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 325
M +++S++ G R + + QT+ +K + KLVLLG+S VGKS +VLRFVRGQF
Sbjct: 1 MGCTSSSHAAVHGSRNLQTHSQTEVLDSKNLRIKLVLLGDSGVGKSCIVLRFVRGQFDPS 60
Query: 326 QESTIGG 332
+ T+G
Sbjct: 61 SKVTVGA 67
>gi|336469296|gb|EGO57458.1| hypothetical protein NEUTE1DRAFT_146066 [Neurospora tetrasperma
FGSC 2508]
gi|350291070|gb|EGZ72284.1| Rab5-like protein ypt51 [Neurospora tetrasperma FGSC 2509]
Length = 236
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 98/179 (54%), Gaps = 41/179 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 47 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR------------ 183
V E LQR A P IVIAL GNK DL +
Sbjct: 107 VAE---------------------LQRQASPGIVIALVGNKLDLTSDSAGSAEVSGGGDD 145
Query: 184 --------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R + E +AYAEE GLLF ETSAKT NV E+F IA +P+ + + +G
Sbjct: 146 NAEDSGDARKISTDEAKAYAEEEGLLFFETSAKTGHNVTEVFTAIANAIPETSLKSARG 204
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 46
>gi|85076611|ref|XP_955952.1| Rab5-like protein ypt51 [Neurospora crassa OR74A]
gi|28916987|gb|EAA26716.1| Rab5-like protein ypt51 [Neurospora crassa OR74A]
Length = 236
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 98/179 (54%), Gaps = 41/179 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 47 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR------------ 183
V E LQR A P IVIAL GNK DL +
Sbjct: 107 VAE---------------------LQRQASPGIVIALVGNKLDLTSDSAGSAEASGGGDD 145
Query: 184 --------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R + E +AYAEE GLLF ETSAKT NV E+F IA +P+ + + +G
Sbjct: 146 NAEDSGDARKISTDEAKAYAEEEGLLFFETSAKTGHNVTEVFTAIANAIPETSLKSARG 204
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 46
>gi|301759461|ref|XP_002915568.1| PREDICTED: ras-related protein Rab-22A-like [Ailuropoda
melanoleuca]
Length = 194
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L P+ S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSADTNPPSGGKGFKLRRQPSEPQRS-CC 194
>gi|18568105|gb|AAL75941.1|AF125104_1 RAB22 [Homo sapiens]
Length = 194
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 108/177 (61%), Gaps = 24/177 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNC 250
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK + C
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGFKLRRQPSEPKRTAC 194
>gi|399217553|emb|CCF74440.1| unnamed protein product [Babesia microti strain RI]
Length = 226
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 25/171 (14%)
Query: 59 CMTQIVINVVFYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQ 115
C+T VF Y S AAF+T+T+ L+ ++FEIWDTAGQERY +LAPMYYR A
Sbjct: 62 CLTTRFCKDVFLDYQDSTIGAAFMTKTINLESSVVKFEIWDTAGQERYRSLAPMYYRGAS 121
Query: 116 AAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGN 175
AA+IVYDIT+ DTF +A+SW+ EL+ ++ RA +++IALAGN
Sbjct: 122 AALIVYDITSADTFEQARSWINELKAVS--------RA-------------DVIIALAGN 160
Query: 176 KADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
K DL + R V+ + +A+ N LFMETSAKT NV E+F++IA LP+
Sbjct: 161 KVDLERN-RSVDIETAQNFAKLNNCLFMETSAKTGHNVQEMFMKIANLLPR 210
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
QYKLVLLGE+AVGKS L RF + F +YQ+STIG
Sbjct: 47 QYKLVLLGETAVGKSCLTTRFCKDVFLDYQDSTIGA 82
>gi|401827320|ref|XP_003887752.1| Rab5-like GTPase [Encephalitozoon hellem ATCC 50504]
gi|392998759|gb|AFM98771.1| Rab5-like GTPase [Encephalitozoon hellem ATCC 50504]
Length = 197
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 105/163 (64%), Gaps = 22/163 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +I+FEIWDTAGQERY++L PMYYR AQ A+IVYDIT+ ++F AK W
Sbjct: 47 ASFLTKTVFTQEGSIKFEIWDTAGQERYNSLIPMYYRGAQVALIVYDITSAESFETAKRW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+EL F + K ++K L GNK+DL + RR VEY +G+ YA
Sbjct: 107 VEEL---------GFEKPKEFIK------------VLIGNKSDLESDRR-VEYQQGKEYA 144
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRL 238
+ + LLF E+SAKT + EIF IA+++PK+EV G RL
Sbjct: 145 DSHNLLFFESSAKTGKGIAEIFNAIAERVPKEEVKKKVRGFRL 187
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS------SHSI 340
P + K +K+V+LG +VGKSSLVL++V+G+F+ +ESTIG + SI
Sbjct: 2 PGLKENMKTYTFKVVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTVFTQEGSI 61
Query: 341 SFSM---PTKNRLNNNVPITF 358
F + + R N+ +P+ +
Sbjct: 62 KFEIWDTAGQERYNSLIPMYY 82
>gi|320580341|gb|EFW94564.1| GTPase [Ogataea parapolymorpha DL-1]
Length = 849
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 108/175 (61%), Gaps = 25/175 (14%)
Query: 76 AAFITQTVCLD-DVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQT+ +D + T++FEIWDTAGQERY +LA MYYRNAQAA++V+DIT + + +AK
Sbjct: 690 AAFLTQTIQIDANTTVKFEIWDTAGQERYRSLASMYYRNAQAALVVFDITQESSLDKAKY 749
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W+KELQ+ A + G IVIAL GNK DL R+ + E +A+
Sbjct: 750 WIKELQKQA-----SSG----------------IVIALVGNKLDLEEERK-ISKDEAQAF 787
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGRRLVETAEAPKT 247
A E GL++ E SAKT V + F +IA KLP +E GQ RR V+ + P T
Sbjct: 788 ANELGLMYAEVSAKTGEKVKDCFKDIALKLPLEEKLSQQGQRRRRTVDLNQRPST 842
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 303 LGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
LGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 661 LGESAVGKSSIVHRFVKDSFTDSRESTIGA 690
>gi|303390262|ref|XP_003073362.1| Rab5-like GTPase [Encephalitozoon intestinalis ATCC 50506]
gi|303302508|gb|ADM12002.1| Rab5-like GTPase [Encephalitozoon intestinalis ATCC 50506]
Length = 197
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 22/163 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +I+FEIWDTAGQERY++L PMYYR AQ A+IVYDIT+ ++F AK W
Sbjct: 47 ASFLTKTVFTPEGSIKFEIWDTAGQERYNSLIPMYYRGAQVALIVYDITSVESFETAKRW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+EL +F + + ++K L GNK+DL R+ VE+ +G+ YA
Sbjct: 107 VEEL---------SFEKPREFIK------------VLIGNKSDLEEDRK-VEFQQGKEYA 144
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRL 238
+ LLF E+SAKT N+ EIF IA+K+PK+EV G RL
Sbjct: 145 DSQNLLFFESSAKTGKNIAEIFNAIAEKVPKEEVKKNTKGFRL 187
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS------SHSI 340
P + K +K+V+LG +VGKSSLVL++V+G+F+ +ESTIG + SI
Sbjct: 2 PGIKEDMKTYTFKMVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTVFTPEGSI 61
Query: 341 SFSM---PTKNRLNNNVPITF 358
F + + R N+ +P+ +
Sbjct: 62 KFEIWDTAGQERYNSLIPMYY 82
>gi|281348435|gb|EFB24019.1| hypothetical protein PANDA_003579 [Ailuropoda melanoleuca]
Length = 185
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 31 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 90
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 91 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 128
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L P+ S CC
Sbjct: 129 DSIHAIFVETSAKNAININELFIEISRRIPSADTNPPSGGKGFKLRRQPSEPQRS-CC 185
>gi|392570863|gb|EIW64035.1| GTP-binding protein RAB5 [Trametes versicolor FP-101664 SS1]
Length = 209
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 104/161 (64%), Gaps = 23/161 (14%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV L+D T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +AKS
Sbjct: 41 AAFLTQTVTLEDSTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSTSLEKAKS 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++E LQR A P+IVIAL GNK DL +RR V E + Y
Sbjct: 101 WIRE---------------------LQRQADPSIVIALCGNKLDL-AARRQVSQEEAKKY 138
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG 235
AEE GL++ ETSAK+ V+EIF IAKKLP + +GG
Sbjct: 139 AEEEGLMWGETSAKSGEGVSEIFNAIAKKLPLTAAPSARGG 179
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 35/39 (89%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIG 40
>gi|50978970|ref|NP_001003208.1| ras-related protein Rab-22A [Canis lupus familiaris]
gi|3256092|emb|CAA80473.1| Rab22a protein [Canis lupus familiaris]
Length = 194
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L P+ S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSADANPPSGGKGFKLRRQPSEPQRS-CC 194
>gi|325188437|emb|CCA22973.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 198
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 105/160 (65%), Gaps = 25/160 (15%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F PY A+F+++ + +++ I+++IWDTAGQE+YH+LAPMYYR A AAI+VYDIT
Sbjct: 35 FRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITR 94
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ + K+WVK EL+++ P NIVIA+AGNK+DL +R
Sbjct: 95 KQSLATLKNWVK---------------------ELKQLGPENIVIAIAGNKSDL-EDKRE 132
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
V ++ +AYA+E G LF+ETSAK NV+++F+ I+K+LP
Sbjct: 133 VPSAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQLP 172
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%)
Query: 290 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNR 349
+ Q K + K+VLLG++ VGKSSLVLRFV F Y ESTIG S + + P K +
Sbjct: 3 ENQVKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQ 62
Query: 350 L 350
+
Sbjct: 63 I 63
>gi|148747177|ref|NP_077756.2| ras-related protein Rab-22A [Mus musculus]
gi|46577691|sp|P35285.2|RB22A_MOUSE RecName: Full=Ras-related protein Rab-22A; Short=Rab-22; AltName:
Full=Rab-14
gi|13879258|gb|AAH06596.1| RAB22A, member RAS oncogene family [Mus musculus]
gi|14422309|emb|CAC41378.1| RAB22A protein [Mus musculus]
gi|26327515|dbj|BAC27501.1| unnamed protein product [Mus musculus]
gi|74144602|dbj|BAE27289.1| unnamed protein product [Mus musculus]
gi|74151840|dbj|BAE29707.1| unnamed protein product [Mus musculus]
gi|112293001|dbj|BAF02878.1| Rab22A [Mus musculus]
gi|148674704|gb|EDL06651.1| RAB22A, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 194
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V +EL++ PP+IV+A+AGNK DL R +E + + YA
Sbjct: 100 V---------------------RELRQHGPPSIVVAIAGNKCDLTDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPASGGKGFKLRRQPSEPKRS-CC 194
>gi|375152082|gb|AFA36499.1| small GTP-binding protein, partial [Lolium perenne]
Length = 188
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 112/181 (61%), Gaps = 32/181 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVTI-RFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L+D TI +FEIWDTAGQERY
Sbjct: 35 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTLALEDSTIVKFEIWDTAGQERYAA 85
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A AAII YDITN ++F +A+ W VKELQ+
Sbjct: 86 LAPLYYRGAAAAIIAYDITNPESFKKAQYW---------------------VKELQKHGN 124
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
I++ L GNKADL S R V + + YAE+N +LFMETSAKTA N+N++F EIAK+LP
Sbjct: 125 SGIIVVLVGNKADLHES-RSVASQDAQEYAEKNSMLFMETSAKTADNINQVFKEIAKRLP 183
Query: 226 K 226
K
Sbjct: 184 K 184
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 284 IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
I + T + + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 7 IDGSSSATDSNELRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 55
>gi|126302779|ref|XP_001368849.1| PREDICTED: ras-related protein Rab-22A-like [Monodelphis domestica]
gi|395506750|ref|XP_003757693.1| PREDICTED: ras-related protein Rab-22A [Sarcophilus harrisii]
Length = 194
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 108/178 (60%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N G+ +L PK S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDTNPSSSGKGFKLRRQPSEPKRS-CC 194
>gi|171686920|ref|XP_001908401.1| hypothetical protein [Podospora anserina S mat+]
gi|170943421|emb|CAP69074.1| unnamed protein product [Podospora anserina S mat+]
Length = 231
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 96/175 (54%), Gaps = 37/175 (21%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 47 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR------------ 183
V E LQR A P IVIAL GNK DL
Sbjct: 107 VAE---------------------LQRQASPGIVIALVGNKLDLTNDSAGGDGEGAGVGD 145
Query: 184 ----RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R V E ++YAEE GLLF ETSAKT NV E+F IA +P+ + +G
Sbjct: 146 GEDARKVTTEEAKSYAEEEGLLFFETSAKTGYNVTEVFTAIANAIPETSLKTARG 200
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 47
>gi|67537490|ref|XP_662519.1| hypothetical protein AN4915.2 [Aspergillus nidulans FGSC A4]
gi|40741803|gb|EAA60993.1| hypothetical protein AN4915.2 [Aspergillus nidulans FGSC A4]
gi|259482217|tpe|CBF76488.1| TPA: RAB GTPase Vps21/Ypt51, putative (AFU_orthologue;
AFUA_3G10740) [Aspergillus nidulans FGSC A4]
Length = 258
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 98/192 (51%), Gaps = 54/192 (28%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 50 AAFLTQKCSLPSRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPSSLTKAKHW 109
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
V E LQR A P IVIAL GNK DL
Sbjct: 110 VAE---------------------LQRQASPGIVIALVGNKLDLTNDGGETPAETEREAG 148
Query: 180 -----------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAK 222
P R V E YA+E GLLF ETSAKT +NV ++F IA
Sbjct: 149 TEGDDADDNQEEQEDNTPGDARKVPTREASTYADEEGLLFFETSAKTGLNVTDVFTAIAN 208
Query: 223 KLPKKEVNNGQG 234
+P+ + +G+G
Sbjct: 209 AIPESSLKSGRG 220
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 49
>gi|178056610|ref|NP_001116646.1| ras-related protein Rab-22A [Sus scrofa]
gi|147225162|emb|CAN13146.1| RAB22A, member RAS oncogene family [Sus scrofa]
Length = 194
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVLE-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + + GG+ +L PK S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDASPPSGGKGFKLRRQPSEPKRS-CC 194
>gi|126139533|ref|XP_001386289.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
gi|126093571|gb|ABN68260.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
Length = 215
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 96/157 (61%), Gaps = 27/157 (17%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + + TI++EIWDTAGQER+ +LAPMYYRNAQAAI+VYDIT +F +A+ W
Sbjct: 44 AAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMYYRNAQAAIVVYDITKPASFIKARHW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL------PTSRRCVEYS 189
VKEL A +I IAL GNK DL S R V
Sbjct: 104 ---------------------VKELHEQASKDITIALVGNKYDLVEDDTEEESLRKVSVE 142
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
EG+ AEE GLLF ETSAKT+ NVN++F+ I K+P+
Sbjct: 143 EGKGLAEEEGLLFFETSAKTSYNVNDVFIGIGSKIPE 179
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGA 44
>gi|396081874|gb|AFN83488.1| Rab5-like GTPase [Encephalitozoon romaleae SJ-2008]
Length = 197
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 104/163 (63%), Gaps = 22/163 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+T+ + +I+FEIWDTAGQERY++L PMYYR AQ A+I YDIT+ ++F AK W
Sbjct: 47 ASFLTKTIFTQEGSIKFEIWDTAGQERYNSLIPMYYRGAQVALIAYDITSMESFETAKRW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+EL +F + K ++K L GNK+DL + R+ VEY +G+ YA
Sbjct: 107 VEEL---------SFEKPKEFIK------------VLIGNKSDLESDRK-VEYQKGKEYA 144
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRL 238
+ LLF E+SAKT N+ EIF IA+++PK+E G RL
Sbjct: 145 DSQNLLFFESSAKTGKNIAEIFNAIAERVPKEEAKKKTKGFRL 187
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS------SHSI 340
P + K +K+V+LG +VGKSSLVL++V+G+F+ +ESTIG + SI
Sbjct: 2 PAFKENMKTYTFKVVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTIFTQEGSI 61
Query: 341 SFSM---PTKNRLNNNVPITF 358
F + + R N+ +P+ +
Sbjct: 62 KFEIWDTAGQERYNSLIPMYY 82
>gi|409083629|gb|EKM83986.1| hypothetical protein AGABI1DRAFT_110587 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 209
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 103/165 (62%), Gaps = 26/165 (15%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LDD T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +A++
Sbjct: 41 AAFLTQTVTLDDQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSSSLEKART 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++EL QR A PNIVI L GNK+DL +RR V E + Y
Sbjct: 101 WIREL---------------------QRQADPNIVITLCGNKSDLD-ARRQVTQEEAKKY 138
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP---KKEVNNGQGGR 236
AEE GL++ ETSAK+ V E+F IAKKLP +G G R
Sbjct: 139 AEEEGLMWAETSAKSGEGVTEVFTAIAKKLPLTASPSARSGAGSR 183
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 35/39 (89%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIG 40
>gi|358253771|dbj|GAA53757.1| Ras-related protein Rab-5B, partial [Clonorchis sinensis]
Length = 240
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 94/147 (63%), Gaps = 24/147 (16%)
Query: 77 AFITQTVCLDDV--TIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AF+TQTV D ++RFEIWDTAGQERYH+LAPMYYR AQAAIIVYDITN +F RAKS
Sbjct: 1 AFLTQTVICGDPPRSVRFEIWDTAGQERYHSLAPMYYRGAQAAIIVYDITNPSSFERAKS 60
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WV EL + + VK VIALAGNK DL +R V E +AY
Sbjct: 61 WVNELNERS-----------NAVK----------VIALAGNKLDLDF-KRAVSTEEAQAY 98
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIA 221
A +NGL+FMETSAK N+ E+F +
Sbjct: 99 ATQNGLIFMETSAKACTNITELFTAVG 125
>gi|194224580|ref|XP_001490105.2| PREDICTED: ras-related protein Rab-22A-like [Equus caballus]
Length = 194
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 108/178 (60%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VK EL + PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VK---------------------ELGQHGPPNIVVAIAGNKCDLVDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L P+ S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRQPSEPRRS-CC 194
>gi|395829258|ref|XP_003787777.1| PREDICTED: ras-related protein Rab-22A [Otolemur garnettii]
Length = 194
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 108/178 (60%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRQPAEPK-RGCC 194
>gi|440912506|gb|ELR62068.1| Ras-related protein Rab-22A, partial [Bos grunniens mutus]
Length = 182
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 28 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 87
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 88 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 125
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + + GG+ +L PK S CC
Sbjct: 126 DSIHAVFVETSAKNAININELFIEISRRIPSTDASPPSGGKGFKLRRQPSEPKRS-CC 182
>gi|167832330|dbj|BAG09235.1| plant-unique Rab5 homolog [Physcomitrella patens subsp. patens]
Length = 226
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 96/142 (67%), Gaps = 22/142 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F++QT+ L D TI+FEIWDTAGQERY +LAP+YYR A AA++VYDITN +TF +A+ W
Sbjct: 67 ASFLSQTINLQDSTIKFEIWDTAGQERYSSLAPLYYRGASAAVVVYDITNPETFLKAQFW 126
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KELQ+ P+IV+AL GNKADL S R V E AYA
Sbjct: 127 V---------------------KELQKHGNPDIVMALVGNKADL-ESEREVSREEALAYA 164
Query: 196 EENGLLFMETSAKTAMNVNEIF 217
E NG+ F+ETSAKTA NVN++F
Sbjct: 165 ESNGMFFIETSAKTADNVNQLF 186
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 269 MANSNNSNSNGRG-GRIQRPN--DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 325
M S++S + +G GR+Q + D +K + KLVLLG+S VGKS ++LRFVRGQF
Sbjct: 1 MGCSSSSPAAVKGSGRLQTTSQPDVLDSKNLRIKLVLLGDSGVGKSCILLRFVRGQFDPS 60
Query: 326 QESTIGG 332
+ T+G
Sbjct: 61 SKVTVGA 67
>gi|151337003|gb|ABS00941.1| GTP-binding protein RAB5 [Lentinula edodes]
Length = 207
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 102/151 (67%), Gaps = 23/151 (15%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV L+D T++FEIWDTAGQERY +LAPMYYRNA A++VYDIT + +A++
Sbjct: 41 AAFLTQTVTLEDQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKARN 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++E LQR A P+IVIAL GNK+DL ++RR V E + Y
Sbjct: 101 WIRE---------------------LQRQADPSIVIALCGNKSDL-SARRQVSEEEAKKY 138
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
AEE GL++ ETSAKT V+EIF IAKKLP
Sbjct: 139 AEEEGLMWAETSAKTGEGVSEIFTAIAKKLP 169
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|354468755|ref|XP_003496817.1| PREDICTED: ras-related protein Rab-22A-like [Cricetulus griseus]
Length = 191
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 37 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 96
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V +EL++ PP+IV+A+AGNK DL R +E + + YA
Sbjct: 97 V---------------------RELRQHGPPSIVVAIAGNKCDLTDVREVME-RDAKDYA 134
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 135 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRQPSEPKRS-CC 191
>gi|426241217|ref|XP_004014488.1| PREDICTED: ras-related protein Rab-22A [Ovis aries]
gi|296481198|tpg|DAA23313.1| TPA: RAS-related protein RAB-22A [Bos taurus]
Length = 194
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + + GG+ +L PK S CC
Sbjct: 138 DSIHAVFVETSAKNAININELFIEISRRIPSTDASPPSGGKGFKLRRQPSEPKRS-CC 194
>gi|149030014|gb|EDL85106.1| RAB22A, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|165971249|gb|AAI58651.1| Rab22a protein [Rattus norvegicus]
Length = 194
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V +EL++ PP+IV+A+AGNK DL R +E + + YA
Sbjct: 100 V---------------------RELRQHGPPSIVVAIAGNKCDLTDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI+++LP + + GG+ +L PK S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRLPSTDASPASGGKGFKLRRQPSEPKRS-CC 194
>gi|344237137|gb|EGV93240.1| Ras-related protein Rab-22A [Cricetulus griseus]
Length = 254
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 100 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 159
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V +EL++ PP+IV+A+AGNK DL R +E + + YA
Sbjct: 160 V---------------------RELRQHGPPSIVVAIAGNKCDLTDVREVME-RDAKDYA 197
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 198 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRQPSEPKRS-CC 254
>gi|340516399|gb|EGR46648.1| rab5-like GTPase [Trichoderma reesei QM6a]
Length = 229
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 99/174 (56%), Gaps = 36/174 (20%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT + +A+ W
Sbjct: 45 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPTSLVKARHW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLP-TSRRCVEYSEGE-- 192
V E LQR A P IVIAL GNK DL S+ E +EGE
Sbjct: 105 VAE---------------------LQRQASPGIVIALVGNKLDLAGESQGASEEAEGEDG 143
Query: 193 ------------AYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
+YAEE LLF ETSAKT NV E+F IA +P+ + + +G
Sbjct: 144 GDARKVSTEEAQSYAEEESLLFFETSAKTGHNVTEVFTAIANAIPETSLKSARG 197
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 44
>gi|453088930|gb|EMF16970.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 316
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 117/240 (48%), Gaps = 47/240 (19%)
Query: 22 RVLKLKTQIPKGNWFSMMSGKRQSDCMAQIWLKDRVDCMTQIVINVV---FYPY---LFS 75
R L+ N SM + S + + L + + +V+ V F P
Sbjct: 64 RSLRANRASSPSNTESMADAPKPSSSVKLVLLGEAAVGKSSLVLRFVNNDFQPNKEPTIG 123
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L + TI+FEIWDTAGQER+ +LAPMYYRNAQ+A++VYDIT + +A+ W
Sbjct: 124 AAFLTQKCQLPNRTIKFEIWDTAGQERFASLAPMYYRNAQSALVVYDITKPSSLVKARHW 183
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-----PTSR------- 183
V E LQR A P IVIAL GNK DL P
Sbjct: 184 VAE---------------------LQRQASPGIVIALVGNKLDLCEDDAPEGEQQESENA 222
Query: 184 --------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG 235
R V E +AYA+E LLF ETSAKT NV+E+F IA +P+ + + G
Sbjct: 223 EEEDTGAVRKVSSKEAKAYADEESLLFFETSAKTGHNVSEVFTAIANAIPETSLKGPRAG 282
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 26/34 (76%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F +E TIG
Sbjct: 91 KLVLLGEAAVGKSSLVLRFVNNDFQPNKEPTIGA 124
>gi|336271401|ref|XP_003350459.1| hypothetical protein SMAC_02172 [Sordaria macrospora k-hell]
gi|380090981|emb|CCC11514.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 236
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 97/179 (54%), Gaps = 41/179 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 47 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR------------ 183
V E LQR A P IVIAL GNK DL +
Sbjct: 107 VAE---------------------LQRQASPGIVIALVGNKLDLTSDSAGTAEVSGDGDD 145
Query: 184 --------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R + E + YAEE GLLF ETSAKT NV E+F IA +P+ + + +G
Sbjct: 146 NAEDSGDARKISTEEAKTYAEEEGLLFFETSAKTGHNVTEVFTAIANAIPETSLKSARG 204
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 46
>gi|254586679|ref|XP_002498907.1| ZYRO0G21384p [Zygosaccharomyces rouxii]
gi|238941801|emb|CAR29974.1| ZYRO0G21384p [Zygosaccharomyces rouxii]
Length = 218
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 111/207 (53%), Gaps = 44/207 (21%)
Query: 69 FYPYLFSAAFITQTVCLDD------VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYD 122
F AAF++QT+ ++D V I+FEIWDTAGQERY +LAPMYYRNA AA++VYD
Sbjct: 31 FRESTIGAAFLSQTIKIEDKGSQQEVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYD 90
Query: 123 ITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS 182
+T QD+ +A+ WV EL+ ++ ++VI L GNK DL T
Sbjct: 91 VTQQDSLAKAQGWVNELKT--------------------KVGEDDLVICLVGNKLDLCTE 130
Query: 183 R-------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL---PKKEVNN- 231
+ VE S+ E YA E GLLF E SAKT V ++F I +KL K E+ N
Sbjct: 131 EGESSSKPKAVESSDAEGYANEQGLLFHEVSAKTGEGVKQVFQSIGEKLYEFKKHELANS 190
Query: 232 ----GQGGRRLVETAEAPKTSN---CC 251
G GG + + P T++ CC
Sbjct: 191 KGRQGAGGDTVNVQLQRPSTNDATSCC 217
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 32/37 (86%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+ Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIG 37
>gi|353242503|emb|CCA74142.1| probable GTP-binding protein ypt5 [Piriformospora indica DSM 11827]
Length = 204
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 103/163 (63%), Gaps = 23/163 (14%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LDD TIRFEIWDTAGQERY +LAPMYYRNA A++VYDIT + +A+S
Sbjct: 41 AAFLTQTVQLDDQTTIRFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKARS 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++E LQR A P+I+IAL GNK DL +RR V E + Y
Sbjct: 101 WIRE---------------------LQRQADPSIIIALCGNKTDL-EARRQVTQEEAKKY 138
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRR 237
AEE GL++ E SAKT V +IF+ IAKKLP + +G R
Sbjct: 139 AEEEGLMWCEASAKTGEGVQDIFMAIAKKLPLSAPQSQKGQAR 181
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|367050914|ref|XP_003655836.1| hypothetical protein THITE_2171042 [Thielavia terrestris NRRL 8126]
gi|347003100|gb|AEO69500.1| hypothetical protein THITE_2171042 [Thielavia terrestris NRRL 8126]
Length = 233
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 96/177 (54%), Gaps = 39/177 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 47 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR------------ 183
V E LQR A P IVIAL GNK DL +
Sbjct: 107 VAE---------------------LQRQASPGIVIALVGNKLDLTNTGPGGGGDADGAGA 145
Query: 184 ------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R V E + YAEE GLLF ETSAKT NV E+F IA +P+ + +G
Sbjct: 146 EDSGDARKVTTEEAKTYAEEEGLLFYETSAKTGYNVTEVFTAIANAIPETSLKTARG 202
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 47
>gi|55962806|emb|CAI11700.1| RAB5A member RAS oncogene family [Danio rerio]
Length = 145
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 81/120 (67%), Gaps = 22/120 (18%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+ Q+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+V+DIT +T
Sbjct: 48 FQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPET 107
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F RAK+WVKEL QR A PNIVIALAGNKADL +R VEY
Sbjct: 108 FERAKAWVKEL---------------------QRQASPNIVIALAGNKADL-ADKRLVEY 145
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 292 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+TIG
Sbjct: 15 QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGA 55
>gi|449304761|gb|EMD00768.1| hypothetical protein BAUCODRAFT_182526 [Baudoinia compniacensis
UAMH 10762]
Length = 243
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 95/171 (55%), Gaps = 41/171 (23%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L + TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 50 AAFLTQKCQLPNRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKASSITKAKHW 109
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
V E LQR A P IVIA GNK DL
Sbjct: 110 VAE---------------------LQRQASPGIVIAFVGNKVDLCDDDAPEGEAAEGGEA 148
Query: 180 ----PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
+ R V + E +AYAEE LLF ETSAKT NV+E+F IA +P+
Sbjct: 149 EGEEDATVRKVSFKEAKAYAEEENLLFFETSAKTGHNVSEVFTAIANAIPE 199
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV +F +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNEFQPNKEPTIGA 50
>gi|355714872|gb|AES05145.1| RAB22A, member RAS oncoprotein family [Mustela putorius furo]
Length = 193
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 102/161 (63%), Gaps = 22/161 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR 236
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSADANPPSGGK 178
>gi|291414854|ref|XP_002723671.1| PREDICTED: RAS-related protein RAB-22A, partial [Oryctolagus
cuniculus]
Length = 182
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 28 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 87
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 88 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 125
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN--NGQGGRRLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + + +G G +L P+ S CC
Sbjct: 126 DSIHAIFVETSAKNAININELFIEISRRIPSGDTSQPSGSKGFKLRRQPSEPRRS-CC 182
>gi|432858229|ref|XP_004068856.1| PREDICTED: ras-related protein Rab-22A-like [Oryzias latipes]
Length = 194
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 108/179 (60%), Gaps = 27/179 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AA+IVYDIT +D+F K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAVIVYDITKEDSFQTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL +R E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLSDAREVSE-KDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLV---ETAEAPKTSNCC 251
E +F+ETSAK A+N+NE+F EI+K++P + G + + + +E+ KT CC
Sbjct: 138 ESIHAIFVETSAKNAININEVFTEISKRIPVVDAAGGSSAKSIKLGRQVSESRKT--CC 194
>gi|417396853|gb|JAA45460.1| Putative gtpase [Desmodus rotundus]
Length = 194
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + + GG+ +L PK S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDSSPPCGGKGFKLRRQPSEPKRS-CC 194
>gi|342321384|gb|EGU13318.1| GTP-binding protein ypt5 [Rhodotorula glutinis ATCC 204091]
Length = 1433
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 102/200 (51%), Gaps = 71/200 (35%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L+D I+FEIWDTAGQER+ +L+PMYYRNAQAA++VYD+T + +AK+W
Sbjct: 52 AAFLTQRCRLEDKVIKFEIWDTAGQERFRSLSPMYYRNAQAAVVVYDVTKSASLEQAKTW 111
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
VKEL QR A PNIVIALAGNK DL
Sbjct: 112 VKEL---------------------QRQANPNIVIALAGNKVDLVRPSSDGDDSASDAAV 150
Query: 180 ---------------------------------PT-SRRCVEYSEGEAYAEENGLLFMET 205
P+ SRR V E E YA+E GLLF ET
Sbjct: 151 NPEDSEEADDATATPEDEAGSAAGDDEGPDGGKPSESRRQVSREEAEEYAKECGLLFFET 210
Query: 206 SAKTAMNVNEIFVEIAKKLP 225
SAKT V E+F EIAKK+P
Sbjct: 211 SAKTGEGVVEVFTEIAKKIP 230
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 296 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
Q KLVLLGESAVGKSS+VLRF + F +E TIG
Sbjct: 16 VQVKLVLLGESAVGKSSVVLRFCQNDFQPNKEPTIG 51
>gi|367026926|ref|XP_003662747.1| hypothetical protein MYCTH_2303725 [Myceliophthora thermophila ATCC
42464]
gi|347010016|gb|AEO57502.1| hypothetical protein MYCTH_2303725 [Myceliophthora thermophila ATCC
42464]
Length = 233
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 96/177 (54%), Gaps = 39/177 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 47 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT-------------- 181
V E LQR A P IVIAL GNK DL
Sbjct: 107 VAE---------------------LQRQASPGIVIALVGNKLDLADDGAGSGGDAEDAGG 145
Query: 182 ----SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
+ R + E + YAEE GLLF ETSAKT NV E+F IA +P+ + +G
Sbjct: 146 EESGNARKISTEEAKTYAEEEGLLFFETSAKTGYNVTEVFTAIANAIPETSLKTARG 202
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 46
>gi|402077303|gb|EJT72652.1| vacuolar protein sorting-associated protein 21 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 232
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 97/178 (54%), Gaps = 40/178 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 46 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPASLVKAKHW 105
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT-------------- 181
V E LQR A P IVIAL GNK DL +
Sbjct: 106 VAE---------------------LQRQASPGIVIALVGNKLDLTSDGGDAVADADDGAD 144
Query: 182 -----SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R + E + YAEE LLF ETSAKT +NV E+F IA +P+ + + +G
Sbjct: 145 DAAGGDARKISTEEAKGYAEEESLLFFETSAKTGVNVTEVFTAIANAIPETSLKSARG 202
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 46
>gi|169770627|ref|XP_001819783.1| vacuolar protein sorting-associated protein 21 [Aspergillus oryzae
RIB40]
gi|238486934|ref|XP_002374705.1| RAB GTPase Vps21/Ypt51, putative [Aspergillus flavus NRRL3357]
gi|83767642|dbj|BAE57781.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220699584|gb|EED55923.1| RAB GTPase Vps21/Ypt51, putative [Aspergillus flavus NRRL3357]
gi|391867399|gb|EIT76645.1| GTPase Rab5/YPT51 [Aspergillus oryzae 3.042]
Length = 264
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 99/200 (49%), Gaps = 61/200 (30%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 50 AAFLTQKCSLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPSSLTKAKHW 109
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
V E LQR A P IVIAL GNK DL
Sbjct: 110 VAE---------------------LQRQASPGIVIALVGNKLDLTNDGNEASGEPQADGE 148
Query: 180 ------------------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNE 215
P R V E +YA+E GLLF ETSAKT +NV E
Sbjct: 149 QQPPAATADGDDAAGEPQEEQDATPGDARKVSTREASSYADEEGLLFFETSAKTGVNVVE 208
Query: 216 IFVEIAKKLPKKEVNNGQGG 235
+F IA +P+ + +G+G
Sbjct: 209 VFTAIANAIPESSLKSGRGA 228
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|385303401|gb|EIF47476.1| putative rab family gtp-binding protein [Dekkera bruxellensis
AWRI1499]
Length = 217
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 105/190 (55%), Gaps = 33/190 (17%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + D I+FEIWDTAGQER+ L P+YYRNAQAA++VYD+T +F
Sbjct: 45 AAFLTQRCIIGDKNIKFEIWDTAGQERFANLTPLYYRNAQAALVVYDVTKPSSF------ 98
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTS------RRCV 186
+ WVKEL A NIVIAL GNK DL P S R V
Sbjct: 99 --------------LSXQRHWVKELHEQASKNIVIALVGNKFDLILDPESGEEIEGARKV 144
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP---KKEVNNGQGGRRLVETAE 243
EG+ AEE LLF ETSAKT +NVN++F I +K+P K+ N +G ++ +
Sbjct: 145 SIDEGKXLAEEENLLFFETSAKTGLNVNKVFTTIGEKIPDTXKQXXNXDEGNSNRIDLS- 203
Query: 244 APKTSNCCNT 253
AP ++ N+
Sbjct: 204 APAQNDIHNS 213
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVSNDFEENKEPTIGA 45
>gi|348537324|ref|XP_003456145.1| PREDICTED: ras-related protein Rab-22A-like [Oreochromis niloticus]
Length = 194
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 105/176 (59%), Gaps = 22/176 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT +D+F K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEDSFQTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL +R E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLSDAREVPE-KDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+FVEI+K++P + G R +A ++ C
Sbjct: 138 DSIHAIFVETSAKNAININEVFVEISKRIPVVDEAGGSSARGFKLGRQASESRRTC 193
>gi|224054094|ref|XP_002191412.1| PREDICTED: ras-related protein Rab-17 [Taeniopygia guttata]
Length = 213
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 106/181 (58%), Gaps = 25/181 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
+F TQ + L++ T++FEIWDTAGQE+Y ++ +YYR+A AA++VYDI N+ TF RAK W+
Sbjct: 54 SFFTQILNLEEATVKFEIWDTAGQEKYQSVCHLYYRDAHAALLVYDIANKQTFSRAKLWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
+EL++ + P IVIAL GNK DL R V EGE +A
Sbjct: 114 EELEK--------------------KFLPDEIVIALVGNKTDLAAERE-VTTEEGEDFAR 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG----GRRLVETAEAPKTSNCCN 252
GLLFMETSAK+ VN++F+ I ++L ++E G+ V+ + ++ CC
Sbjct: 153 TKGLLFMETSAKSNHQVNDLFMAIVQELLRREKEKASKPSPHGKVTVDLRASSTSTGCCR 212
Query: 253 T 253
+
Sbjct: 213 S 213
>gi|291237548|ref|XP_002738700.1| PREDICTED: RAB5B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 217
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 97/152 (63%), Gaps = 22/152 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF ++T+ +++ I +IWDTAG E+YH+LA MYYR A AAI+VYDIT Q TF R SW
Sbjct: 53 AAFTSKTLHVENALIELQIWDTAGTEKYHSLASMYYRGAHAAIVVYDITQQTTFLRVNSW 112
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+EL R A PNI I LAGNKADL +R+ V + +AYA
Sbjct: 113 VREL---------------------HRQATPNIAIILAGNKADLEDTRK-VSCEDAQAYA 150
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+N + F+ETSAKTA+NV+++F +A KL ++
Sbjct: 151 NDNSITFIETSAKTALNVDDLFSTLAIKLHEE 182
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 280 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
R G QR + + Q QYKLVL+GE+ VGKSSL +++VRG+F + ++TIG
Sbjct: 3 RNGSTQRYDKRPQR--FQYKLVLVGEAGVGKSSLAMQYVRGEFDKDMQTTIGA 53
>gi|224078511|ref|XP_002199135.1| PREDICTED: ras-related protein Rab-22A [Taeniopygia guttata]
Length = 194
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 107/178 (60%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLNDVREVME-KDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N G+ +L K S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDTNPASSGKGFKLRRQPSVTKRS-CC 194
>gi|402470455|gb|EJW04677.1| small GTP-binding protein domain protein [Edhazardia aedis USNM
41457]
Length = 194
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 96/151 (63%), Gaps = 22/151 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF +TV L D +++EIWDTAGQERY++L PMYYR AQ A+IVYDITN +F AK W
Sbjct: 45 AAFCAKTVQLKDCNVKYEIWDTAGQERYNSLIPMYYRGAQVALIVYDITNPQSFTCAKKW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V EL+ P K ++K L GNK+DL SR+ + + +G YA
Sbjct: 105 VDELKEEKP---------KDFLK------------VLVGNKSDLDASRK-IHFEDGLNYA 142
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
E+NGLLF ETSAKT NV++IF ++A LP+
Sbjct: 143 EQNGLLFYETSAKTGYNVDKIFEDVASILPR 173
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG----------ECQSSHSI 340
T + YKLV+LG +VGKSSLV+++V+ +F+ +ESTIG +C + I
Sbjct: 4 TSDMVYNYKLVVLGYYSVGKSSLVMKYVKREFNPNEESTIGAAFCAKTVQLKDCNVKYEI 63
Query: 341 SFSMPTKNRLNNNVPITF 358
+ + R N+ +P+ +
Sbjct: 64 -WDTAGQERYNSLIPMYY 80
>gi|310789342|gb|EFQ24875.1| Ras family protein [Glomerella graminicola M1.001]
Length = 237
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 96/178 (53%), Gaps = 40/178 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 48 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT-------------- 181
V E LQR A P IVIAL GNK DL +
Sbjct: 108 VAE---------------------LQRQASPGIVIALVGNKLDLTSETDSGSAGDSEGAD 146
Query: 182 -----SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R V E + YAEE LLF ETSAKT NV E+F IA +P+ + + +G
Sbjct: 147 ADDSGDARKVSTEEAKTYAEEESLLFFETSAKTGHNVTEVFTAIANAIPETSLKSARG 204
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 47
>gi|443701022|gb|ELT99690.1| hypothetical protein CAPTEDRAFT_6450 [Capitella teleta]
Length = 169
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 96/147 (65%), Gaps = 22/147 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+T+TV +D T +++IWDTAGQE+Y LAPMYYR A AAIIVYDIT + +F KSW
Sbjct: 40 AAFLTKTVIVDGTTYKYQIWDTAGQEKYRALAPMYYRGAAAAIIVYDITQESSFRATKSW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
+ EL Q+ A PNIV+A+AGNK DL R V+YS +YA
Sbjct: 100 ITEL---------------------QKHASPNIVLAIAGNKLDLD-DLRDVQYSTALSYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAK 222
++ G +F+ETSAK+A N+ +F+EI++
Sbjct: 138 DKQGTVFVETSAKSAANIPALFMEISE 164
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ + KL LLG+S VGKSS+V RFV F STIG
Sbjct: 3 VHEVKLCLLGDSGVGKSSIVHRFVYDSFRPAMTSTIGA 40
>gi|50418070|gb|AAH77537.1| LOC445870 protein, partial [Xenopus laevis]
Length = 215
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 109/178 (61%), Gaps = 26/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 62 ASFMTKTVPHQNELHKFLIWDTAGQERFRALAPMYYRGSTAAIIVYDITKEETFSTLKNW 121
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E E + YA
Sbjct: 122 VKE---------------------LRQHGPPNIVVAIAGNKCDLNDVREVLE-KEAKDYA 159
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGRRLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI+K++P +G+G + +++E + CC
Sbjct: 160 DSINAVFVETSAKNAININELFIEISKRIPSANAGATSGKGFKLKRQSSEVER--RCC 215
>gi|1710019|sp|P51154.1|RB22A_CANFA RecName: Full=Ras-related protein Rab-22A; Short=Rab-22
Length = 194
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQE + LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQEAFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L P+ S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSADANPPSGGKGFKLRRQPSEPQRS-CC 194
>gi|344303655|gb|EGW33904.1| hypothetical protein SPAPADRAFT_59281 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 105/194 (54%), Gaps = 38/194 (19%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + + TI++EIWDTAGQER+ +LAPMYYRNAQAAI+VYDIT +F +A+ W
Sbjct: 44 AAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMYYRNAQAAIVVYDITKPASFIKARHW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR----------RC 185
VKEL A +I IAL GNK DL R
Sbjct: 104 ---------------------VKELHEQAAKDITIALVGNKYDLVQDDDEGQGEREGVRK 142
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK-------EVNNGQGGRRL 238
V EG+ A E GLLF ETSAKT+ NVN++F+ I K+P+ E NN +G L
Sbjct: 143 VSVEEGQNLAAEEGLLFYETSAKTSYNVNDVFIGIGNKIPEAASLASSPEQNNNEGRIDL 202
Query: 239 VETAEAPKTSNCCN 252
A + N C+
Sbjct: 203 STNASSNGNRNLCS 216
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGA 44
>gi|347827173|emb|CCD42870.1| similar to vacuolar sorting-associated protein [Botryotinia
fuckeliana]
Length = 238
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 96/181 (53%), Gaps = 43/181 (23%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQ+A++VYD+T + +AK W
Sbjct: 46 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQSALVVYDLTKPTSLAKAKHW 105
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR------------ 183
V E LQR A P IVIAL GNK DL
Sbjct: 106 VAE---------------------LQRQASPGIVIALVGNKLDLTNESDDSSNNLGDEES 144
Query: 184 ----------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ 233
R V +E ++YAEE GLLF ETSAK NV E+F IA +P+ + +
Sbjct: 145 AEGEDSGGDARKVSTAEAKSYAEEEGLLFFETSAKLGTNVTEVFTAIANAIPETSLKGAR 204
Query: 234 G 234
G
Sbjct: 205 G 205
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%), Gaps = 3/33 (9%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+A SSLVLRFV F E +E TIG
Sbjct: 16 KLVLLGEAA---SSLVLRFVNNDFQENKEPTIG 45
>gi|47220716|emb|CAG11785.1| unnamed protein product [Tetraodon nigroviridis]
Length = 194
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 105/176 (59%), Gaps = 22/176 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT +D+F K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEDSFQTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL +R E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLLDAREVSE-KDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI+K++P + GR +A ++ C
Sbjct: 138 DSIHAIFVETSAKNAININEVFIEISKRIPAADAVAATTGRGFKLGRQASESQRTC 193
>gi|149642869|ref|NP_001092635.1| ras-related protein Rab-22A [Bos taurus]
gi|148744911|gb|AAI42191.1| RAB22A protein [Bos taurus]
Length = 194
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+ +EI++++P + + GG+ +L PK S CC
Sbjct: 138 DSIHAVFVETSAKNAININELLIEISRRIPSTDASPPSGGKGFKLRRQPSEPKRS-CC 194
>gi|326922383|ref|XP_003207428.1| PREDICTED: ras-related protein Rab-17-like, partial [Meleagris
gallopavo]
Length = 212
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 95/152 (62%), Gaps = 21/152 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
+F TQT+ L+ TI+ EIWDTAGQE+YH++ +YYR A AA++VYD+TN++TF RAK W+
Sbjct: 82 SFFTQTIQLETATIKLEIWDTAGQEKYHSVCHLYYRGAHAALLVYDLTNKETFNRAKQWL 141
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
EL++ P IVIAL GNK DL R V +GE +A
Sbjct: 142 MELEK--------------------EFLPDEIVIALVGNKTDLADERE-VAAEDGEEFAR 180
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
LLFMETSAK+ VN+IF+ +A++L ++E
Sbjct: 181 SRSLLFMETSAKSNHQVNDIFMAVARELLRRE 212
>gi|410953504|ref|XP_003983410.1| PREDICTED: ras-related protein Rab-22A [Felis catus]
Length = 226
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 109/178 (61%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 72 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 131
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+E L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 132 VRE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 169
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + + GG+ +L P+ S CC
Sbjct: 170 DSIHAIFVETSAKNAININELFIEISRRIPSADASPPSGGKGFKLRRQPSEPQRS-CC 226
>gi|366990901|ref|XP_003675218.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS 4309]
gi|342301082|emb|CCC68847.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS 4309]
Length = 216
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 115/199 (57%), Gaps = 42/199 (21%)
Query: 76 AAFITQTVCL------DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
AAF++QT+ + +DV I+FEIWDTAGQERY +LAPMYYRNA AA++VYD+T +D+
Sbjct: 38 AAFLSQTIKIKAEEQEEDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDLTQKDSL 97
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCV 186
+A+SWV+EL+ ++ ++VI L GNK DL R V
Sbjct: 98 VKARSWVEELK--------------------NKVGDEDLVIFLVGNKLDLCEGEEDLRAV 137
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL---PKKEV---NNGQGGRRLVE 240
+ SE +AYAEE LLF E SAKT V E+F I +KL K E+ N + G R+
Sbjct: 138 DTSEAKAYAEEQNLLFTEVSAKTGQGVKEVFRSIGEKLYASKKDEILAKKNRELGNRVNN 197
Query: 241 T----AEAPKTSN---CCN 252
+ A+ P T++ CC+
Sbjct: 198 SVDINAQRPSTNDTTTCCS 216
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDELRESTIGA 38
>gi|328874267|gb|EGG22633.1| hypothetical protein DFA_04763 [Dictyostelium fasciculatum]
Length = 661
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 104/177 (58%), Gaps = 27/177 (15%)
Query: 59 CMTQIVINVVFYPY--LFSAAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQ 115
C+ ++ F P AAF+ + + LD+ T++ EIWDTAGQERY +L PMYYR A
Sbjct: 54 CIASRLVRNEFVPTDSTIGAAFLVKNMTLDNGNTVKLEIWDTAGQERYRSLTPMYYRGAS 113
Query: 116 AAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGN 175
AA+IVYDIT ++TF K WV E LQ+ A PN+++ALAGN
Sbjct: 114 AAVIVYDITKKNTFETLKRWVSE---------------------LQKQASPNLILALAGN 152
Query: 176 KADLPTSRRCVEYSEGEAYAEENG-LLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN 231
KADLP R V+ E Y E G ++F ETSA+T NVNE+F EI KK+ K VN+
Sbjct: 153 KADLP--HREVQVDEVSKYISELGDVIFFETSAQTGFNVNELFTEICKKITSKVVNS 207
>gi|452847434|gb|EME49366.1| hypothetical protein DOTSEDRAFT_19823 [Dothistroma septosporum
NZE10]
Length = 242
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 95/171 (55%), Gaps = 41/171 (23%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQ+A++VYDIT + +AK W
Sbjct: 50 AAFLTQKCQLPSRTIKFEIWDTAGQERFASLAPMYYRNAQSALVVYDITKASSLVKAKHW 109
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
V E LQR A P IVIAL GNK DL
Sbjct: 110 VAE---------------------LQRQASPGIVIALVGNKLDLCEDDNADGEQAEGESE 148
Query: 180 ----PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
++ R V E +AYA+E LLF ETSAKT NV+E+F IA +P+
Sbjct: 149 AEEDASTTRKVSIKEAKAYADEENLLFFETSAKTGHNVSEVFTAIANAIPE 199
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG-----ECQ-SSHSISFSM 344
KLVLLGE+AVGKSSLVLRFV F +E TIG +CQ S +I F +
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQPNKEPTIGAAFLTQKCQLPSRTIKFEI 68
>gi|340383023|ref|XP_003390017.1| PREDICTED: ras-related protein Rab-22A-like [Amphimedon
queenslandica]
Length = 180
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 103/170 (60%), Gaps = 22/170 (12%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
+F+++++ +D+ TI+F+IWDTAGQERY +L PMYYRNA AAI+VYDITN+ +F + W+
Sbjct: 7 SFMSKSLTVDNSTIKFQIWDTAGQERYRSLLPMYYRNAAAAIVVYDITNEGSFTVLQDWI 66
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
EL R + PPNIV+A+AGNK DL R + +G+ YA
Sbjct: 67 AELHR---------------------LGPPNIVLAIAGNKCDLEDIRE-IPAEQGQTYAS 104
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPK 246
E +F ETSA TA NV ++F+EI +KLP + + L+ + P+
Sbjct: 105 EVNAIFGETSALTARNVEKMFIEITRKLPPDCLTSLPAFASLLRQTDTPR 154
>gi|154309716|ref|XP_001554191.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 221
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 97/182 (53%), Gaps = 43/182 (23%)
Query: 75 SAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
++AF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQ+A++VYD+T + +AK
Sbjct: 28 ASAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQSALVVYDLTKPTSLAKAKH 87
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR----------- 183
WV E LQR A P IVIAL GNK DL
Sbjct: 88 WVAE---------------------LQRQASPGIVIALVGNKLDLTNESDDSSNNLGDEE 126
Query: 184 -----------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG 232
R V +E ++YAEE GLLF ETSAK NV E+F IA +P+ +
Sbjct: 127 SAEGEDSGGDARKVSTAEAKSYAEEEGLLFFETSAKLGTNVTEVFTAIANAIPETSLKGA 186
Query: 233 QG 234
+G
Sbjct: 187 RG 188
>gi|378728260|gb|EHY54719.1| rab family, other [Exophiala dermatitidis NIH/UT8656]
Length = 252
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 99/189 (52%), Gaps = 51/189 (26%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + L + I+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 48 AAFLTQKISLPNRIIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLVKAKHW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
V E LQR A P IVIAL GNK DL
Sbjct: 108 VAE---------------------LQRQASPGIVIALVGNKLDLCSETSGDSDATAESAE 146
Query: 180 -----------PTSR---RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
PT R + E +AYAEE GLLF ETSAKT NV ++F IA +P
Sbjct: 147 NEEGGDSAEAEPTDSGDARKISTREAKAYAEEEGLLFFETSAKTGTNVADVFSAIANAIP 206
Query: 226 KKEVNNGQG 234
+ + +G
Sbjct: 207 ETSLKGARG 215
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 47
>gi|410335381|gb|JAA36637.1| RAB22A, member RAS oncogene family [Pan troglodytes]
Length = 196
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 109/180 (60%), Gaps = 27/180 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIA--KKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI+ +++P + N GG+ +L PK S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISLGRRIPSTDANPPSGGKGFKLRRQPSEPKRS-CC 196
>gi|71894915|ref|NP_001026038.1| ras-related protein Rab-22A [Gallus gallus]
gi|53130292|emb|CAG31475.1| hypothetical protein RCJMB04_6n2 [Gallus gallus]
Length = 194
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 101/161 (62%), Gaps = 22/161 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLNDVREVME-KDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR 236
+ +F+ETSAK A+N+NE+F+EI++++P + N G+
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDTNPPSSGK 178
>gi|449274250|gb|EMC83533.1| Ras-related protein Rab-22A [Columba livia]
Length = 194
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 101/161 (62%), Gaps = 22/161 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLNDVREVME-KDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR 236
+ +F+ETSAK A+N+NE+F+EI++++P + N G+
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSSGK 178
>gi|326932152|ref|XP_003212184.1| PREDICTED: ras-related protein Rab-22A-like [Meleagris gallopavo]
Length = 191
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 107/178 (60%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 37 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 96
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 97 VKE---------------------LRQHGPPNIVVAIAGNKCDLNDVREVME-KDAKDYA 134
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N G+ +L K S CC
Sbjct: 135 DSIHAIFVETSAKNAININELFIEISRRIPSTDTNPPSSGKGFKLRRQPSVTKRS-CC 191
>gi|147902647|ref|NP_001090471.1| RAB31, member RAS oncogene family [Xenopus laevis]
gi|71682203|gb|AAI00187.1| Rab31 protein [Xenopus laevis]
Length = 193
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 109/178 (61%), Gaps = 26/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVPHQNELHKFLIWDTAGQERFRALAPMYYRGSTAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E E + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLNDVREVLE-KEAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGRRLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI+K++P +G+G + +++E + CC
Sbjct: 138 DSINAVFVETSAKNAININELFIEISKRIPSANAGATSGKGFKLRRQSSEVER--RCC 193
>gi|344230490|gb|EGV62375.1| GTP-binding protein of the rab/ypt family [Candida tenuis ATCC
10573]
Length = 218
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 109/201 (54%), Gaps = 40/201 (19%)
Query: 69 FYPYLFSAAFITQTVCLDD--VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
F AAF+TQT+ L + TI+FEIWDTAGQERY +LAPMYYRNA AA+ VYDITN
Sbjct: 40 FRESTIGAAFLTQTITLPESKTTIKFEIWDTAGQERYKSLAPMYYRNAHAALCVYDITNP 99
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRR-- 184
+F +A+ W+ KEL++ AP IVI L GNK DL R+
Sbjct: 100 SSFTKAQDWI---------------------KELKKQAPEGIVICLVGNKLDLSEERQVD 138
Query: 185 ---CVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR----- 236
++Y + E +EN +L+ E SAK+ V +IF +I + LP +EV NG R
Sbjct: 139 EQEVLQYVQ-ELNHQENNVLWAECSAKSGEGVLDIFNKIGRALPVEEVINGASSRARQVG 197
Query: 237 ------RLVETAEAPKTSNCC 251
L A +P+ S CC
Sbjct: 198 SRKPGVDLARQAHSPQNSGCC 218
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+V RFV+ F ++ESTIG
Sbjct: 9 RFAQFKLVLLGESAVGKSSIVHRFVKNTFDNFRESTIGA 47
>gi|302903042|ref|XP_003048772.1| hypothetical protein NECHADRAFT_62851 [Nectria haematococca mpVI
77-13-4]
gi|256729706|gb|EEU43059.1| hypothetical protein NECHADRAFT_62851 [Nectria haematococca mpVI
77-13-4]
Length = 236
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 96/177 (54%), Gaps = 39/177 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 48 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
V E LQR A P IVIAL GNK DL
Sbjct: 108 VAE---------------------LQRQASPGIVIALVGNKLDLTGDSGAAADSQNGDDG 146
Query: 180 --PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R V E ++YAEE LLF ETSAK+ NV E+F IA +P+ + + +G
Sbjct: 147 EESGDARKVSTEEAQSYAEEESLLFFETSAKSGHNVTEVFTAIANAIPETSLKSARG 203
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 47
>gi|344302341|gb|EGW32646.1| hypothetical protein SPAPADRAFT_61705 [Spathaspora passalidarum
NRRL Y-27907]
Length = 223
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 102/174 (58%), Gaps = 33/174 (18%)
Query: 74 FSAAFITQTVCL--DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGR 131
AAF+TQT+ + D TI+FEIWDTAGQERY +LAPMYYRNA AA+ VYDIT++ +F R
Sbjct: 44 IGAAFLTQTITIPETDTTIKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRVSFNR 103
Query: 132 AKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEG 191
A+ W+K EL++ AP IVIAL GNK+DL +R VE SE
Sbjct: 104 AQDWIK---------------------ELRKQAPEGIVIALVGNKSDLSDNRE-VELSEV 141
Query: 192 EAYAEE---------NGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR 236
E Y E+ + ++ E SAKT V E+F I + LP +E N GGR
Sbjct: 142 EEYVEQYNSEATGGGSTIIIAECSAKTGDGVLEVFNRIGRALPVEEAINAAGGR 195
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 32/39 (82%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++ Q+KLVLLGESAVGKSS+V RFV+ F E +ESTIG
Sbjct: 7 SRFAQFKLVLLGESAVGKSSIVHRFVKNTFDELRESTIG 45
>gi|327278061|ref|XP_003223781.1| PREDICTED: ras-related protein Rab-22A-like [Anolis carolinensis]
Length = 194
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 101/161 (62%), Gaps = 22/161 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLNDVREVME-KDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR 236
+ +F+ETSAK A+N+NE+F+EI++++P + N G+
Sbjct: 138 DSIHAVFVETSAKNAININELFIEISRRIPSTDTNPPSSGK 178
>gi|115612989|ref|XP_790094.2| PREDICTED: ras-related protein Rab-31-like [Strongylocentrotus
purpuratus]
Length = 195
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 105/183 (57%), Gaps = 24/183 (13%)
Query: 71 PYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFG 130
P A+F+++T+ +D+ +F+IWDTAGQE+Y LAPMYYR A AAI+VYDIT+Q +F
Sbjct: 35 PPTIGASFMSKTLAVDEKMYKFQIWDTAGQEKYRGLAPMYYRGAAAAIVVYDITSQASFS 94
Query: 131 RAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSE 190
+ + W ++EL++ P NIVI++AGNK DL R +
Sbjct: 95 KVRDW---------------------IRELRQHGPENIVISIAGNKCDLEDLRE-IPVKI 132
Query: 191 GEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV--NNGQGGRRLVETAEAPKTS 248
YAEE G +F ETSAKTA N+ E+F+ I+KKLP + + + G L E K
Sbjct: 133 AAEYAEEVGAVFTETSAKTAANIKELFIAISKKLPPEVLVPSYGTDTVNLRNQKEKKKRG 192
Query: 249 NCC 251
CC
Sbjct: 193 RCC 195
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS 336
+ KL LLG+S VGKSS+V RFV ++E TIG S
Sbjct: 5 EIKLCLLGDSGVGKSSIVQRFVSDTYYESIPPTIGASFMS 44
>gi|410919323|ref|XP_003973134.1| PREDICTED: ras-related protein Rab-22A-like [Takifugu rubripes]
Length = 194
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 105/176 (59%), Gaps = 22/176 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT +++F K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL +R E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLSDAREVSE-KDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI+K++P +V R +A ++ C
Sbjct: 138 DSIHAIFVETSAKNAININEVFIEISKRIPAVDVVGATAARGFKLGRQASESHRTC 193
>gi|340382253|ref|XP_003389635.1| PREDICTED: ras-related protein Rab-22A-like [Amphimedon
queenslandica]
Length = 131
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 97/149 (65%), Gaps = 22/149 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
F A+F+++++ +D+ TI+F+IWDTAGQERY +L PMYYRNA AAI+VYDITN+ +F +
Sbjct: 5 FRASFMSKSLTVDNSTIKFQIWDTAGQERYRSLLPMYYRNAAAAIVVYDITNEGSFTVLQ 64
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
W+ EL R + PPNIV+A+AGNK DL +R + +G+
Sbjct: 65 DWIAELHR---------------------LDPPNIVLAIAGNKCDLE-DKREIPAEQGQT 102
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAK 222
YA E +F ETSA TA NV E+F+EI++
Sbjct: 103 YASEVNAIFAETSALTARNVEEMFIEISE 131
>gi|380488839|emb|CCF37107.1| Ras family protein [Colletotrichum higginsianum]
Length = 236
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 95/178 (53%), Gaps = 40/178 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 48 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT-------------- 181
V E LQR A P IVIAL GNK DL
Sbjct: 108 VAE---------------------LQRQASPGIVIALVGNKLDLTNDAESGSAGDNEEAD 146
Query: 182 -----SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R + E + YAEE LLF ETSAKT NV E+F IA +P+ + + +G
Sbjct: 147 GEDSGDARKISTEEAKTYAEEESLLFFETSAKTGHNVTEVFTAIANAIPETSLKSARG 204
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 47
>gi|116191911|ref|XP_001221768.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181586|gb|EAQ89054.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 204
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 94/176 (53%), Gaps = 38/176 (21%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 47 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT-------------- 181
V E LQR A P IVIAL GNK DL
Sbjct: 107 VAE---------------------LQRQASPGIVIALVGNKLDLTNDGAGNGGDVDAGGE 145
Query: 182 ---SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R + E + YAEE LLF ETSAKT NV E+F IA +P+ + +G
Sbjct: 146 DSGDARKITTEEAKTYAEEESLLFFETSAKTGYNVTEVFTAIANAIPETSLKTARG 201
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 46
>gi|145232756|ref|XP_001399777.1| vacuolar protein sorting-associated protein 21 [Aspergillus niger
CBS 513.88]
gi|134056697|emb|CAL00639.1| unnamed protein product [Aspergillus niger]
gi|350634623|gb|EHA22985.1| hypothetical protein ASPNIDRAFT_197381 [Aspergillus niger ATCC
1015]
Length = 262
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 97/198 (48%), Gaps = 59/198 (29%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 50 AAFLTQKCSLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPSSLTKAKHW 109
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS------------- 182
V E LQR A P IVIAL GNK DL
Sbjct: 110 VAE---------------------LQRQASPGIVIALVGNKLDLTNDGNEATGESPADAE 148
Query: 183 -------------------------RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIF 217
R V E AYAEE GLLF ETSAKT NV ++F
Sbjct: 149 GESSTADADETAEEPQEAQDVTSGDARKVPTREASAYAEEEGLLFFETSAKTGTNVVDVF 208
Query: 218 VEIAKKLPKKEVNNGQGG 235
IA +P+ + +G+ G
Sbjct: 209 TAIANAIPESSLKSGRAG 226
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 49
>gi|345570560|gb|EGX53381.1| hypothetical protein AOL_s00006g247 [Arthrobotrys oligospora ATCC
24927]
Length = 247
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 99/193 (51%), Gaps = 52/193 (26%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQ+A++VYD+T + +AK W
Sbjct: 46 AAFLTQKCNLPSRTIKFEIWDTAGQERFASLAPMYYRNAQSALVVYDLTKASSLAKAKHW 105
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS------ 189
V E LQR A P IVIAL GNK DL + +E S
Sbjct: 106 VAE---------------------LQRQASPGIVIALVGNKLDLTSQSTGLENSMGGLSL 144
Query: 190 -----------------------EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
E ++YA+E GLLF ETSAKT NV E+F IA +P+
Sbjct: 145 SAAAGDGDEEEEEEGDARQITTAEAKSYADEEGLLFFETSAKTGHNVQEVFTAIANAIPE 204
Query: 227 K--EVNNGQGGRR 237
+ G G R
Sbjct: 205 STLKTRGGPGSNR 217
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVNDDFQENREPTIG 45
>gi|344296537|ref|XP_003419963.1| PREDICTED: ras-related protein Rab-22A-like [Loxodonta africana]
Length = 194
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VK EL++ PP+IV+A+AGNK DL R +E + + YA
Sbjct: 100 VK---------------------ELRQHGPPDIVVAIAGNKCDLIDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN--NGQGGRRLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N +G G +L K S CC
Sbjct: 138 DSIHAVFVETSAKNAININELFIEISRRIPSTDANPPSGSKGFKLRRQPSEAKRS-CC 194
>gi|293332195|ref|NP_001169100.1| uncharacterized protein LOC100382944 [Zea mays]
gi|223974943|gb|ACN31659.1| unknown [Zea mays]
gi|358365497|dbj|GAA82119.1| RAB GTPase Vps21/Ypt51 [Aspergillus kawachii IFO 4308]
Length = 262
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 97/198 (48%), Gaps = 59/198 (29%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 50 AAFLTQKCSLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPSSLTKAKHW 109
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS------------- 182
V E LQR A P IVIAL GNK DL
Sbjct: 110 VAE---------------------LQRQASPGIVIALVGNKLDLTNDGNEAAGESPADAE 148
Query: 183 -------------------------RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIF 217
R V E AYAEE GLLF ETSAKT NV ++F
Sbjct: 149 GESSTADADETAEEPQEAQDVTSGDARKVPTREASAYAEEEGLLFFETSAKTGTNVVDVF 208
Query: 218 VEIAKKLPKKEVNNGQGG 235
IA +P+ + +G+ G
Sbjct: 209 TAIANAIPESSLKSGRAG 226
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 49
>gi|167539982|ref|XP_001741487.1| rab5 [Entamoeba dispar SAW760]
gi|165893902|gb|EDR22017.1| rab5, putative [Entamoeba dispar SAW760]
Length = 195
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 100/183 (54%), Gaps = 23/183 (12%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+T+T+ +D TI+FEIWDTAGQERYH+L PMYYR + AA++VYDIT+ +
Sbjct: 36 FQENTIGAAFLTKTLIVDGDTIKFEIWDTAGQERYHSLTPMYYRGSNAALVVYDITSDSS 95
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F +AK W+ EL R + +I L GNK DL S R +
Sbjct: 96 FTQAKKWIDEL----------------------RGSGNEAIIFLVGNKCDLADS-RVITK 132
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTS 248
E E YA + ++ETSAK +NVNE+F +IA+KLP+ E L+ +
Sbjct: 133 EEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRNEKGLIDPDEVLISNNKTDNKK 192
Query: 249 NCC 251
CC
Sbjct: 193 GCC 195
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 31/36 (86%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+K+VLLG+S+VGKSS+VLR + ++ E+QE+TIG
Sbjct: 8 QFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGA 43
>gi|156051994|ref|XP_001591958.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154705182|gb|EDO04921.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 241
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 96/181 (53%), Gaps = 43/181 (23%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQ+A++VYD+T + +AK W
Sbjct: 49 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQSALVVYDLTKPTSLIKAKHW 108
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR------------ 183
V E LQR A P IVIAL GNK DL
Sbjct: 109 VAE---------------------LQRQASPGIVIALVGNKLDLTNESDDSNNNLGDEES 147
Query: 184 ----------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ 233
R V +E ++YAEE GLLF ETSAK NV E+F IA +P+ + +
Sbjct: 148 AEGEDSGGDARKVSTAEAKSYAEEEGLLFFETSAKLGTNVTEVFTAIANAIPETSLKGAR 207
Query: 234 G 234
G
Sbjct: 208 G 208
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 48
>gi|145332843|ref|NP_001078287.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|222423401|dbj|BAH19672.1| AT3G54840 [Arabidopsis thaliana]
gi|332645778|gb|AEE79299.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 193
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 105/172 (61%), Gaps = 32/172 (18%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L D T++FEIWDTAGQERY
Sbjct: 48 CIVLRFVRGQFDATSKVTVG---------ASFLSQTIALQDSTTVKFEIWDTAGQERYSA 98
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A+IVYDIT+ ++F +A+ WVK ELQ+
Sbjct: 99 LAPLYYRGAGVAVIVYDITSPESFKKAQYWVK---------------------ELQKHGS 137
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIF 217
P+IV+AL GNKADL +R V +G AE+NG+ F+ETSAKTA N+N++F
Sbjct: 138 PDIVMALVGNKADL-HEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLF 188
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 292 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 28 DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVG 67
>gi|440636052|gb|ELR05971.1| rab family, other [Geomyces destructans 20631-21]
Length = 236
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 97/178 (54%), Gaps = 40/178 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQ+A++VYD+T + +AK W
Sbjct: 49 AAFLTQKCNLPSRTIKFEIWDTAGQERFASLAPMYYRNAQSALVVYDLTKPTSLIKAKHW 108
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT-----SR------- 183
V E LQR A P IVIAL GNK DL SR
Sbjct: 109 VAE---------------------LQRQASPGIVIALVGNKLDLTNEAGEESRNDDGEEE 147
Query: 184 -------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R + +E +YA+E GLLF ETSAK NV E+F IA +P+ + +G
Sbjct: 148 DDNEGDSRKISTAEARSYADEEGLLFFETSAKLGTNVTEVFTAIANAIPETSLKGARG 205
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 49
>gi|134116396|ref|XP_773152.1| hypothetical protein CNBJ1470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255773|gb|EAL18505.1| hypothetical protein CNBJ1470 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 202
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 95/148 (64%), Gaps = 25/148 (16%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN--QDTFGRA 132
AAF+TQ+V L + T I+FEIWDTAGQERY +LAP+Y+RN+ AA+IVYDIT + +F +A
Sbjct: 40 AAFLTQSVKLSESTSIKFEIWDTAGQERYKSLAPIYFRNSNAAVIVYDITQPPETSFEKA 99
Query: 133 KSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGE 192
KSWV+E LQR A P+IVI L GNK D+ + R+ GE
Sbjct: 100 KSWVRE---------------------LQRQADPSIVIMLVGNKTDMESQRKT-SREIGE 137
Query: 193 AYAEENGLLFMETSAKTAMNVNEIFVEI 220
YA+E GLLF E SAKT V E+F+EI
Sbjct: 138 QYAKEEGLLFAEASAKTGEGVEELFMEI 165
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG------ECQSSHSISFSM-- 344
++ +KLVLLGESAVGKSSLVLRFVR +F +++ESTI + S SI F +
Sbjct: 2 SRTTSFKLVLLGESAVGKSSLVLRFVRNEFSDFRESTIAAFLTQSVKLSESTSIKFEIWD 61
Query: 345 -PTKNRLNNNVPITF 358
+ R + PI F
Sbjct: 62 TAGQERYKSLAPIYF 76
>gi|225716768|gb|ACO14230.1| Ras-related protein Rab-17 [Esox lucius]
Length = 240
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 30/183 (16%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
A++TQ VCL DVT+R EIWDTAGQE+YH++ P+YYR A A++VYDI+ +++F RA+ W
Sbjct: 75 AYLTQVVCLSDVTLRLEIWDTAGQEKYHSVTPLYYRGAHVALVVYDISKRESFIRAQLWP 134
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
+ELQ Q P + V+ L GNK DL R+ V EG A
Sbjct: 135 RELQ--------------------QHYVPGSTVMVLVGNKCDLSDIRQ-VTLQEGNRLAI 173
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG------RRLVET--AEAPKTS 248
+ GLLFMETSAK+ V+E+ + IA ++ K + QGG + LVE +E + S
Sbjct: 174 DRGLLFMETSAKSGNQVSELLLAIAHRV-KGNLTEYQGGLTESREKDLVELSRSETLQHS 232
Query: 249 NCC 251
+CC
Sbjct: 233 SCC 235
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 283 RIQRPNDQT---QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHE 324
R Q P T +KI + K+VLLG + VGKSSL LRF + F E
Sbjct: 23 RPQSPGVTTPTRDSKILRVKMVLLGSTGVGKSSLALRFSKNDFKE 67
>gi|290986334|ref|XP_002675879.1| rab family small GTPase [Naegleria gruberi]
gi|284089478|gb|EFC43135.1| rab family small GTPase [Naegleria gruberi]
Length = 880
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 97/150 (64%), Gaps = 23/150 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTV L+D ++FEIWDT+GQERY +L MY+R A AA++VYDIT+ ++F +A+ W
Sbjct: 48 AAFLTQTVPLEDRVVKFEIWDTSGQERYKSLPAMYFRGAYAALVVYDITDAESFIQAQKW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V +Q+ +VIALAGN A L +R VE E +AYA
Sbjct: 108 VTLVQQ----------------------GNSTLVIALAGNNAHLE-DKRQVETFEAKAYA 144
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
E++ L+FMETSA TA NVNEIF +A+K+P
Sbjct: 145 EKHSLIFMETSANTAQNVNEIFTALARKMP 174
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 290 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+T K YKL+LLG S+ GK++LVLRFVRG F E++ESTIG
Sbjct: 6 KTPPKFVSYKLILLGSSSTGKTNLVLRFVRGYFSEHEESTIGA 48
>gi|118093304|ref|XP_421874.2| PREDICTED: ras-related protein Rab-17 [Gallus gallus]
Length = 213
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 103/180 (57%), Gaps = 25/180 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
+F TQT+ L+ TI+ EIWDTAGQE+YH++ +YYR A AA++VYD+TN++T RAK W+
Sbjct: 54 SFFTQTIQLETATIKLEIWDTAGQEKYHSVCHLYYRGAHAALLVYDLTNKETLNRAKQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
EL++ P IVIAL GNK DL R V +GE +A
Sbjct: 114 MELEK--------------------EFLPDEIVIALVGNKTDLADERE-VAAEDGEEFAR 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ----GGRRLVETAEAPKTSNCCN 252
LLFMETSAK+ VN++F+ +A++L ++E G R+ ++ + CC+
Sbjct: 153 SRSLLFMETSAKSNHQVNDVFMAVAQELLRREGKKAAVPSTGDRQRLDLQASRTRRGCCH 212
>gi|401888794|gb|EJT52743.1| GTPase [Trichosporon asahii var. asahii CBS 2479]
Length = 196
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 115/207 (55%), Gaps = 27/207 (13%)
Query: 51 IWLKDRVDCMTQIVINVVFYPYLFS-AAFITQTVCLDDVT-IRFEIWDTAG---QERYHT 105
+ L + D Q+V + L++ AAF+TQTV LD+ T ++FEIWDT Y +
Sbjct: 10 VLLDEFSDFRVQVVCDADAAFLLYAGAAFLTQTVKLDEATNVKFEIWDTVSLPWSTCYKS 69
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+Y+RNA AAIIVYDIT PP +F +AK+WV+ELQR A
Sbjct: 70 LAPIYFRNANAAIIVYDITQ------------------PPET-SFDKAKAWVRELQRQAD 110
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
PNIVI L GNK DL S+R G+ +A+E GLLF E SAK+ V +F+EIAK LP
Sbjct: 111 PNIVIMLVGNKLDL-ASQRKTPRELGQQFAQEEGLLFCEASAKSGEGVESMFMEIAKALP 169
Query: 226 KKEVNNGQGGRRLV--ETAEAPKTSNC 250
GQ G V + EA NC
Sbjct: 170 LNAPKPGQQGGVKVNPQQQEAQSACNC 196
>gi|406860585|gb|EKD13643.1| Rab5-like protein ypt51 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 241
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 94/174 (54%), Gaps = 44/174 (25%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQ+A++VYD+T + +AK W
Sbjct: 47 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQSALVVYDLTKPTSLIKAKHW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT-------------- 181
V E LQR A P IVIAL GNK DL T
Sbjct: 107 VAE---------------------LQRQASPGIVIALVGNKLDLTTETSSTGNNLSEDGE 145
Query: 182 ---------SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
R V +E ++YAEE GLLF ETSAK NV E+F IA +P+
Sbjct: 146 GADGEDADGDARMVPTAEAKSYAEEEGLLFFETSAKLGTNVTEVFTAIANAIPE 199
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 47
>gi|384244624|gb|EIE18123.1| Rab5a Gtpase domain At 1.05 A resolution, partial [Coccomyxa
subellipsoidea C-169]
Length = 181
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 105/179 (58%), Gaps = 32/179 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + AAF++ +V L D T++FEIWDTAGQERY +
Sbjct: 16 CLVLRYVRGQFDANSKVTVG---------AAFMSHSVHLPDGTTVKFEIWDTAGQERYAS 66
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A AA +VYDIT+ ++F +AK W V ELQ+ A
Sbjct: 67 LAPLYYRGASAAAVVYDITSGESFQKAKHW---------------------VSELQKNAS 105
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
NI I L GNK+DL + +R V G+ YAE N +LF+ETSAKTA NV IF +A KL
Sbjct: 106 GNIAIILVGNKSDL-SEQREVTTETGQEYAERNSMLFIETSAKTAANVAAIFDTVAMKL 163
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSI 340
KLVLLG+S VGKS LVLR+VRGQF + T+G SHS+
Sbjct: 3 KLVLLGDSGVGKSCLVLRYVRGQFDANSKVTVGAAFM-SHSV 43
>gi|50288533|ref|XP_446696.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526004|emb|CAG59623.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 99/172 (57%), Gaps = 30/172 (17%)
Query: 76 AAFITQTVCL----DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGR 131
AAF++QTV + +DV I+FEIWDTAGQERY +LAPMYYRNA AA++VYD+T D+ +
Sbjct: 38 AAFLSQTVKIKDGNEDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDVTQPDSLSK 97
Query: 132 AKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEY 188
A+SWV+ELQ ++ +VI L GNK D+ S R +E
Sbjct: 98 AQSWVQELQN--------------------KVGDEELVIYLVGNKVDIVEADESARKIET 137
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL---PKKEVNNGQGGRR 237
EG YA+ LLF E SAKT V +IF EI ++L K + N RR
Sbjct: 138 EEGAEYAQAQKLLFKEVSAKTGAGVKDIFQEIGEQLYSTKKASLKNKDQSRR 189
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGA 38
>gi|19173399|ref|NP_597202.1| RAS-RELATED PROTEIN RAB5 [Encephalitozoon cuniculi GB-M1]
gi|449328868|gb|AGE95144.1| ras-related protein rab5 [Encephalitozoon cuniculi]
Length = 197
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 102/163 (62%), Gaps = 22/163 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + I+FEIWDTAGQERY++L PMYYR AQ A+IVYDIT+ ++F AK W
Sbjct: 47 ASFLTKTVFTQERGIKFEIWDTAGQERYNSLIPMYYRGAQVALIVYDITSVESFETAKRW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+EL G K P + L GNK+DL + R+ V+Y +G+ YA
Sbjct: 107 VEEL-----------GFEK----------PREFIKVLVGNKSDLDSDRK-VDYQQGKDYA 144
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRL 238
+ GLLF E+SAKT N+ EIF IA+++PK+E G RL
Sbjct: 145 DSQGLLFFESSAKTGKNIAEIFSAIAERVPKEETKKKTKGFRL 187
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K +K+V+LG +VGKSSLVL++V+G+F+ +ESTIG
Sbjct: 9 KTYTFKMVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGA 47
>gi|392512809|emb|CAD26378.2| RAS-RELATED PROTEIN RAB5 [Encephalitozoon cuniculi GB-M1]
Length = 190
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 102/163 (62%), Gaps = 22/163 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + I+FEIWDTAGQERY++L PMYYR AQ A+IVYDIT+ ++F AK W
Sbjct: 40 ASFLTKTVFTQERGIKFEIWDTAGQERYNSLIPMYYRGAQVALIVYDITSVESFETAKRW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+EL G K P + L GNK+DL + R+ V+Y +G+ YA
Sbjct: 100 VEEL-----------GFEK----------PREFIKVLVGNKSDLDSDRK-VDYQQGKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRL 238
+ GLLF E+SAKT N+ EIF IA+++PK+E G RL
Sbjct: 138 DSQGLLFFESSAKTGKNIAEIFSAIAERVPKEETKKKTKGFRL 180
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K +K+V+LG +VGKSSLVL++V+G+F+ +ESTIG
Sbjct: 2 KTYTFKMVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGA 40
>gi|113931342|ref|NP_001039118.1| RAB22A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89268938|emb|CAJ82023.1| RAB22A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 193
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 109/178 (61%), Gaps = 26/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVPHQNELHKFLIWDTAGQERFRALAPMYYRGSTAAIIVYDITKEETFLTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLNDVREVLE-KDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGRRLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI+K++P +G+G + +++E + CC
Sbjct: 138 DSINAVFVETSAKNAININELFIEISKRIPSANAGATSGKGFKLRRQSSEVER--RCC 193
>gi|115292103|gb|AAI21851.1| Unknown (protein for IMAGE:7654910) [Xenopus (Silurana) tropicalis]
Length = 160
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 109/178 (61%), Gaps = 26/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 7 ASFMTKTVPHQNELHKFLIWDTAGQERFRALAPMYYRGSTAAIIVYDITKEETFLTLKNW 66
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL R +E + + YA
Sbjct: 67 VKE---------------------LRQHGPPNIVVAIAGNKCDLNDVREVLE-KDAKDYA 104
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE--VNNGQGGRRLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI+K++P +G+G + +++E + CC
Sbjct: 105 DSINAVFVETSAKNAININELFIEISKRIPSANAGATSGKGFKLRRQSSEVER--RCC 160
>gi|429850247|gb|ELA25539.1| rab GTPase vps21 [Colletotrichum gloeosporioides Nara gc5]
Length = 241
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 95/185 (51%), Gaps = 45/185 (24%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK
Sbjct: 46 IGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAK 105
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS----------- 182
WV E LQR A P IVIAL GNK DL
Sbjct: 106 HWVAE---------------------LQRQASPGIVIALVGNKLDLTNGAGESAGSAGGD 144
Query: 183 -------------RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV 229
R V E + YAEE LLF ETSAKT NV E+F IA +P+ +
Sbjct: 145 AGEDADGEDGSGDARKVSTEEAKTYAEEESLLFFETSAKTGHNVTEVFTAIANAIPETSL 204
Query: 230 NNGQG 234
+ +G
Sbjct: 205 KSARG 209
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 47
>gi|317418736|emb|CBN80774.1| Ras-related protein Rab-22A [Dicentrarchus labrax]
Length = 194
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 111/179 (62%), Gaps = 27/179 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT +++F K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL +R E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLSDAREVPE-KDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE---VNNGQGGRRLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI+K++P + +G+G + + +E+ +T CC
Sbjct: 138 DSIHAIFVETSAKNAININEVFIEISKRIPIVDAAGATSGKGFKLGRQASESRRT--CC 194
>gi|320165409|gb|EFW42308.1| Rab31 protein [Capsaspora owczarzaki ATCC 30864]
Length = 201
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 111/178 (62%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+++T+ ++D T +++IWDTAGQE+Y LAPMYYRNA AAIIVY+IT + +F K W
Sbjct: 43 ASFMSKTLIVEDQTFKYQIWDTAGQEKYRGLAPMYYRNAAAAIIVYEITRKQSFEALKHW 102
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL++ FG P NI++A+AGNK+DL S+R V E + YA
Sbjct: 103 VKELRQ--------FG-------------PSNIILAIAGNKSDL-ESQRQVSSDEAKEYA 140
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLV-ETAEAPKTSNC 250
+ LF+ETSA TA NV+ +F ++K+LP++ + + +LV ET PK C
Sbjct: 141 DSIDALFVETSALTADNVSYLFEALSKRLPQESIAQPKPASTVQLVDETPNKPKNEKC 198
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS 336
+ KL LLG++ VGKSSLVLRFV F+E ESTIG S
Sbjct: 8 EVKLCLLGDAGVGKSSLVLRFVADSFNENSESTIGASFMS 47
>gi|340385904|ref|XP_003391448.1| PREDICTED: ras-related protein Rab-22A-like, partial [Amphimedon
queenslandica]
Length = 125
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 96/147 (65%), Gaps = 22/147 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+++++ +D+ TI+F+IWDTAGQERY +L PMYYRNA AAI+VYDITN+ +F + W
Sbjct: 1 ASFMSKSLTVDNSTIKFQIWDTAGQERYRSLLPMYYRNAAAAIVVYDITNEGSFTVLQDW 60
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
+ EL R + PPNIV+A+AGNK DL +R + +G+ YA
Sbjct: 61 IAELHR---------------------LGPPNIVLAIAGNKCDLE-DKREIPAEQGQTYA 98
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAK 222
E +F ETSA TA NV E+F+EI++
Sbjct: 99 SEVNAIFGETSALTARNVEEMFIEISE 125
>gi|221123404|ref|XP_002154758.1| PREDICTED: ras-related protein Rab-22A-like [Hydra magnipapillata]
Length = 196
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 103/176 (58%), Gaps = 31/176 (17%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYY 111
++ DR D + I A+F+++T+ L + + +++IWDTAGQE+Y +LAPMYY
Sbjct: 28 FVTDRFDIQSTATIG---------ASFMSKTISLGENSYKYQIWDTAGQEKYKSLAPMYY 78
Query: 112 RNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIA 171
R A AAI+VYD+T ++TF K+WV+ EL+ + PP +VIA
Sbjct: 79 RGAAAAIVVYDLTVENTFKSVKTWVR---------------------ELRELGPPGLVIA 117
Query: 172 LAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+AGNK+DL R V GE YA E G +F E SA T+ NV IF EI KKLP++
Sbjct: 118 IAGNKSDLKDQRE-VSLEAGENYASEIGAVFAEVSALTSQNVAYIFQEITKKLPEE 172
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS 336
+ KL LLG+S VGKSSLVLRFV +F +TIG S
Sbjct: 8 EIKLCLLGDSGVGKSSLVLRFVTDRFDIQSTATIGASFMS 47
>gi|336376939|gb|EGO05274.1| hypothetical protein SERLA73DRAFT_174346 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389987|gb|EGO31130.1| hypothetical protein SERLADRAFT_455824 [Serpula lacrymans var.
lacrymans S7.9]
Length = 211
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 99/151 (65%), Gaps = 23/151 (15%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LDD T++FEIWDTAGQERY + APMYYRNA A++VYDIT + +A++
Sbjct: 41 AAFLTQTVTLDDQSTVKFEIWDTAGQERYKSQAPMYYRNANCAVVVYDITQSASLEKART 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++E LQR A P+IVIAL GNK DL ++RR V E + Y
Sbjct: 101 WIRE---------------------LQRQADPSIVIALCGNKTDL-SARRQVTQEEAKKY 138
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
AEE GL++ ETSAK+ V +IF IAKKLP
Sbjct: 139 AEEEGLMWGETSAKSGEGVADIFTAIAKKLP 169
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQYQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|255720040|ref|XP_002556300.1| KLTH0H09768p [Lachancea thermotolerans]
gi|238942266|emb|CAR30438.1| KLTH0H09768p [Lachancea thermotolerans CBS 6340]
Length = 229
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 116/197 (58%), Gaps = 33/197 (16%)
Query: 69 FYPYLFSAAFITQTVCLD---DVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F AAF++QT+ L+ DVTI+FEIWDTAGQERY +LAPMYYRNA AA+IVYD+T
Sbjct: 53 FRESTIGAAFLSQTIKLEKHPDVTIKFEIWDTAGQERYKSLAPMYYRNANAALIVYDVTQ 112
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTS 182
+ +A+SWV+EL+ ++ ++VI LAGNK D+ +
Sbjct: 113 PGSLVKAQSWVEELK--------------------NKVGDQDLVICLAGNKVDICDEDAT 152
Query: 183 RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK---EVNNGQGGRRLV 239
R V+ + + YA+E GLLF ETSAKT V+ IF EI +++ +K EV + R+ +
Sbjct: 153 AREVQREDAQLYAQEQGLLFYETSAKTGAGVSAIFQEIGERVYQKKGMEVPSSTQARKPL 212
Query: 240 ETA-EAPKTSN---CCN 252
+ P T++ CC+
Sbjct: 213 NVELQRPSTNDSTSCCS 229
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
A + Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 21 ATMLQFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGA 60
>gi|4678309|emb|CAB41100.1| small GTP-binding protein-like (fragment) [Arabidopsis thaliana]
Length = 224
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 107/180 (59%), Gaps = 32/180 (17%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L D T++FEIWDTAGQERY
Sbjct: 46 CIVLRFVRGQFDATSKVTVG---------ASFLSQTIALQDSTTVKFEIWDTAGQERYSA 96
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A+IVYDIT+ ++F +A+ WVK ELQ+
Sbjct: 97 LAPLYYRGAGVAVIVYDITSPESFKKAQYWVK---------------------ELQKHGS 135
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
P+IV+AL GNKADL +R V +G AE+NG+ F+ETSAKTA N+N++F LP
Sbjct: 136 PDIVMALVGNKADL-HEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEVCTSFLP 194
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 29/41 (70%)
Query: 292 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 26 DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGA 66
>gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134023906|gb|AAI35942.1| rab31 protein [Xenopus (Silurana) tropicalis]
Length = 194
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QDTF K W
Sbjct: 40 ASFMTKTVPSGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDTFHTLKKW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL +R V + YA
Sbjct: 100 V---------------------KELKEHGPENIVMAIAGNKCDLSDTRE-VTMKDAREYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
E G + +ETSAK A+NV E+F I++++P + + NG G + T+ CC
Sbjct: 138 ESIGAIVVETSAKNAINVEELFQGISRRIPPLDPHENGSNGAMKLGRQSFQSTTRCC 194
>gi|50557054|ref|XP_505935.1| YALI0F27181p [Yarrowia lipolytica]
gi|49651805|emb|CAG78747.1| YALI0F27181p [Yarrowia lipolytica CLIB122]
Length = 207
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 96/151 (63%), Gaps = 23/151 (15%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV L+D T+RFEIWDTAGQERY +LAPMYYRNA A++VYDIT + R+K+
Sbjct: 49 AAFLTQTVSLEDNKTVRFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLERSKA 108
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W VKELQ A I+I LAGNK DL +R V E AY
Sbjct: 109 W---------------------VKELQHRAADGIIIGLAGNKLDLE-DKREVPTEEARAY 146
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
AEE GLLF ETSA T NV E+F EIA+K+P
Sbjct: 147 AEEAGLLFFETSALTGENVLELFTEIARKVP 177
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
P +Q + Q+KLVLLGES VGKSSLV RFV+ +F E +ESTIG
Sbjct: 4 PRTSSQERFAQFKLVLLGESFVGKSSLVTRFVKDEFLEQRESTIGA 49
>gi|407044250|gb|EKE42471.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 195
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 95/160 (59%), Gaps = 23/160 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+T+T+ +D TI+FEIWDTAGQERYH+L PMYYR + AA++VYDIT+ +
Sbjct: 36 FQENTIGAAFLTKTLIVDGDTIKFEIWDTAGQERYHSLTPMYYRGSNAALVVYDITSDSS 95
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F +AK W+ EL R + VI L GNK DL S R +
Sbjct: 96 FIQAKKWIDEL----------------------RGSGNEAVIFLVGNKCDLADS-RVITK 132
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
E E YA + ++ETSAK +NVNE+F +IA+KLP+ E
Sbjct: 133 EEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRNE 172
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 31/36 (86%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+K+VLLG+S+VGKSS+VLR + ++ E+QE+TIG
Sbjct: 8 QFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGA 43
>gi|67480015|ref|XP_655377.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537437|dbj|BAB40673.1| small GTPase Rab5 [Entamoeba histolytica]
gi|56472508|gb|EAL49990.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 195
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 95/160 (59%), Gaps = 23/160 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+T+T+ +D TI+FEIWDTAGQERYH+L PMYYR + AA++VYDIT+ +
Sbjct: 36 FQENTIGAAFLTKTLIVDGETIKFEIWDTAGQERYHSLTPMYYRGSNAALVVYDITSDSS 95
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F +AK W+ EL R + +I L GNK DL S R +
Sbjct: 96 FIQAKKWIDEL----------------------RGSGNEAIIFLVGNKCDLDNS-RVITK 132
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
E E YA + ++ETSAK +NVNE+F +IA+KLP+ E
Sbjct: 133 EEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRNE 172
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 33/42 (78%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
++ Q+K+VLLG+S+VGKSS+VLR + ++ E+QE+TIG
Sbjct: 2 SEGNTYQFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGA 43
>gi|58259926|ref|XP_567373.1| GTPase [Cryptococcus neoformans var. neoformans JEC21]
gi|57229423|gb|AAW45856.1| GTPase, putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 175
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 94/147 (63%), Gaps = 25/147 (17%)
Query: 77 AFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDIT--NQDTFGRAK 133
AF+TQ+V L + T I+FEIWDTAGQERY +LAP+Y+RN+ AA+IVYDIT + +F +AK
Sbjct: 14 AFLTQSVKLSESTSIKFEIWDTAGQERYKSLAPIYFRNSNAAVIVYDITQVSDTSFEKAK 73
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
SWV+EL QR A P+IVI L GNK D+ + R+ GE
Sbjct: 74 SWVREL---------------------QRQADPSIVIMLVGNKTDMESQRK-TSREIGEQ 111
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEI 220
YA+E GLLF E SAKT V E+F+EI
Sbjct: 112 YAKEEGLLFAEASAKTGEGVEELFMEI 138
>gi|340382595|ref|XP_003389804.1| PREDICTED: ras-related protein Rab-22A-like [Amphimedon
queenslandica]
Length = 195
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 105/175 (60%), Gaps = 25/175 (14%)
Query: 59 CMTQIVINVVFY---PYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQ 115
C+ ++ VF P AAF T+T+ ++D +I F+IWDTAGQE+Y LAPMYYR +
Sbjct: 20 CIVNRFVSDVFSDKEPLTVGAAFSTKTIQVNDHSILFQIWDTAGQEKYRGLAPMYYRGSA 79
Query: 116 AAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGN 175
AA++VYDITN +F +SW++EL +++ PPN+V+A+AGN
Sbjct: 80 AAVVVYDITNLKSFIEMQSWIQEL---------------------RQLGPPNLVLAIAGN 118
Query: 176 KADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN 230
K D+ SR+ V S+GE YA+ +FME SAK NV ++F IA +P ++N
Sbjct: 119 KLDISESRQ-VTASKGEEYAKSVNAIFMECSAKDDTNVKDLFSRIADTIPLDKLN 172
>gi|254580657|ref|XP_002496314.1| ZYRO0C15554p [Zygosaccharomyces rouxii]
gi|238939205|emb|CAR27381.1| ZYRO0C15554p [Zygosaccharomyces rouxii]
Length = 211
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 107/190 (56%), Gaps = 34/190 (17%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V + + T++FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT +F +A+ W
Sbjct: 42 AAFLTQRVNIGEQTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS--RRCVEYSEGEA 193
VKEL A IVIAL GNK D+ + R V E E
Sbjct: 102 ---------------------VKELHEQASKGIVIALVGNKLDMIENGGERKVAKEEAEK 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK---EVNNGQGGRR--------LVETA 242
AEE GLLF ETSAK+ NVNE+F+ I +K+P K E N Q G R L +
Sbjct: 141 LAEEEGLLFFETSAKSGENVNEVFLGIGEKIPIKKPGEQANEQSGLRITDDQRVDLTNSV 200
Query: 243 EAPKTSNCCN 252
P S CN
Sbjct: 201 NGPVRSAGCN 210
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+ + KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 3 SSVTSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIG 41
>gi|320593406|gb|EFX05815.1| rab GTPase vps21 [Grosmannia clavigera kw1407]
Length = 240
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 91/171 (53%), Gaps = 41/171 (23%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 46 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 105
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
V E LQR A P IVIAL GNK DL
Sbjct: 106 VAE---------------------LQRQASPGIVIALVGNKLDLTDSGGAATPNPDAEAG 144
Query: 180 ----PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
T R V E YA+E LLF ETSAKT NV E+F IA +P+
Sbjct: 145 DEAESTDARKVSTEEARTYADEESLLFFETSAKTGTNVAEVFTAIANAIPE 195
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 46
>gi|427784137|gb|JAA57520.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 191
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 92/150 (61%), Gaps = 22/150 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+ + + L D T +F IWDTAGQERY LAPMYYR A AA+IVYDIT+ ++F +SW
Sbjct: 41 ASFMMKNLVLHDRTFKFNIWDTAGQERYRALAPMYYRGAGAAVIVYDITSMESFNAVQSW 100
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V +ELQ PNIV+ +AGNK DL R V + GE+YA
Sbjct: 101 V---------------------RELQLHGDPNIVLGIAGNKCDLEDHRE-VSLATGESYA 138
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
++G +F+ETSA A N+ E+F+ IA K+P
Sbjct: 139 HQHGAVFVETSALKATNIQELFMGIAMKVP 168
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 288 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
N T+ K+C LLG+S VGKSS++ RFV F+ ESTIG
Sbjct: 2 NTTTEVKVC-----LLGDSGVGKSSILQRFVYNTFNSSAESTIGA 41
>gi|410083613|ref|XP_003959384.1| hypothetical protein KAFR_0J01850 [Kazachstania africana CBS 2517]
gi|372465975|emb|CCF60249.1| hypothetical protein KAFR_0J01850 [Kazachstania africana CBS 2517]
Length = 209
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 104/168 (61%), Gaps = 24/168 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V +++ TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT +F +A+ W
Sbjct: 42 AAFLTQRVNINNNTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEYSEGE 192
VKEL A +I+IAL GNK D+ S R V EGE
Sbjct: 102 ---------------------VKELHEQASKDIIIALVGNKVDIIENDESERKVAREEGE 140
Query: 193 AYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE 240
AEE GL+F ETSAKTA NVN++F+ I +K+P K N+ + E
Sbjct: 141 RLAEEEGLIFFETSAKTAENVNDVFLNIGEKIPLKNDNSSPNDTTITE 188
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 28/38 (73%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
I KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 ITSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGA 42
>gi|213514424|ref|NP_001134194.1| Ras-related protein Rab-22A [Salmo salar]
gi|209731382|gb|ACI66560.1| Ras-related protein Rab-22A [Salmo salar]
Length = 195
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 97/150 (64%), Gaps = 22/150 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT +D+F K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEDSFQTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL +R E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLSDAREVSE-KDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
+ +F+ETSAK A+N+NE+F+EI++++P
Sbjct: 138 DSIHAIFVETSAKNAININEVFIEISQRIP 167
>gi|269861848|ref|XP_002650604.1| hypothetical protein EBI_21682 [Enterocytozoon bieneusi H348]
gi|220065897|gb|EED43454.1| hypothetical protein EBI_21682 [Enterocytozoon bieneusi H348]
Length = 191
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 96/158 (60%), Gaps = 22/158 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+T+TV +D ++FEIWDTAGQERY++L PMYYR A AA++VYDIT+ ++F RAK
Sbjct: 46 AAFLTKTVFIDGTAVKFEIWDTAGQERYYSLIPMYYRGANAALVVYDITSAESFERAK-- 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
W+++L+ P N + L GNK DL + E G+ YA
Sbjct: 104 -------------------RWIEDLKTEKPDNFMKVLIGNKVDLSEAAVITE-EMGKQYA 143
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ 233
E+ GLLF +TSAKT + ++F+E+A LPK + + Q
Sbjct: 144 EQEGLLFYQTSAKTGEGIKDLFLELATILPKDQAKSNQ 181
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+KLV+LG +VGKSS+VL F++ +F+ +ESTIG
Sbjct: 12 FKLVILGHYSVGKSSIVLNFIKNEFNPNEESTIGA 46
>gi|146417699|ref|XP_001484817.1| hypothetical protein PGUG_02546 [Meyerozyma guilliermondii ATCC
6260]
gi|146390290|gb|EDK38448.1| hypothetical protein PGUG_02546 [Meyerozyma guilliermondii ATCC
6260]
Length = 209
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 108/188 (57%), Gaps = 34/188 (18%)
Query: 76 AAFITQTVCLDDV--TIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ+V L ++ T++FEIWDTAGQERY +LAPMYYRNA AA+ VYDITN +F +A+
Sbjct: 44 AAFLTQSVTLPEINATVKFEIWDTAGQERYKSLAPMYYRNAHAALCVYDITNSSSFQKAQ 103
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
+W+ KEL++ AP IVI L GNKADL R+ V+ + A
Sbjct: 104 NWI---------------------KELKKQAPEGIVICLVGNKADLEDERQ-VDANAVTA 141
Query: 194 YAEE---NGLLFM--ETSAKTAMNVNEIFVEIAKKLPKKEVNNG----QGGRRL-VETAE 243
Y EE G+ E SAK+ V EIF +AK LP +E NG GR+ VE
Sbjct: 142 YVEELRGEGIQVFTEECSAKSGEGVLEIFTNVAKALPVEETINGASKPSAGRQSGVELNR 201
Query: 244 APKTSNCC 251
P+ CC
Sbjct: 202 RPQQQGCC 209
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+V RFV+ F +ESTIG
Sbjct: 6 RFAQFKLVLLGESAVGKSSVVHRFVKNTFDNMRESTIGA 44
>gi|307105820|gb|EFN54068.1| hypothetical protein CHLNCDRAFT_25172 [Chlorella variabilis]
Length = 167
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 22/148 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F T+T+ + ++FEIWDTAGQERYH+LAPMYYR A AAI+VYD+T+ +F RAK W
Sbjct: 42 ASFFTKTIP--EKHVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDVTHPASFERAKKW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V EL+ Q + PN++IAL GNK DL R V ++ YA
Sbjct: 100 VWELR--------------------QNVQNPNLIIALVGNKVDLAEEARAVPEADARTYA 139
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKK 223
E GLLF E SA T +NV E+F E+A K
Sbjct: 140 AETGLLFFEASAMTNVNVVELFDEVADK 167
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 30/39 (76%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
++ Q KLVLLGE GK+SLV RFVRGQ+ E QESTIG
Sbjct: 4 QLVQSKLVLLGEMGSGKTSLVQRFVRGQYFENQESTIGA 42
>gi|169617289|ref|XP_001802059.1| hypothetical protein SNOG_11822 [Phaeosphaeria nodorum SN15]
gi|160703379|gb|EAT80866.2| hypothetical protein SNOG_11822 [Phaeosphaeria nodorum SN15]
Length = 261
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 96/188 (51%), Gaps = 48/188 (25%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT + +A+
Sbjct: 64 IGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPSSLTKAQ 123
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS----------- 182
WV EL R A P IVIAL GNK+DL T+
Sbjct: 124 HWV---------------------AELHRQASPGIVIALVGNKSDLATAGGEDVTEDADD 162
Query: 183 ----------------RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
R V +AYAEE LLF ETSAKT NV E+F IA +P+
Sbjct: 163 APAAEGEDATEEDGADARRVPVKTAKAYAEEESLLFFETSAKTGQNVAEVFTAIANAIPE 222
Query: 227 KEVNNGQG 234
+ +G
Sbjct: 223 TSLKGPRG 230
>gi|294950399|ref|XP_002786610.1| Rab5, putative [Perkinsus marinus ATCC 50983]
gi|239900902|gb|EER18406.1| Rab5, putative [Perkinsus marinus ATCC 50983]
Length = 226
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 97/170 (57%), Gaps = 28/170 (16%)
Query: 59 CMTQIVINVVFYPY---LFSAAFITQTVCL---DDVTIRFEIWDTAGQERYHTLAPMYYR 112
CM FY Y AAF+TQTV V I+FEIWDTAGQERY +LAPMYYR
Sbjct: 37 CMVVRFARGEFYEYQEPTIGAAFMTQTVSPFPDSPVQIKFEIWDTAGQERYRSLAPMYYR 96
Query: 113 NAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIAL 172
A AA++VYDIT++++F AK WV EL+ P++VIA
Sbjct: 97 GAAAAVVVYDITSRESFEGAK---------------------RWVNELRSSHNPDVVIAF 135
Query: 173 AGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAK 222
GNK+DL R V G YA+EN LLF+ETSAKT NV+ +FVEI +
Sbjct: 136 CGNKSDLAEERE-VPTQRGAEYAQENDLLFVETSAKTGANVHHVFVEIGQ 184
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
T + +KLVLLG+++VGKS +V+RF RG+F+EYQE TIG
Sbjct: 16 TPLTVLHHKLVLLGDASVGKSCMVVRFARGEFYEYQEPTIGA 57
>gi|258564008|ref|XP_002582749.1| vacuolar protein sorting-associated protein 21 [Uncinocarpus reesii
1704]
gi|237908256|gb|EEP82657.1| vacuolar protein sorting-associated protein 21 [Uncinocarpus reesii
1704]
Length = 264
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 94/190 (49%), Gaps = 60/190 (31%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 50 AAFLTQKCSLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPSSLTKAKHW 109
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
V E LQR A P IVIAL GNK DL
Sbjct: 110 VAE---------------------LQRQASPGIVIALVGNKLDLTNDGNGEGPPSANDTA 148
Query: 180 -----------------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEI 216
P R + E +YA+E GLLF ETSAKT +NV E+
Sbjct: 149 EAAESSSADGGDEEENPGEQATTPGDARKISTQEASSYADEEGLLFFETSAKTGVNVAEV 208
Query: 217 FVEIAKKLPK 226
F IA +P+
Sbjct: 209 FTAIANAIPE 218
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNDDFQENKEPTIG 49
>gi|269866354|ref|XP_002652244.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi H348]
gi|220062888|gb|EED41812.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi H348]
Length = 196
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 96/158 (60%), Gaps = 22/158 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+T+TV +D ++FEIWDTAGQERY++L PMYYR A AA++VYDIT+ ++F RAK
Sbjct: 46 AAFLTKTVFIDGTAVKFEIWDTAGQERYYSLIPMYYRGANAALVVYDITSAESFERAK-- 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
W+++L+ P N + L GNK DL + E G+ YA
Sbjct: 104 -------------------RWIEDLKTEKPDNFMKVLIGNKVDLSEAAVITE-EMGKQYA 143
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ 233
E+ GLLF +TSAKT + ++F+E+A LPK + + Q
Sbjct: 144 EQEGLLFYQTSAKTGEGIKDLFLELATILPKDQAKSNQ 181
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+KLV+LG +VGKSS+VL F++ +F+ +ESTIG
Sbjct: 12 FKLVILGHYSVGKSSIVLNFIKNEFNPNEESTIGA 46
>gi|12852239|dbj|BAB29331.1| unnamed protein product [Mus musculus]
Length = 194
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 107/178 (60%), Gaps = 25/178 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT +TF ++W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKAETFSTLENW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+EL++ P ++V+A+AGNK DL R +E + + YA
Sbjct: 100 ---------------------VRELRQHGPHSMVVAIAGNKCDLTDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--RLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F+EI++++P + N GG+ +L PK S CC
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIPSTDANPASGGKGFKLRRQPSEPKRS-CC 194
>gi|444315776|ref|XP_004178545.1| hypothetical protein TBLA_0B01820 [Tetrapisispora blattae CBS 6284]
gi|387511585|emb|CCH59026.1| hypothetical protein TBLA_0B01820 [Tetrapisispora blattae CBS 6284]
Length = 212
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 96/154 (62%), Gaps = 23/154 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V + + TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T +F +A+ W
Sbjct: 42 AAFLTQRVNIGNHTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--PTSRRCVEYSEGEA 193
VKELQ A I+IAL GNKAD+ R V E E
Sbjct: 102 ---------------------VKELQEQANKGIIIALVGNKADIIEDGEERKVAREEAEK 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
AEE GLLF ETSAKT NVNE F+ I +K+P K
Sbjct: 141 LAEEEGLLFFETSAKTGNNVNETFLAIGEKIPLK 174
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS------SHSISFSM 344
+ + KLVLLGE+AVGKSS+VLRFV F E +E TIG + +H+I F +
Sbjct: 3 SNVTSVKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIGNHTIKFEI 60
>gi|150951304|ref|XP_001387608.2| GTP-binding protein of the rab/ypt family [Scheffersomyces stipitis
CBS 6054]
gi|149388482|gb|EAZ63585.2| GTP-binding protein of the rab/ypt family, partial [Scheffersomyces
stipitis CBS 6054]
Length = 212
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 100/161 (62%), Gaps = 29/161 (18%)
Query: 76 AAFITQTVCLDD--VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQT+ L + TI+FEIWDTAGQERY +LAPMYYRNA AA+ VYDIT++ +FG+A+
Sbjct: 41 AAFLTQTINLPESKTTIKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFGKAQ 100
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
W+K EL++ AP IVIAL GNK+DL SR V+ +E E
Sbjct: 101 DWIK---------------------ELKKQAPEGIVIALVGNKSDLEESRE-VDSAEVEE 138
Query: 194 YAEE-----NGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV 229
Y ++ N ++ + SAK+ V EIF +I + LP EV
Sbjct: 139 YVQQANEDGNTIIISDCSAKSGQGVLEIFTQIGRALPVDEV 179
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 3 KFAQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGA 41
>gi|426201327|gb|EKV51250.1| GTP-binding protein RAB5 [Agaricus bisporus var. bisporus H97]
Length = 207
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 101/165 (61%), Gaps = 28/165 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LDD T++FEIWDTAGQERY APMYYRNA A++VYDIT + +A++
Sbjct: 41 AAFLTQTVTLDDQTTVKFEIWDTAGQERYK--APMYYRNANCAVVVYDITQSSSLEKART 98
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++EL QR A PNIVI L GNK+DL +RR V E + Y
Sbjct: 99 WIREL---------------------QRQADPNIVITLCGNKSDLD-ARRQVTQEEAKKY 136
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP---KKEVNNGQGGR 236
AEE GL++ ETSAK+ V E+F IAKKLP +G G R
Sbjct: 137 AEEEGLMWAETSAKSGEGVTEVFTAIAKKLPLTASPSARSGAGSR 181
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 35/39 (89%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIG 40
>gi|345803388|ref|XP_850610.2| PREDICTED: ras-related protein Rab-31 [Canis lupus familiaris]
Length = 195
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 102/179 (56%), Gaps = 23/179 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 99 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
YAE G + +ETSAK A+N+ E+F I++++P + + NG G + P + CC
Sbjct: 137 YAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGAIKLGKPPTPASRRCC 195
>gi|452988129|gb|EME87884.1| hypothetical protein MYCFIDRAFT_70380 [Pseudocercospora fijiensis
CIRAD86]
Length = 245
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 98/187 (52%), Gaps = 46/187 (24%)
Query: 65 INVVFYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVY 121
+N F P AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQ+A++VY
Sbjct: 37 VNDDFQPNKEPTIGAAFLTQKCQLPTRTIKFEIWDTAGQERFASLAPMYYRNAQSALVVY 96
Query: 122 DITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-- 179
DIT + +AK WV E LQR A P IVIAL GNK DL
Sbjct: 97 DITKPSSLTKAKHWVAE---------------------LQRQASPGIVIALVGNKLDLCD 135
Query: 180 --------------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVE 219
+ R V E ++YA+E LLF ETSAKT NV+E+F
Sbjct: 136 DDNAATDAQDAEAENETEEDAGTVRKVTTKEAKSYADEENLLFFETSAKTGHNVSEVFTA 195
Query: 220 IAKKLPK 226
IA +P+
Sbjct: 196 IANAIPE 202
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG-----ECQ-SSHSISFSM 344
KLVLLGE+AVGKSSLVLRFV F +E TIG +CQ + +I F +
Sbjct: 18 KLVLLGEAAVGKSSLVLRFVNDDFQPNKEPTIGAAFLTQKCQLPTRTIKFEI 69
>gi|66811300|ref|XP_639358.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74996983|sp|Q54RX9.1|RAB5B_DICDI RecName: Full=Putative ras-related protein Rab-5B
gi|60467992|gb|EAL66003.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 99/169 (58%), Gaps = 26/169 (15%)
Query: 59 CMTQIVINVVFYPY--LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQA 116
C++ ++ F P AAF+ +++ +D++ I+ EIWDTAGQERY +L PMYYR A A
Sbjct: 64 CISSRLVRNEFGPTDSTIGAAFLVKSMVVDNINIKLEIWDTAGQERYRSLTPMYYRGAAA 123
Query: 117 AIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNK 176
A++VYDIT ++TF K WV E LQ+ A PN+++ALAGNK
Sbjct: 124 AVVVYDITKKNTFETLKRWVSE---------------------LQKHASPNLILALAGNK 162
Query: 177 ADLPTSRRCVEYSEGEAYAEENG-LLFMETSAKTAMNVNEIFVEIAKKL 224
DLP R V+ E Y E G +F ETSA + N+NE+F EI ++L
Sbjct: 163 VDLPN--REVQVDEVNRYISELGNAIFFETSAASGQNINELFTEICRRL 209
>gi|367012131|ref|XP_003680566.1| hypothetical protein TDEL_0C04660 [Torulaspora delbrueckii]
gi|359748225|emb|CCE91355.1| hypothetical protein TDEL_0C04660 [Torulaspora delbrueckii]
Length = 211
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 107/190 (56%), Gaps = 34/190 (17%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V + D T++FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T +F +A+ W
Sbjct: 42 AAFLTQRVNIGDETVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS--RRCVEYSEGEA 193
VKEL A I+IAL GNK D+ S R V E E
Sbjct: 102 ---------------------VKELHEQASKGIIIALVGNKIDVLESGEERKVAREEAEK 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN---NGQGGRR--------LVETA 242
AEE LL+ ETSAKT NVNE+F+ I +K+P K+ N Q G R L +
Sbjct: 141 LAEEENLLYFETSAKTGENVNEVFLAIGEKIPLKKAEDQANQQHGLRITDDQRIDLASST 200
Query: 243 EAPKTSNCCN 252
P ++ CN
Sbjct: 201 NGPVKASGCN 210
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 29/40 (72%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ I KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 3 SSITSVKLVLLGEAAVGKSSIVLRFVSNDFTENKEPTIGA 42
>gi|417396875|gb|JAA45471.1| Putative gtpase [Desmodus rotundus]
Length = 195
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 102/179 (56%), Gaps = 23/179 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 99 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
YAE G + +ETSAK A+N+ E+F I++++P + + NG G + P + CC
Sbjct: 137 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGGIKLGKPTMPASRRCC 195
>gi|45185604|ref|NP_983320.1| ACL084Cp [Ashbya gossypii ATCC 10895]
gi|44981322|gb|AAS51144.1| ACL084Cp [Ashbya gossypii ATCC 10895]
gi|374106525|gb|AEY95434.1| FACL084Cp [Ashbya gossypii FDAG1]
Length = 207
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 99/156 (63%), Gaps = 23/156 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V +D TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT + +S+
Sbjct: 42 AAFLTQRVNMDSKTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDIT------KPQSF 95
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS--RRCVEYSEGEA 193
+K A+ WVKEL A IVIAL GNK DL + R V E E
Sbjct: 96 IK---------------ARHWVKELHEQASKGIVIALVGNKLDLLENGEARKVSREEAEK 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV 229
AEE GLLF ETSAKT +NE+F+ I +K+P +V
Sbjct: 141 LAEEEGLLFFETSAKTGDKINEVFLAIGEKIPLAKV 176
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ + KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 3 SNVTSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGA 42
>gi|62898742|dbj|BAD97225.1| RAB31, member RAS oncogene family variant [Homo sapiens]
Length = 195
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 102/179 (56%), Gaps = 23/179 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 99 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
YAE G + +ETSAK A+N+ E+F I++++P + + NG G VE + CC
Sbjct: 137 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTVKVEKPTMQASRRCC 195
>gi|1457954|gb|AAC50773.1| Rab22b [Homo sapiens]
Length = 194
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 102/177 (57%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 40 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL R V + + YA
Sbjct: 100 V---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKEYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
E G + +ETSAK A+N+ E+F I++++P + + NG G VE + CC
Sbjct: 138 ESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPTMQSSRRCC 194
>gi|54696912|gb|AAV38828.1| RAB31, member RAS oncogene family [synthetic construct]
gi|54696914|gb|AAV38829.1| RAB31, member RAS oncogene family [synthetic construct]
gi|60830380|gb|AAX36926.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61366036|gb|AAX42804.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61366043|gb|AAX42805.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 195
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 102/179 (56%), Gaps = 23/179 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 38 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK 97
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 98 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 135
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
YAE G + +ETSAK A+N+ E+F I++++P + + NG G VE + CC
Sbjct: 136 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPTMQASRRCC 194
>gi|242784469|ref|XP_002480393.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces stipitatus ATCC
10500]
gi|242784474|ref|XP_002480394.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces stipitatus ATCC
10500]
gi|218720540|gb|EED19959.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces stipitatus ATCC
10500]
gi|218720541|gb|EED19960.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces stipitatus ATCC
10500]
Length = 261
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 111/243 (45%), Gaps = 65/243 (26%)
Query: 37 SMMSGKRQSDCMAQIWLKDRVDCMTQIVINVVFYPY------LFSAAFITQTVCLDDVTI 90
S +G + S + + L + + +V+ V + AAF+TQ L I
Sbjct: 4 SAPAGSKPSSSVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCSLPTRMI 63
Query: 91 RFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTF 150
+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + S VK
Sbjct: 64 KFEIWDTAGQERFASLAPMYYRNAQAALVVYDLT------KPASLVK------------- 104
Query: 151 GRAKSWVKELQRMAPPNIVIALAGNKADLP------------------------------ 180
AK WV ELQR A P IVIAL GNK DL
Sbjct: 105 --AKHWVAELQRQASPGIVIALVGNKLDLTDSGAGQANEDAAEAENNGVPGPDAEGDEEV 162
Query: 181 --------TSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG 232
T R + E YAEE GLLF ETSAKT NV E+F IA +P+ +
Sbjct: 163 ENNDISTTTDARKISTREASTYAEEEGLLFFETSAKTGYNVAEVFTAIANAIPETSLKGA 222
Query: 233 QGG 235
+ G
Sbjct: 223 KSG 225
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 48
>gi|388454460|ref|NP_001253365.1| ras-related protein Rab-31 [Macaca mulatta]
gi|402902630|ref|XP_003914202.1| PREDICTED: ras-related protein Rab-31-like [Papio anubis]
gi|380809112|gb|AFE76431.1| ras-related protein Rab-31 [Macaca mulatta]
gi|384945010|gb|AFI36110.1| ras-related protein Rab-31 [Macaca mulatta]
Length = 194
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 108/180 (60%), Gaps = 26/180 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 99 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVE-TAEAPKTSNCC 251
YAE G + +ETSAK A+N+ E+F I++++P + + NG G +LV+ T++A + CC
Sbjct: 137 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGIKLVKPTSQASR--RCC 194
>gi|61372802|gb|AAX43915.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 196
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 102/179 (56%), Gaps = 23/179 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 99 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
YAE G + +ETSAK A+N+ E+F I++++P + + NG G VE + CC
Sbjct: 137 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPTMQASRRCC 195
>gi|33589861|ref|NP_006859.2| ras-related protein Rab-31 [Homo sapiens]
gi|332849489|ref|XP_523865.3| PREDICTED: uncharacterized protein LOC468476 isoform 2 [Pan
troglodytes]
gi|426385456|ref|XP_004059230.1| PREDICTED: ras-related protein Rab-31 [Gorilla gorilla gorilla]
gi|9963781|gb|AAG09690.1|AF183421_1 small GTP-binding protein rab22b [Homo sapiens]
gi|12654623|gb|AAH01148.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|60655513|gb|AAX32320.1| RAB31 member RAS oncogene family [synthetic construct]
gi|119622001|gb|EAX01596.1| RAB31, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|123984139|gb|ABM83504.1| RAB31, member RAS oncogene family [synthetic construct]
gi|123998237|gb|ABM86720.1| RAB31, member RAS oncogene family [synthetic construct]
gi|410217198|gb|JAA05818.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410266338|gb|JAA21135.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308006|gb|JAA32603.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308008|gb|JAA32604.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308010|gb|JAA32605.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352351|gb|JAA42779.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352353|gb|JAA42780.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352355|gb|JAA42781.1| RAB31, member RAS oncogene family [Pan troglodytes]
Length = 195
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 102/179 (56%), Gaps = 23/179 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 99 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
YAE G + +ETSAK A+N+ E+F I++++P + + NG G VE + CC
Sbjct: 137 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPTMQASRRCC 195
>gi|444317893|ref|XP_004179604.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS 6284]
gi|387512645|emb|CCH60085.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS 6284]
Length = 220
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 97/158 (61%), Gaps = 24/158 (15%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF++QT+ L + T I+FEIWDTAGQERY +LAPMYYRNA AA++VYDIT D+ +A+S
Sbjct: 38 AAFLSQTITLKNKTVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITENDSLMKAQS 97
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEYSEG 191
WV EL+ ++ N+VI L GNK DL S+R V +
Sbjct: 98 WVDELK--------------------SKVGDENLVICLVGNKIDLCDEDESKRVVLTKDA 137
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV 229
+ YA+E L+F E SAK+ NV E+F I +KL + ++
Sbjct: 138 KDYADEQNLMFYEVSAKSGENVKEVFQVIGEKLYEDKI 175
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVNRFVKDSFDELRESTIGA 38
>gi|2500069|sp|Q13636.1|RAB31_HUMAN RecName: Full=Ras-related protein Rab-31; AltName: Full=Ras-related
protein Rab-22B
gi|10179679|gb|AAG13847.1|AF234995_1 small GTPase RAB22B [Homo sapiens]
gi|20379090|gb|AAM21105.1|AF498957_1 small GTP binding protein RAB31 [Homo sapiens]
gi|1388195|gb|AAB02832.1| low-Mr GTP-binding protein Rab31 [Homo sapiens]
gi|47115255|emb|CAG28587.1| RAB31 [Homo sapiens]
gi|54696916|gb|AAV38830.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|54696918|gb|AAV38831.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|60818832|gb|AAX36478.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61356180|gb|AAX41217.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61356190|gb|AAX41218.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61363035|gb|AAX42323.1| RAB31 member RAS oncogene family [synthetic construct]
gi|189054712|dbj|BAG37334.1| unnamed protein product [Homo sapiens]
Length = 194
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 102/179 (56%), Gaps = 23/179 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 38 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK 97
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 98 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 135
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
YAE G + +ETSAK A+N+ E+F I++++P + + NG G VE + CC
Sbjct: 136 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPTMQASRRCC 194
>gi|395857349|ref|XP_003801059.1| PREDICTED: ras-related protein Rab-31 [Otolemur garnettii]
Length = 207
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 102/177 (57%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 53 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKW 112
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL R V + + YA
Sbjct: 113 V---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKEYA 150
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
E G L +ETSAK A+N+ E+F I++++P + + NG G + A + CC
Sbjct: 151 ESIGALVVETSAKNAINIEELFQGISRRIPPLDPHENGNSGAIKLGKAGTQASRRCC 207
>gi|330791941|ref|XP_003284049.1| Rab GTPase [Dictyostelium purpureum]
gi|325085978|gb|EGC39375.1| Rab GTPase [Dictyostelium purpureum]
Length = 209
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 99/169 (58%), Gaps = 26/169 (15%)
Query: 59 CMTQIVINVVFYP--YLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQA 116
C++ ++ F P AAF+ +++ +D++ I+ EIWDTAGQERY +L PMYYR A A
Sbjct: 59 CISSRLVRNEFGPTDSTIGAAFLVKSMVVDNINIKLEIWDTAGQERYRSLTPMYYRGAAA 118
Query: 117 AIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNK 176
A++VYDIT ++TF K WV E LQ+ A PN+++ALAGNK
Sbjct: 119 AVVVYDITKKNTFETLKRWVSE---------------------LQKHASPNLILALAGNK 157
Query: 177 ADLPTSRRCVEYSEGEAYAEENG-LLFMETSAKTAMNVNEIFVEIAKKL 224
DLP R V E Y E G +F ETSA + N+NE+F+EI ++L
Sbjct: 158 VDLPN--REVPVDEVNRYISELGNAIFFETSAASGQNINELFIEICRRL 204
>gi|397475954|ref|XP_003809378.1| PREDICTED: ras-related protein Rab-31 [Pan paniscus]
Length = 191
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 102/177 (57%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 37 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKW 96
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL R V + + YA
Sbjct: 97 V---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKEYA 134
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
E G + +ETSAK A+N+ E+F I++++P + + NG G VE + CC
Sbjct: 135 ESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPTMQASRRCC 191
>gi|395536593|ref|XP_003770297.1| PREDICTED: ras-related protein Rab-17 [Sarcophilus harrisii]
Length = 385
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 94/156 (60%), Gaps = 21/156 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF TQ + +D+ ++ EIWDTAGQE+YH++ +Y+R A AAI+VYDI N+D+F RA++W
Sbjct: 226 AFFTQMMEIDNSALKLEIWDTAGQEKYHSVCHLYFRGANAAILVYDIANKDSFQRAQNWW 285
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
KEL+ +P IV+ L GNK DL SR V EG+A+AE
Sbjct: 286 KELE--------------------NEFSPDEIVVILVGNKTDLEDSRE-VTLEEGKAFAE 324
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG 232
LLFMETSAK V E F +A++L K+E NG
Sbjct: 325 SKKLLFMETSAKLNYQVTEAFTALARELLKREEQNG 360
>gi|432098875|gb|ELK28370.1| Ras-related protein Rab-5C [Myotis davidii]
Length = 184
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 65/72 (90%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR QAAI+VYDITN DTF RA++W
Sbjct: 56 AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGVQAAIMVYDITNTDTFARAENW 115
Query: 136 VKELQRMAPPNI 147
VKELQR A PNI
Sbjct: 116 VKELQRQASPNI 127
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 13/104 (12%)
Query: 279 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGE---- 333
G+GG RPN KICQ+KLVLLGESAVGKSSLVL FV+GQFHEYQESTIG
Sbjct: 3 GQGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLHFVKGQFHEYQESTIGAAFLTQ 61
Query: 334 --CQSSHSISFSM---PTKNRLNNNVPITF--VWVIMMIFGCGN 370
C ++ F + + R ++ P+ + V +M++ N
Sbjct: 62 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGVQAAIMVYDITN 105
>gi|346473575|gb|AEO36632.1| hypothetical protein [Amblyomma maculatum]
Length = 194
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 90/150 (60%), Gaps = 22/150 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+ + + L D T +F IWDTAGQERY LAPMYYR A AA+IVYDIT+ D+F +SW
Sbjct: 44 ASFMMKNLVLHDRTFKFNIWDTAGQERYRALAPMYYRGAAAAVIVYDITSMDSFNAVQSW 103
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+ELQ NI + +AGNK DL R V + GE+YA
Sbjct: 104 ---------------------VRELQLHGEQNIALGIAGNKCDLEDHRE-VSLATGESYA 141
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
++G +F+ETSA A N+ E+F+ IA K+P
Sbjct: 142 HQHGAVFVETSALKATNIQELFMGIAMKVP 171
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 288 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
N T+ K+C LLG+S VGKSS++ RFV F+ ESTIG
Sbjct: 5 NTTTEVKVC-----LLGDSGVGKSSILQRFVYNTFNSSAESTIGA 44
>gi|396493770|ref|XP_003844142.1| hypothetical protein LEMA_P017930.1 [Leptosphaeria maculans JN3]
gi|312220722|emb|CBY00663.1| hypothetical protein LEMA_P017930.1 [Leptosphaeria maculans JN3]
Length = 387
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 95/186 (51%), Gaps = 48/186 (25%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT + +A+ W
Sbjct: 192 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPSSLTKAQHW 251
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS------------- 182
V EL R A P IVIAL GNK+DL T+
Sbjct: 252 V---------------------AELHRQASPGIVIALVGNKSDLATAAGEESSEDADAAP 290
Query: 183 --------------RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
R V + YA+E LLF ETSAKT NV E+F IA +P+
Sbjct: 291 AAEGEEEAAEDGADARRVPAKTAKTYADEESLLFFETSAKTGQNVAEVFTAIANAIPETS 350
Query: 229 VNNGQG 234
+ +G
Sbjct: 351 LKGPRG 356
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLV+RFV F E +E TIG
Sbjct: 159 KLVLLGEAAVGKSSLVMRFVNNDFQENKEPTIGA 192
>gi|327281988|ref|XP_003225727.1| PREDICTED: ras-related protein Rab-31-like [Anolis carolinensis]
Length = 196
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 101/179 (56%), Gaps = 23/179 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 40 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 99
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 100 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPTKDAKE 137
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
YAE G + +ETSAK A+N+ E+F I++++P E + NG G + T CC
Sbjct: 138 YAETIGAIVVETSAKNAINIEELFQGISRQIPPLETHENGNSGTIKLGKQTTQMTRRCC 196
>gi|238577909|ref|XP_002388536.1| hypothetical protein MPER_12432 [Moniliophthora perniciosa FA553]
gi|215449908|gb|EEB89466.1| hypothetical protein MPER_12432 [Moniliophthora perniciosa FA553]
Length = 243
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 99/151 (65%), Gaps = 25/151 (16%)
Query: 76 AAFITQTVCLDD-VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+TQTV LDD T++FEIWDTAGQERY APMYYRNA A++VYDIT + +A++
Sbjct: 80 AAFLTQTVTLDDGTTVKFEIWDTAGQERYK--APMYYRNANCAVVVYDITQSASLEKARN 137
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W++E LQR A P+IVIAL GNK+DL +RR V E + Y
Sbjct: 138 WIRE---------------------LQRQADPSIVIALCGNKSDL-AARRQVTEEEAKKY 175
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
AEE GL++ ETSAKT V++IF IAKKLP
Sbjct: 176 AEEEGLMWGETSAKTGEGVSDIFTAIAKKLP 206
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 27/29 (93%)
Query: 303 LGESAVGKSSLVLRFVRGQFHEYQESTIG 331
LGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 51 LGESAVGKSSLVLRFVKDQFDDYRESTIG 79
>gi|37681919|gb|AAQ97837.1| RAB22A, member RAS oncogene family [Danio rerio]
Length = 196
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 101/160 (63%), Gaps = 25/160 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT +++F K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL +R E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLSDAREVSE-KDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG 235
+ +F+ETSAK A+N+NE+F +I++++P V + +GG
Sbjct: 138 DSIHAIFIETSAKNAININEVFTQISERIP---VLDAEGG 174
>gi|60654153|gb|AAX29769.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 195
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 101/179 (56%), Gaps = 23/179 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 38 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK 97
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 98 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 135
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
YAE G + +ETSAK A+N+ E+F I++++P + + NG G VE CC
Sbjct: 136 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPTMQANRRCC 194
>gi|366990719|ref|XP_003675127.1| hypothetical protein NCAS_0B06720 [Naumovozyma castellii CBS 4309]
gi|342300991|emb|CCC68756.1| hypothetical protein NCAS_0B06720 [Naumovozyma castellii CBS 4309]
Length = 212
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 97/155 (62%), Gaps = 24/155 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V ++D T++FEIWDTAGQER+ +LAPMYYRNAQAA+IVYD+T +F +A+ W
Sbjct: 42 AAFLTQRVNINDNTVKFEIWDTAGQERFASLAPMYYRNAQAALIVYDVTKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEYSEGE 192
+KEL A +++IAL GNK D+ R V EGE
Sbjct: 102 ---------------------IKELHEQANKDMIIALVGNKVDVLENNEDERKVAREEGE 140
Query: 193 AYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
AEE GLLF ETSAKT +NV E FV I +K+P K
Sbjct: 141 KLAEEEGLLFFETSAKTGLNVTETFVAIGEKIPLK 175
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 VTSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGA 42
>gi|56118785|ref|NP_991282.2| ras-related protein Rab-22A [Danio rerio]
gi|55250250|gb|AAH85393.1| RAB22A, member RAS oncogene family [Danio rerio]
gi|182889502|gb|AAI65262.1| Rab22a protein [Danio rerio]
Length = 196
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 107/179 (59%), Gaps = 25/179 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT +++F K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKE L++ PPNIV+A+AGNK DL +R E + + YA
Sbjct: 100 VKE---------------------LRQHGPPNIVVAIAGNKCDLSDAREVSE-KDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG---QGGRRLVETAEAPKTSNCC 251
+ +F+ETSAK A+N+NE+F +I++++P + G +G + + + + + CC
Sbjct: 138 DSIHAIFIETSAKNAININEVFTQISERIPVLDAEGGSAVKGFKLRRQPSVSTRERTCC 196
>gi|354492620|ref|XP_003508445.1| PREDICTED: ras-related protein Rab-31-like [Cricetulus griseus]
Length = 203
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 102/179 (56%), Gaps = 23/179 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 47 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 106
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 107 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 144
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
YAE G + +ETSAK A+N+ E+F I++++P + + NG G + T + CC
Sbjct: 145 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGGIRLGTQSLQASRRCC 203
>gi|255726788|ref|XP_002548320.1| vacuolar protein sorting-associated protein 21 [Candida tropicalis
MYA-3404]
gi|240134244|gb|EER33799.1| vacuolar protein sorting-associated protein 21 [Candida tropicalis
MYA-3404]
Length = 205
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 102/183 (55%), Gaps = 28/183 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + D TI++EIWDTAGQER+ +LAPMYYRNAQAA++VYDIT +F RA+ W
Sbjct: 45 AAFLTQKCTVGDRTIKYEIWDTAGQERFASLAPMYYRNAQAAVVVYDITKPSSFIRARHW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
+KEL+ +P IVIAL GNK DL R+ E A
Sbjct: 105 ---------------------IKELKDQSPEGIVIALVGNKLDLEDERKVEASEV-EEEA 142
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLP----KKEVNNGQGGRRLVETAEAPKTSN-- 249
GL+F +TSAKT V E+F I K + + +N G R+ AEAP +N
Sbjct: 143 NSQGLMFFQTSAKTGEGVLEVFEGIGKNIKIGDTSQATSNNNGINRIDLNAEAPANTNTG 202
Query: 250 CCN 252
CC+
Sbjct: 203 CCS 205
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 28/33 (84%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV +F E +E TIG
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVSNEFQENKEPTIG 44
>gi|367012904|ref|XP_003680952.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
gi|359748612|emb|CCE91741.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
Length = 217
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 96/167 (57%), Gaps = 31/167 (18%)
Query: 69 FYPYLFSAAFITQTVCL------DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYD 122
F AAF++QT+ + ++ I+FEIWDTAGQERY +LAPMYYRNA AA++VYD
Sbjct: 31 FRESTIGAAFLSQTIKVKESDDGEETVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYD 90
Query: 123 ITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL--- 179
+T QD+ +A+SWV EL+ ++ ++VI L GNK DL
Sbjct: 91 VTQQDSLVKAQSWVNELKN--------------------KVGDDDLVICLVGNKVDLCDE 130
Query: 180 --PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
++R V E +YA E LLF E SAKT +NV +IF I +KL
Sbjct: 131 DAEDNKRAVGTEEARSYANEQNLLFYEVSAKTGLNVQQIFQSIGEKL 177
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 31/36 (86%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 3 QFKLVLLGDSSVGKSSIVYRFVKNSFDEFRESTIGA 38
>gi|432103526|gb|ELK30630.1| Ras-related protein Rab-31 [Myotis davidii]
Length = 665
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 104/175 (59%), Gaps = 27/175 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 41 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKW 100
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL + R V + + YA
Sbjct: 101 V---------------------KELKEHGPENIVMAIAGNKCDL-SDIREVPLKDAKEYA 138
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLP--KKEVNNGQGGRRLVE---TAEAP 245
E G + +ETSAK A+N+ E+F I++++P + N G +LV+ AE+P
Sbjct: 139 ESIGAIVVETSAKNAINIEELFQGISRQIPPLDPQENGNTGAIKLVKHTAPAESP 193
>gi|403414221|emb|CCM00921.1| predicted protein [Fibroporia radiculosa]
Length = 275
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 93/180 (51%), Gaps = 56/180 (31%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L+D +R+EIWDTAGQER+H+LAPMYYRNAQAA++VYD+T + +AK+W
Sbjct: 49 AAFLTQKCRLEDRVLRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDVTKASSLEKAKTW 108
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL----------PTSRRC 185
VKEL QR A PNIVIALAGNK DL P +
Sbjct: 109 VKEL---------------------QRQANPNIVIALAGNKVDLVQPSPSVSGSPATESE 147
Query: 186 VEYSEGEAYAEEN-------------------------GLLFMETSAKTAMNVNEIFVEI 220
E + A EN GLLF ETSAKT V EIF EI
Sbjct: 148 DEADDATATPGENAGAASEPESLRQVPREEAEAYAQEAGLLFFETSAKTGEGVVEIFTEI 207
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 14 QVKLVLLGEAAVGKSSVVLRFVSNEFQANKEPTIGA 49
>gi|6010035|emb|CAB57221.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 126
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 91/148 (61%), Gaps = 23/148 (15%)
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
APMYYR A AAIIVYDIT+ D+F RAK WV+ELQ+
Sbjct: 1 FAPMYYRGAAAAIIVYDITS---------------------ADSFTRAKKWVQELQKQGN 39
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
PN+V+ALAGNKADL R+ V E YAEENGL FMETSAKTA +VN++F EIAK+LP
Sbjct: 40 PNMVMALAGNKADLEDKRK-VTAEEARVYAEENGLFFMETSAKTAADVNDVFHEIAKRLP 98
Query: 226 KKEVNNGQGGRRLVE-TAEAPKTSNCCN 252
+ + G LV+ AE + ++CC+
Sbjct: 99 RAQPTQNPAGMVLVDRPAEGARAASCCS 126
>gi|73535725|pdb|1YVD|A Chain A, Gppnhp-Bound Rab22 Gtpase
Length = 169
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 97/150 (64%), Gaps = 22/150 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 40 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+ EL++ PP+IV+A+AGNK DL R +E + + YA
Sbjct: 100 VR---------------------ELRQHGPPSIVVAIAGNKCDLTDVREVME-RDAKDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
+ +F+ETSAK A+N+NE+F+EI++++P
Sbjct: 138 DSIHAIFVETSAKNAININELFIEISRRIP 167
>gi|425768728|gb|EKV07245.1| hypothetical protein PDIP_74870 [Penicillium digitatum Pd1]
gi|425770218|gb|EKV08691.1| hypothetical protein PDIG_65550 [Penicillium digitatum PHI26]
Length = 261
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 93/189 (49%), Gaps = 59/189 (31%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T
Sbjct: 50 AAFLTQKCSLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTK---------- 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS------------- 182
P+ + +AK WV ELQR A P IVIAL GNK DL
Sbjct: 100 ---------PS--SLTKAKHWVAELQRQASPGIVIALVGNKLDLTNDGGDVSEAAGAAQS 148
Query: 183 -------------------------RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIF 217
R V E YAEE GLLF ETSAKT NV ++F
Sbjct: 149 ESESVQDGGEGANEQDEVQDAVSGDARKVSTREATGYAEEEGLLFFETSAKTGTNVVDVF 208
Query: 218 VEIAKKLPK 226
IA +P+
Sbjct: 209 TAIANAIPE 217
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 49
>gi|82794111|ref|XP_728308.1| Rab5c GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23484593|gb|EAA19873.1| Rab5c GTPase-related [Plasmodium yoelii yoelii]
Length = 182
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 96/163 (58%), Gaps = 24/163 (14%)
Query: 69 FYPY---LFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
FY Y AAF+TQ + + + TI+FEIWDTAGQERY +LAPMYYR A AA+IVYDITN
Sbjct: 30 FYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQERYRSLAPMYYRGAAAAVIVYDITN 89
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F AK W+ EL+ + +IVI A +
Sbjct: 90 KKSFEGAK---------------------GWIHELKSVHSNDIVIGYIHTCACIRVCAYI 128
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
+S E++A N +LF+ETSAKT NVN++F++IAKKLP+ +
Sbjct: 129 FSFSLAESFANSNNILFIETSAKTGTNVNDLFLKIAKKLPRNK 171
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 25/29 (86%)
Query: 304 GESAVGKSSLVLRFVRGQFHEYQESTIGG 332
G+++VGKS +V+RF + +F+EYQESTIG
Sbjct: 12 GDTSVGKSCIVVRFAKNEFYEYQESTIGA 40
>gi|313226482|emb|CBY21627.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 104/178 (58%), Gaps = 24/178 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+T+T+ ++ IR +IWDTAG ERY +LAPMYYR+A A++VYD+T +D++ RA+ W
Sbjct: 61 AAFLTKTLDFEETRIRLDIWDTAGAERYASLAPMYYRHASGALVVYDVTKRDSYVRAEKW 120
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
++EL+ AP +I++ L GNK DL +R V EG A
Sbjct: 121 ---------------------IRELKEKAPKDIIVYLVGNKIDL-VEQRAVSTEEGMELA 158
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPK--TSNCC 251
E L F+ETSAK NV ++F+E A+K+ ++VN ++ P+ +SNCC
Sbjct: 159 EVFELEFIETSAKENKNVAQVFMEFAQKIADEKVNQDLTEATVIPVDNPPRNTSSNCC 216
>gi|45184648|ref|NP_982366.1| AAL176Cp [Ashbya gossypii ATCC 10895]
gi|44979994|gb|AAS50190.1| AAL176Cp [Ashbya gossypii ATCC 10895]
gi|374105564|gb|AEY94475.1| FAAL176Cp [Ashbya gossypii FDAG1]
Length = 205
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 95/162 (58%), Gaps = 26/162 (16%)
Query: 69 FYPYLFSAAFITQTVCL---DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F AAF+++T+ L DD I+FEIWDTAGQERY +LAPMYYRNA AA++VYD+T
Sbjct: 31 FRESTIGAAFLSRTIKLADHDDAMIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDVTQ 90
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR-- 183
+D+ +A+SWV EL+ ++ ++VI L GNK DL
Sbjct: 91 EDSLAKAQSWVNELK--------------------SKVGDEDLVIFLVGNKLDLVDEDCK 130
Query: 184 -RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
R ++ E +AYAE +GL+F E SAKT + ++F I KL
Sbjct: 131 PRVIDSEEAQAYAEAHGLMFHEVSAKTGTGILDVFQGIGGKL 172
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGA 38
>gi|62900806|sp|Q6GQP4.2|RAB31_RAT RecName: Full=Ras-related protein Rab-31; AltName: Full=GTP-binding
protein Rab0
Length = 194
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 97/167 (58%), Gaps = 24/167 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 38 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 97
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 98 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 135
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLP--KKEVNNGQGGRRL 238
YAE G L +ETSAK A+N+ E+F I++++P N GG +L
Sbjct: 136 YAESIGALVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGGIKL 182
>gi|431896339|gb|ELK05755.1| Ras-related protein Rab-31 [Pteropus alecto]
Length = 215
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 61 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKW 120
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL R V + + YA
Sbjct: 121 V---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKEYA 158
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
E G + +ETSAK A+N+ E+F I++++P + + NG G + + CC
Sbjct: 159 ESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGAMKLGKQATQASRRCC 215
>gi|255942281|ref|XP_002561909.1| Pc18g00620 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586642|emb|CAP94286.1| Pc18g00620 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 261
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 92/192 (47%), Gaps = 59/192 (30%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 50 AAFLTQKCSLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPSSLTKAKHW 109
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT-------------- 181
V E LQR A P IVIAL GNK DL
Sbjct: 110 VAE---------------------LQRQASPGIVIALVGNKLDLTNDGGDVSEAAGAAQD 148
Query: 182 ------------------------SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIF 217
R V E YAEE GLLF ETSAKT NV ++F
Sbjct: 149 ESESAQNGEEGAGEEDEVQDAVSGDARKVSTREATGYAEEEGLLFFETSAKTGTNVVDVF 208
Query: 218 VEIAKKLPKKEV 229
IA +P+ +
Sbjct: 209 TAIANAIPESSL 220
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|77404176|ref|NP_659562.2| ras-related protein Rab-31 [Rattus norvegicus]
gi|49119014|gb|AAH72698.1| RAB31, member RAS oncogene family [Rattus norvegicus]
Length = 195
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 97/167 (58%), Gaps = 24/167 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 99 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLP--KKEVNNGQGGRRL 238
YAE G L +ETSAK A+N+ E+F I++++P N GG +L
Sbjct: 137 YAESIGALVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGGIKL 183
>gi|451998021|gb|EMD90486.1| hypothetical protein COCHEDRAFT_1139945 [Cochliobolus
heterostrophus C5]
Length = 243
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 92/178 (51%), Gaps = 48/178 (26%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT + +A+ W
Sbjct: 48 AAFLTQKCNLPSRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPSSLTKAQHW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS------------- 182
V EL R A P IVIAL GNK DL T+
Sbjct: 108 V---------------------AELHRQASPGIVIALVGNKFDLATAGDEDRPEDADAAP 146
Query: 183 --------------RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
R V +AYA+E LLF ETSAKT NV E+F IA +P+
Sbjct: 147 AAEGEEEQAQDDQDSRRVPSKTAKAYADEESLLFFETSAKTGHNVAEVFTAIANAIPE 204
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLV+RFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVMRFVNNDFQENKEPTIGA 48
>gi|403265333|ref|XP_003924897.1| PREDICTED: ras-related protein Rab-31 [Saimiri boliviensis
boliviensis]
Length = 191
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 121/223 (54%), Gaps = 37/223 (16%)
Query: 32 KGNWFSMMSGKRQSDCMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVTIR 91
+G W ++ +G +S + + +++D D I A+F+T+TV + +
Sbjct: 3 QGTWLTLDTGVGKSSIVCR-FVQDHFDHNISPTI---------GASFMTKTVPCGNELHK 52
Query: 92 FEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFG 151
F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K WV
Sbjct: 53 FLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWV--------------- 97
Query: 152 RAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAM 211
KEL+ P NIV+A+AGNK DL R V + + YAE G + +ETSAK A+
Sbjct: 98 ------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKEYAESIGAIVVETSAKNAI 150
Query: 212 NVNEIFVEIAKKLP--KKEVNNGQGGRRLVE-TAEAPKTSNCC 251
N+ E+F I++++P N G +LV+ T +A + CC
Sbjct: 151 NIEELFQGISRQIPPLDPHENGNNGAIKLVKPTTQASR--RCC 191
>gi|317737971|ref|NP_001188086.1| ras-related protein rab-22a [Ictalurus punctatus]
gi|308323839|gb|ADO29055.1| ras-related protein rab-22a [Ictalurus punctatus]
Length = 197
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 24/178 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+ LAPMYYR + AAIIVYDIT +++F K+W
Sbjct: 42 ASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEESFLTLKNW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL + P NIV+A+AG+K D+ +R +E + + YA
Sbjct: 102 V---------------------KELHQHGPSNIVVAIAGDKCDVSDAREVLE-KDAKDYA 139
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-VNNGQGGRRL-VETAEAPKTSNCC 251
+ +F+ETSAK A+N+NEIF EI++K+P E G G +L E ++ + CC
Sbjct: 140 DSIHAIFVETSAKNAININEIFTEISQKIPLLERSETGVRGLKLRREQSDLTRERTCC 197
>gi|451845469|gb|EMD58781.1| hypothetical protein COCSADRAFT_128298 [Cochliobolus sativus
ND90Pr]
Length = 243
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 92/178 (51%), Gaps = 48/178 (26%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT + +A+ W
Sbjct: 48 AAFLTQKCNLPSRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPSSLTKAQHW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS------------- 182
V EL R A P IVIAL GNK DL T+
Sbjct: 108 V---------------------AELHRQASPGIVIALVGNKFDLATAGDEDRPEDTDAAP 146
Query: 183 --------------RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
R V +AYA+E LLF ETSAKT NV E+F IA +P+
Sbjct: 147 AAEGEEEQAQDDQDSRRVPSKAAKAYADEESLLFFETSAKTGHNVAEVFTAIANAIPE 204
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLV+RFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVMRFVNNDFQENKEPTIGA 48
>gi|440901603|gb|ELR52512.1| Ras-related protein Rab-31, partial [Bos grunniens mutus]
Length = 197
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 102/177 (57%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 43 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKW 102
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL R V + + YA
Sbjct: 103 V---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKEYA 140
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
E G + +ETSAK A+N+ E+F I++++P + + NG G + + + CC
Sbjct: 141 ESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGSIKLGKPTSQVSRRCC 197
>gi|444722883|gb|ELW63557.1| Ras-related protein Rab-17 [Tupaia chinensis]
Length = 207
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 100/175 (57%), Gaps = 23/175 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V L +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDLGSSSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFHKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
+L++ + P +V+ L GNK DL R V + EG+ +AE
Sbjct: 114 ADLEK--------------------ELCPGEVVVMLVGNKTDLDQERE-VTFQEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
LLFME SAK V+E+F +A +L ++EV GQ R T+ + + CC
Sbjct: 153 SKRLLFMEASAKLDFQVSELFTAVAGELLRREVQEGQSQR--APTSSPTRPAQCC 205
>gi|7689359|gb|AAF67746.1|AF254800_1 GTP-binding protein Rab0 [Rattus norvegicus]
Length = 194
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 97/167 (58%), Gaps = 24/167 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 38 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 97
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 98 KWV---------------------KELKEYGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 135
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLP--KKEVNNGQGGRRL 238
YAE G L +ETSAK A+N+ E+F I++++P N GG +L
Sbjct: 136 YAESIGALVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGGIKL 182
>gi|440290249|gb|ELP83675.1| rab5, putative [Entamoeba invadens IP1]
Length = 194
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 96/160 (60%), Gaps = 23/160 (14%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+T+T+ +D TI+FE WDTAGQERYH+L PMYYR + AA++V+DIT+ +
Sbjct: 36 FQENTIGAAFLTKTLIVDKDTIKFECWDTAGQERYHSLTPMYYRGSNAALVVFDITSDSS 95
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
+ +AK WV EL R + + +I L GNK DL SR V
Sbjct: 96 YAQAKKWVDEL----------------------RESANDTMIFLVGNKCDLEGSRS-VTK 132
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
+ EAYA + ++ETSAK+ +NV+E+F +A+KLPK E
Sbjct: 133 EDAEAYARSISVDYIETSAKSNINVSELFDLVARKLPKTE 172
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
T+ Q+K+VLLG+S+VGKSS+VLR +G++ E+QE+TIG
Sbjct: 2 TEGNTYQFKIVLLGDSSVGKSSIVLRVCKGEYKEFQENTIGA 43
>gi|334325908|ref|XP_001370672.2| PREDICTED: ras-related protein Rab-31-like [Monodelphis domestica]
Length = 221
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 102/179 (56%), Gaps = 23/179 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 65 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFNTLK 124
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 125 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPMKDAKE 162
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTS-NCC 251
YAE G + +ETSAK A+N+ E+F I++++P + + + + P+TS CC
Sbjct: 163 YAESIGAVVVETSAKCAINIEELFQGISRQIPPLDPHENGNNGAIKLGKQPPQTSRRCC 221
>gi|338728025|ref|XP_001489577.2| PREDICTED: ras-related protein Rab-31-like [Equus caballus]
Length = 195
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 104/182 (57%), Gaps = 29/182 (15%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 99 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLP--KKEVNNGQGGRRLVE--TAEAPKTSN 249
YAE G + +ETSAK A+N+ E+F I++++P N GG +L++ T P+
Sbjct: 137 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGGIKLMKPSTQAGPR--- 193
Query: 250 CC 251
CC
Sbjct: 194 CC 195
>gi|281351176|gb|EFB26760.1| hypothetical protein PANDA_015877 [Ailuropoda melanoleuca]
Length = 212
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 101/181 (55%), Gaps = 29/181 (16%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V L V+++FEIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDLGAVSLKFEIWDTAGQEKYHSICHLYFRGANAAVLVYDITRKDSFFKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+R +PP +V+ L GNK DL R V + EG+ +AE
Sbjct: 114 KDLERESPPG--------------------EVVVMLVGNKTDLGEQRE-VTFQEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE------VNNGQGGRRLVETAEAPKTSNC 250
LLFME SAK VNE+F +A +L ++E G G L P + C
Sbjct: 153 SKRLLFMEASAKLNQQVNEVFSTVAWELLRREERKEGRPQRGDAGLALSGAPAGP--ARC 210
Query: 251 C 251
C
Sbjct: 211 C 211
>gi|301781670|ref|XP_002926253.1| PREDICTED: ras-related protein Rab-17-like [Ailuropoda melanoleuca]
Length = 213
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 101/181 (55%), Gaps = 29/181 (16%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V L V+++FEIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDLGAVSLKFEIWDTAGQEKYHSICHLYFRGANAAVLVYDITRKDSFFKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+R +PP +V+ L GNK DL R V + EG+ +AE
Sbjct: 114 KDLERESPPG--------------------EVVVMLVGNKTDLGEQRE-VTFQEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE------VNNGQGGRRLVETAEAPKTSNC 250
LLFME SAK VNE+F +A +L ++E G G L P + C
Sbjct: 153 SKRLLFMEASAKLNQQVNEVFSTVAWELLRREERKEGRPQRGDAGLALSGAPAGP--ARC 210
Query: 251 C 251
C
Sbjct: 211 C 211
>gi|50411080|ref|XP_457015.1| DEHA2B01144p [Debaryomyces hansenii CBS767]
gi|49652680|emb|CAG85000.1| DEHA2B01144p [Debaryomyces hansenii CBS767]
Length = 224
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 101/167 (60%), Gaps = 27/167 (16%)
Query: 76 AAFITQTVCL--DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ++ L ++ T++FEIWDTAGQERY +LAPMYYRNA AA+ VYDIT++ +F +A+
Sbjct: 51 AAFLTQSITLPENNTTVKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFTKAQ 110
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR----RCVEYS 189
W+K EL++ AP IVI L GNKADL +R R V
Sbjct: 111 DWIK---------------------ELKKQAPEGIVICLVGNKADLEENREVDEREVSQY 149
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR 236
E E+N ++ E SAK+ V +IF ++A+ LP +EV +G R
Sbjct: 150 IDELNQEDNKMVAAECSAKSGDGVVDIFTKVARALPVEEVISGSSNR 196
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 9/68 (13%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNN 353
+ Q+KLVLLGESAVGKSS+V RFV+ F +ESTIG + S ++P NN
Sbjct: 13 RFAQFKLVLLGESAVGKSSIVHRFVKNTFDNMRESTIGAAFLTQ---SITLP-----ENN 64
Query: 354 VPITF-VW 360
+ F +W
Sbjct: 65 TTVKFEIW 72
>gi|390473801|ref|XP_002757097.2| PREDICTED: ras-related protein Rab-31-like [Callithrix jacchus]
Length = 200
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 104/179 (58%), Gaps = 27/179 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 46 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKW 105
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL R V + + YA
Sbjct: 106 V---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKEYA 143
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLP--KKEVNNGQGGRRLV-ETAEAPKTSNCC 251
E G + +ETSAK A+N+ E+F I++++P N G +LV +T +A + CC
Sbjct: 144 ESIGAIVVETSAKNAINIEELFQGISRQIPPLDHHENGNNGAIKLVKQTTQASR--RCC 200
>gi|241950447|ref|XP_002417946.1| RAB family GTPase, putative [Candida dubliniensis CD36]
gi|223641284|emb|CAX45664.1| RAB family GTPase, putative [Candida dubliniensis CD36]
Length = 221
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 102/169 (60%), Gaps = 29/169 (17%)
Query: 76 AAFITQTVCL--DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQT+ + + TI+FEIWDTAGQERY +LAPMYYRNA AA+ VYDIT++ +F +A+
Sbjct: 47 AAFLTQTITIPESETTIKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFQKAQ 106
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
W+K EL+R AP IVIAL GNK+DL R VE SE +
Sbjct: 107 DWIK---------------------ELKRQAPEGIVIALVGNKSDLDDERE-VESSEVQE 144
Query: 194 YA-EENG----LLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRR 237
Y E+NG ++ E SAK+ V ++F +I + LP EV + R+
Sbjct: 145 YVQEQNGDCCSIITAECSAKSGDGVLDVFNKIGRALPVDEVIDASRSRQ 193
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 288 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
N Q+ + Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 3 NKQSNQRFAQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGA 47
>gi|363754611|ref|XP_003647521.1| hypothetical protein Ecym_6328 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891158|gb|AET40704.1| hypothetical protein Ecym_6328 [Eremothecium cymbalariae
DBVPG#7215]
Length = 205
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 97/162 (59%), Gaps = 26/162 (16%)
Query: 69 FYPYLFSAAFITQTVCL---DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F AAF+++T+ L DD I+FEIWDTAGQERY +LAPMYYRNA AA++VYD+T
Sbjct: 31 FRESTIGAAFLSRTIKLAEYDDTMIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDVTQ 90
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLP---TS 182
+D+ +A+SWV EL+ ++ ++VI L GNK DL +
Sbjct: 91 EDSLAKAQSWVNELK--------------------SKVGDDDLVICLVGNKVDLAEEDSK 130
Query: 183 RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
+ ++ + + YAE++GL+F E SAK+ V E+F I ++L
Sbjct: 131 SKVIDEDDAKDYAEQHGLIFHEVSAKSGRGVIEVFQNIGERL 172
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGA 38
>gi|403291443|ref|XP_003936799.1| PREDICTED: ras-related protein Rab-17 [Saimiri boliviensis
boliviensis]
Length = 212
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 106/178 (59%), Gaps = 24/178 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V L D +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDLGDSSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFHKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+R ELQ P +++ L GNK DL + R V + EG+ +A+
Sbjct: 114 KDLER-----------------ELQ---PGEVLVMLVGNKTDL-SEEREVAFEEGKEFAD 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETA--EAP-KTSNCC 251
LLFMETSAK V E+F +A++L +K+ GQ R A E P + + CC
Sbjct: 153 SQKLLFMETSAKLNHQVLEVFSAVARELLQKDNGVGQAPRGDAGVALNERPVRQAKCC 210
>gi|291232375|ref|XP_002736136.1| PREDICTED: RAS-related protein RAB-22A-like [Saccoglossus
kowalevskii]
Length = 178
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 92/145 (63%), Gaps = 22/145 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+++T+ +DD + +F+IWDTAGQE+Y LAPMYYR A AAIIVYDIT + +F K W
Sbjct: 40 ASFMSKTLVVDDQSYKFQIWDTAGQEKYRGLAPMYYRGAAAAIIVYDITRESSFSAVKMW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+EL++ P ++V+A+AGNKADL +R V Y E YA
Sbjct: 100 ---------------------VRELEQYGPGDVVLAIAGNKADL-VDQREVTYDEAHKYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEI 220
++ F+ETSAKTA+NV ++F I
Sbjct: 138 DQINATFVETSAKTAVNVTQLFTAI 162
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS 336
KL LLG+S VGKSSLV RFV F+ + + TIG S
Sbjct: 7 KLCLLGDSGVGKSSLVQRFVSDTFNTHSQPTIGASFMS 44
>gi|225579124|ref|NP_598446.2| ras-related protein Rab-31 [Mus musculus]
gi|74140181|dbj|BAE33804.1| unnamed protein product [Mus musculus]
gi|74186712|dbj|BAE34811.1| unnamed protein product [Mus musculus]
gi|112293003|dbj|BAF02879.1| Rab22B [Mus musculus]
Length = 195
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 98/167 (58%), Gaps = 24/167 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 99 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK--KEVNNGQGGRRL 238
YAE G + +ETSAK A+N+ E+F I++++P + N GG +L
Sbjct: 137 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLGPQENGNSGGIKL 183
>gi|410977346|ref|XP_003995067.1| PREDICTED: ras-related protein Rab-31 [Felis catus]
Length = 217
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 63 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKW 122
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL R V + + YA
Sbjct: 123 V---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKEYA 160
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
E G + +ETSAK A+N+ E+F I++++P + + NG G + + CC
Sbjct: 161 ESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGAIKLGKPATQASRRCC 217
>gi|348521996|ref|XP_003448512.1| PREDICTED: ras-related protein Rab-31-like [Oreochromis niloticus]
Length = 194
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 101/177 (57%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT D+F K W
Sbjct: 40 ASFLTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL+ P +IV+A+AGNK DL R V E + +A
Sbjct: 100 ---------------------VKELKEHGPEDIVVAIAGNKNDLGDIRE-VPMKEAKEFA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAE-APKTSNCC 251
E +F+ETSA+ A+NV E+F +I+K++P E + T + AP T CC
Sbjct: 138 ESIAAIFIETSARNAVNVEELFQKISKQIPPLENSEVDSNDSFKLTRQPAPSTRRCC 194
>gi|62901101|sp|Q921E2.1|RAB31_MOUSE RecName: Full=Ras-related protein Rab-31
gi|15341792|gb|AAH13063.1| RAB31, member RAS oncogene family [Mus musculus]
Length = 194
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 98/167 (58%), Gaps = 24/167 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 38 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 97
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 98 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 135
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK--KEVNNGQGGRRL 238
YAE G + +ETSAK A+N+ E+F I++++P + N GG +L
Sbjct: 136 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLGPQENGNSGGIKL 182
>gi|50291301|ref|XP_448083.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527394|emb|CAG61034.1| unnamed protein product [Candida glabrata]
Length = 208
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 98/157 (62%), Gaps = 23/157 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ V +++ T++FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T +F +A+ W
Sbjct: 42 AAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHW 101
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT--SRRCVEYSEGEA 193
VKELQ A +I+IAL GNK D+ + R V E E
Sbjct: 102 ---------------------VKELQEQASKDIIIALVGNKIDVLENGTERSVSREEAEK 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN 230
AEE LLF ETSAK+ N+ ++F+ I +K+P K N
Sbjct: 141 LAEEENLLFFETSAKSGENITDVFLAIGEKVPLKTAN 177
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 28/38 (73%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
I KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 ITSLKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGA 42
>gi|401837860|gb|EJT41716.1| YPT53-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 220
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 94/155 (60%), Gaps = 26/155 (16%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+T+ + DD I+FEIWDTAGQER+ LAPMYYRNAQAA++V+DITN+ +F +A+ W
Sbjct: 47 AAFLTKRITRDDKAIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDITNEQSFRKAQDW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT-----SRRCVEYSE 190
V+EL + G NI+IAL GNK DL T S R V E
Sbjct: 107 VEELH-------EKLG--------------DNIIIALVGNKMDLLTMQGEISNRAVNEDE 145
Query: 191 GEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
+ ++ LL+ E SAKT N++E+F + +K+P
Sbjct: 146 IQNLCQQENLLYFEVSAKTGKNIHEVFQAVGEKIP 180
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGESAVGKSS+VLRF+ F E +E TIG
Sbjct: 14 KLVLLGESAVGKSSIVLRFISNDFTESREPTIGA 47
>gi|426254027|ref|XP_004020688.1| PREDICTED: ras-related protein Rab-31 [Ovis aries]
Length = 252
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 105/181 (58%), Gaps = 27/181 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 96 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 155
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 156 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 193
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLP--KKEVNNGQGGRRLVE-TAEAPKTSNC 250
YAE G + +ETSAK A+N+ E+F I++++P N G +LV+ T++A + C
Sbjct: 194 YAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGSIKLVKPTSQAGR--RC 251
Query: 251 C 251
C
Sbjct: 252 C 252
>gi|342319556|gb|EGU11504.1| GTP-binding protein RAB5 [Rhodotorula glutinis ATCC 204091]
Length = 211
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTV + IWDTAGQERY +LAPMYYR+A AA++ +DIT+ +F +A+SW
Sbjct: 50 AAFLTQTVPVKSGNF---IWDTAGQERYKSLAPMYYRSAHAAVVAFDITSSASFEKARSW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
+ E LQR A P IVI LAGNK DL S+R V ++ E +A
Sbjct: 107 IAE---------------------LQRQADPGIVIVLAGNKLDL-VSQRQVSTADAEQFA 144
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
E GLL+ E SAKTA + E+F +A+K+P
Sbjct: 145 REEGLLYFEVSAKTAEGIEEMFQTVAEKMP 174
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 31/34 (91%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGESAVGKSS+VL+FV+ QF E++ESTIG
Sbjct: 17 KLVLLGESAVGKSSIVLQFVKKQFDEWRESTIGA 50
>gi|46122247|ref|XP_385677.1| hypothetical protein FG05501.1 [Gibberella zeae PH-1]
Length = 234
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 96/177 (54%), Gaps = 40/177 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 48 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V E LQR A P IVIAL GNK DL V ++GE
Sbjct: 108 VAE---------------------LQRQASPGIVIALVGNKLDLTGDSSSVAGADGE-EG 145
Query: 196 EENG------------------LLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
+++G LLF ETSAK+ NV E+F IA +P+ + + +G
Sbjct: 146 DDSGDARKVPTEEAQAYAEEESLLFFETSAKSGHNVTEVFTAIANAIPETSLKSARG 202
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 47
>gi|332225969|ref|XP_003262160.1| PREDICTED: uncharacterized protein LOC100594346 [Nomascus
leucogenys]
Length = 411
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 101/177 (57%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 257 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKW 316
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL R V + + YA
Sbjct: 317 V---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKEYA 354
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
E G + +ETSAK A+N+ E+F I++++P + + NG G V + CC
Sbjct: 355 ESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGGIKVGQPPMQASRRCC 411
>gi|440493794|gb|ELQ76220.1| GTPase Rab5/YPT51, small G protein superfamily GTPase
[Trachipleistophora hominis]
Length = 198
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 95/176 (53%), Gaps = 24/176 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+T+T + I++EIWDTAGQERY++L PMYYR A A+I+YDIT ++F AK+W
Sbjct: 47 AAFLTKTSIYPNYNIKYEIWDTAGQERYNSLIPMYYRGAHVALIMYDITCPESFETAKNW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V EL P N V L GNK+DL + R V++ E + YA
Sbjct: 107 ---------------------VTELSSEKPKNFVKVLIGNKSDLENTSRKVDFEEAKEYA 145
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
N +LF E SAKT NV IF +++ LPK + + + V E K CC
Sbjct: 146 RRNKMLFFEASAKTGFNVENIFSSVSEMLPK---DLKEKKKHHVRIIEKKKLFFCC 198
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSI 340
YK+V+LG +VGKSSL+ ++V+ +F+ +ESTIG + SI
Sbjct: 13 YKMVVLGYYSVGKSSLIQKYVKDEFNPNEESTIGAAFLTKTSI 55
>gi|340380299|ref|XP_003388660.1| PREDICTED: ras-related protein Rab-22A-like [Amphimedon
queenslandica]
Length = 163
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 92/149 (61%), Gaps = 23/149 (15%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+++++ +D+ TI+F+IWDTAGQERY +L PMYYRNA AAI+VYDITN+ +F +
Sbjct: 38 LGASFMSKSLTVDNSTIKFQIWDTAGQERYRSLLPMYYRNAAAAIVVYDITNEGSFTVLQ 97
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
W+ EL R + PPNIV+A+AGNK DL R +
Sbjct: 98 DWIAELHR---------------------LGPPNIVLAIAGNKCDLEDKRELNKVR--LI 134
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAK 222
YA E +F ETSA TA NV E+F+EI++
Sbjct: 135 YASEVNAIFGETSALTARNVEEMFIEISE 163
>gi|410923777|ref|XP_003975358.1| PREDICTED: ras-related protein Rab-31-like [Takifugu rubripes]
Length = 194
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 100/177 (56%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT D+F K W
Sbjct: 40 ASFLTKTVPCGHELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL+ P +IV+A+AGNK DL R V E + +A
Sbjct: 100 ---------------------VKELKEHGPEDIVVAIAGNKNDLGDIRE-VPMKEAKEFA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVET-AEAPKTSNCC 251
E +F+ETSA+ A+N+ E+F +I+K++P E + T A AP T CC
Sbjct: 138 ESIAAIFIETSARNAVNIEELFQKISKQIPPLENPEVESNDSFKLTRAPAPSTRRCC 194
>gi|217075522|gb|ACJ86121.1| unknown [Medicago truncatula]
Length = 181
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 99/165 (60%), Gaps = 32/165 (19%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHT 105
C+ +++ + D +++ + A+F++QT+ L D T++FEIWDTAGQERY
Sbjct: 46 CIVLRFVRGQFDPTSKVTVG---------ASFLSQTIALRDSTTVKFEIWDTAGQERYAA 96
Query: 106 LAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAP 165
LAP+YYR A A+I YDIT+ ++F +A+ WVK ELQ+
Sbjct: 97 LAPLYYRGAAVAVIAYDITSPESFSKAQYWVK---------------------ELQKHGS 135
Query: 166 PNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTA 210
P+IV+AL GNKADL +R V +G YAE+NG+ F+ETSAKTA
Sbjct: 136 PDIVMALVGNKADL-QGKREVAVEDGMDYAEKNGMFFIETSAKTA 179
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 32/50 (64%)
Query: 282 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
GR N AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 16 GRPSPENGGGDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVG 65
>gi|348557346|ref|XP_003464480.1| PREDICTED: ras-related protein Rab-31-like [Cavia porcellus]
Length = 201
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 103/180 (57%), Gaps = 24/180 (13%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 44 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 103
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 104 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKD 141
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN-GQGGRRLVETAEAPKTSN-CC 251
YAE G + +ETSAK A+N+ E+F I++++P + + G G + + P ++ CC
Sbjct: 142 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHEKGNNGVICMHGGKPPSQAHRCC 201
>gi|255728925|ref|XP_002549388.1| GTP-binding protein ypt5 [Candida tropicalis MYA-3404]
gi|240133704|gb|EER33260.1| GTP-binding protein ypt5 [Candida tropicalis MYA-3404]
Length = 207
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 23/154 (14%)
Query: 76 AAFITQTVCLDDV--TIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ++ + + TI+FEIWDTAGQERY +LAPMYYRN+ AAI+VYDIT + RAK
Sbjct: 47 AAFLTQSITIPETQTTIKFEIWDTAGQERYKSLAPMYYRNSHAAIVVYDITKTSSLQRAK 106
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
W++EL++ + + I+IAL GNK DL R +E S+ E
Sbjct: 107 DWIEELRKNSSND--------------------GIIIALVGNKLDLQDERE-IEQSDVEE 145
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
YA E LL E SAK+ V++IF IA+KL K
Sbjct: 146 YATEQNLLSFECSAKSGEGVHDIFDAIARKLSDK 179
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 9 KFSQFKLVLLGESAVGKSSIVHRFVKNSFDDLRESTIGA 47
>gi|47223044|emb|CAG07131.1| unnamed protein product [Tetraodon nigroviridis]
Length = 194
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 101/177 (57%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT D+F K W
Sbjct: 40 ASFLTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL+ P +IV+A+AGNK DL R V E + +A
Sbjct: 100 ---------------------VKELKEHGPEDIVVAIAGNKNDLGDIRE-VPTKEAKEFA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVET-AEAPKTSNCC 251
E LF+ETSA+ A+N+ E+F +I+K++P E + T A AP + CC
Sbjct: 138 ESIAALFIETSARNAVNIEELFQKISKQIPPLENPEVESNDSFKLTRAPAPSSRRCC 194
>gi|281339724|gb|EFB15308.1| hypothetical protein PANDA_010679 [Ailuropoda melanoleuca]
Length = 185
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 31 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKW 90
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL R V + + YA
Sbjct: 91 V---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKEYA 128
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
E G + +ETSAK A+N+ E+F I++++P + + NG G + + CC
Sbjct: 129 ESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGAIKLGKQATQASRRCC 185
>gi|367004961|ref|XP_003687213.1| hypothetical protein TPHA_0I02780 [Tetrapisispora phaffii CBS 4417]
gi|357525516|emb|CCE64779.1| hypothetical protein TPHA_0I02780 [Tetrapisispora phaffii CBS 4417]
Length = 208
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 98/161 (60%), Gaps = 25/161 (15%)
Query: 69 FYPYLFSAAFITQTVCLDD--VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
F AAF++QT+ L++ I+FEIWDTAGQERY +LAPMYYRNA AA++VYD+T
Sbjct: 31 FRESTIGAAFLSQTITLEENNQVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDVTAP 90
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSR 183
D+ +AKSW++EL++ ++ +VI L GNK D+ ++
Sbjct: 91 DSLMKAKSWIEELKK--------------------KVGNEELVICLVGNKVDICEEDDTK 130
Query: 184 RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
R +E+ E + +A + LLF E SAKT NV E+F +I ++L
Sbjct: 131 RKIEFEEAKDWANDENLLFYEVSAKTGYNVKEVFQKIGEQL 171
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVYRFVKDSFDEFRESTIGA 38
>gi|395511731|ref|XP_003760106.1| PREDICTED: ras-related protein Rab-31 [Sarcophilus harrisii]
Length = 195
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 101/179 (56%), Gaps = 23/179 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFNTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 99 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPMKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
YAE G + +ETSAK A+N+ E+F I++++P + + NG G + + CC
Sbjct: 137 YAESIGAVVVETSAKCAINIEELFQGISRQIPPLDPHENGNNGAIKLGKQTPQASRRCC 195
>gi|26341846|dbj|BAC34585.1| unnamed protein product [Mus musculus]
Length = 195
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 98/167 (58%), Gaps = 24/167 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPWGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 99 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK--KEVNNGQGGRRL 238
YAE G + +ETSAK A+N+ E+F I++++P + N GG +L
Sbjct: 137 YAESIGAIVVETSAKNAINIEELFQGISRQIPPLGPQENGNSGGIKL 183
>gi|348577329|ref|XP_003474437.1| PREDICTED: ras-related protein Rab-17-like [Cavia porcellus]
Length = 212
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 111/181 (61%), Gaps = 26/181 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +V ++ EIWDTAGQE+YH++ +Y+R AQ A++VYD+T +++F RA+ W+
Sbjct: 52 AFFTKVVAVGNVALKLEIWDTAGQEKYHSVCHLYFRGAQVAMLVYDVTRKESFLRAQQWL 111
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
++L+ KELQ P IV+AL GNK DL R+ V EG+ +AE
Sbjct: 112 EDLE-----------------KELQ---PGEIVVALVGNKTDLEEKRQ-VTLQEGKEFAE 150
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV----NNGQGGRRLVETAEAP-KTSNCC 251
GLLFMETSA+ V+EIF +A++L ++++ ++ G + +AP + + CC
Sbjct: 151 SRGLLFMETSARLNHQVSEIFSAVAQELLQRDMARLGSSPLGNSGAMRLNQAPTRRTKCC 210
Query: 252 N 252
+
Sbjct: 211 S 211
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQF 322
A C KLVLLG +VGKSSLVLR+V+G F
Sbjct: 13 APSCVSKLVLLGSGSVGKSSLVLRYVKGDF 42
>gi|313242207|emb|CBY34373.1| unnamed protein product [Oikopleura dioica]
Length = 221
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 105/178 (58%), Gaps = 24/178 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+T+T+ L++ IR +IWDTAG ERY +LAPMYYR+A A++VYD+T +D++ RA+ W
Sbjct: 65 AAFLTKTLDLEETRIRLDIWDTAGAERYASLAPMYYRHASGALVVYDVTKRDSYVRAEKW 124
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
++EL+ AP +I++ L GNK DL +R V EG A
Sbjct: 125 ---------------------IRELKEKAPKDIIVYLVGNKIDL-VEQRAVSTEEGMELA 162
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPK--TSNCC 251
E L F+ETSAK NV ++F+ A+K+ ++VN+ ++ P+ +SNCC
Sbjct: 163 EVFELEFIETSAKENTNVAQVFMGFAQKIADEKVNHDLTEATVIPVDNPPQKTSSNCC 220
>gi|322709279|gb|EFZ00855.1| Rab5-like protein ypt51 [Metarhizium anisopliae ARSEF 23]
Length = 351
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 94/177 (53%), Gaps = 41/177 (23%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 166 AAFLTQKCNLPSRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 225
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V E LQR A P IVIAL GNK DL + +E
Sbjct: 226 VAE---------------------LQRQASPGIVIALVGNKLDLASD--SATGNETAEDG 262
Query: 196 EENG------------------LLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
EE+G LLF ETSAKT NV E+F IA +P+ + + +G
Sbjct: 263 EESGDARKVSTEEAKAYAEEESLLFFETSAKTGHNVTEVFTAIANAIPETSLKSARG 319
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 256 VQCKYKSSIHILTMANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVL 315
++CK S+ H + S +S + +P+ KLVLLGE+AVGKSSLVL
Sbjct: 97 IRCKLSSNQHPRRQSVSTSSKTMADSANAPKPSSSV-------KLVLLGEAAVGKSSLVL 149
Query: 316 RFVRGQFHEYQESTIG 331
RFV F E +E TIG
Sbjct: 150 RFVNNDFQENKEPTIG 165
>gi|125951222|ref|XP_697248.2| PREDICTED: ras-related protein Rab-31-like [Danio rerio]
Length = 194
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 100/177 (56%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT D+F K W
Sbjct: 40 ASFLTKTVPSGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL+ P +IV+A+AGNK DL R V E + +A
Sbjct: 100 ---------------------VKELKEHGPEDIVVAIAGNKNDLGDIRE-VPTKEAKEFA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAE-APKTSNCC 251
E +FMETSA+ A+N+ E+F +I++++P E + T + P T CC
Sbjct: 138 ESIAAIFMETSARNAVNIEELFQKISRQIPPLENTDADSHDSFKLTRQPPPATKRCC 194
>gi|401841965|gb|EJT44266.1| YPT52-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 234
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 113/218 (51%), Gaps = 62/218 (28%)
Query: 76 AAFITQTVCL--------DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQD 127
AAF++Q++ + DV I+FEIWDTAGQERY +LAPMYYRNA AA++VYDIT +D
Sbjct: 38 AAFLSQSITIHPNDGNGAKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQED 97
Query: 128 TFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL----PTSR 183
+ +A++WV EL+ ++ ++VI L GNK DL P S
Sbjct: 98 SLQKARNWVDELKN--------------------KVGDDDLVIYLLGNKVDLCQDMPGSE 137
Query: 184 RCVEYSEGE---------------AYAEENGLLFMETSAKTAMNVNEIFVEIAKKL---- 224
E +EGE YA+E GLLF E SAKT + EIF EI +KL
Sbjct: 138 TIPELNEGEDDEQKVRAISTEEAKQYAQEQGLLFREVSAKTGDGIKEIFQEIGEKLYDSK 197
Query: 225 -------PKKEVNNGQGGRRLVETAEAPKTSN---CCN 252
+++N G G+ + + P T++ CC+
Sbjct: 198 KDEILSKQNRQINGGNNGQVDIHL-QRPSTNDPTSCCS 234
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNV 354
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG S SI+ P +V
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAF-LSQSITIH-PNDGNGAKDV 58
Query: 355 PITF-VW 360
I F +W
Sbjct: 59 VIKFEIW 65
>gi|116004109|ref|NP_001070412.1| ras-related protein Rab-31 [Bos taurus]
gi|115305074|gb|AAI23832.1| RAB31, member RAS oncogene family [Bos taurus]
Length = 195
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 101/179 (56%), Gaps = 23/179 (12%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 99 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
YAE G + +ETSAK A+N+ E+F I++++P + + NG G + + CC
Sbjct: 137 YAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGSIKLGKPTSQVGRRCC 195
>gi|429966400|gb|ELA48397.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 198
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 94/176 (53%), Gaps = 24/176 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+T+T + I++EIWDTAGQERY++L PMYYR A A+IVYDIT ++F AK+W
Sbjct: 47 AAFLTKTSIYPNYNIKYEIWDTAGQERYNSLIPMYYRGAHVALIVYDITCPESFETAKNW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V EL P N V L GNK+DL + R V + E + YA
Sbjct: 107 ---------------------VTELSSEKPKNFVKVLIGNKSDLENTSRKVGFDEAKEYA 145
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
N +LF E SAKT NV +F +++ LPK + R++E K CC
Sbjct: 146 RRNKMLFFEASAKTGFNVENVFSSVSEMLPKDLKEKKKNHVRIIEKK---KLFFCC 198
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSI 340
YK+V+LG +VGKSSL+ ++V+ +F+ +ESTIG + SI
Sbjct: 13 YKMVVLGYYSVGKSSLIQKYVKDEFNPNEESTIGAAFLTKTSI 55
>gi|442751463|gb|JAA67891.1| Putative gtpase [Ixodes ricinus]
Length = 148
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 90/148 (60%), Gaps = 22/148 (14%)
Query: 79 ITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKE 138
+ + + L D T++F IWDTAGQERY LAPMYYR A AAIIVYDIT+QD+F +SW
Sbjct: 1 MMKNMVLHDRTLKFNIWDTAGQERYRALAPMYYRGAAAAIIVYDITSQDSFAAVQSW--- 57
Query: 139 LQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEEN 198
V+ELQ NI + +AGNK DL R V Y+ GE+YA++
Sbjct: 58 ------------------VRELQAHGEHNIALGIAGNKCDLQDYRE-VSYATGESYAQQI 98
Query: 199 GLLFMETSAKTAMNVNEIFVEIAKKLPK 226
+F+ETSA A N+ E+F+ IA K+P+
Sbjct: 99 NAVFVETSALRATNIQELFMGIASKVPQ 126
>gi|241564928|ref|XP_002401968.1| RAS-related protein, putative [Ixodes scapularis]
gi|215501944|gb|EEC11438.1| RAS-related protein, putative [Ixodes scapularis]
Length = 148
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 90/148 (60%), Gaps = 22/148 (14%)
Query: 79 ITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKE 138
+ + + L D T++F IWDTAGQERY LAPMYYR A AAIIVYDIT+QD+F +SW
Sbjct: 1 MMKNMVLHDRTLKFNIWDTAGQERYRALAPMYYRGAAAAIIVYDITSQDSFAAVQSW--- 57
Query: 139 LQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEEN 198
V+ELQ NI + +AGNK DL R V Y+ GE+YA++
Sbjct: 58 ------------------VRELQAHGEHNIALGIAGNKCDLQDYRE-VSYATGESYAQQI 98
Query: 199 GLLFMETSAKTAMNVNEIFVEIAKKLPK 226
+F+ETSA A N+ E+F+ IA K+P+
Sbjct: 99 NAVFVETSALRATNIQELFMGIASKVPQ 126
>gi|301772696|ref|XP_002921772.1| PREDICTED: ras-related protein Rab-31-like [Ailuropoda melanoleuca]
Length = 197
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 43 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKW 102
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL R V + + YA
Sbjct: 103 V---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKEYA 140
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGGRRLVETAEAPKTSNCC 251
E G + +ETSAK A+N+ E+F I++++P + + NG G + + CC
Sbjct: 141 ESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGAIKLGKQATQASRRCC 197
>gi|73535775|pdb|1Z0J|A Chain A, Structure Of Gtp-Bound Rab22q64l Gtpase In Complex With
The Minimal Rab Binding Domain Of Rabenosyn-5
Length = 170
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 96/150 (64%), Gaps = 22/150 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAG ER+ LAPMYYR + AAIIVYDIT ++TF K+W
Sbjct: 41 ASFMTKTVQYQNELHKFLIWDTAGLERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNW 100
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+ EL++ PP+IV+A+AGNK DL R +E + + YA
Sbjct: 101 VR---------------------ELRQHGPPSIVVAIAGNKCDLTDVREVME-RDAKDYA 138
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
+ +F+ETSAK A+N+NE+F+EI++++P
Sbjct: 139 DSIHAIFVETSAKNAININELFIEISRRIP 168
>gi|355714893|gb|AES05152.1| RAB31, member RAS oncoprotein family [Mustela putorius furo]
Length = 194
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 100/177 (56%), Gaps = 35/177 (19%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 99 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKL----PKKEVNNG---------QGGRR 237
YAE G + +ETSAK A+N+ E+F I++++ P + NNG Q GRR
Sbjct: 137 YAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGAIKLGKQTTQAGRR 193
>gi|296473718|tpg|DAA15833.1| TPA: RAB31, member RAS oncogene family [Bos taurus]
Length = 182
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 97/161 (60%), Gaps = 23/161 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 41 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKW 100
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL R V + + YA
Sbjct: 101 V---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKEYA 138
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGG 235
E G + +ETSAK A+N+ E+F I++++P + + NG G
Sbjct: 139 ESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNSG 179
>gi|225679760|gb|EEH18044.1| GTP-binding protein RAB22A [Paracoccidioides brasiliensis Pb03]
Length = 215
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 104/185 (56%), Gaps = 35/185 (18%)
Query: 78 FITQTVCLDDVTI---RFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
F+TQT+ LD+ T+ R+ I ++ + LAPMYYRNA A++VYDIT + +AKS
Sbjct: 52 FLTQTISLDESTLLSSRYGILLV--KKDTNLLAPMYYRNANCAVVVYDITQASSLDKAKS 109
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---PTSRRCVEYSEG 191
WVK ELQR A NI+IALAGNK DL +R ++ ++
Sbjct: 110 WVK---------------------ELQRQANENIIIALAGNKLDLVMDSPDKRAIQTADA 148
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV------NNGQGGRRLVETAEAP 245
EAYA E GLLF ETSAK+A NV E+F IAKKLP + +N + G L A P
Sbjct: 149 EAYAREAGLLFFETSAKSATNVRELFTAIAKKLPLDQAGPRNLRSNPRPGVDLRPEAAGP 208
Query: 246 KTSNC 250
+ +NC
Sbjct: 209 QANNC 213
>gi|68481999|ref|XP_715017.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46436619|gb|EAK95978.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238878219|gb|EEQ41857.1| GTP-binding protein ypt5 [Candida albicans WO-1]
Length = 221
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 100/169 (59%), Gaps = 29/169 (17%)
Query: 76 AAFITQTVCL--DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQT+ + + TI+FEIWDTAGQERY +LAPMYYRNA AA+ VYDIT++ +F +A+
Sbjct: 47 AAFLTQTITIPESETTIKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFQKAQ 106
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
W+K EL++ AP IVIAL GNK+DL R VE SE +
Sbjct: 107 DWIK---------------------ELKKQAPEGIVIALVGNKSDLDDERE-VESSEVQE 144
Query: 194 YAEEN-----GLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRR 237
Y +E ++ E SAK+ V ++F +I + LP EV + R+
Sbjct: 145 YVQEQNSDGCSIITAECSAKSGDGVLDVFNKIGRALPVDEVIDASRSRQ 193
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 288 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
N Q+ + Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 3 NKQSNQRFAQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGA 47
>gi|403214773|emb|CCK69273.1| hypothetical protein KNAG_0C01600 [Kazachstania naganishii CBS
8797]
Length = 214
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 109/197 (55%), Gaps = 40/197 (20%)
Query: 76 AAFITQTVCLD-----DVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFG 130
AAF++QT+ ++ +V I+FEIWDTAGQERY +LAPMYYRNA AA++VYD+T +D+
Sbjct: 38 AAFLSQTIKVESEDQQEVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDVTQEDSLN 97
Query: 131 RAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-----PTSRRC 185
+AK+WV+EL+ ++ ++VI L GNK DL +R
Sbjct: 98 KAKAWVEELK--------------------NKVGDEDLVIFLVGNKVDLCEGSDNEDKRA 137
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL--PKKEV------NNGQGGRR 237
V + + YAE+ GL+F E SAKT V E+F I ++L KKE NG G+
Sbjct: 138 VAATLAKQYAEDQGLMFDEVSAKTGHGVKEVFQAIGQRLYDTKKEELATRQRGNGNDGQV 197
Query: 238 LVETAEAP--KTSNCCN 252
+ T+ CC+
Sbjct: 198 DINVPRPSTNDTTGCCS 214
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGA 38
>gi|126314342|ref|XP_001375196.1| PREDICTED: ras-related protein Rab-17-like [Monodelphis domestica]
Length = 214
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 102/180 (56%), Gaps = 26/180 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T + +D ++ E+WDTAGQE+YH++ +Y+R A AA++VYDI +DTF RA++W
Sbjct: 54 AFFTHMMEVDGKALKLELWDTAGQEKYHSVCHLYFRGANAALLVYDIAKKDTFHRAQNWW 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
KEL+ E Q P IV+ L GNK DL SR V + EG+ ++E
Sbjct: 114 KELEN-----------------EFQ---PEEIVVILVGNKMDLEDSRE-VTFEEGKTFSE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRL-----VETAEAPKTSNCC 251
N LLFMETSAK V E F IA++L ++E +G ++ +E + + K CC
Sbjct: 153 SNKLLFMETSAKLNYQVTEAFTAIARELLQREEQHGGPAQQKNPSIDLENSASQKKGKCC 212
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 281 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHE 324
GG + D Q I +K+VLLG S+VGKSSL LRF++ F E
Sbjct: 5 GGNPRSDGDSQQPSI--FKVVLLGSSSVGKSSLALRFLKNDFRE 46
>gi|189188490|ref|XP_001930584.1| GTP-binding protein YPT52 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330926522|ref|XP_003301495.1| hypothetical protein PTT_13015 [Pyrenophora teres f. teres 0-1]
gi|187972190|gb|EDU39689.1| GTP-binding protein YPT52 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311323627|gb|EFQ90397.1| hypothetical protein PTT_13015 [Pyrenophora teres f. teres 0-1]
Length = 243
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 97/187 (51%), Gaps = 50/187 (26%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT + +A+ W
Sbjct: 48 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPSSLTKAQHW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
V EL R A P IVIAL GNK DL
Sbjct: 108 V---------------------AELHRQASPGIVIALVGNKFDLAAAAGEESPEDADAAP 146
Query: 180 -------PT-----SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
PT SRR V ++YA+E LLF ETSAKT NV ++F IA +P+
Sbjct: 147 AAEGDEEPTEDGADSRR-VPSKTAKSYADEESLLFFETSAKTGHNVADVFTAIANAIPET 205
Query: 228 EVNNGQG 234
+ +G
Sbjct: 206 SLKGPRG 212
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLV+RFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVMRFVNNDFQENKEPTIG 47
>gi|408397097|gb|EKJ76247.1| hypothetical protein FPSE_03502 [Fusarium pseudograminearum CS3096]
Length = 234
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 95/177 (53%), Gaps = 40/177 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 48 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V E LQR A P IVIAL GNK DL ++GE
Sbjct: 108 VAE---------------------LQRQASPGIVIALVGNKLDLTGDSSSAAGADGE-EG 145
Query: 196 EENG------------------LLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
+++G LLF ETSAK+ NV E+F IA +P+ + + +G
Sbjct: 146 DDSGDARKVPTEEAQAYAEEESLLFFETSAKSGHNVTEVFTAIANAIPETSLKSARG 202
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 47
>gi|365759643|gb|EHN01421.1| Ypt52p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 234
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 113/218 (51%), Gaps = 62/218 (28%)
Query: 76 AAFITQTVCL--------DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQD 127
AAF++Q++ + DV I+FEIWDTAGQERY +LAPMYYRNA AA++VYDIT +D
Sbjct: 38 AAFLSQSITIHPNDGNGAKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQED 97
Query: 128 TFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL----PTSR 183
+ +A++WV EL+ ++ ++VI L GNK DL P S
Sbjct: 98 SLQKARNWVDELKN--------------------KVGDDDLVIYLLGNKVDLCQDMPGSE 137
Query: 184 RCVEYSEGE---------------AYAEENGLLFMETSAKTAMNVNEIFVEIAKKL---- 224
E +EGE YA+E GLLF E SAKT + EIF +I +KL
Sbjct: 138 TIPELNEGEDDEQKVRAISTEEAKQYAQEQGLLFREVSAKTGDGIKEIFQDIGEKLYDSK 197
Query: 225 -------PKKEVNNGQGGRRLVETAEAPKTSN---CCN 252
+++N G G+ + + P T++ CC+
Sbjct: 198 KDEILSKQNRQINGGNNGQVDIHL-QRPSTNDPTSCCS 234
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNV 354
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG S SI+ P +V
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAF-LSQSITIH-PNDGNGAKDV 58
Query: 355 PITF-VW 360
I F +W
Sbjct: 59 VIKFEIW 65
>gi|348541887|ref|XP_003458418.1| PREDICTED: ras-related protein Rab-17-like [Oreochromis niloticus]
Length = 236
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 91/153 (59%), Gaps = 21/153 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
A++TQ V L + T+RFEIWDTAGQE+YH++ P+YYR A A++VYDIT ++TF RA+ W+
Sbjct: 62 AYLTQVVHLSNATLRFEIWDTAGQEKYHSVTPLYYRGAHVALLVYDITQRETFVRAQVWL 121
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
KEL++ + P + VI L GNK DL R+ V EGE+ A
Sbjct: 122 KELEK--------------------QYIPGSTVIWLVGNKGDLAHDRQ-VPLEEGESLAS 160
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV 229
GL F+ETSA + VNE+ + KK E+
Sbjct: 161 NKGLYFIETSALSGEQVNELLQSVGKKKETLEI 193
>gi|326917442|ref|XP_003205008.1| PREDICTED: ras-related protein Rab-31-like [Meleagris gallopavo]
Length = 236
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 97/161 (60%), Gaps = 23/161 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 82 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKW 141
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL R V + + YA
Sbjct: 142 V---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPMKDAKEYA 179
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGG 235
E G + +ETSAK A+N+ E+F I++++P + + NG G
Sbjct: 180 ESIGAIVVETSAKNAVNIEELFQGISQQIPPLDPHENGNNG 220
>gi|297265181|ref|XP_001091918.2| PREDICTED: ras-related protein Rab-17 [Macaca mulatta]
Length = 212
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 105/178 (58%), Gaps = 24/178 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDVGTASLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ KEL P +++ L GNK DL R V + EG+ +AE
Sbjct: 114 KDLE-----------------KELH---PEEVLVMLVGNKTDLSEERE-VTFQEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETA--EAP-KTSNCC 251
LLFMETSAK V+E+F +A++L +++ GQ +R A E P + + CC
Sbjct: 153 SQKLLFMETSAKLNYQVSEVFSAVAQELLQRDDREGQALQRDAAVALNEGPARQAKCC 210
>gi|363730697|ref|XP_428301.3| PREDICTED: ras-related protein Rab-31 [Gallus gallus]
Length = 226
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 97/163 (59%), Gaps = 23/163 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 70 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 129
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 130 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPMKDAKE 167
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN-NGQGG 235
YAE G + +ETSAK A+N+ E+F I++++P + + NG G
Sbjct: 168 YAESIGAIVVETSAKNAVNIEELFQGISQQIPPLDPHENGNNG 210
>gi|322699601|gb|EFY91361.1| Rab5-like protein ypt51 [Metarhizium acridum CQMa 102]
Length = 246
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 97/185 (52%), Gaps = 42/185 (22%)
Query: 69 FYPYL-FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQD 127
P++ AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T
Sbjct: 53 LTPHVCLKAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPT 112
Query: 128 TFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVE 187
+ +AK WV E LQR A P IVIAL GNK DL +
Sbjct: 113 SLIKAKHWVAE---------------------LQRQASPGIVIALVGNKLDLASD--SAT 149
Query: 188 YSEGEAYAEENG------------------LLFMETSAKTAMNVNEIFVEIAKKLPKKEV 229
+E EE+G LLF ETSAKT NV E+F IA +P+ +
Sbjct: 150 GNETAEDGEESGDARKVSTEEAKAYAEEESLLFFETSAKTGHNVTEVFTAIANAIPETSL 209
Query: 230 NNGQG 234
+ +G
Sbjct: 210 KSARG 214
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 47
>gi|349802461|gb|AEQ16703.1| putative muscle ras oncogene [Pipa carvalhoi]
Length = 130
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 65/79 (82%)
Query: 69 FYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDT 128
F AAF+ Q+VCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+V+DIT +T
Sbjct: 47 FQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPET 106
Query: 129 FGRAKSWVKELQRMAPPNI 147
F RAK+WVKELQR A PNI
Sbjct: 107 FDRAKAWVKELQRQASPNI 125
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 45/64 (70%), Gaps = 10/64 (15%)
Query: 269 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 328
MAN S +NG G Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+
Sbjct: 1 MANRTGSRANGLG----------QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQET 50
Query: 329 TIGG 332
TIG
Sbjct: 51 TIGA 54
>gi|345306923|ref|XP_001507705.2| PREDICTED: ras-related protein Rab-17-like [Ornithorhynchus
anatinus]
Length = 171
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 91/157 (57%), Gaps = 21/157 (13%)
Query: 72 YLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGR 131
++ AF + VCLD+ T++FEIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +
Sbjct: 6 WVKEGAFFSHLVCLDNATLKFEIWDTAGQEKYHSVCHLYFRGASAALLVYDITKKDSFHK 65
Query: 132 AKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEG 191
A+ W++EL+ + VI L GNK DL R E EG
Sbjct: 66 AQQWLRELE--------------------NEILNDETVIMLVGNKTDLMDEREVTE-EEG 104
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
+ +AE LLF+E SAK V EIF IA++L KE
Sbjct: 105 KEFAESKKLLFLEASAKENHQVTEIFTAIAQELLLKE 141
>gi|432911409|ref|XP_004078665.1| PREDICTED: ras-related protein Rab-31-like [Oryzias latipes]
Length = 194
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 98/177 (55%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT D+F K W
Sbjct: 40 ASFLTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL+ P +IV+A+AGNK DL R V E + +A
Sbjct: 100 ---------------------VKELKEHGPEDIVVAIAGNKNDLGDIRE-VPMKEAKEFA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRL-VETAEAPKTSNCC 251
E +F+ETSA+ A+NV E+F +I+K++P E + P T CC
Sbjct: 138 ESIAAIFIETSARNAVNVEELFQKISKQIPPLENPEADSNDSFKLNRQPTPSTRRCC 194
>gi|365758696|gb|EHN00526.1| Ypt53p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 220
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 94/155 (60%), Gaps = 26/155 (16%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+T+ + +D I+FEIWDTAGQER+ LAPMYYRNAQAA++V+DITN+ +F +A++W
Sbjct: 47 AAFLTKRITRNDKAIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDITNEQSFRKAQNW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT-----SRRCVEYSE 190
V+EL + G NI+IAL GNK DL T S R V E
Sbjct: 107 VEELH-------EKLG--------------DNIIIALVGNKMDLLTMQGEISNRAVNEDE 145
Query: 191 GEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
+ ++ LL+ E SAKT N+ E+F + +K+P
Sbjct: 146 IQNLCQQENLLYFEVSAKTGKNIQEVFQAVGEKIP 180
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGESAVGKSS+VLRF+ F E +E TIG
Sbjct: 14 KLVLLGESAVGKSSIVLRFISNDFTESREPTIGA 47
>gi|357612151|gb|EHJ67842.1| Ras-related small GTPase [Danaus plexippus]
Length = 208
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 101/184 (54%), Gaps = 27/184 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A F+ + + ++ I IWDTAGQE++H L P+YYRN+ AI+VYDIT++D+FG+ K
Sbjct: 43 LQATFLNKKLNINGKRINLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFGKVK 102
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
+W VKEL++M +IV+ +AGNK DL R V E E+
Sbjct: 103 NW---------------------VKELRKMLGSDIVLVIAGNKIDLEQD-RTVPLEEAES 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG-----GRRLVETAEAPKTS 248
YA G TSAK V E+F+E+ +++ ++ N Q R LV EAP+ S
Sbjct: 141 YAVMVGARHFNTSAKMNQGVEELFLELTREMTERFEQNSQADVSRTSRVLVVEDEAPQQS 200
Query: 249 NCCN 252
+CC+
Sbjct: 201 SCCS 204
>gi|355750951|gb|EHH55278.1| hypothetical protein EGM_04445 [Macaca fascicularis]
Length = 212
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 105/178 (58%), Gaps = 24/178 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDVGTASLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ KEL P +++ L GNK DL + R V + EG+ +AE
Sbjct: 114 KDLE-----------------KELH---PEEVLVMLVGNKTDL-SEEREVTFQEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GRRLVETAEAP-KTSNCC 251
LLFMETSAK V+E+F +A++L +++ GQ G V E P + + CC
Sbjct: 153 SQKLLFMETSAKLNYQVSEVFSAVAQELLQRDDRQGQAPQGDAAVALNEGPARQAKCC 210
>gi|355565307|gb|EHH21796.1| hypothetical protein EGK_04937 [Macaca mulatta]
Length = 212
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 105/178 (58%), Gaps = 24/178 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDVGTASLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ KEL P +++ L GNK DL + R V + EG+ +AE
Sbjct: 114 KDLE-----------------KELH---PEEVLVMLVGNKTDL-SEEREVTFQEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GRRLVETAEAP-KTSNCC 251
LLFMETSAK V+E+F +A++L +++ GQ G V E P + + CC
Sbjct: 153 SQKLLFMETSAKLNYQVSEVFSAVAQELLQRDDREGQAPQGDAAVALNEGPARQAKCC 210
>gi|6322866|ref|NP_012939.1| Ypt52p [Saccharomyces cerevisiae S288c]
gi|549796|sp|P36018.1|YPT52_YEAST RecName: Full=GTP-binding protein YPT52
gi|483599|emb|CAA53770.1| ypt52p [Saccharomyces cerevisiae]
gi|486429|emb|CAA82086.1| YPT52 [Saccharomyces cerevisiae]
gi|151941558|gb|EDN59921.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190409836|gb|EDV13101.1| GTP-binding protein YPT52 [Saccharomyces cerevisiae RM11-1a]
gi|207343416|gb|EDZ70879.1| YKR014Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272630|gb|EEU07608.1| Ypt52p [Saccharomyces cerevisiae JAY291]
gi|259147845|emb|CAY81095.1| Ypt52p [Saccharomyces cerevisiae EC1118]
gi|285813272|tpg|DAA09169.1| TPA: Ypt52p [Saccharomyces cerevisiae S288c]
gi|323304136|gb|EGA57914.1| Ypt52p [Saccharomyces cerevisiae FostersB]
gi|323308216|gb|EGA61465.1| Ypt52p [Saccharomyces cerevisiae FostersO]
gi|323332610|gb|EGA74016.1| Ypt52p [Saccharomyces cerevisiae AWRI796]
gi|323336757|gb|EGA78021.1| Ypt52p [Saccharomyces cerevisiae Vin13]
gi|323347623|gb|EGA81888.1| Ypt52p [Saccharomyces cerevisiae Lalvin QA23]
gi|349579576|dbj|GAA24738.1| K7_Ypt52p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365764667|gb|EHN06189.1| Ypt52p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298155|gb|EIW09253.1| Ypt52p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 234
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 110/218 (50%), Gaps = 62/218 (28%)
Query: 76 AAFITQTVCL--------DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQD 127
AAF++Q++ + DV I+FEIWDTAGQERY +LAPMYYRNA AA++VYDIT +D
Sbjct: 38 AAFLSQSITIHPNDGNETKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQED 97
Query: 128 TFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-------- 179
+ +A++WV EL+ ++ ++VI L GNK DL
Sbjct: 98 SLQKARNWVDELKN--------------------KVGDDDLVIYLLGNKVDLCQETPSTE 137
Query: 180 --PTSR---------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKK---LP 225
P S R + E + YA+E GLLF E SAKT V EIF +I +K L
Sbjct: 138 TSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKEIFQDIGEKLYDLK 197
Query: 226 KKEV-----------NNGQGGRRLVETAEAPKTSNCCN 252
K E+ NNGQ L + TS CC+
Sbjct: 198 KDEILSKQNRQIGGGNNGQVDINLQRPSTNDPTS-CCS 234
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNV 354
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG S SI+ P +V
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAF-LSQSITI-HPNDGNETKDV 58
Query: 355 PITF-VW 360
I F +W
Sbjct: 59 VIKFEIW 65
>gi|291190727|ref|NP_001167048.1| Ras-related protein Rab-31 [Salmo salar]
gi|223647850|gb|ACN10683.1| Ras-related protein Rab-31 [Salmo salar]
Length = 194
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 98/177 (55%), Gaps = 23/177 (12%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT D+F K W
Sbjct: 40 ASFLTKTVPCGHELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL+ P +IV+A+AGNK DL R V E + +A
Sbjct: 100 ---------------------VKELKEHGPEDIVVAIAGNKNDLGDIRE-VPMKEAKDFA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRL-VETAEAPKTSNCC 251
E +FMETSA+ A+NV E+F +I+K++P E + + + P CC
Sbjct: 138 ESIAAIFMETSARNAVNVEELFQKISKQIPPLENPDLESNESFKIIRQPPPSNKRCC 194
>gi|88192998|pdb|2FG5|A Chain A, Crystal Structure Of Human Rab31 In Complex With A Gtp
Analogue
Length = 192
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 92/152 (60%), Gaps = 22/152 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 56 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK 115
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WV KEL+ P NIV+A+AGNK DL R V + +
Sbjct: 116 KWV---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKE 153
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
YAE G + +ETSAK A+N+ E+F I++++P
Sbjct: 154 YAESIGAIVVETSAKNAINIEELFQGISRQIP 185
>gi|156382558|ref|XP_001632620.1| predicted protein [Nematostella vectensis]
gi|156219678|gb|EDO40557.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 112/201 (55%), Gaps = 28/201 (13%)
Query: 59 CMTQIVINVVF---YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQ 115
C+ ++ +F P AAF+T+ + ++D +F IWDTAGQER+ +LAP+YYR+A
Sbjct: 27 CLVHRFVSDIFNASSPPTIGAAFMTKMMIVNDKAYKFNIWDTAGQERFKSLAPLYYRDAA 86
Query: 116 AAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGN 175
AAI+VYDIT + TF + W++ ELQR P +IVIA+AGN
Sbjct: 87 AAILVYDITIESTFHSLRPWIR---------------------ELQRYGPQDIVIAVAGN 125
Query: 176 KADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG 235
K D +R V+ + + +A +F ETSA T+ NV+ +F E+ KKLP + +
Sbjct: 126 KCD-KADQRDVQVQDAQDFAGSVDAIFAETSALTSKNVHWLFEELCKKLPHENMEVPYHH 184
Query: 236 RRL--VETAEAP-KTSNCCNT 253
+++ E P K+ NCC++
Sbjct: 185 KKIGTFRPEERPNKSGNCCSS 205
>gi|73994202|ref|XP_848805.1| PREDICTED: ras-related protein Rab-17 [Canis lupus familiaris]
Length = 213
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 96/160 (60%), Gaps = 23/160 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V L V+++FEIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVELGAVSLKFEIWDTAGQEKYHSICHLYFRGANAALLVYDITRKDSFCKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
++L+R P +V+ L GNK DL R V + EG+ +AE
Sbjct: 114 QDLERQVPAG--------------------EVVVMLVGNKTDLGEQRE-VTFQEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR 236
LLFME SAK V E+F +A++L ++E G+ GR
Sbjct: 153 SKRLLFMEASAKLNHQVTEVFSALARELLRRE--EGKQGR 190
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 296 CQYKLVLLGESAVGKSSLVLRFVRGQF 322
C +KLVLLG +VGKSSL LR+V+ F
Sbjct: 18 CVFKLVLLGSGSVGKSSLALRYVKNDF 44
>gi|358379349|gb|EHK17029.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 229
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 96/174 (55%), Gaps = 36/174 (20%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYDIT + +A+ W
Sbjct: 45 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPTSLVKARHW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLP--------------- 180
V E LQR A P IVIAL GNK DL
Sbjct: 105 VAE---------------------LQRQASPGIVIALVGNKLDLAGESQGASEEAEGGEE 143
Query: 181 TSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R V E +AYAEE LLF ETSAKT NV E+F IA +P+ + + +G
Sbjct: 144 GDARKVSTEEAQAYAEEESLLFFETSAKTGHNVTEVFTAIANAIPETSLKSARG 197
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 45
>gi|384499462|gb|EIE89953.1| hypothetical protein RO3G_14664 [Rhizopus delemar RA 99-880]
Length = 193
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 92/152 (60%), Gaps = 26/152 (17%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+ + ++D I+F+IWDTAGQER+ +LAPMYYRNA AA+IV+D+TN ++F AK W
Sbjct: 48 AAFLAKICSIEDRIIKFDIWDTAGQERFRSLAPMYYRNAAAAMIVFDVTNYNSFTGAKRW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V EL P +++IAL GNK DL R+ V E + Y
Sbjct: 108 VDEL-------------------------PLDVMIALVGNKIDLEQDRQ-VSVDEIKEYV 141
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
E L+++ETSA+ +N++ +F EIAK +P K
Sbjct: 142 AEKDLIYIETSARLGINIHHVFNEIAKNVPLK 173
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG+S+VGKSS++ ++V F E +E TIG
Sbjct: 15 KLVLLGDSSVGKSSIITKYVTDTFIEGREVTIGA 48
>gi|123482533|ref|XP_001323810.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|67944359|gb|AAY83815.1| small Rab GTPase Rab5a [Trichomonas vaginalis]
gi|121906682|gb|EAY11587.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 201
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 104/178 (58%), Gaps = 24/178 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+++T+ L D ++ +IWDT G ERY +APMY++NA AAIIVYDIT+ ++ +SW
Sbjct: 46 AAFLSKTINLGDQELKLQIWDTGGSERYRAMAPMYFQNANAAIIVYDITSSTSYNDVESW 105
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
+KEL+ P +I+IALAGNK+DL +RCV + +++A
Sbjct: 106 ---------------------LKELREKGPASIIIALAGNKSDLD-QQRCVATEDAQSFA 143
Query: 196 EENGL-LFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR-RLVETAEAPKTSNCC 251
+++G+ +F ETSA +N+ EIF ++A + + V+ + L E+ K CC
Sbjct: 144 QKHGIPIFKETSALKGINIQEIFTDVAVAIARGAVSTAPAEQVTLTESNPKDKKKKCC 201
>gi|429963305|gb|ELA42849.1| small GTP-binding protein domain protein [Vittaforma corneae ATCC
50505]
Length = 189
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 105/176 (59%), Gaps = 26/176 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+T+ + +++EIWDTAGQERY++L PMYYR AQ A+IVYDIT+Q++F AK W
Sbjct: 40 ASFLTKTIFQNRCAVKYEIWDTAGQERYYSLIPMYYRGAQVALIVYDITSQESFESAKRW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+EL+ + + + ++K L NK DL S ++ G AYA
Sbjct: 100 VEELK---------YDKPQEFLK------------VLVANKMDLRES-AMLDPEVGRAYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
E GL+F ETSAKT N+ ++F +IA+ LP K++ G RL + K + CC
Sbjct: 138 ENEGLMFYETSAKTGHNIQKMFSDIAEALP-KDIRKTVDGVRL---RKPRKNTFCC 189
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K YK+V+LG +VGKSS+VL FV+G+F+ +ESTIG
Sbjct: 2 KTFTYKMVVLGHYSVGKSSIVLNFVKGEFNPREESTIGA 40
>gi|342877497|gb|EGU78949.1| hypothetical protein FOXB_10549 [Fusarium oxysporum Fo5176]
Length = 235
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 97/177 (54%), Gaps = 39/177 (22%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 48 AAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLP--------------- 180
V E LQR A P IVIAL GNK DL
Sbjct: 108 VAE---------------------LQRQASPGIVIALVGNKLDLTGDSGAAADGEDGEEG 146
Query: 181 ---TSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
R V E +AYAEE GLLF ETSAK+ NV E+F IA +P+ + + +G
Sbjct: 147 DDSGDARKVPTEEAQAYAEEEGLLFFETSAKSGHNVTEVFTAIANAIPETSLKSARG 203
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIG 47
>gi|387540276|gb|AFJ70765.1| ras-related protein Rab-17 [Macaca mulatta]
Length = 212
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 105/178 (58%), Gaps = 24/178 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDVGTASLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ KEL P +++ L GNK DL + R V + EG+ +A+
Sbjct: 114 KDLE-----------------KELH---PEEVLVMLVGNKTDL-SEEREVTFQEGKEFAD 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GRRLVETAEAP-KTSNCC 251
LLFMETSAK V+E+F +A++L +++ GQ G V E P + + CC
Sbjct: 153 SQKLLFMETSAKLNYQVSEVFSAVAQELLQRDDREGQAPQGDAAVALNEGPARQAKCC 210
>gi|426372979|ref|XP_004053390.1| PREDICTED: ras-related protein Rab-5B [Gorilla gorilla gorilla]
Length = 155
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 84/113 (74%), Gaps = 6/113 (5%)
Query: 145 PNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFME 204
P +TF RAK+WVKELQR A P+IVIALAGNKADL ++R VEY E +AYA++N LLFME
Sbjct: 43 PLEETFARAKTWVKELQRQASPSIVIALAGNKADL-ANKRMVEYEEAQAYADDNSLLFME 101
Query: 205 TSAKTAMNVNEIFVEIAKKLPKKEVNN--GQGGR-RLVETAEAPK--TSNCCN 252
TSAKTAMNVN++F+ IAKKLPK E N G GR R V+ E + S CC+
Sbjct: 102 TSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCS 154
>gi|365983882|ref|XP_003668774.1| hypothetical protein NDAI_0B04980 [Naumovozyma dairenensis CBS 421]
gi|343767541|emb|CCD23531.1| hypothetical protein NDAI_0B04980 [Naumovozyma dairenensis CBS 421]
Length = 227
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 99/187 (52%), Gaps = 37/187 (19%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYY 111
++KD D + + I F L I T +D+ I+FEIWDTAGQERY +LAPMYY
Sbjct: 23 FVKDSFDELRESTIGAAF---LAQTIKIKDTETQEDIDIKFEIWDTAGQERYKSLAPMYY 79
Query: 112 RNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIA 171
RNA AA++VYD+T +++ +A SWV EL+ ++ ++VI
Sbjct: 80 RNANAALVVYDLTQKNSLSKAMSWVDELK--------------------SKVGDEDLVIY 119
Query: 172 LAGNKADL--------------PTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIF 217
L GNK DL ++R V E ++YA++ GLLF E SAKT V E+F
Sbjct: 120 LVGNKLDLCDNVENRGGKEQEEEENKRVVTTQEADSYAKDQGLLFAEISAKTGQGVKEVF 179
Query: 218 VEIAKKL 224
I +KL
Sbjct: 180 QTIGEKL 186
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDELRESTIGA 38
>gi|448087841|ref|XP_004196426.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
gi|359377848|emb|CCE86231.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
Length = 223
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 104/195 (53%), Gaps = 41/195 (21%)
Query: 76 AAFITQTVCLDD--VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ+V L + T++FEIWDTAGQERY +LAPMYYRNA AA+ VYDIT++ +F RA+
Sbjct: 51 AAFLTQSVKLPEKSATVKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFNRAQ 110
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
W+KE L++ AP NI I L GNK D+ R V E +
Sbjct: 111 EWIKE---------------------LKKQAPENITICLVGNKTDMQEERE-VNQEEVDE 148
Query: 194 YA-----EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV------NNGQGGRRL--VE 240
Y E L+ E SAK+ V EIF IA LP +EV N G RR V+
Sbjct: 149 YITQLQNEGTILISGECSAKSGDGVLEIFTHIANALPVEEVINNSPRNRSLGSRRSAGVD 208
Query: 241 TAEAPK----TSNCC 251
APK + CC
Sbjct: 209 LGRAPKQNQANTGCC 223
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 13 RFAQFKLVLLGESAVGKSSIVHRFVKNSFDDMRESTIGA 51
>gi|281208030|gb|EFA82208.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 230
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 93/158 (58%), Gaps = 26/158 (16%)
Query: 74 FSAAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRA 132
AAF+ + + L++ T ++ EIWDTAGQERY +L PMYYR A AA+IVYDIT ++TF
Sbjct: 71 IGAAFLVKNMVLENGTNVKLEIWDTAGQERYRSLTPMYYRGASAAVIVYDITKKNTFETL 130
Query: 133 KSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGE 192
K WV E LQ+ A PN+++A AGNK DLP R V+ E
Sbjct: 131 KRWVSE---------------------LQKQASPNLIMAFAGNKVDLP--NREVQVDEVS 167
Query: 193 AYAEENG--LLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
Y E G ++F ETSA+T NV E+F EI +K+ + E
Sbjct: 168 KYISELGGDIIFFETSAQTGYNVTELFNEICRKIKELE 205
>gi|410969692|ref|XP_003991327.1| PREDICTED: ras-related protein Rab-17 [Felis catus]
Length = 213
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 92/152 (60%), Gaps = 21/152 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ + L V ++ EIWDTAGQE+YH++ +Y+R A AI+VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKELELGAVAVKLEIWDTAGQEKYHSVCRLYFRGASGAILVYDITRRDSFCKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
++L+R APP +V+ L GNK D+ RR V + EG+ +AE
Sbjct: 114 QDLEREAPPG--------------------EVVVMLVGNKTDV-GERREVTFQEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
LLFME SAK V E+F IA++L ++E
Sbjct: 153 SKKLLFMEASAKLNHQVTEVFSTIAQELLQRE 184
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQF 322
+KLVLLG S+VGKSSL LR+V+ F
Sbjct: 20 FKLVLLGSSSVGKSSLALRYVKNDF 44
>gi|344292466|ref|XP_003417948.1| PREDICTED: ras-related protein Rab-17-like [Loxodonta africana]
Length = 212
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 100/178 (56%), Gaps = 24/178 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V ++ +++FEIWDTAGQE+YH++ +Y R A AA++VYDIT++D+F RA+SW+
Sbjct: 54 AFFTKVVHMEAASLKFEIWDTAGQEKYHSVCHLYLRGANAALLVYDITSKDSFVRAQSWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ P +V+ L GNK DL R V + EG+ +AE
Sbjct: 114 KDLE--------------------SEFLPGEVVVMLLGNKTDLNKERE-VTFEEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR---RLVETAEAPKTSNCC 251
LLFMETSA+ V E F +A++L ++E G + R+ P+ CC
Sbjct: 153 SKKLLFMETSARLNHQVTEAFSAVARELLQREETVGPTQKENARVALNEGPPRQVRCC 210
>gi|402889794|ref|XP_003908187.1| PREDICTED: ras-related protein Rab-17 isoform 1 [Papio anubis]
Length = 209
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 102/175 (58%), Gaps = 21/175 (12%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDVGTASLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ KEL P +++ L GNK DL + R V + EG+ +AE
Sbjct: 114 KDLE-----------------KELH---PEEVLVMLVGNKTDL-SEEREVTFQEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
LLFMETSAK V+E+F +A++L +++ GQ + + + CC
Sbjct: 153 SQKLLFMETSAKLNYQVSEVFSAVAQELLQRDDREGQAPQGDALNEGPARQAKCC 207
>gi|395733010|ref|XP_002813085.2| PREDICTED: ras-related protein Rab-17-like [Pongo abelii]
Length = 174
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 104/180 (57%), Gaps = 24/180 (13%)
Query: 75 SAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
S AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+
Sbjct: 14 SGAFFTKVVDVGAASLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQ 73
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W+K+L+ + + P +++ L GNK DL R V + EG+ +
Sbjct: 74 WLKDLE--------------------EELHPGEVLVMLVGNKTDLSQERE-VTFQEGKEF 112
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GRRLVETAEAP-KTSNCC 251
A+ LLFMETSAK V+E+F +A++L +++ GQ G V E P + + CC
Sbjct: 113 ADSQKLLFMETSAKLNHQVSEVFNTMAQELLQRDDREGQAPRGDAAVALNEGPARQAKCC 172
>gi|50306401|ref|XP_453174.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642308|emb|CAH00270.1| KLLA0D02376p [Kluyveromyces lactis]
Length = 207
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 95/156 (60%), Gaps = 27/156 (17%)
Query: 76 AAFITQTVCL----DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGR 131
AAF++QT+ L D+ ++FEIWDTAGQERY +LAPMYYRNA AA++VYD+T D+ +
Sbjct: 38 AAFLSQTIKLSEEYDEQVLKFEIWDTAGQERYKSLAPMYYRNANAALVVYDVTEPDSLPK 97
Query: 132 AKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC---VEY 188
AK WV EL+ +++ ++I L GNK DL + R V+
Sbjct: 98 AKLWVDELK--------------------EKVNDDKLIICLVGNKLDLVSERESTSLVDE 137
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
++ +A+EN LLF + SAKT NV ++F +I ++L
Sbjct: 138 ADAREFAQENNLLFHQVSAKTGENVIKVFQDIGERL 173
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLG+S+VGKSS+V RFV+ F EY+ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDEYRESTIGA 38
>gi|401623893|gb|EJS41973.1| ypt53p [Saccharomyces arboricola H-6]
Length = 220
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 91/155 (58%), Gaps = 26/155 (16%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+T+ D TI+FEIWDTAGQER+ LAPMYYRNAQAA++V+DITN+ +F +A+ W
Sbjct: 47 AAFLTKRTTRDGNTIKFEIWDTAGQERFAPLAPMYYRNAQAAVVVFDITNEHSFHKAEDW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR-----RCVEYSE 190
VKEL A +IVIAL NK DL + V E
Sbjct: 107 ---------------------VKELHEKAGNDIVIALVANKMDLLNVQGTILDEAVNEEE 145
Query: 191 GEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
+++ + GLL+ + SAKT N++EIF + +K+P
Sbjct: 146 VDSFCQREGLLYFKASAKTGENIHEIFQTVGEKIP 180
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K+V LGESAVGKSS+VLRFV F E +E TIG
Sbjct: 14 KVVFLGESAVGKSSIVLRFVSDDFTESREPTIGA 47
>gi|402889796|ref|XP_003908188.1| PREDICTED: ras-related protein Rab-17 isoform 2 [Papio anubis]
Length = 187
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 102/175 (58%), Gaps = 21/175 (12%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 32 AFFTKVVDVGTASLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 91
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ KEL P +++ L GNK DL + R V + EG+ +AE
Sbjct: 92 KDLE-----------------KELH---PEEVLVMLVGNKTDL-SEEREVTFQEGKEFAE 130
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
LLFMETSAK V+E+F +A++L +++ GQ + + + CC
Sbjct: 131 SQKLLFMETSAKLNYQVSEVFSAVAQELLQRDDREGQAPQGDALNEGPARQAKCC 185
>gi|384940854|gb|AFI34032.1| ras-related protein Rab-17 [Macaca mulatta]
Length = 212
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 104/178 (58%), Gaps = 24/178 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDVGTASLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ KEL P +++ L GNK DL + R V + EG+ +A+
Sbjct: 114 KDLE-----------------KELH---PEEVLVMLVGNKTDL-SEEREVTFQEGKEFAD 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GRRLVETAEAP-KTSNCC 251
LLFMETSAK V+E+F +A++L +++ GQ G V E P + CC
Sbjct: 153 SQKLLFMETSAKLNYQVSEVFSAVAQELLQRDDREGQAPQGDAAVALNEGPARQVKCC 210
>gi|321265069|ref|XP_003197251.1| GTPase [Cryptococcus gattii WM276]
gi|317463730|gb|ADV25464.1| GTPase, putative [Cryptococcus gattii WM276]
Length = 253
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 102/191 (53%), Gaps = 60/191 (31%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ L++ ++FEIWDTAGQER+H+LAPMYYRNAQAA++VYDIT +A
Sbjct: 44 IGAAFLTQKCRLENRIVKFEIWDTAGQERFHSLAPMYYRNAQAAVVVYDIT------KAA 97
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-------------- 179
S K AK+WVKELQR A NIVIAL GNK DL
Sbjct: 98 SLEK---------------AKAWVKELQRQANANIVIALVGNKLDLVSATPSTSVSSSSE 142
Query: 180 -------------------PTSR------RCVEYSEGEAYAEENGLLFMETSAKTAMNVN 214
P + R V +E EAYA+E GLLF E SAK NVN
Sbjct: 143 TPAEGEAEADAEAEDEEPSPAAAADDEDVRQVPTAEAEAYAKEAGLLFFEASAKAGTNVN 202
Query: 215 EIFVEIAKKLP 225
E+F EIAK +P
Sbjct: 203 ELFTEIAKTIP 213
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 29/44 (65%)
Query: 289 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
++ K Q KLVLLGE+AVGKSSLVLRF G F E TIG
Sbjct: 3 EEAPVKAVQVKLVLLGEAAVGKSSLVLRFTSGDFDENTSPTIGA 46
>gi|118375516|ref|XP_001020942.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89302709|gb|EAS00697.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777796|dbj|BAJ21294.1| Rab-family small GTPase Rab5B [Tetrahymena thermophila]
Length = 197
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 24/179 (13%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+FI + + D T +F+IWDTAGQE+Y +LAP+YYR+ AA+IVYDITN+ +F K
Sbjct: 39 LGASFIPKVLTRGDKTYKFQIWDTAGQEKYRSLAPLYYRDTHAALIVYDITNRASFDVLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
W V+EL+ P NI IA+ GNK DL R V+Y E +
Sbjct: 99 KW---------------------VQELREHGPANITIAVVGNKVDL-IDREDVKYDEAKQ 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN--NGQGGRRLVETAEAPKTSNC 250
YA E +F TSAK N+ +F++IA+K +K++N Q + + P+ C
Sbjct: 137 YANELNAIFQYTSAKENQNIESLFIQIAEKEEQKDINPTKPQSNKGFQNQVQRPQGGGC 195
>gi|58261772|ref|XP_568296.1| GTPase [Cryptococcus neoformans var. neoformans JEC21]
gi|134118345|ref|XP_772186.1| hypothetical protein CNBM1050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254794|gb|EAL17539.1| hypothetical protein CNBM1050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230469|gb|AAW46779.1| GTPase, putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 252
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 100/188 (53%), Gaps = 59/188 (31%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L++ ++FEIWDTAGQER+H+LAPMYYRNAQAA++VYD+T + +AK+W
Sbjct: 46 AAFLTQKCRLENRIVKFEIWDTAGQERFHSLAPMYYRNAQAAVVVYDVTKSASLEKAKAW 105
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
VK ELQR A NIVIAL GNK DL
Sbjct: 106 VK---------------------ELQRQANANIVIALVGNKLDLVSAAPSTSASSSSETP 144
Query: 180 ----------------PTSR------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIF 217
P + R V +E EAYA+E GLLF E SAK NVNE+F
Sbjct: 145 AEGEGEADAEAEEESSPAAAADDEDVRQVPTAEAEAYAKEAGLLFFEASAKAGTNVNELF 204
Query: 218 VEIAKKLP 225
EIAK +P
Sbjct: 205 TEIAKTIP 212
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 29/44 (65%)
Query: 289 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
++ K Q KLVLLGE+AVGKSSLVLRF G F E TIG
Sbjct: 3 EEAPVKAVQVKLVLLGEAAVGKSSLVLRFTSGDFDENTSPTIGA 46
>gi|405123574|gb|AFR98338.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 254
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 102/190 (53%), Gaps = 61/190 (32%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L++ ++FEIWDTAGQER+H+LAPMYYRNAQAA++VYDIT +A S
Sbjct: 46 AAFLTQKCRLENRIVKFEIWDTAGQERFHSLAPMYYRNAQAAVVVYDIT------KAASL 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
K AK+WVKELQR A NIVIAL GNK DL
Sbjct: 100 EK---------------AKAWVKELQRQANANIVIALVGNKLDLVSAAPSTSASSSSETP 144
Query: 180 ------------------PTSR------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNE 215
P + R V +E EAYA+E GLLF E SAK NVNE
Sbjct: 145 AEGDDEADAEAQEEEESSPAAAADDEDVRQVPTAEAEAYAKEAGLLFFEASAKAGTNVNE 204
Query: 216 IFVEIAKKLP 225
+F EIAK +P
Sbjct: 205 LFTEIAKTIP 214
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 29/44 (65%)
Query: 289 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
++ K Q KLVLLGE+AVGKSSLVLRF G F E TIG
Sbjct: 3 EEAPVKAVQVKLVLLGEAAVGKSSLVLRFTSGDFDENTSPTIGA 46
>gi|356983933|gb|AET43935.1| Rab5, partial [Reishia clavigera]
Length = 81
Score = 126 bits (316), Expect = 2e-26, Method: Composition-based stats.
Identities = 63/80 (78%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Query: 149 TFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAK 208
TFGRAK+WVKELQR A PNIVIALAGNKADL ++R VE+ E +AYAEEN LLFMETSAK
Sbjct: 1 TFGRAKTWVKELQRQASPNIVIALAGNKADL-ANKRMVEFEEAQAYAEENSLLFMETSAK 59
Query: 209 TAMNVNEIFVEIAKKLPKKE 228
TAMNVN+IF+ IAKKLPK E
Sbjct: 60 TAMNVNDIFLAIAKKLPKNE 79
>gi|332256839|ref|XP_003277525.1| PREDICTED: ras-related protein Rab-17 isoform 1 [Nomascus
leucogenys]
Length = 212
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 104/178 (58%), Gaps = 24/178 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ KEL P +++ L GNK DL + R V + EG+ +A+
Sbjct: 114 KDLE-----------------KELH---PGEVLVMLVGNKTDL-SEEREVTFQEGKEFAD 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GRRLVETAEAP-KTSNCC 251
LLFMETSAK V E+F +A++L +++ GQ G V E P + + CC
Sbjct: 153 SQRLLFMETSAKLNQQVREVFNSVAQELLQRDDGEGQAPRGDAAVALNEGPARQAKCC 210
>gi|168021891|ref|XP_001763474.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
gi|162685267|gb|EDQ71663.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
Length = 208
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 103/188 (54%), Gaps = 33/188 (17%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+ + +D + IWDTAGQER+H L P+YYR+A AA++VYD+ ++D+F R +SW
Sbjct: 43 ASFLTKRLTVDGQVVSLCIWDTAGQERFHALGPIYYRDADAALLVYDLLDKDSFDRVQSW 102
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+ EL++MA NIV+++AGNK+D+ S + E YA
Sbjct: 103 VR---------------------ELKKMASKNIVLSIAGNKSDMAKSLHG-NMQDAEMYA 140
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG-----QGGRRLV------ETAEA 244
E G TSAK + E F++IA+++ ++ G G RR ETA
Sbjct: 141 ESIGATHFVTSAKLNAGIEETFMDIARRVMQQRAAEGIDNPASGPRRKSVVIADKETANT 200
Query: 245 PKTSNCCN 252
P TS CC+
Sbjct: 201 PPTSRCCS 208
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 330
Q KLV+LG+ VGK+SL LR+V F E Q +TI
Sbjct: 8 QIKLVILGDGRVGKTSLALRYVHNVFSEKQMATI 41
>gi|196003396|ref|XP_002111565.1| hypothetical protein TRIADDRAFT_50216 [Trichoplax adhaerens]
gi|190585464|gb|EDV25532.1| hypothetical protein TRIADDRAFT_50216 [Trichoplax adhaerens]
Length = 163
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 93/146 (63%), Gaps = 22/146 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+++T+ +++ + +++IWDTAGQE+Y LAPMYYR A AAI+V+DIT +++F K W
Sbjct: 40 ASFMSKTIEVNEQSYKYQIWDTAGQEKYRGLAPMYYRGAAAAIVVFDITREESFHTLKDW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKELQ ++ PPN+V+A+AGNK+DL R V + +A
Sbjct: 100 VKELQ---------------------QLGPPNLVMAIAGNKSDLDEMRE-VSSHDARTFA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIA 221
+ LF ETSA TA NV E+FVEI+
Sbjct: 138 DSVDALFAETSALTAKNVLELFVEIS 163
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS 336
+ KL LLG++ VGKSSLVLRFV F+ ESTIG S
Sbjct: 5 EIKLCLLGDAGVGKSSLVLRFVCDTFNACSESTIGASFMS 44
>gi|395859794|ref|XP_003802216.1| PREDICTED: ras-related protein Rab-2A isoform 2 [Otolemur
garnettii]
Length = 188
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 106/197 (53%), Gaps = 36/197 (18%)
Query: 70 YPYLFSAAFITQT--------VCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVY 121
Y YLF I T + +D I+ +IWDTAGQE + ++ YYR A A++VY
Sbjct: 3 YAYLFKYIIIGDTGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 62
Query: 122 DITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT 181
DIT +D TF +W+++ ++ + N+VI L GNK+DL
Sbjct: 63 DITRRD---------------------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE- 100
Query: 182 SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGG 235
SRR V+ EGEA+A E+GL+FMETSAKTA NV E F+ AK++ +K ++NN G
Sbjct: 101 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANG 160
Query: 236 RRLVETAEAPKTSNCCN 252
++ A ++ CN
Sbjct: 161 IKIGPQHAATNATHACN 177
>gi|448083219|ref|XP_004195336.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
gi|359376758|emb|CCE87340.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
Length = 223
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 103/195 (52%), Gaps = 41/195 (21%)
Query: 76 AAFITQTVCLDD--VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ+V L + T++FEIWDTAGQERY +LAPMYYRNA AA+ VYDIT++ +F RA+
Sbjct: 51 AAFLTQSVKLPEKSATVKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFNRAQ 110
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
W+KE L++ AP NI I L GNK D+ R V E +
Sbjct: 111 EWIKE---------------------LKKQAPENITICLVGNKTDMQEERE-VNQEEVDE 148
Query: 194 YA-----EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEV------NNGQGGRRL--VE 240
Y E L+ E SAK+ V EIF IA LP +EV N G RR V+
Sbjct: 149 YITQLQNEGTTLISGECSAKSGDGVLEIFTNIANALPVEEVINNSPRNRSLGSRRSAGVD 208
Query: 241 TAEAPK----TSNCC 251
AP + CC
Sbjct: 209 LGRAPSQNQANTGCC 223
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 13 RFAQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGA 51
>gi|260949137|ref|XP_002618865.1| hypothetical protein CLUG_00024 [Clavispora lusitaniae ATCC 42720]
gi|238846437|gb|EEQ35901.1| hypothetical protein CLUG_00024 [Clavispora lusitaniae ATCC 42720]
Length = 221
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 96/161 (59%), Gaps = 32/161 (19%)
Query: 76 AAFITQTVCLDDV--TIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQT+ L + T++FEIWDTAGQERY +LAPMYYRNA AA+ VYDIT++ +F +A+
Sbjct: 52 AAFLTQTINLPEANTTVKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFNKAQ 111
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC-----VEY 188
W ++EL++ AP IV+AL GNKADL R VEY
Sbjct: 112 DW---------------------IEELKKQAPEGIVVALVGNKADLSHEREVDESEIVEY 150
Query: 189 SE--GEAYAEENG--LLFMETSAKTAMNVNEIFVEIAKKLP 225
E + A E G ++ ME SAK+ V E+F IA+ LP
Sbjct: 151 IERLKQESAAEGGREIIHMECSAKSGDGVLEVFDAIARALP 191
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRL 350
++ + Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG +F T N
Sbjct: 11 SETRFVQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGA--------AFLTQTINLP 62
Query: 351 NNNVPITF-VW 360
N + F +W
Sbjct: 63 EANTTVKFEIW 73
>gi|125551885|gb|EAY97594.1| hypothetical protein OsI_19520 [Oryza sativa Indica Group]
Length = 210
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 97/159 (61%), Gaps = 22/159 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+++T+ + ++ V I IWDTAGQE++H L P+YYR+A AA++VYDIT+ DTF R W
Sbjct: 47 ASYLTKRLVVEGVPITLSIWDTAGQEKFHALGPIYYRDADAALLVYDITDNDTFLRVTKW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKEL++MA N D IV+A+A NK+DL S+ ++ +E +YA
Sbjct: 107 VKELKQMA--NKD-------------------IVMAIAANKSDLVRSKH-IDTNEAASYA 144
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
E G TSAK +++IF +IAK+L +K N+ G
Sbjct: 145 ESIGATLFVTSAKAGTGIDDIFSDIAKRLLEKRKNSSDG 183
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 11/66 (16%)
Query: 296 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVP 355
+KLVLLG+ VGK+SLVLR+V F + QE+T+ Q+S+ TK + VP
Sbjct: 11 VSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATV----QASYL------TKRLVVEGVP 60
Query: 356 ITF-VW 360
IT +W
Sbjct: 61 ITLSIW 66
>gi|410897487|ref|XP_003962230.1| PREDICTED: ras-related protein Rab-17-like [Takifugu rubripes]
Length = 223
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 102/169 (60%), Gaps = 24/169 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
A++T + L DV++RFEIWDTAGQE+YH++ P+YYR A AA++VYDI+ ++TF R + W+
Sbjct: 60 AYMTHMIHLRDVSLRFEIWDTAGQEKYHSVTPLYYRGAHAALLVYDISKRETFYRVQLWL 119
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
+EL++ P + V+ L GNKADL +R+ E EG + A
Sbjct: 120 QELEK--------------------HYIPGSTVMWLIGNKADLGHARQVSE-QEGHSLAA 158
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
+ GL F+ETSA + +V+E+ ++A ++ + V QGG L E E P
Sbjct: 159 DRGLYFIETSALSGDHVDELLQDVAHRVYEC-VGGQQGG--LSEWEEKP 204
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQF 322
+ + K+VLLG S VGKSSL LRFVR +F
Sbjct: 22 RTLRVKMVLLGGSGVGKSSLALRFVRSEF 50
>gi|308805074|ref|XP_003079849.1| GTPase Rab5/YPT51 and related small G protein superfamily GTPases
(ISS) [Ostreococcus tauri]
gi|116058306|emb|CAL53495.1| GTPase Rab5/YPT51 and related small G protein superfamily GTPases
(ISS) [Ostreococcus tauri]
Length = 221
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 92/153 (60%), Gaps = 23/153 (15%)
Query: 76 AAFITQTVCLD-DVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
A+++T+TV L+ D +WDTAGQER+H L P+YYR+A AAI+VYDIT+ D+F RAK+
Sbjct: 54 ASYLTKTVRLESDARATLNVWDTAGQERFHALGPIYYRDADAAIVVYDITDADSFERAKA 113
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
WVKEL+R+A I IA+ NK+DL +RR V +GEAY
Sbjct: 114 WVKELRRIAGAEIS---------------------IAVCANKSDLERARR-VSNDDGEAY 151
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
A+ G F TSAKT V + F+ +A+ L K
Sbjct: 152 AKGIGASFHSTSAKTDKGVEQAFMSVARALDMK 184
>gi|297853616|ref|XP_002894689.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340531|gb|EFH70948.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 147
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 78/119 (65%), Gaps = 21/119 (17%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIV+D+TNQ
Sbjct: 36 VEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQ 95
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+F RAK WV+ELQ A N PN+V+ALAGNK+DL +R+
Sbjct: 96 ASFERAKKWVQELQ--AQDN-------------------PNMVMALAGNKSDLLDARKV 133
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 300 LVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
LVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGA 45
>gi|297841033|ref|XP_002888398.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334239|gb|EFH64657.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 144
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 79/120 (65%), Gaps = 21/120 (17%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAIIV+D+TNQ
Sbjct: 36 VEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQ 95
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
+F RAK WV+ELQ A N PN+V+ALAGNK+DL +R+ +
Sbjct: 96 ASFERAKKWVQELQ--AQGN-------------------PNMVMALAGNKSDLLDARKFI 134
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 29/38 (76%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
K KLVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIG 44
>gi|115463295|ref|NP_001055247.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|54291745|gb|AAV32114.1| unknown protein [Oryza sativa Japonica Group]
gi|113578798|dbj|BAF17161.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|215767010|dbj|BAG99238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631179|gb|EEE63311.1| hypothetical protein OsJ_18122 [Oryza sativa Japonica Group]
Length = 212
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 96/159 (60%), Gaps = 22/159 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+++T+ + ++ V I IWDTAGQE++H L P+YYR+A AA++VYDIT+ DTF R W
Sbjct: 49 ASYLTKRLVVEGVPITLSIWDTAGQEKFHALGPIYYRDADAALLVYDITDNDTFLRVTKW 108
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL++MA +IV+A+A NK+DL S+ ++ +E +YA
Sbjct: 109 V---------------------KELKQMANKDIVMAIAANKSDLVRSKH-IDTNEAASYA 146
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
E G TSAK +++IF +IAK+L ++ N+ G
Sbjct: 147 ESIGATLFVTSAKAGTGIDDIFSDIAKRLLERRKNSSDG 185
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 11/66 (16%)
Query: 296 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVP 355
+KLVLLG+ VGK+SLVLR+V F + QE+T+ Q+S+ TK + VP
Sbjct: 13 VSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATV----QASYL------TKRLVVEGVP 62
Query: 356 ITF-VW 360
IT +W
Sbjct: 63 ITLSIW 68
>gi|323354139|gb|EGA85985.1| Ypt52p [Saccharomyces cerevisiae VL3]
Length = 206
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 107/215 (49%), Gaps = 62/215 (28%)
Query: 78 FITQTVCL--------DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
F++Q++ + DV I+FEIWDTAGQERY +LAPMYYRNA AA++VYDIT +D+
Sbjct: 12 FLSQSITIHPNDGNETKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSL 71
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------- 179
+A++WV EL+ ++ ++VI L GNK DL
Sbjct: 72 QKARNWVDELKN--------------------KVGDDDLVIYLLGNKVDLCQETPSTETS 111
Query: 180 PTSR---------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKK---LPKK 227
P S R + E + YA+E GLLF E SAKT V EIF +I +K L K
Sbjct: 112 PDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKEIFQDIGEKLYDLKKD 171
Query: 228 EV-----------NNGQGGRRLVETAEAPKTSNCC 251
E+ NNGQ L + TS CC
Sbjct: 172 EILSKQNRQIGGGNNGQVDINLQRPSTNDPTS-CC 205
>gi|440791438|gb|ELR12676.1| Rasrelated protein Rab5, putative [Acanthamoeba castellanii str.
Neff]
Length = 218
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 101/186 (54%), Gaps = 32/186 (17%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+ + + D I+ IWDTAGQER+ +LAPMYYR A AA+I +DIT +++F
Sbjct: 54 ASFLTKVLLISDCKIKLRIWDTAGQERFRSLAPMYYRGACAAVIAFDITREESF------ 107
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
K++Q WVKELQ I++ + GNKADL R+ V + E YA
Sbjct: 108 -KKMQ--------------DWVKELQINLSEEIILVVVGNKADLEKFRK-VSKATAEDYA 151
Query: 196 EENGLL-FMETSAKTAMNVNEIFVEIAKKLPKKEV---------NNGQGGRRLVETAEAP 245
G L ++E SAKT + EIF+ IA KL +K + + GGRRLV+ E
Sbjct: 152 RNIGALGYVEASAKTGDGIEEIFMNIAHKLNEKRLASPDGMDSSRSPSGGRRLVDDGEGD 211
Query: 246 KTSNCC 251
CC
Sbjct: 212 TGRRCC 217
>gi|71755237|ref|XP_828533.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70833919|gb|EAN79421.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|261334411|emb|CBH17405.1| small GTP-binding protein Rab5b, putative [Trypanosoma brucei
gambiense DAL972]
Length = 203
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 94/178 (52%), Gaps = 24/178 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+ + D + F+IWDTAGQERY +LA MYYR A AA++VY+I + +TF RAK W
Sbjct: 47 ASFLRYVCTVGDTAVNFDIWDTAGQERYKSLASMYYRGAAAALVVYEIPSWETFERAKHW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+EL +P I + L GNK+DL + CV E YA
Sbjct: 107 VRELATNSPETI----------------------VILVGNKSDLRGTSGCVSSEEAATYA 144
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG--QGGRRLVETAEAPKTSNCC 251
E LLF E SAK V+E+F++IA++L NN GG + ++S CC
Sbjct: 145 RELNLLFSEASAKDGSGVSEVFMQIAQRLVASNNNNTVHSGGVLGGQPNSTRRSSGCC 202
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+YK+VLLG+S VGKSSLV R + ++ + Q ST+G
Sbjct: 12 KYKIVLLGDSGVGKSSLVQRLAKNEWCDNQNSTVG 46
>gi|389639440|ref|XP_003717353.1| vacuolar protein sorting-associated protein 21 [Magnaporthe oryzae
70-15]
gi|351643172|gb|EHA51034.1| vacuolar protein sorting-associated protein 21 [Magnaporthe oryzae
70-15]
gi|440465364|gb|ELQ34687.1| vacuolar protein sorting-associated protein 21 [Magnaporthe oryzae
Y34]
gi|440490989|gb|ELQ70478.1| vacuolar protein sorting-associated protein 21 [Magnaporthe oryzae
P131]
Length = 238
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 94/174 (54%), Gaps = 44/174 (25%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L TI+FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T + +AK W
Sbjct: 46 AAFLTQKCNLPARTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHW 105
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT-------------- 181
V E LQR A P IVIAL GNK DL +
Sbjct: 106 VAE---------------------LQRQASPGIVIALVGNKLDLTSDGGDASGGGDDDGD 144
Query: 182 ---------SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
R + E +AYAEE GLLF ETSAKT NV E+F IA +P+
Sbjct: 145 AEGAGDDSGDARKIPTEEAKAYAEEEGLLFFETSAKTGFNVTEVFTAIANAIPE 198
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 46
>gi|119622000|gb|EAX01595.1| RAB31, member RAS oncogene family, isoform CRA_a [Homo sapiens]
Length = 172
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 90/148 (60%), Gaps = 22/148 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K W
Sbjct: 41 ASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKW 100
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL+ P NIV+A+AGNK DL R V + + YA
Sbjct: 101 V---------------------KELKEHGPENIVMAIAGNKCDLSDIRE-VPLKDAKEYA 138
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKK 223
E G + +ETSAK A+N+ E+F I+++
Sbjct: 139 ESIGAIVVETSAKNAINIEELFQGISEQ 166
>gi|390360094|ref|XP_003729629.1| PREDICTED: ras-related protein Rab-21-like [Strongylocentrotus
purpuratus]
Length = 207
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 102/187 (54%), Gaps = 31/187 (16%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+ + + + + +IWDTAGQER+H L P+YYR++ AI+VYDIT++D+F + K
Sbjct: 43 LQASFLNKKLNIGGKRVNLDIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFTKVK 102
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
SWVKEL++M +I + +AGNK DL R V ++ EA
Sbjct: 103 SWVKELKKMLGNDIS---------------------LCIAGNKIDLEKQRN-VSVADAEA 140
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE-VNNGQGGRR--------LVETAEA 244
YA G TSAK + E+F++++K++ + +++G R +VE AE
Sbjct: 141 YAASVGAKHFHTSAKLNKGIEEMFLDLSKRMLESTFLDDGASSSRASKHKSVTIVEDAEE 200
Query: 245 PKTSNCC 251
PK+ CC
Sbjct: 201 PKSGGCC 207
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 330
+K+VLLGE VGK+SLVLR+V +F++ +T+
Sbjct: 11 FKVVLLGEGCVGKTSLVLRYVENKFNDKHITTL 43
>gi|167518440|ref|XP_001743560.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777522|gb|EDQ91138.1| predicted protein [Monosiga brevicollis MX1]
Length = 180
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 90/146 (61%), Gaps = 21/146 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+ + LD+ ++ IWDTAGQE+Y LAPMYYR+A+AA+IVYDIT TF +SW
Sbjct: 40 ASFLTKMITLDNRELKLSIWDTAGQEKYRGLAPMYYRDAEAAVIVYDITKASTFQNVRSW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V EL + P QR+A +A+AGNKADL R+ V Y + YA
Sbjct: 100 VSELTAINPG---------------QRLA-----LAIAGNKADLDEQRQ-VAYQDASKYA 138
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIA 221
E G +F ETSA +NV+E+F ++A
Sbjct: 139 ESVGAIFFETSAIQGINVHELFDQLA 164
>gi|297849916|ref|XP_002892839.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338681|gb|EFH69098.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 144
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 78/114 (68%), Gaps = 21/114 (18%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR AAIIV+D+TNQ +F RAK W
Sbjct: 45 AAFFSQTLAINDATVKFEIWDTAGQERYHSLAPMYYRGVAAAIIVFDVTNQASFERAKKW 104
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
V+ELQ A N PN+V+ALAGNK+DL +R+ + ++
Sbjct: 105 VQELQ--AQGN-------------------PNMVMALAGNKSDLLDARKFIGFT 137
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 28/33 (84%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KLVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIG 44
>gi|320168533|gb|EFW45432.1| GTP-binding protein rab11 [Capsaspora owczarzaki ATCC 30864]
Length = 243
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 95/159 (59%), Gaps = 22/159 (13%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+ + +D +R +IWDTAGQER+ ++APMYYR A AA++VYDIT++ TF KSW
Sbjct: 64 ASFMTRKMTVDRCQVRMQIWDTAGQERFRSMAPMYYRGANAALLVYDITDEQTFDDIKSW 123
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VKELQ N+D+ +IV+ L GNK+D+ + R+ V YA
Sbjct: 124 VKELQH----NVDS-----------------DIVLVLVGNKSDMASQRK-VSGETAAIYA 161
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
EE LF ETSAK +++ F+ A+++ K + +G
Sbjct: 162 EEINALFFETSAKADSGISDAFLHAAREMIKLRTGSDEG 200
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+ + K+V+LG VGK+SLVLR+V+G + STIG
Sbjct: 25 GRALEAKVVILGSQGVGKTSLVLRYVQGTYAADITSTIG 63
>gi|194211471|ref|XP_001916000.1| PREDICTED: ras-related protein Rab-17-like [Equus caballus]
Length = 218
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 25/179 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V L +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F + W+
Sbjct: 59 AFFTKVVDLGAASLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFDMVQQWL 118
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L++ P IV+ L GNK DL R V + EG+ +AE
Sbjct: 119 KDLEK--------------------EFHPGEIVVMLVGNKTDLGEERE-VTFEEGKEFAE 157
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKK-LPKKEVNNGQGGRRLVETA--EAPK-TSNCC 251
LLFMETSA+ V E+F +A++ L ++E GQ RR A E P + CC
Sbjct: 158 SKRLLFMETSARLNHQVTEVFSAVARELLQREERKEGQTQRRDARLALNERPAGQAKCC 216
>gi|11967981|ref|NP_071894.1| ras-related protein Rab-17 [Homo sapiens]
gi|37999892|sp|Q9H0T7.2|RAB17_HUMAN RecName: Full=Ras-related protein Rab-17
gi|10434082|dbj|BAB14121.1| unnamed protein product [Homo sapiens]
gi|29791507|gb|AAH50426.1| RAB17, member RAS oncogene family [Homo sapiens]
gi|62988659|gb|AAY24047.1| unknown [Homo sapiens]
gi|119591524|gb|EAW71118.1| RAB17, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119591526|gb|EAW71120.1| RAB17, member RAS oncogene family, isoform CRA_a [Homo sapiens]
Length = 212
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 102/178 (57%), Gaps = 24/178 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ + + P +++ L GNK DL R V + EG+ +A+
Sbjct: 114 KDLE--------------------EELHPGEVLVMLVGNKTDLSQERE-VTFQEGKEFAD 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GRRLVETAEAP-KTSNCC 251
LLFMETSAK V+E+F +A++L ++ GQ G V + P + + CC
Sbjct: 153 SQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQALRGDAAVALNKGPARQAKCC 210
>gi|48146681|emb|CAG33563.1| RAB17 [Homo sapiens]
Length = 212
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 102/178 (57%), Gaps = 24/178 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ + + P +++ L GNK DL R V + EG+ +A+
Sbjct: 114 KDLE--------------------EELHPGEVLVMLVGNKTDLSQERE-VTFQEGKEFAD 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GRRLVETAEAP-KTSNCC 251
LLFMETSAK V+E+F +A++L ++ GQ G V + P + + CC
Sbjct: 153 SQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQALRGDAAVALNKGPARQAKCC 210
>gi|358059194|dbj|GAA95133.1| hypothetical protein E5Q_01788 [Mixia osmundae IAM 14324]
Length = 261
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 105/196 (53%), Gaps = 59/196 (30%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ L+D I+FE+WDTAGQER+H+LAPMYYRNA AA++VYD+T+ + +AKSW
Sbjct: 47 AAFLTQKCRLEDKVIKFEVWDTAGQERFHSLAPMYYRNAAAAVVVYDVTSAVSLDKAKSW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL---------------- 179
V ELQR A PNIVIA GNK DL
Sbjct: 107 VA---------------------ELQRQATPNIVIAFVGNKIDLVSGSSSESEVPAAAAT 145
Query: 180 --------------PTS--------RRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIF 217
PTS RR V E EAYA+E GLLF ETSAKT V E+F
Sbjct: 146 ETEGENAEATDDVVPTSTASASSADRRQVPREEAEAYAKEAGLLFFETSAKTGEGVVEVF 205
Query: 218 VEIAKKLPKKEVNNGQ 233
EIAKK+P ++ G+
Sbjct: 206 TEIAKKIPLDDLLPGR 221
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 33/54 (61%), Gaps = 8/54 (14%)
Query: 279 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
G +QRP Q KLVLLG +AVGKSS+VLRFV+ F E +E TIG
Sbjct: 2 AEAGAVQRP--------VQVKLVLLGAAAVGKSSVVLRFVQNDFQENKEPTIGA 47
>gi|71033037|ref|XP_766160.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353117|gb|EAN33877.1| GTP-binding protein rab5, putative [Theileria parva]
Length = 270
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 80/115 (69%), Gaps = 23/115 (20%)
Query: 67 VVFYPYLFS--AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDIT 124
V+ Y +L + AAF+TQTV LDD ++FEIWDTAGQERY TLAPMYYR + AAIIVYDIT
Sbjct: 73 VINYDFLITILAAFMTQTVKLDDCNVKFEIWDTAGQERYRTLAPMYYRGSAAAIIVYDIT 132
Query: 125 NQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL 179
+D+F +AKSW+KEL KS V+ PNI++ALAGNKADL
Sbjct: 133 LKDSFDQAKSWIKEL--------------KSHVE-------PNIILALAGNKADL 166
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 272 SNNSNSNGRGGRIQRPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 330
S + NG+ P+D +++ + Q+KLV+LG+++VGKS LV RFV+ F E+QESTI
Sbjct: 11 SPSEGGNGKEATNSSPSDSKSKNPVYQFKLVILGDASVGKSCLVGRFVKNTFMEFQESTI 70
Query: 331 G 331
G
Sbjct: 71 G 71
>gi|260797885|ref|XP_002593931.1| hypothetical protein BRAFLDRAFT_283834 [Branchiostoma floridae]
gi|229279163|gb|EEN49942.1| hypothetical protein BRAFLDRAFT_283834 [Branchiostoma floridae]
Length = 164
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 22/147 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+++T+ ++D + +F+IWDTAGQE+Y LAPMYYR A AAI+VYDIT + +F K W
Sbjct: 40 ASFMSKTLVVNDTSYKFQIWDTAGQEKYRGLAPMYYRGAAAAIVVYDITREGSFQTLKDW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
++EL++ NIV+A+AGNK D+ R V YA
Sbjct: 100 ---------------------IRELKQYGADNIVLAIAGNKCDMEDLRE-VSTRMASDYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAK 222
EEN +F+ETSAKTA NV ++F I++
Sbjct: 138 EENNAIFLETSAKTAHNVAQMFTLISE 164
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 26/40 (65%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS 336
+ KL LLG+S VGKSSLV+RFV F ESTIG S
Sbjct: 5 EIKLCLLGDSGVGKSSLVVRFVTDTFTANLESTIGASFMS 44
>gi|401624887|gb|EJS42926.1| ypt52p [Saccharomyces arboricola H-6]
Length = 236
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 95/178 (53%), Gaps = 49/178 (27%)
Query: 76 AAFITQTVCL----------DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
AAF++Q++ + DV I+FEIWDTAGQERY +LAPMYYRNA AA++VYDIT
Sbjct: 38 AAFLSQSITIHPNDGNEANPKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQ 97
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL------ 179
+D+ +A++WV EL+ ++ ++VI L GNK D+
Sbjct: 98 EDSLQKARNWVDELKN--------------------KVGDDDLVIYLLGNKVDICQETPV 137
Query: 180 ----PTSR---------RCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
P S R + E YA++ GLLF E SAKT + EIF +I +KL
Sbjct: 138 VETSPESNEAGNDEQKVRAISTEEAGQYAQDQGLLFREVSAKTGEGIKEIFQDIGEKL 195
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLN-NN 353
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG S SI+ N N +
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAF-LSQSITIHPNDGNEANPKD 59
Query: 354 VPITF-VW 360
V I F +W
Sbjct: 60 VVIKFEIW 67
>gi|354548327|emb|CCE45063.1| hypothetical protein CPAR2_700670 [Candida parapsilosis]
Length = 231
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 29/161 (18%)
Query: 76 AAFITQTVCLDDV--TIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ++ + + TI+FEIWDTAGQERY +LAPMYYRNA AA+ VYDIT++++F +A+
Sbjct: 54 AAFLTQSITIPETQTTIKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRNSFAKAQ 113
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
W+K EL++ AP +IV+AL GNK DL +R V+ E +
Sbjct: 114 DWIK---------------------ELKKQAPSDIVVALVGNKLDLEDNRE-VQSEEVDE 151
Query: 194 YAEE---NG--LLFMETSAKTAMNVNEIFVEIAKKLPKKEV 229
Y E +G ++ E SAK V E+F I + LP +EV
Sbjct: 152 YISELQTDGFKIIKAECSAKNGDGVVELFEAIGRALPVEEV 192
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 285 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
Q + Q + Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 7 QGDSSSAQQRFVQFKLVLLGESAVGKSSIVHRFVKNTFDDARESTIGA 54
>gi|6679585|ref|NP_033024.1| ras-related protein Rab-17 [Mus musculus]
gi|229577224|ref|NP_001153197.2| ras-related protein Rab-17 [Mus musculus]
gi|464564|sp|P35292.1|RAB17_MOUSE RecName: Full=Ras-related protein Rab-17
gi|297157|emb|CAA50071.1| rab17 [Mus musculus]
gi|26344383|dbj|BAC35842.1| unnamed protein product [Mus musculus]
gi|29835274|gb|AAH51071.1| RAB17, member RAS oncogene family [Mus musculus]
gi|112292991|dbj|BAF02873.1| Rab17 [Mus musculus]
Length = 214
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 102/180 (56%), Gaps = 26/180 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ + L +++ EIWDTAGQE+Y ++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVLDLGSSSLKLEIWDTAGQEKYQSVCHLYFRGANAALLVYDITRKDSFHKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
++L+ KE Q P +V+ L GNK DL R V + EG+ +AE
Sbjct: 114 EDLE-----------------KEFQ---PGEVVVMLVGNKTDLGEERE-VTFQEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG----QGGRRLVETAEAP-KTSNCC 251
LLFMETSAK V+EIF +A++L ++ + G Q G + E P + CC
Sbjct: 153 SKSLLFMETSAKLNYQVSEIFNTVAQELLQRAGDTGSSRPQEGEAVALNQEPPIRQRQCC 212
>gi|395859792|ref|XP_003802215.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Otolemur
garnettii]
Length = 212
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 102/181 (56%), Gaps = 28/181 (15%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 92
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF +W+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 93 -----------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRLVETAEAPKTSNCC 251
+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++ A ++ C
Sbjct: 141 HGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNATHAC 200
Query: 252 N 252
N
Sbjct: 201 N 201
>gi|224046076|ref|XP_002190163.1| PREDICTED: ras-related protein Rab-31 [Taeniopygia guttata]
Length = 195
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 101/184 (54%), Gaps = 33/184 (17%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+T+TV + +F IWDTAGQER+H+LAPMYYR + AA+IVYDIT QD+F K
Sbjct: 39 IGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLK 98
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
W VKEL+ P N + +AGNK DL R V + +
Sbjct: 99 KW---------------------VKELKEHGPENNAMPIAGNKCDLSDIRE-VPMKDAKE 136
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE----VNNG--QGGRRLVETAEAPKT 247
YAE G + +ETSAK A+N+ E+F I++++P + NNG + GR+ +T
Sbjct: 137 YAESIGAIVVETSAKNAVNIEELFQGISQQIPPLDPHEISNNGAIKLGRQTSQTGR---- 192
Query: 248 SNCC 251
CC
Sbjct: 193 -RCC 195
>gi|15341954|gb|AAH13170.1| RAB17, member RAS oncogene family [Mus musculus]
Length = 214
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 102/180 (56%), Gaps = 26/180 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ + L +++ EIWDTAGQE+Y ++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVLDLGSSSLKLEIWDTAGQEKYQSVCHLYFRGANAALLVYDITRKDSFHKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
++L+ KE Q P +V+ L GNK DL R V + EG+ +AE
Sbjct: 114 EDLE-----------------KEFQ---PGEVVVMLVGNKTDLGEERE-VTFQEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG----QGGRRLVETAEAP-KTSNCC 251
LLFMETSAK V+EIF +A++L ++ + G Q G + E P + CC
Sbjct: 153 SKSLLFMETSAKLNYQVSEIFNTVAQELLQRAGDTGSSRPQEGEAVALNQEPPIRQRQCC 212
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 108/192 (56%), Gaps = 37/192 (19%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ L+ I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 43 FTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 102
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +FG ++W++ +++ A +++ L GNK DLP ++
Sbjct: 103 EKSFGNIRNWIRNIEQHATESVNKM---------------------LIGNKCDLP-EKKV 140
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRLV 239
V+ S G+A A+E G+ F+ETSAK ++NV E F+ +AK + K+ E NN G +L
Sbjct: 141 VDSSRGKALADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPNEPNNQTGNAQLS 200
Query: 240 ETAEAPKTSNCC 251
+TA A K NCC
Sbjct: 201 DTAPA-KQKNCC 211
>gi|3309109|gb|AAC78731.1| Trab5B [Trypanosoma brucei]
Length = 203
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 92/176 (52%), Gaps = 24/176 (13%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F+ + D + F+IWDTAGQERY +LA MYYR A AA++VY+I + +TF RAK WV+
Sbjct: 49 FLRYVCTVGDTAVNFDIWDTAGQERYKSLASMYYRGAAAALVVYEIPSWETFERAKHWVR 108
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
EL +P I + L GNK+DL + CV E YA E
Sbjct: 109 ELATNSPETI----------------------VILVGNKSDLRGTSGCVSSEEAATYARE 146
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG--QGGRRLVETAEAPKTSNCC 251
LLF E SAK V+E+F++IA++L NN GG + ++S CC
Sbjct: 147 LNLLFSEASAKDGSGVSEVFMQIAQRLVASNNNNTVHSGGVLGGQPNSTRRSSGCC 202
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQEST 329
+YK+VLLG+S VGKSSLV R + ++ + Q ST
Sbjct: 12 KYKIVLLGDSGVGKSSLVQRLAKNEWCDNQNST 44
>gi|395502996|ref|XP_003755859.1| PREDICTED: ras-related protein Rab-2B isoform 2 [Sarcophilus
harrisii]
Length = 192
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 36/183 (19%)
Query: 70 YPYLFSAAFITQT--------VCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVY 121
Y YLF I T V +D I+ +IWDTAGQE + ++ YYR A A++VY
Sbjct: 3 YAYLFKYIIIGDTGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 62
Query: 122 DITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT 181
DIT ++T F SW+++ ++ + N+VI L GNK+DL
Sbjct: 63 DITRRET---------------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE- 100
Query: 182 SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGG 235
SRR V+ EGEA+A E+GL+FMETSAKTA NV E F+ AK++ +K +VNN G
Sbjct: 101 SRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYRKIQQGLFDVNNEANG 160
Query: 236 RRL 238
++
Sbjct: 161 IKI 163
>gi|149239626|ref|XP_001525689.1| GTP-binding protein ypt5 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451182|gb|EDK45438.1| GTP-binding protein ypt5 [Lodderomyces elongisporus NRRL YB-4239]
Length = 234
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 94/171 (54%), Gaps = 32/171 (18%)
Query: 76 AAFITQTVCL--DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ++ + + T++FEIWDTAGQERY +LAPMYYRNA AA+ VYDIT+ +F +A+
Sbjct: 53 AAFLTQSITIPETETTVKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSSSSFTKAQ 112
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
W + EL++ AP IVIAL GNK DL R V E E
Sbjct: 113 DW---------------------ISELRKQAPEGIVIALVGNKTDLEEERE-VNQDEVEE 150
Query: 194 Y--------AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR 236
Y A E ++ E SAK+ V EIF +IA+ LP EV R
Sbjct: 151 YVTGLLNGGAPEAKIITAECSAKSGDGVIEIFDKIARALPVDEVIEANANR 201
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 284 IQRPNDQT-QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
IQ N QT + Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 4 IQSQNQQTPNPRFAQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGA 53
>gi|170592655|ref|XP_001901080.1| Ras-related protein Rab-2 [Brugia malayi]
gi|158591147|gb|EDP29760.1| Ras-related protein Rab-2, putative [Brugia malayi]
Length = 181
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 98/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +DT
Sbjct: 12 FGARMITIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDT--------- 62
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL +RR V+ EGEA+A E
Sbjct: 63 ------------FNHLASWLEDARQHSNSNMVIMLIGNKSDLE-ARREVKKEEGEAFARE 109
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F++ AK++ +K ++NN G +L
Sbjct: 110 HGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNEANGIKL 156
>gi|426339031|ref|XP_004033468.1| PREDICTED: ras-related protein Rab-17 isoform 1 [Gorilla gorilla
gorilla]
Length = 212
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 101/178 (56%), Gaps = 24/178 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A A ++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDVGAASLKLEIWDTAGQEKYHSVCHLYFRGANAVLLVYDITRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ + + P +++ L GNK DL R V + EG+ +A+
Sbjct: 114 KDLE--------------------EELHPGEVLVMLVGNKTDLSQERE-VTFQEGKEFAD 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GRRLVETAEAP-KTSNCC 251
LLFMETSAK V+E+F +A++L ++ GQ G V E P + + CC
Sbjct: 153 SQKLLFMETSAKLNHQVSEVFNMVAQELLQRGDEEGQAPRGDAAVALNEGPMRQAKCC 210
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 45/201 (22%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ LD I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F NI K+W++ +++ A N+ L GNKAD+ S+R
Sbjct: 100 ESSFN---------------NI------KNWIRNIEQHASDNVNKILVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK-------------EVNNG 232
V S+G+A A+E G+ F ETSAKT MNV+E+F IA+ + ++ ++N
Sbjct: 139 VPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQRLAESDSKTEPQTLKINQP 198
Query: 233 QGGRRLVETAEAPKTSNCCNT 253
G +A+A +TS+CC +
Sbjct: 199 DQG---AGSAQASQTSSCCGS 216
>gi|327265053|ref|XP_003217323.1| PREDICTED: ras-related protein Rab-37-like [Anolis carolinensis]
Length = 232
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 105/189 (55%), Gaps = 28/189 (14%)
Query: 69 FYPYLFSA----AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDIT 124
F P FSA F + V +D V ++ +IWDTAGQER+ ++ YYR+AQA +++YDIT
Sbjct: 63 FIPGSFSATVGIGFTNKVVTVDGVKVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDIT 122
Query: 125 NQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRR 184
+ RM+ NI ++W+ E+ A ++VI L GNKAD+ +S R
Sbjct: 123 S---------------RMSFDNI------RAWLTEIHEYAQRDVVIMLLGNKADV-SSER 160
Query: 185 CVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVET--A 242
V +GEA A E G+ FMETSAKT MNV F+ IAK+L ++ + + R +
Sbjct: 161 VVRTEDGEALAREYGVPFMETSAKTGMNVELAFLAIAKELKQRALFQPEEPRFQIHDYIE 220
Query: 243 EAPKTSNCC 251
K S+CC
Sbjct: 221 SQKKRSSCC 229
>gi|157819733|ref|NP_001102833.1| ras-related protein Rab-17 [Rattus norvegicus]
gi|149037620|gb|EDL92051.1| similar to RAB17, member RAS oncogene family (predicted), isoform
CRA_a [Rattus norvegicus]
gi|149037621|gb|EDL92052.1| similar to RAB17, member RAS oncogene family (predicted), isoform
CRA_a [Rattus norvegicus]
gi|149037622|gb|EDL92053.1| similar to RAB17, member RAS oncogene family (predicted), isoform
CRA_a [Rattus norvegicus]
gi|149037623|gb|EDL92054.1| similar to RAB17, member RAS oncogene family (predicted), isoform
CRA_a [Rattus norvegicus]
gi|187469786|gb|AAI67022.1| RAB17, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 94/157 (59%), Gaps = 22/157 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V L +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDLGSSSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFHKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
++L++ P +V+ L GNK DL R V + EG+ +AE
Sbjct: 114 EDLEK--------------------EFHPGEVVVMLVGNKTDLGEERE-VTFQEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ 233
LLFME+SAK V+EIF IA++L ++ +GQ
Sbjct: 153 SKSLLFMESSAKLNYQVSEIFNTIAQELLQR-AGDGQ 188
>gi|342185577|emb|CCC95061.1| putative small GTP-binding protein Rab5b [Trypanosoma congolense
IL3000]
Length = 207
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 94/182 (51%), Gaps = 28/182 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+ + D T+ F+IWDTAGQERY +LA MYYR A AA++VY+I + +TF RAK W
Sbjct: 47 ASFLRYVCSVGDTTVNFDIWDTAGQERYKSLASMYYRGAAAALVVYEIPSWETFERAKHW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRR----CVEYSEG 191
V+EL +P I + L GNK+DL S CV E
Sbjct: 107 VRELAANSPETI----------------------VILVGNKSDLRGSGSATMGCVSTDEA 144
Query: 192 EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL-PKKEVNNGQGGRRLVETAEAPKT-SN 249
YA E LLF E SAK V E+F +IA++L N +GG L A+ K S
Sbjct: 145 STYARELNLLFSEASAKDGSGVREVFTQIAQRLVASNNTNTVRGGGVLGAKADHDKKGSG 204
Query: 250 CC 251
CC
Sbjct: 205 CC 206
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
A + +YK+VLLG+S VGKSSLV R + ++ E Q ST+G
Sbjct: 8 APMKKYKIVLLGDSGVGKSSLVQRLAKNEWCENQNSTVG 46
>gi|405974092|gb|EKC38762.1| Ras-related protein Rab-31 [Crassostrea gigas]
Length = 224
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 90/147 (61%), Gaps = 22/147 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+F+T+ + + DV+ +F+IWDTAGQE+Y +LAPMYYR A AAIIVYDIT + T+ K W
Sbjct: 40 ASFMTKRLEVGDVSYQFQIWDTAGQEKYRSLAPMYYRGASAAIIVYDITREATYRTVKDW 99
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+EL+R ++VIA+AGNK+DL R V + E YA
Sbjct: 100 ---------------------VRELKRNCTADMVIAIAGNKSDLNDLRE-VRARDAEEYA 137
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAK 222
+ G LF+ETSA +A+NV +F I K
Sbjct: 138 QSIGALFIETSALSAVNVPHLFTAIGK 164
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ K+ LLGES VGKSS+VLRFV F ESTIG
Sbjct: 5 EVKVCLLGESGVGKSSIVLRFVSDSFKGALESTIGA 40
>gi|66801519|ref|XP_629685.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208507|sp|P36409.2|RAB2A_DICDI RecName: Full=Ras-related protein Rab-2A
gi|60463063|gb|EAL61258.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 207
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 101/187 (54%), Gaps = 35/187 (18%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D+ I+ +IWDTAGQE + ++ YYR + A++VYDIT +DTF W+K
Sbjct: 42 FGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLK 101
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
+ A+S+ A N+ I L GNK+D+ S+R V Y EG +A+E
Sbjct: 102 D--------------ARSY-------ANSNMTIILIGNKSDME-SKRAVSYEEGRQFADE 139
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRLVE-------TAEA 244
NGL+F+ETSAKTA NV E FV A K+ +K ++NN G +L T +
Sbjct: 140 NGLIFLETSAKTASNVEEAFVNTASKIYEKIQKGDFDINNESFGIKLGAPTSKQDGTDQK 199
Query: 245 PKTSNCC 251
P CC
Sbjct: 200 PAGGGCC 206
>gi|397483947|ref|XP_003813150.1| PREDICTED: ras-related protein Rab-17 [Pan paniscus]
Length = 211
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 103/178 (57%), Gaps = 25/178 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDVGAASLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ +EL P +++ L GNK DL R V + EG+ +A+
Sbjct: 114 KDLE-----------------EELH----PEVLVMLVGNKTDLSQERE-VTFQEGKEFAD 151
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GRRLVETAEAP-KTSNCC 251
LLFMETSAK V+E+F +A++L ++ GQ G V + P + + CC
Sbjct: 152 SQKLLFMETSAKLNHQVSEVFNTVAQELLQRGDEEGQAPRGDAAVALNKGPARQAKCC 209
>gi|428186007|gb|EKX54858.1| hypothetical protein GUITHDRAFT_149882 [Guillardia theta CCMP2712]
Length = 207
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 101/187 (54%), Gaps = 35/187 (18%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D+ I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 43 FGARRITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 92
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF SW+++ ++ + N+ I L GNK+DL RR V Y+EGEA+A E
Sbjct: 93 -----------TFNHLTSWLEDARQHSNSNMTIMLIGNKSDLE-HRRAVTYAEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRLVETA-------EA 244
NGL+F+ETSAKTA NV E FV AK++ K +V N G R+ T+ +
Sbjct: 141 NGLIFLETSAKTAHNVEEAFVNTAKQIYAKIQEGVFDVTNESFGIRVGVTSPNQGSGGDG 200
Query: 245 PKTSNCC 251
+ CC
Sbjct: 201 QRKGGCC 207
>gi|402587368|gb|EJW81303.1| hypothetical protein WUBG_07788 [Wuchereria bancrofti]
Length = 212
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 98/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 43 FGARMITIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 92
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF SW+++ ++ + N+VI L GNK+DL +RR V+ EGEA+A E
Sbjct: 93 -----------TFNHLASWLEDARQHSNSNMVIMLIGNKSDLE-ARREVKKEEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F++ AK++ +K ++NN G +L
Sbjct: 141 HGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNEANGIKL 187
>gi|332815792|ref|XP_003309588.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-17 [Pan
troglodytes]
Length = 211
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 103/178 (57%), Gaps = 25/178 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDVGAASLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ +EL P +++ L GNK DL R V + EG+ +A+
Sbjct: 114 KDLE-----------------EELH----PEVLVMLVGNKTDLSQERE-VTFQEGKEFAD 151
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GRRLVETAEAP-KTSNCC 251
LLFMETSAK V+E+F +A++L ++ GQ G V + P + + CC
Sbjct: 152 SQKLLFMETSAKLNHQVSEVFNTVAQELLQRGDEEGQAPRGDAAVALNKGPARQAKCC 209
>gi|324529832|gb|ADY49047.1| Ras-related protein Rab-2, partial [Ascaris suum]
Length = 212
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 106/192 (55%), Gaps = 40/192 (20%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 43 FGARMITIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 92
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF SW+++ ++ + N+VI L GNK+DL +RR V+ EGEA+A E
Sbjct: 93 -----------TFNHLTSWLEDARQHSNSNMVIMLIGNKSDLE-ARREVKKEEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL--VETAEAPK--- 246
+GL+FMETSAKTA NV E F++ AK++ +K ++NN G +L + +P
Sbjct: 141 HGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNEANGIKLGPQHSPSSPNSPG 200
Query: 247 -------TSNCC 251
+SNCC
Sbjct: 201 GNPALSGSSNCC 212
>gi|406603144|emb|CCH45297.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 211
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 95/153 (62%), Gaps = 24/153 (15%)
Query: 76 AAFITQTVCLDDVT-IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAFIT+T+ LD++T I+FEIWDTAGQERY +LAPMYYRNA +AI+V+D+T+ +F +
Sbjct: 44 AAFITKTIKLDELTSIKFEIWDTAGQERYKSLAPMYYRNANSAILVFDLTDSTSFHKMIK 103
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR--RCVEYSEGE 192
W +EL LQ AP ++I + GNK DL + ++ S +
Sbjct: 104 WYEELS-------------------LQ--APDTLIIKIIGNKLDLKNNLNFNIIDDSTVK 142
Query: 193 AYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
+ +E+ + ++ETSAKT NV +IF EI K LP
Sbjct: 143 QWCDEHKVQYIETSAKTGENVEKIFREIGKDLP 175
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
ND TQ + KLVLLG KSS+V RFV+ F EY+ESTIG
Sbjct: 4 DNDITQQRTAHAKLVLLG-----KSSIVQRFVKNSFDEYRESTIGA 44
>gi|332841824|ref|XP_509819.3| PREDICTED: ras-related protein Rab-2B isoform 3 [Pan troglodytes]
gi|426376306|ref|XP_004054945.1| PREDICTED: ras-related protein Rab-2B isoform 2 [Gorilla gorilla
gorilla]
gi|441667225|ref|XP_004091958.1| PREDICTED: ras-related protein Rab-2B [Nomascus leucogenys]
Length = 192
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 30/166 (18%)
Query: 70 YPYLFSAAFITQT--------VCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVY 121
Y YLF I T V +D I+ +IWDTAGQE + ++ YYR A A++VY
Sbjct: 3 YAYLFKYIIIGDTGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 62
Query: 122 DITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT 181
DIT ++T F SW+++ ++ + N+VI L GNK+DL
Sbjct: 63 DITRRET---------------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE- 100
Query: 182 SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
SRR V+ EGEA+A E+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 101 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 146
>gi|410961830|ref|XP_003987481.1| PREDICTED: ras-related protein Rab-2B isoform 2 [Felis catus]
Length = 192
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 30/166 (18%)
Query: 70 YPYLFSAAFITQT--------VCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVY 121
Y YLF I T V +D I+ +IWDTAGQE + ++ YYR A A++VY
Sbjct: 3 YAYLFKYIIIGDTGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 62
Query: 122 DITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT 181
DIT ++T F SW+++ ++ + N+VI L GNK+DL
Sbjct: 63 DITRRET---------------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE- 100
Query: 182 SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
SRR V+ EGEA+A E+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 101 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 146
>gi|345780982|ref|XP_003432061.1| PREDICTED: ras-related protein Rab-2B [Canis lupus familiaris]
Length = 192
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 30/166 (18%)
Query: 70 YPYLFSAAFITQT--------VCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVY 121
Y YLF I T V +D I+ +IWDTAGQE + ++ YYR A A++VY
Sbjct: 3 YAYLFKYIIIGDTGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 62
Query: 122 DITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT 181
DIT ++T F SW+++ ++ + N+VI L GNK+DL
Sbjct: 63 DITRRET---------------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE- 100
Query: 182 SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
SRR V+ EGEA+A E+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 101 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 146
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 98/180 (54%), Gaps = 26/180 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F +TV LD TI+ +IWDTAGQER+ T+ YYR A I+VYD+T+QD+F K W+
Sbjct: 45 FKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLN 104
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
E+ R A N++ L GNK+DL T+ + V Y +A+A+E
Sbjct: 105 EIDRYASENVNKL---------------------LVGNKSDL-TANKVVSYETAKAFADE 142
Query: 198 NGLLFMETSAKTAMNVNEIFV----EIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCCNT 253
G+ FMETSAK+A NV + F+ EI ++ + +NN + + + S CC++
Sbjct: 143 IGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNARPPTVQIRGQPVNQKSGCCSS 202
>gi|428182166|gb|EKX51028.1| hypothetical protein GUITHDRAFT_135041 [Guillardia theta CCMP2712]
Length = 210
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 25/179 (13%)
Query: 59 CMTQIVINVVFYPYLFS---AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQ 115
C+ I F P+ S A+F+ + + + + + +IWDTAGQER+ ++APMYYR A+
Sbjct: 22 CLVHRFIEGKFVPHGASTIGASFMVKKMNVGGMRLTMQIWDTAGQERFRSMAPMYYRGAE 81
Query: 116 AAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGN 175
AAI+V D TN D++ + +SW V+EL+R A I +ALA N
Sbjct: 82 AAILVLDCTNADSYEKVRSW---------------------VEELKRNASGEIFLALACN 120
Query: 176 KADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG 234
K DL RR V E EAYA+ G + METSAK+ ++E+F +AK L +K+ QG
Sbjct: 121 KCDLVEERR-VAQEEAEAYAKSIGAVCMETSAKSNKGIDELFGAVAKGLVQKKKTQEQG 178
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
Q K+V+LG++ VGK+ LV RF+ G+F + STIG
Sbjct: 7 QAKVVVLGDTGVGKTCLVHRFIEGKFVPHGASTIG 41
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 104/190 (54%), Gaps = 30/190 (15%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
Y F +T+ L+ T++ +IWDTAGQER+ T+ YYR A I+VYD+T++DTF
Sbjct: 38 YISTIGVDFKIRTIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTF 97
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
K W++E+ R A ++ L GNK+DL T+++ VE++
Sbjct: 98 TNVKQWLQEIDRYAVEGVNKL---------------------LVGNKSDL-TTKKVVEHN 135
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK----EVNNGQGGRR----LVET 241
E +++A+E G+ F+ETSAK A NV + F+ ++K++ + + +G GG+ L +T
Sbjct: 136 EAKSFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSTSMASGSGGKSTIKGLGQT 195
Query: 242 AEAPKTSNCC 251
E CC
Sbjct: 196 VEQKTAGGCC 205
>gi|336391093|ref|NP_001229573.1| ras-related protein Rab-2A isoform b [Homo sapiens]
gi|332213900|ref|XP_003256068.1| PREDICTED: ras-related protein Rab-2A isoform 2 [Nomascus
leucogenys]
gi|402878331|ref|XP_003902846.1| PREDICTED: ras-related protein Rab-2A isoform 2 [Papio anubis]
gi|194387202|dbj|BAG59967.1| unnamed protein product [Homo sapiens]
Length = 188
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 36/183 (19%)
Query: 70 YPYLFSAAFITQT--------VCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVY 121
Y YLF I T + +D I+ +IWDTAGQE + ++ YYR A A++VY
Sbjct: 3 YAYLFKYIIIGDTGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 62
Query: 122 DITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT 181
DIT +D TF +W+++ ++ + N+VI L GNK+DL
Sbjct: 63 DITRRD---------------------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE- 100
Query: 182 SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGG 235
SRR V+ EGEA+A E+GL+FMETSAKTA NV E F+ AK++ +K ++NN G
Sbjct: 101 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANG 160
Query: 236 RRL 238
++
Sbjct: 161 IKI 163
>gi|350586941|ref|XP_003482310.1| PREDICTED: ras-related protein Rab-2B-like isoform 2 [Sus scrofa]
Length = 192
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 30/166 (18%)
Query: 70 YPYLFSAAFITQT--------VCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVY 121
Y YLF I T V +D I+ +IWDTAGQE + ++ YYR A A++VY
Sbjct: 3 YAYLFKYIIIGDTGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 62
Query: 122 DITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT 181
DIT ++T F SW+++ ++ + N+VI L GNK+DL
Sbjct: 63 DITRRET---------------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE- 100
Query: 182 SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
SRR V+ EGEA+A E+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 101 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 146
>gi|328874448|gb|EGG22813.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 210
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 103/182 (56%), Gaps = 32/182 (17%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D+ I+ +IWDTAGQE + ++ YYR + A++VYDIT ++TF W+K
Sbjct: 42 FGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRETFNHLTCWLK 101
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
+ AKS+ A PN+ I L GNK+DL +R V Y EGE +A E
Sbjct: 102 D--------------AKSF-------ANPNMTIILIGNKSDLE-QKRAVAYEEGEQFARE 139
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRLVETAEAPKTSNCC 251
NGL+F+ETSAKTA NV + F+ AK++ K ++NN G +L AP+ ++
Sbjct: 140 NGLIFLETSAKTAANVEDAFIRTAKEIYNKIQTGDFDINNETFGIKL----GAPQKADAT 195
Query: 252 NT 253
NT
Sbjct: 196 NT 197
>gi|294939398|ref|XP_002782450.1| Rab5, putative [Perkinsus marinus ATCC 50983]
gi|239894056|gb|EER14245.1| Rab5, putative [Perkinsus marinus ATCC 50983]
Length = 210
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 101/187 (54%), Gaps = 37/187 (19%)
Query: 76 AAFITQTVCL--DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF TQ + + + +I+FEIWDTAGQER+ +LAPMYYRNA AI+VYD T+ +F RA+
Sbjct: 47 AAFSTQDLLVPGSNRSIKFEIWDTAGQERFRSLAPMYYRNASCAIVVYDQTSMASFVRAQ 106
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
WVK+L S V P+IV+ALA NK D+ + R V +
Sbjct: 107 DWVKQL---------------SMVNN------PDIVVALAANKMDV--ADREVPLATARE 143
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE---------VNNGQGGRRLVETAEA 244
YA +GL+F ETSAKT NV +F IA+KLP + + G G T A
Sbjct: 144 YAMTHGLVFCETSAKTGQNVVALFEAIAQKLPLRSNPVGPTTTPITLGMGN---TPTHAA 200
Query: 245 PKTSNCC 251
T CC
Sbjct: 201 TTTRGCC 207
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNR 349
YKLVLLG+++VGK+SLV RFV F + ++TIG + + +P NR
Sbjct: 13 YKLVLLGDASVGKTSLVQRFVHNSFEDTVQTTIGAAFSTQDLL---VPGSNR 61
>gi|414967|gb|AAA80150.1| Rab2, partial [Dictyostelium discoideum]
Length = 199
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 101/187 (54%), Gaps = 35/187 (18%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D+ I+ +IWDTAGQE + ++ YYR + A++VYDIT +DTF W+K
Sbjct: 34 FGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLK 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
+ A+S+ A N+ I L GNK+D+ S+R V Y EG +A+E
Sbjct: 94 D--------------ARSY-------ANSNMTIILIGNKSDME-SKRAVSYEEGRQFADE 131
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRLVE-------TAEA 244
NGL+F+ETSAKTA NV E FV A K+ +K ++NN G +L T +
Sbjct: 132 NGLIFLETSAKTASNVEEAFVNTASKIYEKIQKGDFDINNESFGIKLGAPTSKQDGTDQK 191
Query: 245 PKTSNCC 251
P CC
Sbjct: 192 PAGGGCC 198
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 45/201 (22%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ LD I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F NI K+W++ +++ A N+ L GNKAD+ S+R
Sbjct: 100 ESSFN---------------NI------KNWIRNIEQHASDNVNKILVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK-------------EVNNG 232
V S+G+A A+E G+ F ETSAKT MNV E+F IA+ + ++ ++N
Sbjct: 139 VPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDSKTEPQTLKINQP 198
Query: 233 QGGRRLVETAEAPKTSNCCNT 253
G +A+A +TS+CC +
Sbjct: 199 DQG---AGSAQASQTSSCCGS 216
>gi|345807059|ref|XP_003435547.1| PREDICTED: ras-related protein Rab-2A-like [Canis lupus familiaris]
Length = 189
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 99/183 (54%), Gaps = 36/183 (19%)
Query: 70 YPYLFSAAFITQT--------VCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVY 121
Y YLF I T + +D I+ +IWDTAGQE + ++ YYR A A++VY
Sbjct: 3 YAYLFKYIIIGDTGVEFGARMITIDGKRIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 62
Query: 122 DITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT 181
DIT +D TF +W+++ + + N+VI L GNK+DL
Sbjct: 63 DITRRD---------------------TFNHLTTWLEDARHYSNSNMVIMLIGNKSDLE- 100
Query: 182 SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGG 235
SRR V EGEA+A E+GL+FMETSAKTA NV E F+ AK++ +K ++NN G
Sbjct: 101 SRREVNKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVLDINNEANG 160
Query: 236 RRL 238
++
Sbjct: 161 VKI 163
>gi|393911454|gb|EFO26789.2| Ras-like protein Rab-2 [Loa loa]
Length = 212
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 98/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 43 FGARMITIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 92
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF SW+++ ++ + N+VI L GNK+DL +RR V+ EGEA+A E
Sbjct: 93 -----------TFNHLASWLEDARQHSNSNMVIMLIGNKSDLE-ARREVKKEEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F++ AK++ +K ++NN G +L
Sbjct: 141 HGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNEANGIKL 187
>gi|255072909|ref|XP_002500129.1| ras-related gtp-binding protein, alternative splice [Micromonas sp.
RCC299]
gi|226515391|gb|ACO61387.1| ras-related gtp-binding protein, alternative splice [Micromonas sp.
RCC299]
Length = 204
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 102/180 (56%), Gaps = 28/180 (15%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F+++T+ L+D T+R ++WDTAGQER+ +L P Y R++ A++VYD++++ +F W+
Sbjct: 46 FLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSSRSSFANTSRWID 105
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
E++ +R + ++++ L GNK DL T +R V EG+A A E
Sbjct: 106 EVR-------------------TERGS--DVIVVLVGNKTDL-TDKREVSVEEGDARARE 143
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR---RLVE---TAEAPKTSNCC 251
G++F+ETSAK NV +F +IA LP E + RLV+ TA AP S+C
Sbjct: 144 AGVMFIETSAKAGFNVKALFRKIAAALPGMEAPAAPAAKVEDRLVDVKLTAPAPPASSCA 203
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 291 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
T + +YKLV LG+ +VGK+S++ RF+ +F ++TIG
Sbjct: 3 TVTPMAKYKLVFLGDQSVGKTSIISRFMYDKFDNSYQATIG 43
>gi|346467757|gb|AEO33723.1| hypothetical protein [Amblyomma maculatum]
Length = 214
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 22/146 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+++T+ V ++ V I IWDTAGQER+H L P+YYR+A AA++VYD+T+ D+F R + W
Sbjct: 83 ASYLTKRVVIEGVPITLAIWDTAGQERFHALGPIYYRDADAALLVYDMTDNDSFVRVRKW 142
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
VK ELQ+MA I+IA+A NK+DL S++ + E E+YA
Sbjct: 143 VK---------------------ELQQMASKTIIIAIAANKSDLVRSKKF-DIQEAESYA 180
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIA 221
G TSAK+ ++E+F++IA
Sbjct: 181 ASIGARVFVTSAKSGEGIDEVFLDIA 206
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 11/75 (14%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPT 346
P ++ +KLVLLG+ VGK+SLVLR+V F E Q++T+ Q+S+ T
Sbjct: 38 PRMSSKPSATTFKLVLLGDGRVGKTSLVLRYVNNVFSEKQQATV----QASY------LT 87
Query: 347 KNRLNNNVPITF-VW 360
K + VPIT +W
Sbjct: 88 KRVVIEGVPITLAIW 102
>gi|255080986|ref|XP_002504059.1| predicted protein [Micromonas sp. RCC299]
gi|226519326|gb|ACO65317.1| predicted protein [Micromonas sp. RCC299]
Length = 222
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 89/154 (57%), Gaps = 26/154 (16%)
Query: 76 AAFITQTVCLD----DVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGR 131
AAF+ +++ + D ++FEIWDTAGQERY +LAP+YYR A AA++VYDIT+ +F +
Sbjct: 88 AAFLAKSLRIPEHGPDAAVKFEIWDTAGQERYASLAPLYYRGAGAAVVVYDITSPASFEK 147
Query: 132 AKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEG 191
A+ WVKELQ+ A PNI+ I L GNK DL +RR V +
Sbjct: 148 ARFWVKELQKHASPNIN---------------------IVLVGNKKDLGDTRRAVSREDA 186
Query: 192 EAYAEENGLLFM-ETSAKTAMNVNEIFVEIAKKL 224
A+A ENG+ E SA + V EIF +A L
Sbjct: 187 RAFANENGMAMECEASALSGEGVVEIFKSVAMSL 220
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 265 HILTMANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHE 324
H L + S + G R + + + KLVLLG++ VGKS++V+RFV+G+F E
Sbjct: 21 HALLRGVNAPSGPSAPGARAEGSVVPGVPRETRVKLVLLGDTGVGKSAIVVRFVQGEFSE 80
Query: 325 YQESTIG 331
+ T+G
Sbjct: 81 ESKVTVG 87
>gi|295667515|ref|XP_002794307.1| GTP-binding protein YPT52 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286413|gb|EEH41979.1| GTP-binding protein YPT52 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226291866|gb|EEH47294.1| GTP-binding protein ypt5 [Paracoccidioides brasiliensis Pb18]
Length = 209
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 107/194 (55%), Gaps = 31/194 (15%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYY 111
++ D D M Q I + F+++T+ L+D T+R ++WDTAGQER+ +L P Y
Sbjct: 36 FMYDSFDNMYQATIGI---------DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 86
Query: 112 RNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIA 171
R++ A++VYDI+N AKS F + W+ +++ +++I
Sbjct: 87 RDSSVAVVVYDISN------AKS---------------FQNTRKWIDDVRGERGNDVIIV 125
Query: 172 LAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN 231
L GNK DL RR V ++GE A++NGL+F+ETSAK NV ++F IA+ LP +
Sbjct: 126 LVGNKTDL-NDRREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMDDEA 184
Query: 232 GQGGRRLVETAEAP 245
G+G ++++ P
Sbjct: 185 GRGANQMIDVNINP 198
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++KLV LGE +VGK+SL+ RF+ F ++TIG
Sbjct: 16 KFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIG 50
>gi|258573301|ref|XP_002540832.1| GTP-binding protein ryh1 [Uncinocarpus reesii 1704]
gi|237901098|gb|EEP75499.1| GTP-binding protein ryh1 [Uncinocarpus reesii 1704]
Length = 210
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 99/176 (56%), Gaps = 22/176 (12%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
Y F+++T+ LDD T+R ++WDTAGQER+ +L P Y R++ A++VYDI+N
Sbjct: 46 YQATIGIDFLSKTMYLDDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISN---- 101
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
AKS F + WV +++ +++I L GNK DL +R V +
Sbjct: 102 --AKS---------------FQNTRKWVDDVRGERGNDVIIVLVGNKTDL-NDKREVTTA 143
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
+GE A++NGL+F+ETSAK NV ++F IA LP E G+G ++++ P
Sbjct: 144 QGEEEAKKNGLMFIETSAKVGYNVKQLFRRIANALPGMEGEAGRGDNQMIDVNINP 199
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++KLV LGE +VGK+SL+ RF+ F ++TIG
Sbjct: 17 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIG 51
>gi|219123942|ref|XP_002182274.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406235|gb|EEC46175.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 210
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 97/181 (53%), Gaps = 30/181 (16%)
Query: 47 CMAQIWLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTL 106
C+ + R + + I V F + S A DD ++ +IWDTAGQE + ++
Sbjct: 21 CLLLQFTDKRFQPVHDLTIGVEFGARMISVA--------DDTQVKLQIWDTAGQESFRSI 72
Query: 107 APMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPP 166
YYR A A++VYDIT +DTF + L R W++E + A P
Sbjct: 73 TRSYYRGAAGALLVYDITRRDTF-------QHLSR--------------WLEEAKSHAQP 111
Query: 167 NIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
N+VI L GNK DL RR V EG+ +A+ NGLLF+ETSAKTA NV + F++ AK + +
Sbjct: 112 NMVILLIGNKNDLE-HRRAVTAEEGQEFADANGLLFLETSAKTAFNVEQAFLKTAKSIHE 170
Query: 227 K 227
K
Sbjct: 171 K 171
>gi|17507539|ref|NP_491233.1| Protein UNC-108 [Caenorhabditis elegans]
gi|308485248|ref|XP_003104823.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|308257521|gb|EFP01474.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|341876619|gb|EGT32554.1| CBN-UNC-108 protein [Caenorhabditis brenneri]
gi|341895318|gb|EGT51253.1| hypothetical protein CAEBREN_21630 [Caenorhabditis brenneri]
gi|373219190|emb|CCD66422.1| Protein UNC-108 [Caenorhabditis elegans]
Length = 214
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 98/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 43 FGARMVTIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 92
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF SW+++ ++ + N+VI L GNK+DL +RR V+ EGEA+A E
Sbjct: 93 -----------TFNHLTSWLEDARQHSNSNMVIMLIGNKSDLE-ARREVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F++ AK++ +K ++NN G +L
Sbjct: 141 HGLVFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNEANGIKL 187
>gi|426232814|ref|XP_004010415.1| PREDICTED: ras-related protein Rab-2B isoform 2 [Ovis aries]
Length = 192
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 30/166 (18%)
Query: 70 YPYLFSAAFITQT--------VCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVY 121
Y YLF I T V +D I+ +IWDTAGQE + ++ YYR A A++VY
Sbjct: 3 YAYLFKYIIIGDTGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 62
Query: 122 DITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT 181
DIT ++T F SW+++ ++ + N+VI L GNK+DL
Sbjct: 63 DITRRET---------------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE- 100
Query: 182 SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
SRR V+ EGEA+A E+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 101 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 146
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 99/181 (54%), Gaps = 29/181 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F +TV LD I+ +IWDTAGQER+ T+ YYR A I+VYD+T+Q++F K W+
Sbjct: 45 FKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLN 104
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
E+ R A N++ L GNK+DL TS++ VEYS +A+A+E
Sbjct: 105 EIDRYASENVNKL---------------------LVGNKSDL-TSKKVVEYSVAKAFADE 142
Query: 198 NGLLFMETSAKTAMNVNEIFV----EIAKKLPKKEVNNGQGGRRLVETAEAP---KTSNC 250
G+ F+ETSAK A NV + F+ EI ++ + + GG + P K+S+C
Sbjct: 143 IGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTKAGGPVVRPQEGKPINSKSSSC 202
Query: 251 C 251
C
Sbjct: 203 C 203
>gi|348577587|ref|XP_003474565.1| PREDICTED: ras-related protein Rab-2B-like isoform 1 [Cavia
porcellus]
Length = 192
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 30/166 (18%)
Query: 70 YPYLFSAAFITQT--------VCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVY 121
Y YLF I T V +D I+ +IWDTAGQE + ++ YYR A A++VY
Sbjct: 3 YAYLFKYIIIGDTGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 62
Query: 122 DITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT 181
DIT ++T F SW+++ ++ + N+VI L GNK+DL
Sbjct: 63 DITRRET---------------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE- 100
Query: 182 SRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
SRR V+ EGEA+A E+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 101 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 146
>gi|345441813|ref|NP_001230879.1| RAB17, member RAS oncogene family [Sus scrofa]
Length = 214
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 91/152 (59%), Gaps = 21/152 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V L +++ EIWDTAGQE+YH++ +Y+R A AA++VYD+T +D+F +A+ W+
Sbjct: 54 AFFTKVVDLGAASLKLEIWDTAGQEKYHSVCHLYFRGANAALVVYDVTRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ + ++V+ L GNK DL R V + EG+ +AE
Sbjct: 114 KDLE--------------------EEFRLGDVVVMLVGNKLDLGKERE-VAFEEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
GLLFMETSAK V E F IA++L ++E
Sbjct: 153 SKGLLFMETSAKLNHQVTEAFGAIAQELWRRE 184
>gi|12844668|dbj|BAB26452.1| unnamed protein product [Mus musculus]
Length = 214
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 101/180 (56%), Gaps = 26/180 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF + + L +++ EIWDTAGQE+Y ++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFKKVLDLGSSSLKLEIWDTAGQEKYQSVCHLYFRGANAALLVYDITRKDSFHKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
++L+ KE Q P +V+ L GNK DL R V + EG+ +AE
Sbjct: 114 EDLE-----------------KEFQ---PGEVVVMLVGNKTDLGEERE-VTFQEGKEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG----QGGRRLVETAEAP-KTSNCC 251
LLFMETSAK V+EIF +A++L ++ + G Q G + E P + CC
Sbjct: 153 SKSLLFMETSAKLNYQVSEIFNTVAQELLQRAGDTGSSRPQEGEAVALNQEPPIRQRQCC 212
>gi|189205773|ref|XP_001939221.1| GTP-binding protein ryh1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330935415|ref|XP_003304956.1| hypothetical protein PTT_17690 [Pyrenophora teres f. teres 0-1]
gi|187975314|gb|EDU41940.1| GTP-binding protein ryh1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311318146|gb|EFQ86893.1| hypothetical protein PTT_17690 [Pyrenophora teres f. teres 0-1]
Length = 204
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 103/186 (55%), Gaps = 26/186 (13%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
Y F+++T+ L+D T+R ++WDTAGQER+ +L P Y R++ A++VYDITN+ TF
Sbjct: 40 YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNKKTF 99
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
+ WV ++ R N +++I L GNK DL +R V +
Sbjct: 100 ENTRKWVDDV-RGERGN--------------------DVIIVLVGNKTDL-NDKREVTTA 137
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVET----AEAP 245
+GE A++N L+F+ETSAK NV +F IA+ LP E QG ++++ ++ P
Sbjct: 138 QGEEEAKKNNLMFIETSAKVGHNVKALFKRIAQALPGMEGEGQQGQSQMIDVNINPSQPP 197
Query: 246 KTSNCC 251
+ S+C
Sbjct: 198 QDSSCS 203
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++KLV LGE +VGK+SL+ RF+ F ++TIG
Sbjct: 11 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIG 45
>gi|399163139|gb|AFP33145.1| rab-2, partial [Caenorhabditis elegans]
Length = 213
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 98/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 42 FGARMVTIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 91
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF SW+++ ++ + N+VI L GNK+DL +RR V+ EGEA+A E
Sbjct: 92 -----------TFNHLTSWLEDARQHSNSNMVIMLIGNKSDLE-ARREVKREEGEAFARE 139
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F++ AK++ +K ++NN G +L
Sbjct: 140 HGLVFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNEANGIKL 186
>gi|448535070|ref|XP_003870898.1| Ypt52 protein [Candida orthopsilosis Co 90-125]
gi|380355254|emb|CCG24771.1| Ypt52 protein [Candida orthopsilosis]
Length = 225
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 108/197 (54%), Gaps = 43/197 (21%)
Query: 76 AAFITQTVCLDD--VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
AAF+TQ++ + + TI+FEIWDTAGQERY +LAPMYYRNA +A+ VYDIT++++F +A+
Sbjct: 50 AAFLTQSITIPESQTTIKFEIWDTAGQERYKSLAPMYYRNANSALCVYDITSRNSFTKAQ 109
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
W+K EL++ AP IV+AL GNK DL +R V+ E +
Sbjct: 110 DWIK---------------------ELKKQAPSEIVVALVGNKVDLDDNRE-VQSDEVDE 147
Query: 194 YAEE---NG--LLFMETSAKTAMNVNEIFVEIAKKLPKKEV--------NNGQ-GGRR-- 237
Y E +G ++ E SAK V E+F I + LP +EV G+ GGRR
Sbjct: 148 YISELQGDGFKIIKAECSAKNGDGVVELFEAIGRALPVEEVLAANANRSRQGEVGGRRPG 207
Query: 238 ---LVETAEAPKTSNCC 251
L A SN C
Sbjct: 208 GVDLNRPKRAQAQSNSC 224
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 289 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
D + + Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 7 DTSAQRFVQFKLVLLGESAVGKSSIVHRFVKNTFDDARESTIGA 50
>gi|12052816|emb|CAB66580.1| hypothetical protein [Homo sapiens]
gi|49065334|emb|CAG38485.1| RAB17 [Homo sapiens]
gi|117644368|emb|CAL37678.1| hypothetical protein [synthetic construct]
gi|208965408|dbj|BAG72718.1| RAB17, member RAS oncogene family [synthetic construct]
Length = 212
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 101/178 (56%), Gaps = 24/178 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ + + P +++ L GNK DL R V + EG+ +A+
Sbjct: 114 KDLE--------------------EELHPGEVLVMLVGNKTDLSQERE-VTFQEGKEFAD 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GRRLVETAEAP-KTSNCC 251
L FMETSAK V+E+F +A++L ++ GQ G V + P + + CC
Sbjct: 153 SQKLPFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQALRGDAAVALNKGPARQAKCC 210
>gi|116793841|gb|ABK26899.1| unknown [Picea sitchensis]
gi|224286684|gb|ACN41045.1| unknown [Picea sitchensis]
Length = 203
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 98/180 (54%), Gaps = 27/180 (15%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F +TV LD TI+F+IWDTAGQER+ T+ YYR A IIVYDIT+ D+F K W+
Sbjct: 46 FKIKTVELDGKTIKFQIWDTAGQERFKTVTSSYYRGAHGIIIVYDITDMDSFDHVKHWLT 105
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
E++R N++ + L GNK DL +R VE +A+A +
Sbjct: 106 EIERYTSDNVN---------------------MILVGNKCDLA-EKRAVEQQMAKAFAND 143
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK-----EVNNGQGGRRLVETAEAPKTSNCCN 252
G+ F+ETSAK A NV + F+ +A+++ K+ NN Q G ++ + +NCC+
Sbjct: 144 VGIPFLETSAKDATNVEQAFLTMAREIKKRVGGQTTSNNSQIGTVQMKGKPLQQKNNCCS 203
>gi|429328144|gb|AFZ79904.1| Ras-related rab6 small GTP-binding protein, putative [Babesia equi]
Length = 224
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 95/172 (55%), Gaps = 28/172 (16%)
Query: 61 TQIVINVVF------YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNA 114
T IV V+ Y F+++TV + T+R ++WDTAGQER+ +L P Y R++
Sbjct: 26 TSIVTRFVYDHFIPAYAATIGIDFLSKTVTANGKTMRLQLWDTAGQERFRSLMPSYIRDS 85
Query: 115 QAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAG 174
AAI+VYDITN+D+F R K WV+E++ M VI + G
Sbjct: 86 SAAIVVYDITNRDSFTRTK---------------------QWVQEIKDMRGDKAVIVIVG 124
Query: 175 NKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
NK DL +R V Y EGE++A+E LF ETSAK NV+E+F +A KL K
Sbjct: 125 NKTDL-LDKRKVSYEEGESHAKEMNCLFRETSAKNGDNVHELFNLVAVKLLK 175
>gi|62901968|gb|AAY18935.1| DKFZp564M1541 [synthetic construct]
Length = 236
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 102/178 (57%), Gaps = 24/178 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V + +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 78 AFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWL 137
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ + + P +++ L GNK DL + R V + EG+ +A+
Sbjct: 138 KDLE--------------------EELHPGEVLVMLVGNKTDL-SQEREVTFQEGKEFAD 176
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG--GRRLVETAEAP-KTSNCC 251
L FMETSAK V+E+F +A++L ++ GQ G V + P + + CC
Sbjct: 177 SQKLPFMETSAKLNHQVSEVFNTVAQELLQRSDEEGQALRGDAAVALNKGPARQAKCC 234
>gi|2500074|sp|Q39570.1|YPTC4_CHLRE RecName: Full=GTP-binding protein YPTC4
gi|806722|gb|AAA82726.1| YptC4 [Chlamydomonas reinhardtii]
Length = 213
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 105/193 (54%), Gaps = 41/193 (21%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++TF S
Sbjct: 43 FGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS--- 99
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
W+++ ++ A PN+ I L GNK DL T RR V EGE +A+E
Sbjct: 100 ------------------WLEDARQHANPNMTIMLIGNKCDL-THRRAVTTEEGEQFAKE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNN-----------GQGGRRLVE 240
+GL+F+ETSA+TA NV E F+ AK++ KK +V+N G G + V+
Sbjct: 141 HGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGGGNAGPQTVK 200
Query: 241 TAE--APKTSNCC 251
E A K+S+CC
Sbjct: 201 PGEGGAAKSSSCC 213
>gi|300708060|ref|XP_002996218.1| hypothetical protein NCER_100724 [Nosema ceranae BRL01]
gi|239605499|gb|EEQ82547.1| hypothetical protein NCER_100724 [Nosema ceranae BRL01]
Length = 196
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 22/146 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+FIT+T+ D ++FEIWDTAGQERY++L PMYYR AQ +IVYDIT++++F AK W
Sbjct: 46 ASFITKTMTTKDACVKFEIWDTAGQERYNSLIPMYYRGAQIGLIVYDITSRESFDVAKRW 105
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V+EL+ F + K ++K L NK DL R+ V + EG YA
Sbjct: 106 VEELK---------FEKTKDFLK------------VLVANKIDLNEDRK-VTFEEGRDYA 143
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIA 221
+ LLF+E SAK NV++IF +A
Sbjct: 144 IQQNLLFVEASAKDGTNVSKIFELVA 169
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 5/51 (9%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKN 348
YK+V+LG +VGKSSLVL++ + +F+ +ESTIG + I+ +M TK+
Sbjct: 12 YKMVVLGYYSVGKSSLVLKYAKNEFNPNEESTIG-----ASFITKTMTTKD 57
>gi|391331399|ref|XP_003740134.1| PREDICTED: ras-related protein Rab-21-like [Metaseiulus
occidentalis]
Length = 211
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 103/192 (53%), Gaps = 36/192 (18%)
Query: 75 SAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
+A+++T+TV L + IWDTAGQE +H L P+YYR++Q AI+VYDIT++D+F + K+
Sbjct: 40 NASYLTKTVALGMKRVDLAIWDTAGQEMFHALGPLYYRDSQGAILVYDITDEDSFRKVKN 99
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W VKEL++M +V+ + GNK+DL S R V E E+Y
Sbjct: 100 W---------------------VKELKKMLGNEVVLVVIGNKSDLE-SERSVPLHEAESY 137
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNG----------QGGRRLVET--- 241
A+ G TSAK + E+F+ + K++ K +G Q R VET
Sbjct: 138 AKSVGAAHFLTSAKLNRGITEVFLHLCKEMIMKRARDGARRQSTGAGAQRNRLQVETSDD 197
Query: 242 -AEAPKTSNCCN 252
AE +T+ CC+
Sbjct: 198 NAEPTRTNKCCS 209
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 27/34 (79%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 330
+YK+VLLGE VGK+SL+LR+V +F++ + T+
Sbjct: 6 EYKVVLLGEGRVGKTSLILRYVHDKFNDRLDRTV 39
>gi|159473897|ref|XP_001695070.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158276449|gb|EDP02222.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 213
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 105/193 (54%), Gaps = 41/193 (21%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++TF S
Sbjct: 43 FGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS--- 99
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
W+++ ++ A PN+ I L GNK DL T RR V EGE +A+E
Sbjct: 100 ------------------WLEDARQHANPNMTIMLIGNKCDL-THRRAVTTEEGEQFAKE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNN-----------GQGGRRLVE 240
+GL+F+ETSA+TA NV E F+ AK++ KK +V+N G G + V+
Sbjct: 141 HGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGAGNAGPQTVK 200
Query: 241 TAE--APKTSNCC 251
E A K+S+CC
Sbjct: 201 PGEGGAAKSSSCC 213
>gi|388499200|gb|AFK37666.1| unknown [Lotus japonicus]
Length = 216
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 107/198 (54%), Gaps = 39/198 (19%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ LD I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F NI K+W++ +++ A N+ L GNKAD+ S+R
Sbjct: 100 ESSFN---------------NI------KNWIRNIEQHASDNVNKILVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--------- 236
V S+G+A A+E G+ F ETSAKT +NV+E+F IA+ + ++ +N
Sbjct: 139 VPTSKGQALADEYGIKFFETSAKTNLNVDEVFFSIARDIKQRVADNDSKAEPQTLKINQP 198
Query: 237 -RLVETAEAPKTSNCCNT 253
+ +A+A + S CC +
Sbjct: 199 DQGAGSAQAAQKSACCGS 216
>gi|268560844|ref|XP_002646304.1| C. briggsae CBR-UNC-108 protein [Caenorhabditis briggsae]
Length = 214
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 98/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 43 FGARMVTIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 92
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF SW+++ ++ + N+VI L GNK+DL +RR V+ EGEA+A E
Sbjct: 93 -----------TFNHLTSWLEDARQHSNSNMVIMLIGNKSDLE-ARREVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F++ AK++ +K ++NN G +L
Sbjct: 141 HGLVFMETSAKTANNVEEAFIDTAKEIYRKIQEGVFDINNEANGIKL 187
>gi|294949590|ref|XP_002786273.1| Rab5B protein, putative [Perkinsus marinus ATCC 50983]
gi|239900430|gb|EER18069.1| Rab5B protein, putative [Perkinsus marinus ATCC 50983]
Length = 217
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 91/158 (57%), Gaps = 23/158 (14%)
Query: 69 FYPYLFSAAFITQTVCL--DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
F+ AAF+ Q V L + ++ IWDT GQER+ +AP+YYR+A A++VYD+ ++
Sbjct: 62 FHEVTIGAAFLQQIVRLPSSNTQLKLHIWDTGGQERFRAMAPLYYRDAAGAVVVYDVGSK 121
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCV 186
++F K WV EL R+K PP++ IA+AGNKADLP S + V
Sbjct: 122 ESFESVKFWVSEL------------RSK---------GPPDVRIAVAGNKADLPESDQVV 160
Query: 187 EYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
E E + +ENGLL TSA T N+ ++F +A+++
Sbjct: 161 TTQEAEEFCQENGLLCFRTSAMTGANIGKLFEAVAEEV 198
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+ K+VLLG+S VGKSS+ LRF +G+F + E TIG
Sbjct: 34 ESKIVLLGDSGVGKSSMALRFCQGRFPPFHEVTIG 68
>gi|388516339|gb|AFK46231.1| unknown [Medicago truncatula]
Length = 215
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 93/162 (57%), Gaps = 29/162 (17%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ LD I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F ++W++ +++ A N++ L GNKAD+ S+R
Sbjct: 100 EASFNNIRNWIRNIEQHASDNVNKI---------------------LVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
V SEG+A A+E G+ F ETSAKT MNV E+F IA+ + ++
Sbjct: 139 VPTSEGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180
>gi|54020781|ref|NP_001005636.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49257826|gb|AAH74632.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89269892|emb|CAJ83496.1| RAB2B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 95/164 (57%), Gaps = 28/164 (17%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMINIDGKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V EGEA+A E
Sbjct: 94 ------------FSHLTSWLEDARQHSSSNMVIILIGNKSDLE-SRRDVSREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGG 235
+GL+FMETSAKTA NV E F++ AK++ KK +VNN G
Sbjct: 141 HGLIFMETSAKTAANVEEAFIDTAKEIYKKIQQGLFDVNNEANG 184
>gi|326490445|dbj|BAJ84886.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326491645|dbj|BAJ94300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 37/196 (18%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +TV LD I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F NI ++W+K +++ A N+ L GNKAD+ S+R
Sbjct: 100 ESSFN---------------NI------RNWIKNIEQHASDNVSKILVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK--EVNNG-QGGRRLVET- 241
V S+G+A A+E G+ F ETSAKT MNV ++F IA+ + ++ E ++ +GG + T
Sbjct: 139 VPTSKGQALADEYGIQFFETSAKTNMNVEQVFFSIARDIKQRLSEADSKPEGGTIKINTE 198
Query: 242 ----AEAPKTSNCCNT 253
A A + S CC +
Sbjct: 199 GDASAAAGQKSACCGS 214
>gi|330841005|ref|XP_003292496.1| Rab GTPase [Dictyostelium purpureum]
gi|325077244|gb|EGC30969.1| Rab GTPase [Dictyostelium purpureum]
Length = 207
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 97/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D+ I+ +IWDTAGQE + ++ YYR + A++VYDIT +DTF W+K
Sbjct: 42 FGARMITIDNKQIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLK 101
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
+ A+S+ A N+ I L GNK+D+ S+R V Y EG+ +AEE
Sbjct: 102 D--------------ARSY-------ANSNMTIILIGNKSDME-SKRAVSYEEGKQFAEE 139
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
NGL+F+ETSAKTA NV E FV A K+ +K ++NN G +L
Sbjct: 140 NGLIFLETSAKTASNVEEAFVNTAGKIYEKIQKGDFDINNESFGIKL 186
>gi|57997511|emb|CAI46103.1| hypothetical protein [Homo sapiens]
Length = 209
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 33/188 (17%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 94 ------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL-----VETAEAPK 246
+GL+FMETSAKTA NV E F+ AK++ +K +V+N G ++ + T+ P
Sbjct: 141 HGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPS 200
Query: 247 TSNCCNTQ 254
S Q
Sbjct: 201 ASQSAGLQ 208
>gi|403220992|dbj|BAM39125.1| Rab5 GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 76/117 (64%), Gaps = 4/117 (3%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQTV LDD T++FEIWDTAGQERY TLAPMYYR + AAIIVYDIT +++F +AKSW
Sbjct: 82 AAFMTQTVRLDDCTVKFEIWDTAGQERYRTLAPMYYRGSAAAIIVYDITLKESFNQAKSW 141
Query: 136 VKELQRMAPPNID-TFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEG 191
+KEL+ PNI W K L PP V + +P +R E+ EG
Sbjct: 142 IKELKSYVEPNIILVLIFISRWFKTL---LPPTTVCSWRLLPKLIPKGKRLHEFHEG 195
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQ-SSHSIS 341
I Q+KLV+LG++ VGKS LV RFV+ F E+QESTIGG + S+HS++
Sbjct: 31 IYQFKLVILGDTFVGKSCLVGRFVKNSFMEFQESTIGGTAKPSTHSLT 78
>gi|388583972|gb|EIM24273.1| GTP-binding protein ryh1 [Wallemia sebi CBS 633.66]
Length = 208
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 101/175 (57%), Gaps = 25/175 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F+++T+ LDD TIR ++WDTAGQER+ +L P Y R++ A++VYD++N+
Sbjct: 55 FLSKTMYLDDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNK----------- 103
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
+++ W++E+++ +++I L GNK DL S + V + + Y +
Sbjct: 104 ----------NSYDNTSKWIEEVKQERGDDVIIVLVGNKVDL--SEKEVNNDQVKEYCDN 151
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG--RRLVETAEAPKTSNC 250
NG+LF+ETSAK+ NV ++F IA LP E +N Q + V+ +A + S+C
Sbjct: 152 NGILFIETSAKSGFNVKQLFKRIALALPASEQDNSQNDNVKIQVDNQQADQQSSC 206
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++KLV LGE +VGK+SL+ RF+ F + ++TIG
Sbjct: 18 KFKLVFLGEQSVGKTSLITRFMYDTFDKTYQATIG 52
>gi|209880834|ref|XP_002141856.1| Ras family protein Rab-6A [Cryptosporidium muris RN66]
gi|209557462|gb|EEA07507.1| Ras family protein Rab-6A, putative [Cryptosporidium muris RN66]
Length = 220
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 22/159 (13%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
Y F+++T+ L+D TIR ++WDTAGQER+ +L P Y R++ A++VYDITN+ T+
Sbjct: 41 YQATIGIDFLSKTLYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRSTY 100
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
W+++++ R K +++IAL GNKADL +R V Y
Sbjct: 101 LNTTKWIEDVRNE---------RGK------------DVIIALVGNKADLD-DKRQVRYD 138
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
EGE A +N ++F+ETSAK N+ IF ++A LP E
Sbjct: 139 EGEKLANDNDIIFIETSAKNGYNIKSIFRKLASTLPTLE 177
>gi|195652409|gb|ACG45672.1| ras-related protein RHN1 [Zea mays]
gi|414869109|tpg|DAA47666.1| TPA: ras protein RHN1 isoform 1 [Zea mays]
gi|414869110|tpg|DAA47667.1| TPA: ras protein RHN1 isoform 2 [Zea mays]
Length = 125
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 90/148 (60%), Gaps = 29/148 (19%)
Query: 109 MYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNI 168
MYYR A AAI+VYDITN +F RAK WV+ELQ N
Sbjct: 1 MYYRGAAAAIVVYDITN---------------------AASFTRAKKWVQELQAQGNSNT 39
Query: 169 VIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK-K 227
++ALAGNKADL +R+ V E +AYA+ENGL FMETSAKTA NVN++F EIAKKL + +
Sbjct: 40 IVALAGNKADLLDTRQ-VSADEAKAYAQENGLFFMETSAKTATNVNDVFYEIAKKLLQGQ 98
Query: 228 EVNNGQGGRRLVETAEAPK----TSNCC 251
+V N QGG +V P+ +S+CC
Sbjct: 99 QVQNPQGG--MVLNQRPPERMVSSSSCC 124
>gi|28376635|ref|NP_783865.1| ras-related protein Rab-37 isoform 3 [Homo sapiens]
gi|26252126|gb|AAH40547.1| RAB37, member RAS oncogene family [Homo sapiens]
gi|119609586|gb|EAW89180.1| RAB37, member RAS oncogene family, isoform CRA_d [Homo sapiens]
gi|158261427|dbj|BAF82891.1| unnamed protein product [Homo sapiens]
Length = 216
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 106/192 (55%), Gaps = 32/192 (16%)
Query: 69 FYPYLFSA----AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDIT 124
F P FSA F + V +D V ++ +IWDTAGQER+ ++ YYR+AQA +++YDIT
Sbjct: 47 FIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDIT 106
Query: 125 NQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRR 184
N+ +F NI ++W+ E+ A ++VI L GNKAD+ +S R
Sbjct: 107 NKSSF---------------DNI------RAWLTEIHEYAQRDVVIMLLGNKADM-SSER 144
Query: 185 CVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG----RRLVE 240
+ +GE A E G+ F+ETSAKT MNV F+ IAK+L + + R VE
Sbjct: 145 VIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYVE 204
Query: 241 TAEAPKTSNCCN 252
+ + K S+CC+
Sbjct: 205 SQK--KRSSCCS 214
>gi|354491201|ref|XP_003507744.1| PREDICTED: ras-related protein Rab-2B-like [Cricetulus griseus]
gi|344252330|gb|EGW08434.1| Ras-related protein Rab-2B [Cricetulus griseus]
Length = 216
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 106/188 (56%), Gaps = 35/188 (18%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 94 ------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL-----VETAEAPK 246
+GL+FMETSAKTA NV E F+ AK++ +K +V+N G ++ + T+ P
Sbjct: 141 HGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSISTSAGPN 200
Query: 247 TS--NCCN 252
+S N C+
Sbjct: 201 SSQRNSCD 208
>gi|426346637|ref|XP_004040978.1| PREDICTED: ras-related protein Rab-37 isoform 2 [Gorilla gorilla
gorilla]
Length = 216
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 106/192 (55%), Gaps = 32/192 (16%)
Query: 69 FYPYLFSA----AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDIT 124
F P FSA F + V +D V ++ +IWDTAGQER+ ++ YYR+AQA +++YDIT
Sbjct: 47 FIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDIT 106
Query: 125 NQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRR 184
N+ +F NI ++W+ E+ A ++VI L GNKAD+ +S R
Sbjct: 107 NKSSF---------------DNI------RAWLTEIHEYAQRDVVIMLLGNKADM-SSER 144
Query: 185 CVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGG----RRLVE 240
+ +GE A E G+ F+ETSAKT MNV F+ IAK+L + + R VE
Sbjct: 145 VIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYVE 204
Query: 241 TAEAPKTSNCCN 252
+ + K S+CC+
Sbjct: 205 SQK--KRSSCCS 214
>gi|339237905|ref|XP_003380507.1| GTP-binding protein YPTC1 [Trichinella spiralis]
gi|316976620|gb|EFV59875.1| GTP-binding protein YPTC1 [Trichinella spiralis]
Length = 200
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 97/180 (53%), Gaps = 28/180 (15%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F +T+ LD TI+ +IWDTAGQER+ T+ YYR A I+VYDI++Q++F K W+
Sbjct: 43 FKIRTIDLDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDISDQESFNNVKQWLL 102
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
E++R A N++ L GNK+D T+ R VEY + YA++
Sbjct: 103 EIERYACENVNKL---------------------LVGNKSD-RTAERAVEYDTAKEYADQ 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRLVETAEAPKTSNCC 251
G+ F+ETSAK + NV + F+ +A ++ ++ Q G R+ T P+ S CC
Sbjct: 141 LGIPFLETSAKNSTNVEQAFLTMAGEIKRRLSHAVGTAAGAQPGVRITSTPVQPQKSGCC 200
>gi|440896346|gb|ELR48299.1| Ras-related protein Rab-17, partial [Bos grunniens mutus]
Length = 218
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 98/162 (60%), Gaps = 22/162 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V L ++FEIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 59 AFFTKVVDLGAACLKFEIWDTAGQEKYHSVCRLYFRGANAALLVYDITRKDSFCKAQQWL 118
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K+L+ + + P +V+ L GNK DL R V + EG+ +AE
Sbjct: 119 KDLE--------------------EELHPGEVVVMLVGNKTDLEEERE-VTFEEGKEFAE 157
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN-GQGGRR 237
GLLFMETSAK V ++F +A++L ++E + GQ RR
Sbjct: 158 SKGLLFMETSAKRNYQVADVFNAVARELSRREESKEGQRQRR 199
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 296 CQYKLVLLGESAVGKSSLVLRFVRGQF 322
C +KLVLLG +VGKSSL LR+V+ F
Sbjct: 23 CIFKLVLLGSGSVGKSSLALRYVKNDF 49
>gi|281205133|gb|EFA79326.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 253
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 111/213 (52%), Gaps = 40/213 (18%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D+ I+ +IWDTAGQE + ++ YYR + A++VYDIT ++TF W+
Sbjct: 42 FGARMISIDNKPIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRETFNHLTCWLS 101
Query: 138 ELQR-------MAPPN---------------IDTFGRAKSW---VKELQRMAPPNIVIAL 172
+ +R +APP I + + W V + + A N+ I L
Sbjct: 102 KYKRKQNNTLQLAPPQNHDNCVPHSNLHLTWISAQCQMRFWADDVDDARAFANSNMTIIL 161
Query: 173 AGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK----- 227
GNK+DL +R V Y EG +AEENGL+F+ETSAKTA NV E F+ AKK+ +K
Sbjct: 162 IGNKSDLE-QKRAVSYEEGAKFAEENGLIFLETSAKTAANVEEAFINTAKKIYEKIQKGD 220
Query: 228 -EVNNGQGGRRL------VETAEAP--KTSNCC 251
++ + G +L VE AP + S CC
Sbjct: 221 FDIKDETFGIKLGQPSNKVEIGAAPPAQKSGCC 253
>gi|225449603|ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|296086273|emb|CBI31714.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 39/198 (19%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ LD I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F ++W++ +++ A N++ L GNKAD+ S+R
Sbjct: 100 ESSFNNIRNWIRNIEQHASDNVNK---------------------VLVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGR--------- 236
V S+G+A A+E G+ F ETSAKT +NV E+F IAK + ++
Sbjct: 139 VPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAETDSKAEPQTIKINQP 198
Query: 237 -RLVETAEAPKTSNCCNT 253
+ +AP+ S CC +
Sbjct: 199 DQAANGGQAPQKSACCGS 216
>gi|15231847|ref|NP_190929.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|30693873|ref|NP_850696.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|145332825|ref|NP_001078278.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|297820096|ref|XP_002877931.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|75098184|sp|O24466.1|RAE1A_ARATH RecName: Full=Ras-related protein RABE1a; Short=AtRABE1a; AltName:
Full=Ras-related protein Rab8B; Short=AtRab8B
gi|2289961|gb|AAB65088.1| AtRAB8 [Arabidopsis thaliana]
gi|6729512|emb|CAB67668.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|21555222|gb|AAM63807.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|28466873|gb|AAO44045.1| At3g53610 [Arabidopsis thaliana]
gi|110736141|dbj|BAF00042.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|110740068|dbj|BAF01936.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|297323769|gb|EFH54190.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|332645595|gb|AEE79116.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645596|gb|AEE79117.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645597|gb|AEE79118.1| RAB GTPase-8 [Arabidopsis thaliana]
Length = 216
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 45/201 (22%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ LD I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F ++W++ +++ A +++ L GNKAD+ S+R
Sbjct: 100 ESSFNNIRNWIRNIEQHASDSVNKI---------------------LVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK-------------EVNNG 232
V S+G+A A+E G+ F ETSAKT +NV E+F IAK + ++ ++N
Sbjct: 139 VPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAEPQTIKINQS 198
Query: 233 QGGRRLVETAEAPKTSNCCNT 253
G T++A + S CC T
Sbjct: 199 DQG---AGTSQATQKSACCGT 216
>gi|255953207|ref|XP_002567356.1| Pc21g02920 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589067|emb|CAP95189.1| Pc21g02920 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 208
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 103/182 (56%), Gaps = 24/182 (13%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
Y F+++T+ L+D T+R ++WDTAGQER+ +L P Y R++ A++VYDI+N
Sbjct: 44 YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISN---- 99
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
AKS F + W+ +++ +++I L GNK DL +R V +
Sbjct: 100 --AKS---------------FQNTRKWIDDVRGERGNDVIIVLVGNKTDL-NDKREVTTA 141
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPK--T 247
+GE A++NGL+F+ETSAK NV ++F IA+ LP E QG +++ +PK T
Sbjct: 142 QGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEAKQGESTMIDVNISPKETT 201
Query: 248 SN 249
SN
Sbjct: 202 SN 203
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++KLV LGE +VGK+SL+ RF+ F ++TIG
Sbjct: 15 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIG 49
>gi|126644156|ref|XP_001388214.1| RAB6 protein [Cryptosporidium parvum Iowa II]
gi|126117287|gb|EAZ51387.1| RAB6 protein, putative [Cryptosporidium parvum Iowa II]
Length = 219
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 91/148 (61%), Gaps = 22/148 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F+++T+ L+D TIR ++WDTAGQER+ +L P Y R++ A++VYDITN+ TF W++
Sbjct: 49 FLSKTLYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRSTFLNTTKWIE 108
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
+++ R K +++I+L GNKADL RR V+Y E E A+E
Sbjct: 109 DVRN---------ERGK------------DVIISLIGNKADLE-DRRQVKYEEAEKLAQE 146
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLP 225
N ++F+ETSAK N+ +F ++A LP
Sbjct: 147 NNIMFIETSAKNGYNIKSLFKKLASTLP 174
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 287 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++ ++ +I ++K V LGE +VGK+S++ RF+ F ++TIG
Sbjct: 2 ADNSSRNQISKFKFVFLGEQSVGKTSIITRFMYDTFDNNYQATIG 46
>gi|425767204|gb|EKV05779.1| hypothetical protein PDIP_81350 [Penicillium digitatum Pd1]
gi|425769088|gb|EKV07595.1| hypothetical protein PDIG_72080 [Penicillium digitatum PHI26]
Length = 209
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 25/185 (13%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
Y F+++T+ L+D T+R ++WDTAGQER+ +L P Y R++ A++VYDI+N
Sbjct: 45 YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISN---- 100
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
AKS F + W+ +++ +++I L GNK DL +R V +
Sbjct: 101 --AKS---------------FQNTRKWIDDVRGERGNDVIIVLVGNKTDL-NDKREVTTA 142
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPK--- 246
+GE A++NGL+F+ETSAK NV ++F IA+ LP E QG +++ +PK
Sbjct: 143 QGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEAKQGESTMIDVNISPKETT 202
Query: 247 TSNCC 251
T++ C
Sbjct: 203 TNDGC 207
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++KLV LGE +VGK+SL+ RF+ F ++TIG
Sbjct: 16 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIG 50
>gi|10946940|ref|NP_067493.1| ras-related protein Rab-2A [Mus musculus]
gi|1709998|sp|P53994.1|RAB2A_MOUSE RecName: Full=Ras-related protein Rab-2A
gi|1177547|emb|CAA64684.1| GTP-binding protein [Mus musculus]
gi|26347751|dbj|BAC37524.1| unnamed protein product [Mus musculus]
gi|74137386|dbj|BAE35742.1| unnamed protein product [Mus musculus]
gi|74183144|dbj|BAE22525.1| unnamed protein product [Mus musculus]
gi|74194509|dbj|BAE37298.1| unnamed protein product [Mus musculus]
gi|74198093|dbj|BAE35226.1| unnamed protein product [Mus musculus]
gi|74211806|dbj|BAE29254.1| unnamed protein product [Mus musculus]
gi|74222313|dbj|BAE26957.1| unnamed protein product [Mus musculus]
gi|112292939|dbj|BAF02847.1| Rab2A [Mus musculus]
gi|148673733|gb|EDL05680.1| RAB2, member RAS oncogene family [Mus musculus]
Length = 212
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 101/181 (55%), Gaps = 28/181 (15%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 92
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF +W+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 93 -----------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRLVETAEAPKTSNCC 251
+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++ A S+
Sbjct: 141 HGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNASHGS 200
Query: 252 N 252
N
Sbjct: 201 N 201
>gi|388581691|gb|EIM21998.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 204
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 96/161 (59%), Gaps = 26/161 (16%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+TQ + + + I+FEIWDTAGQERY +LAPMYYR A AA++VY + ++D+ RA W
Sbjct: 41 AAFLTQQMKIAEDLIKFEIWDTAGQERYKSLAPMYYRYAHAALVVYSVGSKDSLDRAVKW 100
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
++EL+R A N +I LAGNK+D+P + + V S+ E
Sbjct: 101 ---------------------IEELKRQADSNTIIILAGNKSDIPDNTKQVANSDVEKLC 139
Query: 196 EENGLLFMET-SAKTAMNVNEIFVEIAKKLP----KKEVNN 231
EE + + T SAK+ +NE+F++I + LP K ++NN
Sbjct: 140 EELDVSYHATCSAKSGAGINELFLKIGQLLPIQQAKDKLNN 180
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+KLVLLGESAVGKSS+VLRFV+ QF E +ESTIG
Sbjct: 7 FKLVLLGESAVGKSSIVLRFVKQQFAEDRESTIGA 41
>gi|344291198|ref|XP_003417323.1| PREDICTED: ras-related protein Rab-37-like [Loxodonta africana]
Length = 216
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 107/190 (56%), Gaps = 28/190 (14%)
Query: 69 FYPYLFSA----AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDIT 124
F P FSA F + V +D V ++ +IWDTAGQER+ ++ YYR+AQA +++YDIT
Sbjct: 47 FIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDIT 106
Query: 125 NQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRR 184
N+ +F NI ++W+ E+ A ++VI L GNKAD+ +S R
Sbjct: 107 NKSSF---------------DNI------RAWLTEINEYAQRDVVIMLLGNKADV-SSER 144
Query: 185 CVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP-KKEVNNGQGGRRLVETAE 243
+ +GE A E G+ FMETSAKT MNV F+ IAK+L + G+ ++ + E
Sbjct: 145 EIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRARQQAGEPSFQIRDYVE 204
Query: 244 A-PKTSNCCN 252
+ K S+CC+
Sbjct: 205 SQKKRSSCCS 214
>gi|355563906|gb|EHH20406.1| A-kinase anchor protein 3 [Macaca mulatta]
Length = 979
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 82/124 (66%), Gaps = 22/124 (17%)
Query: 109 MYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNI 168
MY R AQ AI+VYDITN+++F K+W + ELQR A P+I
Sbjct: 1 MYCRGAQTAIVVYDITNEESFASVKNWAE---------------------ELQRQACPDI 39
Query: 169 VIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
VIAL+GNKADL ++R V++ E + YA++N LLFM+TSAKT+MNVNE+F+ IAKKLP+ E
Sbjct: 40 VIALSGNKADL-ANKRAVDFQEAQPYADDNSLLFMKTSAKTSMNVNEMFMAIAKKLPENE 98
Query: 229 VNNG 232
N
Sbjct: 99 PRNA 102
>gi|357154071|ref|XP_003576660.1| PREDICTED: ras-related protein RABB1c-like [Brachypodium
distachyon]
Length = 209
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 88/150 (58%), Gaps = 20/150 (13%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F ++ V +D+ I+ IWDTAGQE + ++ YYR A AA++VYDIT ++TF SW++
Sbjct: 43 FGSRMVTIDNRKIKLHIWDTAGQEAFRSITRSYYRGAAAALLVYDITRRETFSHLTSWLE 102
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
E++++A N NI I L GNK DL RR V EGE +A+E
Sbjct: 103 EMRQLADGN-------------------NNITIVLVGNKLDLE-QRRAVSTEEGEQFAKE 142
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
NGL F+ETSA+T NV+E FV+ A + K
Sbjct: 143 NGLAFIETSARTRHNVDEAFVKTASAVYHK 172
>gi|339237897|ref|XP_003380503.1| GTP-binding protein YPTC1 [Trichinella spiralis]
gi|316976629|gb|EFV59881.1| GTP-binding protein YPTC1 [Trichinella spiralis]
Length = 197
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 97/180 (53%), Gaps = 28/180 (15%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F +T+ LD TI+ +IWDTAGQER+ T+ YYR A I+VYDI++Q++F K W+
Sbjct: 40 FKIRTIDLDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDISDQESFNNVKQWLL 99
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
E++R A N++ L GNK+D T+ R VEY + YA++
Sbjct: 100 EIERYACENVNKL---------------------LVGNKSDR-TAERAVEYDTAKEYADQ 137
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRLVETAEAPKTSNCC 251
G+ F+ETSAK + NV + F+ +A ++ ++ Q G R+ T P+ S CC
Sbjct: 138 LGIPFLETSAKNSTNVEQAFLTMAGEIKRRLSHAVGTAAGAQPGVRITSTPVQPQKSGCC 197
>gi|145349021|ref|XP_001418939.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579169|gb|ABO97232.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 102/179 (56%), Gaps = 28/179 (15%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F+++T+ L+D T+R ++WDTAGQER+ +L P Y R++ A+IVYD++++ +F + W+
Sbjct: 50 FLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVSSRASFVNSAKWIS 109
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
E++ +R +++IAL GNK DL R V +EGEA A+E
Sbjct: 110 EVK-------------------AERGG--DVIIALVGNKTDLDG--REVSAAEGEAKAKE 146
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVET-----AEAPKTSNCC 251
G++F+ETSAK NV +F +IA LP E + + LVE A+ S+CC
Sbjct: 147 EGVMFIETSAKAGFNVKVLFRKIAAALPGMETPSTKADEDLVEVKLTGQAQQSAKSSCC 205
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+YKLV LG+ +VGK+S++ RF+ +F ++TIG
Sbjct: 13 KYKLVFLGDQSVGKTSIISRFMYDKFDNSYQATIG 47
>gi|357017139|gb|AET50598.1| hypothetical protein [Eimeria tenella]
Length = 207
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 22/163 (13%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F+++T+ L+D T+R ++WDTAGQER+ +L P Y R++ AA++VYDITN+ +F W++
Sbjct: 46 FLSKTLYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSAAVVVYDITNRASFINTTKWIE 105
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
++ W + ++VIAL GNK DL + RR V EGE A E
Sbjct: 106 DV----------------WAER-----GKDVVIALVGNKTDL-SDRRQVSPEEGEQKARE 143
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVE 240
G+LF+ETSAK NV +F ++A LP E ++V+
Sbjct: 144 QGILFIETSAKAGHNVKTLFRKLAAALPGLETQQSASDAQMVD 186
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 293 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
A + +YKLV LGE AVGK+S++ RF+ F ++TIG
Sbjct: 5 AGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQATIG 43
>gi|449440016|ref|XP_004137781.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 45/201 (22%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ LD I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F ++W++ +++ A N++ L GNKAD+ S+R
Sbjct: 100 ESSFNNIRNWIRNIEQHASDNVNKI---------------------LVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK-------------EVNNG 232
V S+G+A A+E G+ F ETSAKT +NV E+F IAK + ++ ++N
Sbjct: 139 VPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLSDSDSKSEPQTIKINQA 198
Query: 233 QGGRRLVETAEAPKTSNCCNT 253
G +TA+ S CC +
Sbjct: 199 DNGAGASQTAQK---SACCGS 216
>gi|392864275|gb|EAS34901.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 209
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 100/176 (56%), Gaps = 22/176 (12%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
Y F+++T+ L+D T+R ++WDTAGQER+ +L P Y R++ A++VYDI+N
Sbjct: 45 YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISN---- 100
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
AKS F + WV +++ +++I L GNK DL +R V +
Sbjct: 101 --AKS---------------FQNTRKWVDDVRGERGNDVIIVLVGNKTDL-NDKREVTTA 142
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
+GE A++NGL+F+ETSAK NV ++F IA+ LP E G+G ++++ P
Sbjct: 143 QGEEEAKKNGLMFIETSAKVGYNVKQLFRRIAQALPGMEGEAGRGDNQMIDVNINP 198
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++KLV LGE +VGK+SL+ RF+ F ++TIG
Sbjct: 16 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIG 50
>gi|221121860|ref|XP_002155452.1| PREDICTED: ras-related protein Rab-2-like [Hydra magnipapillata]
Length = 212
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 102/178 (57%), Gaps = 30/178 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 92
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF +W+++ ++ + N+VI L GNK+DL +RR V+ EGEA+A E
Sbjct: 93 -----------TFNHLTTWLEDARQHSSSNMVIMLIGNKSDLE-ARREVKKEEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL--VETAEAPKT 247
+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++ T+ +P T
Sbjct: 141 HGLIFMETSAKTAANVEEAFIGTAKEIYQKIQEGVFDINNEANGIKIGPQHTSSSPST 198
>gi|26892279|gb|AAN86142.1|AF468652_1 RAB2B [Homo sapiens]
Length = 216
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 22/150 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 94 ------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 141 HGLIFMETSAKTACNVEEAFINTAKEIHRK 170
>gi|149054742|gb|EDM06559.1| rCG35079, isoform CRA_a [Rattus norvegicus]
Length = 216
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 105/192 (54%), Gaps = 32/192 (16%)
Query: 69 FYPYLFSA----AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDIT 124
F P FSA F + V +D ++ +IWDTAGQER+ ++ YYR+AQA +++YDIT
Sbjct: 47 FIPGSFSATVGIGFTNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDIT 106
Query: 125 NQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRR 184
NQ +F ++W+ E+ A QR ++VI L GNKAD+ +S R
Sbjct: 107 NQSSFDNIRAWLTEIHEYA-----------------QR----DVVIMLLGNKADV-SSER 144
Query: 185 CVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP----KKEVNNGQGGRRLVE 240
+ +GE A E G+ FMETSAKT MNV F+ IAK+L K+ R VE
Sbjct: 145 VIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGKQPDEPSFQIRDYVE 204
Query: 241 TAEAPKTSNCCN 252
+ + K S+CC+
Sbjct: 205 SQK--KRSSCCS 214
>gi|145251179|ref|XP_001397103.1| Ras-related protein Rab-6A [Aspergillus niger CBS 513.88]
gi|134082633|emb|CAK42527.1| unnamed protein product [Aspergillus niger]
gi|350636440|gb|EHA24800.1| hypothetical protein ASPNIDRAFT_40721 [Aspergillus niger ATCC 1015]
gi|358373872|dbj|GAA90468.1| secretion related GTPase C [Aspergillus kawachii IFO 4308]
Length = 209
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 104/185 (56%), Gaps = 25/185 (13%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
Y F+++T+ L+D T+R ++WDTAGQER+ +L P Y R++ A++VYDI+N
Sbjct: 45 YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISN---- 100
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
AKS F + W+ +++ +++I L GNK DL +R V +
Sbjct: 101 --AKS---------------FQNTRKWIDDVRGERGNDVIIVLVGNKTDL-NDKREVTTA 142
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPK--- 246
+GE A++NGL+F+ETSAK NV ++F IA+ LP E +G ++++ PK
Sbjct: 143 QGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEANRGDNQMIDVNITPKETT 202
Query: 247 TSNCC 251
T++ C
Sbjct: 203 TNDGC 207
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++KLV LGE +VGK+SL+ RF+ F ++TIG
Sbjct: 16 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIG 50
>gi|414869112|tpg|DAA47669.1| TPA: putative GTP-binding protein [Zea mays]
Length = 140
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 75/119 (63%), Gaps = 21/119 (17%)
Query: 67 VVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQ 126
V F AAF +QT+ ++D T++FEIWDTAGQERYH+LAPMYYR A AAI+VYDITN
Sbjct: 38 VEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNA 97
Query: 127 DTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+F RAK WV+ELQ A N N ++ALAGNKADL +R+
Sbjct: 98 ASFTRAKKWVQELQ--AQGN-------------------SNTIVALAGNKADLLDTRQV 135
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 9 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIG 46
>gi|395851548|ref|XP_003798315.1| PREDICTED: ras-related protein Rab-17 [Otolemur garnettii]
Length = 313
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 88/145 (60%), Gaps = 21/145 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
AF T+ V L +++ EIWDTAGQE+YH++ +Y+R A AA++VYDIT +D+F +A+ W+
Sbjct: 54 AFFTKVVELGVSSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFHKAQQWL 113
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
++L++ PP +V+ L GNK DL + R V + EG+ +AE
Sbjct: 114 QDLEKEFPPG--------------------EVVVMLVGNKTDL-SEEREVTFEEGQEFAE 152
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIA 221
LLFMETSAK V+E+F +A
Sbjct: 153 SKRLLFMETSAKLNHQVSEVFSAVA 177
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 296 CQYKLVLLGESAVGKSSLVLRFVRGQF 322
C +KLVLLG +VGKSSL LR+V+ F
Sbjct: 18 CVFKLVLLGSGSVGKSSLALRYVKDDF 44
>gi|147900614|ref|NP_001090137.1| RAB2A, member RAS oncogene family [Xenopus laevis]
gi|83318436|gb|AAI08552.1| MGC131016 protein [Xenopus laevis]
Length = 228
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 102/168 (60%), Gaps = 13/168 (7%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW-V 136
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT G A + V
Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRSYYRGAAGALLV 102
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
++ R DTF +W+++ ++ + N+VI L NK+DL SRR V+ EGEA+A
Sbjct: 103 YDITRR-----DTFNHLTTWLEDARQHSNSNMVIMLIANKSDLE-SRREVKKEEGEAFAR 156
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
E+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++
Sbjct: 157 EHGLVFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKI 204
>gi|395502994|ref|XP_003755858.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Sarcophilus
harrisii]
Length = 216
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 97/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 94 ------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F+ AK++ +K +VNN G ++
Sbjct: 141 HGLIFMETSAKTASNVEEAFINTAKEIYRKIQQGLFDVNNEANGIKI 187
>gi|326432232|gb|EGD77802.1| rab family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 197
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 101/183 (55%), Gaps = 27/183 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+ + + L+ + IWDTAGQE++H L P+YYRN+ A++VYDIT+QD+F + K
Sbjct: 37 LQASFLKKKINLNQQRVELAIWDTAGQEKFHALGPIYYRNSHGAVLVYDITDQDSFQKVK 96
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
+W V+EL++M NI + + GNK+DL +R V+ +E EA
Sbjct: 97 NW---------------------VRELKKMLGSNIALTICGNKSDLE-RQRTVDQAEAEA 134
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRR---LVETAEAPKTSN- 249
YA G +TSA+ ++E+F+++AK+L ++ + R LVE + S
Sbjct: 135 YAASVGAKHFQTSARLNRGIDEMFLDLAKRLVQQGAKAPKAQSRVSVLVEDDDVQPDSKG 194
Query: 250 -CC 251
CC
Sbjct: 195 GCC 197
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 330
Q+K+VLLGE VGK+S+VLR+ + F+E ST+
Sbjct: 4 QFKIVLLGEGCVGKTSIVLRYCQQTFNENHVSTL 37
>gi|18447915|dbj|BAB84323.1| ras-related protein RAB8-2 [Nicotiana tabacum]
gi|18447919|dbj|BAB84325.1| ras-related protein RAB8-4 [Nicotiana tabacum]
Length = 216
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 93/162 (57%), Gaps = 29/162 (17%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ LD I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F ++W++ +++ A N++ L GNKAD+ S+R
Sbjct: 100 ESSFNNIRNWIRNIEQHASDNVNKI---------------------LVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
V S+G+A A+E G+ F ETSAKT MNV E+F IA+ + ++
Sbjct: 139 VPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180
>gi|440791435|gb|ELR12673.1| Ras subfamily Rab protein [Acanthamoeba castellanii str. Neff]
Length = 256
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 115/214 (53%), Gaps = 21/214 (9%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A F + + +DDV I+ +IWDTAGQER+ ++APMYYR A AA++VYDIT+ +F K W
Sbjct: 56 AGFANKRIVMDDVKIKLQIWDTAGQERFRSMAPMYYRGAVAAVLVYDITSVSSFHAVKGW 115
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
+KEL A + D L+RMA I +AGNK DL R V + AYA
Sbjct: 116 IKELNEAAMQDGD-----------LRRMA-----IGIAGNKKDLEADRE-VSTKDATAYA 158
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQG---GRRLVETAEAPKTSNCCN 252
+ G ++ETSA ++++F+ + +++ + + G+G G E+ +A +
Sbjct: 159 DSIGAFYIETSALANEGLDDLFMGLCRRILGDKGSKGKGEGAGDNKGESLDARRNRTASK 218
Query: 253 TQFVQCKYKSSIHILTMANSNNSNSNGRGGRIQR 286
T + K +I L +N+++ +G + +R
Sbjct: 219 TGQQKTPRKETIK-LEAPQTNHTDKHGSHEKTKR 251
>gi|147902722|ref|NP_001085321.1| rab2b, member RAS oncogene family [Xenopus laevis]
gi|49257196|gb|AAH71068.1| MGC78967 protein [Xenopus laevis]
gi|83318342|gb|AAI08769.1| MGC78967 protein [Xenopus laevis]
Length = 215
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 95/164 (57%), Gaps = 28/164 (17%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMINIDGKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V EGEA+A E
Sbjct: 94 ------------FSHLTSWLEDARQHSSSNMVIILIGNKSDLE-SRRDVSREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGG 235
+GL+FMETSAKT+ NV E F++ AK++ KK +VNN G
Sbjct: 141 HGLIFMETSAKTSANVEEAFIDTAKEIYKKIQQGLFDVNNEANG 184
>gi|149692180|ref|XP_001505211.1| PREDICTED: ras-related protein Rab-2B-like [Equus caballus]
gi|335775161|gb|AEH58479.1| Ras-related protein Rab-2B-like protein [Equus caballus]
Length = 216
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 22/150 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 94 ------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 141 HGLIFMETSAKTACNVEEAFINTAKEIYRK 170
>gi|254939635|ref|NP_001157225.1| ras-related protein Rab-37 isoform 2 [Mus musculus]
gi|26337951|dbj|BAC32661.1| unnamed protein product [Mus musculus]
gi|148702511|gb|EDL34458.1| RAB37, member of RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 104/196 (53%), Gaps = 40/196 (20%)
Query: 69 FYPYLFSA----AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDIT 124
F P FSA F + V +D ++ +IWDTAGQER+ ++ YYR+AQA +++YDIT
Sbjct: 47 FIPGSFSATVGIGFTNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDIT 106
Query: 125 NQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRR 184
NQ +F ++W+ E+ A QR ++VI L GNKAD+ +S R
Sbjct: 107 NQSSFDNIRAWLTEIHEYA-----------------QR----DVVIMLLGNKADV-SSER 144
Query: 185 CVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETA-- 242
+ +GE A E G+ FMETSAKT MNV F+ IAK+L + GR+ E +
Sbjct: 145 VIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYR------AGRQPDEPSFQ 198
Query: 243 ------EAPKTSNCCN 252
K S+CC+
Sbjct: 199 IRDYVESQKKRSSCCS 214
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 100/182 (54%), Gaps = 30/182 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F +TV L+ T++ +IWDTAGQER+ T+ YYR A I+VYD+T+Q++F K W+
Sbjct: 45 FKIRTVDLEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLN 104
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
E+ R A N++ L GNK+DL T+++ V+Y +A+A+E
Sbjct: 105 EIDRYANENVNKL---------------------LVGNKSDL-TAKKVVDYQTAKAFADE 142
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK-----EVNNGQGGRRLVETAEAP---KTSN 249
G+ F+ETSAK A NV E F+++A ++ + +NNG G + P SN
Sbjct: 143 IGIPFLETSAKNATNVEEAFMKMAGEIKNRMASQPALNNGPKGATVRPGEGRPVNANKSN 202
Query: 250 CC 251
CC
Sbjct: 203 CC 204
>gi|308044223|ref|NP_001183904.1| uncharacterized protein LOC100502497 [Zea mays]
gi|238015358|gb|ACR38714.1| unknown [Zea mays]
Length = 214
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 47/201 (23%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +TV LD I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F ++W++ +++ A N++ L GNKAD+ S+R
Sbjct: 100 ESSFNNIRNWIRNIEQHASDNVNKI---------------------LVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK-------------EVNNG 232
V S+G+A A+E G+ F ETSAKT +NV ++F IA+ + ++ +N
Sbjct: 139 VPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLSESDSKPEDRTISINRP 198
Query: 233 QGGRRLVETAEAPKTSNCCNT 253
GG A A + S CC +
Sbjct: 199 DGGE-----ASASQKSACCGS 214
>gi|326432225|gb|EGD77795.1| Rab5c [Salpingoeca sp. ATCC 50818]
Length = 198
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 101/177 (57%), Gaps = 20/177 (11%)
Query: 76 AAFITQTVCL-DDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
AAF+++ V L + I+ EIWDTAGQERY +LAPMYYR AQ AI+V+DIT D+F A+
Sbjct: 41 AAFLSKVVDLPNSRQIKLEIWDTAGQERYRSLAPMYYRGAQGAIVVFDITQHDSFASARE 100
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
W+KEL W + P ++ L GNK D ++ R V ++ +A+
Sbjct: 101 WIKEL----------------WSHTEEDKEKP--LVVLVGNKVD-KSNERQVNPADVQAF 141
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCC 251
+ N + +METSAKTA+N + +F IA++L K+ ++ V+ + + CC
Sbjct: 142 TQANNITYMETSAKTAVNTSRVFEYIAEELVKRRASSDSDDDTSVDLDQPQSSGGCC 198
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
KLVLLG S VGKSSLVLRFVR +F ++ E T+G
Sbjct: 8 KLVLLGASGVGKSSLVLRFVRDEFRDHHEITVGA 41
>gi|325094335|gb|EGC47645.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 209
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 31/194 (15%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYY 111
++ D D M Q I + F+++T+ L+D T+R ++WDTAGQER+ +L P Y
Sbjct: 36 FMYDSFDNMYQATIGI---------DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 86
Query: 112 RNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIA 171
R++ A++VYDI+N AKS F + WV +++ +++I
Sbjct: 87 RDSSVAVVVYDISN------AKS---------------FQNTRKWVDDVRGERGNDVIIV 125
Query: 172 LAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNN 231
L GNK DL +R V ++GE A+++GL+F+ETSAK NV ++F IA+ LP + +
Sbjct: 126 LVGNKTDL-NDKREVTTAQGEEEAKKHGLMFIETSAKVGHNVKQLFRRIAQALPGMDDDA 184
Query: 232 GQGGRRLVETAEAP 245
G+G ++++ P
Sbjct: 185 GRGANQMIDVNINP 198
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++KLV LGE +VGK+SL+ RF+ F ++TIG
Sbjct: 16 KFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIG 50
>gi|349580845|dbj|GAA26004.1| K7_Ypt53p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 220
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 93/163 (57%), Gaps = 26/163 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+T+ + D I+FEIWDTAGQER+ LAPMYYRNAQAA++V+D+TN+ +F +A++W
Sbjct: 47 AAFLTKRITRDGKVIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-----PTSRRCVEYSE 190
V+EL + G +IVIAL GNK DL R +E
Sbjct: 107 VEELH-------EKVGH--------------DIVIALVGNKMDLLNNDDENENRAMEAPA 145
Query: 191 GEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ 233
+ + LL+ E SAKT N+ +IF + +K+P E N Q
Sbjct: 146 VQNLCDRENLLYFEASAKTGENIYQIFQTLGEKVPCPEQNTRQ 188
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K+VLLGESAVGKSS+VLRFV F E +E TIG
Sbjct: 14 KVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGA 47
>gi|344273111|ref|XP_003408370.1| PREDICTED: ras-related protein Rab-2A-like [Loxodonta africana]
Length = 188
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 19 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 68
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF +W+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 69 -----------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGEAFARE 116
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++
Sbjct: 117 HGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKI 163
>gi|355714890|gb|AES05151.1| RAB2B, member RAS oncoprotein family [Mustela putorius furo]
Length = 220
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 22/150 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 48 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 98
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 99 ------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVKREEGEAFARE 145
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 146 HGLIFMETSAKTACNVEEAFINTAKEIYRK 175
>gi|431898744|gb|ELK07121.1| Ras-related protein Rab-2B [Pteropus alecto]
Length = 216
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 22/150 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 94 ------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 141 HGLIFMETSAKTACNVEEAFINTAKEIYRK 170
>gi|451856251|gb|EMD69542.1| hypothetical protein COCSADRAFT_78453 [Cochliobolus sativus ND90Pr]
gi|452003327|gb|EMD95784.1| hypothetical protein COCHEDRAFT_1087944 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 25/186 (13%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
Y F+++T+ L+D T+R ++WDTAGQER+ +L P Y R++ A++VYDITN+ TF
Sbjct: 41 YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNKKTF 100
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
+ WV ++ R N +++I L GNK DL +R V +
Sbjct: 101 ENTRKWVDDV-RGERGN--------------------DVIIVLVGNKTDL-NDKREVTTA 138
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVET---AEAPK 246
+GE A++N L+F+ETSAK NV +F IA+ LP E QG ++++ P
Sbjct: 139 QGEEEAKKNNLMFIETSAKVGHNVKALFKRIAQALPGMEGEGQQGQSQMIDVNINPSQPA 198
Query: 247 TSNCCN 252
N C+
Sbjct: 199 QENSCS 204
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+ ++KLV LGE +VGK+SL+ RF+ F ++TIG
Sbjct: 10 LKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIG 46
>gi|168033669|ref|XP_001769337.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679443|gb|EDQ65891.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 39/194 (20%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ LD+ I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 38 FTTSFITTIGIDFKIRTIELDNKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 97
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F ++W++ +++ A N++ L GNKAD+ S+R
Sbjct: 98 ESSFNNIRNWIRNIEQHASDNVNKI---------------------LVGNKADMDPSKRA 136
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
V +++G+A A+E G+ F ETSAKT MNV ++F IA+ + RL E+ P
Sbjct: 137 VPFAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKT----------RLAESDSKP 186
Query: 246 KTSNCCNTQFVQCK 259
+ N V K
Sbjct: 187 EAKNAGGKPDVTLK 200
>gi|432915657|ref|XP_004079196.1| PREDICTED: ras-related protein Rab-2A-like [Oryzias latipes]
Length = 212
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 92
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF +W+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 93 -----------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++
Sbjct: 141 HGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKI 187
>gi|256084269|ref|XP_002578353.1| rab-2414 [Schistosoma mansoni]
gi|360045234|emb|CCD82782.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 213
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 97/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +DD I+ +IWDTAGQE + ++ YYR A A++VYDIT +
Sbjct: 43 FGARMINIDDKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR----------- 91
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
+TF +W+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 92 ----------ETFTHLTTWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVQKEEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV + F++ AK + K +VNN G +L
Sbjct: 141 HGLIFMETSAKTAANVEDAFIDTAKCIHGKIQEGVLDVNNEANGIKL 187
>gi|256071246|ref|XP_002571952.1| rab-2414 [Schistosoma mansoni]
gi|238657101|emb|CAZ28182.1| rab-2,4,14, putative [Schistosoma mansoni]
Length = 225
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 87/154 (56%), Gaps = 22/154 (14%)
Query: 71 PYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFG 130
P+ F T+ + ++D ++ +IWDTAGQER+ + YYR A A++VYDIT + TF
Sbjct: 42 PHTIGVEFSTKIIEVNDQKVKIQIWDTAGQERFRAVTRSYYRGASGALLVYDITRKPTFN 101
Query: 131 RAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSE 190
R ++W + + +R+ PN VI L GNKADL +R V Y E
Sbjct: 102 RIQTW---------------------LTDARRLTSPNTVIFLIGNKADLE-EQRDVTYEE 139
Query: 191 GEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
+ A+ENGLLF+E SAK+ NV +F E A+K+
Sbjct: 140 AKQLADENGLLFLECSAKSGANVENVFTETARKI 173
>gi|311266846|ref|XP_003131277.1| PREDICTED: ras-related protein Rab-37-like isoform 3 [Sus scrofa]
Length = 216
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 26/160 (16%)
Query: 69 FYPYLFSA----AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDIT 124
F P FSA F + V +D V ++ +IWDTAGQER+ ++ YYR+AQA +++YDIT
Sbjct: 47 FIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDIT 106
Query: 125 NQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRR 184
N+ +F NI ++W+ E+ A ++VI L GNKAD+ +S R
Sbjct: 107 NKSSF---------------DNI------RAWLTEIHEYAQRDVVIMLLGNKADV-SSER 144
Query: 185 CVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
+ +GE A E G+ FMETSAKT MNV F+ IAK+L
Sbjct: 145 VIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKEL 184
>gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum]
Length = 216
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 106/204 (51%), Gaps = 51/204 (25%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ LD I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F ++W++ +++ A N++ L GNKAD+ S+R
Sbjct: 100 ESSFNNIRNWIRNIEQHASDNVNKI---------------------LVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK--EVNN------------ 231
V S+G+A A+E G+ F ETSAKT MNV E+F IA+ + ++ E +N
Sbjct: 139 VPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDNRAEPQTIRINQP 198
Query: 232 --GQGGRRLVETAEAPKTSNCCNT 253
G GG A+ + S CC +
Sbjct: 199 DQGAGG------AQTAQKSACCGS 216
>gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 93/162 (57%), Gaps = 29/162 (17%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ LD I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F ++W++ +++ A N++ L GNKAD+ S+R
Sbjct: 100 ESSFNNIRNWIRNIEQHASDNVNKI---------------------LVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
V S+G+A A+E G+ F ETSAKT MNV E+F IA+ + ++
Sbjct: 139 VPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180
>gi|297297438|ref|XP_001096730.2| PREDICTED: ras-related protein Rab-2B-like [Macaca mulatta]
Length = 190
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 22/150 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 94 ------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 141 HGLIFMETSAKTACNVEEAFINTAKEIYRK 170
>gi|397475361|ref|XP_003809108.1| PREDICTED: ras-related protein Rab-2A [Pan paniscus]
Length = 176
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 7 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 56
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF +W+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 57 -----------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGEAFARE 104
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++
Sbjct: 105 HGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKI 151
>gi|426238492|ref|XP_004013187.1| PREDICTED: ras-related protein Rab-37 [Ovis aries]
Length = 216
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 26/160 (16%)
Query: 69 FYPYLFSA----AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDIT 124
F P FSA F + V +D V ++ +IWDTAGQER+ ++ YYR+AQA +++YDIT
Sbjct: 47 FVPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDIT 106
Query: 125 NQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRR 184
N+ +F NI ++W+ E+ A ++VI L GNKAD+ +S R
Sbjct: 107 NKSSF---------------DNI------RAWLTEIHEYAQRDVVIMLLGNKADV-SSER 144
Query: 185 CVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
+ +GE A E G+ FMETSAKT MNV F+ IAK+L
Sbjct: 145 VIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKEL 184
>gi|402875596|ref|XP_003901586.1| PREDICTED: ras-related protein Rab-2B [Papio anubis]
gi|355693102|gb|EHH27705.1| hypothetical protein EGK_17973 [Macaca mulatta]
gi|355778380|gb|EHH63416.1| hypothetical protein EGM_16382 [Macaca fascicularis]
gi|380817346|gb|AFE80547.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
gi|383422287|gb|AFH34357.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
gi|384949918|gb|AFI38564.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
Length = 216
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 22/150 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 94 ------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 141 HGLIFMETSAKTACNVEEAFINTAKEIYRK 170
>gi|355779713|gb|EHH64189.1| hypothetical protein EGM_17348, partial [Macaca fascicularis]
Length = 198
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 29 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 78
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF +W+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 79 -----------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGEAFARE 126
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++
Sbjct: 127 HGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKI 173
>gi|363807324|ref|NP_001242369.1| uncharacterized protein LOC100775804 [Glycine max]
gi|255647140|gb|ACU24038.1| unknown [Glycine max]
Length = 214
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 46/199 (23%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ LD I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F ++W++ +++ A N++ L GNKAD+ S+R
Sbjct: 100 EASFNNIRNWIRNIEQHASDNVNKI---------------------LVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK-------------EVNNG 232
V S+G+A A+E G+ F ETSAKT +NV E+F IA+ + ++ ++N
Sbjct: 139 VPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPSTIKINQD 198
Query: 233 QGGRRLVETAEAPKTSNCC 251
Q G +A + S CC
Sbjct: 199 QSG----GAGQAAQKSACC 213
>gi|294460994|gb|ADE76067.1| unknown [Picea sitchensis]
Length = 209
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 106/186 (56%), Gaps = 31/186 (16%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
A+++T+ + ++ V + IWDTAGQER+H L P+YYR+A AA++VYDI ++D+F R ++W
Sbjct: 46 ASYLTKRLNINGVVVTLSIWDTAGQERFHALGPIYYRDADAALLVYDIMDKDSFTRVRNW 105
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
V KEL++MA +I++A+A NK+DL S++ ++ E E YA
Sbjct: 106 V---------------------KELRQMASKDIILAIAANKSDLVRSQK-IDLQEAERYA 143
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIA------KKLPKKEVNNGQGGRRLV---ETAEAPK 246
G TSAK + ++F++I +K +E ++ Q + +V E E+P
Sbjct: 144 ASIGAKHFVTSAKLNTGIEQVFLDITTRALEKRKSSMEEFSSIQKRKGMVIVDEQPESPP 203
Query: 247 TSNCCN 252
S CC+
Sbjct: 204 QSKCCS 209
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 330
+KLVLLG+ VGK+SLVLR+V F + Q +T+
Sbjct: 12 FKLVLLGDGRVGKTSLVLRYVDDVFSDSQTATV 44
>gi|398364899|ref|NP_014306.3| Ypt53p [Saccharomyces cerevisiae S288c]
gi|549797|sp|P36019.1|YPT53_YEAST RecName: Full=GTP-binding protein YPT53
gi|19880864|gb|AAM00516.1|AF458969_1 YPT53 [Saccharomyces cerevisiae]
gi|19880871|gb|AAM00522.1|AF458970_1 YPT53 [Saccharomyces cerevisiae]
gi|19880878|gb|AAM00528.1|AF458971_1 YPT53 [Saccharomyces cerevisiae]
gi|19880885|gb|AAM00534.1|AF458972_1 YPT53 [Saccharomyces cerevisiae]
gi|19880906|gb|AAM00552.1|AF458975_1 YPT53 [Saccharomyces cerevisiae]
gi|19880913|gb|AAM00558.1|AF458976_1 YPT53 [Saccharomyces cerevisiae]
gi|19880920|gb|AAM00564.1|AF458977_1 YPT53 [Saccharomyces cerevisiae]
gi|19880927|gb|AAM00570.1|AF458978_1 YPT53 [Saccharomyces cerevisiae]
gi|19880934|gb|AAM00576.1|AF458979_1 YPT53 [Saccharomyces cerevisiae]
gi|19880941|gb|AAM00582.1|AF458980_1 YPT53 [Saccharomyces cerevisiae]
gi|19880948|gb|AAM00588.1|AF458981_1 YPT53 [Saccharomyces cerevisiae]
gi|483436|emb|CAA53771.1| ypt53p [Saccharomyces cerevisiae]
gi|758295|emb|CAA59824.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1301998|emb|CAA95969.1| YPT53 [Saccharomyces cerevisiae]
gi|45270730|gb|AAS56746.1| YNL093W [Saccharomyces cerevisiae]
gi|71064107|gb|AAZ22515.1| Ypt53p [Saccharomyces cerevisiae]
gi|151944442|gb|EDN62720.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190409081|gb|EDV12346.1| GTP-binding protein YPT53 [Saccharomyces cerevisiae RM11-1a]
gi|207341718|gb|EDZ69697.1| YNL093Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259149269|emb|CAY82511.1| Ypt53p [Saccharomyces cerevisiae EC1118]
gi|285814559|tpg|DAA10453.1| TPA: Ypt53p [Saccharomyces cerevisiae S288c]
gi|323335804|gb|EGA77083.1| Ypt53p [Saccharomyces cerevisiae Vin13]
gi|365763318|gb|EHN04847.1| Ypt53p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296898|gb|EIW07999.1| Ypt53p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 220
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 93/163 (57%), Gaps = 26/163 (15%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
AAF+T+ + D I+FEIWDTAGQER+ LAPMYYRNAQAA++V+D+TN+ +F +A++W
Sbjct: 47 AAFLTKRITRDGKVIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNW 106
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADL-----PTSRRCVEYSE 190
V+EL + G +IVIAL GNK DL R ++
Sbjct: 107 VEELH-------EKVGH--------------DIVIALVGNKMDLLNNDDENENRAMKAPA 145
Query: 191 GEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ 233
+ E LL+ E SAKT N+ +IF + +K+P E N Q
Sbjct: 146 VQNLCERENLLYFEASAKTGENIYQIFQTLGEKVPCPEQNTRQ 188
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
K+VLLGESAVGKSS+VLRFV F E +E TIG
Sbjct: 14 KVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGA 47
>gi|21361884|ref|NP_116235.2| ras-related protein Rab-2B isoform 1 [Homo sapiens]
gi|296214433|ref|XP_002753820.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Callithrix
jacchus]
gi|332223471|ref|XP_003260896.1| PREDICTED: ras-related protein Rab-2B isoform 2 [Nomascus
leucogenys]
gi|332841820|ref|XP_003314293.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Pan troglodytes]
gi|397466079|ref|XP_003804800.1| PREDICTED: ras-related protein Rab-2B [Pan paniscus]
gi|426376304|ref|XP_004054944.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Gorilla gorilla
gorilla]
gi|28436385|sp|Q8WUD1.1|RAB2B_HUMAN RecName: Full=Ras-related protein Rab-2B
gi|18088786|gb|AAH20839.1| RAB2B, member RAS oncogene family [Homo sapiens]
gi|119586786|gb|EAW66382.1| RAB2B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119586787|gb|EAW66383.1| RAB2B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123993135|gb|ABM84169.1| RAB2B, member RAS oncogene family [synthetic construct]
gi|124000125|gb|ABM87571.1| RAB2B, member RAS oncogene family [synthetic construct]
gi|189067491|dbj|BAG37750.1| unnamed protein product [Homo sapiens]
gi|410220922|gb|JAA07680.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220924|gb|JAA07681.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220926|gb|JAA07682.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220928|gb|JAA07683.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220930|gb|JAA07684.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410268158|gb|JAA22045.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410328337|gb|JAA33115.1| RAB2B, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 22/150 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 94 ------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 141 HGLIFMETSAKTACNVEEAFINTAKEIYRK 170
>gi|410987203|ref|XP_003999895.1| PREDICTED: ras-related protein Rab-2A [Felis catus]
Length = 285
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 116 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 165
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF +W+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 166 -----------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGEAFARE 213
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++
Sbjct: 214 HGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKI 260
>gi|410930247|ref|XP_003978510.1| PREDICTED: ras-related protein Rab-2A-like [Takifugu rubripes]
Length = 212
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 92
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF +W+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 93 -----------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++
Sbjct: 141 HGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKI 187
>gi|395861634|ref|XP_003803086.1| PREDICTED: ras-related protein Rab-2B [Otolemur garnettii]
Length = 216
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 35/186 (18%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 94 ------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL-----VETAEAPK 246
+GL+FMETSAKTA NV E F+ AK++ +K +V+N G ++ + T+ P
Sbjct: 141 HGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSISTSLGPS 200
Query: 247 TS--NC 250
S NC
Sbjct: 201 VSQRNC 206
>gi|149723329|ref|XP_001497263.1| PREDICTED: ras-related protein Rab-37-like isoform 2 [Equus
caballus]
Length = 216
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 26/160 (16%)
Query: 69 FYPYLFSA----AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDIT 124
F P FSA F + V +D V ++ +IWDTAGQER+ ++ YYR+AQA +++YDIT
Sbjct: 47 FIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDIT 106
Query: 125 NQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRR 184
N+ +F NI ++W+ E+ A ++VI L GNKAD+ +S R
Sbjct: 107 NKSSF---------------DNI------RAWLTEIHEYAQRDVVIMLLGNKADV-SSER 144
Query: 185 CVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
+ +GE A E G+ FMETSAKT MNV F+ IAK+L
Sbjct: 145 VIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKEL 184
>gi|440911480|gb|ELR61146.1| Ras-related protein Rab-2A, partial [Bos grunniens mutus]
Length = 199
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 30 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 79
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF +W+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 80 -----------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGEAFARE 127
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++
Sbjct: 128 HGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKI 174
>gi|348531422|ref|XP_003453208.1| PREDICTED: ras-related protein Rab-2A-like [Oreochromis niloticus]
Length = 212
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 92
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF +W+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 93 -----------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++
Sbjct: 141 HGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKI 187
>gi|327260890|ref|XP_003215266.1| PREDICTED: ras-related protein Rab-17-like [Anolis carolinensis]
Length = 324
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 83/144 (57%), Gaps = 21/144 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
+F TQT+ LD+ TI+ EIWDTAGQE+YH++ +YYR A AAI+VYDIT +++ +AK W+
Sbjct: 60 SFFTQTLRLDNSTIKLEIWDTAGQEKYHSVCHLYYRGANAAILVYDITKKESLEKAKVWL 119
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
+EL++ I+I L GNK DL R V E E +A
Sbjct: 120 RELEK--------------------EFLQDEIIIVLVGNKVDLSPERE-VTLQEAEDFAN 158
Query: 197 ENGLLFMETSAKTAMNVNEIFVEI 220
+L+METSAKT V E+F +
Sbjct: 159 TKSMLYMETSAKTNHQVTELFTAL 182
>gi|291403498|ref|XP_002718096.1| PREDICTED: RAB2B protein [Oryctolagus cuniculus]
Length = 215
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 22/150 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 94 ------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 141 HGLIFMETSAKTACNVEEAFINTAKEIYRK 170
>gi|301784893|ref|XP_002927861.1| PREDICTED: ras-related protein Rab-2B-like [Ailuropoda melanoleuca]
gi|410961828|ref|XP_003987480.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Felis catus]
gi|281340558|gb|EFB16142.1| hypothetical protein PANDA_017701 [Ailuropoda melanoleuca]
Length = 216
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 22/150 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++T
Sbjct: 43 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRET--------- 93
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
F SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 94 ------------FNHLTSWLEDARQHSSSNMVIMLIGNKSDLE-SRRDVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 141 HGLIFMETSAKTACNVEEAFINTAKEIYRK 170
>gi|226509821|ref|NP_001141291.1| uncharacterized protein LOC100273382 [Zea mays]
gi|194703818|gb|ACF85993.1| unknown [Zea mays]
gi|195624662|gb|ACG34161.1| ras-related protein ARA-3 [Zea mays]
gi|414588872|tpg|DAA39443.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 214
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 47/201 (23%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +TV LD ++ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 40 FTTSFITTIGIDFKIRTVELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F ++W++ +++ A N++ L GNKAD+ S+R
Sbjct: 100 ESSFNNIRNWIRNIEQHASDNVNKI---------------------LVGNKADMDESKRA 138
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK-------------EVNNG 232
V S G+A A+E G+ F ETSAKT +NV ++F IA+ + ++ +N
Sbjct: 139 VPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAESDSKPEDRTISINRP 198
Query: 233 QGGRRLVETAEAPKTSNCCNT 253
+GG A A + S CC +
Sbjct: 199 EGGE-----ASASQKSACCGS 214
>gi|194214888|ref|XP_001496741.2| PREDICTED: ras-related protein Rab-2A-like [Equus caballus]
Length = 223
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 54 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 103
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF +W+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 104 -----------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGEAFARE 151
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++
Sbjct: 152 HGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKI 198
>gi|168049674|ref|XP_001777287.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671389|gb|EDQ57942.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 99/186 (53%), Gaps = 39/186 (20%)
Query: 74 FSAAFIT--------QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITN 125
F+ +FIT +T+ LD+ I+ +IWDTAGQER+ T+ YYR A ++VYD+T+
Sbjct: 38 FTTSFITTIGIDFKIRTIELDNKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 97
Query: 126 QDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC 185
+ +F ++W++ +++ A N++ L GNKAD+ S+R
Sbjct: 98 ESSFNNIRNWIRNIEQHASDNVNKI---------------------LVGNKADMDPSKRA 136
Query: 186 VEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAP 245
V +++G+A A+E G+ F ETSAKT MNV ++F IA+ + RL E+ P
Sbjct: 137 VPFAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKT----------RLAESDSKP 186
Query: 246 KTSNCC 251
N
Sbjct: 187 DAKNAA 192
>gi|1588651|prf||2209256A rab2 gene
Length = 220
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 28/167 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + + +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +D
Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD---------- 92
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF +W+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 93 -----------TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGGRRL 238
+GL+FMETSAKTA NV E F+ AK++ +K ++NN G ++
Sbjct: 141 HGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKI 187
>gi|334314630|ref|XP_001379530.2| PREDICTED: ras-related protein Rab-2B-like [Monodelphis domestica]
Length = 272
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 95/164 (57%), Gaps = 28/164 (17%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT +
Sbjct: 43 FGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR----------- 91
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
+TF SW+++ ++ + N+VI L GNK+DL SRR V+ EGEA+A E
Sbjct: 92 ----------ETFNHLTSWLEDARQHSSSNMVIMLIGNKSDL-ESRRDVKREEGEAFARE 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK------EVNNGQGG 235
+GL+FMETSAKTA NV E F+ AK++ +K +VNN G
Sbjct: 141 HGLIFMETSAKTASNVEEAFINTAKEIYRKIQQGLFDVNNEANG 184
>gi|383858269|ref|XP_003704624.1| PREDICTED: ras-related protein Rab-21-like [Megachile rotundata]
Length = 222
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 22/151 (14%)
Query: 74 FSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAK 133
A+F+ + + +D + IWDTAGQE++H L P+YYR + AI+VYDIT++DTF + K
Sbjct: 46 LQASFLNKKLTVDGKKVNLAIWDTAGQEKFHALGPIYYRMSNGAILVYDITDEDTFQKVK 105
Query: 134 SWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEA 193
+W VKEL++M I +A+AGNK DL + R V E E
Sbjct: 106 NW---------------------VKELKKMLGSEICLAIAGNKIDLEKN-RSVSIQEAEE 143
Query: 194 YAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
YA++ G + TSAK + N+ E+FV++ +++
Sbjct: 144 YAKQVGAMHYHTSAKLSQNIEEMFVDLTQRM 174
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 330
+K+VLLGE VGK+S+ LR+V G+F++ ST+
Sbjct: 14 FKVVLLGEGCVGKTSVALRYVEGKFNDKHISTL 46
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.133 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,672,216,663
Number of Sequences: 23463169
Number of extensions: 219953612
Number of successful extensions: 614038
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15009
Number of HSP's successfully gapped in prelim test: 4707
Number of HSP's that attempted gapping in prelim test: 561528
Number of HSP's gapped (non-prelim): 36158
length of query: 373
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 229
effective length of database: 8,980,499,031
effective search space: 2056534278099
effective search space used: 2056534278099
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)