RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy18163
(1028 letters)
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 511 bits (1318), Expect = e-174
Identities = 122/332 (36%), Positives = 183/332 (55%), Gaps = 14/332 (4%)
Query: 353 PAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREI 412
C V +++ L +I +GT+G V++A+ ++T + VALK++ ME EKEGFPIT+LREI
Sbjct: 8 VECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 67
Query: 413 NTLLKAQHPNIVTVREIVV------GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPG 466
L +H N+V + EI I++V D+ EHD+ L+ + K F
Sbjct: 68 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLS 124
Query: 467 EVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKH---- 522
E+K +MQ LLN + ++H N ILHRD+K +N+L++ G+LK+ DFGLAR +
Sbjct: 125 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184
Query: 523 YTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKT 582
YT VVTLWYR PELLLG ++Y PID+W GCI AE P+ G ++ QL+ I +
Sbjct: 185 YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 244
Query: 583 MGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTR 642
G+ ++WP +K+ + +K ++ + DL+ K L DP R
Sbjct: 245 CGSITPEVWPNVDNYELYEKLELVKGQK-RKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 303
Query: 643 ITADEALRHDYFSESPLPIDPAMFPTWPAKSE 674
I +D+AL HD+F P+P D + S
Sbjct: 304 IDSDDALNHDFFWSDPMPSDLKGMLSTHLTSM 335
Score = 70.7 bits (174), Expect = 5e-13
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 744 PAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
C V +++ L +I +GT+G V++A+ ++T + VA
Sbjct: 8 VECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVA 46
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 505 bits (1302), Expect = e-172
Identities = 130/353 (36%), Positives = 192/353 (54%), Gaps = 19/353 (5%)
Query: 354 AIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKME---KEKEGFPITSLR 410
A+ + ++ L+ + EG + VY+A+DK T++IVA+K++K+ + K+G T+LR
Sbjct: 2 ALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 411 EINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKC 470
EI L + HPNI+ + + I +V D++E D++ +++ V P +K
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGH--KSNISLVFDFMETDLEVIIKDN---SLVLTPSHIKA 116
Query: 471 LMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTL 530
M L + +LH +WILHRDLK +NLLL G+LK+ DFGLA+ +GSP + YT VVT
Sbjct: 117 YMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTR 176
Query: 531 WYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKI 590
WYR+PELL G + Y +DMW+VGCI AE L P G SDL+QL+RIF+T+GTP E+
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQ 236
Query: 591 WPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALR 650
WP LP TF +P + L S + DL+ ++P RITA +AL+
Sbjct: 237 WPDMCSLPDYV--TFKSFPGI-PLHHIF--SAAGDDLLDLIQGLFLFNPCARITATQALK 291
Query: 651 HDYFSESPLPIDPAMFPTWPAKSELAHKKAAMA------SPKPPSGGHNYKQL 697
YFS P P P E +++ A + G K+L
Sbjct: 292 MKYFSNRPGPTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKL 344
Score = 66.4 bits (163), Expect = 1e-11
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 745 AIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
A+ + ++ L+ + EG + VY+A+DK T++IVA
Sbjct: 2 ALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVA 39
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 491 bits (1267), Expect = e-167
Identities = 121/319 (37%), Positives = 181/319 (56%), Gaps = 8/319 (2%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQ 419
S +FK L ++ GTY VY+ +K T VALK +K++ E EG P T++REI+ + + +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELK 61
Query: 420 HPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSK--KQVFIPGEVKCLMQQLLN 477
H NIV + +++ N K+ +V +++++D+K M++ + VK QLL
Sbjct: 62 HENIVRLYDVIHTEN--KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 478 AVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPEL 537
+A H+N ILHRDLK NLL++ RG LK+GDFGLAR +G P+ ++ VVTLWYR+P++
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDV 179
Query: 538 LLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKL 597
L+G + YST ID+WS GCI AE + +PLF G +D EQL IF MGTPNE +WP +KL
Sbjct: 180 LMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL 239
Query: 598 PAVQKMTFAEYP--NVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFS 655
P + P ++ + L D L L +P R++A +AL H +F+
Sbjct: 240 PKY-NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298
Query: 656 ESPLPIDPAMFPTWPAKSE 674
E +
Sbjct: 299 EYYHHASMGGSRSHHHHHH 317
Score = 63.8 bits (156), Expect = 7e-11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 751 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
S +FK L ++ GTY VY+ +K T VA
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVA 34
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 491 bits (1267), Expect = e-167
Identities = 121/328 (36%), Positives = 189/328 (57%), Gaps = 19/328 (5%)
Query: 357 GCRSVEEFKCLNRIEEGTYGVVYRAKD-KRTDEIVALKRLKMEKEKEGFPITSLREINTL 415
CR+ ++++C+ I EG YG V++A+D K VALKR++++ +EG P++++RE+ L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 416 L---KAQHPNIVTVREIVVGSNMD---KIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVK 469
+HPN+V + ++ S D K+ +V ++V+ D+ + ++ + +K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIK 123
Query: 470 CLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVT 529
+M QLL + LH + ++HRDLK N+L++ G +K+ DFGLAR Y + T +VVT
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVT 182
Query: 530 LWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEK 589
LWYR+PE+LL Y+TP+D+WSVGCIFAE +PLF G SD++QL +I +G P E+
Sbjct: 183 LWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 590 IWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEAL 649
WP LP + F ++ V + + ELG DLL K LT++P RI+A AL
Sbjct: 242 DWPRDVALP---RQAFHSKS-AQPIEKFV--TDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 650 RHDYFSESPLPIDPAM--FPTWPAKSEL 675
H YF + + P SEL
Sbjct: 296 SHPYFQDLERCKENLDSHLPPSQNTSEL 323
Score = 66.8 bits (164), Expect = 7e-12
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 748 GCRSVEEFKCLNRIEEGTYGVVYRAKD-KRTDEIVA 782
CR+ ++++C+ I EG YG V++A+D K VA
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVA 41
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 489 bits (1261), Expect = e-166
Identities = 129/303 (42%), Positives = 193/303 (63%), Gaps = 8/303 (2%)
Query: 361 VEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQH 420
+E F+ + +I EGTYGVVY+A++K T E+VALK+++++ E EG P T++REI+ L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 421 PNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVA 480
PNIV + +++ N K+++V +++ D+K M+ +K + QLL +A
Sbjct: 62 PNIVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 117
Query: 481 HLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLG 540
H + +LHRDLK NLL++ G +K+ DFGLAR +G P++ YT VVTLWYR+PE+LLG
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 541 CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAV 600
K YST +D+WS+GCIFAE + LF G S+++QL RIF+T+GTP+E +WPG + +P
Sbjct: 178 AKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 601 QKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSESPLP 660
K +F ++ V L E G LL + L YDP RI+A AL H +F + P
Sbjct: 238 -KPSFPKWARQ-DFSKVV--PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
Query: 661 IDP 663
+
Sbjct: 294 VPH 296
Score = 62.5 bits (153), Expect = 1e-10
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 752 VEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+E F+ + +I EGTYGVVY+A++K T E+VA
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVA 32
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 485 bits (1251), Expect = e-165
Identities = 127/301 (42%), Positives = 183/301 (60%), Gaps = 10/301 (3%)
Query: 361 VEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQH 420
+++++ L +I EGTYG V++AK++ T EIVALKR++++ + EG P ++LREI L + +H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 421 PNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVA 480
NIV + +++ K+ +V ++ + D+K ++ P VK + QLL +
Sbjct: 61 KNIVRLHDVLHSDK--KLTLVFEFCDQDLKKYFDSC---NGDLDPEIVKSFLFQLLKGLG 115
Query: 481 HLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLG 540
H +LHRDLK NLL++ G LK+ +FGLAR +G P++ Y+ VVTLWYR P++L G
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 541 CKEYSTPIDMWSVGCIFAEFLCM-EPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPA 599
K YST IDMWS GCIFAE PLF G +QL RIF+ +GTP E+ WP +KLP
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235
Query: 600 VQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSESPL 659
+ + YP L V L G DLL L +PV RI+A+EAL+H YFS+
Sbjct: 236 YK--PYPMYPATTSLVNVVPK--LNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP 291
Query: 660 P 660
P
Sbjct: 292 P 292
Score = 62.5 bits (153), Expect = 1e-10
Identities = 15/31 (48%), Positives = 25/31 (80%)
Query: 752 VEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+++++ L +I EGTYG V++AK++ T EIVA
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVA 31
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 485 bits (1252), Expect = e-165
Identities = 125/307 (40%), Positives = 193/307 (62%), Gaps = 9/307 (2%)
Query: 355 IQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINT 414
+ +E+++ L ++ EGTYGVVY+AKD IVALKR++++ E EG P T++REI+
Sbjct: 14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISL 72
Query: 415 LLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQ 474
L + HPNIV++ +++ + +V +++E D+K +++ + ++K + Q
Sbjct: 73 LKELHHPNIVSLIDVIHSER--CLTLVFEFMEKDLKKVLDENK---TGLQDSQIKIYLYQ 127
Query: 475 LLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRS 534
LL VAH H + ILHRDLK NLL++ G LK+ DFGLAR +G P++ YT VVTLWYR+
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 535 PELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGF 594
P++L+G K+YST +D+WS+GCIFAE + +PLF G +D +QL +IF +GTPN + WP
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV 247
Query: 595 SKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYF 654
+LP ++ TF + + + + G DLL L +DP RI+A +A+ H YF
Sbjct: 248 QELPLWKQRTFQVFEKK-PWSSII--PGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
Query: 655 SESPLPI 661
+ I
Sbjct: 305 KDLDPQI 311
Score = 60.6 bits (148), Expect = 6e-10
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 746 IQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ +E+++ L ++ EGTYGVVY+AKD IVA
Sbjct: 14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVA 49
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 485 bits (1252), Expect = e-164
Identities = 123/317 (38%), Positives = 193/317 (60%), Gaps = 14/317 (4%)
Query: 349 PPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITS 408
+ A S++ ++ + ++ EGTYG VY+A D T+E VA+KR+++E E+EG P T+
Sbjct: 21 SMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA 80
Query: 409 LREINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEV 468
+RE++ L + QH NI+ ++ ++ ++ ++ ++ +Y E+D+K M+ +
Sbjct: 81 IREVSLLKELQHRNIIELKSVIHHNH--RLHLIFEYAENDLKKYMDKNPD----VSMRVI 134
Query: 469 KCLMQQLLNAVAHLHDNWILHRDLKTSNLLLS-----HRGILKVGDFGLAREYGSPLKHY 523
K + QL+N V H LHRDLK NLLLS +LK+GDFGLAR +G P++ +
Sbjct: 135 KSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF 194
Query: 524 TPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTM 583
T ++TLWYR PE+LLG + YST +D+WS+ CI+AE L PLF G S+++QL +IF+ +
Sbjct: 195 THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL 254
Query: 584 GTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRI 643
G P++ WPG + LP K +F ++ LK + ++L + G DLL L DPV RI
Sbjct: 255 GLPDDTTWPGVTALPDW-KQSFPKFRG-KTLKRVLG-ALLDDEGLDLLTAMLEMDPVKRI 311
Query: 644 TADEALRHDYFSESPLP 660
+A AL H YFS +
Sbjct: 312 SAKNALEHPYFSHNDFD 328
Score = 73.1 bits (180), Expect = 7e-14
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 740 PPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ A S++ ++ + ++ EGTYG VY+A D T+E VA
Sbjct: 21 SMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVA 63
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 477 bits (1229), Expect = e-161
Identities = 113/316 (35%), Positives = 174/316 (55%), Gaps = 19/316 (6%)
Query: 354 AIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEG---FPITSLR 410
G + ++ + I G YG VY+A+D + VALK +++ G PI+++R
Sbjct: 1 GPLGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVR 60
Query: 411 EINTLLK---AQHPNIVTVREIVVGSNMD---KIFIVMDYVEHDMKSLMETMRSKKQVFI 464
E+ L + +HPN+V + ++ S D K+ +V ++V+ D+++ ++
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LP 118
Query: 465 PGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYT 524
+K LM+Q L + LH N I+HRDLK N+L++ G +K+ DFGLAR Y + T
Sbjct: 119 AETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LT 177
Query: 525 PIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMG 584
P+VVTLWYR+PE+LL Y+TP+DMWSVGCIFAE +PLF G S+ +QL +IF +G
Sbjct: 178 PVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 236
Query: 585 TPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRIT 644
P E WP LP + F +++ V + E G LL + LT++P RI+
Sbjct: 237 LPPEDDWPRDVSLP---RGAFPPRG-PRPVQSVVPE--MEESGAQLLLEMLTFNPHKRIS 290
Query: 645 ADEALRHDYFSESPLP 660
A AL+H Y +
Sbjct: 291 AFRALQHSYLHKDEGN 306
Score = 73.8 bits (182), Expect = 3e-14
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 745 AIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
G + ++ + I G YG VY+A+D + VA
Sbjct: 1 GPLGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVA 38
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 475 bits (1224), Expect = e-161
Identities = 130/297 (43%), Positives = 191/297 (64%), Gaps = 10/297 (3%)
Query: 361 VEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQH 420
+E++ L +I EGTYGVVY+A++ E ALK++++EKE EG P T++REI+ L + +H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 421 PNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVA 480
NIV + +++ ++ +V ++++ D+K L++ + K + QLLN +A
Sbjct: 60 SNIVKLYDVIHTKK--RLVLVFEHLDQDLKKLLDVC---EGGLESVTAKSFLLQLLNGIA 114
Query: 481 HLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLG 540
+ HD +LHRDLK NLL++ G LK+ DFGLAR +G P++ YT +VTLWYR+P++L+G
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 541 CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAV 600
K+YST ID+WSVGCIFAE + PLF G S+ +QL RIF+ +GTPN K WP ++LP
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234
Query: 601 QKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSES 657
F Y + ++ + L E G DLL K L DP RITA +AL H YF E+
Sbjct: 235 -DPNFTVYEPL-PWESFL--KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
Score = 57.1 bits (139), Expect = 7e-09
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 752 VEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+E++ L +I EGTYGVVY+A++ E A
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFA 30
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 475 bits (1224), Expect = e-160
Identities = 122/332 (36%), Positives = 180/332 (54%), Gaps = 14/332 (4%)
Query: 361 VEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQH 420
+E + L+++ EGTY VY+ K K TD +VALK +++E E EG P T++RE++ L +H
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKH 59
Query: 421 PNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVA 480
NIVT+ +I+ + +V +Y++ D+K ++ + VK + QLL +A
Sbjct: 60 ANIVTLHDIIHTEK--SLTLVFEYLDKDLKQYLDDC---GNIINMHNVKLFLFQLLRGLA 114
Query: 481 HLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLG 540
+ H +LHRDLK NLL++ RG LK+ DFGLAR P K Y VVTLWYR P++LLG
Sbjct: 115 YCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 541 CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAV 600
+YST IDMW VGCIF E PLF G + EQL IF+ +GTP E+ WPG
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234
Query: 601 QKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSESP-- 658
+ + +Y L + L G DLL K L ++ RI+A++A++H +F
Sbjct: 235 KTYNYPKYR-AEALLSHA--PRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER 291
Query: 659 ---LPIDPAMFPTWPAKSELAHKKAAMASPKP 687
LP ++F + + +
Sbjct: 292 IHKLPDTTSIFALKEIQLQKEASLRSAHHHHH 323
Score = 55.3 bits (134), Expect = 4e-08
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 752 VEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+E + L+++ EGTY VY+ K K TD +VA
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVA 31
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 467 bits (1205), Expect = e-158
Identities = 99/317 (31%), Positives = 167/317 (52%), Gaps = 7/317 (2%)
Query: 361 VEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQH 420
+E+++ + +I EG+YGVV++ +++ T +IVA+K+ ++ +LREI L + +H
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 421 PNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVA 480
PN+V + E+ ++ +V +Y +H + ++ ++ VK + Q L AV
Sbjct: 62 PNLVNLLEVFRRKR--RLHLVFEYCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVN 116
Query: 481 HLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLG 540
H + +HRD+K N+L++ ++K+ DFG AR P +Y V T WYRSPELL+G
Sbjct: 117 FCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 541 CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAV 600
+Y P+D+W++GC+FAE L PL+ GKSD++QL I KT+G + FS
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236
Query: 601 QKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSESPLP 660
+ + ++ L+ K ++ LL L DP R+T ++ L H YF
Sbjct: 237 SGVKIPDPEDMEPLELKFPN--ISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREI 294
Query: 661 IDPAMFPTWPAKSELAH 677
D A PA++
Sbjct: 295 EDLAKEHDKPAENLYFQ 311
Score = 56.0 bits (136), Expect = 2e-08
Identities = 12/31 (38%), Positives = 25/31 (80%)
Query: 752 VEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+E+++ + +I EG+YGVV++ +++ T +IVA
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVA 32
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 466 bits (1201), Expect = e-157
Identities = 93/318 (29%), Positives = 160/318 (50%), Gaps = 7/318 (2%)
Query: 357 GCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLL 416
+S+E+++ L + EG+YG+V + ++K T IVA+K+ + + ++REI L
Sbjct: 20 YFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLK 79
Query: 417 KAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLL 476
+ +H N+V + E+ + ++V ++V+H + +E V+ + Q++
Sbjct: 80 QLRHENLVNLLEVCKKKK--RWYLVFEFVDHTILDDLELFP---NGLDYQVVQKYLFQII 134
Query: 477 NAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPE 536
N + H + I+HRD+K N+L+S G++K+ DFG AR +P + Y V T WYR+PE
Sbjct: 135 NGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPE 194
Query: 537 LLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSK 596
LL+G +Y +D+W++GC+ E EPLF G SD++QL I +G + F+K
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNK 254
Query: 597 LPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE 656
P + E L+ + L+E+ DL K L DP R E L HD+F
Sbjct: 255 NPVFAGVRLPEIKEREPLERRYPK--LSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312
Query: 657 SPLPIDPAMFPTWPAKSE 674
+ + +
Sbjct: 313 DGFAERFSQELQLKVQKD 330
Score = 64.6 bits (158), Expect = 5e-11
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 748 GCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+S+E+++ L + EG+YG+V + ++K T IVA
Sbjct: 20 YFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVA 54
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 443 bits (1140), Expect = e-147
Identities = 127/396 (32%), Positives = 200/396 (50%), Gaps = 38/396 (9%)
Query: 354 AIQGCRSVEEFKCLN-RIEEGTYGVVYRAKDK--RTDEIVALKRLKMEKEKEGFPITSLR 410
+ + R + F+ ++ GTYG VY+AK K + D+ ALK++ E G +++ R
Sbjct: 12 SSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTGISMSACR 67
Query: 411 EINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMR-----SKKQVFIP 465
EI L + +HPN+++++++ + K++++ DY EHD+ +++ R K
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 466 GEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLS----HRGILKVGDFGLAREYGSPLK 521
G VK L+ Q+L+ + +LH NW+LHRDLK +N+L+ RG +K+ D G AR + SPLK
Sbjct: 128 GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK 187
Query: 522 ---HYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSD------ 572
P+VVT WYR+PELLLG + Y+ ID+W++GCIFAE L EP+F + +
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN 247
Query: 573 ---LEQLSRIFKTMGTPNEKIWPGFSKLPAVQKM----TFAEYPNVGGLKT-KVAGSILT 624
+QL RIF MG P +K W K+P + Y N +K +
Sbjct: 248 PYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPD 307
Query: 625 ELGYDLLCKFLTYDPVTRITADEALRHDYFSESPLPIDPAMFPT---WPAKSELAHKKAA 681
+ LL K LT DP+ RIT+++A++ YF E PLP +P + L ++
Sbjct: 308 SKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPD 367
Query: 682 MASPKPPSGGHNYKQLEDNEEGFHMGMMERSRAPVP 717
K + H G + S P
Sbjct: 368 DKGDKKNQ--QQQQGNNHTNGTGHPGNQDSSHTQGP 401
Score = 48.3 bits (115), Expect = 1e-05
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 11/73 (15%)
Query: 745 AIQGCRSVEEFKCLN-RIEEGTYGVVYRAKDK--RTDEIVAPCKSGNGKFWLENFP-SRI 800
+ + R + F+ ++ GTYG VY+AK K + D+ A K + S
Sbjct: 12 SSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYA-LK----QIEGTGISMSAC 66
Query: 801 RTYHLQVESELNH 813
R L EL H
Sbjct: 67 REIALL--RELKH 77
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 307 bits (787), Expect = 4e-95
Identities = 95/308 (30%), Positives = 149/308 (48%), Gaps = 36/308 (11%)
Query: 364 FKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNI 423
+ I G++GVVY+AK + E+VA+K++ +K + RE+ + K H NI
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 109
Query: 424 VTVREIV--VGSNMDKIFI--VMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
V +R G D++++ V+DYV + + KQ VK M QL ++
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 480 AHLHDNWILHRDLKTSNLLL-SHRGILKVGDFGLAREY--GSPLKHYTPIVVTLWYRSPE 536
A++H I HRD+K NLLL +LK+ DFG A++ G P Y + + +YR+PE
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 226
Query: 537 LLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFS- 595
L+ G +Y++ ID+WS GC+ AE L +P+F G S ++QL I K +GTP + +
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 286
Query: 596 -----KLPAVQKMTFAE--YPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEA 648
K P ++ + + P L + L Y P R+T EA
Sbjct: 287 NYTEFKFPQIKAHPWTKVFRPR------------TPPEAIALCSRLLEYTPTARLTPLEA 334
Query: 649 LRHDYFSE 656
H +F E
Sbjct: 335 CAHSFFDE 342
Score = 41.6 bits (98), Expect = 0.001
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 755 FKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ I G++GVVY+AK + E+VA
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVA 83
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 305 bits (782), Expect = 1e-94
Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 29/311 (9%)
Query: 357 GCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLL 416
G + + I G++GVV++AK +DE VA+K++ +K + RE+ +
Sbjct: 35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKN------RELQIMR 87
Query: 417 KAQHPNIVTVREIVV----GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLM 472
+HPN+V ++ + + +V++YV + KQ +K M
Sbjct: 88 IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM 147
Query: 473 QQLLNAVAHLHDNWILHRDLKTSNLLL-SHRGILKVGDFGLAREYGSPLKHYTPIVVTLW 531
QLL ++A++H I HRD+K NLLL G+LK+ DFG A+ + + + +
Sbjct: 148 YQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-IAGEPNVSYICSRY 206
Query: 532 YRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIW 591
YR+PEL+ G Y+T ID+WS GC+ AE + +PLF G+S ++QL I K +GTP+ +
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266
Query: 592 PGFS------KLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITA 645
+ K P ++ F+ KV DL+ + L Y P R+TA
Sbjct: 267 KTMNPNYMEHKFPQIRPHPFS----------KVFRPRTPPDAIDLISRLLEYTPSARLTA 316
Query: 646 DEALRHDYFSE 656
EAL H +F E
Sbjct: 317 IEALCHPFFDE 327
Score = 39.2 bits (92), Expect = 0.006
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 8/76 (10%)
Query: 707 GMMERSRAPVPGFSWGELDQDVDMEIELEKDTLPPYLPAIQGCRSVEEFKCLNRIEEGTY 766
G S AP+ G LD + L G + + I G++
Sbjct: 1 GSFTMSNAPLNGVKLNPLDDPNKVIKVL-------ASDGKTGEQREIAYTNCKVIGNGSF 53
Query: 767 GVVYRAKDKRTDEIVA 782
GVV++AK +DE VA
Sbjct: 54 GVVFQAKLVESDE-VA 68
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 285 bits (731), Expect = 8e-88
Identities = 89/332 (26%), Positives = 153/332 (46%), Gaps = 36/332 (10%)
Query: 359 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKA 418
+ ++ F+ +GT+G V K+K T VA+K++ + F L+ + L
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---FRNRELQIMQDLAVL 76
Query: 419 QHPNIVTVREIVV---GSNMDKIF--IVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQ 473
HPNIV ++ + I+ +VM+YV + ++ P +K +
Sbjct: 77 HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLF 136
Query: 474 QLLNAVAHLHDNW--ILHRDLKTSNLLL-SHRGILKVGDFGLAREYGSPLKHYTPIVVTL 530
QL+ ++ LH + HRD+K N+L+ G LK+ DFG A++ SP + + +
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL-SPSEPNVAYICSR 195
Query: 531 WYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKI 590
+YR+PEL+ G + Y+T +D+WSVGCIFAE + EP+F G + QL I + +G P+ ++
Sbjct: 196 YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREV 255
Query: 591 WPGFS------KLPAVQKMTFAE-YPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRI 643
+ L + + ++ + + + YDLL L Y P R+
Sbjct: 256 LRKLNPSHTDVDLYNSKGIPWSNVFSDH--------SLKDAKEAYDLLSALLQYLPEERM 307
Query: 644 TADEALRHDYFSE---------SPLPIDPAMF 666
EAL H YF E + + +F
Sbjct: 308 KPYEALCHPYFDELHDPATKLPNNKDLPEDLF 339
Score = 42.7 bits (101), Expect = 4e-04
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 750 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ ++ F+ +GT+G V K+K T VA
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVA 52
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 279 bits (716), Expect = 5e-86
Identities = 84/310 (27%), Positives = 148/310 (47%), Gaps = 35/310 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLK--AQ 419
++++ + ++ G Y V+ A + +E V +K LK K+K+ REI +L+
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREI-KILENLRG 89
Query: 420 HPNIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
PNI+T+ +IV +V ++V + D K L Q +++ M ++L A
Sbjct: 90 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY-------QTLTDYDIRFYMYEILKA 142
Query: 479 VAHLHDNWILHRDLKTSNLLLSH-RGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPEL 537
+ + H I+HRD+K N+++ H L++ D+GLA + P + Y V + +++ PEL
Sbjct: 143 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPEL 201
Query: 538 LLGCKEYSTPIDMWSVGCIFAEFLCM-EPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSK 596
L+ + Y +DMWS+GC+ A + EP F G + +QL RI K +GT + +
Sbjct: 202 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261
Query: 597 ----------LPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITAD 646
L + + + + +++ D L K L YD +R+TA
Sbjct: 262 IELDPRFNDILGRHSRKRWERFVH------SENQHLVSPEALDFLDKLLRYDHQSRLTAR 315
Query: 647 EALRHDYFSE 656
EA+ H YF
Sbjct: 316 EAMEHPYFYT 325
Score = 35.7 bits (83), Expect = 0.071
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
++++ + ++ G Y V+ A + +E V
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVV 65
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 276 bits (708), Expect = 3e-84
Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 62/339 (18%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+++ + G++G+V D + + ALK++ + RE++ + H
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHV 60
Query: 422 NIVTVREIV------------------------------------VGSNMDKIFIVMDYV 445
NI+ + + S + ++M+YV
Sbjct: 61 NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120
Query: 446 EHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLL-SHRGI 504
+ ++++ + + + QL AV +H I HRD+K NLL+ S
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT 180
Query: 505 LKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCME 564
LK+ DFG A++ P + + + +YR+PEL+LG EY+ ID+WS+GC+F E + +
Sbjct: 181 LKLCDFGSAKKL-IPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239
Query: 565 PLFTGKSDLEQLSRIFKTMGTPNEKIWPGFS------KLPAVQKMTFAE-YPNVGGLKTK 617
PLF+G++ ++QL RI + MGTP ++ + + P ++ + + P
Sbjct: 240 PLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEG------ 293
Query: 618 VAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE 656
L DLL + L Y+P RI EA+ H +F
Sbjct: 294 -----TPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327
Score = 41.6 bits (98), Expect = 0.001
Identities = 5/30 (16%), Positives = 14/30 (46%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+++ + G++G+V D + + A
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFA 36
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 266 bits (682), Expect = 1e-79
Identities = 110/445 (24%), Positives = 176/445 (39%), Gaps = 116/445 (26%)
Query: 284 SSQDSSSSDEEENDENEDKADKKEKKAKKRKKEDASPNESERDVSPHVIMDQDVDMEIEL 343
SS +++++ + + + +++ ++++ + P + D +I
Sbjct: 2 SSHEAAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPT--------ASMPRPHSDWQIP- 52
Query: 344 EKDTLPPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEG 403
+ ++ + I G+YG V A DK +VA+K++ E
Sbjct: 53 ------------------DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLI 94
Query: 404 FPITSLREINTLLKA-QHPNIVTVREIVV---GSNMDKIFIVMDYVEHDMKSLMETMRSK 459
LREI +L H ++V V +IV+ D++++V++ + D K L T
Sbjct: 95 DCKRILREI-AILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRT---- 149
Query: 460 KQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSP 519
+K L+ LL V ++H ILHRDLK +N L++ +KV DFGLAR P
Sbjct: 150 PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209
Query: 520 ---------------------------LKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWS 552
+ T VVT WYR+PEL+L + Y+ ID+WS
Sbjct: 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWS 269
Query: 553 VGCIFAEFLCME-----------PLFTGKSDLE--------------------QLSRIFK 581
+GCIFAE L M PLF G S QL+ IF
Sbjct: 270 IGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFN 329
Query: 582 TMGTPNEKIWPGFS---------KLPAVQKMTFAE-YPNVGGLKTKVAGSILTELGYDLL 631
+GTP+E+ P + AE +P + LL
Sbjct: 330 ILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPAS------------SADAIHLL 377
Query: 632 CKFLTYDPVTRITADEALRHDYFSE 656
+ L ++P RIT +E L H +F E
Sbjct: 378 KRMLVFNPNKRITINECLAHPFFKE 402
Score = 40.6 bits (95), Expect = 0.002
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ ++ + I G+YG V A DK +VA
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVA 82
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 256 bits (657), Expect = 9e-78
Identities = 94/320 (29%), Positives = 153/320 (47%), Gaps = 44/320 (13%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ L + G G+V+ A D D+ VA+K++ + + +LREI + + H
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQ--SVKHALREIKIIRRLDHD 68
Query: 422 NIVTVREIV------------VGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVK 469
NIV V EI+ + ++ ++IV +Y+E D+ +++ ++ + +
Sbjct: 69 NIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL-----EQGPLLEEHAR 123
Query: 470 CLMQQLLNAVAHLHDNWILHRDLKTSNLLL-SHRGILKVGDFGLAREYGSPLKHY---TP 525
M QLL + ++H +LHRDLK +NL + + +LK+GDFGLAR H +
Sbjct: 124 LFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 526 IVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGT 585
+VT WYRSP LLL Y+ IDMW+ GCIFAE L + LF G +LEQ+ I +++
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243
Query: 586 PNE----KIWPGFSK----LPAVQKMTFAE-YPNVGGLKTKVAGSILTELGYDLLCKFLT 636
+E ++ + P + + D L + LT
Sbjct: 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGI------------SREAVDFLEQILT 291
Query: 637 YDPVTRITADEALRHDYFSE 656
+ P+ R+TA+EAL H Y S
Sbjct: 292 FSPMDRLTAEEALSHPYMSI 311
Score = 36.1 bits (84), Expect = 0.045
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ L + G G+V+ A D D+ VA
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVA 40
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 257 bits (658), Expect = 1e-77
Identities = 95/309 (30%), Positives = 151/309 (48%), Gaps = 35/309 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ + + G YG V A DKR+ E VA+K+L + E F + RE+ L QH
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 422 NIVTVREIVV----GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLN 477
N++ + ++ N ++VM +++ D++ +M F +++ L+ Q+L
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM------GLKFSEEKIQYLVYQMLK 137
Query: 478 AVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPEL 537
+ ++H ++HRDLK NL ++ LK+ DFGLAR + + Y VVT WYR+PE+
Sbjct: 138 GLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY---VVTRWYRAPEV 194
Query: 538 LLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTP---------NE 588
+L Y+ +D+WSVGCI AE L + LF GK L+QL++I K G P ++
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK 254
Query: 589 KIWPGFSKLPAVQKMTFAE-YPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADE 647
LP + F + +P + DLL K L D R+TA +
Sbjct: 255 AAKSYIQSLPQTPRKDFTQLFPRA------------SPQAADLLEKMLELDVDKRLTAAQ 302
Query: 648 ALRHDYFSE 656
AL H +F
Sbjct: 303 ALTHPFFEP 311
Score = 33.8 bits (78), Expect = 0.30
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ + + G YG V A DKR+ E VA
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVA 53
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 254 bits (651), Expect = 2e-76
Identities = 99/309 (32%), Positives = 150/309 (48%), Gaps = 34/309 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
++ L + G YG V A D RT VA+K+L + E F + RE+ L +H
Sbjct: 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 84
Query: 422 NIVTVREIVV----GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLN 477
N++ + ++ + ++VM ++ D+ LM K + ++ L+ Q+L
Sbjct: 85 NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM-----KHEKLGEDRIQFLVYQMLK 139
Query: 478 AVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPEL 537
+ ++H I+HRDLK NL ++ LK+ DFGLAR+ S + Y VVT WYR+PE+
Sbjct: 140 GLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGY---VVTRWYRAPEV 196
Query: 538 LLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTP---------NE 588
+L Y+ +D+WSVGCI AE + + LF G L+QL I K GTP ++
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD 256
Query: 589 KIWPGFSKLPAVQKMTFAE-YPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADE 647
+ LP ++K FA N + L +LL K L D R+TA E
Sbjct: 257 EAKNYMKGLPELEKKDFASILTNA------------SPLAVNLLEKMLVLDAEQRVTAGE 304
Query: 648 ALRHDYFSE 656
AL H YF
Sbjct: 305 ALAHPYFES 313
Score = 32.7 bits (75), Expect = 0.63
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
++ L + G YG V A D RT VA
Sbjct: 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVA 54
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 252 bits (645), Expect = 2e-75
Identities = 107/311 (34%), Positives = 154/311 (49%), Gaps = 34/311 (10%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ L+ I EG YG+V A D VA+K++ E + + +LREI LL+ +H
Sbjct: 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHE 85
Query: 422 NIVTVREIVV---GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
NI+ + +I+ M ++IV D +E D+ L+ K Q + + Q+L
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRG 140
Query: 479 VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHY---TPIVVTLWYRSP 535
+ ++H +LHRDLK SNLLL+ LK+ DFGLAR H T V T WYR+P
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 536 ELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTP--------- 586
E++L K Y+ ID+WSVGCI AE L P+F GK L+QL+ I +G+P
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 587 NEKIWPGFSKLPAVQKMTFAE-YPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITA 645
N K LP K+ + +PN DLL K LT++P RI
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNA------------DSKALDLLDKMLTFNPHKRIEV 308
Query: 646 DEALRHDYFSE 656
++AL H Y +
Sbjct: 309 EQALAHPYLEQ 319
Score = 33.4 bits (77), Expect = 0.39
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ L+ I EG YG+V A D VA
Sbjct: 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVA 56
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 251 bits (643), Expect = 2e-75
Identities = 105/320 (32%), Positives = 152/320 (47%), Gaps = 44/320 (13%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEK-EKEGFPITSLREINTLLKAQH 420
+F+ + + EG YGVV A K T EIVA+K K+E +K F + +LREI L +H
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK--KIEPFDKPLFALRTLREIKILKHFKH 68
Query: 421 PNIVTVREIVV---GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLN 477
NI+T+ I N ++++I+ + ++ D+ ++ Q+ ++ + Q L
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSDDHIQYFIYQTLR 123
Query: 478 AVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHY----------TPIV 527
AV LH + ++HRDLK SNLL++ LKV DFGLAR V
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183
Query: 528 VTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTP- 586
T WYR+PE++L +YS +D+WS GCI AE P+F G+ QL IF +GTP
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 587 ---------NEKIWPGFSKLPAVQKMTFAE-YPNVGGLKTKVAGSILTELGYDLLCKFLT 636
+ + LP + +P V G DLL + L
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRV------------NPKGIDLLQRMLV 291
Query: 637 YDPVTRITADEALRHDYFSE 656
+DP RITA EAL H Y
Sbjct: 292 FDPAKRITAKEALEHPYLQT 311
Score = 35.3 bits (82), Expect = 0.092
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+F+ + + EG YGVV A K T EIVA
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVA 40
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 250 bits (640), Expect = 8e-75
Identities = 94/307 (30%), Positives = 146/307 (47%), Gaps = 34/307 (11%)
Query: 364 FKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNI 423
++ L+ + G YG V A D +T VA+K+L + + RE+ L +H N+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 424 VTVREIVV----GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
+ + ++ + +++V + D+ +++ K Q V+ L+ Q+L +
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLIYQILRGL 145
Query: 480 AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLL 539
++H I+HRDLK SNL ++ LK+ DFGLAR + Y V T WYR+PE++L
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEIML 202
Query: 540 GCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTP---------NEKI 590
Y+ +D+WSVGCI AE L LF G ++QL I + +GTP +E
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 262
Query: 591 WPGFSKLPAVQKMTFAE-YPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEAL 649
L + KM FA + L DLL K L D RITA +AL
Sbjct: 263 RNYIQSLTQMPKMNFANVFIGA------------NPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 650 RHDYFSE 656
H YF++
Sbjct: 311 AHAYFAQ 317
Score = 30.4 bits (69), Expect = 2.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 755 FKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
++ L+ + G YG V A D +T VA
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVA 58
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 249 bits (639), Expect = 9e-75
Identities = 88/318 (27%), Positives = 141/318 (44%), Gaps = 40/318 (12%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPIT---------SLREI 412
+ I G+YG V D VA+KR+ LREI
Sbjct: 22 SPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80
Query: 413 NTLLKAQHPNIVTVREIVV---GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVK 469
L HPNI+ +R+I V M K+++V + + D+ ++ ++ V P ++
Sbjct: 81 RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI---HDQRIVISPQHIQ 137
Query: 470 CLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVT 529
M +L + LH+ ++HRDL N+LL+ + + DF LARE + + T V
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARED-TADANKTHYVTH 196
Query: 530 LWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEK 589
WYR+PEL++ K ++ +DMWS GC+ AE + LF G + QL++I + +GTP +
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE 256
Query: 590 IWPGF----------SKLPAVQKMTFAE-YPNVGGLKTKVAGSILTELGYDLLCKFLTYD 638
F + L V + P + DL+ K L ++
Sbjct: 257 DVVMFSSPSARDYLRNSLSNVPARAWTAVVPTA------------DPVALDLIAKMLEFN 304
Query: 639 PVTRITADEALRHDYFSE 656
P RI+ ++ALRH YF
Sbjct: 305 PQRRISTEQALRHPYFES 322
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 253 bits (647), Expect = 1e-74
Identities = 87/308 (28%), Positives = 149/308 (48%), Gaps = 21/308 (6%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ ++ L I G G+V A D D VA+K+L + + + RE+ + H
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 422 NIVTVREIVV----GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLN 477
NI+++ + +++VM+ ++ ++ ++ + + L+ Q+L
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLC 175
Query: 478 AVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPEL 537
+ HLH I+HRDLK SN+++ LK+ DFGLAR G+ TP VVT +YR+PE+
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEV 234
Query: 538 LLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTP--------NEK 589
+LG Y +D+WSVGCI E + + LF G+ ++Q +++ + +GTP
Sbjct: 235 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 293
Query: 590 IWPGFSKLPAVQKMTFAE-YPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEA 648
+ P +TF + +P+ + DLL K L DP RI+ D+A
Sbjct: 294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 353
Query: 649 LRHDYFSE 656
L+H Y +
Sbjct: 354 LQHPYINV 361
Score = 33.7 bits (77), Expect = 0.32
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ ++ L I G G+V A D D VA
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVA 91
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 249 bits (637), Expect = 2e-74
Identities = 86/308 (27%), Positives = 143/308 (46%), Gaps = 21/308 (6%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ ++ L I G G+V A D + VA+K+L + + + RE+ + H
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 422 NIVTVREIVV----GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLN 477
NI+ + + ++IVM+ ++ ++ ++ + + L+ Q+L
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLC 138
Query: 478 AVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPEL 537
+ HLH I+HRDLK SN+++ LK+ DFGLAR TP VVT +YR+PE+
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEV 197
Query: 538 LLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFS-- 595
+LG Y +D+WSVGCI E + LF G ++Q +++ + +GTP +
Sbjct: 198 ILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 256
Query: 596 ------KLPAVQKMTFAE-YPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEA 648
P +F + +P+V + DLL K L D RI+ DEA
Sbjct: 257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 316
Query: 649 LRHDYFSE 656
L+H Y +
Sbjct: 317 LQHPYINV 324
Score = 32.7 bits (75), Expect = 0.56
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ ++ L I G G+V A D + VA
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVA 54
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 249 bits (638), Expect = 2e-74
Identities = 94/332 (28%), Positives = 165/332 (49%), Gaps = 43/332 (12%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLK--AQ 419
+++ + ++ +G YG+V+++ D+RT E+VA+K++ + + REI +L +
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREI-MILTELSG 67
Query: 420 HPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
H NIV + ++ N +++V DY+E D+ +++ + + P + ++ QL+ +
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMETDLHAVI-----RANILEPVHKQYVVYQLIKVI 122
Query: 480 AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHY---------------- 523
+LH +LHRD+K SN+LL+ +KV DFGL+R + + +
Sbjct: 123 KYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 524 -----TPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSR 578
T V T WYR+PE+LLG +Y+ IDMWS+GCI E LC +P+F G S + QL R
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER 242
Query: 579 IFKTMGTP---------NEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSIL-----T 624
I + P + L ++ + ++ + I
Sbjct: 243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCN 302
Query: 625 ELGYDLLCKFLTYDPVTRITADEALRHDYFSE 656
E DLL K L ++P RI+A++AL+H + S
Sbjct: 303 EEALDLLDKLLQFNPNKRISANDALKHPFVSI 334
Score = 36.2 bits (84), Expect = 0.055
Identities = 10/30 (33%), Positives = 23/30 (76%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+++ + ++ +G YG+V+++ D+RT E+VA
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVA 38
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 238 bits (609), Expect = 1e-69
Identities = 101/358 (28%), Positives = 158/358 (44%), Gaps = 79/358 (22%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ + + I G+YG VY A DK T++ VA+K++ E LREI L + +
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 422 NIVTVREIVVGSNMDK---IFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
I+ + ++++ ++ K ++IV++ + D+K L +T +K ++ LL
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT----PIFLTEEHIKTILYNLLLG 141
Query: 479 VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHY--------------- 523
+H++ I+HRDLK +N LL+ +KV DFGLAR S
Sbjct: 142 ENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 524 -------TPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCM-----------EP 565
T VVT WYR+PEL+L + Y+ ID+WS GCIFAE L M P
Sbjct: 202 KNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP 261
Query: 566 LFTGKSDLE-----------------QLSRIFKTMGTP---------NEKIWPGFSKLPA 599
LF G S QL+ IF +GTP ++ P
Sbjct: 262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPH 321
Query: 600 VQKMTFAE-YPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE 656
+ + + YP++ ++ G +LL L ++P RIT D+AL H Y +
Sbjct: 322 RKPINLKQKYPSI------------SDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
Score = 36.6 bits (85), Expect = 0.037
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ + + I G+YG VY A DK T++ VA
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVA 55
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 206 bits (527), Expect = 4e-60
Identities = 69/321 (21%), Positives = 121/321 (37%), Gaps = 61/321 (19%)
Query: 359 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKA 418
R +F+ + + +G +G V +A++ A+K+++ +EK T L E+ L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL---STILSEVMLLASL 59
Query: 419 QHPNIVTVRE-----------IVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGE 467
H +V + +FI M+Y E+ +L + + S+ E
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCEN--GTLYDLIHSENLNQQRDE 117
Query: 468 VKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIV 527
L +Q+L A++++H I+HRDLK N+ + +K+GDFGLA+ L
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 528 V--------------TLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDL 573
T Y + E+L G Y+ IDM+S+G IF E + P TG +
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERV 235
Query: 574 EQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCK 633
L ++ K+ +K ++
Sbjct: 236 NILKKLRSVSIEFPPDFDDNKMKV---EK--------------------------KIIRL 266
Query: 634 FLTYDPVTRITADEALRHDYF 654
+ +DP R A L +
Sbjct: 267 LIDHDPNKRPGARTLLNSGWL 287
Score = 36.2 bits (84), Expect = 0.049
Identities = 7/33 (21%), Positives = 16/33 (48%)
Query: 750 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
R +F+ + + +G +G V +A++ A
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYA 35
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 199 bits (507), Expect = 1e-57
Identities = 79/305 (25%), Positives = 130/305 (42%), Gaps = 47/305 (15%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKM----EKEKEGFPITSLREINTLLK 417
E+++ L I G+YG + + K +I+ K L E EK+ + E+N L +
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQ----MLVSEVNLLRE 61
Query: 418 AQHPNIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQQLL 476
+HPNIV + ++ ++IVM+Y E D+ S++ ++Q V +M QL
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121
Query: 477 NAVAHLHD-----NWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLW 531
A+ H + +LHRDLK +N+ L + +K+GDFGLAR V T +
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPY 181
Query: 532 YRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIW 591
Y SPE + Y+ D+WS+GC+ E + P FT S E +I + G +I
Sbjct: 182 YMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--GKF-RRIP 237
Query: 592 PGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
+S L +++ + L R + +E L +
Sbjct: 238 YRYSD----------------ELN-------------EIITRMLNLKDYHRPSVEEILEN 268
Query: 652 DYFSE 656
E
Sbjct: 269 PLILE 273
Score = 35.3 bits (82), Expect = 0.077
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
E+++ L I G+YG + + K +I+
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILV 35
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 189 bits (483), Expect = 3e-54
Identities = 73/313 (23%), Positives = 120/313 (38%), Gaps = 62/313 (19%)
Query: 359 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKA 418
R +FK + I G +G V++AK + + +KR+K EK + RE+ L K
Sbjct: 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEK------AEREVKALAKL 61
Query: 419 QHPNIV--------------TVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFI 464
H NIV T + S +FI M++ + +L + + ++ +
Sbjct: 62 DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDK--GTLEQWIEKRRGEKL 119
Query: 465 P-GEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHY 523
L +Q+ V ++H +++RDLK SN+ L +K+GDFGL + K
Sbjct: 120 DKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRT 179
Query: 524 TPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTM 583
TL Y SPE + ++Y +D++++G I AE L T + + +
Sbjct: 180 R-SKGTLRYMSPEQISS-QDYGKEVDLYALGLILAELLH--VCDTAFETSKFFTDL---- 231
Query: 584 GTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRI 643
+ I F K K LL K L+ P R
Sbjct: 232 --RDGIISDIFDK----------------KEK-------------TLLQKLLSKKPEDRP 260
Query: 644 TADEALRHDYFSE 656
E LR +
Sbjct: 261 NTSEILRTLTVWK 273
Score = 36.1 bits (84), Expect = 0.044
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 750 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
R +FK + I G +G V++AK + +
Sbjct: 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYV 40
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 187 bits (476), Expect = 3e-53
Identities = 79/329 (24%), Positives = 129/329 (39%), Gaps = 68/329 (20%)
Query: 359 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLK---MEKEKEGFPITSLREINTL 415
R + +F+ + + G +GVV+ AK+K D A+KR++ E +E +RE+ L
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELARE----KVMREVKAL 57
Query: 416 LKAQHPNIV----------TVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIP 465
K +HP IV T ++ S ++I M ++L + M + +
Sbjct: 58 AKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRK--ENLKDWMNGRCTIEER 115
Query: 466 GEVKCL--MQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR--------- 514
CL Q+ AV LH ++HRDLK SN+ + ++KVGDFGL
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 515 ---EYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKS 571
+T V T Y SPE + G YS +D++S+G I E L P T
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHG-NSYSHKVDIFSLGLILFELLY--PFSTQME 232
Query: 572 DLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLL 631
+ L+ + N K P F++ + ++
Sbjct: 233 RVRTLTDV------RNLKFPPLFTQKYPCEY--------------------------VMV 260
Query: 632 CKFLTYDPVTRITADEALRHDYFSESPLP 660
L+ P+ R A + + F + P
Sbjct: 261 QDMLSPSPMERPEAINIIENAVFEDLDFP 289
Score = 35.4 bits (82), Expect = 0.088
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 750 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
R + +F+ + + G +GVV+ AK+K D A
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYA 34
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 187 bits (476), Expect = 2e-52
Identities = 80/350 (22%), Positives = 146/350 (41%), Gaps = 48/350 (13%)
Query: 359 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKM----EKEKEGFPITSLREINT 414
+S+E++ L +I EG++G K +K + + KE+E S RE+
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKERE----ESRREVAV 76
Query: 415 LLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQ 473
L +HPNIV RE + ++IVMDY E D+ + K +F ++
Sbjct: 77 LANMKHPNIVQYRESFEENG--SLYIVMDYCEGGDLFKRIN--AQKGVLFQEDQILDWFV 132
Query: 474 QLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYR 533
Q+ A+ H+HD ILHRD+K+ N+ L+ G +++GDFG+AR S ++ + T +Y
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYL 192
Query: 534 SPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPG 593
SPE+ K Y+ D+W++GC+ E ++ F S ++ L + K + +
Sbjct: 193 SPEICEN-KPYNNKSDIWALGCVLYELCTLKHAFEAGS-MKNL--VLKIISGSFPPVSLH 248
Query: 594 FSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDY 653
+S L+ L+ + +P R + + L +
Sbjct: 249 YSY----------------DLR-------------SLVSQLFKRNPRDRPSVNSILEKGF 279
Query: 654 FSESPLPIDPAMFPTWPAKSELAHKKAAMASP--KPPSGGHNYKQLEDNE 701
++ + K + P +P SG ++ + +
Sbjct: 280 IAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASGQNSISVMPAQK 329
Score = 35.1 bits (81), Expect = 0.097
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 750 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+S+E++ L +I EG++G K
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYV 53
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 184 bits (469), Expect = 5e-52
Identities = 76/319 (23%), Positives = 127/319 (39%), Gaps = 48/319 (15%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ L +I G V++ ++ +I A+K + +E+ + EI L K Q
Sbjct: 28 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 86
Query: 422 NIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAH 481
+ +R I++VM+ D+ S ++ KK+ P E K + +L AV
Sbjct: 87 SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK----KKKSIDPWERKSYWKNMLEAVHT 142
Query: 482 LHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREY--GSPLKHYTPIVVTLWYRSPELLL 539
+H + I+H DLK +N L+ G+LK+ DFG+A + + V T+ Y PE +
Sbjct: 143 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 201
Query: 540 GC----------KEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEK 589
+ S D+WS+GCI + F + Q+S++ + PN +
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--QISKLHA-IIDPNHE 258
Query: 590 IWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEAL 649
I E+P I + D+L L DP RI+ E L
Sbjct: 259 I----------------EFP-----------DIPEKDLQDVLKCCLKRDPKQRISIPELL 291
Query: 650 RHDYFSESPLPIDPAMFPT 668
H Y P++ T
Sbjct: 292 AHPYVQIQTHPVNQMAKGT 310
Score = 30.4 bits (69), Expect = 3.4
Identities = 6/30 (20%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ L +I G V++ ++ +I A
Sbjct: 28 RIYSILKQIGSGGSSKVFQVLNE-KKQIYA 56
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 185 bits (470), Expect = 1e-51
Identities = 50/323 (15%), Positives = 93/323 (28%), Gaps = 56/323 (17%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSL-REINTLLKAQHPNIVTVRE-- 428
G VV+ +D E ALK M E + L + + R+
Sbjct: 72 VGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRR 131
Query: 429 -------IVVGSNMDKI---------------FIVMDYVEHDMKSLMETMR---SKKQVF 463
V + ++M D++ L T+ +
Sbjct: 132 RLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDE 191
Query: 464 IPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHY 523
+ L QL+ A+L ++H NL + G L +GD + G+
Sbjct: 192 GILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG--- 248
Query: 524 TPIVVTLWYRSPELLLG-CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKT 582
V + Y E L ++ ++ W +G C+ F + + S +
Sbjct: 249 PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPS 308
Query: 583 MGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTR 642
+ P F + + L+ +FL +D R
Sbjct: 309 LRVPGTDSLA------------FGSCTPLP------------DFVKTLIGRFLNFDRRRR 344
Query: 643 ITADEALRHDYFSESPLPIDPAM 665
+ EA+ F + I ++
Sbjct: 345 LLPLEAMETPEFLQLQNEISSSL 367
Score = 35.0 bits (80), Expect = 0.11
Identities = 7/23 (30%), Positives = 9/23 (39%), Gaps = 1/23 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCK 785
G VV+ +D E A K
Sbjct: 72 VGDRSVVFLVRDVERLEDFA-LK 93
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 181 bits (461), Expect = 5e-51
Identities = 75/309 (24%), Positives = 117/309 (37%), Gaps = 43/309 (13%)
Query: 349 PPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITS 408
P Y P+ + F+ L+R+ G+YG V++ + K + A+KR
Sbjct: 44 PGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARK 103
Query: 409 LREINTLLK-AQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGE 467
L E+ + K QHP V + + +++ + SL + + +
Sbjct: 104 LAEVGSHEKVGQHPCCVRLEQAWEEG--GILYLQTELCGP---SLQQHCEAWGASLPEAQ 158
Query: 468 VKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIV 527
V ++ L A+AHLH ++H D+K +N+ L RG K+GDFGL E G+
Sbjct: 159 VWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV-QE 217
Query: 528 VTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPN 587
Y +PELL G Y T D++S+G E C L G +QL + G
Sbjct: 218 GDPRYMAPELLQG--SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ-----GYLP 270
Query: 588 EKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADE 647
+ G S EL +L L DP R TA+
Sbjct: 271 PEFTAGLSS----------------------------EL-RSVLVMMLEPDPKLRATAEA 301
Query: 648 ALRHDYFSE 656
L +
Sbjct: 302 LLALPVLRQ 310
Score = 39.2 bits (92), Expect = 0.005
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 740 PPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
P Y P+ + F+ L+R+ G+YG V++ + K + A
Sbjct: 44 PGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYA 86
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 179 bits (457), Expect = 4e-50
Identities = 78/339 (23%), Positives = 135/339 (39%), Gaps = 52/339 (15%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ L +I G V++ ++ +I A+K + +E+ + EI L K Q
Sbjct: 9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 67
Query: 422 N--IVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
+ I+ + + + I++VM+ D+ S ++ KK+ P E K + +L AV
Sbjct: 68 SDKIIRLYDYEI--TDQYIYMVMECGNIDLNSWLK----KKKSIDPWERKSYWKNMLEAV 121
Query: 480 AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREY--GSPLKHYTPIVVTLWYRSPEL 537
+H + I+H DLK +N L+ G+LK+ DFG+A + + V T+ Y PE
Sbjct: 122 HTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 180
Query: 538 LLG----------CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPN 587
+ + S D+WS+GCI + F + Q+S++ + PN
Sbjct: 181 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--QISKLHA-IIDPN 237
Query: 588 EKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADE 647
+I E+P I + D+L L DP RI+ E
Sbjct: 238 HEI----------------EFP-----------DIPEKDLQDVLKCCLKRDPKQRISIPE 270
Query: 648 ALRHDYFSESPLPIDPAMFPTWPAKSELAHKKAAMASPK 686
L H Y P++ T + + + SP
Sbjct: 271 LLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPN 309
Score = 30.1 bits (68), Expect = 3.7
Identities = 6/30 (20%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ L +I G V++ ++ +I A
Sbjct: 9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYA 37
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 178 bits (453), Expect = 6e-50
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 42/306 (13%)
Query: 352 LPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKM-----EKEKEGFPI 406
L G ++ F+ +I G + VYRA VALK++++ K +
Sbjct: 22 LRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARA---- 77
Query: 407 TSLREINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIP 465
++EI+ L + HPN++ + +++ IV++ + D+ +++ + +K++
Sbjct: 78 DCIKEIDLLKQLNHPNVIKYYASFIED--NELNIVLELADAGDLSRMIKHFKKQKRLIPE 135
Query: 466 GEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTP 525
V QL +A+ H+H ++HRD+K +N+ ++ G++K+GD GL R + S
Sbjct: 136 RTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS 195
Query: 526 IVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGT 585
+V T +Y SPE + Y+ D+WS+GC+ E ++ F G
Sbjct: 196 LVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDK-------------- 240
Query: 586 PNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITA 645
+ +K+ +YP + +E L+ + DP R
Sbjct: 241 --------MNLYSLCKKIEQCDYP-------PLPSDHYSEELRQLVNMCINPDPEKRPDV 285
Query: 646 DEALRH 651
Sbjct: 286 TYVYDV 291
Score = 36.5 bits (85), Expect = 0.031
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 743 LPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
L G ++ F+ +I G + VYRA VA
Sbjct: 22 LRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVA 61
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 173 bits (441), Expect = 2e-48
Identities = 74/312 (23%), Positives = 127/312 (40%), Gaps = 46/312 (14%)
Query: 353 PAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALK---RLKMEKEKEGFPITSL 409
+ RS + + +G + + D T E+ A K + + K + ++
Sbjct: 6 EVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS-- 63
Query: 410 REINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVK 469
EI+ H ++V + D +F+V++ +SL+E + +K E +
Sbjct: 64 MEISIHRSLAHQHVVGFHGFF--EDNDFVFVVLELCRR--RSLLELHKRRKA-LTEPEAR 118
Query: 470 CLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSP-LKHYTPIVV 528
++Q++ +LH N ++HRDLK NL L+ +K+GDFGLA + + +
Sbjct: 119 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCG 177
Query: 529 TLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNE 588
T Y +PE+L K +S +D+WS+GCI L +P F E RI K NE
Sbjct: 178 TPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NE 231
Query: 589 KIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEA 648
P + + L+ K L DP R T +E
Sbjct: 232 YSIPKH----------------------------INPVAASLIQKMLQTDPTARPTINEL 263
Query: 649 LRHDYFSESPLP 660
L ++F+ +P
Sbjct: 264 LNDEFFTSGYIP 275
Score = 32.2 bits (74), Expect = 0.87
Identities = 7/39 (17%), Positives = 14/39 (35%)
Query: 744 PAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ RS + + +G + + D T E+ A
Sbjct: 6 EVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFA 44
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 173 bits (441), Expect = 3e-48
Identities = 54/296 (18%), Positives = 109/296 (36%), Gaps = 27/296 (9%)
Query: 372 EGTYGVVYRAKDKRTDEIVALK---RLKMEKEKEGFPITSLREINTLLKAQHPNIVTVRE 428
+G V+R + K+T ++ A+K + + + +RE L K H NIV +
Sbjct: 19 QGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ----MREFEVLKKLNHKNIVKLFA 74
Query: 429 IVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGE--VKCLMQQLLNAVAHLHDNW 486
I + ++M++ SL + + E +++ ++ + HL +N
Sbjct: 75 IEEETTTRHKVLIMEFCPC--GSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 487 ILHRDLKTSNLLLS----HRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGC- 541
I+HR++K N++ + + K+ DFG ARE + + + T Y P++
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS-LYGTEEYLHPDMYERAV 191
Query: 542 ------KEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFS 595
K+Y +D+WS+G F F + + + T
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGV 251
Query: 596 KLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
+ + ++ V ++ +LT +L L D D+
Sbjct: 252 QKAENGPIDWSGDMPVSCSLSRGLQVLLT----PVLANILEADQEKCWGFDQFFAE 303
Score = 32.0 bits (73), Expect = 1.0
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 763 EGTYGVVYRAKDKRTDEIVA 782
+G V+R + K+T ++ A
Sbjct: 19 QGATANVFRGRHKKTGDLFA 38
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 173 bits (441), Expect = 5e-48
Identities = 80/351 (22%), Positives = 138/351 (39%), Gaps = 47/351 (13%)
Query: 344 EKDTLPPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALK---RLKMEKE 400
+ RS + + +G + + D T E+ A K + + K
Sbjct: 23 AAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP 82
Query: 401 KEGFPITSLREINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKK 460
+ ++ EI+ H ++V + D +F+V++ +SL+E + +K
Sbjct: 83 HQREKMS--MEISIHRSLAHQHVVGFHGFF--EDNDFVFVVLELCRR--RSLLELHKRRK 136
Query: 461 QVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSP- 519
E + ++Q++ +LH N ++HRDLK NL L+ +K+GDFGLA +
Sbjct: 137 A-LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195
Query: 520 LKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRI 579
+ + T Y +PE+L K +S +D+WS+GCI L +P F E RI
Sbjct: 196 ERKKV-LCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 253
Query: 580 FKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDP 639
K NE P + + L+ K L DP
Sbjct: 254 KK-----NEYSIPKH----------------------------INPVAASLIQKMLQTDP 280
Query: 640 VTRITADEALRHDYFSESPLPID-PAMFPTWPAKSELAHKKAAMASPKPPS 689
R T +E L ++F+ +P P T P + +A ++ KP +
Sbjct: 281 TARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPLT 331
Score = 33.0 bits (76), Expect = 0.43
Identities = 7/48 (14%), Positives = 14/48 (29%)
Query: 735 EKDTLPPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ RS + + +G + + D T E+ A
Sbjct: 23 AAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFA 70
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 174 bits (443), Expect = 3e-47
Identities = 86/322 (26%), Positives = 143/322 (44%), Gaps = 47/322 (14%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTL--LKAQHP----NIVT 425
+G++G V +A D + + VALK ++ ++ F + EI L L+ Q N++
Sbjct: 107 KGSFGQVVKAYDHKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 426 VREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKK-QVFIPGEVKCLMQQLLNAVAHLHD 484
+ E N I + + + +L E ++ K Q F V+ +L + LH
Sbjct: 164 MLENFTFRN--HICMTFELLS---MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 485 NWILHRDLKTSNLLLSH--RGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCK 542
N I+H DLK N+LL R +KV DFG + + + + +YR+PE++LG +
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH---QRVYTYIQSRFYRAPEVILGAR 275
Query: 543 EYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKI------------ 590
Y PIDMWS+GCI AE L PL G+ + +QL+ + + +G P++K+
Sbjct: 276 -YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334
Query: 591 WPGFSKLPAVQKMTFAEYPNVGG------LKTKVAGSILTELG--------YDLLCKFLT 636
G+ + V ++ GG L+ D L + L
Sbjct: 335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394
Query: 637 YDPVTRITADEALRHDYFSESP 658
+DP R+T +ALRH +
Sbjct: 395 WDPAVRMTPGQALRHPWLRRRL 416
Score = 30.1 bits (68), Expect = 4.7
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 763 EGTYGVVYRAKDKRTDEIVA 782
+G++G V +A D + + VA
Sbjct: 107 KGSFGQVVKAYDHKVHQHVA 126
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 173 bits (439), Expect = 3e-47
Identities = 77/337 (22%), Positives = 131/337 (38%), Gaps = 48/337 (14%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ L +I G V++ ++ +I A+K + +E+ + EI L K Q
Sbjct: 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 114
Query: 422 NIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAH 481
+ +R I++VM+ D+ S ++ KK+ P E K + +L AV
Sbjct: 115 SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK----KKKSIDPWERKSYWKNMLEAVHT 170
Query: 482 LHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREY--GSPLKHYTPIVVTLWYRSPELLL 539
+H + I+H DLK +N L+ G+LK+ DFG+A + + V + Y PE +
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK 229
Query: 540 G----------CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEK 589
+ S D+WS+GCI + F + Q+S++ + PN +
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--QISKLHA-IIDPNHE 286
Query: 590 IWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEAL 649
I E+P I + D+L L DP RI+ E L
Sbjct: 287 I----------------EFP-----------DIPEKDLQDVLKCCLKRDPKQRISIPELL 319
Query: 650 RHDYFSESPLPIDPAMFPTWPAKSELAHKKAAMASPK 686
H Y P++ T + + + SP
Sbjct: 320 AHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPN 356
Score = 29.0 bits (65), Expect = 9.7
Identities = 6/30 (20%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ L +I G V++ ++ +I A
Sbjct: 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYA 84
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 168 bits (429), Expect = 4e-47
Identities = 75/304 (24%), Positives = 133/304 (43%), Gaps = 41/304 (13%)
Query: 359 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRL-KMEKEKEGFPITSLREINTLLK 417
+E+FK N + +G++ VYRA+ T VA+K + K K G E+ +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 418 AQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLN 477
+HP+I+ + + + +++V++ + + ++++ + F E + M Q++
Sbjct: 68 LKHPSILELYN--YFEDSNYVYLVLEMCHN--GEMNRYLKNRVKPFSENEARHFMHQIIT 123
Query: 478 AVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSP-LKHYTPIVVTLWYRSPE 536
+ +LH + ILHRDL SNLLL+ +K+ DFGLA + P KHYT + T Y SPE
Sbjct: 124 GMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPE 182
Query: 537 LLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSK 596
+ + D+WS+GC+F L P F + L+++ + P F
Sbjct: 183 IATR-SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL-----ADYEMPSFLS 236
Query: 597 LPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE 656
+ A DL+ + L +P R++ L H + S
Sbjct: 237 IEAK----------------------------DLIHQLLRRNPADRLSLSSVLDHPFMSR 268
Query: 657 SPLP 660
+
Sbjct: 269 NSST 272
Score = 31.7 bits (73), Expect = 1.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 750 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+E+FK N + +G++ VYRA+ T VA
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVA 40
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 168 bits (427), Expect = 2e-46
Identities = 53/313 (16%), Positives = 106/313 (33%), Gaps = 46/313 (14%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ + + ++ EG + V + ALKR+ ++++ + RE + HP
Sbjct: 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD--REEAQREADMHRLFNHP 86
Query: 422 NIVTVRE--IVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
NI+ + + + ++++ + + + + +E ++ K ++ L+ +
Sbjct: 87 NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146
Query: 479 VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVV---------T 529
+ +H HRDLK +N+LL G + D G + ++ + T
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 530 LWYRSPELLLG--CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPN 587
+ YR+PEL D+WS+GC+ + E + + S +
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF-QKGDSVALAVQNQLS 265
Query: 588 EKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADE 647
P S L LL +T DP R
Sbjct: 266 IPQSPRHSS----------------ALW-------------QLLNSMMTVDPHQRPHIPL 296
Query: 648 ALRHDYFSESPLP 660
L + P P
Sbjct: 297 LLSQLEALQPPAP 309
Score = 32.3 bits (74), Expect = 0.78
Identities = 4/30 (13%), Positives = 11/30 (36%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ + + ++ EG + V + A
Sbjct: 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYA 58
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 167 bits (425), Expect = 8e-46
Identities = 82/340 (24%), Positives = 129/340 (37%), Gaps = 74/340 (21%)
Query: 372 EGTYGVVYRAKD-KRTDEIVALKRLKMEKEKEGFPITSLREINTL--LKAQHP----NIV 424
EG +G V D K VA+K +K + + + EI L L P V
Sbjct: 24 EGAFGKVVECIDHKAGGRHVAVKIVK---NVDRYCEAARSEIQVLEHLNTTDPNSTFRCV 80
Query: 425 TVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGE-VKCLMQQLLNAVAHLH 483
+ E I IV + + S + ++ + + ++ + Q+ +V LH
Sbjct: 81 QMLEWFEHHG--HICIVFELLG---LSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH 135
Query: 484 DNWILHRDLKTSNLLLSH-------------------RGILKVGDFGLA---REYGSPLK 521
N + H DLK N+L +KV DFG A E+
Sbjct: 136 SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH----- 190
Query: 522 HYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFK 581
H T +V T YR+PE++L +S P D+WS+GCI E+ +F E L+ + +
Sbjct: 191 HST-LVSTRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 582 TMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGL---------KTKVAGS----------- 621
+G + + +QK +Y + L +
Sbjct: 249 ILGPLPKHM---------IQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQD 299
Query: 622 ILTELGYDLLCKFLTYDPVTRITADEALRHDYFSESPLPI 661
+ E +DL+ K L YDP RIT EAL+H +F I
Sbjct: 300 VEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI 339
>4dbg_B Ring finger protein 31; ubiquitin fold, ubiquitination, ligase; 2.71A
{Homo sapiens}
Length = 162
Score = 161 bits (407), Expect = 9e-46
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 877 QGMEMVKLLREAEQNGFTAEDLTIALSHCGDGPPVTWLINNWRHMIDTVVTLATNYGHER 936
+G+++V ++RE E G E++ AL + G P+ WL + ++++ V LA
Sbjct: 13 EGLQLVSMIREGEAAGACPEEIFSALQYSGTEVPLQWLRSELPYVLEMVAELAGQQ---- 68
Query: 937 SENNVGTLSAVEARDALRLHNGNVWAAVTECVETRQKKFNDLMSRGNFTREDIVTVLTAN 996
+ +G S EAR A +GN+ AV ECV TR++K +L S G E + L +
Sbjct: 69 -DPGLGAFSCQEARRAWLDRHGNLDEAVEECVRTRRRKVQELQSLGFGPEEGSLQALFQH 127
Query: 997 HGNVESAYVELNKTQLKPFLMRIW--GPP 1023
G+V A EL + +L+PF R+W GP
Sbjct: 128 GGDVSRALTELQRQRLEPFRQRLWDSGPE 156
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 167 bits (426), Expect = 1e-45
Identities = 69/331 (20%), Positives = 130/331 (39%), Gaps = 62/331 (18%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLK-----------AQH 420
G + V+ AKD + VA+K ++ + + + EI L +
Sbjct: 29 WGHFSTVWLAKDMVNNTHVAMKIVR---GDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 421 PNIVTVRE--IVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
+I+ + + G N + +V + + ++ +L++ + + + VK + +QLL
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK--KYEHRGIPLIYVKQISKQLLLG 143
Query: 479 VAHLHDNW-ILHRDLKTSNLLLSH------RGILKVGDFGLAREYGSPLKHYTPIVVTLW 531
+ ++H I+H D+K N+L+ +K+ D G A Y +HYT + T
Sbjct: 144 LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD---EHYTNSIQTRE 200
Query: 532 YRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKS------DLEQLSRIFKTMGT 585
YRSPE+LLG + D+WS C+ E + + LF D + +++I + +G
Sbjct: 201 YRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE 259
Query: 586 PNEKIWPGFSKLPAVQKMTFA--------EYPNVGGLKTKVAGSILTELG---------- 627
+ ++ + N+ LK +LTE
Sbjct: 260 LPSYL---------LRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI 310
Query: 628 YDLLCKFLTYDPVTRITADEALRHDYFSESP 658
D L L DP R A + H + ++
Sbjct: 311 SDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 341
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 167 bits (425), Expect = 2e-45
Identities = 89/350 (25%), Positives = 154/350 (44%), Gaps = 54/350 (15%)
Query: 351 YLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLR 410
G + ++ ++ + I +G++G V +A D+ E VA+K +K K+ F +
Sbjct: 43 DYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK---NKKAFLNQAQI 99
Query: 411 EINTL--LKAQHP----NIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRS-KKQVF 463
E+ L + IV ++ + N + +V + + +L + +R+ +
Sbjct: 100 EVRLLELMNKHDTEMKYYIVHLKRHFMFRN--HLCLVFEMLS---YNLYDLLRNTNFRGV 154
Query: 464 IPGEVKCLMQQLLNAVAHLHDNW--ILHRDLKTSNLLLSH--RGILKVGDFGLAREYGSP 519
+ QQ+ A+ L I+H DLK N+LL + R +K+ DFG + + G
Sbjct: 155 SLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-- 212
Query: 520 LKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRI 579
+ + + +YRSPE+LLG Y IDMWS+GCI E EPLF+G ++++Q+++I
Sbjct: 213 -QRIYQYIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 270
Query: 580 FKTMGTPNEKI------------------WP--------GFSKLPAVQKMTFAEYPNVGG 613
+ +G P I W K P +K+ GG
Sbjct: 271 VEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGG 330
Query: 614 LKTKVAGSILTELG-----YDLLCKFLTYDPVTRITADEALRHDYFSESP 658
+ AG + DL+ + L YDP TRI AL+H +F ++
Sbjct: 331 PGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 380
Score = 30.8 bits (70), Expect = 2.3
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 742 YLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
G + ++ ++ + I +G++G V +A D+ E VA
Sbjct: 43 DYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVA 83
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 165 bits (420), Expect = 5e-45
Identities = 69/342 (20%), Positives = 120/342 (35%), Gaps = 70/342 (20%)
Query: 364 FKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTL--LKAQHP 421
F + ++ +GT+G V + + A+K + + + + ++ E + L ++
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVK---VVRNIKKYTRSAKIEADILKKIQNDDI 93
Query: 422 NIVTVREIVVGSNMDKIFIVMDYVEH-----DM--KSLMETMRSKKQVFIPGE-VKCLMQ 473
N +N+ K Y +H + SL E + E +K
Sbjct: 94 N---------NNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCI 144
Query: 474 QLLNAVAHLHDNWILHRDLKTSNLLLSH-------------------------RGILKVG 508
++L A+ +L + H DLK N+LL +K+
Sbjct: 145 EILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLI 204
Query: 509 DFGLA---REYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEP 565
DFG A +Y H + I+ T YR+PE++L + DMWS GC+ AE
Sbjct: 205 DFGCATFKSDY-----HGS-IINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSL 257
Query: 566 LFTGKSDLEQLSRIFKTMGTPNEKI-------------WPGFSKLPAVQKMTFAEYPNVG 612
LF +E L+ + + + + KL + +
Sbjct: 258 LFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHV 317
Query: 613 GLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYF 654
+ I EL D L L DP R + E L+H +
Sbjct: 318 KKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
Score = 29.2 bits (66), Expect = 6.9
Identities = 6/28 (21%), Positives = 13/28 (46%)
Query: 755 FKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
F + ++ +GT+G V + + A
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYA 64
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 164 bits (417), Expect = 3e-44
Identities = 53/296 (17%), Positives = 106/296 (35%), Gaps = 27/296 (9%)
Query: 372 EGTYGVVYRAKDKRTDEIVALK---RLKMEKEKEGFPITSLREINTLLKAQHPNIVTVRE 428
+G V+R + K+T ++ A+K + + + +RE L K H NIV +
Sbjct: 19 QGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ----MREFEVLKKLNHKNIVKLFA 74
Query: 429 IVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGE--VKCLMQQLLNAVAHLHDNW 486
I + ++M++ SL + + E +++ ++ + HL +N
Sbjct: 75 IEEETTTRHKVLIMEFCP--CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 487 ILHRDLKTSNLLLS----HRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGC- 541
I+HR++K N++ + + K+ DFG ARE + + + T Y P++
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS-LYGTEEYLHPDMYERAV 191
Query: 542 ------KEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFS 595
K+Y +D+WS+G F F + + + T
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGV 251
Query: 596 KLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
+ + ++ + L L +L L D D+
Sbjct: 252 QKAENGPIDWSGDM----PVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303
Score = 31.4 bits (71), Expect = 1.5
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 763 EGTYGVVYRAKDKRTDEIVA 782
+G V+R + K+T ++ A
Sbjct: 19 QGATANVFRGRHKKTGDLFA 38
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 162 bits (413), Expect = 5e-44
Identities = 84/351 (23%), Positives = 133/351 (37%), Gaps = 74/351 (21%)
Query: 372 EGTYGVVYRAKD-KRTDEIVALKRLKMEKEKEGFPITSLREINTL--LKAQHP----NIV 424
EGT+G V D R VALK + + + + EIN L +K + V
Sbjct: 29 EGTFGKVVECLDHARGKSQVALK---IIRNVGKYREAARLEINVLKKIKEKDKENKFLCV 85
Query: 425 TVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGE-VKCLMQQLLNAVAHLH 483
+ + + I + + K+ E ++ P V+ + QL +A+ LH
Sbjct: 86 LMSDWFNFHG--HMCIAFELLG---KNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 140
Query: 484 DNWILHRDLKTSNLLLSH-------------------RGILKVGDFGLA---REYGSPLK 521
+N + H DLK N+L + ++V DFG A E+
Sbjct: 141 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH----- 195
Query: 522 HYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFK 581
H T IV T YR PE++L ++ P D+WS+GCI E+ LF + E L + K
Sbjct: 196 HTT-IVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 253
Query: 582 TMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGL--------------KTKVAGSILT--- 624
+G + + + +Y GGL K S +
Sbjct: 254 ILGPIPSHM---------IHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDS 304
Query: 625 ---ELGYDLLCKFLTYDPVTRITADEALRHDYFSESPLPIDPAMFPTWPAK 672
+DL+ + L +DP RIT EAL H +F+ P++
Sbjct: 305 LEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHTSRNPSR 355
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 166 bits (422), Expect = 5e-44
Identities = 80/325 (24%), Positives = 134/325 (41%), Gaps = 53/325 (16%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVV 431
G YG V +DK T A+K ++ L E+ L HPNI+ + +
Sbjct: 47 SGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD--F 104
Query: 432 GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRD 491
+ ++VM+ + L + + + + F + +++Q+L+ V +LH + I+HRD
Sbjct: 105 FEDKRNYYLVMECYKG--GELFDEIIHRMK-FNEVDAAVIIKQVLSGVTYLHKHNIVHRD 161
Query: 492 LKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTPI 548
LK NLLL + ++K+ DFGL+ + K + T +Y +PE+L Y
Sbjct: 162 LKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERLGTAYYIAPEVLRKK--YDEKC 218
Query: 549 DMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEY 608
D+WS+G I L P F G++D E L ++ K T + W S+ A
Sbjct: 219 DVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSE-GAK-------- 269
Query: 609 PNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE--------SPLP 660
DL+ + L +D RI+A +AL H + E LP
Sbjct: 270 --------------------DLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELP 309
Query: 661 IDPAMFP---TWPAKSELAHKKAAM 682
+ +L +AA+
Sbjct: 310 SLANAIENMRKFQNSQKL--AQAAL 332
Score = 32.4 bits (74), Expect = 0.78
Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
G YG V +DK T A K
Sbjct: 47 SGAYGEVLLCRDKVTHVERA-IKI 69
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 159 bits (405), Expect = 7e-44
Identities = 83/301 (27%), Positives = 127/301 (42%), Gaps = 56/301 (18%)
Query: 373 GTYGVVYRAKDKRTDEIVALKRLKMEK--EKEGFPITSLREINTLLKAQHPNIVTVREIV 430
G++G V A K T A K++ + + F +EI + HPNI+ + E
Sbjct: 20 GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRF----KQEIEIMKSLDHPNIIRLYETF 75
Query: 431 VGSNMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWI 487
+ I++VM+ E L E + K+ F + +M+ +L+AVA+ H +
Sbjct: 76 --EDNTDIYLVMELCTGGE-----LFERVVHKRV-FRESDAARIMKDVLSAVAYCHKLNV 127
Query: 488 LHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEY 544
HRDLK N L LK+ DFGLA + P K V T +Y SP++L G Y
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGKMMRTKVGTPYYVSPQVLEGL--Y 184
Query: 545 STPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMT 604
D WS G + LC P F+ +D E + +I + T EK W S
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSP-------- 236
Query: 605 FAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE----SPLP 660
+ + L+ + LT P RIT+ +AL H++F + SP
Sbjct: 237 ----------QAE-----------SLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRN 275
Query: 661 I 661
+
Sbjct: 276 L 276
Score = 29.1 bits (66), Expect = 7.0
Identities = 8/23 (34%), Positives = 10/23 (43%), Gaps = 1/23 (4%)
Query: 764 GTYGVVYRAKDKRTDEIVAPCKS 786
G++G V A K T A K
Sbjct: 20 GSWGEVKIAVQKGTRIRRA-AKK 41
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 165 bits (420), Expect = 9e-44
Identities = 82/326 (25%), Positives = 139/326 (42%), Gaps = 53/326 (16%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVV 431
+G++G V + KD+ T + A+K + K T LRE+ L K HPNI+ + E +
Sbjct: 32 KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE--I 89
Query: 432 GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRD 491
+ +IV + L + + +K+ F + +++Q+ + + ++H + I+HRD
Sbjct: 90 LEDSSSFYIVGELYTG--GELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 492 LKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTPI 548
LK N+LL + +K+ DFGL+ + + T +Y +PE+L G Y
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYIAPEVLRGT--YDEKC 203
Query: 549 DMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEY 608
D+WS G I L P F GK++ + L R+ + W S A
Sbjct: 204 DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD-DAK-------- 254
Query: 609 PNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE--------SPLP 660
DL+ K LT+ P RITA + L H + + S LP
Sbjct: 255 --------------------DLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLP 294
Query: 661 IDPAMFP---TWPAKSELAHKKAAMA 683
+ + A+ +L +AA+
Sbjct: 295 SLESAMTNIRQFQAEKKL--AQAALL 318
Score = 33.1 bits (76), Expect = 0.55
Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
+G++G V + KD+ T + A K
Sbjct: 32 KGSFGEVLKCKDRITQQEYA-VKV 54
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 162 bits (412), Expect = 9e-44
Identities = 95/404 (23%), Positives = 157/404 (38%), Gaps = 71/404 (17%)
Query: 266 SAESSAGSEESSQDGSEDSSQDSSSSDEEENDENEDKADKKEKKAKKRKKEDASPNESER 325
S+ G+E ++S S S E E AD E+ K K+ A +
Sbjct: 9 SSGVDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPA 68
Query: 326 DVSPHVIMDQDVDMEIELEKDTLPPYLPAIQGCRSVEEFKCLNRIEE---GTYGVVYRAK 382
+P D I K +V F +++ E G +G V++ +
Sbjct: 69 PPAP-------FDHRIVTAKQG------------AVNSFYTVSKTEILGGGRFGQVHKCE 109
Query: 383 DKRTDEIVALK--RLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVVGSNMDKIFI 440
+ T +A K + + K+KE EI+ + + H N++ + + + + I +
Sbjct: 110 ETATGLKLAAKIIKTRGMKDKEEV----KNEISVMNQLDHANLIQLYDAF--ESKNDIVL 163
Query: 441 VMDYV---EHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNL 497
VM+YV E L + + + + M+Q+ + H+H +ILH DLK N+
Sbjct: 164 VMEYVDGGE-----LFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENI 218
Query: 498 LLSHRG--ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGC 555
L +R +K+ DFGLAR Y P + T + +PE++ S P DMWSVG
Sbjct: 219 LCVNRDAKQIKIIDFGLARRYK-PREKLKVNFGTPEFLAPEVVNY-DFVSFPTDMWSVGV 276
Query: 556 IFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLK 615
I L F G +D E L+ I ++ + S
Sbjct: 277 IAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDIS-------------------- 316
Query: 616 TKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSESPL 659
E + + K L + RI+A EAL+H + S+ L
Sbjct: 317 ---------EEAKEFISKLLIKEKSWRISASEALKHPWLSDHKL 351
Score = 31.2 bits (71), Expect = 1.9
Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 751 SVEEFKCLNRIEE---GTYGVVYRAKDKRTDEIVAPCKS 786
+V F +++ E G +G V++ ++ T +A K
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLA-AKI 121
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 158 bits (403), Expect = 1e-43
Identities = 73/298 (24%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRL---KMEKEKEGFPITSLREINTLLKAQHPNIVTVRE 428
G +G V+ +++ + +K + + + E EI L HPNI+ + E
Sbjct: 32 SGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQI----EAEIEVLKSLDHPNIIKIFE 87
Query: 429 IVVGSNMDKIFIVMDYV---EHDMKSLMETMRSKKQV---FIPGEVKCLMQQLLNAVAHL 482
+ + ++IVM+ E L+E + S + G V LM+Q++NA+A+
Sbjct: 88 VF--EDYHNMYIVMETCEGGE-----LLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 483 HDNWILHRDLKTSNLLLSHR---GILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLL 539
H ++H+DLK N+L +K+ DFGLA + +H T T Y +PE+
Sbjct: 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK-SDEHSTNAAGTALYMAPEVFK 199
Query: 540 GCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPA 599
+ + D+WS G + L FTG S E + +K
Sbjct: 200 R--DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE----VQ-------QKATYK------ 240
Query: 600 VQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSES 657
+ +A LT DLL + LT DP R +A + L H++F ++
Sbjct: 241 --EPNYAVEC-----------RPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
Score = 30.7 bits (70), Expect = 2.2
Identities = 4/24 (16%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
G +G V+ +++ + K+
Sbjct: 32 SGAFGDVHLVEERSSGLERV-IKT 54
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 164 bits (417), Expect = 2e-43
Identities = 83/325 (25%), Positives = 140/325 (43%), Gaps = 53/325 (16%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSL-REINTLLKAQHPNIVTVREIV 430
+G++G V KDK T + A+K + + K+ SL RE+ L + HPNI+ + E
Sbjct: 36 KGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE-- 93
Query: 431 VGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHR 490
+ ++V + L + + S+K+ F + +++Q+L+ + ++H N I+HR
Sbjct: 94 FFEDKGYFYLVGEVYTG--GELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNKIVHR 150
Query: 491 DLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTP 547
DLK NLLL + +++ DFGL+ + K + T +Y +PE+L G Y
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVLHGT--YDEK 207
Query: 548 IDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAE 607
D+WS G I L P F G ++ + L ++ K T W S+ A
Sbjct: 208 CDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE-SAK------- 259
Query: 608 YPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFS-------ESPLP 660
DL+ K LTY P RI+A +AL H++ +P
Sbjct: 260 ---------------------DLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVP 298
Query: 661 IDPAMFP---TWPAKSELAHKKAAM 682
+ +L +AA+
Sbjct: 299 SLDNAILNIRQFQGTQKL--AQAAL 321
Score = 32.7 bits (75), Expect = 0.62
Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
+G++G V KDK T + A K
Sbjct: 36 KGSFGEVILCKDKITGQECA-VKV 58
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 158 bits (402), Expect = 2e-43
Identities = 77/286 (26%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVV 431
+G++G V + KD+ T + A+K + K T LRE+ L K HPNI+ + EI+
Sbjct: 32 KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL- 90
Query: 432 GSNMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWIL 488
+ +IV + E L + + +K+ F + +++Q+ + + ++H + I+
Sbjct: 91 -EDSSSFYIVGELYTGGE-----LFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNIV 143
Query: 489 HRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEYS 545
HRDLK N+LL + +K+ DFGL+ + + T +Y +PE+L Y
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLR--GTYD 200
Query: 546 TPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTF 605
D+WS G I L P F GK++ + L R+ + W S A K
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD-DA--K--- 254
Query: 606 AEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
DL+ K LT+ P RITA + L H
Sbjct: 255 -----------------------DLIRKMLTFHPSLRITATQCLEH 277
Score = 32.6 bits (75), Expect = 0.61
Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
+G++G V + KD+ T + A K
Sbjct: 32 KGSFGEVLKCKDRITQQEYA-VKV 54
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 164 bits (417), Expect = 2e-43
Identities = 78/335 (23%), Positives = 135/335 (40%), Gaps = 63/335 (18%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITS-----------LREINTLLKAQH 420
G YG V K+K A+K +K + +G EI+ L H
Sbjct: 46 SGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDH 105
Query: 421 PNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVA 480
PNI+ + + V + ++V ++ E L E + ++ + F + +M+Q+L+ +
Sbjct: 106 PNIIKLFD--VFEDKKYFYLVTEFYEG--GELFEQIINRHK-FDECDAANIMKQILSGIC 160
Query: 481 HLHDNWILHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPEL 537
+LH + I+HRD+K N+LL ++ +K+ DFGL+ + S + T +Y +PE+
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-SKDYKLRDRLGTAYYIAPEV 219
Query: 538 LLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKL 597
L Y+ D+WS G I LC P F G++D + + ++ K + W S
Sbjct: 220 LKKK--YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISD- 276
Query: 598 PAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE- 656
A +L+ LTYD R TA+EAL + +
Sbjct: 277 EAK----------------------------ELIKLMLTYDYNKRCTAEEALNSRWIKKY 308
Query: 657 ------SPLPIDPAMFP---TWPAKSELAHKKAAM 682
S + +L +AA+
Sbjct: 309 ANNINKSDQKTLCGALSNMRKFEGSQKL--AQAAI 341
Score = 32.8 bits (75), Expect = 0.60
Identities = 8/24 (33%), Positives = 9/24 (37%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
G YG V K+K A K
Sbjct: 46 SGAYGEVLLCKEKNGHSEKA-IKV 68
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 157 bits (400), Expect = 4e-43
Identities = 74/298 (24%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEK-EKEGFPITSLREINTLLKA 418
++E+F+ + +G +G VY A++K++ I+ALK L + EK G RE+
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 419 QHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
+HPNI+ + + +++++++Y ++ ++ K F + +L NA
Sbjct: 67 RHPNILRLYGYFHDAT--RVYLILEYAPL--GTVYRELQ-KLSKFDEQRTATYITELANA 121
Query: 479 VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELL 538
+++ H ++HRD+K NLLL G LK+ DFG + S + + TL Y PE++
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTD-LCGTLDYLPPEMI 179
Query: 539 LGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLP 598
G + + +D+WS+G + EFL +P F + E RI +
Sbjct: 180 EG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------- 222
Query: 599 AVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE 656
+ TF ++ +TE DL+ + L ++P R E L H + +
Sbjct: 223 ---EFTFPDF--------------VTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
Score = 32.2 bits (74), Expect = 0.80
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 751 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
++E+F+ + +G +G VY A++K++ I+A
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILA 38
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 159 bits (403), Expect = 5e-43
Identities = 72/332 (21%), Positives = 117/332 (35%), Gaps = 78/332 (23%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITS---LREINTLLKAQHPNIVTVRE 428
+G+YGVV A + +T I A+K + K ++ P E+ + K HPNI + E
Sbjct: 36 QGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYE 95
Query: 429 IVVGSNMDKIFIVMDYVE-------------------------------------HDMKS 451
V + I +VM+ S
Sbjct: 96 --VYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 452 LMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRG--ILKVGD 509
+ S V + +M+Q+ +A+ +LH+ I HRD+K N L S +K+ D
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVD 213
Query: 510 FGLAREYGSP----LKHYTPIVVTLWYRSPELLLGC-KEYSTPIDMWSVGCIFAEFLCME 564
FGL++E+ T T ++ +PE+L + Y D WS G + L
Sbjct: 214 FGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGA 273
Query: 565 PLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILT 624
F G +D + +S++ + S
Sbjct: 274 VPFPGVNDADTISQVLNKKLCFENPNYNVLS----------------------------- 304
Query: 625 ELGYDLLCKFLTYDPVTRITADEALRHDYFSE 656
L DLL L + R A AL+H + S+
Sbjct: 305 PLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336
Score = 32.5 bits (74), Expect = 0.64
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
+G+YGVV A + +T I A K
Sbjct: 36 QGSYGVVRVAIENQTRAIRA-IKI 58
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 159 bits (404), Expect = 7e-43
Identities = 79/341 (23%), Positives = 134/341 (39%), Gaps = 75/341 (21%)
Query: 370 IEEGTYGVVYRAKDKRTDEIVALKRLKMEK--EKEGFPITSL-REINTLLKAQHPNIVTV 426
I +G + VV R ++ T + A+K + + K G L RE + +HP+IV +
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 427 REIVVGSNMDKIFIVMDYVE------------HDMKSLMETMRSKKQVFIPGEVKCLMQQ 474
E S+ +++V ++++ E M+Q
Sbjct: 92 LETY--SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA-----------VASHYMRQ 138
Query: 475 LLNAVAHLHDNWILHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLW 531
+L A+ + HDN I+HRD+K +LL+ + +K+G FG+A + G V T
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 198
Query: 532 YRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIW 591
+ +PE++ + Y P+D+W G I L F G + R+F E I
Sbjct: 199 FMAPEVVKR-EPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLF-------EGII 245
Query: 592 PGFSKLPAVQKMTF--AEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEAL 649
G K ++ ++ +E DL+ + L DP RIT EAL
Sbjct: 246 KG--------KYKMNPRQWSHI------------SESAKDLVRRMLMLDPAERITVYEAL 285
Query: 650 RH----DYFSESPLPIDPAMFP---TWPAKSELAHKKAAMA 683
H + + P + A+ +L K A +A
Sbjct: 286 NHPWLKERDRYAYKIHLPETVEQLRKFNARRKL--KGAVLA 324
Score = 31.9 bits (73), Expect = 1.2
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 761 IEEGTYGVVYRAKDKRTDEIVAPCKS 786
I +G + VV R ++ T + A K
Sbjct: 32 IGKGPFSVVRRCINRETGQQFA-VKI 56
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 157 bits (398), Expect = 8e-43
Identities = 58/315 (18%), Positives = 106/315 (33%), Gaps = 64/315 (20%)
Query: 359 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLK- 417
R EF L +I G +G V++ + I A+KR K +LRE+
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 418 AQHPNIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQQLL 476
QH ++V D + I +Y + + F E+K L+ Q+
Sbjct: 68 GQHSHVVRYFSAWAED--DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125
Query: 477 NAVAHLHDNWILHRDLKTSNLLLSHRGIL-------------------KVGDFGLAREYG 517
+ ++H ++H D+K SN+ +S I K+GD G
Sbjct: 126 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 185
Query: 518 SPLKHYTPIVV-TLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQL 576
SP + + + E+L + D++++ EPL + +Q
Sbjct: 186 SP-----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLP---RNGDQW 237
Query: 577 SRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLT 636
I + ++P +L++ +LL +
Sbjct: 238 HEIRQGR----------LPRIP----------------------QVLSQEFTELLKVMIH 265
Query: 637 YDPVTRITADEALRH 651
DP R +A ++H
Sbjct: 266 PDPERRPSAMALVKH 280
Score = 35.8 bits (83), Expect = 0.062
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 750 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
R EF L +I G +G V++ + I A
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYA 40
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 157 bits (399), Expect = 2e-42
Identities = 58/318 (18%), Positives = 125/318 (39%), Gaps = 51/318 (16%)
Query: 373 GTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVVG 432
G +G+V+R + + + K +K++ + +EI+ L A+H NI+ + E
Sbjct: 16 GEFGIVHRCVETSSKKTYMAKFVKVKGTDQV---LVKKEISILNIARHRNILHLHESF-- 70
Query: 433 SNMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILH 489
+M+++ ++ +++ + + E + + E+ + Q+ A+ LH + I H
Sbjct: 71 ESMEELVMIFEFISGLD-----IFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGH 125
Query: 490 RDLKTSNLLLSHR--GILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTP 547
D++ N++ R +K+ +FG AR+ P ++ + Y +PE+ ST
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQL-KPGDNFRLLFTAPEYYAPEVHQH-DVVSTA 183
Query: 548 IDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPN--EKIWPGFSKLPAVQKMTF 605
DMWS+G + L F +++ + + I E+ + S
Sbjct: 184 TDMWSLGTLVYVLLSGINPFLAETNQQIIENIMN--AEYTFDEEAFKEIS---------- 231
Query: 606 AEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSESPLPIDPAM 665
D + + L + +R+TA EAL+H + + + +
Sbjct: 232 -------------------IEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKV 272
Query: 666 FPTWPAKSEL-AHKKAAM 682
T + K +
Sbjct: 273 IRTLKHRRYYHTLIKKDL 290
Score = 29.9 bits (68), Expect = 4.3
Identities = 5/23 (21%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 764 GTYGVVYRAKDKRTDEIVAPCKS 786
G +G+V+R + + + K
Sbjct: 16 GEFGIVHRCVETSSKKTYM-AKF 37
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 154 bits (392), Expect = 7e-42
Identities = 77/291 (26%), Positives = 119/291 (40%), Gaps = 58/291 (19%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVV 431
G + V+ K + T ++ ALK +K K + EI L K +H NIVT+ +I
Sbjct: 19 SGAFSEVFLVKQRLTGKLFALKCIK--KSPAFRDSSLENEIAVLKKIKHENIVTLEDIY- 75
Query: 432 GSNMDKIFIVMDYVE--------HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLH 483
+ ++VM V + E S ++QQ+L+AV +LH
Sbjct: 76 -ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-----------VIQQVLSAVKYLH 123
Query: 484 DNWILHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLG 540
+N I+HRDLK NLL + + DFGL++ + + + T Y +PE+L
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI--MSTACGTPGYVAPEVLAQ 181
Query: 541 CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAV 600
K YS +D WS+G I LC P F +++ + +I + W S+ A
Sbjct: 182 -KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISE-SA- 238
Query: 601 QKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
K D +C L DP R T ++AL H
Sbjct: 239 -K--------------------------DFICHLLEKDPNERYTCEKALSH 262
Score = 32.9 bits (76), Expect = 0.49
Identities = 6/24 (25%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
G + V+ K + T ++ A K
Sbjct: 19 SGAFSEVFLVKQRLTGKLFA-LKC 41
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 158 bits (400), Expect = 9e-42
Identities = 57/295 (19%), Positives = 105/295 (35%), Gaps = 53/295 (17%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLK-AQHPNIVTVREIV 430
G G + + + VA+KR+ E + RE+ L + +HPN++
Sbjct: 34 HGAEGTIVY-RGMFDNRDVAVKRILPECFS-----FADREVQLLRESDEHPNVIRYFCTE 87
Query: 431 VGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHR 490
+ +I ++ +L E + K + E L+QQ + +AHLH I+HR
Sbjct: 88 --KDRQFQYIAIELCA---ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHR 142
Query: 491 DLKTSNLLLSHRG-----ILKVGDFGLAREYG---SPLKHYTPIVVTLWYRSPELLLGC- 541
DLK N+L+S + DFGL ++ + + T + +PE+L
Sbjct: 143 DLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDC 202
Query: 542 -KEYSTPIDMWSVGCIFAEFLCM-EPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPA 599
+ + +D++S GC+F + F + +
Sbjct: 203 KENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILL-GACSLDCLHPEKHED---- 257
Query: 600 VQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYF 654
+ +L+ K + DP R +A L+H +F
Sbjct: 258 -------------------------VIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 153 bits (389), Expect = 1e-41
Identities = 77/295 (26%), Positives = 117/295 (39%), Gaps = 63/295 (21%)
Query: 372 EGTYGVVYRAKDKRTDEIVALK----RLKMEKEKEGFPITSLREINTLLKAQHPNIVTVR 427
+G + VV R K T A K + ++ + RE K QHPNIV +
Sbjct: 16 KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKL----EREARICRKLQHPNIVRLH 71
Query: 428 EIVVGSNMDKIFIVMDYVE--------HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
+ + ++V D V + E + +QQ+L ++
Sbjct: 72 DSI--QEESFHYLVFDLVTGGELFEDIVAREFYSEA-----------DASHCIQQILESI 118
Query: 480 AHLHDNWILHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPE 536
A+ H N I+HR+LK NLLL+ + +K+ DFGLA E + + T Y SPE
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPE 177
Query: 537 LLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSK 596
+L YS P+D+W+ G I L P F + R++ +I G
Sbjct: 178 VLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQ----HRLY-------AQIKAGAYD 225
Query: 597 LPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
P+ E+ V T L+ LT +P RITAD+AL+
Sbjct: 226 YPS------PEWDTV------------TPEAKSLIDSMLTVNPKKRITADQALKV 262
Score = 31.0 bits (71), Expect = 1.7
Identities = 8/24 (33%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
+G + VV R K T A K
Sbjct: 16 KGAFSVVRRCVHKTTGLEFA-AKI 38
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 153 bits (388), Expect = 1e-41
Identities = 79/314 (25%), Positives = 141/314 (44%), Gaps = 42/314 (13%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRL-KMEKEKEGFPITSLREINTLLKA 418
++++F + +G +G VY A++K+ I+ALK L K + EKEG REI
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 419 QHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
+HPNI+ + + +I++++++ L + ++ K F M++L +A
Sbjct: 72 RHPNILRMYN--YFHDRKRIYLMLEFAPR--GELYKELQ-KHGRFDEQRSATFMEELADA 126
Query: 479 VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELL 538
+ + H+ ++HRD+K NLL+ ++G LK+ DFG + S L+ T + TL Y PE++
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-LRRRT-MCGTLDYLPPEMI 184
Query: 539 LGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLP 598
G K + +D+W G + EFL P F S E RI
Sbjct: 185 EG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV---------------- 227
Query: 599 AVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSESP 658
+ F + L++ DL+ K L Y P R+ + H + +
Sbjct: 228 ---DLKFPPF--------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270
Query: 659 LPIDPAMFPTWPAK 672
+ P ++ + +K
Sbjct: 271 RRVLPPVYQSTQSK 284
Score = 31.4 bits (72), Expect = 1.2
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 751 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
++++F + +G +G VY A++K+ I+A
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMA 43
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 160 bits (406), Expect = 2e-41
Identities = 77/372 (20%), Positives = 137/372 (36%), Gaps = 53/372 (14%)
Query: 288 SSSSDEEENDENEDKADKKEKKAKKRKKEDASPNESERDVSPHVIMDQDVDMEIELEKDT 347
+ + + E + K+R+ D V + D D
Sbjct: 85 ENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYD-----NYVFDI 139
Query: 348 LPPYLPAIQGCRSV---EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGF 404
Y P + + + + G +GVV+R ++ T A K + E +
Sbjct: 140 WKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE 199
Query: 405 PITSLREINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYV---EHDMKSLMETMRSKKQ 461
+ +EI T+ +HP +V + + + +++ ++ +++ E L E + +
Sbjct: 200 TV--RKEIQTMSVLRHPTLVNLHDAF--EDDNEMVMIYEFMSGGE-----LFEKVADEHN 250
Query: 462 VFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRG--ILKVGDFGLAREYGSP 519
E M+Q+ + H+H+N +H DLK N++ + + LK+ DFGL P
Sbjct: 251 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DP 309
Query: 520 LKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRI 579
+ T + +PE+ G K DMWSVG + L F G++D E L +
Sbjct: 310 KQSVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 368
Query: 580 FKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDP 639
++ + G S E G D + K L DP
Sbjct: 369 KSCDWNMDDSAFSGIS-----------------------------EDGKDFIRKLLLADP 399
Query: 640 VTRITADEALRH 651
TR+T +AL H
Sbjct: 400 NTRMTIHQALEH 411
Score = 29.8 bits (67), Expect = 5.0
Identities = 8/23 (34%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Query: 764 GTYGVVYRAKDKRTDEIVAPCKS 786
G +GVV+R ++ T A K
Sbjct: 168 GAFGVVHRVTERATGNNFA-AKF 189
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 155 bits (393), Expect = 2e-41
Identities = 44/324 (13%), Positives = 91/324 (28%), Gaps = 80/324 (24%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLRE-------------------- 411
+ A D+ T E + + I ++E
Sbjct: 83 QEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVH 142
Query: 412 ------INTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQV--- 462
+ + Q ++ VR + F + ++ ++++ E + S
Sbjct: 143 LRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKS 202
Query: 463 FIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKH 522
+ L Q++ +A LH ++H L+ +++L RG + + F G
Sbjct: 203 LVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG----A 258
Query: 523 YTPIVVTLWYRSPELL----------LGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSD 572
V+ + PEL + D W++G + C + T +
Sbjct: 259 RVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAA 318
Query: 573 LEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLC 632
L IF++ V+ LL
Sbjct: 319 LGGSEWIFRS--------CKNIP--QPVR---------------------------ALLE 341
Query: 633 KFLTYDPVTRITADEALRHDYFSE 656
FL Y R+ +A+ + +
Sbjct: 342 GFLRYPKEDRLLPLQAMETPEYEQ 365
Score = 33.1 bits (75), Expect = 0.53
Identities = 4/20 (20%), Positives = 6/20 (30%)
Query: 763 EGTYGVVYRAKDKRTDEIVA 782
+ A D+ T E
Sbjct: 83 QEDPYAYLEATDQETGESFE 102
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 154 bits (390), Expect = 4e-41
Identities = 61/329 (18%), Positives = 136/329 (41%), Gaps = 59/329 (17%)
Query: 359 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLK---MEKEKEGFPITSL------ 409
+ + +++ + + +G + + + ++ ALK+ + +EK+++ +
Sbjct: 28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKS 85
Query: 410 ------REINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVE-----HDMKSLMETMRS 458
E+ + ++ +T I+ +N D+++I+ +Y+E + ++
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEGII--TNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 459 KKQVFIPGEVKCLMQQLLNAVAHLHD-NWILHRDLKTSNLLLSHRGILKVGDFGLAREY- 516
+KC+++ +LN+ +++H+ I HRD+K SN+L+ G +K+ DFG +
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV 203
Query: 517 --------GSPLKHYTPIVVTLWYRSPELLLGCKEYSTP-IDMWSVGCIFAEFLCMEPLF 567
G+ + P PE Y+ +D+WS+G F
Sbjct: 204 DKKIKGSRGTY--EFMP---------PEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
Query: 568 TGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELG 627
+ K L +L I + P + N K+ + + L+
Sbjct: 253 SLKISLVELFN----------NIRTKNIEYPLDRNHFLYPLTN---KKSTCSNNFLSNED 299
Query: 628 YDLLCKFLTYDPVTRITADEALRHDYFSE 656
D L FL +P RIT+++AL+H++ ++
Sbjct: 300 IDFLKLFLRKNPAERITSEDALKHEWLAD 328
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 152 bits (386), Expect = 4e-41
Identities = 78/329 (23%), Positives = 123/329 (37%), Gaps = 68/329 (20%)
Query: 353 PAIQGCRSVEEFKCLNRIEE----GTYGVVYRAKDKRTDEIVALKRLKMEKEK------- 401
A+ G S F +E G VV R K T + A+K + +
Sbjct: 4 AALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV 63
Query: 402 EGFPITSLREINTLLK-AQHPNIVTVREIVVGSNMDKIFIVMDYVE--------HDMKSL 452
+ +L+E++ L K + HPNI+ +++ F+V D ++ + +L
Sbjct: 64 QELREATLKEVDILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 453 METMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGL 512
E E + +M+ LL + LH I+HRDLK N+LL +K+ DFG
Sbjct: 122 SEK-----------ETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 513 AREYGSPLKHYTPIVVTLWYRSPELLLGC-----KEYSTPIDMWSVGCIFAEFLCMEPLF 567
+ + P + + T Y +PE++ Y +DMWS G I L P F
Sbjct: 171 SCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
Query: 568 TGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELG 627
+ + L I W +S K
Sbjct: 230 WHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV---K------------------------- 261
Query: 628 YDLLCKFLTYDPVTRITADEALRHDYFSE 656
DL+ +FL P R TA+EAL H +F +
Sbjct: 262 -DLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
Score = 30.7 bits (70), Expect = 2.1
Identities = 13/47 (27%), Positives = 16/47 (34%), Gaps = 5/47 (10%)
Query: 744 PAIQGCRSVEEFKCLNRIEE----GTYGVVYRAKDKRTDEIVAPCKS 786
A+ G S F +E G VV R K T + A K
Sbjct: 4 AALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYA-VKI 49
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 151 bits (383), Expect = 7e-41
Identities = 68/295 (23%), Positives = 122/295 (41%), Gaps = 60/295 (20%)
Query: 373 GTYGVVYRAKDKRTDEIVALKRL---KMEKEKEGFPITSL-REINTLLKAQHPNIVTVRE 428
G + +V + + K T + A K + ++ + G + RE+N L + +HPNI+T+ +
Sbjct: 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHD 75
Query: 429 IVVGSNMDKIFIVMDYVE--------HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVA 480
I N + ++++ V + +SL E E ++Q+L+ V
Sbjct: 76 IF--ENKTDVVLILELVSGGELFDFLAEKESLTED-----------EATQFLKQILDGVH 122
Query: 481 HLHDNWILHRDLKTSNLLLSHRGI----LKVGDFGLAREYGSPLKHYTPIVVTLWYRSPE 536
+LH I H DLK N++L + + +K+ DFG+A + + I T + +PE
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE-AGNEFKNIFGTPEFVAPE 181
Query: 537 LLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSK 596
++ + DMWS+G I L F G++ E L+ I +E+ + S
Sbjct: 182 IVNY-EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS- 239
Query: 597 LPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
EL D + + L DP R+T ++L H
Sbjct: 240 ----------------------------ELAKDFIRRLLVKDPKRRMTIAQSLEH 266
Score = 30.6 bits (70), Expect = 2.2
Identities = 6/23 (26%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 764 GTYGVVYRAKDKRTDEIVAPCKS 786
G + +V + + K T + A K
Sbjct: 16 GQFAIVRKCRQKGTGKEYA-AKF 37
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 154 bits (392), Expect = 1e-40
Identities = 68/317 (21%), Positives = 118/317 (37%), Gaps = 76/317 (23%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLK-AQHPNIVTVREIV 430
G+ G V + VA+KR+ ++ +L EI L + HPN++
Sbjct: 25 YGSSGTVV-FQGSFQGRPVAVKRMLIDFCD-----IALMEIKLLTESDDHPNVIRYYCSE 78
Query: 431 VGSNMDKIFIVMDYVEHDMKSLMETMRSKK------QVFIPGEVKCLMQQLLNAVAHLHD 484
+ ++I ++ +L + + SK ++ L++Q+ + VAHLH
Sbjct: 79 --TTDRFLYIALELCN---LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 485 NWILHRDLKTSNLLLSHRGI-------------LKVGDFGLAREYG----SPLKHYTPIV 527
I+HRDLK N+L+S + + DFGL ++ S +
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS 193
Query: 528 VTLWYRSPELLLGC------KEYSTPIDMWSVGCIFAEFLCM-EPLFTGKSDLEQLSRIF 580
T +R+PELL + + ID++S+GC+F L + F K E S I
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNII 251
Query: 581 K---TMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTY 637
+ ++ DL+ + + +
Sbjct: 252 RGIFSLDEMKCLHDRSLI-----------------------------AEATDLISQMIDH 282
Query: 638 DPVTRITADEALRHDYF 654
DP+ R TA + LRH F
Sbjct: 283 DPLKRPTAMKVLRHPLF 299
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 152 bits (385), Expect = 1e-40
Identities = 72/348 (20%), Positives = 121/348 (34%), Gaps = 64/348 (18%)
Query: 364 FKCLNRIEEGTYGVVYRAKDKRTDEIVALKR-LKMEKEKEGFPITSLREINTLLK-AQHP 421
+ + EG + VY A+D + ALKR L E+EK ++E+ + K + HP
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNR---AIIQEVCFMKKLSGHP 86
Query: 422 NIVT------VREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQL 475
NIV + + + + ++ + + + ++ M S+ V + Q
Sbjct: 87 NIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP-LSCDTVLKIFYQT 145
Query: 476 LNAVAHLHDN--WILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVV----- 528
AV H+H I+HRDLK NLLLS++G +K+ DFG A +
Sbjct: 146 CRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVE 205
Query: 529 -------TLWYRSPEL--LLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRI 579
T YR+PE+ L D+W++GCI + F + L RI
Sbjct: 206 EEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL----RI 261
Query: 580 FKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDP 639
G + L+ L +P
Sbjct: 262 VN--GKYSIPPHDTQYT----------------VFH-------------SLIRAMLQVNP 290
Query: 640 VTRITADEALRHDYFSESPLPIDPAMFPTWPAKSELAHKKAAMASPKP 687
R++ E + + ++P P + +A S P
Sbjct: 291 EERLSIAEVVHQLQEIAAARNVNP-KSPITELLEQNGGYGSATLSRGP 337
Score = 30.5 bits (69), Expect = 2.6
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 755 FKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ + EG + VY A+D + A
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYA 57
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 151 bits (384), Expect = 1e-40
Identities = 77/306 (25%), Positives = 127/306 (41%), Gaps = 52/306 (16%)
Query: 372 EGTYGVVYRAKDKRTDEIVALK-----RLKMEKEKEGFPITSL-REINTLLKAQHPNIVT 425
G G V A +++T + VA+K + + +E P ++ EI L K HP I+
Sbjct: 20 SGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK 79
Query: 426 VREIVVGSNMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHL 482
++ + + +IV++ + E L + + K+ K Q+L AV +L
Sbjct: 80 IKNFF---DAEDYYIVLELMEGGE-----LFDKVVGNKR-LKEATCKLYFYQMLLAVQYL 130
Query: 483 HDNWILHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLL 539
H+N I+HRDLK N+LLS + ++K+ DFG ++ G + T Y +PE+L+
Sbjct: 131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLV 189
Query: 540 GC--KEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKL 597
Y+ +D WS+G I L P F+ L ++I G
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK----------DQITSGKYNF 239
Query: 598 PAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSES 657
+ V +E DL+ K L DP R T +EALRH + +
Sbjct: 240 IP------EVWAEV------------SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281
Query: 658 PLPIDP 663
+
Sbjct: 282 DMKRKF 287
Score = 32.6 bits (75), Expect = 0.67
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKSGNGKFWLENFPSRIRTYHLQVESELN 812
G G V A +++T + VA K + K +R L VE+E+
Sbjct: 20 SGACGEVKLAFERKTCKKVA-IKIIS-KRKFAIGSAREADPALNVETEIE 67
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 151 bits (384), Expect = 1e-40
Identities = 69/302 (22%), Positives = 118/302 (39%), Gaps = 60/302 (19%)
Query: 373 GTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITS----LREINTLLKAQHPNIVTVRE 428
G + +V + ++K T A K +K + + S RE++ L + H N++T+ +
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 429 IVVGSNMDKIFIVMDYVE--------HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVA 480
+ N + ++++ V +SL E E ++Q+L+ V
Sbjct: 83 VY--ENRTDVVLILELVSGGELFDFLAQKESLSEE-----------EATSFIKQILDGVN 129
Query: 481 HLHDNWILHRDLKTSNLLLSHR----GILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPE 536
+LH I H DLK N++L + +K+ DFGLA E + I T + +PE
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPE 188
Query: 537 LLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSK 596
++ + DMWS+G I L F G + E L+ I +E+ + S
Sbjct: 189 IVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS- 246
Query: 597 LPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE 656
EL D + K L + R+T EALRH + +
Sbjct: 247 ----------------------------ELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 657 SP 658
Sbjct: 279 VD 280
Score = 29.9 bits (68), Expect = 4.2
Identities = 6/23 (26%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 764 GTYGVVYRAKDKRTDEIVAPCKS 786
G + +V + ++K T A K
Sbjct: 23 GQFAIVKKCREKSTGLEYA-AKF 44
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 153 bits (388), Expect = 2e-40
Identities = 61/327 (18%), Positives = 126/327 (38%), Gaps = 50/327 (15%)
Query: 334 DQDVDMEIELEKDTLPPYLPAIQGCRSVEEFKCLNRIEE----GTYGVVYRAKDKRTDEI 389
++ + +D Y+P + I E G +GVV+R +K T +
Sbjct: 20 GPKINDYDKFYEDIWKKYVPQPVEVKQ-GSVYDYYDILEELGSGAFGVVHRCVEKATGRV 78
Query: 390 VALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYV---E 446
K + + + + EI+ + + HP ++ + + + ++ ++++++ E
Sbjct: 79 FVAKFINTPYPLDKYTV--KNEISIMNQLHHPKLINLHDAF--EDKYEMVLILEFLSGGE 134
Query: 447 HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRG--I 504
L + + ++ EV M+Q + H+H++ I+H D+K N++ +
Sbjct: 135 -----LFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASS 189
Query: 505 LKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCME 564
+K+ DFGLA + P + T + +PE++ + DMW++G + L
Sbjct: 190 VKIIDFGLATKLN-PDEIVKVTTATAEFAAPEIVDR-EPVGFYTDMWAIGVLGYVLLSGL 247
Query: 565 PLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILT 624
F G+ DLE L + + +E + S
Sbjct: 248 SPFAGEDDLETLQNVKRCDWEFDEDAFSSVS----------------------------- 278
Query: 625 ELGYDLLCKFLTYDPVTRITADEALRH 651
D + L +P R+T +AL H
Sbjct: 279 PEAKDFIKNLLQKEPRKRLTVHDALEH 305
Score = 30.1 bits (68), Expect = 4.2
Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 725 DQDVDMEIELEKDTLPPYLPAIQGCRSVEEFKCLNRIEE----GTYGVVYRAKDKRTDEI 780
++ + +D Y+P + I E G +GVV+R +K T +
Sbjct: 20 GPKINDYDKFYEDIWKKYVPQPVEVKQ-GSVYDYYDILEELGSGAFGVVHRCVEKATGRV 78
Query: 781 VAPCKS 786
K
Sbjct: 79 FV-AKF 83
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 150 bits (381), Expect = 2e-40
Identities = 72/314 (22%), Positives = 126/314 (40%), Gaps = 68/314 (21%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEK--EKEGFPITSLREINTLLKAQHPNIVTVREI 429
EG+YG V D T A+K LK +K +EI L + +H N++ + ++
Sbjct: 15 EGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDV 74
Query: 430 VVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILH 489
+ K+++VM+Y M+ +++++ K+ F + QL++ + +LH I+H
Sbjct: 75 LYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR--FPVCQAHGYFCQLIDGLEYLHSQGIVH 132
Query: 490 RDLKTSNLLLSHRGILKVGDFGLAREY-------------GSPLKHYTPIVVTLWYRSPE 536
+D+K NLLL+ G LK+ G+A GSP + P PE
Sbjct: 133 KDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP--AFQP---------PE 181
Query: 537 LLLGCKEYSTP-IDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFS 595
+ G +S +D+WS G F + + + ++F+ I G
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPF----EGDNIYKLFE-------NIGKGSY 230
Query: 596 KLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYF- 654
+P DLL L Y+P R + + +H +F
Sbjct: 231 AIP----------------------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFR 268
Query: 655 -----SESPLPIDP 663
+E+P+PI P
Sbjct: 269 KKHPPAEAPVPIPP 282
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 154 bits (390), Expect = 2e-40
Identities = 76/303 (25%), Positives = 127/303 (41%), Gaps = 52/303 (17%)
Query: 372 EGTYGVVYRAKDKRTDEIVALK-----RLKMEKEKEGFPITSL-REINTLLKAQHPNIVT 425
G G V A +++T + VA++ + + +E P ++ EI L K HP I+
Sbjct: 145 SGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK 204
Query: 426 VREIVVGSNMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHL 482
++ + + +IV++ + E L + + K+ K Q+L AV +L
Sbjct: 205 IKNFF---DAEDYYIVLELMEGGE-----LFDKVVGNKR-LKEATCKLYFYQMLLAVQYL 255
Query: 483 HDNWILHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLL 539
H+N I+HRDLK N+LLS + ++K+ DFG ++ G + T Y +PE+L+
Sbjct: 256 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLV 314
Query: 540 G--CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKL 597
Y+ +D WS+G I L P F+ L ++I G
Sbjct: 315 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK----------DQITSGKYNF 364
Query: 598 PAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSES 657
+ V +E DL+ K L DP R T +EALRH + +
Sbjct: 365 IP------EVWAEV------------SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406
Query: 658 PLP 660
+
Sbjct: 407 DMK 409
Score = 30.8 bits (70), Expect = 2.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKSGNGKFWLENFPSRIRTYHLQVESE------LNH 813
G G V A +++T + VA + + K +R L VE+E LNH
Sbjct: 145 SGACGEVKLAFERKTCKKVA-IRIIS-KRKFAIGSAREADPALNVETEIEILKKLNH 199
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 150 bits (381), Expect = 4e-40
Identities = 82/317 (25%), Positives = 131/317 (41%), Gaps = 44/317 (13%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQ-HPNIVTVREIV 430
EG++ + + K++++ A+K + E +EI L + HPNIV + E
Sbjct: 21 EGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ-----KEITALKLCEGHPNIVKLHE-- 73
Query: 431 VGSNMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWI 487
V + F+VM+ + E L E ++ KK F E +M++L++AV+H+HD +
Sbjct: 74 VFHDQLHTFLVMELLNGGE-----LFERIKKKKH-FSETEASYIMRKLVSAVSHMHDVGV 127
Query: 488 LHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEY 544
+HRDLK NLL + +K+ DFG AR + TL Y +PELL Y
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQ-NGY 186
Query: 545 STPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMT 604
D+WS+G I L + F + + M +KI G
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM----KKIKKGDFSFEG----- 237
Query: 605 FAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE-SPLPIDP 663
+ NV ++ DL+ LT DP R+ +++ + S L +P
Sbjct: 238 -EAWKNV------------SQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNP 284
Query: 664 AMFPTWPAKSELAHKKA 680
M P S A
Sbjct: 285 LMTPDILGSSGAAVHTC 301
Score = 30.3 bits (69), Expect = 2.9
Identities = 5/24 (20%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
EG++ + + K++++ A K
Sbjct: 21 EGSFSICRKCVHKKSNQAFA-VKI 43
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 150 bits (381), Expect = 4e-40
Identities = 68/296 (22%), Positives = 119/296 (40%), Gaps = 60/296 (20%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRL---KMEKEKEGFPITSL-REINTLLKAQHPNIVTVR 427
G + VV + ++K T A K + + + + G + RE++ L + QHPN++T+
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80
Query: 428 EIVVGSNMDKIFIVMDYVE--------HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
E+ N + ++++ V + +SL E E ++Q+LN V
Sbjct: 81 EVY--ENKTDVILILELVAGGELFDFLAEKESLTEE-----------EATEFLKQILNGV 127
Query: 480 AHLHDNWILHRDLKTSNLLLSHR----GILKVGDFGLAREYGSPLKHYTPIVVTLWYRSP 535
+LH I H DLK N++L R +K+ DFGLA + + I T + +P
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNEFKNIFGTPEFVAP 186
Query: 536 ELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFS 595
E++ + DMWS+G I L F G + E L+ + ++ + S
Sbjct: 187 EIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 596 KLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
L D + + L DP R+T ++L+H
Sbjct: 246 -----------------------------ALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Score = 30.7 bits (70), Expect = 2.4
Identities = 7/24 (29%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
G + VV + ++K T A K
Sbjct: 21 SGQFAVVKKCREKSTGLQYA-AKF 43
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 153 bits (389), Expect = 4e-40
Identities = 83/391 (21%), Positives = 135/391 (34%), Gaps = 75/391 (19%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVV 431
+G + VV R + A + +K RE +HPNIV + + +
Sbjct: 21 KGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI- 79
Query: 432 GSNMDKIFIVMDYVE-----HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNW 486
S +++ D V D+ ++ + + +QQ+L AV H H
Sbjct: 80 -SEEGHHYLIFDLVTGGELFEDIV--------AREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 487 ILHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKE 543
++HR+LK NLLL+ + +K+ DFGLA E + + T Y SPE+L
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK-DP 189
Query: 544 YSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKM 603
Y P+D+W+ G I L P F + +I W + A K
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP-EA--K- 245
Query: 604 TFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE----SPL 659
DL+ K LT +P RITA EAL+H + S +
Sbjct: 246 -------------------------DLINKMLTINPSKRITAAEALKHPWISHRSTVASC 280
Query: 660 PIDPAMFP---TWPAKSELAHKKAAMASPKPPSGGHNYKQLEDNEEGFHMGMMERSRAPV 716
+ A+ +L K A + KQ E + +
Sbjct: 281 MHRQETVDCLKKFNARRKL--KGAILTVMLATRNFSVRKQ-EIIKVTEQL---------- 327
Query: 717 PGFSWGELDQDVDMEIELEKDTLPPYLPAIQ 747
++ + + E P + A +
Sbjct: 328 -------IEAISNGDFESYTKMCDPGMTAFE 351
Score = 31.9 bits (73), Expect = 1.2
Identities = 5/24 (20%), Positives = 8/24 (33%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
+G + VV R + A
Sbjct: 21 KGAFSVVRRCVKVLAGQEYA-AMI 43
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 150 bits (381), Expect = 8e-40
Identities = 83/397 (20%), Positives = 146/397 (36%), Gaps = 72/397 (18%)
Query: 281 SEDSSQDSSSSDEEENDENEDKADKKEKKAKKRKKEDASPNESERDVSPHVIMDQDVDME 340
D+ + + ++++++A R D + + D
Sbjct: 10 GVDNKFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGT 69
Query: 341 IELEKDTLPPYLPAIQGCRSVEEFKCLNRIEE----GTYGVVYRAKDKRTDEIVALKRLK 396
L ++ P + + +EF ++ G VV R + T A+K ++
Sbjct: 70 ENLYFQSMGP-EDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIME 128
Query: 397 MEKEK------EGFPITSLREINTLLK-AQHPNIVTVREIVVGSNMDKIFIVMDYVE--- 446
+ E+ E + RE + L + A HP+I+T+ + + +F+V D +
Sbjct: 129 VTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY--ESSSFMFLVFDLMRKGE 186
Query: 447 -----HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSH 501
+ +L E E + +M+ LL AV+ LH N I+HRDLK N+LL
Sbjct: 187 LFDYLTEKVALSEK-----------ETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD 235
Query: 502 RGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGC-----KEYSTPIDMWSVGCI 556
+++ DFG + P + + T Y +PE+L Y +D+W+ G I
Sbjct: 236 NMQIRLSDFGFSCHLE-PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVI 294
Query: 557 FAEFLCMEPLFTGKSDLEQLSRIFKTMGTPN--EKIWPGFSKLPAVQKMTFAEYPNVGGL 614
L P F + + L I + G W S K
Sbjct: 295 LFTLLAGSPPFWHRRQILMLRMIME--GQYQFSSPEWDDRSSTV---K------------ 337
Query: 615 KTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
DL+ + L DP R+TA++AL+H
Sbjct: 338 --------------DLISRLLQVDPEARLTAEQALQH 360
Score = 30.8 bits (70), Expect = 2.4
Identities = 7/24 (29%), Positives = 8/24 (33%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
G VV R + T A K
Sbjct: 104 RGVSSVVRRCVHRATGHEFA-VKI 126
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 149 bits (379), Expect = 1e-39
Identities = 68/293 (23%), Positives = 112/293 (38%), Gaps = 59/293 (20%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLK-AQHPNIVTVREIV 430
G+Y V R K T+ A+K + K EI LL+ QHPNI+T+++
Sbjct: 32 VGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKD-- 83
Query: 431 VGSNMDKIFIVMDYVE--------HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHL 482
V + +++V + ++ K E E ++ + V +L
Sbjct: 84 VYDDGKYVYVVTELMKGGELLDKILRQKFFSER-----------EASAVLFTITKTVEYL 132
Query: 483 HDNWILHRDLKTSNLLLSHRG----ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELL 538
H ++HRDLK SN+L +++ DFG A++ + T + +PE+L
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 192
Query: 539 LGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLP 598
+ Y D+WS+G + L F D + I +I G L
Sbjct: 193 ER-QGYDAACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEIL-------ARIGSGKFSLS 243
Query: 599 AVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
+ +V ++ DL+ K L DP R+TA LRH
Sbjct: 244 G------GYWNSV------------SDTAKDLVSKMLHVDPHQRLTAALVLRH 278
Score = 30.3 bits (69), Expect = 3.6
Identities = 8/24 (33%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
G+Y V R K T+ A K
Sbjct: 32 VGSYSVCKRCIHKATNMEFA-VKI 54
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 156 bits (395), Expect = 1e-39
Identities = 78/307 (25%), Positives = 122/307 (39%), Gaps = 23/307 (7%)
Query: 359 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSL-REINTLLK 417
++ ++ R+ G +G V R + T E VA+K+ + E + EI + K
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK--NRERWCLEIQIMKK 68
Query: 418 AQHPNIVTVREIVVGSNM----DKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLM 472
HPN+V+ RE+ G D + M+Y E D++ + G ++ L+
Sbjct: 69 LNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ-FENCCGLKEGPIRTLL 127
Query: 473 QQLLNAVAHLHDNWILHRDLKTSNLLLS---HRGILKVGDFGLAREYGSPLKHYTPIVVT 529
+ +A+ +LH+N I+HRDLK N++L R I K+ D G A+E V T
Sbjct: 128 SDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE-FVGT 186
Query: 530 LWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEK 589
L Y +PELL K+Y+ +D WS G + E + F Q + NE
Sbjct: 187 LQYLAPELLEQ-KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVR--EKSNEH 243
Query: 590 IWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEAL 649
I AV+ + PN IL L L + R T +
Sbjct: 244 IVVYDDLTGAVKFSSVLPTPN-------HLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296
Query: 650 RHDYFSE 656
F
Sbjct: 297 NVGCFQA 303
Score = 31.6 bits (71), Expect = 1.8
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 750 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
++ ++ R+ G +G V R + T E VA
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVA 43
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 149 bits (378), Expect = 2e-39
Identities = 70/295 (23%), Positives = 117/295 (39%), Gaps = 60/295 (20%)
Query: 373 GTYGVVYRAKDKRTDEIVALKRL---KMEKEKEGFPITSL-REINTLLKAQHPNIVTVRE 428
G + +V + ++K T A K + + + G + RE++ L + HPNI+T+ +
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHD 82
Query: 429 IVVGSNMDKIFIVMDYVE--------HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVA 480
+ N + ++++ V +SL E E ++Q+L+ V
Sbjct: 83 VY--ENRTDVVLILELVSGGELFDFLAQKESLSEE-----------EATSFIKQILDGVN 129
Query: 481 HLHDNWILHRDLKTSNLLLSHR----GILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPE 536
+LH I H DLK N++L + +K+ DFGLA E + I T + +PE
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPE 188
Query: 537 LLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSK 596
++ + DMWS+G I L F G + E L+ I +E+ + S
Sbjct: 189 IVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS- 246
Query: 597 LPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
EL D + K L + R+T EALRH
Sbjct: 247 ----------------------------ELAKDFIRKLLVKETRKRLTIQEALRH 273
Score = 29.6 bits (67), Expect = 5.6
Identities = 6/23 (26%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 764 GTYGVVYRAKDKRTDEIVAPCKS 786
G + +V + ++K T A K
Sbjct: 23 GQFAIVKKCREKSTGLEYA-AKF 44
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 148 bits (376), Expect = 2e-39
Identities = 69/296 (23%), Positives = 112/296 (37%), Gaps = 62/296 (20%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLK-AQHPNIVTVREIV 430
G G V +RT + ALK L + +E++ + + P+IV + ++
Sbjct: 39 LGVNGKVLECFHRRTGQKCALKLLYDSPKAR-------QEVDHHWQASGGPHIVCILDVY 91
Query: 431 --VGSNMDKIFIVMDY----------VEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
+ + I+M+ E ++ E E +M+ + A
Sbjct: 92 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTER-----------EAAEIMRDIGTA 140
Query: 479 VAHLHDNWILHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSP 535
+ LH + I HRD+K NLL + + +LK+ DFG A+E TP T +Y +P
Sbjct: 141 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTP-CYTPYYVAP 198
Query: 536 ELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFS 595
E+L K Y DMWS+G I LC P F + + + +I G
Sbjct: 199 EVLGPEK-YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR-------RIRLGQY 250
Query: 596 KLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
P E+ V +E L+ L DP R+T + + H
Sbjct: 251 GFPN------PEWSEV------------SEDAKQLIRLLLKTDPTERLTITQFMNH 288
Score = 30.4 bits (69), Expect = 3.0
Identities = 7/24 (29%), Positives = 9/24 (37%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
G G V +RT + A K
Sbjct: 39 LGVNGKVLECFHRRTGQKCA-LKL 61
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 149 bits (377), Expect = 3e-39
Identities = 73/291 (25%), Positives = 109/291 (37%), Gaps = 55/291 (18%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVV 431
+G + VV R K T A K + +K RE K QHPNIV + + +
Sbjct: 39 KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI- 97
Query: 432 GSNMDKIFIVMDYVE--------HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLH 483
++V D V + E + +QQ+L ++A+ H
Sbjct: 98 -QEESFHYLVFDLVTGGELFEDIVAREFYSEA-----------DASHCIQQILESIAYCH 145
Query: 484 DNWILHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLG 540
N I+HR+LK NLLL+ + +K+ DFGLA E + + T Y SPE+L
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKK 204
Query: 541 CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAV 600
YS P+D+W+ G I L P F + ++I W +
Sbjct: 205 -DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVT----- 258
Query: 601 QKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
L+ LT +P RITAD+AL+
Sbjct: 259 ------------------------PEAKSLIDSMLTVNPKKRITADQALKV 285
Score = 30.7 bits (70), Expect = 2.5
Identities = 8/24 (33%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
+G + VV R K T A K
Sbjct: 39 KGAFSVVRRCVHKTTGLEFA-AKI 61
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 147 bits (373), Expect = 7e-39
Identities = 83/293 (28%), Positives = 125/293 (42%), Gaps = 62/293 (21%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVV 431
G +VYR K K T + ALK LK +K+ EI LL+ HPNI+ ++EI
Sbjct: 63 RGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV----RTEIGVLLRLSHPNIIKLKEIF- 117
Query: 432 GSNMDKIFIVMDYVE--------HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLH 483
+I +V++ V + E + ++Q+L AVA+LH
Sbjct: 118 -ETPTEISLVLELVTGGELFDRIVEKGYYSERDAAD-----------AVKQILEAVAYLH 165
Query: 484 DNWILHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLG 540
+N I+HRDLK NLL + LK+ DFGL++ + T + T Y +PE+L G
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT-VCGTPGYCAPEILRG 224
Query: 541 CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAV 600
C Y +DMWSVG I LC F + + +F +I
Sbjct: 225 CA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQ---FMF-------RRILNC------- 266
Query: 601 QKMTF-AEY-PNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
+ F + + V + DL+ K + DP R+T +AL+H
Sbjct: 267 -EYYFISPWWDEV------------SLNAKDLVRKLIVLDPKKRLTTFQALQH 306
Score = 30.0 bits (68), Expect = 4.7
Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
G +VYR K K T + A K
Sbjct: 63 RGATSIVYRCKQKGTQKPYA-LKV 85
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 146 bits (371), Expect = 9e-39
Identities = 76/328 (23%), Positives = 127/328 (38%), Gaps = 60/328 (18%)
Query: 373 GTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQH-PNIVTVREIVV 431
G + VV + K T + A K LK + + L EI L A+ P ++ + E V
Sbjct: 40 GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE--V 97
Query: 432 GSNMDKIFIVMDY----------VEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAH 481
N +I ++++Y + + + E +V L++Q+L V +
Sbjct: 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSEN-----------DVIRLIKQILEGVYY 146
Query: 482 LHDNWILHRDLKTSNLLLSHR---GILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELL 538
LH N I+H DLK N+LLS G +K+ DFG++R+ G I+ T Y +PE+L
Sbjct: 147 LHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-HACELREIMGTPEYLAPEIL 205
Query: 539 LGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLP 598
+T DMW++G I L F G+ + E I + +E+ + S
Sbjct: 206 NY-DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVS--- 261
Query: 599 AVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSESP 658
+L D + L +P R TA+ L H + +
Sbjct: 262 --------------------------QLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW- 294
Query: 659 LPIDPAMFPTWPAKSELAHKKAAMASPK 686
+ P + S + +S
Sbjct: 295 -DFENLFHPEETSSSSQTQDHSVRSSED 321
Score = 30.3 bits (69), Expect = 3.1
Identities = 7/23 (30%), Positives = 10/23 (43%), Gaps = 1/23 (4%)
Query: 764 GTYGVVYRAKDKRTDEIVAPCKS 786
G + VV + K T + A K
Sbjct: 40 GKFAVVRQCISKSTGQEYA-AKF 61
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 148 bits (375), Expect = 1e-38
Identities = 48/356 (13%), Positives = 103/356 (28%), Gaps = 74/356 (20%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLRE----INTLLKAQHP------ 421
+ A D+ T E + + I ++E + L ++
Sbjct: 88 QEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVH 147
Query: 422 -NIVTVREIVVGSNMDKI---------------FIVMDYVEHDMKSLMETMRSKKQV--- 462
+ ++V K+ F + ++ ++++ E + S
Sbjct: 148 LRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKS 207
Query: 463 FIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLK- 521
+ L Q++ +A LH ++H L+ +++L RG + + F G+
Sbjct: 208 LVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVS 267
Query: 522 HYTPIVVTLWYRSPELLLGCKE----YSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLS 577
+ +L + + D W++G C + T + L
Sbjct: 268 PIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSE 327
Query: 578 RIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTY 637
IF++ V+ LL FL Y
Sbjct: 328 WIFRS--------CKNIP--QPVR---------------------------ALLEGFLRY 350
Query: 638 DPVTRITADEALRHDYFSESPLPIDPAMFPTWPAKSELAHKKAAMAS--PKPPSGG 691
R+ +A+ + + + A+ P + E + A S +P G
Sbjct: 351 PKEDRLLPLQAMETPEYEQLRTELSAAL-PLYQTDGEPTREGGAPPSGTSQPDEAG 405
Score = 34.3 bits (78), Expect = 0.19
Identities = 4/20 (20%), Positives = 6/20 (30%)
Query: 763 EGTYGVVYRAKDKRTDEIVA 782
+ A D+ T E
Sbjct: 88 QEDPYAYLEATDQETGESFE 107
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 144 bits (366), Expect = 3e-38
Identities = 65/321 (20%), Positives = 117/321 (36%), Gaps = 66/321 (20%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQ-HPNIVTVREIV 430
EG + V + T + A+K +EK+ RE+ L + Q H N++ + E
Sbjct: 23 EGAHARVQTCINLITSQEYAVK--IIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 431 VGSNMDKIFIVMDYVE--------HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHL 482
D+ ++V + + H + E E ++Q + +A+ L
Sbjct: 81 --EEEDRFYLVFEKMRGGSILSHIHKRRHFNEL-----------EASVVVQDVASALDFL 127
Query: 483 HDNWILHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVV--------TLW 531
H+ I HRDLK N+L H +K+ DF L +PI +
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI-KLNGDCSPISTPELLTPCGSAE 186
Query: 532 YRSPELLLGC----KEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPN 587
Y +PE++ Y D+WS+G I L P F G+ + +
Sbjct: 187 YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246
Query: 588 EKIWPGFSKLPAVQKMTF----AEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRI 643
+ ++Q+ + ++ ++ + DL+ K L D R+
Sbjct: 247 NML------FESIQEGKYEFPDKDWAHI------------SCAAKDLISKLLVRDAKQRL 288
Query: 644 TADEALRH----DYFSESPLP 660
+A + L+H E+ LP
Sbjct: 289 SAAQVLQHPWVQGCAPENTLP 309
Score = 31.1 bits (71), Expect = 2.1
Identities = 6/24 (25%), Positives = 9/24 (37%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
EG + V + T + A K
Sbjct: 23 EGAHARVQTCINLITSQEYA-VKI 45
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 143 bits (362), Expect = 6e-38
Identities = 69/309 (22%), Positives = 122/309 (39%), Gaps = 61/309 (19%)
Query: 372 EGTYGVVYRAKDKRTDEIVALK---RLKMEKEKEGFPITSL------------------- 409
+G+YGVV A ++ + A+K + K+ ++
Sbjct: 23 KGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQ 82
Query: 410 --REINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGE 467
+EI L K HPN+V + E++ N D +++V + V +ME K +
Sbjct: 83 VYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQ--GPVMEVPTLKP--LSEDQ 138
Query: 468 VKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIV 527
+ Q L+ + +LH I+HRD+K SNLL+ G +K+ DFG++ E+ + V
Sbjct: 139 ARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV 198
Query: 528 VTLWYRSPELLLGC-KEYSTP-IDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGT 585
T + +PE L K +S +D+W++G F+ + F + + S+I
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKS--QA 256
Query: 586 PNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITA 645
P ++ LK DL+ + L +P +RI
Sbjct: 257 LEFPDQPDIAE----------------DLK-------------DLITRMLDKNPESRIVV 287
Query: 646 DEALRHDYF 654
E H +
Sbjct: 288 PEIKLHPWV 296
Score = 29.5 bits (67), Expect = 5.6
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 763 EGTYGVVYRAKDKRTDEIVA 782
+G+YGVV A ++ + A
Sbjct: 23 KGSYGVVKLAYNENDNTYYA 42
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 146 bits (369), Expect = 6e-38
Identities = 77/297 (25%), Positives = 118/297 (39%), Gaps = 63/297 (21%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRL-KMEKEKEGFPITSLREINTLLKAQ-HPNIVTVREI 429
G G V + +KRT E ALK L K + RE+ +A P+IV + ++
Sbjct: 72 LGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIVRIVDV 123
Query: 430 V--VGSNMDKIFIVMDY----------VEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLN 477
+ + + IVM+ + ++ E E +M+ +
Sbjct: 124 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER-----------EASEIMKSIGE 172
Query: 478 AVAHLHDNWILHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRS 534
A+ +LH I HRD+K NLL + + ILK+ DFG A+E S TP T +Y +
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVA 231
Query: 535 PELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGF 594
PE +LG ++Y DMWS+G I LC P F L + +I G
Sbjct: 232 PE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK-------TRIRMGQ 283
Query: 595 SKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
+ P E+ V +E L+ L +P R+T E + H
Sbjct: 284 YEFPN------PEWSEV------------SEEVKMLIRNLLKTEPTQRMTITEFMNH 322
Score = 30.1 bits (68), Expect = 4.2
Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
G G V + +KRT E A K
Sbjct: 72 LGINGKVLQIFNKRTQEKFA-LKM 94
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 143 bits (362), Expect = 1e-37
Identities = 71/350 (20%), Positives = 123/350 (35%), Gaps = 66/350 (18%)
Query: 313 RKKEDASPNESERDVSPHVIMDQDVDMEIELEKDTLPPYLPAIQGCRSVEEFKCLNRIEE 372
K +S + + + P ++ V + +L+ V R+
Sbjct: 16 LAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREE-------VHWMTHQPRVGR 68
Query: 373 GTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVVG 432
G++G V+R KDK+T A+K++++E + E+ P IV + V
Sbjct: 69 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRV-------EELVACAGLSSPRIVPLYGAVRE 121
Query: 433 SNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDL 492
+ I M+ +E SL + ++ + Q L + +LH ILH D+
Sbjct: 122 G--PWVNIFMELLE--GGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 493 KTSNLLLSHRGIL-KVGDFGLAR-----EYGSPLKHYTPIVVTLWYRSPELLLGCKEYST 546
K N+LLS G + DFG A G L I T + +PE+++G K
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDA 235
Query: 547 PIDMWSVGCIFAEFLCMEPLFTGK---SDLEQLSRIFK--TMGTPNEKIWPGFSKLPAVQ 601
+D+WS C+ + G + + K + P +I P +
Sbjct: 236 KVDIWSSCCMMLH------MLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCA------ 283
Query: 602 KMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
L + + L +PV R +A E R
Sbjct: 284 -----------------------PLTAQAIQEGLRKEPVHRASAMELRRK 310
Score = 36.3 bits (84), Expect = 0.046
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 750 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
V R+ G++G V+R KDK+T A
Sbjct: 55 EEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCA 87
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 140 bits (355), Expect = 4e-37
Identities = 73/288 (25%), Positives = 117/288 (40%), Gaps = 48/288 (16%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVV 431
+GTYG+VY +D +A+K + + P+ EI +H NIV
Sbjct: 32 KGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPL--HEEIALHKHLKHKNIVQYLGSFS 89
Query: 432 GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGE--VKCLMQQLLNAVAHLHDNWILH 489
+ I I M+ V SL +RSK E + +Q+L + +LHDN I+H
Sbjct: 90 EN--GFIKIFMEQVPGG--SLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 490 RDLKTSNLLL-SHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKE-YSTP 547
RD+K N+L+ ++ G+LK+ DFG ++ TL Y +PE++ Y
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 205
Query: 548 IDMWSVGCIFAEFLCMEPLFTGK---SDL-EQLSRIFKTMGTPNEKIWPGFSKLPAVQKM 603
D+WS+GC E + TGK +L E + +FK K+ P ++P
Sbjct: 206 ADIWSLGCTIIE------MATGKPPFYELGEPQAAMFK---VGMFKVHP---EIP----- 248
Query: 604 TFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
++ + K DP R A++ L
Sbjct: 249 -----------------ESMSAEAKAFILKCFEPDPDKRACANDLLVD 279
Score = 31.1 bits (71), Expect = 1.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 763 EGTYGVVYRAKDKRTDEIVA 782
+GTYG+VY +D +A
Sbjct: 32 KGTYGIVYAGRDLSNQVRIA 51
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 138 bits (351), Expect = 2e-36
Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 72/291 (24%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRL-KMEKEKEGFPITSLREINTLLK-AQHPNIVTVREI 429
G G V + +KRT E ALK L K + RE+ + +Q P+IV + ++
Sbjct: 28 LGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIVRIVDV 79
Query: 430 V--VGSNMDKIFIVMDYV---EHDMKSLMETMRSKK-QVFIPGEVKCLMQQLLNAVAHLH 483
+ + + IVM+ + E L ++ + Q F E +M+ + A+ +LH
Sbjct: 80 YENLYAGRKCLLIVMECLDGGE-----LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 484 DNWILHRDLKTSNLLLSHRG---ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLG 540
I HRD+K NLL + + ILK+ DFG A E
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---------------------KETTG- 172
Query: 541 CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAV 600
++Y DMWS+G I LC P F L + +I G + P
Sbjct: 173 -EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK-------TRIRMGQYEFPN- 223
Query: 601 QKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRH 651
E+ V +E L+ L +P R+T E + H
Sbjct: 224 -----PEWSEV------------SEEVKMLIRNLLKTEPTQRMTITEFMNH 257
Score = 31.1 bits (71), Expect = 1.8
Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 763 EGTYGVVYRAKDKRTDEIVAPCKS 786
G G V + +KRT E A K
Sbjct: 28 LGINGKVLQIFNKRTQEKFA-LKM 50
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 135 bits (341), Expect = 2e-35
Identities = 77/295 (26%), Positives = 128/295 (43%), Gaps = 63/295 (21%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEK-EKEGFPITSLREINTLLKAQHPNIVTVREIV 430
EG++ V A T + VALK + + K REI+ L +HP+I+ + +++
Sbjct: 23 EGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 82
Query: 431 VGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHR 490
+ D+I +V++Y +++ + ++ E + QQ+++AV + H + I+HR
Sbjct: 83 --KSKDEIIMVIEYAGNELFDYI----VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHR 136
Query: 491 DLKTSNLLLSHRGILKVGDFGLAREY----------GSPLKHYTPIVVTLWYRSPELLLG 540
DLK NLLL +K+ DFGL+ GSP Y +PE++ G
Sbjct: 137 DLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN-----------YAAPEVISG 185
Query: 541 CKEYSTP-IDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPA 599
K Y+ P +D+WS G I LC F D E + +FK I G LP
Sbjct: 186 -KLYAGPEVDVWSCGVILYVMLCRRLPF----DDESIPVLFK-------NISNGVYTLP- 232
Query: 600 VQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYF 654
L+ L+ + L +P+ RI+ E ++ D+F
Sbjct: 233 ---------------------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 266
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 135 bits (342), Expect = 5e-35
Identities = 70/366 (19%), Positives = 118/366 (32%), Gaps = 109/366 (29%)
Query: 359 RSVEEFKCLNRIEEGTYGVVYRAKDKRTD----------------------EIVALKRL- 395
R + +F+ + + G +GVV+ AK+K D E+ AL +L
Sbjct: 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 62
Query: 396 ---------------------------------KMEKEKEGFPITSLREINTLLKAQHPN 422
+I + N
Sbjct: 63 HPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKN 122
Query: 423 IVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCL--MQQLLNAVA 480
V ++ S ++I M ++L + M + + CL Q+ AV
Sbjct: 123 TV--GQLQPSSPKVYLYIQMQLCRK--ENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVE 178
Query: 481 HLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR------------EYGSPLKHYTPIVV 528
LH ++HRDLK SN+ + ++KVGDFGL +T V
Sbjct: 179 FLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238
Query: 529 TLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNE 588
T Y SPE + G YS +D++S+G I E L T + ++ + N
Sbjct: 239 TKLYMSPEQIHG-NNYSHKVDIFSLGLILFELLY--SFSTQMERVRIITDV------RNL 289
Query: 589 KIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEA 648
K F++ +YP + ++ L+ P R A +
Sbjct: 290 KFPLLFTQ----------KYPQE----------------HMMVQDMLSPSPTERPEATDI 323
Query: 649 LRHDYF 654
+ + F
Sbjct: 324 IENAIF 329
Score = 33.3 bits (76), Expect = 0.37
Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 750 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVAPCKSGNGKFWLENFPSRIRTYHLQVE- 808
R + +F+ + + G +GVV+ AK+K D A K + L N +V+
Sbjct: 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYA-IK----RIRLPNRELAREKVMREVKA 57
Query: 809 -SELNHLVTENPGGPLNKKEQPKWRPMQISNPSTKLRQARSM 849
++L H + KW+ +
Sbjct: 58 LAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPL 99
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 133 bits (337), Expect = 8e-35
Identities = 81/295 (27%), Positives = 121/295 (41%), Gaps = 62/295 (21%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEK-EKEGFPITSLREINTLLKAQHPNIVTVREIV 430
GT+G V + + T VA+K L +K REI L +HP+I+ + +++
Sbjct: 21 VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI 80
Query: 431 VGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHR 490
S F+VM+YV L + + K E + L QQ+L+AV + H + ++HR
Sbjct: 81 --STPTDFFMVMEYVSG--GELFDYI-CKHGRVEEMEARRLFQQILSAVDYCHRHMVVHR 135
Query: 491 DLKTSNLLLSHRGILKVGDFGLAREY----------GSPLKHYTPIVVTLWYRSPELLLG 540
DLK N+LL K+ DFGL+ GSP Y +PE++ G
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPN-----------YAAPEVISG 184
Query: 541 CKEYSTP-IDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPA 599
+ Y+ P +D+WS G I LC F D E + +FK KI G +P
Sbjct: 185 -RLYAGPEVDIWSCGVILYALLCGTLPF----DDEHVPTLFK-------KIRGGVFYIP- 231
Query: 600 VQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYF 654
L LL L DP+ R T + H++F
Sbjct: 232 ---------------------EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWF 265
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 134 bits (340), Expect = 9e-35
Identities = 67/304 (22%), Positives = 128/304 (42%), Gaps = 51/304 (16%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVV 431
+G + V A+ T VA+K + + RE+ + HPNIV + E++
Sbjct: 25 KGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI- 83
Query: 432 GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRD 491
++++M+Y + + + + ++ E + +Q+++AV + H I+HRD
Sbjct: 84 -ETEKTLYLIMEYASG--GEVFDYLVAHGRM-KEKEARSKFRQIVSAVQYCHQKRIVHRD 139
Query: 492 LKTSNLLLSHRGILKVGDFGLAREY--GSPLKHY--TPIVVTLWYRSPELLLGCKEYSTP 547
LK NLLL +K+ DFG + E+ G L + P Y +PEL G K+Y P
Sbjct: 140 LKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAP-----PYAAPELFQG-KKYDGP 193
Query: 548 -IDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFA 606
+D+WS+G I + F G++ L + + ++ G ++P
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDGQN----LKELRE-------RVLRGKYRIP-------- 234
Query: 607 EYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYF--SESPLPIDPA 664
++ +LL +FL +P+ R T ++ ++ + + P
Sbjct: 235 --------------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPF 280
Query: 665 MFPT 668
+ P
Sbjct: 281 VEPE 284
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 132 bits (333), Expect = 1e-33
Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 64/305 (20%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEK-EKEGFPITSLREINTLLKAQHPNIVTVREIV 430
EG++G V A +T + VALK + + +K + REI+ L +HP+I+ + +++
Sbjct: 19 EGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI 78
Query: 431 VGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHR 490
+ I +V++Y ++ + +K+ E + QQ++ A+ + H + I+HR
Sbjct: 79 --TTPTDIVMVIEYAGGELFDYI----VEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHR 132
Query: 491 DLKTSNLLLSHRGILKVGDFGLAREY----------GSPLKHYTPIVVTLWYRSPELLLG 540
DLK NLLL +K+ DFGL+ GSP Y +PE++ G
Sbjct: 133 DLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPN-----------YAAPEVING 181
Query: 541 CKEYSTP-IDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPA 599
K Y+ P +D+WS G + L F D E + +FK K+ +P
Sbjct: 182 -KLYAGPEVDVWSCGIVLYVMLVGRLPF----DDEFIPNLFK-------KVNSCVYVMP- 228
Query: 600 VQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSES-P 658
L+ L+ + + DP+ RIT E R +F+ + P
Sbjct: 229 ---------------------DFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLP 267
Query: 659 LPIDP 663
+ P
Sbjct: 268 DYLRP 272
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 132 bits (333), Expect = 1e-33
Identities = 47/275 (17%), Positives = 95/275 (34%), Gaps = 28/275 (10%)
Query: 344 EKDTLPPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAK-----DKRTDEIVALKRLKME 398
+ LP P + + + + EG + VY A D + + LK K
Sbjct: 47 WQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA 106
Query: 399 KEKEGFPITSLREINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMR 457
E + T L E L + + + + +V + + + + + +
Sbjct: 107 NPWEFYIGTQLMER--LKPSMQHMFMKFYSAHLFQ--NGSVLVGELYSYGTLLNAINLYK 162
Query: 458 SKKQVFIP-GEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGI-----------L 505
+ + +P G V ++L + +HD I+H D+K N +L + + L
Sbjct: 163 NTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGL 222
Query: 506 KVGDFGLAREYGSPLKHYTPIVV--TLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCM 563
+ D G + + K T ++ E+L K ++ ID + V L
Sbjct: 223 ALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCMLFG 281
Query: 564 EPLFTGKSDLE-QLSRIFKTMGTPNEKIWPGFSKL 597
+ E + +F+ P+ +W F +
Sbjct: 282 TYMKVKNEGGECKPEGLFR--RLPHLDMWNEFFHV 314
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 131 bits (331), Expect = 2e-33
Identities = 69/392 (17%), Positives = 130/392 (33%), Gaps = 84/392 (21%)
Query: 339 MEIELEKDTLPPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKME 398
M +E + A +++ ++ + G +G V+ A DK ++ V +K +K E
Sbjct: 1 MALEEPPKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKE 60
Query: 399 KEKEGFPITSL------REINTLLKAQHPNIVTVREIVVGSNMDKIFIVM---------- 442
K E I EI L + +H NI+ V +I N +VM
Sbjct: 61 KVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF--ENQGFFQLVMEKHGSGLDLF 118
Query: 443 DYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHR 502
+++ + + +QL++AV +L I+HRD+K N++++
Sbjct: 119 AFID------------RHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAED 166
Query: 503 GILKVGDFGLAREY--GSPLKHY--TPIVVTLWYRSPELLLGCKEYSTP-IDMWSVGCIF 557
+K+ DFG A G + T Y +PE+L+G Y P ++MWS+G
Sbjct: 167 FTIKLIDFGSAAYLERGKLFYTFCGTIE-----YCAPEVLMG-NPYRGPELEMWSLGVTL 220
Query: 558 AEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTK 617
+ E F E+ P
Sbjct: 221 YTLVFEENPFCEL-----------------EETVEAAIHPP------------------- 244
Query: 618 VAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE----SPLPIDPAMFPTWPAKS 673
++++ L+ L P R T ++ + + ++ + + P
Sbjct: 245 ---YLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESG 301
Query: 674 ELAHKKAAMASPKPPSGGHNYKQLEDNEEGFH 705
L+ M + + H
Sbjct: 302 VLSAASLEMGNRSLSDVAQAQELCGGEGHHHH 333
Score = 28.9 bits (65), Expect = 9.4
Identities = 10/53 (18%), Positives = 22/53 (41%)
Query: 730 MEIELEKDTLPPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
M +E + A +++ ++ + G +G V+ A DK ++ V
Sbjct: 1 MALEEPPKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVV 53
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 129 bits (327), Expect = 3e-33
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+E + + G +GVV +AK + + VA+K+++ E E++ F + E+ L + HP
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAF----IVELRQLSRVNHP 61
Query: 422 NIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQV--FIPGEVKCLMQQLLNAV 479
NIV + G+ ++ + +VM+Y E SL + + + + Q V
Sbjct: 62 NIVKL----YGACLNPVCLVMEYAEGG--SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 480 AHLHD---NWILHRDLKTSNLLLSHRG-ILKVGDFGLAREYGSPLKHYTPIVVTLWYRSP 535
A+LH ++HRDLK NLLL G +LK+ DFG A + + H T + + +P
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT---HMTNNKGSAAWMAP 172
Query: 536 ELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQ 575
E+ G YS D++S G I E + F
Sbjct: 173 EVFEG-SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF 211
Score = 30.4 bits (69), Expect = 3.1
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+E + + G +GVV +AK + + VA
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVA 35
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 128 bits (324), Expect = 4e-33
Identities = 68/297 (22%), Positives = 107/297 (36%), Gaps = 62/297 (20%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVV 431
EG YG V A ++ T+E VA+K + M++ P +EI H N+V
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHR- 74
Query: 432 GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRD 491
+ ++ ++Y L + + + + QL+ V +LH I HRD
Sbjct: 75 -REGNIQYLFLEYCSG--GELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130
Query: 492 LKTSNLLLSHRGILKVGDFGLAREY-------------GSPLKHYTPIVVTLWYRSPELL 538
+K NLLL R LK+ DFGLA + G+ Y +PELL
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP-----------YVAPELL 179
Query: 539 LGCKEYS-TPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKL 597
+E+ P+D+WS G + L E + SD Q +
Sbjct: 180 KR-REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------DWKEKKTYLN 229
Query: 598 PAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYF 654
P + + LL K L +P RIT + + ++
Sbjct: 230 PWKKIDSAPL---------------------ALLHKILVENPSARITIPDIKKDRWY 265
Score = 29.5 bits (67), Expect = 5.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 763 EGTYGVVYRAKDKRTDEIVA 782
EG YG V A ++ T+E VA
Sbjct: 17 EGAYGEVQLAVNRVTEEAVA 36
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 128 bits (325), Expect = 6e-33
Identities = 57/321 (17%), Positives = 112/321 (34%), Gaps = 68/321 (21%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSL----REINTLLK----AQHPNI 423
+G +G V+ VA+K + + P++ E+ L K HP +
Sbjct: 41 KGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGV 100
Query: 424 VTVREIVVGSNMDKIFIVMDYVEH--DMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAH 481
+ + + + +V++ D+ + +K G +C Q++ A+ H
Sbjct: 101 IRLLDWF--ETQEGFMLVLERPLPAQDLFDYIT----EKGPLGEGPSRCFFGQVVAAIQH 154
Query: 482 LHDNWILHRDLKTSNLLL-SHRGILKVGDFGLAREY-GSPLKHY--TPIVVTLWYRSPEL 537
H ++HRD+K N+L+ RG K+ DFG P + T + Y PE
Sbjct: 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRV-----YSPPEW 209
Query: 538 LLGCKEYS-TPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSK 596
+ +Y P +WS+G + + +C + F ++I
Sbjct: 210 ISR-HQYHALPATVWSLGILLYDMVCGDIPFERD-----------------QEILEAELH 251
Query: 597 LPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE 656
P + ++ L+ + L P +R + +E L +
Sbjct: 252 FP----------------------AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT 289
Query: 657 --SPLPIDPAMFPTWPAKSEL 675
+P++P+ P L
Sbjct: 290 PAEDVPLNPSKGGPAPLAWSL 310
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 128 bits (325), Expect = 7e-33
Identities = 56/304 (18%), Positives = 107/304 (35%), Gaps = 60/304 (19%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSL----REINTLLKAQH--PNIVT 425
G +G VY + VA+K ++ ++ + + + E+ L K ++
Sbjct: 53 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 112
Query: 426 VREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDN 485
+ + D ++++ E L + + +++ + Q+L AV H H+
Sbjct: 113 LLDWF--ERPDSFVLILERPEPVQ-DLFDFI-TERGALQEELARSFFWQVLEAVRHCHNC 168
Query: 486 WILHRDLKTSNLLL-SHRGILKVGDFGLAREY-GSPLKHY--TPIVVTLWYRSPELLLGC 541
+LHRD+K N+L+ +RG LK+ DFG + + T + Y PE +
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV-----YSPPEWIRY- 222
Query: 542 KEYS-TPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAV 600
Y +WS+G + + +C + F E+I G
Sbjct: 223 HRYHGRSAAVWSLGILLYDMVCGDIPFEHD-----------------EEIIRGQVFFR-- 263
Query: 601 QKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSESPLP 660
++ L+ L P R T +E H + + LP
Sbjct: 264 --------------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 303
Query: 661 IDPA 664
+ A
Sbjct: 304 QETA 307
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 128 bits (323), Expect = 1e-32
Identities = 72/305 (23%), Positives = 124/305 (40%), Gaps = 40/305 (13%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
++++ I G VV A E VA+KR+ +EK + L+EI + + HP
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSM-DELLKEIQAMSQCHHP 73
Query: 422 NIVTVRE-IVVGSNMDKIFIVMDY-----VEHDMKSLMETMRSKKQVFIPGEVKCLMQQL 475
NIV+ VV D++++VM V +K ++ K V + +++++
Sbjct: 74 NIVSYYTSFVVK---DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 476 LNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLA------REYGSPLKHYTPIVVT 529
L + +LH N +HRD+K N+LL G +++ DFG++ + T V T
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT-FVGT 189
Query: 530 LWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEK 589
+ +PE++ + Y D+WS G E + + + T+
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY---HKYPPMKVLMLTLQND--- 243
Query: 590 IWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEAL 649
P + K +Y + ++ LC L DP R TA E L
Sbjct: 244 --PPSLETGVQDKEMLKKYGKS--FRKMIS-----------LC--LQKDPEKRPTAAELL 286
Query: 650 RHDYF 654
RH +F
Sbjct: 287 RHKFF 291
Score = 43.1 bits (102), Expect = 3e-04
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
++++ I G VV A E VA
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVA 44
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 126 bits (318), Expect = 3e-32
Identities = 47/226 (20%), Positives = 92/226 (40%), Gaps = 22/226 (9%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSL-----REINTLL 416
E + +I +G +G+V++ + + +VA+K L + + + RE+ +
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 417 KAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLL 476
HPNIV + G + +VM++V L + K LM +
Sbjct: 79 NLNHPNIVK----LYGLMHNPPRMVMEFVPCG--DLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 477 NAVAHLHDN--WILHRDLKTSNLLLSHRG-----ILKVGDFGLAREYGSPLKHYTPIVVT 529
+ ++ + I+HRDL++ N+ L KV DFGL+++ + + ++
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV---SGLLGN 189
Query: 530 LWYRSPELLLG-CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLE 574
+ +PE + + Y+ D +S I L E F S +
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235
Score = 35.0 bits (81), Expect = 0.11
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
E + +I +G +G+V++ + + +VA
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVA 48
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 127 bits (321), Expect = 3e-32
Identities = 68/297 (22%), Positives = 107/297 (36%), Gaps = 62/297 (20%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVREIVV 431
EG YG V A ++ T+E VA+K + M++ P +EI H N+V
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHR- 74
Query: 432 GSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRD 491
+ ++ ++Y L + + + + QL+ V +LH I HRD
Sbjct: 75 -REGNIQYLFLEYCSG--GELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130
Query: 492 LKTSNLLLSHRGILKVGDFGLAREY-------------GSPLKHYTPIVVTLWYRSPELL 538
+K NLLL R LK+ DFGLA + G+ Y +PELL
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP-----------YVAPELL 179
Query: 539 LGCKEYS-TPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKL 597
+E+ P+D+WS G + L E + SD Q +
Sbjct: 180 KR-REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------DWKEKKTYLN 229
Query: 598 PAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYF 654
P + + LL K L +P RIT + + ++
Sbjct: 230 PWKKIDSAPL---------------------ALLHKILVENPSARITIPDIKKDRWY 265
Score = 29.2 bits (66), Expect = 6.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 763 EGTYGVVYRAKDKRTDEIVA 782
EG YG V A ++ T+E VA
Sbjct: 17 EGAYGEVQLAVNRVTEEAVA 36
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 127 bits (320), Expect = 9e-32
Identities = 78/293 (26%), Positives = 116/293 (39%), Gaps = 54/293 (18%)
Query: 372 EGTYGVVYRAKDKRTDEIVALK---RLKMEKEKEGFPITSLREINTLLKAQHPNIVTVRE 428
G +GV +DK T E+VA+K R E + REI +HPNIV +E
Sbjct: 30 SGNFGVARLMRDKLTKELVAVKYIERGAAIDEN----VQ--REIINHRSLRHPNIVRFKE 83
Query: 429 IVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWIL 488
++ + I+M+Y L E + F E + QQLL+ V++ H I
Sbjct: 84 VI--LTPTHLAIIMEYASG--GELYERI-CNAGRFSEDEARFFFQQLLSGVSYCHSMQIC 138
Query: 489 HRDLKTSNLLL--SHRGILKVGDFGLAREY--GSPLKHY--TPIVVTLWYRSPELLLGCK 542
HRDLK N LL S LK+ DFG ++ S K TP Y +PE+LL +
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPEVLLR-Q 192
Query: 543 EYSTP-IDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQ 601
EY D+WS G L F + + R ++ ++I +P
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYPF----EDPEEPRDYRKT---IQRILSVKYSIPDDI 245
Query: 602 KMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYF 654
+++ L+ + DP TRI+ E H +F
Sbjct: 246 RIS-------PECC-------------HLISRIFVADPATRISIPEIKTHSWF 278
Score = 28.9 bits (65), Expect = 9.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 763 EGTYGVVYRAKDKRTDEIVA 782
G +GV +DK T E+VA
Sbjct: 30 SGNFGVARLMRDKLTKELVA 49
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 124 bits (313), Expect = 2e-31
Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 47/298 (15%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+++ +I +G G VY A D T + VA++++ ++++ + I + EI + + ++P
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNP 77
Query: 422 NIVTVREIVVGS--NMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
NIV + S D++++VM+Y+ SL + + G++ + ++ L A+
Sbjct: 78 NIVNY----LDSYLVGDELWVVMEYLA--GGSLTDVVTETC--MDEGQIAAVCRECLQAL 129
Query: 480 AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLL 539
LH N ++HRD+K+ N+LL G +K+ DFG + + +V T ++ +PE++
Sbjct: 130 EFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 189
Query: 540 GCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFK--TMGTPNEKIWPGFSKL 597
K Y +D+WS+G + E + EP + + L ++ T GTP + S +
Sbjct: 190 R-KAYGPKVDIWSLGIMAIEMIEGEPPY---LNENPLRALYLIATNGTPELQNPEKLSAI 245
Query: 598 PAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFS 655
+ D L + L D R +A E L+H +
Sbjct: 246 ----------------FR-------------DFLNRCLEMDVEKRGSAKELLQHQFLK 274
Score = 40.8 bits (96), Expect = 0.001
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+++ +I +G G VY A D T + VA
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVA 49
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 123 bits (312), Expect = 2e-31
Identities = 62/303 (20%), Positives = 114/303 (37%), Gaps = 52/303 (17%)
Query: 364 FKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNI 423
K I G++ VY+ D T VA L+ K + E L QHPNI
Sbjct: 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 87
Query: 424 VTVR--EIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAH 481
V I +V + + +L +T + +V ++ +Q+L +
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELMTSG--TL-KTYLKRFKVMKIKVLRSWCRQILKGLQF 144
Query: 482 LHDN--WILHRDLKTSNLLLSHR-GILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELL 538
LH I+HRDLK N+ ++ G +K+GD GLA + ++ T + +PE
Sbjct: 145 LHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK--AVIGTPEFMAPE-- 200
Query: 539 LGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGK---SDLEQLSRIFK--TMGTPNEKIWPG 593
+ ++Y +D+++ G CM + T + S+ + ++I++ T G
Sbjct: 201 MYEEKYDESVDVYAFGM------CMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKV 254
Query: 594 FSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDY 653
P V+ +++ + + R + + L H +
Sbjct: 255 AI--PEVK---------------------------EIIEGCIRQNKDERYSIKDLLNHAF 285
Query: 654 FSE 656
F E
Sbjct: 286 FQE 288
Score = 30.0 bits (68), Expect = 3.7
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 755 FKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
K I G++ VY+ D T VA
Sbjct: 28 LKFDIEIGRGSFKTVYKGLDTETTVEVA 55
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 127 bits (321), Expect = 4e-31
Identities = 82/313 (26%), Positives = 125/313 (39%), Gaps = 62/313 (19%)
Query: 372 EGTYGVVYRAKDKRTDEIVALKRLKMEK-EKEGFPITSLREINTLLKAQHPNIVTVREIV 430
GT+G V K + T VA+K L +K REI L +HP+I+ + +++
Sbjct: 26 VGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI 85
Query: 431 VGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHR 490
S IF+VM+YV L + + K E + L QQ+L+ V + H + ++HR
Sbjct: 86 --STPSDIFMVMEYVSG--GELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHMVVHR 140
Query: 491 DLKTSNLLLSHRGILKVGDFGLAREY----------GSPLKHYTPIVVTLWYRSPELLLG 540
DLK N+LL K+ DFGL+ GSP Y +PE++ G
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPN-----------YAAPEVISG 189
Query: 541 CKEYSTP-IDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPA 599
+ Y+ P +D+WS G I LC F D + + +FK KI G P
Sbjct: 190 -RLYAGPEVDIWSSGVILYALLCGTLPF----DDDHVPTLFK-------KICDGIFYTP- 236
Query: 600 VQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSESPL 659
L LL L DP+ R T + H++F +
Sbjct: 237 ---------------------QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLP 275
Query: 660 PIDPAMFPTWPAK 672
P++ +
Sbjct: 276 KYLFPEDPSYSST 288
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 123 bits (311), Expect = 5e-31
Identities = 67/301 (22%), Positives = 139/301 (46%), Gaps = 43/301 (14%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+I EG+ G+V A++K + VA+K + + K++ + E+ + QH
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELL--FNEVVIMRDYQHF 102
Query: 422 NIVTVREIVVGS--NMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
N+V + S ++++++M++++ +L + + + ++ + + +L A+
Sbjct: 103 NVVEM----YKSYLVGEELWVLMEFLQ--GGALTDIVSQVR--LNEEQIATVCEAVLQAL 154
Query: 480 AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLL 539
A+LH ++HRD+K+ ++LL+ G +K+ DFG + + +V T ++ +PE++
Sbjct: 155 AYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVIS 214
Query: 540 GCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPA 599
Y+T +D+WS+G + E + EP + S ++ + R+ + P K S +
Sbjct: 215 R-SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL-RDSPPPKLKNSHKVSPV-- 270
Query: 600 VQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSESPL 659
L+ D L + L DP R TA E L H + ++ L
Sbjct: 271 --------------LR-------------DFLERMLVRDPQERATAQELLDHPFLLQTGL 303
Query: 660 P 660
P
Sbjct: 304 P 304
Score = 40.8 bits (96), Expect = 0.002
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+I EG+ G+V A++K + VA
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVA 74
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 123 bits (310), Expect = 5e-31
Identities = 67/306 (21%), Positives = 134/306 (43%), Gaps = 50/306 (16%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
E ++ + + +G +G VY+AK+K T + A K ++ + E+E + EI L HP
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDY--IVEIEILATCDHP 76
Query: 422 NIVTVREIVVGS--NMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
IV + +G+ + K++I++++ ++ M + +++ + +Q+L A+
Sbjct: 77 YIVKL----LGAYYHDGKLWIMIEFCP--GGAVDAIMLELDRGLTEPQIQVVCRQMLEAL 130
Query: 480 AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLL 539
LH I+HRDLK N+L++ G +++ DFG++ + L+ + T ++ +PE+++
Sbjct: 131 NFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVM 190
Query: 540 GC----KEYSTPIDMWSVGCIFA-EFLCMEPLFTGKSDLEQLSRIFK--TMGTPNEKIWP 592
Y D+WS+G I E +EP +L + + K P
Sbjct: 191 CETMKDTPYDYKADIWSLG-ITLIEMAQIEPPH---HELNPMRVLLKIAKSDPPTLLTPS 246
Query: 593 GFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHD 652
+S F ++ + + L +P TR +A + L H
Sbjct: 247 KWSV-------EFRDF---------LK-----------IA--LDKNPETRPSAAQLLEHP 277
Query: 653 YFSESP 658
+ S
Sbjct: 278 FVSSIT 283
Score = 41.9 bits (99), Expect = 7e-04
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
E ++ + + +G +G VY+AK+K T + A
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAA 48
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 122 bits (309), Expect = 8e-31
Identities = 75/302 (24%), Positives = 137/302 (45%), Gaps = 49/302 (16%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
E F L ++ EG+YG VY+A K T +IVA+K++ +E + + ++EI+ + + P
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI----IKEISIMQQCDSP 84
Query: 422 NIVTVREIVVGS--NMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
++V GS ++IVM+Y S+ + +R + + E+ ++Q L +
Sbjct: 85 HVVKY----YGSYFKNTDLWIVMEYCG--AGSVSDIIRLRNKTLTEDEIATILQSTLKGL 138
Query: 480 AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLL 539
+LH +HRD+K N+LL+ G K+ DFG+A + + ++ T ++ +PE++
Sbjct: 139 EYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ 198
Query: 540 GCKEYSTPIDMWSVGCIFA-EFLCMEPLFTGKSDLEQLSRIFK--TMGTPNEKIWPGFSK 596
Y+ D+WS+G I A E +P + +D+ + IF T P + +S
Sbjct: 199 E-IGYNCVADIWSLG-ITAIEMAEGKPPY---ADIHPMRAIFMIPTNPPPTFRKPELWSD 253
Query: 597 LPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE 656
F ++ V C L P R TA + L+H +
Sbjct: 254 -------NFTDF---------VK-----------QC--LVKSPEQRATATQLLQHPFVRS 284
Query: 657 SP 658
+
Sbjct: 285 AK 286
Score = 38.9 bits (91), Expect = 0.007
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
E F L ++ EG+YG VY+A K T +IVA
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVA 58
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 121 bits (307), Expect = 1e-30
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 367 LNRIEEGTYGVVYRAKDKRTDEIVALKRLKME-KEKEGFPITSLREINTLLKAQHPNIVT 425
++++ G VY A+D + VA+K + + +EKE RE++ + H NIV+
Sbjct: 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 426 VREIVVGSNMDKIFIVMDYVE-HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHD 484
+ + V D ++VM+Y+E + +E Q+L+ + H HD
Sbjct: 76 MID--VDEEDDCYYLVMEYIEGPTLSEYIE----SHGPLSVDTAINFTNQILDGIKHAHD 129
Query: 485 NWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVV-TLWYRSPELLLGCKE 543
I+HRD+K N+L+ LK+ DFG+A+ T V+ T+ Y SPE G E
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG--E 187
Query: 544 YSTP-IDMWSVGCIFAEFLCMEPLFTGKS 571
+ D++S+G + E L EP F G++
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPPFNGET 216
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 122 bits (309), Expect = 1e-30
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 18/210 (8%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSL-REINTLLKAQH 420
+ F L I G++G VY A+D R E+VA+K++ ++ + +E+ L K +H
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 113
Query: 421 PNIVTVREIVVGS--NMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
PN + G ++VM+Y S + + K+ E+ + L
Sbjct: 114 PNTIQY----RGCYLREHTAWLVMEYCL---GSASDLLEVHKKPLQEVEIAAVTHGALQG 166
Query: 479 VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELL 538
+A+LH + ++HRD+K N+LLS G++K+GDFG A + V T ++ +PE++
Sbjct: 167 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA---SIMAPANS-FVGTPYWMAPEVI 222
Query: 539 LGCKE--YSTPIDMWSVGCIFA-EFLCMEP 565
L E Y +D+WS+G I E +P
Sbjct: 223 LAMDEGQYDGKVDVWSLG-ITCIELAERKP 251
Score = 41.6 bits (98), Expect = 0.001
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ F L I G++G VY A+D R E+VA
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVA 83
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 121 bits (304), Expect = 1e-29
Identities = 60/366 (16%), Positives = 127/366 (34%), Gaps = 29/366 (7%)
Query: 362 EEFKCLNRIEEG--TYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQ 419
++ L I +G V A+ K T E V ++R+ +E E++
Sbjct: 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFN 84
Query: 420 HPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIP-GEVKCLMQQLLNA 478
HPNIV R + +++++V ++ + S + + + + + ++Q +L A
Sbjct: 85 HPNIVPYRATFI--ADNELWVVTSFMAYG--SAKDLICTHFMDGMNELAIAYILQGVLKA 140
Query: 479 VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE-YGSPLKHYT------PIVVTLW 531
+ ++H +HR +K S++L+S G + + + V L
Sbjct: 141 LDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP 200
Query: 532 YRSPELLL-GCKEYSTPIDMWSVGCI----------FAEFLCMEPLF-TGKSDLEQL--S 577
+ SPE+L + Y D++SVG F + + L + L +
Sbjct: 201 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260
Query: 578 RIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTY 637
+ + T P+ G + + + + + L
Sbjct: 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQR 320
Query: 638 DPVTRITADEALRHDYFSESPLPIDPAMFPTWPAKSELAHKKAAMASPKPPSGGHNYKQL 697
+P R +A L H +F + A+ + + + + + + G L
Sbjct: 321 NPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHSGIFGLV-TNL 379
Query: 698 EDNEEG 703
E+ E
Sbjct: 380 EELEVD 385
Score = 35.3 bits (81), Expect = 0.093
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Query: 753 EEFKCLNRIEEG--TYGVVYRAKDKRTDEIVA 782
++ L I +G V A+ K T E V
Sbjct: 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVT 56
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 118 bits (297), Expect = 2e-29
Identities = 49/232 (21%), Positives = 103/232 (44%), Gaps = 22/232 (9%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFP-ITSLREINTLLKA 418
++ + + + G YGVV + + + +I+A+KR++ + + L +++ ++
Sbjct: 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRL--LMDLDISMRT 62
Query: 419 -QHPNIVT-----VREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLM 472
P VT RE ++I M+ ++ + + + K Q + +
Sbjct: 63 VDCPFTVTFYGALFRE-------GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIA 115
Query: 473 QQLLNAVAHLHDNW-ILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLW 531
++ A+ HLH ++HRD+K SN+L++ G +K+ DFG++ +
Sbjct: 116 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI-DAGCKP 174
Query: 532 YRSPELLLG---CKEYSTPIDMWSVGCIFAEFLCME-PLFTGKSDLEQLSRI 579
Y +PE + K YS D+WS+G E + P + + +QL ++
Sbjct: 175 YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
Score = 39.9 bits (94), Expect = 0.003
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 751 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
++ + + + G YGVV + + + +I+A
Sbjct: 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMA 36
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 118 bits (298), Expect = 2e-29
Identities = 71/315 (22%), Positives = 123/315 (39%), Gaps = 66/315 (20%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLK---MEKEKEGFPIT-SLREINTL 415
E+FK + EG++ V A++ T A+K L+ + KE + + RE + +
Sbjct: 28 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK---VPYVTRERDVM 84
Query: 416 LKAQHPNIVTVREIVVGS--NMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPGEVKC 470
+ HP V + + + +K++ + Y E L++ +R K F +
Sbjct: 85 SRLDHPFFVKLY----FTFQDDEKLYFGLSYAKNGE-----LLKYIR-KIGSFDETCTRF 134
Query: 471 LMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE---YGSPLKHYTPIV 527
++++A+ +LH I+HRDLK N+LL+ +++ DFG A+ + + V
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS-FV 193
Query: 528 VTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPN 587
T Y SPELL K D+W++GCI + + P F ++ IF
Sbjct: 194 GTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL----IF------- 241
Query: 588 EKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRIT--- 644
+KI + F E DL+ K L D R+
Sbjct: 242 QKIIKL--------EYDFPEK--------------FFPKARDLVEKLLVLDATKRLGCEE 279
Query: 645 ---ADEALRHDYFSE 656
H +F
Sbjct: 280 MEGYGPLKAHPFFES 294
Score = 31.0 bits (71), Expect = 1.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 751 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
E+FK + EG++ V A++ T A
Sbjct: 28 RPEDFKFGKILGEGSFSTVVLARELATSREYA 59
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 120 bits (302), Expect = 3e-29
Identities = 88/404 (21%), Positives = 146/404 (36%), Gaps = 86/404 (21%)
Query: 328 SPHVIMDQDVDMEIELEKDTLPPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTD 387
I+ D D + + Y G + + ++ G + V+ + D +
Sbjct: 3 QEEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGK 62
Query: 388 EIVALKRLKMEKEKEGFPITSLREINTLLK-----AQHPNIVTVREI-----VVGSNMDK 437
+ VA+K +K E + T+L EI L PN V ++ + G N
Sbjct: 63 KFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTH 119
Query: 438 IFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLH-DNWILHRDLKTSN 496
I +V + + H + + +S Q VK ++QQ+L + +LH I+H D+K N
Sbjct: 120 ICMVFEVLGHHLLKWII--KSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPEN 177
Query: 497 LLL-------------------------------------------------SHRGILKV 507
+LL + + +K+
Sbjct: 178 ILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKI 237
Query: 508 GDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLF 567
D G A KH+T + T YRS E+L+G Y+TP D+WS C+ E + LF
Sbjct: 238 ADLGNAC---WVHKHFTEDIQTRQYRSLEVLIGS-GYNTPADIWSTACMAFELATGDYLF 293
Query: 568 TGKS------DLEQLSRIFKTMGTPNEKIWPG-------FSK---LPAVQKMTFAEYPNV 611
S D + ++ I + +G K+ F+K L + K+ V
Sbjct: 294 EPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV 353
Query: 612 GGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFS 655
K + + D L L P R TA E LRH + +
Sbjct: 354 LVEKYEWSQEEAAGF-TDFLLPMLELIPEKRATAAECLRHPWLN 396
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 118 bits (297), Expect = 3e-29
Identities = 54/206 (26%), Positives = 104/206 (50%), Gaps = 12/206 (5%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
E F L +I +G++G V++ D RT ++VA+K + +E+ ++ +EI L + P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI-EDIQQEITVLSQCDSP 80
Query: 422 NIVTVREIVVGS--NMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
+ GS K++I+M+Y+ S ++ + ++ +++++L +
Sbjct: 81 YVTKY----YGSYLKDTKLWIIMEYLG--GGSALDLLEPGP--LDETQIATILREILKGL 132
Query: 480 AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLL 539
+LH +HRD+K +N+LLS G +K+ DFG+A + V T ++ +PE++
Sbjct: 133 DYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK 192
Query: 540 GCKEYSTPIDMWSVGCIFAEFLCMEP 565
Y + D+WS+G E EP
Sbjct: 193 Q-SAYDSKADIWSLGITAIELARGEP 217
Score = 42.3 bits (100), Expect = 5e-04
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
E F L +I +G++G V++ D RT ++VA
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVA 51
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 116 bits (294), Expect = 4e-29
Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 14/218 (6%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
++ L ++ E G +++ + + D + +K LK+ E L HP
Sbjct: 10 KQLNFLTKLNENHSGELWKGRWQGND--IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 422 NIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLM-QQLLNAVA 480
N++ V ++ ++ + SL + + + +A
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPY--GSLYNVLHEGTNFVVDQSQAVKFALDMARGMA 125
Query: 481 HLH--DNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELL 538
LH + I L + ++++ ++ + + SP + Y P W +PE L
Sbjct: 126 FLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAP----AWV-APEAL 180
Query: 539 LGCKE--YSTPIDMWSVGCIFAEFLCMEPLFTGKSDLE 574
E DMWS + E + E F S++E
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME 218
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 119 bits (299), Expect = 5e-29
Identities = 65/316 (20%), Positives = 127/316 (40%), Gaps = 33/316 (10%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQ 419
++F+ ++ + G GVV++ K + ++A K + +E + +RE+ L +
Sbjct: 31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR-NQIIRELQVLHECN 89
Query: 420 HPNIVT-----VREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQ 474
P IV + +I I M+++ D SL + ++ ++ + +
Sbjct: 90 SPYIVGFYGAFYSD-------GEISICMEHM--DGGSLDQVLKKAGRIPEQ-ILGKVSIA 139
Query: 475 LLNAVAHLHDNW-ILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYR 533
++ + +L + I+HRD+K SN+L++ RG +K+ DFG++ + + + + V T Y
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN-S-FVGTRSYM 197
Query: 534 SPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPG 593
SPE L G YS D+WS+G E D ++L +F + P
Sbjct: 198 SPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIP-PPDAKELELMFGCQVEGDAAETPP 255
Query: 594 FSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDL--------LCKFLTY----DPVT 641
+ P F ++ I+ E L F+ +P
Sbjct: 256 RPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAE 315
Query: 642 RITADEALRHDYFSES 657
R + + H + S
Sbjct: 316 RADLKQLMVHAFIKRS 331
Score = 40.2 bits (94), Expect = 0.003
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 751 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
++F+ ++ + G GVV++ K + ++A
Sbjct: 31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMA 62
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 118 bits (297), Expect = 5e-29
Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 23/233 (9%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKME-KEKEGFPITSLREINTLLKA 418
+ E+ K L I G YG V + K + +I+A+KR++ EKE + L +++ ++++
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQL--LMDLDVVMRS 77
Query: 419 -QHPNIVT-----VREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEV-KCL 471
P IV RE +I M+ + + + S IP E+ +
Sbjct: 78 SDCPYIVQFYGALFRE-------GDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKI 130
Query: 472 MQQLLNAVAHLHDNW-ILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTL 530
+ A+ HL +N I+HRD+K SN+LL G +K+ DFG++ + + T
Sbjct: 131 TLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK-TRDAGCR 189
Query: 531 WYRSPELLLG---CKEYSTPIDMWSVGCIFAEFLCME-PLFTGKSDLEQLSRI 579
Y +PE + + Y D+WS+G E P S +QL+++
Sbjct: 190 PYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV 242
Score = 40.4 bits (95), Expect = 0.002
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 751 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ E+ K L I G YG V + K + +I+A
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMA 51
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 117 bits (294), Expect = 2e-28
Identities = 59/286 (20%), Positives = 117/286 (40%), Gaps = 35/286 (12%)
Query: 309 KAKKRKKEDASPNESERDVSPHVIMDQDVDMEIELEKDTLPPYLPAIQGCRSVEEFKCLN 368
K KKR P E+ +D+D + + + A ++ + +
Sbjct: 5 KGKKRNPGLKIPKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKA-------DDLEPIM 57
Query: 369 RIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKA-QHPNIVT-- 425
+ G YGVV + + + +I+A+KR++ + L +++ ++ P VT
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRL-LMDLDISMRTVDCPFTVTFY 116
Query: 426 ---VREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHL 482
RE ++I M+ ++ + + + K Q + + ++ A+ HL
Sbjct: 117 GALFRE-------GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 169
Query: 483 HDNW-ILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLG- 540
H ++HRD+K SN+L++ G +K+ DFG++ + T Y +PE +
Sbjct: 170 HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK-TIDAGCKPYMAPERINPE 228
Query: 541 --CKEYSTPIDMWSVG-----CIFAEFLCMEPLFTGKSDLEQLSRI 579
K YS D+WS+G F P + + +QL ++
Sbjct: 229 LNQKGYSVKSDIWSLGITMIELAILRF----PYDSWGTPFQQLKQV 270
Score = 38.1 bits (89), Expect = 0.011
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 751 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
++ + + + G YGVV + + + +I+A
Sbjct: 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMA 80
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 115 bits (289), Expect = 2e-28
Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 14/219 (6%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ RI G++G VY+ K VA+K L + E+ L K +H
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 422 NIVTVREIVVGSNMD-KIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVA 480
NI+ +G + ++ IV + E SL + + + F ++ + +Q +
Sbjct: 81 NILLF----MGYSTAPQLAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMD 134
Query: 481 HLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE--YGSPLKHYTPIVVTLWYRSPELL 538
+LH I+HRDLK++N+ L +K+GDFGLA E S + + ++ + +PE++
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 539 LG--CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQ 575
YS D+++ G + E + + ++ ++ +Q
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 115 bits (289), Expect = 4e-28
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 369 RIEEGTYGVVYRAKDKRTDEIVALKRLKME-KEKEGFPITSLREINTLLKAQHPNIVTVR 427
+ G G VY A+D + IVALK + F RE T + Q P++V +
Sbjct: 41 LVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIH 100
Query: 428 EIVVGSNMDKIFIVMDYVE-HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNW 486
+ G ++++ M + D+ +++ ++ P +++Q+ +A+ H
Sbjct: 101 D--FGEIDGQLYVDMRLINGVDLAAMLR----RQGPLAPPRAVAIVRQIGSALDAAHAAG 154
Query: 487 ILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVV-TLWYRSPELLLGCKEYS 545
HRD+K N+L+S + DFG+A V TL+Y +PE ++
Sbjct: 155 ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSE--SHA 212
Query: 546 TP-IDMWSVGCIFAEFLCMEPLFTGKS 571
T D++++ C+ E L P + G
Sbjct: 213 TYRADIYALTCVLYECLTGSPPYQGDQ 239
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 115 bits (289), Expect = 4e-28
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 14/213 (6%)
Query: 367 LNRIEEGTYGVVYRAKDKRTDEIVALKRLKME-KEKEGFPITSLREINTLLKAQHPNIVT 425
+ G V+ A+D R VA+K L+ + F + RE HP IV
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 426 VREI--VVGSNMDKIFIVMDYVE-HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHL 482
V + +IVM+YV+ ++ ++ + P ++ A+
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADACQALNFS 132
Query: 483 HDNWILHRDLKTSNLLLSHRGILKVGDFGLAR---EYGSPLKHYTPIVVTLWYRSPELLL 539
H N I+HRD+K +N+++S +KV DFG+AR + G+ + ++ T Y SPE
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 540 GCKEYSTP-IDMWSVGCIFAEFLCMEPLFTGKS 571
G + D++S+GC+ E L EP FTG S
Sbjct: 193 G--DSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 114 bits (288), Expect = 7e-28
Identities = 49/204 (24%), Positives = 107/204 (52%), Gaps = 17/204 (8%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKA-QH 420
F+ + + GTYG VY+ + +T ++ A+K + + ++E +EIN L K H
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK---QEINMLKKYSHH 80
Query: 421 PNIVT-----VREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIP-GEVKCLMQQ 474
NI T +++ G + D++++VM++ S+ + +++ K + + + ++
Sbjct: 81 RNIATYYGAFIKKNPPGMD-DQLWLVMEFCG--AGSVTDLIKNTKGNTLKEEWIAYICRE 137
Query: 475 LLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRS 534
+L ++HLH + ++HRD+K N+LL+ +K+ DFG++ + + + T ++ +
Sbjct: 138 ILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMA 197
Query: 535 PELLLGCKE----YSTPIDMWSVG 554
PE++ + Y D+WS+G
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLG 221
Score = 42.4 bits (100), Expect = 6e-04
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
F+ + + GTYG VY+ + +T ++ A
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAA 53
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 113 bits (286), Expect = 8e-28
Identities = 45/217 (20%), Positives = 95/217 (43%), Gaps = 25/217 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKM--EKEKEGFPITSLREINTLLKAQ 419
+ + +G +G + + T E++ +K L E+ + F L+E+ + +
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTF----LKEVKVMRCLE 65
Query: 420 HPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
HPN++ + I V ++ + +Y++ +L ++S + + + + + +
Sbjct: 66 HPNVL--KFIGVLYKDKRLNFITEYIKGG--TLRGIIKSMDSQYPWSQRVSFAKDIASGM 121
Query: 480 AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREY--------------GSPLKHYTP 525
A+LH I+HRDL + N L+ + V DFGLAR K
Sbjct: 122 AYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT 181
Query: 526 IVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLC 562
+V ++ +PE++ G + Y +D++S G + E +
Sbjct: 182 VVGNPYWMAPEMING-RSYDEKVDVFSFGIVLCEIIG 217
Score = 30.8 bits (70), Expect = 2.5
Identities = 4/30 (13%), Positives = 12/30 (40%)
Query: 753 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ + +G +G + + T E++
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMV 39
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 114 bits (287), Expect = 8e-28
Identities = 55/234 (23%), Positives = 106/234 (45%), Gaps = 28/234 (11%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFP-ITSLREINTLLKA 418
+ + + L + GT G V++ + ++T ++A+K+++ KE I L +++ +LK+
Sbjct: 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRI--LMDLDVVLKS 80
Query: 419 -QHPNIVT-----VREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEV-KCL 471
P IV + +FI M+ M + E ++ + Q IP + +
Sbjct: 81 HDCPYIVQCFGTFITN-------TDVFIAMEL----MGTCAEKLKKRMQGPIPERILGKM 129
Query: 472 MQQLLNAVAHLHDNW-ILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTL 530
++ A+ +L + ++HRD+K SN+LL RG +K+ DFG++
Sbjct: 130 TVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK-DRSAGCA 188
Query: 531 WYRSPELLLGCKE----YSTPIDMWSVGCIFAEFLCME-PLFTGKSDLEQLSRI 579
Y +PE + Y D+WS+G E + P K+D E L+++
Sbjct: 189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV 242
Score = 39.3 bits (92), Expect = 0.005
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 751 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ + + L + GT G V++ + ++T ++A
Sbjct: 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIA 54
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 118 bits (296), Expect = 2e-27
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 369 RIEEGTYGVVYRAKDKRTDE-IVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTVR 427
I G G +Y A D+ + V LK L + ++ E L + HP+IV +
Sbjct: 87 CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD-AEAQAMAMAERQFLAEVVHPSIVQIF 145
Query: 428 EIVVGSNMDKI---FIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHD 484
V ++ +IVM+YV +SL + Q E + ++L A+++LH
Sbjct: 146 NFVEHTDRHGDPVGYIVMEYVGG--QSLKRSKG---QKLPVAEAIAYLLEILPALSYLHS 200
Query: 485 NWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEY 544
+++ DLK N++L+ + K+ D G + + + T +++PE++
Sbjct: 201 IGLVYNDLKPENIMLTEEQL-KLIDLGAVS----RINSFGYLYGTPGFQAPEIVRT--GP 253
Query: 545 STPIDMWSVGCIFAEFLCMEPLFTGKS 571
+ D+++VG A P G+
Sbjct: 254 TVATDIYTVGRTLAALTLDLPTRNGRY 280
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 112 bits (282), Expect = 3e-27
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 15/219 (6%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ +I G++G V+RA+ +D VA+K L + LRE+ + + +HP
Sbjct: 37 CDLNIKEKIGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 422 NIVTVREIVVGSNMD--KIFIVMDYVEHDMKSLMETMRSKKQVF-IPGEVKCLM-QQLLN 477
NIV +G+ + IV +Y+ SL + + + M +
Sbjct: 95 NIVLF----MGAVTQPPNLSIVTEYLSR--GSLYRLLHKSGAREQLDERRRLSMAYDVAK 148
Query: 478 AVAHLHDN--WILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSP 535
+ +LH+ I+HR+LK+ NLL+ + +KV DFGL+R S T + +P
Sbjct: 149 GMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAP 208
Query: 536 ELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLE 574
E+L + + D++S G I E ++ + + +
Sbjct: 209 EVLRD-EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ 246
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 108 bits (273), Expect = 2e-26
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITS--LREINTLLKAQ 419
E I G +G VYRA + VA+K + + +++ +E +
Sbjct: 7 AELTLEEIIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAMLK 64
Query: 420 HPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLM-QQLLNA 478
HPNI+ + V + +VM++ L + K+ IP ++ Q+
Sbjct: 65 HPNIIAL--RGVCLKEPNLCLVMEFARGG--PLNRVLSGKR---IPPDILVNWAVQIARG 117
Query: 479 VAHLHDN---WILHRDLKTSNLLLS--------HRGILKVGDFGLAREYGSPLKHYTPIV 527
+ +LHD I+HRDLK+SN+L+ ILK+ DFGLARE+
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR--TTKMSAA 175
Query: 528 VTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLE 574
+ +PE++ +S D+WS G + E L E F G L
Sbjct: 176 GAYAWMAPEVIRA-SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA 221
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 110 bits (276), Expect = 2e-26
Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
E+ + I +G +G VY + VA++ + +E++ E RE+ + +H
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLKAFKREVMAYRQTRHE 89
Query: 422 NIVTVREIVVGSNMD--KIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
N+V +G+ M + I+ + ++L +R K V + + + Q+++ +
Sbjct: 90 NVVLF----MGACMSPPHLAIITSLCKG--RTLYSVVRDAKIVLDVNKTRQIAQEIVKGM 143
Query: 480 AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTL---WYR--S 534
+LH ILH+DLK+ N+ + G + + DFGL G + + W +
Sbjct: 144 GYLHAKGILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLA 202
Query: 535 PELL--------LGCKEYSTPIDMWSVGCIFAEFLCMEPLFTG 569
PE++ +S D++++G I+ E E F
Sbjct: 203 PEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT 245
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 109 bits (274), Expect = 3e-26
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 12/218 (5%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
E RI G++G VY+ K VA+K LK+ E+ L K +H
Sbjct: 36 SEVMLSTRIGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHV 92
Query: 422 NIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAH 481
NI+ + N + IV + E SL + + ++ F ++ + +Q + +
Sbjct: 93 NILLFMGYMTKDN---LAIVTQWCEGS--SLYKHLHVQETKFQMFQLIDIARQTAQGMDY 147
Query: 482 LHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYR--SPELLL 539
LH I+HRD+K++N+ L +K+GDFGLA T +PE++
Sbjct: 148 LHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 540 GCKE--YSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQ 575
+S D++S G + E + E ++ ++ +Q
Sbjct: 208 MQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ 245
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 110 bits (278), Expect = 6e-26
Identities = 76/340 (22%), Positives = 129/340 (37%), Gaps = 58/340 (17%)
Query: 334 DQDVDMEIELEKDTLPPYLPAIQGCR----SVEEFKCLNRIEEGTYGVVYRAKDKRTDEI 389
D + + + L Y I R E+++ + I G +G V + K T ++
Sbjct: 37 DFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKV 96
Query: 390 VALKRLK---MEKEKEGFPITSLREINTLLKAQHPNIVTVREIVVGS--NMDKIFIVMDY 444
A+K L M K + R+I + A P +V + + + +++VM+Y
Sbjct: 97 YAMKLLSKFEMIKRSDSAFFWEERDI--MAFANSPWVVQLF----YAFQDDRYLYMVMEY 150
Query: 445 VE-HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRG 503
+ D+ +LM + +++ A+ +H +HRD+K N+LL G
Sbjct: 151 MPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 205
Query: 504 ILKVGDFGLAREYGSPLKHYTPIVV-TLWYRSPELLL---GCKEYSTPIDMWSVGCIFAE 559
LK+ DFG + V T Y SPE+L G Y D WSVG E
Sbjct: 206 HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 265
Query: 560 FLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVA 619
L + F + L + KI + L +P+
Sbjct: 266 MLVGDTPFYA----DSLVGTY-------SKIMNHKNSLT---------FPD--------- 296
Query: 620 GSILTELGYDLLCKFLTYDPVTRIT---ADEALRHDYFSE 656
+ +++ +L+C FLT D R+ +E RH +F
Sbjct: 297 DNDISKEAKNLICAFLT-DREVRLGRNGVEEIKRHLFFKN 335
Score = 29.3 bits (66), Expect = 7.0
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Query: 723 ELDQDVDMEIELEKDTLPPYLPAIQGCR----SVEEFKCLNRIEEGTYGVVYRAKDKRTD 778
+LD + + + L Y I R E+++ + I G +G V + K T
Sbjct: 35 DLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR 94
Query: 779 EIVA 782
++ A
Sbjct: 95 KVYA 98
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 109 bits (275), Expect = 8e-26
Identities = 62/305 (20%), Positives = 117/305 (38%), Gaps = 48/305 (15%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEK--EKEGFPITSLREINTLLK 417
+ + F+ L I +G++G V + T ++ A+K + +K E+ +E+ +
Sbjct: 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNV-FKELQIMQG 71
Query: 418 AQHPNIVTVREIVVGS--NMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQQ 474
+HP +V + S + + +F+V+D + D++ + + F VK + +
Sbjct: 72 LEHPFLVNLW----YSFQDEEDMFMVVDLLLGGDLRYHL----QQNVHFKEETVKLFICE 123
Query: 475 LLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRS 534
L+ A+ +L + I+HRD+K N+LL G + + DF +A + T + T Y +
Sbjct: 124 LVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT-MAGTKPYMA 182
Query: 535 PELLL--GCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWP 592
PE+ YS +D WS+G E L + +S I
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS-TSSKEIV-------HTFET 234
Query: 593 GFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRI-TADEALRH 651
P S ++ LL K L +P R +
Sbjct: 235 TVVTYP----------------------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272
Query: 652 DYFSE 656
Y ++
Sbjct: 273 PYMND 277
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 109 bits (275), Expect = 1e-25
Identities = 62/345 (17%), Positives = 120/345 (34%), Gaps = 62/345 (17%)
Query: 334 DQDVDMEIELEKDTLPPYLPAIQGCR----SVEEFKCLNRIEEGTYGVVYRAKDKRTDEI 389
+ + D L P + + ++F+ L I G + V K K+T ++
Sbjct: 29 GASELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQV 88
Query: 390 VALKRLK---MEKEKEGFPITSLREINTLLKAQHPNIVTVREIVVGS--NMDKIFIVMDY 444
A+K + M K E R++ L+ I + + + + +++VM+Y
Sbjct: 89 YAMKIMNKWDMLKRGEVSCFREERDV--LVNGDRRWITQLH----FAFQDENYLYLVMEY 142
Query: 445 V---EHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSH 501
+ L+ + + + + +++ A+ +H +HRD+K N+LL
Sbjct: 143 YVGGD-----LLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR 197
Query: 502 RGILKVGDFGLAREYGSPLKHYTPIVV-TLWYRSPELLLG------CKEYSTPIDMWSVG 554
G +++ DFG + + + + V T Y SPE+L Y D W++G
Sbjct: 198 CGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALG 257
Query: 555 CIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGL 614
E + F S E +I + P +
Sbjct: 258 VFAYEMFYGQTPFYADSTAETYGKI---VHYKEHLSLPLVDE------------------ 296
Query: 615 KTKVAGSILTELGYDLLCKFLTYDPVTRIT---ADEALRHDYFSE 656
+ E D + + L P TR+ A + H +F
Sbjct: 297 -------GVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG 333
Score = 30.4 bits (69), Expect = 3.3
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 723 ELDQDVDMEIELEKDTLPPYLPAIQGCR----SVEEFKCLNRIEEGTYGVVYRAKDKRTD 778
EL + + D L P + + ++F+ L I G + V K K+T
Sbjct: 27 ELGASELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTG 86
Query: 779 EIVA 782
++ A
Sbjct: 87 QVYA 90
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 107 bits (269), Expect = 2e-25
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 38/238 (15%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
++ + + +I +G YG V+ K + E VA+K +E F EI + +H
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEEASWF---RETEIYQTVLMRHE 91
Query: 422 NIVTVREIVVGSNMD------KIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKC-LMQQ 474
NI+ + +++ +++++ DY H+ SL + ++S + + L
Sbjct: 92 NILGF----IAADIKGTGSWTQLYLITDY--HENGSLYDYLKSTT---LDAKSMLKLAYS 142
Query: 475 LLNAVAHLHDNW--------ILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHY--- 523
++ + HLH I HRDLK+ N+L+ G + D GLA ++ S
Sbjct: 143 SVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP 202
Query: 524 -TPIVVTLWYRSPELLLG-----CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQ 575
V T Y PE+L + DM+S G I E + +
Sbjct: 203 PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 106 bits (267), Expect = 2e-25
Identities = 54/219 (24%), Positives = 89/219 (40%), Gaps = 36/219 (16%)
Query: 367 LNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHPNIVTV 426
I +G +G V+R K + E VA+K +E+ F EI + +H NI+
Sbjct: 8 QESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWF---REAEIYQTVMLRHENILGF 62
Query: 427 REIVVGSNMD------KIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVA 480
+ ++ ++++V DY EH SL + + + + L + +A
Sbjct: 63 ----IAADNKDNGTWTQLWLVSDYHEH--GSLFDYL--NRYTVTVEGMIKLALSTASGLA 114
Query: 481 HLHDNW--------ILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHY----TPIVV 528
HLH I HRDLK+ N+L+ G + D GLA + S V
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 529 TLWYRSPELLLG-----CKEYSTPIDMWSVGCIFAEFLC 562
T Y +PE+L E D++++G +F E
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 105 bits (265), Expect = 5e-25
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 28/220 (12%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ L + +G YG V+R + E VA+K EK E+ + +H
Sbjct: 8 RDITLLECVGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKS---WFRETELYNTVMLRHE 62
Query: 422 NIVTVR--EIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
NI+ ++ + +++++ Y H+M SL + + + ++ + + +
Sbjct: 63 NILGFIASDMTSRHSSTQLWLITHY--HEMGSLYDYL--QLTTLDTVSCLRIVLSIASGL 118
Query: 480 AHLHDNW--------ILHRDLKTSNLLLSHRGILKVGDFGLAREY----GSPLKHYTPIV 527
AHLH I HRDLK+ N+L+ G + D GLA + P V
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
Query: 528 VTLWYRSPELL-----LGCKEYSTPIDMWSVGCIFAEFLC 562
T Y +PE+L + C + +D+W+ G + E
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 109 bits (274), Expect = 6e-25
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 13/243 (5%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKME--KEKEGFPITSLREINTLLK 417
+ F + G +G V+ + K T ++ A K+L + K+++G+ + E L K
Sbjct: 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA-MVEKKILAK 241
Query: 418 AQHPNIVTVR---EIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQ 473
IV++ E + +VM + D++ + + F
Sbjct: 242 VHSRFIVSLAYAFE-----TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 474 QLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYR 533
Q+++ + HLH I++RDLK N+LL G +++ D GLA E + T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 534 SPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPG 593
+PELLLG +EY +D +++G E + F + + + + + +
Sbjct: 357 APELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
Query: 594 FSK 596
FS
Sbjct: 416 FSP 418
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 107 bits (269), Expect = 1e-24
Identities = 67/343 (19%), Positives = 124/343 (36%), Gaps = 60/343 (17%)
Query: 334 DQDVDMEIELEKDTLPPYLPAIQGCR----SVEEFKCLNRIEEGTYGVVYRAKDKRTDEI 389
+ + + L P + E+F+ L I G +G V K K D++
Sbjct: 42 NNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKV 101
Query: 390 VALKRLK---MEKEKEGFPITSLREINTLLKAQHPNIVTVREIVVGS--NMDKIFIVMDY 444
A+K L M K E R++ L+ I T+ + + + +++VMDY
Sbjct: 102 FAMKILNKWEMLKRAETACFREERDV--LVNGDSKWITTLH----YAFQDDNNLYLVMDY 155
Query: 445 V---EHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSH 501
+ L+ + + + + +++ A+ +H +HRD+K N+L+
Sbjct: 156 YVGGD-----LLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM 210
Query: 502 RGILKVGDFGLAREYGSPLKHYTPIVV-TLWYRSPELLLGCKE----YSTPIDMWSVGCI 556
G +++ DFG + + + V T Y SPE+L + Y D WS+G
Sbjct: 211 NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVC 270
Query: 557 FAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKT 616
E L E F E L + KI + F
Sbjct: 271 MYEMLYGETPFYA----ESLVETY-------GKIMNHKERFQ------FPTQV------- 306
Query: 617 KVAGSILTELGYDLLCKFLTYDPVTRIT---ADEALRHDYFSE 656
+ ++E DL+ + + R+ ++ +H +FS
Sbjct: 307 ----TDVSENAKDLIRRLIC-SREHRLGQNGIEDFKKHPFFSG 344
Score = 30.5 bits (69), Expect = 3.6
Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Query: 723 ELDQDVDMEIELEKDTLPPYLPAIQGCR----SVEEFKCLNRIEEGTYGVVYRAKDKRTD 778
E + + + L P + E+F+ L I G +G V K K D
Sbjct: 40 ECNNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNAD 99
Query: 779 EIVA 782
++ A
Sbjct: 100 KVFA 103
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 103 bits (260), Expect = 2e-24
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 24/206 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAK----DKRTDEIVALKRLK--MEKEKEGFPITSLREINTL 415
K L ++ +G +G V + T E+VA+K+L+ E+ F REI L
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF----EREIEIL 65
Query: 416 LKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQL 475
QH NIV + + + + ++M+Y+ + SL + ++ K+ ++ Q+
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 476 LNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYT-------PIVV 528
+ +L +HRDL T N+L+ + +K+GDFGL + + + PI
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI-- 181
Query: 529 TLWYRSPELLLGCKEYSTPIDMWSVG 554
WY +PE L K +S D+WS G
Sbjct: 182 -FWY-APESLTESK-FSVASDVWSFG 204
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 105 bits (263), Expect = 2e-24
Identities = 71/332 (21%), Positives = 130/332 (39%), Gaps = 70/332 (21%)
Query: 342 ELEKDTLPPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEK 401
+ ++D L + Q +++F + + G++G V K K + A+K L +K
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK-- 78
Query: 402 EGFPITSLREI-------NTLLKAQHPNIVTVREIVVGS--NMDKIFIVMDYV---EHDM 449
+ L++I L P +V + S + +++VM+YV E
Sbjct: 79 ----VVKLKQIEHTLNEKRILQAVNFPFLVKLE----FSFKDNSNLYMVMEYVAGGE--- 127
Query: 450 KSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGD 509
+ +R + F + Q++ +LH +++RDLK NLL+ +G ++V D
Sbjct: 128 --MFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 184
Query: 510 FGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTG 569
FG A+ + +T + T +PE++L K Y+ +D W++G + E P F
Sbjct: 185 FGFAKRVKG--RTWT-LCGTPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 570 KSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYD 629
+Q +I+ EKI G + P S + D
Sbjct: 241 ----DQPIQIY-------EKIVSGKVRFP----------------------SHFSSDLKD 267
Query: 630 LLCKFLTYDPVTRI-----TADEALRHDYFSE 656
LL L D R ++ H +F+
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 104 bits (262), Expect = 2e-24
Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 28/220 (12%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
I +G +G V+R K + E VA+K +E+ EI + +H
Sbjct: 42 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERS---WFREAEIYQTVMLRHE 96
Query: 422 NIVTVR--EIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
NI+ + ++++V DY H+ SL + + + + L + +
Sbjct: 97 NILGFIAADNKDNGTWTQLWLVSDY--HEHGSLFDYL--NRYTVTVEGMIKLALSTASGL 152
Query: 480 AHLHDNW--------ILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHY----TPIV 527
AHLH I HRDLK+ N+L+ G + D GLA + S V
Sbjct: 153 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 212
Query: 528 VTLWYRSPELLLG-----CKEYSTPIDMWSVGCIFAEFLC 562
T Y +PE+L E D++++G +F E
Sbjct: 213 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 104 bits (261), Expect = 2e-24
Identities = 76/314 (24%), Positives = 127/314 (40%), Gaps = 70/314 (22%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREI------- 412
S+++F+ L + G++G V+ + + A+K LK E + L+++
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI------VVRLKQVEHTNDER 57
Query: 413 NTLLKAQHPNIVTVREIVVGS--NMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPGE 467
L HP I+ + G+ + +IF++MDY+ E L +R K Q F
Sbjct: 58 LMLSIVTHPFIIRMW----GTFQDAQQIFMIMDYIEGGE-----LFSLLR-KSQRFPNPV 107
Query: 468 VKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIV 527
K ++ A+ +LH I++RDLK N+LL G +K+ DFG A+ YT +
Sbjct: 108 AKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD--VTYT-LC 164
Query: 528 VTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPN 587
T Y +PE++ K Y+ ID WS G + E L F + ++ +
Sbjct: 165 GTPDYIAPEVVST-KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK----TY------- 212
Query: 588 EKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRI---- 643
EKI + P E DLL + +T D R+
Sbjct: 213 EKILNAELRFP----------------------PFFNEDVKDLLSRLITRDLSQRLGNLQ 250
Query: 644 -TADEALRHDYFSE 656
++ H +F E
Sbjct: 251 NGTEDVKNHPWFKE 264
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 103 bits (258), Expect = 4e-24
Identities = 60/240 (25%), Positives = 95/240 (39%), Gaps = 32/240 (13%)
Query: 362 EEFKCLNRIEEGTYGVVYRAK----DKRTDEIVALKRLK---MEKEKEGFPITSLREINT 414
K + + EG +G V + T E VA+K LK +EI
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADL----KKEIEI 76
Query: 415 LLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQ 474
L H NIV + I + I ++M+++ SL E + K + Q
Sbjct: 77 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG--SLKEYLPKNKNKINLKQQLKYAVQ 134
Query: 475 LLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYT-------PIV 527
+ + +L +HRDL N+L+ +K+GDFGL + + ++YT P+
Sbjct: 135 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPV- 193
Query: 528 VTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFT-GKSDLEQLSRIFKTMGTP 586
WY +PE L+ K + D+WS G E L T SD ++ K +G
Sbjct: 194 --FWY-APECLMQSK-FYIASDVWSFG-----VTLHE-LLTYCDSDSSPMALFLKMIGPT 243
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 103 bits (259), Expect = 5e-24
Identities = 49/222 (22%), Positives = 82/222 (36%), Gaps = 35/222 (15%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ K L I G YG VY+ + VA+K + + + I + +H
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLD--ERPVAVKVFSFANRQN---FINEKNIYRVPLMEHD 67
Query: 422 NIV---TVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
NI E V + +VM+Y + SL + + L +
Sbjct: 68 NIARFIVGDERVTADGRMEYLLVMEYYPN--GSLXKYLS--LHTSDWVSSCRLAHSVTRG 123
Query: 479 VAHLHDNW---------ILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHY------ 523
+A+LH I HRDL + N+L+ + G + DFGL+
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 524 --TPIVVTLWYRSPELLLG------CKEYSTPIDMWSVGCIF 557
V T+ Y +PE+L G + +DM+++G I+
Sbjct: 184 AAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIY 225
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 103 bits (258), Expect = 5e-24
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAK----DKRTDEIVALKRLK--MEKEKEGFPITSLREINTL 415
K L ++ +G +G V + T E+VA+K+L+ E+ F REI L
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF----EREIEIL 96
Query: 416 LKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQL 475
QH NIV + + + + ++M+Y+ + SL + ++ K+ ++ Q+
Sbjct: 97 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 154
Query: 476 LNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYT-------PIVV 528
+ +L +HRDL T N+L+ + +K+GDFGL + ++Y PI
Sbjct: 155 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI-- 212
Query: 529 TLWYRSPELLLGCKEYSTPIDMWSVG 554
WY +PE L K +S D+WS G
Sbjct: 213 -FWY-APESLTESK-FSVASDVWSFG 235
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 102 bits (257), Expect = 6e-24
Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+ L G +G V++A+ +E VA+K ++ +K+ + + E+ +L +H
Sbjct: 24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQ-DKQSW--QNEYEVYSLPGMKHE 78
Query: 422 NIVTVR--EIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
NI+ E S ++++ + E SL + + K V E+ + + + +
Sbjct: 79 NILQFIGAEKRGTSVDVDLWLITAFHEK--GSLSDFL--KANVVSWNELCHIAETMARGL 134
Query: 480 AHLHDNW----------ILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHY--TPIV 527
A+LH++ I HRD+K+ N+LL + + DFGLA ++ + V
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV 194
Query: 528 VTLWYRSPELLLG----CKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQL 576
T Y +PE+L G ++ IDM+++G + E G D L
Sbjct: 195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML 247
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 104 bits (261), Expect = 3e-23
Identities = 50/240 (20%), Positives = 101/240 (42%), Gaps = 10/240 (4%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKME--KEKEGFPITSLREINTLLK 417
+ F+ + +G +G V + + T ++ A K+L+ + K+++G + L E L K
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA-LNEKQILEK 240
Query: 418 AQHPNIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQQLL 476
+V++ D + +V+ + D+K + F ++
Sbjct: 241 VNSRFVVSLAYAY--ETKDALCLVLTLMNGGDLK--FHIYHMGQAGFPEARAVFYAAEIC 296
Query: 477 NAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPE 536
+ LH I++RDLK N+LL G +++ D GLA V T+ Y +PE
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG-RVGTVGYMAPE 355
Query: 537 LLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSK 596
++ + Y+ D W++GC+ E + + F + + + + + E+ FS
Sbjct: 356 VVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSP 414
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 100 bits (250), Expect = 5e-23
Identities = 49/340 (14%), Positives = 95/340 (27%), Gaps = 64/340 (18%)
Query: 358 CRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREI----- 412
C E+ + +I EG +G V++ T + + ++ G + EI
Sbjct: 16 CLPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEII 75
Query: 413 --------NTLLKAQHPNIVTVRE--IVVGSNMDKIFIVMDYVEHDMKSLMET--MRSKK 460
+ + + + + V GS + D+ S +
Sbjct: 76 ISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD 135
Query: 461 QVFI--------------------PGEVKCLMQQLLNAVAHLHDNW-ILHRDLKTSNLLL 499
Q+FI K ++ QL ++A + HRDL N+LL
Sbjct: 136 QLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLL 195
Query: 500 SHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAE 559
+ K+ + P ++ Y+ +F +
Sbjct: 196 KKTSLKKLHYTLNGKSSTIPSCGLQVSIID--------------YTLSRLERDGIVVFCD 241
Query: 560 FLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTF-----AEYPNVGGL 614
E LFTG D + I++ M N W + V + + +
Sbjct: 242 VSMDEDLFTG--DGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTK 299
Query: 615 KTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYF 654
A + + L + +A + L
Sbjct: 300 CNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSL 334
Score = 39.1 bits (90), Expect = 0.007
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 749 CRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIV 781
C E+ + +I EG +G V++ T +
Sbjct: 16 CLPTEKLQRCEKIGEGVFGEVFQTIADHTPVAI 48
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 100 bits (251), Expect = 6e-23
Identities = 69/308 (22%), Positives = 122/308 (39%), Gaps = 55/308 (17%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKME---KEKEGFPITSLR-EINTL 415
++ +F L + +GT+G V ++K T A+K L+ E + E + E L
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE---VAHTVTESRVL 59
Query: 416 LKAQHPNIVTVREIVVGS--NMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQ 473
+HP + ++ + D++ VM+Y L + S+++VF +
Sbjct: 60 QNTRHPFLTALK----YAFQTHDRLCFVMEYANGG--ELFFHL-SRERVFTEERARFYGA 112
Query: 474 QLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYR 533
++++A+ +LH +++RD+K NL+L G +K+ DFGL +E S T Y
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 534 SPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPG 593
+PE+L +Y +D W +G + E +C F + I E+I
Sbjct: 173 APEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL------MEEI--- 222
Query: 594 FSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRI-----TADEA 648
+P L+ LL L DP R+ A E
Sbjct: 223 -------------RFP-----------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 258
Query: 649 LRHDYFSE 656
+ H +F
Sbjct: 259 MEHRFFLS 266
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 97.9 bits (244), Expect = 2e-22
Identities = 28/222 (12%), Positives = 54/222 (24%), Gaps = 38/222 (17%)
Query: 367 LNRIEEGTYGVVYRAKDKRTDEIVALKRLKME-KEKEGFPITSLREINTLLKAQHPNIVT 425
L ++A D D VAL + + + +L L + P +
Sbjct: 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR 95
Query: 426 VREIVVGSNMDKIFIVMDYVE-HDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHD 484
V + V +V +++ ++ + +T S P MQ L A H
Sbjct: 96 VLD--VVHTRAGGLVVAEWIRGGSLQEVADTSPS------PVGAIRAMQSLAAAADAAHR 147
Query: 485 NWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEY 544
+ S + +S G + +
Sbjct: 148 AGVALSIDHPSRVRVSIDGDVVLAYPA----TMPDANPQD-------------------- 183
Query: 545 STPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTP 586
D+ +G L L+ +
Sbjct: 184 ----DIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQ 221
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 98.2 bits (245), Expect = 3e-22
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 26/207 (12%)
Query: 362 EEFKCLNRIEEGTYGVVYRAK----DKRTDEIVALKRLK---MEKEKEGFPITSLREINT 414
K ++++ +G +G V + T +VA+K+L+ +++++ F REI
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-F----QREIQI 77
Query: 415 LLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQ 474
L IV R + G + +VM+Y+ L + ++ + + Q
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG--CLRDFLQRHRARLDASRLLLYSSQ 135
Query: 475 LLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYT-------PIV 527
+ + +L +HRDL N+L+ +K+ DFGLA+ +Y PI
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI- 194
Query: 528 VTLWYRSPELLLGCKEYSTPIDMWSVG 554
WY +PE L +S D+WS G
Sbjct: 195 --FWY-APESLSDNI-FSRQSDVWSFG 217
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 97.8 bits (244), Expect = 4e-22
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 34/240 (14%)
Query: 362 EEFKCLNRIEEGTYGVVYRAK----DKRTDEIVALKRLK---MEKEKEGFPITSLREINT 414
K + + EG +G V + T E+VA+K LK + + G+ +EI+
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGW----KQEIDI 86
Query: 415 LLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQ 474
L H +I+ + + + +VM+YV SL + + ++ QQ
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLG--SLRDYLPRHS--IGLAQLLLFAQQ 142
Query: 475 LLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYT-------PIV 527
+ +A+LH +HRDL N+LL + ++K+GDFGLA+ ++Y P+
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV- 201
Query: 528 VTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFT-GKSDLEQLSRIFKTMGTP 586
WY +PE L K + D+WS G E L T S ++ + +G
Sbjct: 202 --FWY-APECLKEYK-FYYASDVWSFG-----VTLYE-LLTHCDSSQSPPTKFLELIGIA 251
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 98.5 bits (246), Expect = 5e-22
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKA 418
E+ +I G +G V+ + + + +VA+K + K F L+E L +
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKF----LQEARILKQY 169
Query: 419 QHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
HPNIV R I V + I+IVM+ V+ + +R++ + ++
Sbjct: 170 SHPNIV--RLIGVCTQKQPIYIVMELVQGG--DFLTFLRTEGARLRVKTLLQMVGDAAAG 225
Query: 479 VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE------YGSPLKHYTPIVVTLWY 532
+ +L +HRDL N L++ + +LK+ DFG++RE S P+ W
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV---KWT 282
Query: 533 RSPELLLGCKEYSTPIDMWSVG 554
+PE L + YS+ D+WS G
Sbjct: 283 -APEALNYGR-YSSESDVWSFG 302
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 98.7 bits (246), Expect = 9e-22
Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 18/281 (6%)
Query: 300 EDKADKKEKKAKKRKKEDASPNESERDVSPHVIMDQDVDMEIELEKDTLPPYLPAIQGCR 359
E +++E + D ++ ++ D E+E P
Sbjct: 91 ETPEEREEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRV----- 145
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLR-EINTLLKA 418
++ EF+ L + +GT+G V K+K T A+K LK E + E L +
Sbjct: 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 419 QHPNIVTVREIVVGS--NMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLL 476
+HP + ++ S D++ VM+Y L + S+++VF + +++
Sbjct: 206 RHPFLTALK----YSFQTHDRLCFVMEYANGG--ELFFHL-SRERVFSEDRARFYGAEIV 258
Query: 477 NAVAHLH-DNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSP 535
+A+ +LH + +++RDLK NL+L G +K+ DFGL +E T Y +P
Sbjct: 259 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP 318
Query: 536 ELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQL 576
E+L +Y +D W +G + E +C F + D E+L
Sbjct: 319 EVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-DHEKL 357
Score = 29.3 bits (66), Expect = 6.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 751 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
++ EF+ L + +GT+G V K+K T A
Sbjct: 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYA 177
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 99.7 bits (248), Expect = 1e-21
Identities = 70/352 (19%), Positives = 127/352 (36%), Gaps = 53/352 (15%)
Query: 316 EDASPNESERDVSPHVIMDQDVDMEIELEKDTLPPYLPAIQGCR-SVEEFKCLNRIEEGT 374
E + NE R + Q E +T+ + R + +F L + +G+
Sbjct: 294 EGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGS 353
Query: 375 YGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLR-EINTL-LKAQHPNIVTVREIVVG 432
+G V ++ K TDE+ A+K LK + + + E L L + P + +
Sbjct: 354 FGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH----S 409
Query: 433 S--NMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILH 489
MD+++ VM+YV D LM + + F ++ + L I++
Sbjct: 410 CFQTMDRLYFVMEYVNGGD---LMYHI-QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIY 465
Query: 490 RDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTPID 549
RDLK N++L G +K+ DFG+ +E T Y +PE++ + Y +D
Sbjct: 466 RDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAY-QPYGKSVD 524
Query: 550 MWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEYP 609
W+ G + E L + F G+ + E I + YP
Sbjct: 525 WWAFGVLLYEMLAGQAPFEGEDEDELFQSIM------EHNV----------------AYP 562
Query: 610 NVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRI-----TADEALRHDYFSE 656
+++ + +T P R+ + H +F
Sbjct: 563 -----------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603
Score = 33.8 bits (77), Expect = 0.35
Identities = 14/104 (13%), Positives = 33/104 (31%), Gaps = 5/104 (4%)
Query: 684 SPKPPSGGHNYKQLEDNEEGFHMGMMERSRAPVPGFSWGELDQDVDMEIELEKDTLPPYL 743
K G ++ E F++ + + + ++ +
Sbjct: 267 LQKAGVDGWFKLLSQEEGEYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTI 326
Query: 744 PAIQGCR-----SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+ +F L + +G++G V ++ K TDE+ A
Sbjct: 327 SKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYA 370
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 95.7 bits (239), Expect = 2e-21
Identities = 72/318 (22%), Positives = 124/318 (38%), Gaps = 78/318 (24%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKME---KEKEGFPITSLR-EINTL 415
+E+F + +G++G V+ A+ K+T++ A+K LK + + + + E L
Sbjct: 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD---VECTMVEKRVL 71
Query: 416 LKA-QHPNIVTVREIVVGS--NMDKIFIVMDYVE--------HDMKSLMETMRSKKQVFI 464
A +HP + + + + +F VM+Y+ + R+ F
Sbjct: 72 SLAWEHPFLTHMF----CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS-RAT---FY 123
Query: 465 PGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE---YGSPLK 521
E+ + LH I++RDLK N+LL G +K+ DFG+ +E +
Sbjct: 124 AAEIIL-------GLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 176
Query: 522 HY--TPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRI 579
+ TP Y +PE+LLG ++Y+ +D WS G + E L + F G+ + E I
Sbjct: 177 TFCGTPD-----YIAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
Query: 580 FKTMGTPNEKIWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDP 639
+ YP L + DLL K +P
Sbjct: 231 R------MDNP----------------FYP-----------RWLEKEAKDLLVKLFVREP 257
Query: 640 VTRITADEALR-HDYFSE 656
R+ +R H F E
Sbjct: 258 EKRLGVRGDIRQHPLFRE 275
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 95.0 bits (237), Expect = 4e-21
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 27/206 (13%)
Query: 362 EEFKCLNRIEEGTYGVVYRA----KDKRTDEIVALKRLK---MEKEKEGFPITSLREINT 414
EFK + + G +G VY+ + ++ VA+K L+ K + L E
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI----LDEAYV 70
Query: 415 LLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQ 474
+ +P++ + I + + ++ + L++ +R K + Q
Sbjct: 71 MASVDNPHVCRLLGICLT---STVQLITQLMPFG--CLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 475 LLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYT------PIVV 528
+ + +L D ++HRDL N+L+ +K+ DFGLA+ G+ K Y PI
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK- 184
Query: 529 TLWYRSPELLLGCKEYSTPIDMWSVG 554
W + E +L Y+ D+WS G
Sbjct: 185 --WM-ALESILHRI-YTHQSDVWSYG 206
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 94.5 bits (236), Expect = 4e-21
Identities = 61/235 (25%), Positives = 116/235 (49%), Gaps = 27/235 (11%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAK---DKRTDEIVALKRLK----MEKEKEGFPITSLR-E 411
E F+ L + +G YG V++ + T +I A+K LK + K+ + E
Sbjct: 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD---TAHTKAE 71
Query: 412 INTLLKAQHPNIVTVREIVVGS--NMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPG 466
N L + +HP IV + + K++++++Y+ E L + ++ +F+
Sbjct: 72 RNILEEVKHPFIVDLI----YAFQTGGKLYLILEYLSGGE-----LFMQL-EREGIFMED 121
Query: 467 EVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPI 526
+ ++ A+ HLH I++RDLK N++L+H+G +K+ DFGL +E
Sbjct: 122 TACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF 181
Query: 527 VVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFK 581
T+ Y +PE+L+ ++ +D WS+G + + L P FTG++ + + +I K
Sbjct: 182 CGTIEYMAPEILMR-SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 94.6 bits (236), Expect = 6e-21
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 18/223 (8%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLR-EINTLLKA 418
+++F L I G+Y V + K+TD I A+K +K E + I ++ E + +A
Sbjct: 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 66
Query: 419 -QHPNIVTVREIVVGS--NMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPGEVKCLM 472
HP +V + ++F V++YV + LM M +++ +
Sbjct: 67 SNHPFLVGLH----SCFQTESRLFFVIEYVNGGD-----LMFHM-QRQRKLPEEHARFYS 116
Query: 473 QQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWY 532
++ A+ +LH+ I++RDLK N+LL G +K+ D+G+ +E P + T Y
Sbjct: 117 AEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNY 176
Query: 533 RSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQ 575
+PE+L G ++Y +D W++G + E + F +
Sbjct: 177 IAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 218
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 93.8 bits (234), Expect = 7e-21
Identities = 74/310 (23%), Positives = 130/310 (41%), Gaps = 57/310 (18%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAK---DKRTDEIVALKRLKMEKEKEGFPITSLREINTLL 416
+F+ L + +G++G V+ K ++ A+K LK K + + E + L+
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 417 KAQHPNIVTVREIVVGS--NMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPGEVKCL 471
+ HP IV + + K+++++D++ + L T SK+ +F +VK
Sbjct: 82 EVNHPFIVKLH----YAFQTEGKLYLILDFLRGGD-----LF-TRLSKEVMFTEEDVKFY 131
Query: 472 MQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLW 531
+ +L A+ HLH I++RDLK N+LL G +K+ DFGL++E K T+
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 191
Query: 532 YRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIW 591
Y +PE++ + ++ D WS G + E L F GK E ++ I K
Sbjct: 192 YMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK---------- 240
Query: 592 PGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRI-----TAD 646
K+ ++ L+ LL +P R+ +
Sbjct: 241 ---------AKLGMPQF--------------LSPEAQSLLRMLFKRNPANRLGAGPDGVE 277
Query: 647 EALRHDYFSE 656
E RH +FS
Sbjct: 278 EIKRHSFFST 287
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 93.8 bits (234), Expect = 1e-20
Identities = 61/307 (19%), Positives = 113/307 (36%), Gaps = 52/307 (16%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLR-EINTLLKA 418
+ +F L + +G++G V ++ K TDE+ A+K LK + + + E L
Sbjct: 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 419 -QHPNIVTVREIVVGS--NMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQQ 474
+ P + + MD+++ VM+YV D LM + + F +
Sbjct: 78 GKPPFLTQLH----SCFQTMDRLYFVMEYVNGGD---LMYHI-QQVGRFKEPHAVFYAAE 129
Query: 475 LLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRS 534
+ + L I++RDLK N++L G +K+ DFG+ +E T Y +
Sbjct: 130 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIA 189
Query: 535 PELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGF 594
PE++ + Y +D W+ G + E L + F G+ + E I +
Sbjct: 190 PEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM------EHNV---- 238
Query: 595 SKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRI-----TADEAL 649
YP +++ + +T P R+ +
Sbjct: 239 ------------AYP-----------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 275
Query: 650 RHDYFSE 656
H +F
Sbjct: 276 EHAFFRY 282
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 91.9 bits (229), Expect = 1e-20
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 24/201 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKA 418
E + I G +G+V+ D+ VA+K ++ M +E F + E ++K
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED--F----IEEAEVMMKL 60
Query: 419 QHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
HP +V + V I +V +++EH L + +R+++ +F + + +
Sbjct: 61 SHPKLV--QLYGVCLEQAPICLVTEFMEHG--CLSDYLRTQRGLFAAETLLGMCLDVCEG 116
Query: 479 VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR-----EYGSPLKHYTPIVVTLWYR 533
+A+L + ++HRDL N L+ ++KV DFG+ R +Y S P+ W
Sbjct: 117 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK---WA- 172
Query: 534 SPELLLGCKEYSTPIDMWSVG 554
SPE+ + YS+ D+WS G
Sbjct: 173 SPEVFSFSR-YSSKSDVWSFG 192
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 93.5 bits (233), Expect = 1e-20
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 18/229 (7%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLR-EINTLLKA 418
++ F+ + + +G++G V A+ K T ++ A+K LK + + + E L A
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 419 -QHPNIVTVREIVVGS--NMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPGEVKCLM 472
HP + + D++F VM++V + LM + K + F +
Sbjct: 81 RNHPFLTQLF----CCFQTPDRLFFVMEFVNGGD-----LMFHI-QKSRRFDEARARFYA 130
Query: 473 QQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWY 532
++++A+ LHD I++RDLK N+LL H G K+ DFG+ +E T Y
Sbjct: 131 AEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDY 190
Query: 533 RSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFK 581
+PE+L Y +D W++G + E LC F +++ + I
Sbjct: 191 IAPEILQE-MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 94.0 bits (234), Expect = 2e-20
Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 19/264 (7%)
Query: 320 PNESERDVSPHVIMDQDVDMEIELEKDTLPPYLPAIQGCR-SVEEFKCLNRIEEGTYGVV 378
++ + + ++ + IE EK+ + +++F L I G+Y V
Sbjct: 9 HHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKV 68
Query: 379 YRAKDKRTDEIVALKRLKMEKEKEGFPITSLR-EINTLLKA-QHPNIVTVREIVVGS--N 434
+ K+TD I A++ +K E + I ++ E + +A HP +V +
Sbjct: 69 LLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH----SCFQT 124
Query: 435 MDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRD 491
++F V++YV + LM M +++ + ++ A+ +LH+ I++RD
Sbjct: 125 ESRLFFVIEYVNGGD-----LMFHM-QRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 178
Query: 492 LKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGCKEYSTPIDMW 551
LK N+LL G +K+ D+G+ +E P + T Y +PE+L G ++Y +D W
Sbjct: 179 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG-EDYGFSVDWW 237
Query: 552 SVGCIFAEFLCMEPLFTGKSDLEQ 575
++G + E + F +
Sbjct: 238 ALGVLMFEMMAGRSPFDIVGSSDN 261
Score = 30.8 bits (70), Expect = 2.5
Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Query: 715 PVPGFSWGELDQDVDMEIELEKDTLPPYLPAIQGCR-SVEEFKCLNRIEEGTYGVVYRAK 773
+P + IE EK+ + +++F L I G+Y V +
Sbjct: 13 DIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVR 72
Query: 774 DKRTDEIVA 782
K+TD I A
Sbjct: 73 LKKTDRIYA 81
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 91.1 bits (227), Expect = 3e-20
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+E K L I +G +G V + VA+K +K + + F L E + + + +H
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDATAQAF----LAEASVMTQLRHS 74
Query: 422 NIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSK-KQVFIPGEVKCLMQQLLNAVA 480
N+V + V+ ++IV +Y+ SL++ +RS+ + V + + A+
Sbjct: 75 NLVQL-LGVIVEEKGGLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 131
Query: 481 HLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE-----YGS--PLKHYTPIVVTLWYR 533
+L N +HRDL N+L+S + KV DFGL +E P+K W
Sbjct: 132 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK---------WT- 181
Query: 534 SPELLLGCKEYSTPIDMWSVG 554
+PE L K +ST D+WS G
Sbjct: 182 APEALREKK-FSTKSDVWSFG 201
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 94.6 bits (235), Expect = 6e-20
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKME--KEKEGFPITSLREINTLLK 417
++ +F I G +G VY + T ++ A+K L + K K+G + L E L
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA-LNERIMLSL 245
Query: 418 ---AQHPNIVTVREIVVGS--NMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCL 471
P IV + + DK+ ++D + D+ + S+ VF +++
Sbjct: 246 VSTGDCPFIVCMS----YAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFY 297
Query: 472 MQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLW 531
+++ + H+H+ ++++RDLK +N+LL G +++ D GLA + S K + V T
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD-FSKKKPHA-SVGTHG 355
Query: 532 YRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTG--KSDLEQLSR 578
Y +PE+L Y + D +S+GC+ + L F D ++ R
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 404
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 93.3 bits (232), Expect = 7e-20
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 24/202 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKA 418
+ +++ G YG VY K+ VA+K LK ME E+ F L+E + +
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--F----LKEAAVMKEI 273
Query: 419 QHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRS-KKQVFIPGEVKCLMQQLLN 477
+HPN+V + + V + +I+ +++ + +L++ +R +Q + + Q+ +
Sbjct: 274 KHPNLV--QLLGVCTREPPFYIITEFMTYG--NLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 478 AVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR-----EYGSPLKHYTPIVVTLWY 532
A+ +L +HR+L N L+ ++KV DFGL+R Y + PI W
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWT 386
Query: 533 RSPELLLGCKEYSTPIDMWSVG 554
PE L ++S D+W+ G
Sbjct: 387 A-PESLA-YNKFSIKSDVWAFG 406
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 89.2 bits (222), Expect = 1e-19
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKA 418
EE L + G +GVV K K + VA+K +K M +++ F +E T++K
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSEDE--F----FQEAQTMMKL 60
Query: 419 QHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
HP +V + V S I+IV +Y+ + L+ +RS + P ++ + +
Sbjct: 61 SHPKLV--KFYGVCSKEYPIYIVTEYISNG--CLLNYLRSHGKGLEPSQLLEMCYDVCEG 116
Query: 479 VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR-----EYGSPLKHYTPIVVTLWYR 533
+A L + +HRDL N L+ +KV DFG+ R +Y S + P+ W
Sbjct: 117 MAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK---WS- 172
Query: 534 SPELLLGCKEYSTPIDMWSVG 554
+PE+ K YS+ D+W+ G
Sbjct: 173 APEVFHYFK-YSSKSDVWAFG 192
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 89.6 bits (223), Expect = 1e-19
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 22/201 (10%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKA 418
+ +++ G YG VY K+ VA+K LK ME E+ F L+E + +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--F----LKEAAVMKEI 66
Query: 419 QHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRS-KKQVFIPGEVKCLMQQLLN 477
+HPN+V + + V + +I+ +++ + +L++ +R +Q + + Q+ +
Sbjct: 67 KHPNLV--QLLGVCTREPPFYIITEFMTYG--NLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 478 AVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTL----WYR 533
A+ +L +HRDL N L+ ++KV DFGL+R YT W
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWT- 179
Query: 534 SPELLLGCKEYSTPIDMWSVG 554
+PE L K +S D+W+ G
Sbjct: 180 APESLAYNK-FSIKSDVWAFG 199
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 90.1 bits (224), Expect = 2e-19
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 26/206 (12%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDE---IVALKRLK---MEKEKEGFPITSLREINTL 415
I G G V + + + VA+K LK E+++ F L E + +
Sbjct: 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF----LSEASIM 104
Query: 416 LKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQL 475
+ HPNI+ R V + IV +Y+E+ SL +R+ F ++ +++ +
Sbjct: 105 GQFDHPNII--RLEGVVTRGRLAMIVTEYMEN--GSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 476 LNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE-YGSPLKHYT------PIVV 528
+ +L D +HRDL N+L+ + KV DFGL+R P YT PI
Sbjct: 161 GAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPI-- 218
Query: 529 TLWYRSPELLLGCKEYSTPIDMWSVG 554
W +PE + +S+ D+WS G
Sbjct: 219 -RWT-APEAIAFRT-FSSASDVWSFG 241
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 88.8 bits (221), Expect = 2e-19
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 24/201 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKA 418
++ L + G +GVV K + + VA+K +K M +++ F + E ++
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDE--F----IEEAKVMMNL 76
Query: 419 QHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
H +V + V + IFI+ +Y+ + L+ +R + F ++ + + + A
Sbjct: 77 SHEKLV--QLYGVCTKQRPIFIITEYMANG--CLLNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 479 VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR-----EYGSPLKHYTPIVVTLWYR 533
+ +L LHRDL N L++ +G++KV DFGL+R EY S + P+ W
Sbjct: 133 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV---RWS- 188
Query: 534 SPELLLGCKEYSTPIDMWSVG 554
PE+L+ K +S+ D+W+ G
Sbjct: 189 PPEVLMYSK-FSSKSDIWAFG 208
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 90.9 bits (226), Expect = 3e-19
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQHP 421
+E K L I +G +G V + VA+K +K + + F L E + + + +H
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDATAQAF----LAEASVMTQLRHS 246
Query: 422 NIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSK-KQVFIPGEVKCLMQQLLNAVA 480
N+V + V+ ++IV +Y+ SL++ +RS+ + V + + A+
Sbjct: 247 NLVQL-LGVIVEEKGGLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 303
Query: 481 HLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE-YGSPLKHYTPIVVTLWYRSPELLL 539
+L N +HRDL N+L+S + KV DFGL +E + P+ W +PE L
Sbjct: 304 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK---WT-APEALR 359
Query: 540 GCKEYSTPIDMWSVG 554
K +ST D+WS G
Sbjct: 360 EKK-FSTKSDVWSFG 373
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 89.7 bits (223), Expect = 3e-19
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 26/206 (12%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDE---IVALKRLK---MEKEKEGFPITSLREINTL 415
+ G +G V + K + VA+K LK EK++ F L E + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIM 100
Query: 416 LKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQL 475
+ HPNI+ R V + + IV +Y+E+ SL +R F ++ +++ +
Sbjct: 101 GQFDHPNII--RLEGVVTKSKPVMIVTEYMEN--GSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 476 LNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYT-------PIVV 528
+ + +L D +HRDL N+L++ + KV DFGL R + PI
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI-- 214
Query: 529 TLWYRSPELLLGCKEYSTPIDMWSVG 554
W SPE + K +++ D+WS G
Sbjct: 215 -RWT-SPEAIAYRK-FTSASDVWSYG 237
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 88.9 bits (221), Expect = 3e-19
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 27/206 (13%)
Query: 362 EEFKCLNRIEEGTYGVVYRA----KDKRTDEIVALKRLK---MEKEKEGFPITSLREINT 414
EFK + + G +G VY+ + ++ VA+K L+ K + L E
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI----LDEAYV 70
Query: 415 LLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQ 474
+ +P++ + I + + ++ + L++ +R K + Q
Sbjct: 71 MASVDNPHVCRLLGICLT---STVQLITQLMPFG--CLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 475 LLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYT------PIVV 528
+ + +L D ++HRDL N+L+ +K+ DFGLA+ G+ K Y PI
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK- 184
Query: 529 TLWYRSPELLLGCKEYSTPIDMWSVG 554
W + E +L + Y+ D+WS G
Sbjct: 185 --WM-ALESIL-HRIYTHQSDVWSYG 206
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 89.3 bits (222), Expect = 4e-19
Identities = 77/365 (21%), Positives = 147/365 (40%), Gaps = 67/365 (18%)
Query: 313 RKKEDASPNESERDVSPHVIMDQDVDMEIELEKDTLPPYLPAIQGCRSVEEFKCLNRIEE 372
++ +S + +Q + ++ EL L + + +E F+ L +
Sbjct: 9 EEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKV----GIENFELLKVLGT 64
Query: 373 GTYGVVYRAK---DKRTDEIVALKRLK----MEKEKEGFPITSLREINTLLKAQH-PNIV 424
G YG V+ + T ++ A+K LK ++K K + R++ L + P +V
Sbjct: 65 GAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV--LEHIRQSPFLV 122
Query: 425 TVREIVVGS--NMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV 479
T+ + K+ +++DY+ E L + +++ F EV+ + +++ A+
Sbjct: 123 TLH----YAFQTETKLHLILDYINGGE-----LFTHLS-QRERFTEHEVQIYVGEIVLAL 172
Query: 480 AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE--YGSPLKHYTPIVVTLWYRSPEL 537
HLH I++RD+K N+LL G + + DFGL++E + Y T+ Y +P++
Sbjct: 173 EHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-FCGTIEYMAPDI 231
Query: 538 LLGCKE-YSTPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSK 596
+ G + +D WS+G + E L FT + + I +I
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS-------RRILKSEPP 284
Query: 597 LPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRI-----TADEALRH 651
P ++ L DL+ + L DP R+ ADE H
Sbjct: 285 YP----------------------QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322
Query: 652 DYFSE 656
+F +
Sbjct: 323 LFFQK 327
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 88.1 bits (219), Expect = 4e-19
Identities = 38/217 (17%), Positives = 75/217 (34%), Gaps = 43/217 (19%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEI-------VALKRLK---MEKEKEGFPITSLRE 411
E+ + +GT+ +++ + + V LK L + F
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES-F----FEA 62
Query: 412 INTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCL 471
+ + K H ++V V D+ +V ++V+ SL ++ K +
Sbjct: 63 ASMMSKLSHKHLV--LNYGVCVCGDENILVQEFVKFG--SLDTYLKKNKNCINILWKLEV 118
Query: 472 MQQLLNAVAHLHDNWILHRDLKTSNLLLSHRG--------ILKVGDFGLARE------YG 517
+QL A+ L +N ++H ++ N+LL +K+ D G++
Sbjct: 119 AKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
Query: 518 SPLKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVG 554
+ W PE + K + D WS G
Sbjct: 179 ERIP---------WV-PPECIENPKNLNLATDKWSFG 205
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 88.9 bits (221), Expect = 4e-19
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 27/207 (13%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEI----VALKRLK---MEKEKEGFPITSLREINT 414
I G +G VY+ K + VA+K LK EK++ F L E
Sbjct: 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDF----LGEAGI 99
Query: 415 LLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQ 474
+ + H NI+ R V S + I+ +Y+E+ +L + +R K F ++ +++
Sbjct: 100 MGQFSHHNII--RLEGVISKYKPMMIITEYMEN--GALDKFLREKDGEFSVLQLVGMLRG 155
Query: 475 LLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYT-------PIV 527
+ + +L + +HRDL N+L++ + KV DFGL+R + PI
Sbjct: 156 IAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPI- 214
Query: 528 VTLWYRSPELLLGCKEYSTPIDMWSVG 554
W +PE + K +++ D+WS G
Sbjct: 215 --RWT-APEAISYRK-FTSASDVWSFG 237
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 88.9 bits (221), Expect = 6e-19
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREI------- 412
+F L I +G++G V A+ K + A+K L+ K+ I +E
Sbjct: 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQ--KKA----ILKKKEEKHIMSER 89
Query: 413 NTLLKA-QHPNIVTVREIVVGS--NMDKIFIVMDYV---EHDMKSLMETMRSKKQVFIPG 466
N LLK +HP +V + S DK++ V+DY+ E L + +++ F+
Sbjct: 90 NVLLKNVKHPFLVGLH----FSFQTADKLYFVLDYINGGE-----LFYHL-QRERCFLEP 139
Query: 467 EVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPI 526
+ ++ +A+ +LH I++RDLK N+LL +G + + DFGL +E +
Sbjct: 140 RARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF 199
Query: 527 VVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGK 570
T Y +PE+L + Y +D W +G + E L P F +
Sbjct: 200 CGTPEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 86.9 bits (216), Expect = 8e-19
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 26/195 (13%)
Query: 372 EGTYGVVYRAKDKRTDEI--VALKRLK---MEKEKEGFPITSLREINTLLKAQHPNIVTV 426
G +G V + + + VA+K LK + + E +RE + + +P IV +
Sbjct: 20 CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEM----MREAQIMHQLDNPYIVRL 75
Query: 427 REIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNW 486
+ + + +VM+ L + + K++ V L+ Q+ + +L +
Sbjct: 76 IGVCQA---EALMLVMEMAGGG--PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 487 ILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYT-------PIVVTLWYRSPELLL 539
+HRDL N+LL +R K+ DFGL++ G+ +YT P+ WY +PE +
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL---KWY-APECIN 186
Query: 540 GCKEYSTPIDMWSVG 554
K +S+ D+WS G
Sbjct: 187 FRK-FSSRSDVWSYG 200
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 86.9 bits (216), Expect = 9e-19
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 29/208 (13%)
Query: 362 EEFKCLNRIEEGTYGVVYRA--KDKRTDEI-VALKRLKM-----EKEKEGFPITSLREIN 413
++ + L ++ +G++GVV R + VA+K LK + + F +RE+N
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF----IREVN 73
Query: 414 TLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQ 473
+ H N++ + +V+ + +V + SL++ +R + F+ G +
Sbjct: 74 AMHSLDHRNLIRLYGVVLT---PPMKMVTELAPLG--SLLDRLRKHQGHFLLGTLSRYAV 128
Query: 474 QLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYT-------PI 526
Q+ + +L +HRDL NLLL+ R ++K+GDFGL R HY P
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 188
Query: 527 VVTLWYRSPELLLGCKEYSTPIDMWSVG 554
W +PE L +S D W G
Sbjct: 189 A---WC-APESLKTRT-FSHASDTWMFG 211
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 86.1 bits (214), Expect = 1e-18
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEI---VALKRLK---MEKEKEGFPITSLREINTL 415
E + I EG +G V++ + VA+K K + +E F L+E T+
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF----LQEALTM 70
Query: 416 LKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQL 475
+ HP+IV + ++ + ++I+M+ L ++ +K + QL
Sbjct: 71 RQFDHPHIVKLIGVITEN---PVWIIMELCTLG--ELRSFLQVRKYSLDLASLILYAYQL 125
Query: 476 LNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR-----EYGSPLKHYTPIVVTL 530
A+A+L +HRD+ N+L+S +K+GDFGL+R Y K PI
Sbjct: 126 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---K 182
Query: 531 WYRSPELLLGCKEYSTPIDMWSVG 554
W +PE + + +++ D+W G
Sbjct: 183 WM-APESIN-FRRFTSASDVWMFG 204
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 86.1 bits (214), Expect = 2e-18
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRA--KDKRTDEI-VALKRLK---MEKEKEGFPITSLREINTL 415
E+ + EG +G VY + + ++I VA+K K KE F + E +
Sbjct: 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKF----MSEAVIM 67
Query: 416 LKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQL 475
HP+IV + I+ +I+M+ + L + K + Q+
Sbjct: 68 KNLDHPHIVKLIGIIEEEP---TWIIMELYPY--GELGHYLERNKNSLKVLTLVLYSLQI 122
Query: 476 LNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTL----W 531
A+A+L +HRD+ N+L++ +K+GDFGL+R + Y VT W
Sbjct: 123 CKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED--EDYYKASVTRLPIKW 180
Query: 532 YRSPELLLGCKEYSTPIDMWSVG 554
SPE + + ++T D+W
Sbjct: 181 M-SPESINFRR-FTTASDVWMFA 201
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 88.7 bits (220), Expect = 2e-18
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKA 418
E + ++ +G +G V+ T VA+K LK M E F L+E + K
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA--F----LQEAQVMKKL 236
Query: 419 QHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKK-QVFIPGEVKCLMQQLLN 477
+H +V + +V + I+IV +Y+ SL++ ++ + + ++ + Q+ +
Sbjct: 237 RHEKLVQLYAVVSE---EPIYIVTEYMSKG--SLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 478 AVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR-----EYGSPLKHYTPIVVTLWY 532
+A++ +HRDL+ +N+L+ + KV DFGLAR EY + PI W
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWT 348
Query: 533 RSPELLLGCKEYSTPIDMWSVGCIFAE 559
+PE L ++ D+WS G + E
Sbjct: 349 -APEAAL-YGRFTIKSDVWSFGILLTE 373
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 88.2 bits (219), Expect = 2e-18
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 20/199 (10%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEK-EKEGFPITSLREINTLLKAQH 420
E K ++ G +G V+ A + + VA+K +K E F L E N + QH
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAF----LAEANVMKTLQH 242
Query: 421 PNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRS-KKQVFIPGEVKCLMQQLLNAV 479
+V + +V + I+I+ +++ SL++ ++S + ++ Q+ +
Sbjct: 243 DKLVKLHAVVTK---EPIYIITEFMAKG--SLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 297
Query: 480 AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTL----WYRSP 535
A + +HRDL+ +N+L+S + K+ DFGLAR YT W +P
Sbjct: 298 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED--NEYTAREGAKFPIKWT-AP 354
Query: 536 ELLLGCKEYSTPIDMWSVG 554
E + ++ D+WS G
Sbjct: 355 EAINFGS-FTIKSDVWSFG 372
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 88.1 bits (218), Expect = 5e-18
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 26/198 (13%)
Query: 369 RIEEGTYGVVYRA--KDKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKAQHPNI 423
+ G +G V + + ++ VA+K LK + + E +RE + + +P I
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEM----MREAQIMHQLDNPYI 398
Query: 424 VTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLH 483
V + + + +VM+ L + + K++ V L+ Q+ + +L
Sbjct: 399 VRLIGVCQAEAL---MLVMEMAGGG--PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE 453
Query: 484 DNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYT-------PIVVTLWYRSPE 536
+ +HR+L N+LL +R K+ DFGL++ G+ +YT P+ WY +PE
Sbjct: 454 EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL---KWY-APE 509
Query: 537 LLLGCKEYSTPIDMWSVG 554
+ +++S+ D+WS G
Sbjct: 510 CIN-FRKFSSRSDVWSYG 526
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 84.2 bits (209), Expect = 7e-18
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKA 418
E K + R+ G +G V+ + VA+K LK M + F L E N + +
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--F----LAEANLMKQL 65
Query: 419 QHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKK-QVFIPGEVKCLMQQLLN 477
QH +V + +V + I+I+ +Y+E+ SL++ +++ ++ + Q+
Sbjct: 66 QHQRLVRLYAVVTQ---EPIYIITEYMENG--SLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 478 AVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTL----WYR 533
+A + + +HRDL+ +N+L+S K+ DFGLAR YT W
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED--NEYTAREGAKFPIKWT- 177
Query: 534 SPELLLGCKEYSTPIDMWSVG 554
+PE + ++ D+WS G
Sbjct: 178 APEAINYGT-FTIKSDVWSFG 197
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 84.7 bits (210), Expect = 1e-17
Identities = 66/274 (24%), Positives = 111/274 (40%), Gaps = 43/274 (15%)
Query: 364 FKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQH-PN 422
F+ +I G +G + K+ T+E VA+K +E K P E +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK---LEPMKSRAP-QLHLEYRFYKQLGSGDG 66
Query: 423 IVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHL 482
I V G +V++ + SL + + F V + QL++ + ++
Sbjct: 67 IPQVYYF--GPCGKYNAMVLELLG---PSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYV 121
Query: 483 HDNWILHRDLKTSNLLLSHRG-----ILKVGDFGLAREYGSP--LKHY-----TPIVVTL 530
H +++RD+K N L+ G ++ + DF LA+EY P KH + T
Sbjct: 122 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTA 181
Query: 531 WYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTG---------KSDLEQLSRIFK 581
Y S LG KE S D+ ++G +F FL G + E+ +I
Sbjct: 182 RYMSINTHLG-KEQSRRDDLEALGHMFMYFL------RGSLPWQGLKADTLKERYQKIGD 234
Query: 582 T-MGTPNEKI---WPGFSK-LPAVQKMTFAEYPN 610
T TP E + +P + L V+++ F E P+
Sbjct: 235 TKRATPIEVLCENFPEMATYLRYVRRLDFFEKPD 268
Score = 32.4 bits (74), Expect = 0.66
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 755 FKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
F+ +I G +G + K+ T+E VA
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVA 38
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 84.8 bits (210), Expect = 1e-17
Identities = 52/316 (16%), Positives = 100/316 (31%), Gaps = 56/316 (17%)
Query: 344 EKDTLPPYLPA--IQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEK 401
P + ++ +I G +G++Y A E A +K+E ++
Sbjct: 17 NLYFQSMPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQE 76
Query: 402 EGFPITSLREINTLLKAQHPNIVTVREIVVGSNMDKI-----------------FIVMDY 444
G E+ + + + + I F+VM+
Sbjct: 77 NG---PLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMER 133
Query: 445 VEHDMKSLMETMR--SKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHR 502
+ D++ + K V L ++L+ + ++H+N +H D+K +NLLL ++
Sbjct: 134 LGIDLQKISGQNGTFKKSTVL------QLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK 187
Query: 503 GILKV--GDFGLAREYGSPLKH-------YTPIVVTLWYRSPELLLGCKEYSTPIDMWSV 553
+V D+GL+ Y H T+ + S + G S D+ +
Sbjct: 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGV-ALSRRSDVEIL 246
Query: 554 GCIFAEFLC---------MEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSK-----LPA 599
G +LC +P+ + L L
Sbjct: 247 GYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDE--LPQSVLKWAPSGSSCCEIAQFLVC 304
Query: 600 VQKMTFAEYPNVGGLK 615
+ + E PN LK
Sbjct: 305 AHSLAYDEKPNYQALK 320
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 83.5 bits (207), Expect = 1e-17
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 22/193 (11%)
Query: 372 EGTYGVVYRA--KDKRTDEIVALKRLK---MEKE-KEGFPITSLREINTLLKAQHPNIVT 425
G +G V + + K+ + VA+K LK + K+ L E N + + +P IV
Sbjct: 27 SGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL----LAEANVMQQLDNPYIVR 82
Query: 426 VREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDN 485
+ I + +VM+ E L + ++ + V + L+ Q+ + +L ++
Sbjct: 83 MIGICEA---ESWMLVMEMAELG--PLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLEES 136
Query: 486 WILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTL----WYRSPELLLGC 541
+HRDL N+LL + K+ DFGL++ + +Y WY +PE +
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYY 195
Query: 542 KEYSTPIDMWSVG 554
K +S+ D+WS G
Sbjct: 196 K-FSSKSDVWSFG 207
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 86.5 bits (214), Expect = 1e-17
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKA 418
E + ++ +G +G V+ T VA+K LK M E F L+E + K
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA--F----LQEAQVMKKL 319
Query: 419 QHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQ---QL 475
+H +V + +V + I+IV +Y+ SL++ ++ + ++ + L+ Q+
Sbjct: 320 RHEKLVQLYAVVSE---EPIYIVTEYMSKG--SLLDFLKGETGKYLR--LPQLVDMAAQI 372
Query: 476 LNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR-----EYGSPLKHYTPIVVTL 530
+ +A++ +HRDL+ +N+L+ + KV DFGLAR EY + PI
Sbjct: 373 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---K 429
Query: 531 WYRSPELLLGCKEYSTPIDMWSVGCIFAE 559
W +PE L ++ D+WS G + E
Sbjct: 430 WT-APEAAL-YGRFTIKSDVWSFGILLTE 456
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 86.8 bits (215), Expect = 1e-17
Identities = 57/262 (21%), Positives = 110/262 (41%), Gaps = 26/262 (9%)
Query: 305 KKEKKAKKRKKEDASPNESERDVSPHVIMDQDVDMEIELEKDTLPPYLPAIQGCR-SVEE 363
+++ + N ++ V H + + D E+ + +P+ + E
Sbjct: 332 PQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRER 391
Query: 364 FKCLNRIEEGTYGVVYRA--KDKRTDEI-VALKRLK---MEKEKEGFPITSLREINTLLK 417
+ I EG +G V++ + VA+K K + +E F L+E T+ +
Sbjct: 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF----LQEALTMRQ 447
Query: 418 AQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLN 477
HP+IV + ++ + + +I+M+ L ++ +K + QL
Sbjct: 448 FDHPHIVKLIGVITENPV---WIIMELCTLG--ELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 478 AVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR-----EYGSPLKHYTPIVVTLWY 532
A+A+L +HRD+ N+L+S +K+GDFGL+R Y K PI W
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWM 559
Query: 533 RSPELLLGCKEYSTPIDMWSVG 554
+PE + + +++ D+W G
Sbjct: 560 -APESIN-FRRFTSASDVWMFG 579
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 83.1 bits (206), Expect = 3e-17
Identities = 42/206 (20%), Positives = 84/206 (40%), Gaps = 27/206 (13%)
Query: 362 EEFKCLNRIEEGTYGVVYRAK----DKRTDEIVALKRLK---MEKEKEGFPITSLREINT 414
E + L + G +G V++ + V +K ++ + + +
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV----TDHMLA 68
Query: 415 LLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQ 474
+ H +IV + + GS + +V Y+ SL++ +R + P + Q
Sbjct: 69 IGSLDHAHIVRLLGLCPGS---SLQLVTQYLPLG--SLLDHVRQHRGALGPQLLLNWGVQ 123
Query: 475 LLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR------EYGSPLKHYTPIVV 528
+ + +L ++ ++HR+L N+LL ++V DFG+A + + TPI
Sbjct: 124 IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI-- 181
Query: 529 TLWYRSPELLLGCKEYSTPIDMWSVG 554
W + E + K Y+ D+WS G
Sbjct: 182 -KWM-ALESIHFGK-YTHQSDVWSYG 204
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 82.4 bits (204), Expect = 4e-17
Identities = 63/272 (23%), Positives = 108/272 (39%), Gaps = 30/272 (11%)
Query: 364 FKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQH-PN 422
++ +I G++G +Y D E VA+K +E K P E Q
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIK---LECVKTKHP-QLHIESKIYKMMQGGVG 66
Query: 423 IVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHL 482
I T+R G+ D +VM+ + SL + + F V L Q+++ + ++
Sbjct: 67 IPTIRWC--GAEGDYNVMVMELLG---PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI 121
Query: 483 HDNWILHRDLKTSNLLL---SHRGILKVGDFGLAREYGS-------PLKHYTPIVVTLWY 532
H +HRD+K N L+ ++ + DFGLA++Y P + + T Y
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 181
Query: 533 RSPELLLGCKEYSTPIDMWSVGCIFAEFLCME---PLFTGKSDLEQLSRIFKT-MGTPNE 588
S LG E S D+ S+G + F + ++ RI + M TP E
Sbjct: 182 ASINTHLG-IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 240
Query: 589 KIWPGFSK-----LPAVQKMTFAEYPNVGGLK 615
+ G+ L + + F + P+ L+
Sbjct: 241 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLR 272
Score = 31.2 bits (71), Expect = 1.8
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 755 FKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
++ +I G++G +Y D E VA
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVA 38
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 81.9 bits (203), Expect = 7e-17
Identities = 51/220 (23%), Positives = 81/220 (36%), Gaps = 55/220 (25%)
Query: 372 EGTYGVVYRAK-----DKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLK--AQHP 421
G +G V A VA+K LK E+E + E+ +L H
Sbjct: 33 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREAL----MSELK-VLSYLGNHM 87
Query: 422 NIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMR-------SKKQVFIPGEVKCLMQ 473
NIV + + ++ +Y + D+ + + R + + E+ ++
Sbjct: 88 NIV--NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 474 QLL-------NAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPI 526
LL +A L +HRDL N+LL+H I K+ DFGLAR+ I
Sbjct: 146 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARD----------I 195
Query: 527 VVTLWYR------------SPELLLGCKEYSTPIDMWSVG 554
Y +PE + C Y+ D+WS G
Sbjct: 196 KNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYG 234
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 80.9 bits (200), Expect = 1e-16
Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 44/280 (15%)
Query: 364 FKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQH-PN 422
+K RI EG++GV++ + ++ VA+K E + P E T
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIK---FEPRRSDAP-QLRDEYRTYKLLAGCTG 67
Query: 423 IVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHL 482
I V G +V+D + SL + + + F V +Q+L V +
Sbjct: 68 IPNVYYF--GQEGLHNVLVIDLLG---PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI 122
Query: 483 HDNWILHRDLKTSNLLL-----SHRGILKVGDFGLAREYGS-------PLKHYTPIVVTL 530
H+ +++RD+K N L+ + ++ V DFG+ + Y P + + T
Sbjct: 123 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA 182
Query: 531 WYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTG---------KSDLEQLSRIFK 581
Y S LG +E S D+ ++G +F FL G ++ ++ RI +
Sbjct: 183 RYMSINTHLG-REQSRRDDLEALGHVFMYFL------RGSLPWQGLKAATNKQKYERIGE 235
Query: 582 T-MGTPNEKIWPGFSK-----LPAVQKMTFAEYPNVGGLK 615
TP ++ GF + + + + F P+ L+
Sbjct: 236 KKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ 275
Score = 30.8 bits (70), Expect = 2.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 755 FKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
+K RI EG++GV++ + ++ VA
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVA 39
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 80.8 bits (200), Expect = 1e-16
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 349 PPYLPAIQGCRSVEEFKCLNRIE---EGTYGVVYRA--KDKRTDEI-VALKRLK---MEK 399
P + A+Q ++ E G +G VY D +I A+K L
Sbjct: 9 PELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 68
Query: 400 EKEGFPITSLREINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSK 459
E F L E + HPN++++ + + +V+ Y++H L +R++
Sbjct: 69 EVSQF----LTEGIIMKDFSHPNVLSL-LGICLRSEGSPLVVLPYMKHG--DLRNFIRNE 121
Query: 460 KQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR----- 514
++ Q+ + +L +HRDL N +L + +KV DFGLAR
Sbjct: 122 THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181
Query: 515 EYGSPLKHYT---PIVVTLWYRSPELLLGCKEYSTPIDMWSVG 554
EY S P+ W + E L ++++T D+WS G
Sbjct: 182 EYYSVHNKTGAKLPV---KWM-ALESLQ-TQKFTTKSDVWSFG 219
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 80.4 bits (199), Expect = 2e-16
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 21/159 (13%)
Query: 372 EGTYGVVYRAKDKRTDE-----IVALKRLK---MEKEKEGFPITSLREINTLLKAQHPNI 423
+G++G+VY K + VA+K + +E+ F L E + + + ++
Sbjct: 35 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF----LNEASVMKEFNCHHV 90
Query: 424 VTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQQLLNAV--- 479
V R + V S ++M+ + D+KS + ++R L + + A
Sbjct: 91 V--RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 480 ---AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE 515
A+L+ N +HRDL N +++ +K+GDFG+ R+
Sbjct: 149 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 79.2 bits (196), Expect = 4e-16
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 29/227 (12%)
Query: 345 KDTLPPYLPAIQGC---RSVEEFKCLNRIEEGTYGVVYRA--KDKRTDEI-VALKRLK-- 396
+D L ++ I +G +GVVY D+ + I A+K L
Sbjct: 1 RDLDSALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI 60
Query: 397 -MEKEKEGFPITSLREINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMET 455
++ E F LRE + HPN++ + ++ +++ Y+ H L++
Sbjct: 61 TEMQQVEAF----LREGLLMRGLNHPNVLAL-IGIMLPPEGLPHVLLPYMCHG--DLLQF 113
Query: 456 MRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR- 514
+RS ++ ++ Q+ + +L + +HRDL N +L +KV DFGLAR
Sbjct: 114 IRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARD 173
Query: 515 ----EYGSPLKHYT---PIVVTLWYRSPELLLGCKEYSTPIDMWSVG 554
EY S +H P+ W + E L + ++T D+WS G
Sbjct: 174 ILDREYYSVQQHRHARLPVK---WT-ALESLQTYR-FTTKSDVWSFG 215
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 80.2 bits (198), Expect = 5e-16
Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 31/224 (13%)
Query: 349 PPYLPAIQGCRSVEEFKCLNRIE---EGTYGVVYRA--KDKRTDEI-VALKRLK---MEK 399
P + A+Q ++ E G +G VY D +I A+K L
Sbjct: 73 PELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 132
Query: 400 EKEGFPITSLREINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRS 458
E F L E + HPN++++ + + +V+ Y++H D+++ + R+
Sbjct: 133 EVSQF----LTEGIIMKDFSHPNVLSL-LGICLRSEGSPLVVLPYMKHGDLRNFI---RN 184
Query: 459 KKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR---- 514
+ ++ Q+ + L +HRDL N +L + +KV DFGLAR
Sbjct: 185 ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244
Query: 515 -EYGSPLKHYT---PIVVTLWYRSPELLLGCKEYSTPIDMWSVG 554
E+ S P+ W + E L ++++T D+WS G
Sbjct: 245 KEFDSVHNKTGAKLPV---KWM-ALESLQ-TQKFTTKSDVWSFG 283
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 78.8 bits (195), Expect = 6e-16
Identities = 43/218 (19%), Positives = 81/218 (37%), Gaps = 52/218 (23%)
Query: 372 EGTYGVVYRAK-----DKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLK-AQHPN 422
G +G V A T VA+K LK E + E+ L+ H N
Sbjct: 37 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL----MSELKILIHIGHHLN 92
Query: 423 IVTVREIVVGSNMDK-IFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCL-----MQQL 475
+V + + + +++++ + ++ + + + R++ + ++ L
Sbjct: 93 VV--NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 476 L-------NAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVV 528
+ + L +HRDL N+LLS + ++K+ DFGLAR+ I
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD----------IYK 200
Query: 529 TLWYR------------SPELLLGCKEYSTPIDMWSVG 554
Y +PE + Y+ D+WS G
Sbjct: 201 DPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFG 237
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 78.5 bits (194), Expect = 1e-15
Identities = 43/219 (19%), Positives = 84/219 (38%), Gaps = 53/219 (24%)
Query: 372 EGTYGVVYRAK-------DKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLK-AQH 420
EG +G V A+ + VA+K LK EK+ + E+ + +H
Sbjct: 45 EGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL----VSEMEMMKMIGKH 100
Query: 421 PNIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCL-----MQQ 474
NI+ + + ++++++Y +++ + R + + +
Sbjct: 101 KNII--NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 475 LL-------NAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIV 527
L+ + +L +HRDL N+L++ ++K+ DFGLAR+ I
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD----------IN 208
Query: 528 VTLWYR------------SPELLLGCKEYSTPIDMWSVG 554
+Y+ +PE L Y+ D+WS G
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFG 246
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 78.1 bits (193), Expect = 1e-15
Identities = 36/164 (21%), Positives = 71/164 (43%), Gaps = 20/164 (12%)
Query: 367 LNRIEEGTYGVVYRAKDKRTDE---IVALKRLK----MEKEKEGFPITSLREINTLLKAQ 419
+ +G +G V A+ K+ D VA+K LK + E F LRE + +
Sbjct: 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEF----LREAACMKEFD 83
Query: 420 HPNIVT----VREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQ- 473
HP++ + +++ +++H D+ + + R + F ++ L++
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL-PLQTLVRF 142
Query: 474 --QLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE 515
+ + +L +HRDL N +L+ + V DFGL+R+
Sbjct: 143 MVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRK 186
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 77.6 bits (192), Expect = 1e-15
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 36/209 (17%)
Query: 372 EGTYGVVYRAK-----DKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKAQHPNI 423
E +G VY+ + VA+K LK +E F E + QHPN+
Sbjct: 19 EDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF----RHEAMLRARLQHPNV 74
Query: 424 VTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCL-----MQQLLN 477
V + V + + ++ Y H D+ + V + + + ++
Sbjct: 75 V--CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 478 AV-------AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE-YGSPLKHYTPIVVT 529
V +L + ++H+DL T N+L+ + +K+ D GL RE Y + +Y + +
Sbjct: 133 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA--DYYKLLGNS 190
Query: 530 L----WYRSPELLLGCKEYSTPIDMWSVG 554
L W +PE ++ K +S D+WS G
Sbjct: 191 LLPIRWM-APEAIMYGK-FSIDSDIWSYG 217
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 78.6 bits (194), Expect = 1e-15
Identities = 62/318 (19%), Positives = 113/318 (35%), Gaps = 52/318 (16%)
Query: 362 EEFKCLNRIEEGTYGVVYRAKDKRT--------DEIVALK------RLKMEKE--KEGFP 405
++K + G++Y A T + +LK RL E+ +
Sbjct: 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAK 101
Query: 406 ITSLREINTLLKAQHPNIVTVREIVVGSNMDKI-FIVMDYVEHDMKSLMETMRSKKQVFI 464
+ + L I T G + DK F+V+ + ++S ++ S K V
Sbjct: 102 PLQVNKWKKLYSTPLLAIPTCMGF--GVHQDKYRFLVLPSLGRSLQSALD--VSPKHVLS 157
Query: 465 PGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLL--SHRGILKVGDFGLAREYGSPLKH 522
V + +LL+A+ LH+N +H ++ N+ + + + + +G A Y KH
Sbjct: 158 ERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKH 217
Query: 523 -------YTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPL----FTGKS 571
+P L + S +L GC S D+ S+G ++L L +
Sbjct: 218 VAYVEGSRSPHEGDLEFISMDLHKGC-GPSRRSDLQSLGYCMLKWLYGF-LPWTNCLPNT 275
Query: 572 DLEQLSRI-FKTMGTPNEKIWPGFSKLPA--------VQKMTFAEYPNVGGLKTKVAGSI 622
+ + F P + + V +T+ E P L+ +
Sbjct: 276 EDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLR-----NN 330
Query: 623 LTELGYDLLCKFLTYDPV 640
L L DL + YDP+
Sbjct: 331 LEALLQDL--RVSPYDPI 346
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 78.0 bits (193), Expect = 1e-15
Identities = 44/224 (19%), Positives = 82/224 (36%), Gaps = 58/224 (25%)
Query: 372 EGTYGVVYRAK-----DKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKAQHPNI 423
EG +G V +A + VA+K LK E L E N L + HP++
Sbjct: 33 EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDL----LSEFNVLKQVNHPHV 88
Query: 424 VTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCL----------- 471
+ + S + ++++Y ++ ++ + R ++
Sbjct: 89 I--KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 472 --MQQLL-------NAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKH 522
M L+ + +L + ++HRDL N+L++ +K+ DFGL+R+
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD------- 199
Query: 523 YTPIVVTLWYR------------SPELLLGCKEYSTPIDMWSVG 554
+ Y + E L Y+T D+WS G
Sbjct: 200 ---VYEEDSYVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFG 239
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 77.3 bits (191), Expect = 2e-15
Identities = 50/216 (23%), Positives = 83/216 (38%), Gaps = 51/216 (23%)
Query: 372 EGTYGVVYRAK-----DKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLK--AQHP 421
G +G V A + VA+K LK EKE + E+ ++ QH
Sbjct: 56 AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL----MSELK-IMSHLGQHE 110
Query: 422 NIVTVREIVVGSNMDKIFIVMDYVEH-DMKS-LMETMRSKKQVFIPGEVKCL--MQQLL- 476
NIV + ++ + ++ +Y + D+ + L R + + LL
Sbjct: 111 NIV--NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 477 ------NAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTL 530
+A L +HRD+ N+LL++ + K+GDFGLAR+ I+
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD----------IMNDS 218
Query: 531 WYR------------SPELLLGCKEYSTPIDMWSVG 554
Y +PE + C Y+ D+WS G
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYG 253
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 77.0 bits (190), Expect = 3e-15
Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 36/206 (17%)
Query: 372 EGTYGVVYRAK-----DKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKAQHPNI 423
G +G VY + + + VA+K L E+++ F L E + K H NI
Sbjct: 40 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF----LMEALIISKFNHQNI 95
Query: 424 VTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQ---QLLNAV 479
V R I V FI+M+ + D+KS + R + + L+ +
Sbjct: 96 V--RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 480 AHLHDNWILHRDLKTSNLLLSHRG---ILKVGDFGLARE------YGSPLKHYTPIVVTL 530
+L +N +HRD+ N LL+ G + K+GDFG+AR+ Y P+
Sbjct: 154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV---- 209
Query: 531 WYR--SPELLLGCKEYSTPIDMWSVG 554
+ PE + +++ D WS G
Sbjct: 210 --KWMPPEAFMEGI-FTSKTDTWSFG 232
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 77.8 bits (192), Expect = 3e-15
Identities = 47/220 (21%), Positives = 87/220 (39%), Gaps = 55/220 (25%)
Query: 372 EGTYGVVYRA------KDKRTDEI-VALKRLK---MEKEKEGFPITSLREINTLLK--AQ 419
EG +G V A KDK VA+K LK EK+ + E+ ++K +
Sbjct: 79 EGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL----ISEME-MMKMIGK 133
Query: 420 HPNIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCL-----MQ 473
H NI+ + + ++++++Y +++ ++ R + +
Sbjct: 134 HKNII--NLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 474 QLL-------NAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPI 526
L+ + +L +HRDL N+L++ ++K+ DFGLAR+ I
Sbjct: 192 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD----------I 241
Query: 527 VVTLWYR------------SPELLLGCKEYSTPIDMWSVG 554
+Y+ +PE L Y+ D+WS G
Sbjct: 242 HHIDYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFG 280
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 76.2 bits (188), Expect = 7e-15
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 25/163 (15%)
Query: 372 EGTYGVVYRAK-----DKRTDEIVALKRLK--MEKEKEGFPITSLREINTLLKAQHPNIV 424
EG +G V+ A+ ++ +VA+K LK E ++ F RE L QH +IV
Sbjct: 51 EGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDF----QREAELLTMLQHQHIV 106
Query: 425 TVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCL----MQQLLNAV 479
R V + + +V +Y+ H D+ + + ++ GE + QLL
Sbjct: 107 --RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 480 -------AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE 515
+L +HRDL T N L+ ++K+GDFG++R+
Sbjct: 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRD 207
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 76.3 bits (188), Expect = 7e-15
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 36/206 (17%)
Query: 372 EGTYGVVYRAK-----DKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKAQHPNI 423
G +G VY + + + VA+K L E+++ F L E + K H NI
Sbjct: 81 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF----LMEALIISKFNHQNI 136
Query: 424 VTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCLMQ---QLLNAV 479
V R I V FI+++ + D+KS + R + + L+ +
Sbjct: 137 V--RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 480 AHLHDNWILHRDLKTSNLLLSHRG---ILKVGDFGLARE------YGSPLKHYTPIVVTL 530
+L +N +HRD+ N LL+ G + K+GDFG+AR+ Y P+
Sbjct: 195 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV---- 250
Query: 531 WYR--SPELLLGCKEYSTPIDMWSVG 554
+ PE + +++ D WS G
Sbjct: 251 --KWMPPEAFMEGI-FTSKTDTWSFG 273
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 75.8 bits (187), Expect = 8e-15
Identities = 51/217 (23%), Positives = 84/217 (38%), Gaps = 37/217 (17%)
Query: 362 EEFKCLNRIEEGTYGVVYRA--KDKRTDEIVALKRLK---MEKEKEGFPITSLREINTLL 416
+ K + I EG +G V +A K A+KR+K + + F E+ L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF----AGELEVLC 80
Query: 417 K-AQHPNIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCL--- 471
K HPNI+ + + +++ ++Y H ++ + R +
Sbjct: 81 KLGHHPNII--NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 472 --MQQLL-------NAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR---EYGSP 519
QQLL + +L +HRDL N+L+ + K+ DFGL+R Y
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 198
Query: 520 LKHYTPIVVTLWYR--SPELLLGCKEYSTPIDMWSVG 554
P+ R + E L Y+T D+WS G
Sbjct: 199 TMGRLPV------RWMAIESLN-YSVYTTNSDVWSYG 228
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 76.2 bits (188), Expect = 8e-15
Identities = 49/225 (21%), Positives = 88/225 (39%), Gaps = 60/225 (26%)
Query: 372 EGTYGVVYRAK-----DKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLK--AQHP 421
G +G V A VA+K LK E+E + E+ ++ H
Sbjct: 55 SGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREAL----MSELK-MMTQLGSHE 109
Query: 422 NIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMR-----------SKKQVFIPGEVK 469
NIV + + + I+++ +Y + D+ + + + R ++K++ ++
Sbjct: 110 NIVNL--LGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 470 CL-MQQLL-------NAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLK 521
L + LL + L +HRDL N+L++H ++K+ DFGLAR+
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD------ 221
Query: 522 HYTPIVVTLWYR------------SPELLLGCKEYSTPIDMWSVG 554
I+ Y +PE L Y+ D+WS G
Sbjct: 222 ----IMSDSNYVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYG 261
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 75.8 bits (187), Expect = 8e-15
Identities = 35/162 (21%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 367 LNRIEEGTYGVVYRAKDKRTDEI---VALKRLKME----KEKEGFPITSLREINTLLKAQ 419
+ EG +G V K+ D VA+K +K++ +E E F L E +
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEF----LSEAACMKDFS 94
Query: 420 HPNIVTVREIVVGS---NMDKIFIVMDYVEH-DMKSLMETMR--SKKQVFIPGEVKCLMQ 473
HPN++ + + + + K +++ ++++ D+ + + R + + + M
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 474 QLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE 515
+ + +L + LHRDL N +L + V DFGL+++
Sbjct: 155 DIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKK 196
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 75.3 bits (186), Expect = 9e-15
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 372 EGTYGVVYRAK-----DKRTDEIVALKRLK--MEKEKEGFPITSLREINTLLKAQHPNIV 424
EG +G V+ A+ + +VA+K LK ++ F RE L QH +IV
Sbjct: 25 EGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDF----QREAELLTNLQHEHIV 80
Query: 425 TVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCL-----MQQLLNA 478
+ V + D + +V +Y++H D+ + + + G+ + + Q+L+
Sbjct: 81 --KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 479 V-------AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE-YGSPLKHYTPIVVTL 530
+L +HRDL T N L+ ++K+GDFG++R+ Y + +Y T+
Sbjct: 139 ASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD--YYRVGGHTM 196
Query: 531 ----WYRSPELLLGCKEYSTPIDMWSVG 554
W PE ++ K ++T D+WS G
Sbjct: 197 LPIRWM-PPESIMYRK-FTTESDVWSFG 222
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 75.9 bits (187), Expect = 1e-14
Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 53/219 (24%)
Query: 372 EGTYGVVYRA------KDKRTDEI-VALKRLK---MEKEKEGFPITSLREINTLLK-AQH 420
EG +G V A KDK + + VA+K LK EK+ + E+ + +H
Sbjct: 91 EGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL----VSEMEMMKMIGKH 146
Query: 421 PNIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCL-----MQQ 474
NI+ + + ++++++Y +++ + R + + +
Sbjct: 147 KNII--NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 475 LL-------NAVAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIV 527
L+ + +L +HRDL N+L++ ++K+ DFGLAR+ I
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD----------IN 254
Query: 528 VTLWYR------------SPELLLGCKEYSTPIDMWSVG 554
+Y+ +PE L Y+ D+WS G
Sbjct: 255 NIDYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFG 292
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 75.0 bits (185), Expect = 2e-14
Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 35/173 (20%)
Query: 372 EGTYGVVYRAK-----DKRTDEIVALKRLK---MEKEKEGFPITSLREINTLLKAQHPNI 423
EG +G V++A+ +VA+K LK + F RE + + +PNI
Sbjct: 57 EGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF----QREAALMAEFDNPNI 112
Query: 424 VTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSKKQVFIPGEVKCL----------- 471
V + + V + + ++ +Y+ + D+ + +M +
Sbjct: 113 V--KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 472 --MQQLLNAV-------AHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLARE 515
+ L A+L + +HRDL T N L+ ++K+ DFGL+R
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 74.3 bits (182), Expect = 7e-14
Identities = 67/278 (24%), Positives = 107/278 (38%), Gaps = 42/278 (15%)
Query: 364 FKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQ-HPN 422
F+ +I G++G +Y + +T+E VA+K +E K P L E Q
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LENVKTKHP-QLLYESKIYRILQGGTG 64
Query: 423 IVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHL 482
I VR G D +VMD + SL + + V L Q++N V +
Sbjct: 65 IPNVRWF--GVEGDYNVLVMDLLG---PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 119
Query: 483 HDNWILHRDLKTSNLLL---SHRGILKVGDFGLAREYGS-------PLKHYTPIVVTLWY 532
H LHRD+K N L+ + + DFGLA++Y P + + T Y
Sbjct: 120 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARY 179
Query: 533 RSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLFTGK---------SDLEQLSRIFKT- 582
S LG E S D+ S+G + FL G + ++ +I +
Sbjct: 180 ASVNTHLG-IEQSRRDDLESLGYVLMYFL------RGSLPWQGLKAGTKKQKYEKISEKK 232
Query: 583 MGTPNEKIWPGFSK-----LPAVQKMTFAEYPNVGGLK 615
+ T E + G+ + + F + P+ LK
Sbjct: 233 VATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLK 270
Score = 29.6 bits (66), Expect = 5.8
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 755 FKCLNRIEEGTYGVVYRAKDKRTDEIVA 782
F+ +I G++G +Y + +T+E VA
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVA 36
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 71.3 bits (175), Expect = 3e-13
Identities = 59/321 (18%), Positives = 108/321 (33%), Gaps = 63/321 (19%)
Query: 344 EKDTLPPYLPA--IQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKR---LKME 398
K L I + +K I +G +G +Y A D + E V +K+E
Sbjct: 15 AKRHLAEQFAVGEIITDMAAAAWKVGLPIGQGGFGCIYLA-DMNSSESVGSDAPCVVKVE 73
Query: 399 KEKEGFPITSLREINTLLKAQHPNIVTVREIVVGSNMDKI-----------------FIV 441
G E+ +A P + + F++
Sbjct: 74 PSDNG---PLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMI 130
Query: 442 MDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLLSH 501
MD D++ + E + F V L ++L+ + ++H++ +H D+K SNLLL++
Sbjct: 131 MDRFGSDLQKIYEANAKR---FSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY 187
Query: 502 RGILKV--GDFGLAREYGSP--LKHY-----TPIVVTLWYRSPELLLGCKEYSTPIDMWS 552
+ +V D+GLA Y K Y T+ + S + G S D+
Sbjct: 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGV-APSRRGDLEI 246
Query: 553 VGCIFAEFLCMEPLFTGK---------SDLEQLSRI-FKTMGTPNEKIWPGFSKLPA--- 599
+G ++L G + S+I ++ + P
Sbjct: 247 LGYCMIQWLT------GHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIA 300
Query: 600 -----VQKMTFAEYPNVGGLK 615
V+ + + E P L+
Sbjct: 301 KYMETVKLLDYTEKPLYENLR 321
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 67.6 bits (166), Expect = 3e-12
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 36/200 (18%)
Query: 359 RSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEG------FPITSLREI 412
N++ EG +GVVY K + VA+K+L + F +EI
Sbjct: 28 DERPISVGGNKMGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQF----DQEI 81
Query: 413 NTLLKAQHPNIVTVREIVVG--SNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKC 470
+ K QH N+V + +G S+ D + +V Y+ + SL ++
Sbjct: 82 KVMAKCQHENLVEL----LGFSSDGDDLCLVYVYMPN--GSL------LDRLSCLDGTPP 129
Query: 471 L-----MQQLLNA---VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLK- 521
L + A + LH+N +HRD+K++N+LL K+ DFGLAR +
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 522 HYTPIVV-TLWYRSPELLLG 540
T +V T Y +PE L G
Sbjct: 190 VMTSRIVGTTAYMAPEALRG 209
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 66.8 bits (164), Expect = 8e-12
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 41/194 (21%)
Query: 364 FKCLNRIEEGTYGVVYRA--KDKRTDEIVALKRLKMEK----EKEGFPITSLREINTLLK 417
F N + G +G VY+ D +VA+KRLK E+ E + F E+ +
Sbjct: 32 FSNKNILGRGGFGKVYKGRLADGT---LVAVKRLKEERTQGGELQ-F----QTEVEMISM 83
Query: 418 AQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIP-----------G 466
A H N++ +R + + +V Y+ + S+ +R + + P G
Sbjct: 84 AVHRNLLRLRGFCMTPT--ERLLVYPYMAN--GSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 467 EVKCLMQQLLNAVAHLHDNW---ILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKH- 522
+ L A+LHD+ I+HRD+K +N+LL VGDFGLA+ H
Sbjct: 140 SARGL--------AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 191
Query: 523 YTPIVVTLWYRSPE 536
T + T+ + +PE
Sbjct: 192 TTAVRGTIGHIAPE 205
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 65.7 bits (161), Expect = 2e-11
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 364 FKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEK---EKEGFPITSLREINTLLKAQH 420
F I G +G VY+ R VALKR E +E F EI TL +H
Sbjct: 41 FDHKFLIGHGVFGKVYKGV-LRDGAKVALKRRTPESSQGIEE-F----ETEIETLSFCRH 94
Query: 421 PNIVTVREIVVG--SNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNA 478
P++V++ +G +++ ++ Y+E+ +L + + + ++ + A
Sbjct: 95 PHLVSL----IGFCDERNEMILIYKYMEN--GNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 479 ---VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR 514
+ +LH I+HRD+K+ N+LL + K+ DFG+++
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK 187
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM,
splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo
sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Length = 437
Score = 62.6 bits (151), Expect = 3e-10
Identities = 30/170 (17%), Positives = 56/170 (32%)
Query: 22 HKSHHRSHKDKHSSHRTHGSSSSSQQDKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNK 81
+ R + S R S S ++++ S+ +S + R R R R + + K
Sbjct: 247 ERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERARRERERK 306
Query: 82 SDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYS 141
+ GG + D+ E E + +E R ER+R
Sbjct: 307 EELRGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHRSERERRR 366
Query: 142 NPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKRYRTRSRSRS 191
+ R++++ R ER E R + +D + +R
Sbjct: 367 DRDRDRDRDREHKRGERGSERGRDEARGGGGGQDNGLEGLGNDSRDMYME 416
Score = 60.2 bits (145), Expect = 2e-09
Identities = 18/189 (9%), Positives = 56/189 (29%)
Query: 3 DEDTPDSLEIKPPQASTQLHKSHHRSHKDKHSSHRTHGSSSSSQQDKSSSQHKSHHRSRH 62
+ + + + + + + S R S S+ + + + + +
Sbjct: 226 SPLPHRDRDRDRERERRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKD 285
Query: 63 RDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREID 122
RD + R +E+ R + + G + + + +
Sbjct: 286 RDRKRRSSRSRERARRERERKEELRGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEE 345
Query: 123 ELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKR 182
+ + ++ + R +R R++++ K +ER ++ + + +
Sbjct: 346 KGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGGGGGQDNGLEG 405
Query: 183 YRTRSRSRS 191
SR
Sbjct: 406 LGNDSRDMY 414
Score = 59.1 bits (142), Expect = 4e-09
Identities = 22/170 (12%), Positives = 47/170 (27%)
Query: 22 HKSHHRSHKDKHSSHRTHGSSSSSQQDKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNK 81
+ RS + S +++S + + R R R + KE R
Sbjct: 253 ERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERARRERERKEELRGG 312
Query: 82 SDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYS 141
++ +D + ++ R+ + ++ ++ R +R R
Sbjct: 313 GGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDR 372
Query: 142 NPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKRYRTRSRSRS 191
+ RE ++ ER + R R Y
Sbjct: 373 DRDREHKRGERGSERGRDEARGGGGGQDNGLEGLGNDSRDMYMESEGGDG 422
Score = 57.2 bits (137), Expect = 1e-08
Identities = 30/203 (14%), Positives = 54/203 (26%), Gaps = 4/203 (1%)
Query: 22 HKSHHRSHKDKHSSHRTHGSSSSSQQDKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNK 81
+ RS + R S ++ S + RSR R + R + R R +
Sbjct: 239 RERRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRER 298
Query: 82 SDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYS 141
+ + + R D E +E ER+R
Sbjct: 299 ARRERERKEELRGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSH 358
Query: 142 NPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKRYRTRSRSRSPINKAKNEMD 201
RE+ + R K + + ++ R + + +M
Sbjct: 359 RSERERRRDRDRDRDRD----REHKRGERGSERGRDEARGGGGGQDNGLEGLGNDSRDMY 414
Query: 202 VDEAHQRGEDDGARTPPGPAAPE 224
++ G AAPE
Sbjct: 415 MESEGGDGYLAPENGYLMEAAPE 437
Score = 53.3 bits (127), Expect = 2e-07
Identities = 30/196 (15%), Positives = 58/196 (29%), Gaps = 6/196 (3%)
Query: 22 HKSHHRSHKDKHSSHRTHGSSSSSQQDKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNK 81
+ H ++ + + + RSR RD R R ++ER R++
Sbjct: 219 YDERPGPSPLPHRDRDRDRERERRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSR 278
Query: 82 SDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYS 141
D RR R+ + R+ +
Sbjct: 279 ERSKDKDRDRKRRSSRSRERARRERERKEELRGGGGDMAEPSEAGDAPPDDGPPGELGPD 338
Query: 142 NPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRK-----RYRTRSRSRSPINKA 196
P +EK R+ +ER +E ++R +D ++ R+ R R R +
Sbjct: 339 GPDGPEEK-GRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGGGG 397
Query: 197 KNEMDVDEAHQRGEDD 212
+ ++ D
Sbjct: 398 GQDNGLEGLGNDSRDM 413
Score = 49.1 bits (116), Expect = 6e-06
Identities = 42/262 (16%), Positives = 72/262 (27%), Gaps = 16/262 (6%)
Query: 13 KPPQASTQLHKSHHRSHKDKHSSHRTHGSSSSSQQDKSSSQHKSHHRSRHRDERDRRHHH 72
+P + L + +S ++ S ER R
Sbjct: 188 RPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERERRERSRE 247
Query: 73 KEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLR 132
++KER+R +S D +S R E+R+ ER + + K ++R R
Sbjct: 248 RDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRS-----------R 296
Query: 133 ARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKRYRTRSRSRSP 192
R R+R + E + + ++ R R R R
Sbjct: 297 ERARRERERKEELRGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRERR- 355
Query: 193 INKAKNEMDVDEAHQRGEDDGARTPPGPAAPESRSRQDLEAAGLVVLTDESRSPTPQRDE 252
++ E + + D R R EA G D
Sbjct: 356 ----RSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEARGGGGGQDNGLEGLGNDSR 411
Query: 253 KPGTGQEEGELAGSAESSAGSE 274
E G+ + E+ E
Sbjct: 412 DMYMESEGGDGYLAPENGYLME 433
Score = 36.7 bits (84), Expect = 0.042
Identities = 33/277 (11%), Positives = 73/277 (26%), Gaps = 10/277 (3%)
Query: 54 HKSHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKS 113
+K + R + + + + GG RR D R + ++
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYD 220
Query: 114 KEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERV 173
+ + R R ER R + RE+ + R + R + +E + R
Sbjct: 221 ERPGPSPLPHRDRDRDRERERRERSRERDKERERRR-SRSRDRRRRSRSRDKEERRRSRE 279
Query: 174 KDVEQKRKRYRTRSRSRSPINKAKNEMDVDEAHQRGEDDGARTPPGPAAPESRSRQDLEA 233
+ ++ R R R SRSR + + + + + P
Sbjct: 280 RSKDKDRDRKRRSSRSRERARRERERKEELRGGGGDMAEPSEAGDAPPDDGPPGELG--- 336
Query: 234 AGLVVLTDESRSPTPQRDEKPGTGQEEGELAGSAESSAGSEESSQDGSEDSSQDSSSSDE 293
D P + ++ + + + + S +
Sbjct: 337 ------PDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRD 390
Query: 294 EENDENEDKADKKEKKAKKRKKEDASPNESERDVSPH 330
E + + E + + ++P
Sbjct: 391 EARGGGGGQDNGLEGLGNDSRDMYMESEGGDGYLAPE 427
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 62.2 bits (150), Expect = 8e-10
Identities = 72/502 (14%), Positives = 147/502 (29%), Gaps = 135/502 (26%)
Query: 330 HVIMDQDVDMEIELE-KDTLPPYLPAIQGCRSVEEFKCLNRIEEGTYGV--------VYR 380
H MD + E + + KD L + A V+ F C +++ + +
Sbjct: 4 HHHMDFETG-EHQYQYKDILSVFEDAF-----VDNFDC-KDVQDMPKSILSKEEIDHIIM 56
Query: 381 AKDK--RTDEIVALKRLKMEKEKEGFPITSLRE----INTLLKAQH--PNIVTV-----R 427
+KD T + K E+ + F LR + + +K + P+++T R
Sbjct: 57 SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116
Query: 428 EIVVGSN--MDKIFI-----------------VMDYVE-HDM----KSLM--ETMRSKK- 460
+ + N K + V + K+ + + S K
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176
Query: 461 QVFIPGEV------KC-----LMQQLLNAVAHLHDNWILHRDLKTSNLLLSHRGILKVGD 509
Q + ++ C +++ L + + NW D ++ L H ++
Sbjct: 177 QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR 236
Query: 510 FGLAREYGSPLKHYTPIVV-TLWYRSPELL----LGCK-----EYSTPIDMWSVGCIFAE 559
++ Y + L +V+ + + + L CK + D +
Sbjct: 237 LLKSKPYENCL-----LVLLNVQ--NAKAWNAFNLSCKILLTTRFKQVTD--FLSAATTT 287
Query: 560 FLCMEPL---FTGKSDLEQLSRIF--KTMGTPNE--KIWP----GFSKLPAVQKMTFAEY 608
+ ++ T L + + P E P ++ T+ +
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347
Query: 609 PNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDY-----FSESPLPIDP 663
+V K+ I E ++L +P E R + F S I
Sbjct: 348 KHVN--CDKLTTII--ESSLNVL------EP------AE-YRKMFDRLSVFPPS-AHIPT 389
Query: 664 AMFPT-WPAKS---------ELAHKKAAMASPKPPSGG-HN----YKQLEDNEEGFHMGM 708
+ W +L PK + + K +NE H +
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI 449
Query: 709 MERSRAPVPGFSWGELDQDVDM 730
++ P S + +D
Sbjct: 450 VDHYNIPKTFDSDDLIPPYLDQ 471
Score = 51.4 bits (122), Expect = 1e-06
Identities = 70/556 (12%), Positives = 150/556 (26%), Gaps = 213/556 (38%)
Query: 57 HHRSRHRDERDRRHHHKEKE-----RDRNKSDQSDGGHKSHRRRDEDRKH-RDERKAREA 110
HH H D H ++ K+ D + D K +D K+
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSVFEDAFV-------------DNFDCKDVQDMPKS--- 44
Query: 111 QKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYK 170
+ EID + + K+ + LR L +++ +E +
Sbjct: 45 ----ILSKEEIDHI-------------------IMSKDAVSGTLRLFWTLLSKQ-EEMVQ 80
Query: 171 ERVKDVEQKR-----KRYRTRSRSRSPINKAKNEMDVDEAHQRGEDDGARTPPGPAAPES 225
+ V++V + +T R S + + E R +D S
Sbjct: 81 KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI-----EQRDRLYNDNQVFAKYNV---S 132
Query: 226 RSR---------QDLEAAGLVVLTDESRSPTPQRDEKPGTGQEEGELAGSAESSAGSEES 276
R + +L A V++ D G+G+ +A S +
Sbjct: 133 RLQPYLKLRQALLELRPAKNVLI-----------DGVLGSGKT--WVALDVCLSYKVQCK 179
Query: 277 SQD-------GSEDSSQ-------------DSSSSDEEENDENEDKADKKEKKAKKRKKE 316
+ +S + D + + ++ N + +R +
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239
Query: 317 DASPNESERDVSPHVIMDQDV-DMEIELEKDTLPPYLPAIQGCRSVEEF--KCLNRIEEG 373
+++ +V + + F C +I
Sbjct: 240 SKPYENC------LLVLL-NVQNAKA-------------------WNAFNLSC--KIL-- 269
Query: 374 TYGVVYRAKDKR-TDEIVAL--KRLKMEKEKEGFPITSLREINTLL------KAQ----- 419
+ R K+ TD + A + ++ + E+ +LL + Q
Sbjct: 270 ---LTTR--FKQVTDFLSAATTTHISLDHHSMTL---TPDEVKSLLLKYLDCRPQDLPRE 321
Query: 420 ----HPNIVTVREIVVGSNMDKIFIVMDYVEH-DMKSLMETMRSK---------KQVF-- 463
+P ++ ++ ++ D +H + L + S +++F
Sbjct: 322 VLTTNPRRLS----IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377
Query: 464 ---------IPGEVKCL-------------MQQLLNA----------VAHLHDNWILHRD 491
IP + L + +L + ++ +
Sbjct: 378 LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS---IYLE 434
Query: 492 LKT--SNLLLSHRGIL 505
LK N HR I+
Sbjct: 435 LKVKLENEYALHRSIV 450
Score = 43.7 bits (102), Expect = 4e-04
Identities = 82/570 (14%), Positives = 145/570 (25%), Gaps = 216/570 (37%)
Query: 481 HLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLG 540
H H + H D +T ++ IL + V
Sbjct: 1 HHHHH---HMDFETGEHQYQYKDILS---------------VFEDAFVDN--------FD 34
Query: 541 CKEYSTPIDMWSVGCIF--AEFLCMEPLFTGKSDLEQLSRIFKTMGTPNEKIWPGFSKLP 598
CK+ DM I E + + K + R+F T+ + E++
Sbjct: 35 CKDVQ---DM--PKSILSKEEI---DHIIMSKDAVSGTLRLFWTLLSKQEEM-------- 78
Query: 599 AVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTYDPVTRITADEALRHDYFSE-- 656
VQK F E L+ Y L P+ ++ + E
Sbjct: 79 -VQK--FVE----EVLRIN----------YKFL-----MSPIKTEQRQPSMMTRMYIEQR 116
Query: 657 SPLPIDPAMFPTWP---AKSELAHKKAAMASPKPPSGGHNYKQLEDNEE-GFHMGMMERS 712
L D +F + + L ++A + +L + G+
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALL-------------ELRPAKNVLID-GV---- 158
Query: 713 RAPVPGFSWGELDQDVDMEIELEKDTLPPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRA 772
G G K + A+ C S Y V
Sbjct: 159 ----LGS--G-------------KTWV-----ALDVCLS--------------YKVQ--- 177
Query: 773 KDKRTDEIVAPCKSGNGKFWLENFPSRIRTYHLQVE--SELNHLVTENPGGPLNKKEQPK 830
CK FWL N + +E +L + + N + K
Sbjct: 178 -----------CKMDFKIFWL-NL-KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK 224
Query: 831 WRPMQISNPSTKLRQARSMPH--------WVPNVRRA---GSQPPEYITT---LVQNQVK 876
R I +L +++ + A + +TT V + +
Sbjct: 225 LRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKI--LLTTRFKQVTDFLS 282
Query: 877 QGMEMVKLLREAEQNGFT-AEDLTI----------ALSH--CGDGP-------------P 910
+ + T E ++ L P
Sbjct: 283 -AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341
Query: 911 VTWLINNWRHM-IDTVVTLATNYGHERSENNVGTLSAVEAR---DALRLHNGNV------ 960
TW +NW+H+ D + T+ E+++ L E R D L + +
Sbjct: 342 ATW--DNWKHVNCDKLTTI--------IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL 391
Query: 961 ----WAA-VTECVETRQKKFND--LMSRGN 983
W + V K + L+ +
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQP 421
Score = 34.8 bits (79), Expect = 0.17
Identities = 36/288 (12%), Positives = 82/288 (28%), Gaps = 93/288 (32%)
Query: 1 MSDEDTPDSLEIKPPQA-STQLHKSHH-RSHKDKHSSHRTHGSSSSSQQDKSSSQHKSHH 58
+ + ++P+++ ++ Q Q+ + RS + R H S + + + K +
Sbjct: 189 LKNCNSPETV-LEMLQKLLYQIDPNWTSRSDHSSNIKLRIH---SIQAELRRLLKSKPYE 244
Query: 59 RSRH--RDERDRRH----HHKEK----ERDRNKSDQSDGGHKSHRRRDEDRK--HRDERK 106
+ ++ + + K R + +D +H D DE K
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304
Query: 107 A--------------REAQKS------------KEYTAR-------EIDEL-KAKEADLR 132
+ RE + ++ A D+L E+ L
Sbjct: 305 SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 133 ARLE----RKRYSN----------PL------------REKEKIERELRKERLLEAERVK 166
LE RK + P + + +L K L+E + +
Sbjct: 365 V-LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423
Query: 167 EAY---------KERVKDVEQKRKR----YRTRSRSRSPINKAKNEMD 201
K ++++ + Y ++ + +D
Sbjct: 424 STISIPSIYLELKVKLENEYALHRSIVDHYNIP-KTFDSDDLIPPYLD 470
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 55.4 bits (133), Expect = 9e-08
Identities = 90/555 (16%), Positives = 154/555 (27%), Gaps = 212/555 (38%)
Query: 463 FI-----PGEVKCLMQQLLNAVAHLHDNWILHRDLKT--SNLLLSHRG-ILKVGDFGLAR 514
++ P +V Q L + + ++ D+ + LL + ++K + L +
Sbjct: 67 YVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKE--LIK 124
Query: 515 EY-------GSPLKHYTPIVVTLWYRSPELLLGCKEYSTPIDMWSVGCIFAEFLCMEPLF 567
Y P + L E + + A +F
Sbjct: 125 NYITARIMAKRPFDKKSN---------SALFRAVGEGNAQL--------VA-------IF 160
Query: 568 TGKSDLEQLSRIFKTMGTPNEKIWPGFSKLPAVQKMTFAEY-PNVGGLKTKVAGSILTEL 626
G Q G ++ + F +L + + + Y VG L K + L+EL
Sbjct: 161 GG-----Q--------GNTDD--Y--FEEL---RDL-YQTYHVLVGDL-IKFSAETLSEL 198
Query: 627 -------------GYDLLCKFLTYDPVTRITADEALRHDYFSESPLPIDPAMFPTWP--A 671
G ++L ++L +P T D+ DY P+ + P
Sbjct: 199 IRTTLDAEKVFTQGLNIL-EWLE-NPSN--TPDK----DYLLSIPI--------SCPLIG 242
Query: 672 KSELAHKKAAMASPKPPSGGHNYKQLEDNEEGF--HMGMMERSRAPVPGFSWGELDQDVD 729
+LAH G +L +G H + + A SW V
Sbjct: 243 VIQLAHYVVTAKL-----LGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVR 297
Query: 730 MEIELEKDTLPPYLPAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVAPCKSGNG 789
I + L I G R E + + I+ N
Sbjct: 298 KAITV--------LFFI-GVRCYEAYPNTSL----------------PPSILEDSLENN- 331
Query: 790 KFWLENFPS---RIRTYHL-QVESELNHLVTENPGGPLNKKEQPKWRPMQIS--N-PSTK 842
E PS I QV+ +N N P K+ ++IS N
Sbjct: 332 ----EGVPSPMLSISNLTQEQVQDYVNKT---NSHLPAGKQ-------VEISLVNGA--- 374
Query: 843 LRQ------ARSMPHWVPNVRRAGSQPPEYITTLVQNQVKQGMEMVK------------- 883
+ +S+ +R+A + L Q+++ +K
Sbjct: 375 -KNLVVSGPPQSLYGLNLTLRKAKAPS-----GLDQSRIPFSERKLKFSNRFLPVASPFH 428
Query: 884 --LLREAEQN----------GFTAEDLTIALSHCGDGP--------------------PV 911
LL A F A+D+ I + DG PV
Sbjct: 429 SHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPV 488
Query: 912 TW---LINNWRHMID 923
W H++D
Sbjct: 489 KWETTTQFKATHILD 503
Score = 54.3 bits (130), Expect = 2e-07
Identities = 91/620 (14%), Positives = 165/620 (26%), Gaps = 204/620 (32%)
Query: 31 DKHSSHR----THGSSSSSQQDKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNKSDQSD 86
D +S+ R +HGS ++ S+ +++ ++ + + +
Sbjct: 2 DAYST-RPLTLSHGSLEHVL-LVPTASF--FIASQLQEQFNKILPEPTEGFAADDEPTTP 57
Query: 87 G-------GHKSHRRRDEDRKHRDE--RKA-REAQKSKEY-TAREIDELKAK-EADLRAR 134
G+ S D+ E + Y +I L AK +
Sbjct: 58 AELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFEN--CYLEGNDIHALAAKLLQENDTT 115
Query: 135 LERKR-----YSNPLREKEKIERELRKER---LLEAERVKEA--------------YKER 172
L + + Y + + +R K+ L A A Y
Sbjct: 116 LVKTKELIKNY---ITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDY--- 169
Query: 173 VKDVEQKRKRYRT-RSRSRSPINKA--------KNEMDVDEAHQRGED------DGARTP 217
E+ R Y+T I + + +D ++ +G + + + TP
Sbjct: 170 ---FEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTP 226
Query: 218 PGP---AAPESRSRQDLEAAGL-------VVLTDESRSPTPQRDEKPG-TGQEEGELAGS 266
+ P S G+ V +P R G TG +G +
Sbjct: 227 DKDYLLSIPIS-----CPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAV 281
Query: 267 AESSAGSEES------------------SQDG-SEDSSQDSSSSDEEENDENEDKADKKE 307
A + S ES + S S D EN+E
Sbjct: 282 AIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGV------- 334
Query: 308 KKAKKRKKEDASPNESERDVSPHVIMDQDVDMEIELEKDTLPP----YLPAIQGCRSVEE 363
SP S +++ + V + LP + + G +
Sbjct: 335 ----------PSPMLSISNLT-----QEQVQDYVNKTNSHLPAGKQVEISLVNGAK---- 375
Query: 364 FKCLNRIEEGT----YGVVYRAKDKRTDEIVALKRLKMEKEKEGF-----PITS------ 408
N + G YG+ + + + R+ + K F P+ S
Sbjct: 376 ----NLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHL 431
Query: 409 -----------LREINTLLKAQHPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMR 457
L + N A+ I V + GS+ +R
Sbjct: 432 LVPASDLINKDLVKNNVSFNAKDIQI-PVYDTFDGSD---------------------LR 469
Query: 458 SKKQVFIPGEVKCLMQQLLN--AVAHLHDNWILHRDL---KTSNL-LLSHR-------GI 504
V C+++ + IL D S L +L+HR +
Sbjct: 470 VLSGSISERIVDCIIRLPVKWETTTQFKATHIL--DFGPGGASGLGVLTHRNKDGTGVRV 527
Query: 505 LKVGDF--GLAREYGSPLKH 522
+ G +YG K
Sbjct: 528 IVAGTLDINPDDDYGF--KQ 545
Score = 40.4 bits (94), Expect = 0.004
Identities = 75/438 (17%), Positives = 136/438 (31%), Gaps = 144/438 (32%)
Query: 649 LRHDYFSESPLPIDPAMF-----PTWPAKSELAHKKAA-MASPKPPSGGHNYKQ-----L 697
L+ + F++ LP F PT PA EL K ++S PS + Q L
Sbjct: 33 LQ-EQFNKI-LPEPTEGFAADDEPTTPA--ELVGKFLGYVSSLVEPSKVGQFDQVLNLCL 88
Query: 698 EDNEEGF------HMGMMERSRAPVPGFSWGELDQDVDMEIELEKDTLPPYLPAIQGCRS 751
+ E + H + A +L Q+ D + K+ + Y+ A
Sbjct: 89 TEFENCYLEGNDIH------ALA-------AKLLQENDTTLVKTKELIKNYITARI---- 131
Query: 752 VEEFKCLNR-IEEGTYGVVYRAKDKRTDEIVA-----PCKSGNGKFWLENFPSRIRTYHL 805
R ++ + ++RA + ++VA GN + E +TYH+
Sbjct: 132 -----MAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQ----GNTDDYFEELRDLYQTYHV 182
Query: 806 QVE-------SELNHLVTENPGGPLNKKEQPKWRPMQISNPSTKLRQARSMPHWVPNVRR 858
V L+ L+ + K Q ++ W+
Sbjct: 183 LVGDLIKFSAETLSELIRTTL-------DAEKVFT-----------QGLNILEWL---EN 221
Query: 859 AGSQPP-EYITT---------LVQNQVKQGMEMVKLLREAEQNGFTAEDL---TIALSHC 905
+ P +Y+ + ++Q + + A+ GFT +L +
Sbjct: 222 PSNTPDKDYLLSIPISCPLIGVIQ--------LAHYVVTAKLLGFTPGELRSYLKGATGH 273
Query: 906 GDGPPV--------TWLINNWRHMIDTVVTLATNYG---HERSENNVGTLSAVEARDALR 954
G +W ++ + +T+ G +E N S +E D+L
Sbjct: 274 SQGLVTAVAIAETDSW--ESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILE--DSLE 329
Query: 955 LHNG------NVWAAVTECVETRQKKFNDLMSRGNFTREDIVTVLTANHGNVESAYVELN 1008
+ G ++ E V+ K N + G + + L N V
Sbjct: 330 NNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAG----KQVEISLV----NGAKNLV--- 378
Query: 1009 KTQLKPFLMRIWGPPQGL 1026
+ GPPQ L
Sbjct: 379 ----------VSGPPQSL 386
Score = 40.4 bits (94), Expect = 0.004
Identities = 92/583 (15%), Positives = 157/583 (26%), Gaps = 232/583 (39%)
Query: 533 RSPELLLGCKEYS--TPIDMWSVGCIFAEFLCMEPLFTGKSDLEQLSRIF-KTMGTPNEK 589
R L G E+ P + + QL F K + P E
Sbjct: 7 RPLTLSHGSLEHVLLVPTASFFIA-------------------SQLQEQFNKILPEPTEG 47
Query: 590 IWPGFSKLPAVQKMTFAEYPNVGGLKTKVAGSILTELGYDLLCKFLTY-----DPVTRIT 644
+ P + +L+ KFL Y +P
Sbjct: 48 FAA-------------DDEPT----------TPA-----ELVGKFLGYVSSLVEPSKVGQ 79
Query: 645 ADEALRH--DYFSESPL----------PIDPAMFPTWPAKSEL--AHKKAAMASPKPPSG 690
D+ L F L + T EL + A + + +P
Sbjct: 80 FDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDK 139
Query: 691 GHNYKQLEDNEEG-------FHMGMMERSRAPVPGFSWGELDQDVDMEIELEK--DTLPP 741
N EG F G G G D + EL T
Sbjct: 140 KSNSALFRAVGEGNAQLVAIF--G----------GQ--GNTDDYFE---ELRDLYQTYHV 182
Query: 742 YL-PAIQGCRSVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVAPCKSGNGKFWLENFPSRI 800
+ I+ S E L R V + + I+ WLEN PS
Sbjct: 183 LVGDLIK--FSAETLSELIRTTLDAEKVFTQGLN-----ILE---------WLEN-PSNT 225
Query: 801 --RTYHLQVE-S-------ELNH-LVTENPGGPLNKKEQPKWRPMQISNP---------- 839
+ Y L + S +L H +VT G + P ++ +
Sbjct: 226 PDKDYLLSIPISCPLIGVIQLAHYVVTAKLLG---------FTPGELRSYLKGATGHSQG 276
Query: 840 ---STKLRQARSMPHWVPNVRRA-------G--SQ---PPEYIT-TLVQNQVKQG----- 878
+ + + S + +VR+A G P + +++++ ++
Sbjct: 277 LVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPS 336
Query: 879 -MEMVK-LLREAEQ------NGFTAEDLTIALSHCGDGPPVTWLINNWRHMIDTVVTLAT 930
M + L +E Q N + +S L+N +++ VV+
Sbjct: 337 PMLSISNLTQEQVQDYVNKTNSHLPAGKQVEIS----------LVNGAKNL---VVS--- 380
Query: 931 NYGHERSENNVGTLSAVEARDALRLHNGNVWAAVTECVETR----QKK------------ 974
G +S L + L L A + ++R ++K
Sbjct: 381 --GPPQS------LYGL----NLTLRKA---KAPSGLDQSRIPFSERKLKFSNRFLPVAS 425
Query: 975 -FN-DLMSRGNFTREDIVTVLTANHGNVESAYVELNKTQLK-P 1014
F+ L+ + I L N+ V N ++ P
Sbjct: 426 PFHSHLLVP---ASDLINKDLVKNN-------VSFNAKDIQIP 458
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 51.1 bits (122), Expect = 1e-06
Identities = 47/262 (17%), Positives = 85/262 (32%), Gaps = 34/262 (12%)
Query: 301 DKADKKEKKAKKRKKEDASPNESERDVSPHVIMDQDVDMEIELEKDTLP-PYLPAIQGCR 359
DK A K KE A+ +E + E+++ + + G
Sbjct: 47 DKTATCRTVAVKMLKEGATHSEHR-----------ALMSELKILIHIGHHLNVVNLLGAC 95
Query: 360 SVEEFKCLNRIEEGTYGVVYRAKDKRTDEIVALKRLKMEKEKEGFPITSLREINTLLKAQ 419
+ + +E +G + L+ + E R+ + A
Sbjct: 96 TKPGGPLMVIVEFCKFG----------NLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 145
Query: 420 HPNIVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMR-SKKQVFIPGEVKCLMQQLLNA 478
++ + + S ++ E K + C Q+
Sbjct: 146 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 205
Query: 479 VAHLHDNWILHRDLKTSNLLLSHRGILKVGDFGLAR------EYGSPLKHYTPIVVTLWY 532
+ L +HRDL N+LLS + ++K+ DFGLAR +Y P+ W
Sbjct: 206 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL---KWM 262
Query: 533 RSPELLLGCKEYSTPIDMWSVG 554
+PE + Y+ D+WS G
Sbjct: 263 -APETIFDRV-YTIQSDVWSFG 282
Score = 39.5 bits (92), Expect = 0.004
Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 21/179 (11%)
Query: 372 EGTYGVVYRAKDKRTDE-----IVALKRLK---MEKEKEGFPITSLREINTLLKA-QHPN 422
G +G V A D+ VA+K LK E + E+ L+ H N
Sbjct: 32 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL----MSELKILIHIGHHLN 87
Query: 423 IVTVREIVVGSNMDKIFIVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHL 482
+V + + +++++ + +L +RSK+ F+P +
Sbjct: 88 VVNL-LGACTKPGGPLMVIVEFCKFG--NLSTYLRSKRNEFVP-----YKTKGARFRQGK 139
Query: 483 HDNWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPLKHYTPIVVTLWYRSPELLLGC 541
+ DLK ++ F + + P + + + E L+
Sbjct: 140 DYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICY 198
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp
contractIle protein-transport protein complex; 24.00A
{Gallus gallus}
Length = 1080
Score = 44.7 bits (106), Expect = 2e-04
Identities = 32/277 (11%), Positives = 102/277 (36%), Gaps = 35/277 (12%)
Query: 72 HKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADL 131
K + R+ + + + R++ + E K+ QK + + +A +
Sbjct: 832 RKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIV 891
Query: 132 RARLERKRYSNPLREKEKIERELRKE--RLLEAERVKEAYKERVKDVEQKRKRYRTRSRS 189
+ +R ++ ++L+ E + +++ + ++ +++K +S
Sbjct: 892 YLQCCYRR-----MMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKS 946
Query: 190 RSPINKAKNEMDVDEAHQRGEDDGARTPPGPAAPESRSRQDLEAAGLVVLTDESRSPTPQ 249
+ + N +++ + + + R D+E L + +E+++ T +
Sbjct: 947 ---LLEKMNNLEITYSTE----------------TEKLRSDVER--LRMSEEEAKNATNR 985
Query: 250 RDEKPGTGQEEGELAGSAESSAGSEESSQDGSEDSSQDSSSSDEEENDENEDKAD-KKEK 308
+ E+A + ++ + E + + +++ ++ E K EK
Sbjct: 986 VLSL------QEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEK 1039
Query: 309 KAKKRKKEDASPNESERDVSPHVIMDQDVDMEIELEK 345
+ R+ D + +E V + +++++ E+
Sbjct: 1040 EELNRRIHDQAKEITETMEKKLVEETKQLELDLNDER 1076
Score = 42.0 bits (99), Expect = 0.001
Identities = 18/142 (12%), Positives = 48/142 (33%), Gaps = 3/142 (2%)
Query: 61 RHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERK-AREAQKSKEYTAR 119
R++ + R H + + + + + + R A+ K + AR
Sbjct: 855 RNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEAR 914
Query: 120 EIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQK 179
++ K L ++ + + + E+ K + L ++ ++ DVE+
Sbjct: 915 SVERYKKLHIGLENKIMQLQRK--IDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERL 972
Query: 180 RKRYRTRSRSRSPINKAKNEMD 201
R + + + + E+
Sbjct: 973 RMSEEEAKNATNRVLSLQEEIA 994
Score = 38.9 bits (91), Expect = 0.010
Identities = 29/260 (11%), Positives = 78/260 (30%), Gaps = 37/260 (14%)
Query: 60 SRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAR 119
+ R R + ++ Q K R + KA +
Sbjct: 847 ALLRGYLVRNKYQMMLREHKSIIIQ-----KHVRGWLARVHYHRTLKAIVYLQC------ 895
Query: 120 EIDELKAKEADLRARLERKRYSNPLREKEKIERELRK--ERLLEAERVKEAYKERVKDVE 177
+ AK + ++E + + +E ++ + ++ E + ++ E++ ++E
Sbjct: 896 CYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLE 955
Query: 178 QKRKRYRTRSRSRSPINKAKNEMDVDEAHQRGEDDGARTPPGPAAPESRSRQDLEAAGLV 237
+ ++ D R ++ A+ A E A L
Sbjct: 956 IT-------------YSTETEKLRSDVERLRMSEEEAK-----NATNRVLSLQEEIAKLR 997
Query: 238 VLTDESRSPTPQRDEKPGTGQEEGELAGSAESSAGSEESSQDGSEDSSQDSSSSDEEEND 297
++++ EK + + E + + ++ + ++
Sbjct: 998 KELHQTQT------EKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAK 1051
Query: 298 ENEDKADKKEKKAKKRKKED 317
E + +KK + K+ + D
Sbjct: 1052 EITETMEKKLVEETKQLELD 1071
Score = 34.3 bits (79), Expect = 0.28
Identities = 13/132 (9%), Positives = 44/132 (33%), Gaps = 5/132 (3%)
Query: 59 RSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTA 118
+ + S++ + ++ + ++ + Q K+
Sbjct: 952 NNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIE 1011
Query: 119 REIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQ 178
D+ K + L + L+ + + + EL + +A+ + E ++++ + +
Sbjct: 1012 EWADKYKHETEQLVSELKEQN-----TLLKTEKEELNRRIHDQAKEITETMEKKLVEETK 1066
Query: 179 KRKRYRTRSRSR 190
+ + R R
Sbjct: 1067 QLELDLNDERLR 1078
Score = 33.9 bits (78), Expect = 0.29
Identities = 16/122 (13%), Positives = 44/122 (36%), Gaps = 4/122 (3%)
Query: 42 SSSSQQDKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRR--DEDR 99
+ S + + R + ++ + + + K + ++ ++ +
Sbjct: 956 ITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWAD 1015
Query: 100 KHRD--ERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKE 157
K++ E+ E ++ E +EL + D + + E +++E +L E
Sbjct: 1016 KYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETKQLELDLNDE 1075
Query: 158 RL 159
RL
Sbjct: 1076 RL 1077
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment
2, heavy meromyosin, essential light chain, motor
protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1
PDB: 3j04_A 3dtp_B 3dtp_A
Length = 1184
Score = 44.1 bits (104), Expect = 3e-04
Identities = 43/302 (14%), Positives = 99/302 (32%), Gaps = 33/302 (10%)
Query: 46 QQDKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRD--------E 97
Q+ K Q + + K +++ +++ R E
Sbjct: 867 QRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELE 926
Query: 98 DRKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKE 157
+ H E + E ++ + E +++ + DL +LE + + + EK+ + + +
Sbjct: 927 EILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKIK 986
Query: 158 RLLEA-----------ERVKEAYKERVKDVEQKRKRYRTRSRSRSPINKAKNEMDVDEAH 206
++ + + ++ +ERV D+ ++++ + + K K+E + E
Sbjct: 987 KMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKL-KNKHESMISELE 1045
Query: 207 QRGEDDGARTPPGPAAPESRSRQDLEAAGLVVLTDESRSPTPQRDEKPGTGQEEGELAGS 266
R + E +SRQ+LE L ES Q E E
Sbjct: 1046 VRLKK------------EEKSRQELEKI-KRKLEGESSDLHEQIAELQAQIAELKAQLAK 1092
Query: 267 AESSAGSEESSQDGSEDSSQDSSSSDEEENDENEDKADKKEKKAKKRKKEDASPNESERD 326
E + + + ++ E D + E + R K + + +
Sbjct: 1093 KEEELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEE 1152
Query: 327 VS 328
+
Sbjct: 1153 LE 1154
Score = 42.9 bits (101), Expect = 6e-04
Identities = 44/260 (16%), Positives = 83/260 (31%), Gaps = 47/260 (18%)
Query: 91 SHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKI 150
R++E+ + K E Q++KE + ELK E E K N L+EK +
Sbjct: 851 KVTRQEEEMQ----AKDEELQRTKERQQKAEAELKELEQKHTQLCEEK---NLLQEKLQA 903
Query: 151 ERELRKERLLEAERVKEAYKERVKDVEQKRKRYRTRSRSRSPINKAKN--EMDVDEAHQR 208
E EL E R+ +E + + + R + K + + + ++
Sbjct: 904 ETELYAEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQ 963
Query: 209 GEDDGARTPPGPAAPESRSRQDLEAAGLVVLTDESRSPTPQRDEKPGTGQEEGELAGSAE 268
E+ E +RQ L+ EK +G++
Sbjct: 964 LEE------------EEAARQKLQL------------------EK---VTADGKI----- 985
Query: 269 SSAGSEESSQDGSEDSSQDSSSSDEEENDENEDKADKKEKKAKKRKKEDASPNESERDVS 328
+ + + EE + ++E+KAK K ++
Sbjct: 986 KKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELE 1045
Query: 329 PHVIMDQDVDMEIELEKDTL 348
+ ++ E+E K L
Sbjct: 1046 VRLKKEEKSRQELEKIKRKL 1065
Score = 42.5 bits (100), Expect = 8e-04
Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 9/127 (7%)
Query: 61 RHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDE-----RKAREAQKSKE 115
+ R E ++ E E ++ + + + K +E + + K
Sbjct: 1053 KSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAALARLEDETSQKN 1112
Query: 116 YTAREIDELKAKEADLRARL--ERKRYSNPLREKEKIERELR--KERLLEAERVKEAYKE 171
++I EL++ +DL+ L E+ + ++K + EL K L + +E
Sbjct: 1113 NALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQE 1172
Query: 172 RVKDVEQ 178
+
Sbjct: 1173 LRGSDYK 1179
Score = 39.4 bits (92), Expect = 0.006
Identities = 37/265 (13%), Positives = 83/265 (31%), Gaps = 9/265 (3%)
Query: 90 KSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEK 149
+R ++R+ + E + +E ++ E + L+ K +K
Sbjct: 863 DEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKK 922
Query: 150 IERELR----KERLLEAERVKEAYKERVKDVEQK----RKRYRTRSRSRSPINKAKNEMD 201
E E + R+ E E + + K ++Q+ ++ +R + K D
Sbjct: 923 QELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEKVTAD 982
Query: 202 VDEAHQRGEDDGARTPPGPAAPESRSRQDLEAAGLVVLTDESRSPTPQRDEKPGTGQEEG 261
+ E + ++ + L +E K
Sbjct: 983 GKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMIS 1042
Query: 262 ELAGSAESSAGSEESSQDGSEDSSQDSSSSDEEENDENEDKADKKEKKAKKRKKEDASPN 321
EL + S + + +SS E+ + A+ K + AKK ++ A+
Sbjct: 1043 ELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAALA 1102
Query: 322 ESERDVSPHVIMDQDV-DMEIELEK 345
E + S + + ++E +
Sbjct: 1103 RLEDETSQKNNALKKIRELESHISD 1127
Score = 31.0 bits (70), Expect = 2.4
Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 4/150 (2%)
Query: 4 EDTPDSLEIKPPQASTQLHKSHHRSHKDKHSSHRTHGSSSSSQQDKSSSQHKSHHRSRHR 63
E LE++ + + K + S H + Q + + + ++
Sbjct: 1038 ESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQ---LAKKE 1094
Query: 64 DERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAR-EAQKSKEYTAREID 122
+E E E + + D E+ AR +A+K K + E++
Sbjct: 1095 EELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELE 1154
Query: 123 ELKAKEADLRARLERKRYSNPLREKEKIER 152
LK + D ++ K+ ++
Sbjct: 1155 ALKTELEDTLDTTATQQELRGSDYKDDDDK 1184
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 39.8 bits (92), Expect = 0.002
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 17/89 (19%)
Query: 92 HRRRDED---RKHRDERKAREAQKSKEYTAREIDEL-KAKEADLRARLERKRYSNPLREK 147
R E RK R+E++ R + D K E + R + ++ R+
Sbjct: 78 DRLTQEPESIRKWREEQRKRLQEL---------DAASKVMEQEWREKAKKDLEEWNQRQS 128
Query: 148 EKIERELRKERLLEAERVKEAYKERVKDV 176
E++E+ K A+ K Y++ D+
Sbjct: 129 EQVEK--NKINNRIAD--KAFYQQPDADI 153
Score = 37.4 bits (86), Expect = 0.012
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 16/93 (17%)
Query: 120 EIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQK 179
+ D L E + R R+ L+E + + + +E +A++ E + +R EQ
Sbjct: 76 QADRLTQ-EPE-SIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQS--EQV 131
Query: 180 RKRYRTRSRSRSPINKAKNEMDVDEAHQRGEDD 212
K NK N + +Q+ + D
Sbjct: 132 EK------------NKINNRIADKAFYQQPDAD 152
Score = 35.9 bits (82), Expect = 0.034
Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Query: 63 RDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREID 122
R+E+ +R + + + + K +E + + E+ +K+K R D
Sbjct: 91 REEQRKRLQELDAASKVMEQEWREKAKKD---LEEWNQRQSEQV----EKNKI-NNRIAD 142
Query: 123 E--LKAKEADL 131
+ + +AD+
Sbjct: 143 KAFYQQPDADI 153
Score = 33.2 bits (75), Expect = 0.26
Identities = 8/60 (13%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 46 QQDKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDED-RKHRDE 104
+ D +S + R + + + + + + ++ ++NK ++R D+ + D
Sbjct: 100 ELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNK--------INNRIADKAFYQQPDA 151
Score = 28.6 bits (63), Expect = 7.8
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 294 EENDENEDKADKKEKKAKKRKKEDASPNESE 324
EE + + D K ++ +E A + E
Sbjct: 92 EEQRKRLQELDAASKVMEQEWREKAKKDLEE 122
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex,
cytoplasm, ribonucleoprotein, structural protein; 3.50A
{Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Length = 861
Score = 39.8 bits (92), Expect = 0.005
Identities = 20/152 (13%), Positives = 54/152 (35%), Gaps = 10/152 (6%)
Query: 93 RRRDEDRKHRDE----RKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPL---- 144
D++ RD + + A E + E + R RLER++ +
Sbjct: 642 SVEPVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEK 701
Query: 145 --REKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKRYRTRSRSRSPINKAKNEMDV 202
+E ++E + + + +E + + + ++++ + + E++
Sbjct: 702 ARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAELER 761
Query: 203 DEAHQRGEDDGARTPPGPAAPESRSRQDLEAA 234
+ + E AR +++ ++EA
Sbjct: 762 VKKVREMELIYARAQLELEVSKAQQLANVEAK 793
Score = 39.0 bits (90), Expect = 0.008
Identities = 24/145 (16%), Positives = 53/145 (36%), Gaps = 9/145 (6%)
Query: 59 RSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTA 118
+R R ER + E E+ R + + + S + EA + + +
Sbjct: 683 EARGRLERQKILDQSEAEKARKELLELE--AMSMAVESTGNAKAEAESRAEAARIEGEGS 740
Query: 119 REIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERL-LEAERVKEAYKERVKDVE 177
+LKA+ + E +R +++ ++E + +L LE + ++ K +
Sbjct: 741 VLQAKLKAQALAIETEAELER----VKKVREMELIYARAQLELEVSKAQQLANVEAKKFK 796
Query: 178 QKRKRYRTRSRSRSPINKAKNEMDV 202
+ + + + A EM V
Sbjct: 797 EMTEALGPGTIRD--LAVAGPEMQV 819
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase;
endopeptidase activity, protein kinase activity; HET:
TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A*
2vwb_A*
Length = 540
Score = 38.9 bits (91), Expect = 0.008
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 440 IVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLL 499
+ D + + +M + K + + + ++ V LH N ++H DL TSN +
Sbjct: 405 YIFDVDLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF 464
Query: 500 SHRGILKVGDFGLAR 514
+ DFGL +
Sbjct: 465 DKDLYII--DFGLGK 477
>2zjr_S 50S ribosomal protein L25; ribosome, large ribosomal subunit,
ribonucleoprotein, RNA-binding, rRNA-binding,
tRNA-binding, methylation; 2.91A {Deinococcus
radiodurans} SCOP: b.53.1.1 PDB: 1njm_T* 1nwx_T* 1njp_T*
1xbp_T* 2zjp_S* 2zjq_S 1nwy_T 3cf5_S* 3dll_S* 3pio_S*
3pip_S* 1nkw_T 1sm1_T* 1yl3_V 2b66_Z 2b9n_Z 2b9p_Z
1pnu_T 1pny_T 1vor_W ...
Length = 237
Score = 37.8 bits (88), Expect = 0.010
Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Query: 254 PGTGQEEGELAGSAESSAGSEESSQDGSEDSSQDSSSSDEEENDENEDKADKKEKKAKKR 313
P EE E A AG E S + + + E + E KA+ E A
Sbjct: 174 PRLTAEELEAEVQAAQVAGLVA----AGELSEEAAEAVLEGDASLEEVKAEASEDNAGTD 229
Query: 314 KKEDASP 320
++++
Sbjct: 230 SEDNSDA 236
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM,
protein engineering, structural protein; HET: ADP; 2.80A
{Dictyostelium discoideum} SCOP: k.1.1.1
Length = 1010
Score = 37.7 bits (88), Expect = 0.022
Identities = 29/253 (11%), Positives = 70/253 (27%), Gaps = 18/253 (7%)
Query: 74 EKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLRA 133
E+ R++ + +R +E + ++++A + D +++ ++ + A
Sbjct: 755 EEAREQ-RLGSEQTKSDYLKRANELVQWINDKQASLESR------DFGDSIESVQSFMNA 807
Query: 134 RLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKRYRTRSRSRSPI 193
E K+ P + +E E + + + K +R V + S +
Sbjct: 808 HKEYKKTEKPPKGQEVS----ELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSAL 863
Query: 194 NKAKNEMDVDEAHQRGEDDGARTPPGPAAPESRSRQDLEAAGLVVLTDESRSPTPQRDEK 253
KA+ E + + +R + D
Sbjct: 864 EKAEQEHAEALRIELKRQKKIAV-----LLQKYNRILKKLENWATTKSVYLGSNETGDSI 918
Query: 254 PGTGQEEGELAGSAESSAGSEESSQDGSEDSSQDSSSSDEEENDENEDKADKKEKKAKKR 313
+ L + + S E + S + E K A++
Sbjct: 919 TAVQAKLKNLE-AFDGECQSLEGQSNSDLLSILAQLTELNYNGVP-ELTERKDTFFAQQW 976
Query: 314 KKEDASPNESERD 326
+S +
Sbjct: 977 TGVKSSAETYKNT 989
Score = 37.0 bits (86), Expect = 0.043
Identities = 16/153 (10%), Positives = 41/153 (26%), Gaps = 13/153 (8%)
Query: 55 KSHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSK 114
S ++ + ++++ Q + +K + +
Sbjct: 860 WSALEKAEQEHAEALRIELKRQKKIAVLLQ--------KYNRILKKLENWATTKSVYLGS 911
Query: 115 EYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVK 174
T I ++AK +L A + E + L L E +
Sbjct: 912 NETGDSITAVQAKLKNLEAFDGECQ----SLEGQSNSDLLSILAQLTELN-YNGVPELTE 966
Query: 175 DVEQKRKRYRTRSRSRSPINKAKNEMDVDEAHQ 207
+ + T +S + K +++ +
Sbjct: 967 RKDTFFAQQWTGVKSSAETYKNTLLAELERLQK 999
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP
hydrolysis, GDP, GMP, dynamin related, large GTPase
family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens}
SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A*
2bc9_A* 2d4h_A*
Length = 592
Score = 37.2 bits (85), Expect = 0.026
Identities = 23/167 (13%), Positives = 64/167 (38%), Gaps = 2/167 (1%)
Query: 39 HGSSSSSQQDKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDED 98
G S + Q + ++ +E + +E + KS +S +
Sbjct: 424 AGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLT 483
Query: 99 RKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKER 158
K ++ R +S + +A+ + E++ K + + ER + + EK+E + +
Sbjct: 484 EKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLL 543
Query: 159 LLEAERVKEAYKERVKDVEQKRKRYRTRSRSRSPINKAKNEMDVDEA 205
+ + +E+ + +++ ++ ++ I + +M +A
Sbjct: 544 KEQERTLALKLQEQEQLLKEGFQKESRIMKNE--IQDLQTKMRRRKA 588
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A
{Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A*
1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A*
1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A*
2ga2_A* 2oaz_A*
Length = 478
Score = 36.1 bits (83), Expect = 0.057
Identities = 19/115 (16%), Positives = 36/115 (31%)
Query: 221 AAPESRSRQDLEAAGLVVLTDESRSPTPQRDEKPGTGQEEGELAGSAESSAGSEESSQDG 280
AA S DL+ + ++ + + AG E S S +
Sbjct: 8 AASGSHLNGDLDPDDREEGAASTAEEAAKKKRRKKKKSKGPSAAGEQEPDKESGASVDEV 67
Query: 281 SEDSSQDSSSSDEEENDENEDKADKKEKKAKKRKKEDASPNESERDVSPHVIMDQ 335
+ + + E + D+ + D KK+KK+ + P V +
Sbjct: 68 ARQLERSALEDKERDEDDEDGDGDGDGATGKKKKKKKKKRGPKVQTDPPSVPICD 122
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos
taurus} SCOP: i.9.1.1
Length = 390
Score = 35.6 bits (81), Expect = 0.070
Identities = 34/236 (14%), Positives = 72/236 (30%), Gaps = 20/236 (8%)
Query: 52 SQHKSHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSH-RRRDEDRKHRDERKAREA 110
++ + + + ++ + N +D + R R E + + + +
Sbjct: 77 FNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILRRKVIEQVQRI 136
Query: 111 QKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYK 170
++ ++ ++K E D+ ++ + S R LE + E YK
Sbjct: 137 NLLQKNVRDQLVDMKRLEVDIDIKIRSCKGS--------------CSRALEHKVDLEDYK 182
Query: 171 ERVKDVEQKRKRYRTRSRSRSPINKAKNEMDVDEAHQRGEDDGARTPPGPAAPESRSRQD 230
+ K +EQ SR + K ++ A E ++ +
Sbjct: 183 NQQKQLEQVIAINLLPSRDIQYLPILKMSTITGPV-----PREFKSQLQEAPLEWKALLE 237
Query: 231 LEAAGLVVLTDESRSPTPQRDEKPGTGQEEGELAGSAESSAGSEESSQDGSEDSSQ 286
++ +V+ T GTG G SS G+ G S
Sbjct: 238 MQQTKMVLETFGGDGHARGDSVSQGTGLAPGSPRKPGTSSIGNVNPGSYGPGSSGT 293
>2a6h_D DNA-directed RNA polymerase beta' chain; RNA polymerase holoenzyme,
streptolydigin, antibiotic, transcription regulation;
HET: STD; 2.40A {Thermus thermophilus} SCOP: e.29.1.2
PDB: 1smy_D* 1zyr_D* 1iw7_D* 2a69_D* 2a6e_D 2a68_D*
2be5_D* 2cw0_D 2o5i_D 2o5j_D* 2ppb_D* 3aoh_D* 3aoi_D*
3dxj_D* 3eql_D* 1ynj_D* 1l9z_D 1l9u_D* 1ynn_D* 2auj_D
Length = 1524
Score = 35.5 bits (82), Expect = 0.11
Identities = 23/252 (9%), Positives = 64/252 (25%), Gaps = 6/252 (2%)
Query: 96 DEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELR 155
+ + R+ +EY + + K ++ +E +
Sbjct: 138 KGAILNGVPVEKRQLLTDEEYRELRYGKQETYPLPPGVDALVKDGEEVVKGQELAPGVVS 197
Query: 156 KERLLEAERVKEAYKERVKDVEQKRKRYRTRSRSRSPINKAKN--EMDVDEAHQRGEDDG 213
+ + R RV+ K++R R + + K + E +
Sbjct: 198 RLDGVALYRF----PRRVRVEYVKKERAGLRLPLAAWVEKEAYKPGEILAELPEPYLFRA 253
Query: 214 ARTPPGPAAPESRSRQDLEAAGLVVLTDESRSPTPQRDEKPGTGQEEGELAGSAESSAGS 273
+ + G E+G+ A+
Sbjct: 254 EEEGVVELKELEEGAFLVLRREDEPVATYFLPVGMTPLVVHGEIVEKGQPLAEAKGLLRM 313
Query: 274 EESSQDGSEDSSQDSSSSDEEENDENEDKADKKEKKAKKRKKEDASPNESERDVSPHVIM 333
+ ++ ++ + E + D + + + + E+ + +
Sbjct: 314 PRQVRAAQVEAEEEGETVYLTLFLEWTEPKDYRVQPHMNVVVPEGARVEAGDKIVAAIDP 373
Query: 334 DQDVDMEIELEK 345
+++V E E
Sbjct: 374 EEEVIAEAEGVV 385
>3u5e_R 60S ribosomal protein L19-A; translation, ribosome, ribosomal R
ribosomal protein, STM1, eukaryotic ribosome; 3.00A
{Saccharomyces cerevisiae} PDB: 2wwa_J 2ww9_J 3izc_T
3izs_T 2wwb_J 3o5h_S 3o58_S 3u5i_R 1s1i_P
Length = 189
Score = 33.9 bits (77), Expect = 0.15
Identities = 22/127 (17%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 56 SHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDE-RKAREAQKSK 114
S R+R + R H + + + RR R R K R+A K
Sbjct: 59 SKSRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRL--RVLRRLLAKYRDAGKID 116
Query: 115 EYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVK 174
++ + ++K + + + + + E+ L +E + + A R +
Sbjct: 117 KHLYHVLY-KESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKNRAARDRRAQ 175
Query: 175 DVEQKRK 181
V +KR
Sbjct: 176 RVAEKRD 182
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO,
heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens}
PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Length = 640
Score = 34.7 bits (79), Expect = 0.18
Identities = 20/109 (18%), Positives = 45/109 (41%), Gaps = 12/109 (11%)
Query: 236 LVVLTDESRSPTPQRDEKPGTGQEEGELAGSAESSAGSEESSQDGSEDSSQDSSSSDEEE 295
V+ D P++ E G G+ S++ ++E D D +E
Sbjct: 544 FEVVGDAPEKVGPKQAEDAAKSITNGSDDGAQPSTSTAQEQD---------DVLIVDSDE 594
Query: 296 NDENEDKADKKEKKAKKRKKEDASPNESERDVSPHVIMDQDVDMEIELE 344
D + + +E++++KRK ++ ++R + +++D I L+
Sbjct: 595 EDSSNNADVSEEERSRKRKLDEKENLSAKR---SRIEQKEELDDVIALD 640
>2zkr_p 60S ribosomal protein L19; protein-RNA complex, 60S ribosomal
subunit, ribosomal protein/RNA complex; 8.70A {Canis
familiaris}
Length = 196
Score = 33.5 bits (76), Expect = 0.22
Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 4/127 (3%)
Query: 56 SHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDE-RKAREAQKSK 114
S R R R+ H + + ++ + RR R R R+ RE++K
Sbjct: 59 SRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRM--RILRRLLRRYRESKKID 116
Query: 115 EYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVK 174
+ + LK K + + + + L+ + ++ L + + KEA K R +
Sbjct: 117 RHMYHSLY-LKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREE 175
Query: 175 DVEQKRK 181
++ K++
Sbjct: 176 RLQAKKE 182
>3nkd_A Crispr-associated protein CAS1; crispr,CAS1,YGBT,nuclease, DNA
recombination, DNA repair, IM system; 1.95A {Escherichia
coli}
Length = 305
Score = 33.8 bits (77), Expect = 0.24
Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
Query: 126 AKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYK---ERVKDVEQKRKR 182
A + DLR ++ RK + E R + + R +E RV+ Y ++ R+
Sbjct: 106 ALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRY 165
Query: 183 YRTRSRSRSPINKA 196
IN+
Sbjct: 166 DPKDWEKGDTINQC 179
>3god_A CAS1; crispr, metallonuclease, DNAse, prokaryotic immune system,
immune system; 2.17A {Pseudomonas aeruginosa}
Length = 328
Score = 33.5 bits (76), Expect = 0.33
Identities = 13/106 (12%), Positives = 26/106 (24%), Gaps = 10/106 (9%)
Query: 100 KHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKE-- 157
+ + R AR ++ ++ + R + + +E R
Sbjct: 125 GFWFDEEKRLVAARHFQRAR-LERIRHSWLEDRVLRDAGFAVDATALAVAVEDSARALEQ 183
Query: 158 -------RLLEAERVKEAYKERVKDVEQKRKRYRTRSRSRSPINKA 196
EA K +K + R P N+
Sbjct: 184 APNHEHLLTEEARLSKRLFKLAAQATRYGEFVRAKRGSGGDPANRF 229
>2qag_C Septin-7; cell cycle, cell division, GTP-binding,
nucleotide-binding, phosphorylation, acetylation,
alternative splicing, coiled coil; HET: GDP GTP; 4.00A
{Homo sapiens}
Length = 418
Score = 33.6 bits (76), Expect = 0.38
Identities = 18/114 (15%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 69 RHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKE 128
+ H E R R + + G +++ + + K + E + + ++K E
Sbjct: 283 NNVHYENYRSRKLAAVTYNGVDNNKNKGQLTKSPLAQMEEERR-------EHVAKMKKME 335
Query: 129 ADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKR 182
++ + + ++EK + ++ E E++K+ + + K++E+KR++
Sbjct: 336 MEME-----QVFEMKVKEKVQKLKDSEAELQRRHEQMKKNLEAQHKELEEKRRQ 384
Score = 31.7 bits (71), Expect = 1.4
Identities = 23/130 (17%), Positives = 55/130 (42%), Gaps = 17/130 (13%)
Query: 73 KEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAR---EIDELKAKEA 129
D NK+ + +E R+H + K E + + + + ++ +LK EA
Sbjct: 299 TYNGVDNNKNKGQLTKSPLAQMEEERREHVAKMKKMEMEMEQVFEMKVKEKVQKLKDSEA 358
Query: 130 DLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKRYRTRSRS 189
+L+ R E+ +++ L + E+ ++ +++ + E +++ ++ S
Sbjct: 359 ELQRRHEQ------------MKKNLEAQHKELEEKRRQ-FEDEKANWEAQQRILEQQNSS 405
Query: 190 RSP-INKAKN 198
R+ NK K
Sbjct: 406 RTLEKNKKKG 415
>3u24_A Putative lipoprotein; COG4805, DUF885, structural genomics,
PSI-biology, midwest C structural genomics, MCSG, lipid
BIND protein; 2.25A {Shewanella oneidensis}
Length = 572
Score = 33.4 bits (76), Expect = 0.43
Identities = 12/123 (9%), Positives = 34/123 (27%), Gaps = 16/123 (13%)
Query: 103 DERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEA 162
+ +Q + E+T + + + + L ++ + +
Sbjct: 157 AAARGNISQPTLEHTELAVLQNQGAFSVFSDDLLKQV------ADSGLSDAEKALFKTRF 210
Query: 163 ERVKEAYKERVKDVEQKRKRYRTRSRSRSPI------NKAKN----EMDVDEAHQRGEDD 212
+ +A E + + + + + I K M + +Q+ D
Sbjct: 211 DIASKAINEHISWLNAQVSQLKKEGARSFRIGEELYEQKFAFDIQAGMTAKQLYQKAMVD 270
Query: 213 GAR 215
R
Sbjct: 271 KDR 273
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding,
nucleotide-binding, phosphorylation, acetylation,
alternative splicing, coiled coil; HET: GDP GTP; 4.00A
{Homo sapiens}
Length = 427
Score = 33.2 bits (75), Expect = 0.45
Identities = 22/152 (14%), Positives = 59/152 (38%), Gaps = 13/152 (8%)
Query: 48 DKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKA 107
+++ ++H +R +E K+ D + S +R + + + + +
Sbjct: 288 EQTHTRHYELYRRCKLEEM------GFKDTDPDSKPFSLQETYEAKRNEFLGELQKKEEE 341
Query: 108 REAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELR-KERLLEAERVK 166
Q + + ELK E +L + +R + + + +++L K++ L+ E
Sbjct: 342 MR-QMFVQRVKEKEAELKEAEKELHEKFDRLK-----KLHQDEKKKLEDKKKSLDDEVNA 395
Query: 167 EAYKERVKDVEQKRKRYRTRSRSRSPINKAKN 198
++ ++ Q + S++ + KN
Sbjct: 396 FKQRKTAAELLQSQGSQAGGSQTLKRDKEKKN 427
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A
{Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Length = 995
Score = 33.5 bits (77), Expect = 0.50
Identities = 22/200 (11%), Positives = 52/200 (26%), Gaps = 15/200 (7%)
Query: 132 RARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKRYRTRSRSRS 191
A E K+ P + +E E + + + K +R V + S
Sbjct: 798 NAHKEYKKTEKPPKGQEVS----ELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWS 853
Query: 192 PINKAKNEMDVDEAHQRGEDDGARTPPGPAAPESRSRQDLEAAGLVVLTDESRSPTPQRD 251
+ KA+ E + A + + L+ T + +
Sbjct: 854 ALEKAEQEHAEALRIELKRQKKI------AVLLQKYNRILKKLENWATTKSVYLGSNETG 907
Query: 252 EKPGTGQEEGELAGSAESSAGSEESSQDGSEDSSQDSSSSDEEENDEN-----EDKADKK 306
+ Q + + + + S E + S + + ++
Sbjct: 908 DSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQ 967
Query: 307 EKKAKKRKKEDASPNESERD 326
K + + +E +
Sbjct: 968 WTGVKSSAETYKNTLLAELE 987
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin
assembly, protein binding; 2.55A {Homo sapiens} PDB:
2z6e_A
Length = 483
Score = 32.9 bits (75), Expect = 0.50
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 105 RKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAER 164
+A++ ++ E + EA L+ + ER+R +E + E + L+ A R
Sbjct: 389 SEAKQENENMRKKKEEEERRARMEAQLKEQRERERKMRKAKENSEESGEF--DDLVSALR 446
Query: 165 VKEAYKERVKDVEQKRKRYR------TRSRSRSPIN 194
E + + + +++ RKR +R R + +N
Sbjct: 447 SGEVFDKDLSKLKRNRKRITNQMTDSSRERPITKLN 482
>1u2m_A Histone-like protein HLP-1; coiled coil, chaperone; 2.30A
{Escherichia coli} SCOP: f.48.1.1 PDB: 1sg2_A
Length = 143
Score = 31.4 bits (71), Expect = 0.63
Identities = 16/84 (19%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 103 DERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEA 162
++ E+ R EL+ E DL+A++++ + ++ K+E+++ +R A
Sbjct: 19 AQKTGVSNTLENEFKGRA-SELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFA 77
Query: 163 ERVKEAYKERVKDVEQKRKRYRTR 186
++ + ++R + ++R + TR
Sbjct: 78 QKAQAFEQDRARRSNEERGKLVTR 101
>1jad_A PLC-beta, phospholipase C beta; alpha helical coiled coil,
hydrolase; 2.40A {Meleagris gallopavo} SCOP: h.4.10.1
Length = 251
Score = 32.1 bits (72), Expect = 0.75
Identities = 27/161 (16%), Positives = 53/161 (32%), Gaps = 8/161 (4%)
Query: 23 KSHHRSHKDKHSSHRTHGSSSSSQQDKSSSQHKSHHRSRHRDERDRR-HHHKEKERDRNK 81
K + K+ R K S R D + E E
Sbjct: 32 KLLKKQEKELKELERKGSKRREELLQKYSVLFLEPVYPRGLDSQVVELKERLEMELIHLG 91
Query: 82 SDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYS 141
+ DG + + ++ + ARE Q ++ +E E K+ ++ +LE KR
Sbjct: 92 EEYHDGIRRRKEQHATEQTAKITELAREKQIAELKALKESSESNIKD--IKKKLEAKR-- 147
Query: 142 NPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKR 182
++ ++ ++ + KE +++V Q K
Sbjct: 148 ---LDRIQVMMRSTSDKAAQERLKKEINNSHIQEVVQTIKL 185
Score = 31.3 bits (70), Expect = 1.3
Identities = 13/139 (9%), Positives = 47/139 (33%), Gaps = 2/139 (1%)
Query: 46 QQDKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDER 105
Q+ + + + R +E +++ E + S R E +E
Sbjct: 37 QEKELKELERKGSKRR--EELLQKYSVLFLEPVYPRGLDSQVVELKERLEMELIHLGEEY 94
Query: 106 KAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERV 165
++ +++ + ++ + + + + + I+++L +RL + +
Sbjct: 95 HDGIRRRKEQHATEQTAKITELAREKQIAELKALKESSESNIKDIKKKLEAKRLDRIQVM 154
Query: 166 KEAYKERVKDVEQKRKRYR 184
+ ++ K++
Sbjct: 155 MRSTSDKAAQERLKKEINN 173
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC
domain, vesicle trafficking, membrane curvature,
endocytosis, exocytosis, F-BAR domain; 2.30A {Homo
sapiens}
Length = 276
Score = 32.0 bits (72), Expect = 0.77
Identities = 19/143 (13%), Positives = 51/143 (35%), Gaps = 8/143 (5%)
Query: 41 SSSSSQQDKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRK 100
+ S+S + + + E+ H + + + K + + K
Sbjct: 59 AKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEV---QKYGEEQVKSHK 115
Query: 101 HRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLL 160
E A + + + K+KE +E++R +++ +RE+ K +
Sbjct: 116 KTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQERL----KKEGATQREIEKAA-V 170
Query: 161 EAERVKEAYKERVKDVEQKRKRY 183
++++ + YK V+ + +
Sbjct: 171 KSKKATDTYKLYVEKYALAKADF 193
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone
chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A
{Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A
3c9b_A 3q33_B* 3q35_B* 3dm7_A
Length = 264
Score = 32.0 bits (72), Expect = 0.87
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 279 DGSEDSSQDSSSSDEEENDENEDKADKKEKKAKKRKK 315
+G S D S D++ + D E+ + K++K
Sbjct: 227 EGESGLSADGDSEDDDGSLGEVDLPLSDEEPSSKKRK 263
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome
segregation, cell adhesion, kleisin, MIT cell cycle;
HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP:
c.37.1.12
Length = 430
Score = 32.4 bits (74), Expect = 0.88
Identities = 15/109 (13%), Positives = 35/109 (32%), Gaps = 5/109 (4%)
Query: 94 RRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERE 153
+ + E + Q KEY + K ++ + R+R L+ + E
Sbjct: 160 QSPVELSRMFEEVSGSIQYKKEYEELKEKIEKLSKSATESIKNRRRIHGELKTYKSPGLE 219
Query: 154 LR--KERLLEAERVKEAYKERVKDVEQKRKRYRTRSRSRSPINKAKNEM 200
+ R + + ++ + EQ + + + K K +
Sbjct: 220 VLFQGPRGSRYDEAEGRFEVINNETEQLKAE---EKKILNQFLKIKKKR 265
Score = 31.2 bits (71), Expect = 2.1
Identities = 12/137 (8%), Positives = 36/137 (26%), Gaps = 5/137 (3%)
Query: 64 DERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDE 123
+ + + N K+ D + + E + E +
Sbjct: 123 GKTVSYKDYSIFLENENI----LIKAKNFLVFQGDVEQIAAQSPVELSRMFE-EVSGSIQ 177
Query: 124 LKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKRY 183
K + +L+ ++E+ S K + + R ++ R+
Sbjct: 178 YKKEYEELKEKIEKLSKSATESIKNRRRIHGELKTYKSPGLEVLFQGPRGSRYDEAEGRF 237
Query: 184 RTRSRSRSPINKAKNEM 200
+ + + ++
Sbjct: 238 EVINNETEQLKAEEKKI 254
>2huo_A Inositol oxygenase; protein-substrate complex, HD domain fold,
oxidoreductase; HET: INS; 2.00A {Mus musculus} SCOP:
a.211.1.4 PDB: 3bxd_A*
Length = 289
Score = 32.0 bits (72), Expect = 0.92
Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 8/76 (10%)
Query: 138 KRYSNPLREKEKIERELRK-ERLLEAERVKEAYKER-----VKDVEQKRKRYRTRSRSRS 191
+ E K + R +RV YK V V +KR +Y + S +
Sbjct: 16 VYRPDVDPEMAKSKDSFRNYTSGPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKM 75
Query: 192 PINKAKNEMD--VDEA 205
I +A +D VDE+
Sbjct: 76 TIMEAVGMLDDLVDES 91
>3lvh_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 9.00A {Bos
taurus}
Length = 205
Score = 31.4 bits (70), Expect = 0.95
Identities = 24/121 (19%), Positives = 38/121 (31%), Gaps = 19/121 (15%)
Query: 209 GEDDGARTPPGPAAPESRSRQDLEAAGL---VVLTDESRSPTPQRDEKPGTGQEEGELAG 265
E+D PAA ++Q+ E AG+ + S P +G E A
Sbjct: 19 AEED-------PAA-AFLAQQESEIAGIENDEGFGAPAGSQGGLAQPGPASGASEDMGAT 70
Query: 266 SAESSAGSEESSQDGSEDSSQDSSSSDE--------EENDENEDKADKKEKKAKKRKKED 317
DG +Q + E EE + + D K ++ +E
Sbjct: 71 VNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREK 130
Query: 318 A 318
A
Sbjct: 131 A 131
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for
structural genomics of infec diseases, csgid; HET: MSE
ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A*
4dca_A* 3hav_A* 3ham_A*
Length = 320
Score = 32.0 bits (72), Expect = 0.96
Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 463 FIPGEVKCLMQQLLNAVAHLHD-NWILHRDLKTSNLLLSHRGILKVGDFGLAREYGSPL 520
+ ++ + + +L+ ++H D +N++ + + V DFG G P
Sbjct: 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFN-VGDPD 241
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation,
hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
2hgh_A
Length = 85
Score = 29.5 bits (67), Expect = 0.98
Identities = 8/39 (20%), Positives = 15/39 (38%)
Query: 24 SHHRSHKDKHSSHRTHGSSSSSQQDKSSSQHKSHHRSRH 62
S + H+ H+ + S S K+ + + H H
Sbjct: 47 SRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC,
protein binding; 2.40A {Homo sapiens}
Length = 279
Score = 31.7 bits (71), Expect = 1.1
Identities = 23/159 (14%), Positives = 52/159 (32%), Gaps = 21/159 (13%)
Query: 39 HGSSSSSQQDKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDED 98
S QQ + D + + + Q +R E
Sbjct: 56 EAGKVSIQQQSHMPLQYIYTLFLEHDLSLGTLAMETVAQQKRDYYQ-----PLAAKRTEI 110
Query: 99 RKHRDERKA-------------REAQKSKE-YTAREIDELKAKEADLRARLERKRYSNPL 144
K R E K + ++++ Y R ++L+A+ + P
Sbjct: 111 EKWRKEFKEQWMKEQKRMNEAVQALRRAQLQYVQRS-EDLRARSQGSPEDSAPQASPGPS 169
Query: 145 REKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKRY 183
+++E+ R R+E +A+ + Y+ V++ +++
Sbjct: 170 KQQERR-RRSREEAQAKAQEAEALYQACVREANARQQDL 207
>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain,
UBA domain, three helix bundle, structural genomics; NMR
{Arabidopsis thaliana} SCOP: a.5.2.1
Length = 73
Score = 29.1 bits (65), Expect = 1.2
Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 911 VTWLINNWRHMID-TVVTLATNYGHERSENNVGTL-----SAVEARDALRLHNGNVWAAV 964
+ L+ HM D + ++ + +++V TL + AR AL+ G++ A
Sbjct: 5 SSGLL---SHMDDPDIDAPISHQTSDIDQSSVDTLLSFGFAEDVARKALKASGGDIEKAT 61
>1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta
structure, unique N-myristoyltransferase fold; 3.00A
{Homo sapiens} SCOP: d.108.1.2 d.108.1.2
Length = 496
Score = 31.7 bits (71), Expect = 1.4
Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 13/107 (12%)
Query: 239 LTDESRSPTPQRDEKPGTGQEEGELAGSAESSAGSEESSQDGSEDSSQDSSSSDEEENDE 298
+ DES + E S +EE + S +
Sbjct: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPAN---------- 50
Query: 299 NEDKADKKEKKAKKRKKEDASPNESERDVSPHVIMDQDVDMEIELEK 345
D KK+KK +K+KKE S +S +D P + + E++K
Sbjct: 51 --DTGAKKKKKKQKKKKEKGSETDSAQD-QPVKMNSLPAERIQEIQK 94
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell
projection, disease mutation, membrane, phosphoprotein,
polymorphism; NMR {Homo sapiens}
Length = 216
Score = 30.9 bits (69), Expect = 1.6
Identities = 19/125 (15%), Positives = 41/125 (32%), Gaps = 8/125 (6%)
Query: 201 DVDEAHQRGEDDGARTPPGPAAPESRSRQDLEAAGLVVLTDESRSPTPQRDEKPGTGQEE 260
+ DE ++ ++ P + +++ E+
Sbjct: 92 ETDEFFKKCRVIPSQEHLNGPLPVPFTNGEIQK--------ENSREALAEAALESPRPAL 143
Query: 261 GELAGSAESSAGSEESSQDGSEDSSQDSSSSDEEENDENEDKADKKEKKAKKRKKEDASP 320
A S S + + S + ++ S+SS + D N A KE+ +KR + A
Sbjct: 144 VRSASSDTSEELNSQDSPPKQDSTAPSSTSSSDPILDFNISLAMAKERAHQKRSSKRAPQ 203
Query: 321 NESER 325
+ +
Sbjct: 204 MDWSK 208
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1
PDB: 2tma_A 2w49_A 2w4u_A
Length = 284
Score = 31.2 bits (70), Expect = 1.6
Identities = 36/220 (16%), Positives = 80/220 (36%), Gaps = 4/220 (1%)
Query: 97 EDRKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRK 156
DR E + A+ + E+ L+ K L++ + + + + EL +
Sbjct: 19 LDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEA---LKDAQEKLELAE 75
Query: 157 ERLLEAERVKEAYKERVKDVEQKRKRYRTRSRSRSPINKAKNEMDVDEAHQRGEDDGART 216
++ +AE + R++ E++ R + R + + E DE+ + + +R
Sbjct: 76 KKATDAEADVASLNRRIQLFEEELDRAQERLATAL-QKLEEAEKAADESERGMKVIESRA 134
Query: 217 PPGPAAPESRSRQDLEAAGLVVLTDESRSPTPQRDEKPGTGQEEGELAGSAESSAGSEES 276
E + Q EA + D ++ + E E +E
Sbjct: 135 QKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELE 194
Query: 277 SQDGSEDSSQDSSSSDEEENDENEDKADKKEKKAKKRKKE 316
+ + ++ S + E+ + EDK +++ K + KE
Sbjct: 195 EEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKE 234
Score = 30.0 bits (67), Expect = 3.3
Identities = 26/172 (15%), Positives = 66/172 (38%)
Query: 11 EIKPPQASTQLHKSHHRSHKDKHSSHRTHGSSSSSQQDKSSSQHKSHHRSRHRDERDRRH 70
++ QL + +++ ++ + D+S K +DE
Sbjct: 84 DVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 143
Query: 71 HHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEAD 130
+ + ++ ++ +D ++ R+ + ER A+ S+ A +E+K +
Sbjct: 144 QEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNN 203
Query: 131 LRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKR 182
L++ + + +K + E ++ ++L EAE E + V +E+
Sbjct: 204 LKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDD 255
>3gdb_A Endo-D, putative uncharacterized protein SPR0440;
alpha-beta-barrels, cell WALL, peptidoglycan-anchor,
secreted, hydrolase; HET: PGE; 1.87A {Streptococcus
pneumoniae} PDB: 2xqx_A
Length = 937
Score = 31.5 bits (70), Expect = 2.0
Identities = 19/141 (13%), Positives = 44/141 (31%), Gaps = 3/141 (2%)
Query: 192 PINKAKNEMDVDEAHQRGEDDGARTPPGPAAPESRSRQDLEAAGLVVLTDESRSPTPQRD 251
P N N V + ++ + G A E++ + A + + +
Sbjct: 27 PENSGANTELVSGESEHSTNEADKQNEGEHARENKLEKAEGVATASETASPASNEAATTE 86
Query: 252 EKPGTG---QEEGELAGSAESSAGSEESSQDGSEDSSQDSSSSDEEENDENEDKADKKEK 308
EE AE+ + + D ++ ++++ +E E +KE
Sbjct: 87 TAEAASAAKPEEKASEVVAETPSAEAKPKSDKETEAKPEATNQGDESKPAAEANKTEKEV 146
Query: 309 KAKKRKKEDASPNESERDVSP 329
+ K + + E +
Sbjct: 147 QPDVPKNTEKTLKPKEIKFNS 167
>2wa0_A Melanoma-associated antigen 4; immune system, multiple anomalous
dispersion, cancer/testis 1.4, melanoma antigen family
A 4, CT1.4, MAGE-41; 2.30A {Homo sapiens}
Length = 240
Score = 30.6 bits (69), Expect = 2.0
Identities = 6/35 (17%), Positives = 10/35 (28%)
Query: 35 SHRTHGSSSSSQQDKSSSQHKSHHRSRHRDERDRR 69
H H SS ++ S R+ +
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMDAESLFREALSNK 36
>2iu1_A EIF5, eukaryotic translation initiation factor 5; MFC, GTP-binding,
phosphorylation, protein biosynthesis, translation
inititation; 1.8A {Homo sapiens}
Length = 208
Score = 30.5 bits (68), Expect = 2.2
Identities = 12/52 (23%), Positives = 20/52 (38%)
Query: 285 SQDSSSSDEEENDENEDKADKKEKKAKKRKKEDASPNESERDVSPHVIMDQD 336
+ SS EE DE+E+ K K E + + D+ I++
Sbjct: 153 EAEEESSGGEEEDEDENIEVVYSKLESVPKVETVKSDNKDDDIDIDAILEHH 204
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.9 bits (66), Expect = 2.3
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 7/33 (21%)
Query: 170 KERVKDVEQKRKRYRTRSRSRSP---INKAKNE 199
K+ +K ++ K Y S +P I A E
Sbjct: 19 KQALKKLQASLKLYADDS---APALAIK-ATME 47
Score = 28.0 bits (61), Expect = 9.1
Identities = 12/36 (33%), Positives = 14/36 (38%), Gaps = 10/36 (27%)
Query: 120 EIDELKAKEADLRARLERKRY---SNP-LREKEKIE 151
E LK +A L K Y S P L K +E
Sbjct: 18 EKQALKKLQASL------KLYADDSAPALAIKATME 47
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A
{Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Length = 417
Score = 30.7 bits (68), Expect = 2.8
Identities = 6/49 (12%), Positives = 17/49 (34%)
Query: 274 EESSQDGSEDSSQDSSSSDEEENDENEDKADKKEKKAKKRKKEDASPNE 322
E + E+ + + +E+++ ED + ++ E
Sbjct: 365 LEFEFEEDEEEADEDEDEEEDDDHGLEDDDGESAEEQDDFAGRPEQAPE 413
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel
inter domain, chaperone; 3.94A {Mycobacterium
tuberculosis} PDB: 3m9d_A
Length = 251
Score = 30.2 bits (67), Expect = 2.8
Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 8/94 (8%)
Query: 91 SHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKI 150
R + RD + A E+++L+ + A LR +LE S+ +
Sbjct: 3 ESERSEAFGIPRDSPLSSG-------DAAELEQLRREAAVLREQLENAVGSHAPTRSARD 55
Query: 151 ERELRKERLLEAERVKEAYKERVKDVEQKRKRYR 184
+L R+ E +K+ Q+ R
Sbjct: 56 IHQLE-ARIDSLAARNSKLMETLKEARQQLLALR 88
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Length = 291
Score = 30.3 bits (69), Expect = 3.0
Identities = 11/55 (20%), Positives = 17/55 (30%), Gaps = 18/55 (32%)
Query: 891 NGFT-----AEDLTIALSHCGDGPPV--------TWLINNWRHMIDTVVTLATNY 932
F + I L G G P+ T ++ W + LA N+
Sbjct: 3 TNFEQTIVDTTEARINLVKAGHGAPLLLLHGYPQTHVM--WHKIAP---LLANNF 52
>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics,
structural genomics consortium, SGC, oxidoreductase;
HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4
Length = 250
Score = 30.0 bits (67), Expect = 3.1
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 163 ERVKEAYKER-----VKDVEQKRKRYRTRSRSRSPINKAKNEMD--VDEA 205
+RV YK V V K ++ S + + +A + +D VDE+
Sbjct: 3 DRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDES 52
>4dey_B Voltage-dependent L-type calcium channel subunit; maguk, voltage
dependent calcium channel, transport protein; 1.95A
{Oryctolagus cuniculus} PDB: 1vyt_E
Length = 106
Score = 28.6 bits (63), Expect = 3.7
Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 126 AKEADLRARLERKRYSNPLREKEKIERELR--KERLLEAERVKEAYKERVKDVEQKRKRY 183
+KE R + + + LREK+++E +L+ + + +AE + ++ D E+ R
Sbjct: 6 SKE---REKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEDEGMDEEKPRNMS 62
Query: 184 RTRSRSRSPINKAKNEMDVD 203
S + S + D++
Sbjct: 63 MPTSETESVNTENVAGGDIE 82
>2j63_A AP-endonuclease; base excision repair, lyase; 2.48A {Leishmania
major}
Length = 467
Score = 30.4 bits (68), Expect = 3.7
Identities = 20/149 (13%), Positives = 36/149 (24%), Gaps = 2/149 (1%)
Query: 52 SQHKSHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQ 111
S H HH S R K + S S S +K ++
Sbjct: 3 SSHHHHHHSSGLVPRGSHMASKRCRQCSGDSASSSTSSLSPSELPPSKKAAGGQRVTAEV 62
Query: 112 KSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKE 171
+ T + + + KI E + AE + +
Sbjct: 63 EVAPITTDATSATVTAAGGAKKKATTGSPARRTSSAAKITNGDAGELIRTAEALAALNAK 122
Query: 172 RVKDVEQKRKRYRTRSRSRSPINKAKNEM 200
K ++ R + + + M
Sbjct: 123 --KSEKEIWSDVVPFVRRTTDSDFDPSRM 149
Score = 29.6 bits (66), Expect = 6.2
Identities = 24/149 (16%), Positives = 40/149 (26%), Gaps = 4/149 (2%)
Query: 51 SSQHKSHHRS----RHRDERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERK 106
SS H HH S R +R + + + ++ +
Sbjct: 3 SSHHHHHHSSGLVPRGSHMASKRCRQCSGDSASSSTSSLSPSELPPSKKAAGGQRVTAEV 62
Query: 107 AREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVK 166
+ +A AK+ R+ S +R L A K
Sbjct: 63 EVAPITTDATSATVTAAGGAKKKATTGSPARRTSSAAKITNGDAGELIRTAEALAALNAK 122
Query: 167 EAYKERVKDVEQKRKRYRTRSRSRSPINK 195
++ KE DV +R S + K
Sbjct: 123 KSEKEIWSDVVPFVRRTTDSDFDPSRMYK 151
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn
complex, rRNA processing, transferase; HET: ADP; 1.75A
{Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB:
1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Length = 282
Score = 29.9 bits (67), Expect = 3.8
Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 11/80 (13%)
Query: 440 IVMDYVEHDMKSLMETMRSKKQVFIPGEVKCLMQQLLNAVAHLHDNWILHRDLKTSNLLL 499
++M+ ++ + ++ +L VA + I+H DL N+L+
Sbjct: 177 VLMELIDAKELYRVR----------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV 226
Query: 500 SHRGILKVGDFGLAREYGSP 519
+ + DF + E G
Sbjct: 227 -SEEGIWIIDFPQSVEVGEE 245
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta
hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris}
PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Length = 306
Score = 30.0 bits (68), Expect = 4.1
Identities = 10/47 (21%), Positives = 15/47 (31%), Gaps = 13/47 (27%)
Query: 894 TAEDLTIALSHCGDGPPV--------TWLINNWRHMIDTVVTLATNY 932
I GDGPP+ T ++ W + LA +
Sbjct: 19 NTSSGRIFARVGGDGPPLLLLHGFPQTHVM--WHRVAP---KLAERF 60
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold,
epoxide degradation, epichlorohydrin; 2.10A
{Agrobacterium tumefaciens} SCOP: c.69.1.11
Length = 294
Score = 29.9 bits (68), Expect = 4.1
Identities = 11/47 (23%), Positives = 15/47 (31%), Gaps = 13/47 (27%)
Query: 894 TAEDLTIALSHCGDGPPV--------TWLINNWRHMIDTVVTLATNY 932
D+ I G GP + W W +I LA +Y
Sbjct: 15 QLPDVKIHYVREGAGPTLLLLHGWPGFWWE--WSKVIG---PLAEHY 56
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo
sapiens} PDB: 2qa7_A
Length = 120
Score = 28.6 bits (63), Expect = 4.3
Identities = 19/115 (16%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Query: 62 HRDERDR--RHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAR 119
++DE+D ++E + + + + + + E E Q ++ A
Sbjct: 9 NKDEKDHLIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAAD 68
Query: 120 EIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVK 174
+ + L+A+ +LR + E + + + + + ++R ++KE Y E V+
Sbjct: 69 DCEFLRAELDELRRQREDTEKAQRSLSEIERKAQANEQRY---SKLKEKYSELVQ 120
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB,
proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR
binding; 3.65A {Bacillus subtilis}
Length = 468
Score = 29.9 bits (68), Expect = 4.4
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 128 EADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKER---VKDVEQKRKRYR 184
EA + RL L+E E+ E+RKE+ V+ E+ ++D EQ+ +
Sbjct: 380 EAGSKVRLRSFTTPPNLKELEQKLDEVRKEK---DAAVQSQEFEKAASLRDTEQRLREQV 436
Query: 185 TRSRSRSPINKAKNEMDVDEAH 206
++ + + +V
Sbjct: 437 EDTKKSWKEKQGQENSEVTVDD 458
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN
nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A
{Haemophilus influenzae} PDB: 3zu0_A*
Length = 579
Score = 30.3 bits (68), Expect = 4.5
Identities = 17/153 (11%), Positives = 36/153 (23%), Gaps = 19/153 (12%)
Query: 855 NVRRAGSQPPEYITTLVQNQVKQGMEMVKLLREAEQNGFTAEDLTIALSHCGDGPPVTWL 914
P +++ + +L + + ++S L
Sbjct: 283 IASITRKIPHVLMSSHKLQVKNSEGKWAELTGDERKKALDTLKSMKSISLDDHDAKTDKL 342
Query: 915 INNWRHMID---------TVVTLATNYGHERS-----ENNVGTLSAVEARDALRLHNGNV 960
I ++ D + R N G+++ + + V
Sbjct: 343 IAKYKSEKDRLAQEIVGVITGSAMPGGSANRIPNKAGSNPEGSIATRFIAETMYNELKTV 402
Query: 961 WAAVTECVETRQKKFNDLMSRGNFTREDIVTVL 993
+ R + GN T D T L
Sbjct: 403 DLTIQNAGGVRAD-----ILPGNVTFNDAYTFL 430
>3nke_A Protein YGBT; crispr, CAS1, nuclease, DNA recombination, DNA
repair, system; 1.40A {Escherichia coli}
Length = 200
Score = 29.5 bits (66), Expect = 4.9
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Query: 130 DLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYK---ERVKDVEQKRKRYRTR 186
DLR ++ RK + E R + + R +E RV+ Y ++ R+
Sbjct: 19 DLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKD 78
Query: 187 SRSRSPINKA 196
IN+
Sbjct: 79 WEKGDTINQC 88
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle
protein; 2.50A {Gallus gallus}
Length = 101
Score = 27.9 bits (62), Expect = 5.1
Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 90 KSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEK 149
K + DR + E ++A+ + E L+ K +E+ YS ++E ++
Sbjct: 15 KLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEK--YSESVKEAQE 72
Query: 150 IERELRKERLLEAERVKEAYKERVKDVEQ 178
+ E +++ +AE + R++ VE+
Sbjct: 73 -KLEQAEKKATDAEAEVASLNRRIQLVEE 100
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine
exchange factor, coiled-coil, endocytosis/exocytosis
complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Length = 154
Score = 29.0 bits (64), Expect = 5.1
Identities = 19/146 (13%), Positives = 55/146 (37%), Gaps = 10/146 (6%)
Query: 48 DKSSSQHKSHHRSRHRDERDR-RHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERK 106
DK S + ++S + + + ++ + + + + + E +
Sbjct: 13 DKQSHLEEQLNKSLKTIASQKAAIENYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENE 72
Query: 107 AR-EAQKSKEYTAREIDELKAK---EADLRARLERKRYSNPLREKEKIERELRKERLLEA 162
R +A++ + +E+++L A EA+ RK +++ +LR E
Sbjct: 73 LRTKAEEEADKLNKEVEDLTASLFDEANNMVADARKEKYAIEILNKRLTEQLR-----EK 127
Query: 163 ERVKEAYKERVKDVEQKRKRYRTRSR 188
+ + + ++K++++ S
Sbjct: 128 DTLLDTLTLQLKNLKKVMHSLDNEST 153
>4f61_I Stathmin-like domain R4; alpha-tubulin, beta-tubulin, GTPase,
microtubule, RB3, stath tubulin, cell cycle; HET: GTP
GDP; 4.17A {Artificial gene}
Length = 240
Score = 29.2 bits (64), Expect = 5.6
Identities = 26/188 (13%), Positives = 61/188 (32%), Gaps = 7/188 (3%)
Query: 30 KDKHSSHRTHGSSSSSQQDKSSSQHKSHHRSRHRDERDRRHHHKEKERDRNKSDQSDGGH 89
K + + R + + + + + E + KE+ K + +
Sbjct: 50 KLEAAEERRKYQEAELLKHLAEKREHEREVIQRAIEENNNWIKMAKEKLAQKMESNKENR 109
Query: 90 KSHRRRDEDRKHRDERKAREAQKSK-------EYTAREIDELKAKEADLRARLERKRYSN 142
++H +R ++ A E ++ A+E K + + +
Sbjct: 110 EAHFAAMLERLQEKDKHAEEVRQRAIEENNNWIKMAKEKLAQKMESNKENRKYQEAELLK 169
Query: 143 PLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKRYRTRSRSRSPINKAKNEMDV 202
L EK + ERE+ + + E + KE++ + K R + + +
Sbjct: 170 HLAEKREHEREVIQRAIEENNNWIKMAKEKLAQKMESNKENREAHFAAMLERLQEKDKHA 229
Query: 203 DEAHQRGE 210
+E + E
Sbjct: 230 EEVRKNKE 237
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A
{Burkholderia SP} PDB: 1y37_A
Length = 304
Score = 29.6 bits (67), Expect = 5.8
Identities = 10/47 (21%), Positives = 14/47 (29%), Gaps = 13/47 (27%)
Query: 894 TAEDLTIALSHCGDGPPV--------TWLINNWRHMIDTVVTLATNY 932
D+TI G GP + + W + LA Y
Sbjct: 11 DVGDVTINCVVGGSGPALLLLHGFPQNLHM--WARVAP---LLANEY 52
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase;
1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A
3pi6_A
Length = 301
Score = 29.5 bits (67), Expect = 5.9
Identities = 9/47 (19%), Positives = 15/47 (31%), Gaps = 13/47 (27%)
Query: 894 TAEDLTIALSHCGDGPPV--------TWLINNWRHMIDTVVTLATNY 932
+ + + G GP V TW W ++ LA +
Sbjct: 16 EVDGVKLHYVKGGQGPLVMLVHGFGQTWYE--WHQLMP---ELAKRF 57
>3izy_P Translation initiation factor IF-2, mitochondrial; E coli, RNA,
ribosomal; 10.80A {Bos taurus}
Length = 537
Score = 29.5 bits (67), Expect = 6.4
Identities = 12/79 (15%), Positives = 28/79 (35%)
Query: 103 DERKAREAQKSKEYTAREIDELKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEA 162
E +ARE ++Y + + + R E + REK + +
Sbjct: 260 SEPRAREVVDWRKYEQEQEKNKEDLKLIEEKRKEHQEAHRKDREKYGTVHWKERSYIKYR 319
Query: 163 ERVKEAYKERVKDVEQKRK 181
E+ ++ + + +E+
Sbjct: 320 EKRQQQPLKPKEKLERDSN 338
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil,
alanine, axial stagger, radius, SIDE-chain packing,
crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Length = 147
Score = 28.5 bits (63), Expect = 6.6
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 73 KEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLR 132
+E E+ ++S++ +S ++DE++ E + +EA+ E R+ +E+ K +
Sbjct: 27 EEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIE 86
Query: 133 ARLER--KRYSNPLREKEKIERELR--KERLLEAERVKEAYKERVKDVEQK 179
+ LER +R + ++E EL+ L E E + +E +
Sbjct: 87 SDLERAEERAELSEGKCAELEEELKTVTNNLKSLEDKVEELLSKNYHLENE 137
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB,
proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR
binding; 6.93A {Bacillus subtilis}
Length = 758
Score = 29.5 bits (67), Expect = 6.9
Identities = 15/81 (18%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 128 EADLRARLERKRYSNPLREKEKIERELR--KERLLEAERVKEAYKERVKDVEQKRKRYRT 185
EA + RL L+E E+ E+R K+ ++++ ++A ++D EQ+ +
Sbjct: 380 EAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKA--ASLRDTEQRLREQVE 437
Query: 186 RSRSRSPINKAKNEMDVDEAH 206
++ + + +V
Sbjct: 438 DTKKSWKEKQGQENSEVTVDD 458
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A
{Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20
c.37.1.20
Length = 854
Score = 29.4 bits (67), Expect = 7.1
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 12/61 (19%)
Query: 119 REIDELKAKEADLRARLERKRYSNPLREKEKIE--RELRKERLLEAERVKEAYKERVKDV 176
EI +L + A LRA E RE+E + RE + L+ R + ER D+
Sbjct: 437 AEIAKLTEEIAKLRAEWE--------REREILRKLREAQHR--LDEVRREIELAERQYDL 486
Query: 177 E 177
Sbjct: 487 N 487
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA
complex, transcription/DNA complex; HET: DNA; 2.00A
{Schizosaccharomyces pombe} SCOP: h.1.3.1
Length = 70
Score = 26.9 bits (59), Expect = 7.5
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 73 KEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAKEADLR 132
K + +N++ Q ++ R+R ED E + ++ T E D+L+ K L
Sbjct: 9 SSKRKAQNRAAQ-----RAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLE 63
Query: 133 ARLER 137
L
Sbjct: 64 EELRI 68
>4a17_V RPL7, 60S ribosomal protein L7; eukaryotic ribosome, ribosome,
eukaryotic initiation factor 60S, translation, large
ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB:
4a1a_V 4a1c_V 4a1e_V
Length = 239
Score = 29.0 bits (64), Expect = 7.7
Identities = 9/72 (12%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
Query: 124 LKAKEADLRARLERKRYSNPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKRY 183
K D + R + + ++ + E + +A++ Y+ K + ++++
Sbjct: 10 QKKLARDEKLRKAKAEQ---RKASSAQMKQRKAEWISKAQKYAAEYEAAEKKIVDEKRKA 66
Query: 184 RTRSRSRSPINK 195
R P
Sbjct: 67 RKTGAFYVPAEA 78
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL
ABD; 1.70A {Geobacillus stearothermophilus} SCOP:
b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Length = 686
Score = 29.0 bits (65), Expect = 9.1
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 441 VMDYVEHD-MKSLMETMRSKKQVFIPGEV 468
+ + KSL + + KK +F+ GE
Sbjct: 229 AVKHFNSGFSKSLADKLYQKKDIFLVGEW 257
>2es4_D Lipase chaperone; protein-protein complex, steric chaperone,
triacylglycerol hydrolase, all alpha helix protein, A/B
hydrolase fold; 1.85A {Burkholderia glumae} SCOP:
a.137.15.1
Length = 332
Score = 29.0 bits (64), Expect = 9.2
Identities = 18/127 (14%), Positives = 34/127 (26%), Gaps = 4/127 (3%)
Query: 64 DERDRRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDE 123
+ DR + ++ +RR R ++ AR
Sbjct: 156 AAMQLALDQRAALADRTLGEWAEPFFGDEQRRQRHDLERIRIANDTTLSPEQKAARLAAL 215
Query: 124 LKAKEADLRARLERKRYSNPLREKE----KIERELRKERLLEAERVKEAYKERVKDVEQK 179
D RA+ K K + R A+ + R ++Q
Sbjct: 216 DAQLTPDERAQQAALHAQQDAVTKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQMQQD 275
Query: 180 RKRYRTR 186
+ ++TR
Sbjct: 276 DEAWQTR 282
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2;
signaling protein, NPY motif, binding pocket; 2.11A
{Homo sapiens} PDB: 1y2o_A 1wdz_A
Length = 253
Score = 28.7 bits (63), Expect = 9.8
Identities = 11/76 (14%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 68 RRHHHKEKERDRNKSDQSDGGHKSHRRRDEDRKHRDERKAREAQKSKEYTAREIDELKAK 127
+ + E+ + D+ K R++ + K+ + +E Q + ++ +
Sbjct: 123 LKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYV 182
Query: 128 EADLRARL--ERKRYS 141
+ L ER+R+
Sbjct: 183 SDGYKTALTEERRRFC 198
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A
{Drosophila melanogaster}
Length = 290
Score = 28.6 bits (63), Expect = 9.9
Identities = 6/51 (11%), Positives = 22/51 (43%)
Query: 138 KRYSNPLREKEKIERELRKERLLEAERVKEAYKERVKDVEQKRKRYRTRSR 188
K + ++ + RK+ ++ ++ + + + VE+ + Y + +
Sbjct: 99 KTWQKENYHHTLMQIKERKDLEDLFKKAQKPWAKLLAKVEKAKADYHSACK 149
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.313 0.130 0.380
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 15,687,191
Number of extensions: 978370
Number of successful extensions: 3789
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2904
Number of HSP's successfully gapped: 669
Length of query: 1028
Length of database: 6,701,793
Length adjustment: 103
Effective length of query: 925
Effective length of database: 3,825,930
Effective search space: 3538985250
Effective search space used: 3538985250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (27.8 bits)