RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy18160
(373 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 104 bits (260), Expect = 2e-27
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
+ F +T+ LD I+ +IWDTAGQER+ T+ YYR A ++VYDITN+ +F
Sbjct: 35 FISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSF 94
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
++W++ ++ A +++ + GNK +R V
Sbjct: 95 DNIRNWIRNIEEHASADVE---------------------KMILGNK-CDVNDKRQVSKE 132
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
GE A + G+ FMETSAK +NV F +A+ + K
Sbjct: 133 RGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 171
Score = 50.1 bits (119), Expect = 4e-08
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS 336
+KL+L+G+S VGK+ ++ RF F+ STIG + +
Sbjct: 7 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKI 45
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 101 bits (253), Expect = 1e-26
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 22/157 (14%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
+ F + + +D V ++ ++WDTAGQER+ ++ YYR+A A +++YD+TN+ +F
Sbjct: 36 FISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASF 95
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
++W+ E+ A ++ R V+
Sbjct: 96 DNIQAWLTEIHEYAQHDVALMLLGNKVDSA----------------------HERVVKRE 133
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
+GE A+E GL FMETSAKT +NV+ F IAK+L +
Sbjct: 134 DGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKR 170
Score = 49.1 bits (116), Expect = 1e-07
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSI 340
+K++L+G+S VGK+ L++RF G F + G + +
Sbjct: 6 AFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVL 49
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 99.5 bits (247), Expect = 1e-25
Identities = 56/150 (37%), Positives = 79/150 (52%), Gaps = 23/150 (15%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F +TV ++ ++ +IWDTAGQER+ T+ YYR A I+VYDIT++
Sbjct: 39 FKIKTVDINGKKVKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITDE----------- 87
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
TF K W K + A + L GNK+D+ R V +GEA A+E
Sbjct: 88 ----------RTFTNIKQWFKTVNEHANDEAQLLLVGNKSDME--TRVVTADQGEALAKE 135
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
G+ F+E+SAK NVNEIF +AK + +K
Sbjct: 136 LGIPFIESSAKNDDNVNEIFFTLAKLIQEK 165
Score = 48.6 bits (115), Expect = 1e-07
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSH 338
K++L+G+S VGKS L++RFV +F+ +TIG + +
Sbjct: 3 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKT 43
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 93.7 bits (232), Expect = 2e-23
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 22/155 (14%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
F+ +TV ++ ++ +IWDTAGQER+ ++ YYR+A A I+ YDIT +
Sbjct: 34 QGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCE--- 90
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
++F W++E+++ A ++ L GNK DL R +
Sbjct: 91 ------------------ESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQ- 131
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
E ++E + ++ETSAK + NV ++F+++A +L
Sbjct: 132 RAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 166
Score = 48.7 bits (115), Expect = 1e-07
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS 336
+K+VL+G + VGK+ LV RF +G F Q +TIG +
Sbjct: 6 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMI 44
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 92.6 bits (229), Expect = 4e-23
Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 22/155 (14%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
P+ F T+ + + I+ +IWDTAGQER+ + YYR A A++VYDIT +
Sbjct: 33 CPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRR--- 89
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
T+ SW+ + + + PN VI L GNKAD ++R V Y
Sbjct: 90 ------------------STYNHLSSWLTDARNLTNPNTVIILIGNKAD-LEAQRDVTYE 130
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
E + +AEENGLLF+E SAKT NV + F+E AKK+
Sbjct: 131 EAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 165
Score = 48.0 bits (113), Expect = 2e-07
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSH 338
+K +++G+ VGKS L+ +F +F TIG E +
Sbjct: 5 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRI 45
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 91.1 bits (225), Expect = 2e-22
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 22/158 (13%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
+ F +T+ +D I+ +IWDTAGQERY T+ YYR A I++YDITN+++F
Sbjct: 34 FVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF 93
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
+ W +++ + N + L GNK D+ R
Sbjct: 94 NAVQDWSTQIKTYSWDNAQ---------------------VLLVGNKCDMEDERVVSSER 132
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+ A+ G F E SAK +NV + F + + +K
Sbjct: 133 GRQ-LADHLGFEFFEASAKDNINVKQTFERLVDVICEK 169
Score = 46.4 bits (109), Expect = 8e-07
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSH 338
+K++++G S+VGK+S + R+ F ST+G + +
Sbjct: 5 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKT 46
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 89.9 bits (222), Expect = 5e-22
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
F +T+ +D + IWDTAGQER+ TL P YYR AQ I+VYD+T +DTF
Sbjct: 36 LAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTF 95
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
+ +W+ EL+ N + R V+ +
Sbjct: 96 VKLDNWLNELETYCTRNDIVN----------------------MLVGNKIDKENREVDRN 133
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
EG +A ++ +LF+E SAKT V F E+ +K+ +
Sbjct: 134 EGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 170
Score = 46.4 bits (109), Expect = 9e-07
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQ 335
K++++GES VGKSSL+LRF F +TIG + +
Sbjct: 8 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFK 45
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 89.5 bits (221), Expect = 9e-22
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 27/177 (15%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
F +TV LD T++ +IWDTAGQER+ T+ YYR + IIVYD+T+Q
Sbjct: 43 FKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQ----------- 91
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEE 197
++F K W++E+ R A ++ L GNK +R VEY + +A+
Sbjct: 92 ----------ESFNGVKMWLQEIDRYATSTVLKLLVGNK-CDLKDKRVVEYDVAKEFADA 140
Query: 198 NGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEAPKTSNCCNTQ 254
N + F+ETSA + NV + F+ +A+++ + + L ET + + N +
Sbjct: 141 NKMPFLETSALDSTNVEDAFLTMARQIKESMSQ-----QNLNETTQKKEDKGNVNLK 192
Score = 51.0 bits (121), Expect = 3e-08
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQS 336
+KL+L+G S VGKS L+LRF + STIG + +
Sbjct: 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKI 45
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 87.2 bits (215), Expect = 5e-21
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 80 TQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKEL 139
+ ++WDTAGQER+ +L ++R+A ++++D+T+Q +F ++W
Sbjct: 54 PNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNW---- 109
Query: 140 QRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENG 199
+ N I L GNKADLP R E + A++ G
Sbjct: 110 ----------------MSQLQANAYCENPDIVLIGNKADLPDQREVNER-QARELADKYG 152
Query: 200 LLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+ + ETSA T NV + + + K+
Sbjct: 153 IPYFETSAATGQNVEKAVETLLDLIMKR 180
Score = 49.9 bits (118), Expect = 6e-08
Identities = 12/61 (19%), Positives = 27/61 (44%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPIT 357
KL+ LG+S VGK++ + R+ +F+ +T+G + + + + +
Sbjct: 6 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 65
Query: 358 F 358
Sbjct: 66 L 66
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 86.5 bits (213), Expect = 8e-21
Identities = 57/158 (36%), Positives = 78/158 (49%), Gaps = 22/158 (13%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
F T+++ +D TI+ +IWDTAGQERY + YYR A A++VYDI
Sbjct: 33 SKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKH--- 89
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
T+ + W+KEL+ A NIVI L GNK+D R V
Sbjct: 90 ------------------LTYENVERWLKELRDHADSNIVIMLVGNKSD-LRHLRAVPTD 130
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
E A+AE+N L F+ETSA + NV E F I ++ +
Sbjct: 131 EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 168
Score = 47.6 bits (112), Expect = 3e-07
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQ 335
+K+VL+G+S VGKS+L+ RF R +F+ +STIG E
Sbjct: 5 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFA 42
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 85.7 bits (211), Expect = 2e-20
Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 23/164 (14%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
+ F ++ + + ++ +IWDTAGQER+ ++ YYR A A++VYDIT+++T+
Sbjct: 34 SNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETY 93
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
+W+ + + +A NI I L GNK + R V +
Sbjct: 94 NALTNWLTDARMLASQNIV---------------------IILCGNK-KDLDADREVTFL 131
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQ 233
E +A+EN L+F+ETSA T NV E FV+ A+K+ K + +G+
Sbjct: 132 EASRFAQENELMFLETSALTGENVEEAFVQCARKILNK-IESGE 174
Score = 45.3 bits (106), Expect = 2e-06
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSH 338
+K +++G + GKS L+ +F+ +F + TIG E S
Sbjct: 6 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKI 46
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 83.1 bits (204), Expect = 1e-19
Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 22/156 (14%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
Y F+++T+ L+D TIR ++WDTAGQER+ +L P Y R++ AA++VYDITN ++F
Sbjct: 29 YQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSF 88
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
+ W+ +++ ++ I L GNK DL R+
Sbjct: 89 QQTTKWIDDVRTERGSDVI---------------------IMLVGNKTDLADKRQV-SIE 126
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLP 225
EGE A+E ++F+ETSAK NV ++F +A LP
Sbjct: 127 EGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 162
Score = 51.1 bits (121), Expect = 2e-08
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNN 352
+KLV LGE +VGK+SL+ RF+ F ++TIG + S + +L +
Sbjct: 1 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 55
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 81.1 bits (199), Expect = 6e-19
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 22/158 (13%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
+ F + V +D I+ +IWDTAGQE + ++ YYR A A++VYDIT ++TF
Sbjct: 32 HDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETF 91
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
SW+++ ++ + N+ VI L GNK+D SRR V+
Sbjct: 92 NHLTSWLEDARQHSSSNM---------------------VIMLIGNKSD-LESRRDVKRE 129
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
EGEA+A E+GL+FMETSAKTA NV E F+ AK++ +K
Sbjct: 130 EGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 167
Score = 49.5 bits (117), Expect = 9e-08
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSH 338
+K +++G++ VGKS L+L+F +F + TIG E +
Sbjct: 4 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM 44
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 81.1 bits (199), Expect = 6e-19
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 21/149 (14%)
Query: 76 AAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSW 135
F + + +D EI DTAG E++ ++ +Y +N Q I+VY + NQ +F K
Sbjct: 37 EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPM 96
Query: 136 VKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYA 195
++ R+ + + L GNK DL + R V SEG A A
Sbjct: 97 RDQIIRV--------------------KRYEKVPVILVGNKVDLES-EREVSSSEGRALA 135
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKL 224
EE G FMETSAK+ V+E+F EI +++
Sbjct: 136 EEWGCPFMETSAKSKTMVDELFAEIVRQM 164
Score = 52.2 bits (124), Expect = 8e-09
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSM 344
+YK+V+LG VGKS+L ++FV G F E + TI + + S
Sbjct: 3 EYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSP 50
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 78.9 bits (193), Expect = 4e-18
Identities = 95/157 (60%), Positives = 115/157 (73%), Gaps = 22/157 (14%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
AAF+TQTVCLDD T++FEIWDTAGQERYH+LAPMYYR AQAAI+VYDITN+++F
Sbjct: 35 QESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESF 94
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
RAK+WVKELQR A PNI VIAL+GNK ++R V++
Sbjct: 95 ARAKNWVKELQRQASPNI---------------------VIALSGNK-ADLANKRAVDFQ 132
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
E ++YA++N LLFMETSAKT+MNVNEIF+ IAKKLPK
Sbjct: 133 EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
Score = 58.5 bits (140), Expect = 6e-11
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSH 338
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG +
Sbjct: 3 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQT 47
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 75.8 bits (185), Expect = 5e-17
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 20/156 (12%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
+ F+ + + +D + +IWDTAGQER+ +L +YR + ++ + + + +F
Sbjct: 35 LFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSF 94
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
+W KE A P + + GNK D+ R V
Sbjct: 95 QNLSNWKKEFIYYADVK-----------------EPESFPFVILGNKIDIS--ERQVSTE 135
Query: 190 EGEAYAEENG-LLFMETSAKTAMNVNEIFVEIAKKL 224
E +A+ +NG + ETSAK A NV F E +++
Sbjct: 136 EAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRV 171
Score = 50.3 bits (119), Expect = 4e-08
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 294 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNN 353
K +K++LLG+ VGKSSL+ R+V +F TIG E + ++ +
Sbjct: 3 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 62
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 74.6 bits (182), Expect = 1e-16
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 22/155 (14%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
+ A+F+T+ + + + IWDTAGQER+H L P+YYR++ AI+VYDIT++D+F
Sbjct: 32 HITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSF 91
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
+ K+WVKEL++M I E +R
Sbjct: 92 QKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEA-------------------- 131
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
E+YAE G TSAK + E+F+++ K++
Sbjct: 132 --ESYAESVGAKHYHTSAKQNKGIEELFLDLCKRM 164
Score = 47.2 bits (111), Expect = 5e-07
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLN 351
+K+VLLGE VGK+SLVLR+ +F++ +T+G + +
Sbjct: 3 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIW 57
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 73.2 bits (178), Expect = 4e-16
Identities = 69/158 (43%), Positives = 90/158 (56%), Gaps = 19/158 (12%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
AAF+TQ V +++ T++FEIWDTAGQER+ +LAPMYYRNAQAA++VYD+T +F
Sbjct: 32 KEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSF 91
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
+A+ WVKEL A +I + R V
Sbjct: 92 IKARHWVKELHEQASKDIIIALVGNKIDMLQEG-------------------GERKVARE 132
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
EGE AEE GLLF ETSAKT NVN++F+ I +K+P K
Sbjct: 133 EGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLK 170
Score = 47.0 bits (110), Expect = 5e-07
Identities = 24/51 (47%), Positives = 29/51 (56%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMP 345
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG +
Sbjct: 1 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHT 51
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 73.0 bits (178), Expect = 4e-16
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
+ V LD ++ +I DTAGQE Y + Y+R+ + + V+ IT ++F +
Sbjct: 39 DSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFR 98
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
+++ R+ N+ L GNK+DL R+ E + A+
Sbjct: 99 EQILRVK--------------------EDENVPFLLVGNKSDLEDKRQVSVE-EAKNRAD 137
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+ + ++ETSAKT NV+++F ++ +++ +
Sbjct: 138 QWNVNYVETSAKTRANVDKVFFDLMREIRAR 168
Score = 49.2 bits (116), Expect = 9e-08
Identities = 16/75 (21%), Positives = 31/75 (41%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPIT 357
+K++++G VGKS+L L+F+ +F E E T + + + L+
Sbjct: 5 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQED 64
Query: 358 FVWVIMMIFGCGNVP 372
+ + F G
Sbjct: 65 YAAIRDNYFRSGEGF 79
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 69.3 bits (168), Expect = 8e-15
Identities = 59/135 (43%), Positives = 85/135 (62%), Gaps = 22/135 (16%)
Query: 91 RFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTF 150
+F IWDTAG ER+ LAPMYYR + AAIIVYDIT ++TF K+WV+EL++ PP+I
Sbjct: 54 KFLIWDTAGLERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIV-- 111
Query: 151 GRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTA 210
+A+AGNK DL R + + + YA+ +F+ETSAK A
Sbjct: 112 -------------------VAIAGNKCDLTDVREVM-ERDAKDYADSIHAIFVETSAKNA 151
Query: 211 MNVNEIFVEIAKKLP 225
+N+NE+F+EI++++P
Sbjct: 152 ININELFIEISRRIP 166
Score = 47.3 bits (111), Expect = 4e-07
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNN 352
+ K+ LLG++ VGKSS++ RFV F TIG + + K + +
Sbjct: 4 ELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWD 59
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 69.2 bits (168), Expect = 1e-14
Identities = 32/196 (16%), Positives = 63/196 (32%), Gaps = 28/196 (14%)
Query: 33 GNWFSMMSGKRQSDCMAQIWLKDRVD--CMTQIVINVVFYPYLFSAAFITQTVCLDDVTI 90
G S + G ++ + + D + + + + F +TV + +
Sbjct: 1 GKVLSKIFGNKEMRIL--MLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKN--V 56
Query: 91 RFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTF 150
+F +WD GQ++ L YY Q I V D ++D A+
Sbjct: 57 KFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQE--------------- 101
Query: 151 GRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSE--GEAYAEENGLLFMETSAK 208
+ + + +I + NK DLP + + E E G + + A
Sbjct: 102 -----LHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCAT 156
Query: 209 TAMNVNEIFVEIAKKL 224
+ + E +
Sbjct: 157 SGDGLYEGLTWLTSNY 172
Score = 41.9 bits (97), Expect = 3e-05
Identities = 7/33 (21%), Positives = 18/33 (54%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQEST 329
+ ++++LG A GK++++ + GQ +
Sbjct: 12 EMRILMLGLDAAGKTTILYKLKLGQSVTTIPTV 44
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 66.9 bits (162), Expect = 7e-14
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 20/150 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
+ V +D EI DTAG E++ + +Y +N Q +VY IT Q TF +
Sbjct: 38 DSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDL- 96
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
+ L+ ++ + L GNK DL R + +
Sbjct: 97 -------------------REQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQ 137
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
F+E+SAK+ +NVNEIF ++ +++ +
Sbjct: 138 WCNCAFLESSAKSKINVNEIFYDLVRQINR 167
Score = 52.7 bits (125), Expect = 6e-09
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPI 356
+YKLV+LG VGKS+L ++FV+G F E + TI + + L+
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTE 62
Query: 357 TFVWVIMMIFGCGNVP 372
F + + G
Sbjct: 63 QFTAMRDLYMKNGQGF 78
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 65.4 bits (158), Expect = 3e-13
Identities = 24/142 (16%), Positives = 46/142 (32%), Gaps = 22/142 (15%)
Query: 90 IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDT 149
++ +WD GQ YY + A I V D T++D A
Sbjct: 61 LKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKE-------------- 106
Query: 150 FGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSE--GEAYAEENGLLFMETSA 207
LQ + + + NK D P + E S+ ++ + +SA
Sbjct: 107 ------LHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNLVELKDRSWSIVASSA 160
Query: 208 KTAMNVNEIFVEIAKKLPKKEV 229
+ E + + ++++
Sbjct: 161 IKGEGITEGLDWLIDVIKEEQL 182
Score = 39.6 bits (91), Expect = 2e-04
Identities = 6/30 (20%), Positives = 17/30 (56%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQ 326
+ ++++LG GK++++ R G+ +
Sbjct: 17 ELRILILGLDGAGKTTILYRLQIGEVVTTK 46
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 64.6 bits (156), Expect = 3e-13
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 22/135 (16%)
Query: 92 FEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFG 151
+I DTAGQE Y + Y R + + V+ I N +F + ++++R+
Sbjct: 53 LDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVK-------- 104
Query: 152 RAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAM 211
++ + L GNK D + R VE + + A G+ ++ETSAKT
Sbjct: 105 ------------DSDDVPMVLVGNKCD--LAARTVESRQAQDLARSYGIPYIETSAKTRQ 150
Query: 212 NVNEIFVEIAKKLPK 226
V + F + +++ +
Sbjct: 151 GVEDAFYTLVREIRQ 165
Score = 51.5 bits (122), Expect = 1e-08
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSH 338
+YKLV++G VGKS+L ++ ++ F + + TI +
Sbjct: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQV 44
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 64.7 bits (156), Expect = 4e-13
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 25/156 (16%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTL-APMYYRNAQAAIIVYDITNQDT 128
F + V +D I+ ++WDTAGQER+ YYRN A + VYD+TN +
Sbjct: 31 TEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMAS 90
Query: 129 FGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY 188
F +W++E ++ N +I L GNK DL + V
Sbjct: 91 FHSLPAWIEECKQHLLAN--------------------DIPRILVGNKCDLRS-AIQVPT 129
Query: 189 SEGEAYAEENGLLFMETSAKTAM---NVNEIFVEIA 221
+ +A+ + + ETSAK +V IF+ +A
Sbjct: 130 DLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLA 165
Score = 49.3 bits (116), Expect = 7e-08
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSH 338
+K++++G+S VGK+ L RF G+F + E+TIG + +
Sbjct: 3 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERA 43
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 65.0 bits (157), Expect = 5e-13
Identities = 32/187 (17%), Positives = 51/187 (27%), Gaps = 48/187 (25%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
TV + ++DTAGQE Y L P+ Y ++ + + + +F K
Sbjct: 38 DNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKW 97
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVE--------- 187
P L G + DL +E
Sbjct: 98 VPEITHHCPKT---------------------PFLLVGTQIDLRDDPSTIEKLAKNKQKP 136
Query: 188 --YSEGEAYAEE-NGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVNNGQGGRRLVETAEA 244
E A + + ++E SA T + +F E +
Sbjct: 137 ITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP---------------PE 181
Query: 245 PKTSNCC 251
PK S C
Sbjct: 182 PKKSRRC 188
Score = 51.9 bits (123), Expect = 1e-08
Identities = 12/73 (16%), Positives = 28/73 (38%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPIT 357
K V++G+ AVGK+ L++ + +F T+ + I T +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63
Query: 358 FVWVIMMIFGCGN 370
+ + + + +
Sbjct: 64 YDRLRPLSYPQTD 76
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 64.3 bits (155), Expect = 6e-13
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
T+ +DD R +I DTAGQE + + Y R + ++V+ +T++ +F +
Sbjct: 40 DSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQ 99
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
+++ R+ + L GNKADL R+ + EG+ A
Sbjct: 100 RQILRV--------------------KDRDEFPMILIGNKADLDHQRQVTQE-EGQQLAR 138
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
+ + +ME SAK MNV++ F E+ + + K +
Sbjct: 139 QLKVTYMEASAKIRMNVDQAFHELVRVIRKFQ 170
Score = 50.8 bits (120), Expect = 3e-08
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNN 353
+Y+LV++G VGKS+L ++F++ F + TI I + L+
Sbjct: 5 KYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTA 61
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 64.6 bits (156), Expect = 6e-13
Identities = 37/160 (23%), Positives = 61/160 (38%), Gaps = 33/160 (20%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
+ V +D + +WDTAGQE Y L P+ Y ++I + + + +F ++
Sbjct: 40 DNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKW 99
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVE--------- 187
R PN I L G K DL + +E
Sbjct: 100 YPEVRHHCPNT---------------------PIILVGTKLDLRDDKDTIEKLKEKKLTP 138
Query: 188 --YSEGEAYAEENG-LLFMETSAKTAMNVNEIFVEIAKKL 224
Y +G A A+E G + ++E SA T + +F E + +
Sbjct: 139 ITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAV 178
Score = 46.9 bits (110), Expect = 7e-07
Identities = 10/74 (13%), Positives = 27/74 (36%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPI 356
K V++G+ AVGK+ L++ + F T+ ++ + +
Sbjct: 5 AIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQE 64
Query: 357 TFVWVIMMIFGCGN 370
+ + + + +
Sbjct: 65 DYDRLRPLSYPQTD 78
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 64.2 bits (155), Expect = 7e-13
Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 33/159 (20%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
+V + ++DTAGQE Y L P+ Y +I + + N +F K
Sbjct: 44 DHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEW 103
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRC----------- 185
+ PN+ L G + DL +
Sbjct: 104 VPELKEYAPNV---------------------PFLLIGTQIDLRDDPKTLARLNDMKEKP 142
Query: 186 VEYSEGEAYAEENG-LLFMETSAKTAMNVNEIFVEIAKK 223
+ +G+ A+E G ++E SA T + +F E
Sbjct: 143 ICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181
Score = 48.4 bits (114), Expect = 2e-07
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 330
K V++G+ AVGK+ L++ + F E T+
Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV 42
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 63.1 bits (152), Expect = 1e-12
Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 22/149 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
++ I F +WD GQ++ L Y++N Q I V D +++ A+
Sbjct: 32 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREE-- 89
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPT--SRRCVEYSEGEAYA 195
++ L + V+ + NK DLP + + G
Sbjct: 90 ------------------LMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 131
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKL 224
T A + + E ++ +L
Sbjct: 132 RHRNWYIQATCATSGDGLYEGLDWLSNQL 160
Score = 40.8 bits (94), Expect = 6e-05
Identities = 5/31 (16%), Positives = 17/31 (54%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQEST 329
+++++G A GK++++ + G+ +
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEIVTTIPTI 32
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 62.8 bits (151), Expect = 2e-12
Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 84 CLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMA 143
D ++WDTAGQER+ +L +YR A ++VYD+TN +F KSW E A
Sbjct: 46 VDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHA 105
Query: 144 PPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENG-LLF 202
N +P + GNK D S++ V + A+ G +
Sbjct: 106 NVN-----------------SPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPL 148
Query: 203 METSAKTAMNVNEIFVEIAKKLPKK 227
TSAK A+NV+ F EIA+ ++
Sbjct: 149 FLTSAKNAINVDTAFEEIARSALQQ 173
Score = 46.2 bits (108), Expect = 1e-06
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPT 346
K+++LG+S VGK+SL+ R+V ++ + ++TIG + +
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKV 51
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 62.0 bits (149), Expect = 4e-12
Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
T+ +D + R +I DTAGQE + + Y R ++V+ I ++ +F
Sbjct: 41 DSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLF 100
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
++ R+ + + L GNKADL + R+ +
Sbjct: 101 TQILRVK--------------------DRDDFPVVLVGNKADLESQRQVPRSEASA-FGA 139
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
+ + + E SAK +NV+E F ++ + + K +
Sbjct: 140 SHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQ 171
Score = 47.7 bits (112), Expect = 3e-07
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQ 326
+KLV++G VGKS+L ++F++ F
Sbjct: 6 THKLVVVGGGGVGKSALTIQFIQSYFVSDY 35
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 59.2 bits (142), Expect = 4e-11
Identities = 22/149 (14%), Positives = 43/149 (28%), Gaps = 22/149 (14%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
+ + RF +WD GQE + YY N + I+V D T+++ +
Sbjct: 47 IGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREE-- 104
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR--RCVEYSEGEAYA 195
K L + + NK D+ +
Sbjct: 105 ------------------LYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSI 146
Query: 196 EENGLLFMETSAKTAMNVNEIFVEIAKKL 224
+++ A T + + + +L
Sbjct: 147 KDHQWHIQACCALTGEGLCQGLEWMMSRL 175
Score = 40.8 bits (94), Expect = 7e-05
Identities = 5/31 (16%), Positives = 17/31 (54%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQE 327
++K++++G GK++++ +F +
Sbjct: 15 EHKVIIVGLDNAGKTTILYQFSMNEVVHTSP 45
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 58.5 bits (140), Expect = 5e-11
Identities = 32/145 (22%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 84 CLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMA 143
+D+ ++ DTAGQE + + Y R +IVY +T++ +F + + + R+
Sbjct: 46 EIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRV- 104
Query: 144 PPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFM 203
+ + L NK DL R V +G+ A + + ++
Sbjct: 105 -------------------KDRESFPMILVANKVDLMH-LRKVTRDQGKEMATKYNIPYI 144
Query: 204 ETSAKTA-MNVNEIFVEIAKKLPKK 227
ETSAK +NV++ F ++ + + ++
Sbjct: 145 ETSAKDPPLNVDKTFHDLVRVIRQQ 169
Score = 48.5 bits (114), Expect = 1e-07
Identities = 18/74 (24%), Positives = 30/74 (40%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPIT 357
YKLV++G+ VGKS+L ++F + F + TI I + L+
Sbjct: 5 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEE 64
Query: 358 FVWVIMMIFGCGNV 371
F + G+
Sbjct: 65 FSAMREQYMRTGDG 78
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 58.6 bits (140), Expect = 5e-11
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
Y F+ + + ++D +R +WDTAGQE + + YYR AQA ++V+ T++++F
Sbjct: 31 YKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESF 90
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
A S +E +I AL NK D C++
Sbjct: 91 ----------------------EAISSWREKVVAEVGDIPTALVQNKID-LLDDSCIKNE 127
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
E E A+ L F TS K +NV+E+F +A+K
Sbjct: 128 EAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKH 162
Score = 43.5 bits (101), Expect = 7e-06
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSH 338
K+V++G AVGKSS++ R+ +G F + + TIG +
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQ 43
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 58.9 bits (141), Expect = 6e-11
Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 34/164 (20%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
T + +D I +WDT+G Y + P+ Y ++ A +I +DI+ +T
Sbjct: 37 ENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKW 96
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR-----------RC 185
K + PN + L G K+DL T
Sbjct: 97 KGEIQEFCPNTK---------------------MLLVGCKSDLRTDVSTLVELSNHRQTP 135
Query: 186 VEYSEGEAYAEENG-LLFMETSAKTAMN-VNEIFVEIAKKLPKK 227
V Y +G A++ G ++E SA + N V +IF K
Sbjct: 136 VSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 179
Score = 48.5 bits (114), Expect = 2e-07
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 330
+ K+V++G+S GK++L+ F + F E T+
Sbjct: 2 KCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTV 35
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 57.7 bits (138), Expect = 1e-10
Identities = 29/149 (19%), Positives = 48/149 (32%), Gaps = 11/149 (7%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
+ +D + +WDTAG E Y L P+ Y + ++ + I + D+
Sbjct: 37 ENYVADIEVDGKQVELALWDTAGLEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKW 96
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
+ PN+ + + V+ EG A
Sbjct: 97 TPEVKHFCPNVPIILVGNKKDLRNDEHT----------RRELAKMKQEPVKPEEGRDMAN 146
Query: 197 ENGLL-FMETSAKTAMNVNEIFVEIAKKL 224
G +ME SAKT V E+F +
Sbjct: 147 RIGAFGYMECSAKTKDGVREVFEMATRAA 175
Score = 53.1 bits (126), Expect = 4e-09
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPT 346
+ KLV++G+ A GK+ L++ + QF E T+ + +
Sbjct: 2 RKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVE 51
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 57.0 bits (136), Expect = 2e-10
Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 87 DVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPN 146
D + +IWDTAGQER+ +L +YR A ++V+D+T +TF SW E A P
Sbjct: 48 DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASP- 106
Query: 147 IDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETS 206
P N + GNK DL R+ +N + + ETS
Sbjct: 107 ----------------RDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETS 149
Query: 207 AKTAMNVNEIFVEIAKKLPKKE 228
AK A+NV + F IA+ K+E
Sbjct: 150 AKEAINVEQAFQTIARNALKQE 171
Score = 52.0 bits (123), Expect = 1e-08
Identities = 16/72 (22%), Positives = 35/72 (48%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPIT 357
K+++LG+S VGK+SL+ ++V +F ++TIG + + + ++ +
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 62
Query: 358 FVWVIMMIFGCG 369
+ + F G
Sbjct: 63 RFQSLGVAFYRG 74
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 56.5 bits (135), Expect = 3e-10
Identities = 23/138 (16%), Positives = 40/138 (28%), Gaps = 22/138 (15%)
Query: 89 TIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNID 148
+ +WD GQ + Y+ N I V D ++ F
Sbjct: 59 GFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQE------------- 105
Query: 149 TFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSE--GEAYAEENGLLFMETS 206
+ L+ + + + NK DL T+ E +E + S
Sbjct: 106 -------LTELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCS 158
Query: 207 AKTAMNVNEIFVEIAKKL 224
A T V + + K +
Sbjct: 159 ALTGEGVQDGMNWVCKNV 176
Score = 38.8 bits (89), Expect = 4e-04
Identities = 6/33 (18%), Positives = 15/33 (45%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQEST 329
+ +++LLG GK++L+ + +
Sbjct: 16 EVRILLLGLDNAGKTTLLKQLASEDISHITPTQ 48
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 56.1 bits (134), Expect = 4e-10
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 20/142 (14%)
Query: 89 TIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNID 148
+I DT G ++ + + A I+VY IT++ + K +++ +
Sbjct: 49 ICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDV-- 106
Query: 149 TFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAK 208
+I I L GNK D + R V+ SE EA A FMETSAK
Sbjct: 107 -----------------ESIPIMLVGNKCD-ESPSREVQSSEAEALARTWKCAFMETSAK 148
Query: 209 TAMNVNEIFVEIAKKLPKKEVN 230
NV E+F E+ ++ V+
Sbjct: 149 LNHNVKELFQELLNLEKRRTVS 170
Score = 53.1 bits (126), Expect = 5e-09
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPIT 357
Y++ + G VGKSSLVLRFV+G F E T+ + S S+ T +
Sbjct: 3 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQ 62
Query: 358 FVWVIMMIFGCGNV 371
F + + G+
Sbjct: 63 FPAMQRLSISKGHA 76
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 54.6 bits (130), Expect = 1e-09
Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 3/144 (2%)
Query: 88 VTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKEL-QRMAPPN 146
+T +++ + E+Y + + I F V + +
Sbjct: 26 LTGSYQVLEKTESEQYKKEMLVDGQTHLVLIREEAGAPDAKFSGWADAVIFVFSLEDENS 85
Query: 147 IDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTS--RRCVEYSEGEAYAEENGLLFME 204
R + L+ + +AL G + + S R + A+ + E
Sbjct: 86 FQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGDARARALCADMKRCSYYE 145
Query: 205 TSAKTAMNVNEIFVEIAKKLPKKE 228
T A +NV+ +F E+A+K+
Sbjct: 146 TCATYGLNVDRVFQEVAQKVVTLR 169
Score = 49.6 bits (117), Expect = 8e-08
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 295 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQEST 329
I + +L +LG++ GKSSL+ RF+ G + +++
Sbjct: 3 IPELRLGVLGDARSGKSSLIHRFLTGSYQVLEKTE 37
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 53.1 bits (126), Expect = 4e-09
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 25/159 (15%)
Query: 70 YPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTF 129
Y + I+F +WDTAGQE++ L YY AQ AII++D+T++ T+
Sbjct: 32 YVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTY 91
Query: 130 GRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYS 189
+W ++ NI I L GNK D+ + +
Sbjct: 92 KNVPNWHRD----------------------LVRVCENIPIVLCGNKVDIKDRKVKAKS- 128
Query: 190 EGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKKE 228
+ + L + + SAK+ N + F+ +A+KL
Sbjct: 129 --IVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDP 165
Score = 51.2 bits (121), Expect = 2e-08
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPI 356
Q+KLVL+G+ GK++ V R + G+F + +T+G E + P K + +
Sbjct: 3 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 62
Query: 357 TFVWVIMMIFGC 368
+ +
Sbjct: 63 EKFGGLRDGYYI 74
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 52.4 bits (124), Expect = 6e-09
Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 21/150 (14%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
T+ + ++ ++ DTAGQ+ Y Y + I+VY +T+ +F K
Sbjct: 39 NTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVI- 97
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
K L + I I L GNK DL R + Y EG+A AE
Sbjct: 98 -------------------HGKLLDMVGKVQIPIMLVGNKKDLHM-ERVISYEEGKALAE 137
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
F+E+SAK ++F I + K
Sbjct: 138 SWNAAFLESSAKENQTAVDVFRRIILEAEK 167
Score = 45.5 bits (106), Expect = 2e-06
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQ 335
K+ +LG +VGKSSL ++FV GQF + + TI
Sbjct: 4 SRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFT 42
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 51.3 bits (121), Expect = 2e-08
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 156 WVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNE 215
++ + +I I L GNK+DL R EG A A F+ETSA NV E
Sbjct: 100 RIQLRRARQTEDIPIILVGNKSDLVRCREVSVS-EGRACAVVFDCKFIETSAAVQHNVKE 158
Query: 216 IFVEIAKKLPKKE 228
+F I +++ +
Sbjct: 159 LFEGIVRQVRLRR 171
Score = 45.9 bits (107), Expect = 1e-06
Identities = 13/74 (17%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQF-HEYQESTIGGECQSSHSISFSMPTKNRLNNNVPI 356
Y++VL+GE VGKS+L F + +G + + L +
Sbjct: 4 YRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWEN 63
Query: 357 TFVWVIMMIFGCGN 370
+
Sbjct: 64 KGENEWLHDHCMQV 77
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 50.8 bits (120), Expect = 2e-08
Identities = 44/145 (30%), Positives = 63/145 (43%), Gaps = 23/145 (15%)
Query: 84 CLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMA 143
+DD + EI DTAGQE + R + ++VYDIT++ +F L +
Sbjct: 44 TIDDEVVSMEILDTAGQEDTIQ-REGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEI- 101
Query: 144 PPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFM 203
P N+ + L GNKADL R V EGE A E F
Sbjct: 102 -------------------KKPKNVTLILVGNKADL-DHSRQVSTEEGEKLATELACAFY 141
Query: 204 ETSAKTA-MNVNEIFVEIAKKLPKK 227
E SA T N+ EIF E+ +++ ++
Sbjct: 142 ECSACTGEGNITEIFYELCREVRRR 166
Score = 50.8 bits (120), Expect = 3e-08
Identities = 15/76 (19%), Positives = 31/76 (40%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPI 356
+ KL + G + VGKS+LV+RF+ +F + T+ + +I + + L+
Sbjct: 2 EVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQE 61
Query: 357 TFVWVIMMIFGCGNVP 372
+ +
Sbjct: 62 DTIQREGHMRWGEGFV 77
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 50.5 bits (119), Expect = 3e-08
Identities = 17/75 (22%), Positives = 28/75 (37%)
Query: 154 KSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNV 213
+L+R + V + R V EG A A F+ETSA NV
Sbjct: 91 SELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEGRACAVVFDCKFIETSAALHHNV 150
Query: 214 NEIFVEIAKKLPKKE 228
+F + +++ +
Sbjct: 151 QALFEGVVRQIRLRR 165
Score = 47.8 bits (112), Expect = 2e-07
Identities = 12/71 (16%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Query: 298 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPIT 357
YK++LLG VGKS+L F + + G + + +
Sbjct: 2 YKVLLLGAPGVGKSALARIFGGVEDGPE--AEAAGHTYDRSIVVDGEEASLMVYDIWEQD 59
Query: 358 FVWVIMMIFGC 368
+
Sbjct: 60 GGRWLPGHCMA 70
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 50.1 bits (118), Expect = 5e-08
Identities = 22/155 (14%), Positives = 42/155 (27%), Gaps = 22/155 (14%)
Query: 75 SAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
S L+ + IWD GQ+ + Y+ + I V D ++ +
Sbjct: 31 SPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQR 90
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSE--GE 192
++ L + + NK DLP + C E
Sbjct: 91 ELQSLLVE--------------------ERLAGATLLIFANKQDLPGALSCNAIQEALEL 130
Query: 193 AYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+ SA T ++ + + +
Sbjct: 131 DSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 165
Score = 41.6 bits (96), Expect = 4e-05
Identities = 6/30 (20%), Positives = 15/30 (50%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQ 326
+ +L++LG GK++++ +F
Sbjct: 2 ELRLLMLGLDNAGKTTILKKFNGEDVDTIS 31
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 47.8 bits (112), Expect = 3e-07
Identities = 18/148 (12%), Positives = 45/148 (30%), Gaps = 11/148 (7%)
Query: 75 SAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKS 134
+ + L I+F +D G + L Y+ + + D + + F A+
Sbjct: 29 QPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARV 88
Query: 135 WVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAY 194
+ L +A + A ++A+L ++ + + +
Sbjct: 89 ELDALFNIAELK--------DVPFVILGNKIDAPN---AVSEAELRSALGLLNTTGSQRI 137
Query: 195 AEENGLLFMETSAKTAMNVNEIFVEIAK 222
+ + S E F +++
Sbjct: 138 EGQRPVEVFMCSVVMRNGYLEAFQWLSQ 165
Score = 40.8 bits (94), Expect = 6e-05
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQ 326
KL+ LG GK++L+ + Q
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLATLQ 29
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 47.0 bits (110), Expect = 5e-07
Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 22/142 (15%)
Query: 89 TIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNID 148
++F++WD G YY N A I V D ++D G +KS
Sbjct: 48 NLKFQVWDLGGLTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSE------------- 94
Query: 149 TFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVE--YSEGEAYAEENGLLFMETS 206
V L+ ++ + NK D+ + E S G ++ +TS
Sbjct: 95 -------LVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTS 147
Query: 207 AKTAMNVNEIFVEIAKKLPKKE 228
A ++E + + L ++
Sbjct: 148 ATKGTGLDEAMEWLVETLKSRQ 169
Score = 42.4 bits (98), Expect = 2e-05
Identities = 6/31 (19%), Positives = 16/31 (51%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQE 327
+ ++++LG GK++++ R G+
Sbjct: 5 EMRILILGLDGAGKTTILYRLQVGEVVTTIP 35
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 46.6 bits (109), Expect = 7e-07
Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 156 WVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSE--GEAYAEENGLLFMETSAKTAMNV 213
L + I + + GNK DLP + E E + ++ + S K N+
Sbjct: 93 LHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNI 152
Query: 214 NEIFVEIAK 222
+ + +
Sbjct: 153 DITLQWLIQ 161
Score = 44.3 bits (103), Expect = 4e-06
Identities = 12/72 (16%), Positives = 25/72 (34%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPI 356
+ +L L+G GK++ V GQF+E T+G + + ++ +
Sbjct: 2 EMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFR 61
Query: 357 TFVWVIMMIFGC 368
+
Sbjct: 62 SMWERYCRGVSA 73
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 45.7 bits (107), Expect = 2e-06
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
+ KL+LLG GKS+ + + T G
Sbjct: 2 ELKLLLLGTGESGKSTFIKQMRIIHGS--GVPTTG 34
Score = 43.8 bits (102), Expect = 1e-05
Identities = 14/161 (8%), Positives = 40/161 (24%), Gaps = 15/161 (9%)
Query: 82 TVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRA--------- 132
D ++ F + D GQ + N + + + ++ D
Sbjct: 37 EYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEE 96
Query: 133 --KSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEY-- 188
+ + N +++ ++V ++ E+
Sbjct: 97 SKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFIL 156
Query: 189 --SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPKK 227
+ + T A N+ +F + + +
Sbjct: 157 KMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQL 197
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 43.6 bits (102), Expect = 1e-05
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++L+LLG GKS++V + T G
Sbjct: 6 THRLLLLGAGESGKSTIVKQMRILHV----VLTSG 36
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 42.6 bits (99), Expect = 2e-05
Identities = 15/70 (21%), Positives = 24/70 (34%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPI 356
+ KL+LLG GKS++V + + H F + +
Sbjct: 2 EVKLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTFKDLHFKMFDVGGQRSERKKWIH 61
Query: 357 TFVWVIMMIF 366
F V +IF
Sbjct: 62 CFEGVTAIIF 71
Score = 41.1 bits (95), Expect = 8e-05
Identities = 21/173 (12%), Positives = 38/173 (21%), Gaps = 37/173 (21%)
Query: 81 QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQ 140
+ F+++D GQ + A I +++ D + +
Sbjct: 33 VETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMH 92
Query: 141 RMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGL 200
K + + I L NK + + Y E G
Sbjct: 93 ESM----------KLFDSICNNKWFTDTSIILFLNK-KDLFEEKIKKSPLTICYPEYAGS 141
Query: 201 LFM--------------------------ETSAKTAMNVNEIFVEIAKKLPKK 227
T A NV +F + + K
Sbjct: 142 NTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKN 194
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 41.6 bits (96), Expect = 4e-05
Identities = 14/135 (10%), Positives = 32/135 (23%), Gaps = 6/135 (4%)
Query: 90 IRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDT 149
+ F +D G + + Y + + D + + +K + L +
Sbjct: 57 MTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIA-NV 115
Query: 150 FGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKT 209
+ + + G + S L S
Sbjct: 116 PILILGNKIDRPEAISEERLREMFGLYGQTT-----GKGSVSLKELNARPLEVFMCSVLK 170
Query: 210 AMNVNEIFVEIAKKL 224
E F +A+ +
Sbjct: 171 RQGYGEGFRWMAQYI 185
Score = 41.2 bits (95), Expect = 6e-05
Identities = 8/39 (20%), Positives = 16/39 (41%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQ 335
KLV LG GK++L+ + ++ + +
Sbjct: 13 TGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEE 51
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 41.0 bits (95), Expect = 7e-05
Identities = 18/149 (12%), Positives = 40/149 (26%), Gaps = 13/149 (8%)
Query: 81 QTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKELQ 140
+ + F++ D GQ + + + + + + D L
Sbjct: 35 HEYDFEIKNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLT 94
Query: 141 RMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAEENGL 200
+ + N+ I L NK DL + S + + E G
Sbjct: 95 ES----------LNIFETIVNNRVFSNVSIILFLNKTDLLE-EKVQVVSIKDYFLEFEGD 143
Query: 201 LFMETSAKTAMNVNEIFVEIAKKLPKKEV 229
+ + E F + ++ +
Sbjct: 144 PHCLRDVQK--FLVECFRGKRRDQQQRPL 170
Score = 40.7 bits (94), Expect = 9e-05
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
K++LLG GKS+ + + + Q+ T G
Sbjct: 2 LVKILLLGAGESGKSTFLKQM---RIIHGQDPTKG 33
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 40.0 bits (92), Expect = 2e-04
Identities = 8/33 (24%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 331
++ +G GK+ L +R + GQ+ + +++I
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLTGQYRDT-QTSIT 33
Score = 29.6 bits (65), Expect = 0.52
Identities = 12/106 (11%), Positives = 26/106 (24%), Gaps = 17/106 (16%)
Query: 78 FITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVK 137
V + I + L + +A+A + V D + +
Sbjct: 36 SAIYKVNNNRGNSLTLIDLPGHESLRFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFL 95
Query: 138 ELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSR 183
V + + +A NK D+ ++
Sbjct: 96 Y-----------------QVLIDSMALKNSPSLLIACNKQDIAMAK 124
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 31.7 bits (70), Expect = 0.086
Identities = 19/154 (12%), Positives = 43/154 (27%), Gaps = 3/154 (1%)
Query: 77 AFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWV 136
+ + + + ++ DI +Q + +
Sbjct: 19 KLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNPQDIISQKMKEVTLNMI 78
Query: 137 KELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLPTSRRCVEYSEGEAYAE 196
+E + G K + + L NKA+ E +
Sbjct: 79 READLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAENLREFEREVKPELYSLGF 138
Query: 197 ENGLLFMETSAKTAMNVNEIFVEIAKKLPKKEVN 230
+ SA+ +N++ + I KKL +K ++
Sbjct: 139 GE---PIPVSAEHNINLDTMLETIIKKLEEKGLD 169
Score = 27.8 bits (60), Expect = 1.7
Identities = 10/68 (14%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Query: 301 VLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPITFVW 360
+++G VGKS+L + V + E G +L + +
Sbjct: 4 LIVGRPNVGKSTLFNKLV-KKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNP 62
Query: 361 VIMMIFGC 368
++
Sbjct: 63 QDIISQKM 70
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 31.5 bits (70), Expect = 0.10
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHE 324
Q +++ G GK+SL+
Sbjct: 3 QPSIIIAGPQNSGKTSLLTLLTTDSVRP 30
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 29.7 bits (65), Expect = 0.30
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 299 KLVLLGESAVGKSSLVLRFVR 319
K+V+ G GKSSL+
Sbjct: 3 KVVIAGRPNAGKSSLLNALAG 23
Score = 29.3 bits (64), Expect = 0.46
Identities = 8/36 (22%), Positives = 16/36 (44%)
Query: 189 SEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKL 224
E +E NG + SA+T V+ + + + +
Sbjct: 126 GETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSM 161
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 29.7 bits (65), Expect = 0.34
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 175 NKADLPTSRRCVEYSEGEAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
NK D + + ++ N L + SA+T +NV+ I + K LP+
Sbjct: 121 NKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPE 172
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 28.9 bits (63), Expect = 0.67
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 167 NIVIALAGNKADLPTSRRCV--EYSEG-EAYAEENGLLFMETSAKTAMNVNEIFVEIAKK 223
+I +A NK D + + V +E E E +F+ SAK N+ + I +
Sbjct: 121 DIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLKNRIFEV 180
Query: 224 LPKK 227
+ ++
Sbjct: 181 IRER 184
Score = 25.4 bits (54), Expect = 8.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 301 VLLGESAVGKSSLVLRFVR 319
+ G S VGKS+L+ R
Sbjct: 4 IFAGRSNVGKSTLIYRLTG 22
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 29.3 bits (65), Expect = 0.76
Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 16/89 (17%)
Query: 301 VLLGESAVGKSSLV----LRFVRGQFHEYQE-----STIGGECQSSHSI-------SFSM 344
VL+GE VGK+++V R V+G E + S G + ++
Sbjct: 47 VLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAV 106
Query: 345 PTKNRLNNNVPITFVWVIMMIFGCGNVPG 373
+ + I F+ + + G G G
Sbjct: 107 IQEVVQSQGEVILFIDELHTVVGAGKAEG 135
>d1ixsa_ a.5.1.1 (A:) DNA helicase RuvA subunit, C-terminal domain
{Thermus thermophilus [TaxId: 274]}
Length = 50
Score = 26.1 bits (57), Expect = 0.97
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 97 TAGQERYHTLAPMYYRNAQAAIIVYDITNQDTFGRAKSWVKE 138
A +E LA + ++ AQA +V D+ Q+ RA+ +KE
Sbjct: 3 EAAEEAVMALAALGFKEAQARAVVLDLLAQNPKARAQDLIKE 44
>d1f86a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 27.5 bits (61), Expect = 1.3
Identities = 5/20 (25%), Positives = 8/20 (40%), Gaps = 1/20 (5%)
Query: 85 LDDVTIRFEIWDTAGQERYH 104
+ + F D +G RY
Sbjct: 79 HEHAEVVFTAND-SGPRRYT 97
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 27.9 bits (62), Expect = 1.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 300 LVLLGESAVGKSSLVLRFVR 319
+++ G+S VGKS L V+
Sbjct: 17 VLITGDSGVGKSETALELVQ 36
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 27.6 bits (61), Expect = 1.6
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 300 LVLLGESAVGKSSLVLRFVR 319
++L G S +GKS L +
Sbjct: 18 VLLTGRSGIGKSECALDLIN 37
>d1n0ea_ b.129.1.2 (A:) Hypothetical protein MraZ {Mycoplasma
pneumoniae [TaxId: 2104]}
Length = 141
Score = 27.3 bits (60), Expect = 1.7
Identities = 11/74 (14%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Query: 34 NWFSMMSGKRQSDCMAQIWLKDRVDCMTQIVIN----VVFYPYLFSAAFITQTVCLDDVT 89
+F + + + + + ++ V+ L + A + + + L
Sbjct: 54 KYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQF 113
Query: 90 IRFEIWDTAGQERY 103
EIWD E Y
Sbjct: 114 DHLEIWDKKLYEDY 127
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 27.2 bits (60), Expect = 2.2
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 300 LVLLGESAVGKSSLVLRFVR 319
+++ G+S +GKS L ++
Sbjct: 18 VLITGDSGIGKSETALELIK 37
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 27.8 bits (60), Expect = 2.2
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 300 LVLLGESAVGKSSLVLRFVRGQFHEY 325
++LG GKSS++ + Y
Sbjct: 32 TLVLGLRRTGKSSIIKIGINELNLPY 57
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 27.0 bits (58), Expect = 2.6
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 202 FMETSAKTAMNVNEIFVEIAKKLPKKEV 229
+ SAKT V+E+ I L E+
Sbjct: 151 IIPISAKTGFGVDELKNLIITTLNNAEI 178
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 27.0 bits (58), Expect = 3.1
Identities = 9/68 (13%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Query: 301 VLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPITFVW 360
++G+ VGKS+L+ + G + I + + +
Sbjct: 9 AIVGKPNVGKSTLLNNLL-GVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPM 67
Query: 361 VIMMIFGC 368
+ F
Sbjct: 68 DALGEFMD 75
Score = 26.2 bits (56), Expect = 4.6
Identities = 5/24 (20%), Positives = 9/24 (37%)
Query: 202 FMETSAKTAMNVNEIFVEIAKKLP 225
SA V E+ ++ +P
Sbjct: 147 PRMLSALDERQVAELKADLLALMP 170
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 26.9 bits (58), Expect = 3.3
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 299 KLVLLGESAVGKSSLVLRFVR 319
++V++G+ VGKS+L+ R +
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLN 22
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 26.3 bits (56), Expect = 4.6
Identities = 9/72 (12%), Positives = 16/72 (22%)
Query: 297 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGECQSSHSISFSMPTKNRLNNNVPI 356
++ G S GKSS + + T G + L
Sbjct: 16 GIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYA 75
Query: 357 TFVWVIMMIFGC 368
+ +
Sbjct: 76 EVPEEMKRKWQR 87
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 26.3 bits (57), Expect = 5.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 299 KLVLLGESAVGKSSLV 314
++++G+ VGKSS V
Sbjct: 34 TILVMGKGGVGKSSTV 49
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+
modules {Escherichia coli [TaxId: 562]}
Length = 268
Score = 26.5 bits (58), Expect = 5.5
Identities = 22/88 (25%), Positives = 31/88 (35%), Gaps = 15/88 (17%)
Query: 301 VLLGESAVGKSS----LVLRFVRGQFHEYQESTI-----------GGECQSSHSISFSMP 345
+L+GES VGK++ L R V+G E G + + F
Sbjct: 43 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 102
Query: 346 TKNRLNNNVPITFVWVIMMIFGCGNVPG 373
K + I F+ I I G G G
Sbjct: 103 LKQLEQDTNSILFIDEIHTIIGAGAASG 130
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 26.3 bits (56), Expect = 5.6
Identities = 12/108 (11%), Positives = 36/108 (33%), Gaps = 2/108 (1%)
Query: 121 YDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIALAGNKADLP 180
+ +EL+ + + V+ + + I + + KAD
Sbjct: 88 EREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKI 147
Query: 181 TSRRCVEYSEG--EAYAEENGLLFMETSAKTAMNVNEIFVEIAKKLPK 226
+ ++++ + + + S++T +E + I K + +
Sbjct: 148 PKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMINR 195
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 26.7 bits (58), Expect = 5.8
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 299 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 332
+ + GE+ GKSS + RG +E + + G
Sbjct: 58 NVAVTGETGSGKSSFINTL-RGIGNEEEGAAKTG 90
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 202
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/124 (8%), Positives = 28/124 (22%), Gaps = 8/124 (6%)
Query: 52 WLKDRVDCMTQIVINVVFYPYLFSAAFITQTVCLDDVTIRFEIWDTAGQERYHTLAPMYY 111
K +D + L V E+ ++ + A
Sbjct: 61 TFKSTLDREYITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYDYAVAEQ 120
Query: 112 RNAQAAIIVYDITNQDTFGRAKSWVKELQRMAPPNIDTFGRAKSWVKELQRMAPPNIVIA 171
++A ++R++ +I F + N+ ++
Sbjct: 121 CPVKSAEDQLYAITFRKGLGNPLLYDGVERVSLQDIKDFAD--------KVYTKENLEVS 172
Query: 172 LAGN 175
Sbjct: 173 GENV 176
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 26.1 bits (56), Expect = 6.9
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 9/77 (11%)
Query: 300 LVLLGESAVGKSSLVLRFVRGQFHEYQESTI--------GGECQSSHSISFSMPTKNRLN 351
+V+ G S GKS+L+ + + ++ + ++ GE S+ +
Sbjct: 4 IVISGPSGTGKSTLL-KKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMI 62
Query: 352 NNVPITFVWVIMMIFGC 368
N +
Sbjct: 63 KNNEFIEWAQFSGNYYG 79
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 25.8 bits (55), Expect = 7.8
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 299 KLVLLGESAVGKSSLVLRFVR 319
K+ ++G VGKS+L +
Sbjct: 10 KVAIVGRPNVGKSTLFNAILN 30
>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 122
Score = 25.3 bits (55), Expect = 8.1
Identities = 5/50 (10%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Query: 61 TQIVINVVFYPYLFSAAFITQTVCL-DDVTIRFEIWDTAGQERYHTLAPM 109
P F+ + + + + ++R + + + H + P+
Sbjct: 40 KLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEGNKFLGHRIIPI 89
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.133 0.402
Gapped
Lambda K H
0.267 0.0387 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,354,758
Number of extensions: 60401
Number of successful extensions: 376
Number of sequences better than 10.0: 1
Number of HSP's gapped: 341
Number of HSP's successfully gapped: 146
Length of query: 373
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 286
Effective length of database: 1,213,086
Effective search space: 346942596
Effective search space used: 346942596
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.5 bits)