BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18161
(209 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DC39|DESI2_DANRE Desumoylating isopeptidase 2 OS=Danio rerio GN=desi2 PE=2 SV=1
Length = 196
Score = 246 bits (627), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 140/199 (70%), Gaps = 37/199 (18%)
Query: 1 MAREPILLNVYDMLWTNDYTSTLGLGVFHSGIEVYGVEYAYGGHQYPFSGIFRISPRDAK 60
MA EP++LNVYDM W N++TS+LG+GVFHSGIE+YG E+AYGGH YPFSGIF I+P DA
Sbjct: 1 MANEPVILNVYDMYWINEFTSSLGIGVFHSGIEIYGREFAYGGHPYPFSGIFEITPGDAT 60
Query: 61 ELGEQFAFRESIQIGSTDFTESDVKRIVTELGKEYRGDRYHLMNKGESIQIGSTDFTESD 120
ELGE F F+E+I + GSTDFTE D
Sbjct: 61 ELGETFKFKEAIVL-------------------------------------GSTDFTEED 83
Query: 121 VKRIVTELGKEYRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRLAYFSSCVPFLQRC 180
V+RIV E+GKEY+G+ YHLM+KNCNHFS+ L++ILCG+EIP WVNRLAYFSSCVPFLQ C
Sbjct: 84 VERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIPRWVNRLAYFSSCVPFLQSC 143
Query: 181 LPKEWLTPDALTQSINYSM 199
LPKEWLTP AL S++ +
Sbjct: 144 LPKEWLTPAALQSSVSQEL 162
>sp|Q5PQ09|DESI2_XENLA Desumoylating isopeptidase 2 OS=Xenopus laevis GN=desi2 PE=2 SV=1
Length = 192
Score = 243 bits (619), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 142/202 (70%), Gaps = 37/202 (18%)
Query: 1 MAREPILLNVYDMLWTNDYTSTLGLGVFHSGIEVYGVEYAYGGHQYPFSGIFRISPRDAK 60
MA +PI+LNVYDM W N+YTS+LG+GVFHSGI+VYG E+AYGGH YPFSG+F ISP D+
Sbjct: 1 MANQPIILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDST 60
Query: 61 ELGEQFAFRESIQIGSTDFTESDVKRIVTELGKEYRGDRYHLMNKGESIQIGSTDFTESD 120
ELG+ F F+E+I + GSTDFTE+D
Sbjct: 61 ELGDTFKFKEAIAL-------------------------------------GSTDFTEND 83
Query: 121 VKRIVTELGKEYRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRLAYFSSCVPFLQRC 180
+++I+ ELGKEY+G+ YHLM+KNCNHFS+ L++ILCG+EIP WVNRLAYFS+CVPFLQ C
Sbjct: 84 IEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLAYFSTCVPFLQSC 143
Query: 181 LPKEWLTPDALTQSINYSMSSD 202
LPKEWLTP AL SI+ + +
Sbjct: 144 LPKEWLTPAALQSSISQELQDE 165
>sp|Q5ZIV7|DESI2_CHICK Desumoylating isopeptidase 2 OS=Gallus gallus GN=DESI2 PE=2 SV=1
Length = 193
Score = 237 bits (604), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 111/196 (56%), Positives = 137/196 (69%), Gaps = 37/196 (18%)
Query: 1 MAREPILLNVYDMLWTNDYTSTLGLGVFHSGIEVYGVEYAYGGHQYPFSGIFRISPRDAK 60
MA + ++LNVYDM W N+YTS+LG+GVFHSGIEVYG E+AYGGH YPFSGIF ISP +A
Sbjct: 1 MANQLVILNVYDMYWMNEYTSSLGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNAS 60
Query: 61 ELGEQFAFRESIQIGSTDFTESDVKRIVTELGKEYRGDRYHLMNKGESIQIGSTDFTESD 120
ELGE F F+E++ +G STDF E D
Sbjct: 61 ELGETFKFKEAVVLG-------------------------------------STDFMEDD 83
Query: 121 VKRIVTELGKEYRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRLAYFSSCVPFLQRC 180
+++IV ELGKE++G+ YHLM+KNCNHFS+ L++ILCG+EIP WVNRLAYFSSC+PFLQ C
Sbjct: 84 IEKIVEELGKEFKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLAYFSSCIPFLQSC 143
Query: 181 LPKEWLTPDALTQSIN 196
LPKEWLTP AL S++
Sbjct: 144 LPKEWLTPAALQSSVS 159
>sp|Q9D291|DESI2_MOUSE Desumoylating isopeptidase 2 OS=Mus musculus GN=Desi2 PE=2 SV=1
Length = 194
Score = 234 bits (597), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 138/201 (68%), Gaps = 37/201 (18%)
Query: 2 AREPILLNVYDMLWTNDYTSTLGLGVFHSGIEVYGVEYAYGGHQYPFSGIFRISPRDAKE 61
A + ++LNVYDM W N+YTS++G+GVFHSGIEVYG E+AYGGH YPFSGIF ISP +A E
Sbjct: 3 ANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASE 62
Query: 62 LGEQFAFRESIQIGSTDFTESDVKRIVTELGKEYRGDRYHLMNKGESIQIGSTDFTESDV 121
LGE F F+E++ +G STDF E D+
Sbjct: 63 LGETFKFKEAVVLG-------------------------------------STDFLEDDI 85
Query: 122 KRIVTELGKEYRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRLAYFSSCVPFLQRCL 181
++IV ELGKEY+G+ YHLM+KNCNHFS+ L++ILCG+EIP W+NRLAYFSSC+PFLQ CL
Sbjct: 86 EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCL 145
Query: 182 PKEWLTPDALTQSINYSMSSD 202
PKEWLTP AL S++ + +
Sbjct: 146 PKEWLTPAALQSSVSQELQDE 166
>sp|Q5XIT6|DESI2_RAT Desumoylating isopeptidase 2 OS=Rattus norvegicus GN=Desi2 PE=2
SV=1
Length = 194
Score = 234 bits (596), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 136/195 (69%), Gaps = 37/195 (18%)
Query: 2 AREPILLNVYDMLWTNDYTSTLGLGVFHSGIEVYGVEYAYGGHQYPFSGIFRISPRDAKE 61
A + ++LNVYDM W N+YTS++G+GVFHSGIEVYG E+AYGGH YPFSGIF ISP +A E
Sbjct: 3 ANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNAAE 62
Query: 62 LGEQFAFRESIQIGSTDFTESDVKRIVTELGKEYRGDRYHLMNKGESIQIGSTDFTESDV 121
LGE F F+E++ +G STDF E D+
Sbjct: 63 LGETFKFKEAVVLG-------------------------------------STDFLEDDI 85
Query: 122 KRIVTELGKEYRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRLAYFSSCVPFLQRCL 181
++IV ELGKEY+G+ YHLM+KNCNHFS+ L++ILCG+EIP W+NRLAYFSSC+PFLQ CL
Sbjct: 86 EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCL 145
Query: 182 PKEWLTPDALTQSIN 196
PKEWLTP AL S++
Sbjct: 146 PKEWLTPAALQSSVS 160
>sp|A3QRX8|DESI2_PIG Desumoylating isopeptidase 2 OS=Sus scrofa GN=DESI2 PE=2 SV=1
Length = 194
Score = 233 bits (595), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 136/195 (69%), Gaps = 37/195 (18%)
Query: 2 AREPILLNVYDMLWTNDYTSTLGLGVFHSGIEVYGVEYAYGGHQYPFSGIFRISPRDAKE 61
A + ++LNVYDM W N+YTS++G+GVFHSGIEVYG E+AYGGH YPFSGIF ISP +A E
Sbjct: 3 ANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASE 62
Query: 62 LGEQFAFRESIQIGSTDFTESDVKRIVTELGKEYRGDRYHLMNKGESIQIGSTDFTESDV 121
LGE F F+E++ +G STDF E D+
Sbjct: 63 LGETFKFKEAVVLG-------------------------------------STDFLEDDI 85
Query: 122 KRIVTELGKEYRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRLAYFSSCVPFLQRCL 181
++IV ELGKEY+G+ YHLM+KNCNHFS+ L++ILCG+EIP W+NRLAYFSSC+PFLQ CL
Sbjct: 86 EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCL 145
Query: 182 PKEWLTPDALTQSIN 196
PKEWLTP AL S++
Sbjct: 146 PKEWLTPAALQSSVS 160
>sp|Q5R456|DESI2_PONAB Desumoylating isopeptidase 2 OS=Pongo abelii GN=DESI2 PE=2 SV=1
Length = 194
Score = 233 bits (595), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 136/195 (69%), Gaps = 37/195 (18%)
Query: 2 AREPILLNVYDMLWTNDYTSTLGLGVFHSGIEVYGVEYAYGGHQYPFSGIFRISPRDAKE 61
A + ++LNVYDM W N+YTS++G+GVFHSGIEVYG E+AYGGH YPFSGIF ISP +A E
Sbjct: 3 ANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASE 62
Query: 62 LGEQFAFRESIQIGSTDFTESDVKRIVTELGKEYRGDRYHLMNKGESIQIGSTDFTESDV 121
LGE F F+E++ +G STDF E D+
Sbjct: 63 LGETFKFKEAVVLG-------------------------------------STDFLEDDI 85
Query: 122 KRIVTELGKEYRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRLAYFSSCVPFLQRCL 181
++IV ELGKEY+G+ YHLM+KNCNHFS+ L++ILCG+EIP W+NRLAYFSSC+PFLQ CL
Sbjct: 86 EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCL 145
Query: 182 PKEWLTPDALTQSIN 196
PKEWLTP AL S++
Sbjct: 146 PKEWLTPAALQSSVS 160
>sp|Q9BSY9|DESI2_HUMAN Desumoylating isopeptidase 2 OS=Homo sapiens GN=DESI2 PE=1 SV=1
Length = 194
Score = 233 bits (595), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 136/195 (69%), Gaps = 37/195 (18%)
Query: 2 AREPILLNVYDMLWTNDYTSTLGLGVFHSGIEVYGVEYAYGGHQYPFSGIFRISPRDAKE 61
A + ++LNVYDM W N+YTS++G+GVFHSGIEVYG E+AYGGH YPFSGIF ISP +A E
Sbjct: 3 ANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASE 62
Query: 62 LGEQFAFRESIQIGSTDFTESDVKRIVTELGKEYRGDRYHLMNKGESIQIGSTDFTESDV 121
LGE F F+E++ +G STDF E D+
Sbjct: 63 LGETFKFKEAVVLG-------------------------------------STDFLEDDI 85
Query: 122 KRIVTELGKEYRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRLAYFSSCVPFLQRCL 181
++IV ELGKEY+G+ YHLM+KNCNHFS+ L++ILCG+EIP W+NRLAYFSSC+PFLQ CL
Sbjct: 86 EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCL 145
Query: 182 PKEWLTPDALTQSIN 196
PKEWLTP AL S++
Sbjct: 146 PKEWLTPAALQSSVS 160
>sp|Q93VG8|PPDEX_ARATH DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486
PE=2 SV=1
Length = 224
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 46/210 (21%)
Query: 2 AREPILLNVYDMLWTNDYTSTLGLGVFHSGIEVYGVEYAYGGHQYPFSGIFRISPRDAKE 61
A P+ LNVYD+ N+Y G+G+FHSGIE + +EY YG H+YP SG++ + PR+
Sbjct: 24 ALTPVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYEVEPRNCP- 82
Query: 62 LGEQFAFRESIQIGSTDFTESDVKRIVTELGKEYRGDRYHLMNKGESIQIGSTDFTESDV 121
F FR S+ +G+T + SD + + +L ++Y GD YH
Sbjct: 83 ---GFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYH-------------------- 119
Query: 122 KRIVTELGKEYRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRLAYFSSCVPFLQRCL 181
L+ KNCNHF+ E+ L G+ IPGW+NRLA S F L
Sbjct: 120 -----------------LIAKNCNHFTEEVCLQLTGKPIPGWINRLARVGS---FCNCLL 159
Query: 182 PK--EWLTPDALTQSINYSMSSDTSNHSST 209
P+ + AL + + +S ++++ +S+
Sbjct: 160 PESIQLTAVSALPERLEFSDEDESNSEASS 189
>sp|Q8X1T0|HAG1_SCHPO DeSI-like protein hag1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hag1 PE=1 SV=1
Length = 201
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 44/180 (24%)
Query: 6 ILLNVYDMLW---TNDYTSTLGLGVFHSGIEVYGVEYAYGGHQYPFS-GIFRISPRDAKE 61
+ +NVYD++ N TLGLG++H+G+ + G EYA+G H+ P S G+F PR
Sbjct: 3 VYINVYDLMPDSPVNKLAWTLGLGIYHTGLVLEGKEYAFGAHEIPGSTGVFATMPRPPL- 61
Query: 62 LGEQFAFRESIQIGSTDFTESDVKRIVTELGKEYRGDRYHLMNKGESIQIGSTDFTESDV 121
E +R SI + + + DV RI+ L +E+
Sbjct: 62 --EGCRWRCSIALPNCTLPKPDVDRILIRLSQEF-------------------------- 93
Query: 122 KRIVTELGKEYRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRLAYFSSCVPFLQRCL 181
G Y L+ +NCNHF+N L G IP ++NR++ P + L
Sbjct: 94 -----------TGLSYSLLERNCNHFTNAAAIELTGSPIPSFLNRISRIGLAFPTITNAL 142
>sp|Q6ICB0|DESI1_HUMAN Desumoylating isopeptidase 1 OS=Homo sapiens GN=DESI1 PE=1 SV=1
Length = 168
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 109 IQIGSTDFTESDVKRIVTELGKE-YRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRL 167
+ +GST+ TE ++ LG+ +RG+ Y+L NCN FSNE+ + L G++IP ++ L
Sbjct: 72 VDVGSTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDL 131
Query: 168 AYFSSCVPFLQRCLP 182
PF Q P
Sbjct: 132 PSEVLSTPFGQALRP 146
>sp|Q4KM30|DESI1_RAT Desumoylating isopeptidase 1 OS=Rattus norvegicus GN=Desi1 PE=2
SV=1
Length = 168
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 109 IQIGSTDFTESDVKRIVTELGKE-YRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRL 167
+ +G+T+ TE ++ LG+ +RG+ Y+L NCN FSNE+ + L G++IP ++ L
Sbjct: 72 VDVGNTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDL 131
Query: 168 AYFSSCVPFLQRCLP 182
PF Q P
Sbjct: 132 PSEVLSTPFGQALRP 146
>sp|Q9CQT7|DESI1_MOUSE Desumoylating isopeptidase 1 OS=Mus musculus GN=Desi1 PE=1 SV=1
Length = 168
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 109 IQIGSTDFTESDVKRIVTELGKE-YRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRL 167
+ +G+T+ TE ++ LG+ +RG+ Y+L NCN FSNE+ + L G++IP ++ L
Sbjct: 72 VDVGNTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDL 131
Query: 168 AYFSSCVPFLQRCLP 182
PF Q P
Sbjct: 132 PSEVLSTPFGQALRP 146
>sp|Q6GLM5|DESI1_XENLA Desumoylating isopeptidase 1 OS=Xenopus laevis GN=desi1 PE=2 SV=1
Length = 169
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 109 IQIGSTDFTESDVKRIVTELGKE-YRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRL 167
+++G T+ TE ++ LG+ + G+ YHL + NCN FSNE+ + L G++IP ++ L
Sbjct: 73 MELGITEVTEEIFLEYLSSLGESGFSGESYHLFDHNCNTFSNEVAQFLTGKKIPSYITEL 132
Query: 168 AYFSSCVPFLQRCLP 182
P Q P
Sbjct: 133 PSEVLSTPLGQALRP 147
>sp|P07257|QCR2_YEAST Cytochrome b-c1 complex subunit 2, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=QCR2 PE=1
SV=1
Length = 368
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 33 EVYGVEYAYG-GHQYPFSGIFRISPRDAKELGEQFAFRESIQIGSTDFTESDVKRIVTE 90
++Y + + G G+ + G+ R+S +D K+ ++ +E++++ + E+D+KR V E
Sbjct: 145 QLYAITFRKGLGNPLLYDGVERVSLQDIKDFADKVYTKENLEVSGENVVEADLKRFVDE 203
>sp|A3LPW2|FYV10_PICST Protein FYV10 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=FYV10 PE=3 SV=2
Length = 511
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 11 YDMLWTNDYTSTLGLGVFHSGIEVYGVEYAYGGHQYPFSGIFRISPRDAKELGEQFAFRE 70
Y+ L +++ +L + + ++YG+ Y Y +G+ + + E FRE
Sbjct: 331 YEKLLSDERWDSLSMCFVENFTKLYGISKNYPIFIYLSAGLASLKTKSCYHNTENTIFRE 390
Query: 71 SIQIGSTDFTESDVKRIVTEL-GKEYRGDR--YHLMNKGESIQIGSTDF 116
+ +I TD ES K+ +T L K+YRG Y L+NK + + S +
Sbjct: 391 NQEINVTD--ESIYKKDLTVLTDKKYRGSNQYYKLLNKINNCPVCSPEL 437
>sp|Q6FSJ3|QCR2_CANGA Cytochrome b-c1 complex subunit 2, mitochondrial OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=QCR2 PE=3 SV=1
Length = 364
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 27 VFHSGIEVYGVEYAYG-GHQYPFSGIFRISPRDAKELGEQFAFRESIQIGSTDFTESDVK 85
+F + +Y + + G G+ + + ++S D KE + +E+I+I E+D+K
Sbjct: 137 IFQAEDLLYNISFRNGLGNPVLYDSVEKVSIDDLKEFSSKVYTKENIEIEGVGINEADLK 196
Query: 86 RIVTE 90
+ VTE
Sbjct: 197 KFVTE 201
>sp|Q2JD44|SEPF_FRASC Cell division protein SepF OS=Frankia sp. (strain CcI3) GN=sepF
PE=3 SV=2
Length = 180
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 54 ISPR---DAKELGEQFAFRESIQIGSTDFTESDVKRIV---TELGKEYRGDRYHLMNKGE 107
+ PR +A+++GE+F + + TD ++D KR+V L RGD + NK
Sbjct: 95 LQPRSYNEARQIGEEFRDGTPVIMNLTDMDDADAKRLVDFAAGLIFGLRGDLEKVTNKVF 154
Query: 108 SIQIGSTDFTESDVKRI 124
+ + + TE+D +RI
Sbjct: 155 LLSPHNVEVTETDKRRI 171
>sp|O94411|MFR2_SCHPO Meiotic fizzy-related protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mfr2 PE=1 SV=1
Length = 509
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 125 VTELGKEYRGDRYHLMNKNCNHFSNELTKIL-----CGQEIPGWVNRLAYFSSCVPFLQR 179
VT++ K + L N+ CN SNE KIL + IP N A+ F ++
Sbjct: 18 VTKIRKLTAAKKNELQNRKCNQASNEEKKILYKSNFLDRFIPSKANSDAFRIMENAFTEK 77
Query: 180 CLPKEWLTPDALTQSI 195
+E L PD L ++
Sbjct: 78 LNTQESLLPDILNLNV 93
>sp|P45866|FADF_BACSU Uncharacterized protein FadF OS=Bacillus subtilis (strain 168)
GN=fadF PE=2 SV=1
Length = 705
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 36 GVEYAYGGHQYPFSGIFRISPRDAKELGEQFAFRESIQIGSTDFTESDVKRIVT 89
GV +A G++ SG +PR LG +F F+E + ++F ++DVK+IVT
Sbjct: 486 GVSFAILGNKEKNSGD---TPR---RLGNEFLFQELAEKNISEFEKNDVKKIVT 533
>sp|A4SZM1|SYQ_POLSQ Glutamine--tRNA ligase OS=Polynucleobacter necessarius subsp.
asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=glnS PE=3 SV=1
Length = 590
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 45 QYPFSGIFRISPRDAKELGEQFAFRESIQIGSTDFTESDVKRIVTELGKEYRGD 98
Q P G FR+ P + G + R + TDF E+D K +T++ Y D
Sbjct: 427 QEPVKGFFRLYPPIGDQPGSRVRLRHGFVVECTDF-ETDAKGNITQVNVNYFPD 479
>sp|Q4QP41|SIAP_HAEI8 Sialic acid-binding periplasmic protein SiaP OS=Haemophilus
influenzae (strain 86-028NP) GN=siaP PE=3 SV=1
Length = 329
Score = 30.4 bits (67), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 64/175 (36%), Gaps = 18/175 (10%)
Query: 6 ILLNVYDMLWTNDYTSTLGLGVFHSGIEVYGVEYAYGGHQYPFSGIFRISPRDAKELGEQ 65
I L V + DY G+ S E E + G IS + +LG+
Sbjct: 13 ISLGVSSAVLAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDD 72
Query: 66 FAFRESIQIGSTDFTESDVKRI------VTELGKEYRGDRYHLMNKGESIQIGSTDFTES 119
A + ++ GS DFT ++ R Y Y++ K + T+F +
Sbjct: 73 RAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKA----LFDTEFGKD 128
Query: 120 DVKRI-----VTELGKEYRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRLAY 169
+K++ VT L + Y G R N+ N ++ L +P LAY
Sbjct: 129 LIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKL---RVPNAATNLAY 180
>sp|P44542|SIAP_HAEIN Sialic acid-binding periplasmic protein SiaP OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=siaP PE=1 SV=1
Length = 329
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 64/175 (36%), Gaps = 18/175 (10%)
Query: 6 ILLNVYDMLWTNDYTSTLGLGVFHSGIEVYGVEYAYGGHQYPFSGIFRISPRDAKELGEQ 65
I L V + DY G+ S E E + G IS + +LG+
Sbjct: 13 ISLGVSSAVLAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDD 72
Query: 66 FAFRESIQIGSTDFTESDVKRI------VTELGKEYRGDRYHLMNKGESIQIGSTDFTES 119
A + ++ GS DFT ++ R Y Y++ K + T+F +
Sbjct: 73 RAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKA----LFDTEFGKD 128
Query: 120 DVKRI-----VTELGKEYRGDRYHLMNKNCNHFSNELTKILCGQEIPGWVNRLAY 169
+K++ VT L + Y G R N+ N ++ L +P LAY
Sbjct: 129 LIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKL---RVPNAATNLAY 180
>sp|Q0RNN4|SEPF_FRAAA Cell division protein SepF OS=Frankia alni (strain ACN14a) GN=sepF
PE=3 SV=2
Length = 181
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 58 DAKELGEQFAFRESIQIGSTDFTESDVKRIV---TELGKEYRGDRYHLMNKGESIQIGST 114
+A+++GE+F + + TD + D KR+V L RGD + NK + +
Sbjct: 103 EARQIGEEFRDGTPVIMNLTDMDDVDAKRLVDFAAGLIFGLRGDIEKVTNKVFLLSPHNV 162
Query: 115 DFTESDVKRI 124
+ TE+D +RI
Sbjct: 163 EVTETDKRRI 172
>sp|Q87ZG4|Y3465_PSESM Probable DNA repair protein PSPTO_3465 OS=Pseudomonas syringae pv.
tomato (strain DC3000) GN=PSPTO_3465 PE=3 SV=1
Length = 299
Score = 30.4 bits (67), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 56 PRDAKELGEQFAFRESIQIGSTDFTESDV-KRIVTELGKEYRGDRYHLMNKGESIQIGST 114
P D +EL + E++ +E D+ +R+V ++ +++ D+YH + + +Q+ T
Sbjct: 167 PADVREL-DALELTEAVTDARLTKSERDMARRLVKDMSADWQPDQYHDTFQEKIMQLVQT 225
Query: 115 DFTESDVKRIVTELGKEYR 133
E ++ + T+ G+E R
Sbjct: 226 KAGEGKIEDVETDPGEEER 244
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,584,732
Number of Sequences: 539616
Number of extensions: 3434992
Number of successful extensions: 7842
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 7812
Number of HSP's gapped (non-prelim): 45
length of query: 209
length of database: 191,569,459
effective HSP length: 112
effective length of query: 97
effective length of database: 131,132,467
effective search space: 12719849299
effective search space used: 12719849299
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)