BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18165
(259 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|270010446|gb|EFA06894.1| hypothetical protein TcasGA2_TC009839 [Tribolium castaneum]
Length = 294
Score = 319 bits (817), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 159/261 (60%), Positives = 203/261 (77%), Gaps = 7/261 (2%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
QREEKQLESSL+S++ ++N++KS + M++K++++ ++LNWPTFLDN+AL+SGQ ++++K
Sbjct: 38 QREEKQLESSLDSIIQRVNDLKSSIASMIYKVENEYETLNWPTFLDNYALMSGQLTSLSK 97
Query: 62 VLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKL 121
VLSHDK P +RNLTVLPL+L+PER+E+L ++TE RV F HDLVPDYLRTK EP E+K+
Sbjct: 98 VLSHDKCPTLRNLTVLPLMLSPERDEQLAQMTEHRVTTFAHDLVPDYLRTKLEPLAENKM 157
Query: 122 IQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTH 181
+QLEHKA++LSY+ AQKQ A + KV++HV ++VSKAREEWE E+ ARG T Q SS+ DTH
Sbjct: 158 MQLEHKASTLSYENAQKQIAAYQKVVSHVWELVSKAREEWEVESSARGSTQQNSSVADTH 217
Query: 182 SLVAAVGMGRGLKM-IMP-GPGAPVGPGMMVAPGGPGRPVG-PGPGMPMGPGGQPMGMMG 238
SLVAAVGMG+GLKM P G P GMMV P GRP G PG G M P Q M M
Sbjct: 218 SLVAAVGMGKGLKMGANPNGQPNPTSGGMMVPPQ--GRPGGTPGQGQ-MPPSTQTM-TMN 273
Query: 239 KNPSGIKTNIKAAAAIHPYSR 259
K PS IKTNIK+A IHPY R
Sbjct: 274 KAPSAIKTNIKSATQIHPYGR 294
>gi|91086795|ref|XP_973374.1| PREDICTED: similar to mediator complex, subunit, putative
[Tribolium castaneum]
Length = 283
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/261 (60%), Positives = 203/261 (77%), Gaps = 7/261 (2%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
QREEKQLESSL+S++ ++N++KS + M++K++++ ++LNWPTFLDN+AL+SGQ ++++K
Sbjct: 27 QREEKQLESSLDSIIQRVNDLKSSIASMIYKVENEYETLNWPTFLDNYALMSGQLTSLSK 86
Query: 62 VLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKL 121
VLSHDK P +RNLTVLPL+L+PER+E+L ++TE RV F HDLVPDYLRTK EP E+K+
Sbjct: 87 VLSHDKCPTLRNLTVLPLMLSPERDEQLAQMTEHRVTTFAHDLVPDYLRTKLEPLAENKM 146
Query: 122 IQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTH 181
+QLEHKA++LSY+ AQKQ A + KV++HV ++VSKAREEWE E+ ARG T Q SS+ DTH
Sbjct: 147 MQLEHKASTLSYENAQKQIAAYQKVVSHVWELVSKAREEWEVESSARGSTQQNSSVADTH 206
Query: 182 SLVAAVGMGRGLKM-IMP-GPGAPVGPGMMVAPGGPGRPVG-PGPGMPMGPGGQPMGMMG 238
SLVAAVGMG+GLKM P G P GMMV P GRP G PG G M P Q M M
Sbjct: 207 SLVAAVGMGKGLKMGANPNGQPNPTSGGMMVPPQ--GRPGGTPGQGQ-MPPSTQTM-TMN 262
Query: 239 KNPSGIKTNIKAAAAIHPYSR 259
K PS IKTNIK+A IHPY R
Sbjct: 263 KAPSAIKTNIKSATQIHPYGR 283
>gi|242021017|ref|XP_002430943.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516163|gb|EEB18205.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 249
Score = 317 bits (812), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/260 (63%), Positives = 209/260 (80%), Gaps = 12/260 (4%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE++L++++ +++++KS L M+FKI+++ +++NWPTFLDNFALLSG + ++
Sbjct: 1 MQREEKQLENALDAIMQRISDLKSSLAAMIFKIENEYETINWPTFLDNFALLSGHLTTLS 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L DKTPP+RNLTVLPL+L+PER+EELLRLTE RVPAFTHDLVPDYLRTK +P+VE K
Sbjct: 61 KMLGADKTPPLRNLTVLPLMLSPERDEELLRLTENRVPAFTHDLVPDYLRTKPDPEVEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+IQLE KAA+LS + AQKQ A ++KV+ H+ +IVSKAREEWE+E +R G QTSS+ DT
Sbjct: 121 MIQLELKAANLSNETAQKQVAAYSKVVNHIYEIVSKAREEWETETSSRAGQTQTSSMADT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPG-PGMPMGPGGQPMGMMGK 239
H+LVAAVGMG+GLK + PGAP PGMMVAP GPGRP GP MGP G GK
Sbjct: 181 HALVAAVGMGKGLKAM---PGAP--PGMMVAPVGPGRPPGPSQQAQQMGPIG------GK 229
Query: 240 NPSGIKTNIKAAAAIHPYSR 259
PS IKTNIK+ ++HPYSR
Sbjct: 230 APSTIKTNIKSGGSMHPYSR 249
>gi|383848113|ref|XP_003699696.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like isoform 2 [Megachile rotundata]
Length = 258
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/263 (57%), Positives = 196/263 (74%), Gaps = 12/263 (4%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQL+S+LE+++MK+N++K+ + M+FK++H+ ++LNWP FLDNFAL+SG ++++
Sbjct: 1 MQREEKQLDSALEAIIMKVNDLKTAIAAMIFKLEHEYETLNWPNFLDNFALISGHLTSLS 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L HDK P +RNLTVLPL L+PE++E+LLRLTEGR+ F HDLVPDYLRTK EP E K
Sbjct: 61 KILGHDKAPNLRNLTVLPLRLSPEKDEDLLRLTEGRISTFAHDLVPDYLRTKVEPQAEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
++QLE KAA+L+Y+ + KQ + KVI+HV DI +KAREEWESE+G+R QTSS DT
Sbjct: 121 MMQLEAKAANLNYETSHKQVTQYTKVISHVWDIANKAREEWESESGSRAAQAQTSSTADT 180
Query: 181 HSLVAAVGMGRGLK-----MIMPGPGAPVGPGMMVA-PGGPGRPVGPGPGMPMGPGGQPM 234
H+LVAAVG+G+GLK M+ G + V GMMV PG + G G G M
Sbjct: 181 HALVAAVGIGKGLKSDSVPMVQSGVNS-VSSGMMVGRPGSQQQNSGQGT-----LGNSSM 234
Query: 235 GMMGKNPSGIKTNIKAAAAIHPY 257
G MGK PS IKTNIKAA+ IHPY
Sbjct: 235 GQMGKAPSTIKTNIKAASQIHPY 257
>gi|307170762|gb|EFN62887.1| Mediator of RNA polymerase II transcription subunit 8 [Camponotus
floridanus]
Length = 258
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/263 (58%), Positives = 196/263 (74%), Gaps = 12/263 (4%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQL+S+LE+++M++N++K+ + M+FKI+H+ ++LNWP FLDNFAL+SG ++++
Sbjct: 1 MQREEKQLDSALEAIIMRVNDLKTAIAAMIFKIEHEYETLNWPNFLDNFALISGHLTSLS 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L+HDK P +RNLTVLPL L+PE++EELLRLTEGR+P F HDLVPDYLRTK EP E K
Sbjct: 61 KILAHDKAPNLRNLTVLPLRLSPEKDEELLRLTEGRIPTFAHDLVPDYLRTKLEPQAEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
++QLE KAA+++ + + KQ + KVI HV DI +KAREEWESEAGAR QTSS DT
Sbjct: 121 MMQLEAKAANVNIETSHKQLTQYTKVIGHVWDIANKAREEWESEAGARATQAQTSSAADT 180
Query: 181 HSLVAAVGMGRGLK-----MIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQP-M 234
H+L+AAVGMG+GLK M+ G + V GMMV GRP GP G P M
Sbjct: 181 HALLAAVGMGKGLKSDSIQMVQSGVNS-VNNGMMV-----GRPGNQQQTPGQGPMGNPQM 234
Query: 235 GMMGKNPSGIKTNIKAAAAIHPY 257
G M K PS IKTNIKAA+ IHPY
Sbjct: 235 GQMNKAPSAIKTNIKAASQIHPY 257
>gi|380029017|ref|XP_003698179.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Apis florea]
Length = 258
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 155/263 (58%), Positives = 197/263 (74%), Gaps = 12/263 (4%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQL+S+LE+++M++N++KS + M+FK++H+ ++LNWP FLDNFAL+SG ++++
Sbjct: 1 MQREEKQLDSALEAIIMRVNDLKSAIAAMIFKLEHEYETLNWPNFLDNFALISGHLTSLS 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L HDK P +RNLTVLPL L+PE++EELLRLTEGR+P F HDLVPDYLRTK EP E K
Sbjct: 61 KILGHDKAPNLRNLTVLPLRLSPEKDEELLRLTEGRIPTFAHDLVPDYLRTKVEPQAEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
++QLE KAA+L+Y+ + KQ A + KVI HV DI +KAREEWESEAG+R QTSS DT
Sbjct: 121 MMQLEAKAANLNYETSHKQVAQYTKVINHVWDIANKAREEWESEAGSRATQAQTSSTADT 180
Query: 181 HSLVAAVGMGRGLK-----MIMPGPGAPVGPGMMVAPGGPG-RPVGPGPGMPMGPGGQPM 234
H+LVAAVGMG+GLK M+ G + V GM+V G PG + PG G G M
Sbjct: 181 HALVAAVGMGKGLKSDSVQMVQSGVNS-VPSGMIV--GRPGNQQQTPGQG---SLGNPSM 234
Query: 235 GMMGKNPSGIKTNIKAAAAIHPY 257
G M K PS IKTNIKAA IHPY
Sbjct: 235 GQMTKAPSTIKTNIKAAPQIHPY 257
>gi|383848111|ref|XP_003699695.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like isoform 1 [Megachile rotundata]
Length = 261
Score = 309 bits (792), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 150/266 (56%), Positives = 196/266 (73%), Gaps = 15/266 (5%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQL+S+LE+++MK+N++K+ + M+FK++H+ ++LNWP FLDNFAL+SG ++++
Sbjct: 1 MQREEKQLDSALEAIIMKVNDLKTAIAAMIFKLEHEYETLNWPNFLDNFALISGHLTSLS 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L HDK P +RNLTVLPL L+PE++E+LLRLTEGR+ F HDLVPDYLRTK EP E K
Sbjct: 61 KILGHDKAPNLRNLTVLPLRLSPEKDEDLLRLTEGRISTFAHDLVPDYLRTKVEPQAEQK 120
Query: 121 LIQLEHKAASLSYDAAQ---KQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSL 177
++QLE KAA+L+Y+ + KQ + KVI+HV DI +KAREEWESE+G+R QTSS
Sbjct: 121 MMQLEAKAANLNYETSHDCNKQVTQYTKVISHVWDIANKAREEWESESGSRAAQAQTSST 180
Query: 178 TDTHSLVAAVGMGRGLK-----MIMPGPGAPVGPGMMVA-PGGPGRPVGPGPGMPMGPGG 231
DTH+LVAAVG+G+GLK M+ G + V GMMV PG + G G G
Sbjct: 181 ADTHALVAAVGIGKGLKSDSVPMVQSGVNS-VSSGMMVGRPGSQQQNSGQGT-----LGN 234
Query: 232 QPMGMMGKNPSGIKTNIKAAAAIHPY 257
MG MGK PS IKTNIKAA+ IHPY
Sbjct: 235 SSMGQMGKAPSTIKTNIKAASQIHPY 260
>gi|328793569|ref|XP_623274.2| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform 1 [Apis mellifera]
Length = 263
Score = 309 bits (792), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 155/266 (58%), Positives = 198/266 (74%), Gaps = 16/266 (6%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQL+S+LE+++M++N++KS + M+FK++H+ ++LNWP FLDNFAL+SG ++++
Sbjct: 4 MQREEKQLDSALEAIIMRVNDLKSAIAAMIFKLEHEYETLNWPNFLDNFALISGHLTSLS 63
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L HDK P +RNLTVLPL L+PE++EELLRLTEGR+P F HDLVPDYLRTK EP E K
Sbjct: 64 KILGHDKAPNLRNLTVLPLRLSPEKDEELLRLTEGRIPTFAHDLVPDYLRTKVEPQAEQK 123
Query: 121 LIQLEHKAASLSYDAAQ---KQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSL 177
++QLE KAA+L+Y+ + KQ A + KVI HV DI +KAREEWESEAG+R QTSS
Sbjct: 124 MMQLEAKAANLNYETSHDCNKQVAQYTKVINHVWDIANKAREEWESEAGSRATQAQTSST 183
Query: 178 TDTHSLVAAVGMGRGLK-----MIMPGPGAPVGPGMMVAPGGPG-RPVGPGPGMPMGPGG 231
DTH+LVAAVGMG+GLK M+ G + V GM+V G PG + PG + G
Sbjct: 184 ADTHALVAAVGMGKGLKSDSVQMVQSGVNS-VPSGMIV--GRPGNQQQTPGQSL----GN 236
Query: 232 QPMGMMGKNPSGIKTNIKAAAAIHPY 257
PMG M K PS IKTNIKAA IHPY
Sbjct: 237 PPMGQMTKAPSTIKTNIKAAPQIHPY 262
>gi|340720811|ref|XP_003398823.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Bombus terrestris]
Length = 261
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/267 (56%), Positives = 196/267 (73%), Gaps = 17/267 (6%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQL+S+LE+++M++N++K+ + M+FK++H+ ++LNWP FLDNFAL+SG ++++
Sbjct: 1 MQREEKQLDSALEAIIMRVNDLKTAIAAMIFKLEHEYETLNWPNFLDNFALISGHLTSLS 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+ HDK P +RNLTVLPL L+PE++EELLRLTEGR+P F HDLVPDYLRTK EP E K
Sbjct: 61 KIFGHDKAPNLRNLTVLPLRLSPEKDEELLRLTEGRIPTFAHDLVPDYLRTKVEPQAEQK 120
Query: 121 LIQLEHKAAS----LSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSS 176
++QLE KAA+ +S+D KQ + + KVI +V DI +KAREEWESEAG+R QTSS
Sbjct: 121 MMQLETKAANTSTEMSHD-CNKQMSQYTKVINNVWDIANKAREEWESEAGSRATQAQTSS 179
Query: 177 LTDTHSLVAAVGMGRGLK-----MIMPGPGAPVGPGMMVAPGGPG-RPVGPGPGMPMGPG 230
DTH+LVAAVGMG+GLK M+ G + V GMMV G PG + PG G G
Sbjct: 180 TADTHALVAAVGMGKGLKSDSVQMVQSGVNS-VPSGMMV--GRPGNQQQAPGQG---SLG 233
Query: 231 GQPMGMMGKNPSGIKTNIKAAAAIHPY 257
MG M K PS IKTNIKAA+ IHPY
Sbjct: 234 NPSMGQMSKAPSAIKTNIKAASQIHPY 260
>gi|332017622|gb|EGI58319.1| Mediator of RNA polymerase II transcription subunit 8 [Acromyrmex
echinatior]
Length = 258
Score = 299 bits (766), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/263 (55%), Positives = 189/263 (71%), Gaps = 12/263 (4%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQ +S+LE+++M++N++K+ + M+FK++H+ ++LNWP FLDNFAL+SG ++++
Sbjct: 1 MQREEKQQDSALEAIIMRVNDLKNAISAMIFKVEHEYETLNWPNFLDNFALISGHLTSLS 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL HDK +R LTVLPL L+PE++EELLRLTE R+P F HDLVPDYLRTK EP E K
Sbjct: 61 KVLGHDKALNLRGLTVLPLRLSPEKDEELLRLTENRIPTFAHDLVPDYLRTKLEPQAEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
++QLE KAA+++ D + KQ A + KVI+HV DI +KARE+WE E R QTSS DT
Sbjct: 121 MMQLEAKAANVNIDTSHKQLAQYTKVISHVWDIANKAREDWEGEVSTRATQAQTSSAADT 180
Query: 181 HSLVAAVGMGRGLK-----MIMPGPGAPVGPGMMVA-PGGPGRPVGPGPGMPMGPGGQPM 234
H+L+AAVGMG+GLK M+ G PV MMV PG + G GP G PM
Sbjct: 181 HALLAAVGMGKGLKSDSIQMVQSGVN-PVTNNMMVGRPGNQQQTTGQGP-----LGNPPM 234
Query: 235 GMMGKNPSGIKTNIKAAAAIHPY 257
G M K PS IKTNIKAA+ IHPY
Sbjct: 235 GQMNKAPSAIKTNIKAASQIHPY 257
>gi|345493857|ref|XP_003427165.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform 2 [Nasonia vitripennis]
Length = 255
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/264 (55%), Positives = 190/264 (71%), Gaps = 14/264 (5%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQL+S+LE+++M++N++KS + M+FK++H+ ++LNWP FLDNFAL+SG ++++
Sbjct: 1 MQREEKQLDSALEAIIMRVNDLKSAIASMIFKVEHEYETLNWPNFLDNFALISGHLTSLS 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+LS++K P +RNLTVLPL L+PE++EELLR+TEGR+ F HDLVPDYLRTK +P VE K
Sbjct: 61 KILSNEKAPNLRNLTVLPLHLSPEKDEELLRMTEGRISTFAHDLVPDYLRTKPDPLVESK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
++ E K A+L+YDA+ KQ A +NKVI HV DI +KAREEWESE G+R QTSS DT
Sbjct: 121 MLAYEAKVANLTYDASHKQVAQYNKVINHVWDIANKAREEWESETGSRTTQTQTSSSADT 180
Query: 181 HSLVAAVGMGRGLK-----MIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMG 235
H LV AVG G+GLK M+ PG VG MMV G M +G
Sbjct: 181 HLLVYAVGNGKGLKSDAAQMVQPGVN-QVGGNMMVGRPGGQPQQPGQGPM--------VG 231
Query: 236 MMGKNPSGIKTNIKAAAAIHPYSR 259
MGK PS IKTNIKAA+ IHPY R
Sbjct: 232 QMGKAPSAIKTNIKAASQIHPYGR 255
>gi|326320054|ref|NP_001191894.1| mediator of RNA polymerase II transcription subunit 8
[Acyrthosiphon pisum]
Length = 249
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/259 (59%), Positives = 195/259 (75%), Gaps = 13/259 (5%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQRE+KQLE LE+ KLNE K+Q+ ++FK++H+RD++NW T LD FA+ S Q++AI
Sbjct: 1 MQREDKQLELVLENFQSKLNEFKAQIYALIFKLEHERDNVNWTTVLDTFAVFSTQYTAIM 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K LS++K P +RN +VLPL+LNPER+E+L R+TE RVPA +HD+VPD+LRTK EP+VEHK
Sbjct: 61 KYLSYEKLPQLRNYSVLPLMLNPERDEDLARITENRVPALSHDIVPDFLRTKTEPEVEHK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
L+Q+EHKA L ++ AQKQ A FNKV+ HVLD+VSKAREEWE E GAR G GQTSS+ D
Sbjct: 121 LMQVEHKAGGLQFETAQKQLAAFNKVVNHVLDLVSKAREEWEVETGARVGIGQTSSVADL 180
Query: 181 HSLVAAVGMGRGLKMIMP--GPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMG 238
H+LV+AV MG+ LK ++P PG GMMV P GRPV P MGP PMGMM
Sbjct: 181 HTLVSAVSMGKNLKPMVPQVSPG-----GMMVPPT--GRPVTPS----MGPNTPPMGMMP 229
Query: 239 KNPSGIKTNIKAAAAIHPY 257
K P G+KTN+KAA A HPY
Sbjct: 230 KPPPGMKTNVKAAGAPHPY 248
>gi|345493859|ref|XP_001608087.2| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform 1 [Nasonia vitripennis]
Length = 258
Score = 292 bits (748), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 147/267 (55%), Positives = 190/267 (71%), Gaps = 17/267 (6%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQL+S+LE+++M++N++KS + M+FK++H+ ++LNWP FLDNFAL+SG ++++
Sbjct: 1 MQREEKQLDSALEAIIMRVNDLKSAIASMIFKVEHEYETLNWPNFLDNFALISGHLTSLS 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+LS++K P +RNLTVLPL L+PE++EELLR+TEGR+ F HDLVPDYLRTK +P VE K
Sbjct: 61 KILSNEKAPNLRNLTVLPLHLSPEKDEELLRMTEGRISTFAHDLVPDYLRTKPDPLVESK 120
Query: 121 LIQLEHKAASLSYDAAQ---KQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSL 177
++ E K A+L+YDA+ KQ A +NKVI HV DI +KAREEWESE G+R QTSS
Sbjct: 121 MLAYEAKVANLTYDASHDYNKQVAQYNKVINHVWDIANKAREEWESETGSRTTQTQTSSS 180
Query: 178 TDTHSLVAAVGMGRGLK-----MIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQ 232
DTH LV AVG G+GLK M+ PG VG MMV G M
Sbjct: 181 ADTHLLVYAVGNGKGLKSDAAQMVQPGVN-QVGGNMMVGRPGGQPQQPGQGPM------- 232
Query: 233 PMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+G MGK PS IKTNIKAA+ IHPY R
Sbjct: 233 -VGQMGKAPSAIKTNIKAASQIHPYGR 258
>gi|307195666|gb|EFN77508.1| Mediator of RNA polymerase II transcription subunit 8 [Harpegnathos
saltator]
Length = 257
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 191/263 (72%), Gaps = 13/263 (4%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQR+EK L+S+LE+++M++N++KS + M+FK++H+ ++LNWP FLDN+AL+SG ++++
Sbjct: 1 MQRDEKHLDSALEAIIMRVNDLKSAIAAMVFKLEHEYETLNWPNFLDNYALISGHLTSLS 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L+ DK P +RN TVLPL L+PE++EELLRLTEGR+P F HDLVPDYLRTK EP E K
Sbjct: 61 KILAPDKAPNLRNYTVLPLRLSPEKDEELLRLTEGRIPTFAHDLVPDYLRTKLEPQAEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
++Q E K A+++ DA+ KQ ++KV+ HV D+ +KAREEWESEAGAR QT+S DT
Sbjct: 121 MMQFEAK-ANVNNDASHKQLMQYSKVVGHVWDMTNKAREEWESEAGARATQAQTNSAADT 179
Query: 181 HSLVAAVGMGRGLK-----MIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGP-GGQPM 234
H+LVAAVGMG+GLK M+ G PV MMV GRP GP G P+
Sbjct: 180 HTLVAAVGMGKGLKSDSIQMVQSGVN-PVANSMMV-----GRPSNQQQTPGQGPLGNPPL 233
Query: 235 GMMGKNPSGIKTNIKAAAAIHPY 257
G + K P IKTNIKAA+ IHPY
Sbjct: 234 GQINKAPGAIKTNIKAASQIHPY 256
>gi|125809534|ref|XP_001361157.1| GA12583 [Drosophila pseudoobscura pseudoobscura]
gi|195154871|ref|XP_002018336.1| GL16821 [Drosophila persimilis]
gi|54636331|gb|EAL25734.1| GA12583 [Drosophila pseudoobscura pseudoobscura]
gi|194114132|gb|EDW36175.1| GL16821 [Drosophila persimilis]
Length = 252
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/259 (52%), Positives = 186/259 (71%), Gaps = 7/259 (2%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEK E +L++V+ +LN++K ++ M+ K++ + +++NWPTFLDNFA++S + +
Sbjct: 1 MQREEKHFEMTLDAVLQRLNDLKLAVLAMIQKLEMEYETINWPTFLDNFAIISSHLTGLT 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L+ ++ PP+RN TVLPL+++ +R+E L+ +TEGRVP F+HD+VPDYLRT+ +P E K
Sbjct: 61 KILAKEQCPPLRNRTVLPLLVSMDRDETLINITEGRVPVFSHDIVPDYLRTRPDPLTEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+ E KAA+L+ DAA KQ +NKV++HVLD+VSKAREEWE E+ +R G QTSS+ DT
Sbjct: 121 MQANEQKAANLTNDAAMKQVTQYNKVVSHVLDMVSKAREEWEIESSSRTGIQQTSSMADT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKN 240
LVAAVGMG+GLKM GP GPGMMV P R P G M PG +GK
Sbjct: 181 QLLVAAVGMGKGLKMTNYGP----GPGMMVPPS--IRASSPMGGPAMSPGN-VQQQLGKA 233
Query: 241 PSGIKTNIKAAAAIHPYSR 259
PS +KTNIKAA +HP+SR
Sbjct: 234 PSAVKTNIKAANQVHPFSR 252
>gi|195336084|ref|XP_002034677.1| GM19790 [Drosophila sechellia]
gi|195585075|ref|XP_002082320.1| GD25282 [Drosophila simulans]
gi|194126647|gb|EDW48690.1| GM19790 [Drosophila sechellia]
gi|194194329|gb|EDX07905.1| GD25282 [Drosophila simulans]
Length = 252
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/259 (51%), Positives = 188/259 (72%), Gaps = 7/259 (2%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQR+EK E +LE+V+ +LN++K ++ M+ K++ + +++NWPTFLDNFA++S + +
Sbjct: 1 MQRDEKLFELTLETVLQRLNDLKLAVLSMIQKLELEYETINWPTFLDNFAIISSHLTGLT 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L+ ++ PP+RN TVLPL+++ +R++ L+ +TEGRVP F+HD+VPDYLRT+ +P E K
Sbjct: 61 KILAKEQCPPLRNRTVLPLLVSMDRDDTLINITEGRVPVFSHDIVPDYLRTRPDPITEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
++Q E KAA+L+ DAA KQ +NKV++HVLD+VSKAREEWE E+ +R G QTSS+ DT
Sbjct: 121 MLQNEQKAANLTNDAAMKQVTQYNKVVSHVLDMVSKAREEWEIESSSRTGIQQTSSMADT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKN 240
LVAAVGMG+GLK+ GP GPGMMV P R P G M PG MGK
Sbjct: 181 QLLVAAVGMGKGLKLTNYGP----GPGMMVPPS--IRAPSPMGGPAMSPGNV-QQQMGKA 233
Query: 241 PSGIKTNIKAAAAIHPYSR 259
PS +KTNIK+A +HP+SR
Sbjct: 234 PSAVKTNIKSANQVHPFSR 252
>gi|289742961|gb|ADD20228.1| mediator complex subunit 8 [Glossina morsitans morsitans]
Length = 254
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 139/260 (53%), Positives = 190/260 (73%), Gaps = 7/260 (2%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE +LE+V+ +LN++K + M+ K++ + +++NWPTFLDNFAL+S + ++
Sbjct: 1 MQREEKQLEMTLEAVMNRLNDLKISIGAMVHKLETEYETINWPTFLDNFALISSHLTGLS 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+LS + P +RN TVLPL+++PER+E L+ LT+GRVP F+HD+VPDYLRTK +P E K
Sbjct: 61 KILSKEMCPLLRNRTVLPLMVSPERDELLVNLTQGRVPVFSHDIVPDYLRTKPDPMAEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+IQ E KAA+LS + A KQ +NKV++HVL++VSKAREEWE EA +R G QTSS+ DT
Sbjct: 121 MIQNEQKAANLSTETAVKQVTQYNKVVSHVLEMVSKAREEWEIEASSRPGIQQTSSMADT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVG-PGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGK 239
H+L AAVG G+GLK+ +P P G PG M+ P G P P + PGG + +GK
Sbjct: 181 HALAAAVGNGKGLKVGIPM-SVPGGVPGSMMVPPGIR---APSPMSSVSPGG--VSQLGK 234
Query: 240 NPSGIKTNIKAAAAIHPYSR 259
PS IKTNIK+A +HP+SR
Sbjct: 235 APSAIKTNIKSAMQVHPFSR 254
>gi|194881561|ref|XP_001974899.1| GG20865 [Drosophila erecta]
gi|195486901|ref|XP_002091698.1| Arc32 [Drosophila yakuba]
gi|190658086|gb|EDV55299.1| GG20865 [Drosophila erecta]
gi|194177799|gb|EDW91410.1| Arc32 [Drosophila yakuba]
Length = 252
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 133/259 (51%), Positives = 188/259 (72%), Gaps = 7/259 (2%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQR+EK E +LE+V+ +LN++K ++ M+ K++ + +++NWPTFLDNFA++S + +
Sbjct: 1 MQRDEKLFELTLETVLQRLNDLKLAVLSMIQKLELEYETINWPTFLDNFAIISSHLTGLT 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L+ ++ PP+RN TVLPL+++ +R++ L+ +TEGRVP F+HD+VPDYLRT+ +P E K
Sbjct: 61 KILAKEQCPPLRNRTVLPLLVSMDRDDTLINITEGRVPVFSHDIVPDYLRTRPDPITEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
++Q E KAA+L+ DAA KQ +NKV++HVLD+VSKAREEWE E+ +R G QTSS+ DT
Sbjct: 121 MLQNEQKAANLTNDAAMKQVTQYNKVVSHVLDMVSKAREEWEIESSSRTGIQQTSSMADT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKN 240
LVAAVGMG+GLK+ GP GPGMMV P R P G M PG +GK
Sbjct: 181 QLLVAAVGMGKGLKLTNYGP----GPGMMVPPS--IRAPSPMGGPAMSPGNV-QQQLGKA 233
Query: 241 PSGIKTNIKAAAAIHPYSR 259
PS +KTNIK+A +HP+SR
Sbjct: 234 PSAVKTNIKSANQVHPFSR 252
>gi|24415388|ref|NP_722456.1| mediator complex subunit 8 [Drosophila melanogaster]
gi|158514037|sp|A1ZBT5.1|MED8_DROME RecName: Full=Mediator of RNA polymerase II transcription subunit
8; AltName: Full=Mediator complex subunit 8
gi|21626912|gb|AAM68406.1| mediator complex subunit 8 [Drosophila melanogaster]
gi|211938633|gb|ACJ13213.1| FI07210p [Drosophila melanogaster]
Length = 252
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/259 (50%), Positives = 188/259 (72%), Gaps = 7/259 (2%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQR+EK E +L++V+ +LN++K ++ M+ K++ + +++NWPTFLDNFA++S + +
Sbjct: 1 MQRDEKLFELTLDTVLQRLNDLKLAVLSMIQKLELEYETINWPTFLDNFAIISSHLTGLT 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L+ ++ PP+RN TVLPL+++ +R++ L+ +TEGRVP F+HD+VPDYLRT+ +P E K
Sbjct: 61 KILAKEQCPPLRNRTVLPLLVSMDRDDTLINITEGRVPVFSHDIVPDYLRTRPDPITEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
++Q E KAA+L+ DAA KQ +NKV++HVLD+VSKAREEWE E+ +R G QTSS+ DT
Sbjct: 121 MLQNEQKAANLTNDAAMKQVTQYNKVVSHVLDMVSKAREEWEIESSSRTGIQQTSSMADT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKN 240
LVAAVGMG+GLK+ GP GPGMMV P R P G M PG +GK
Sbjct: 181 QLLVAAVGMGKGLKLTNYGP----GPGMMVPPS--IRAPSPMGGPAMSPGNV-QQQLGKA 233
Query: 241 PSGIKTNIKAAAAIHPYSR 259
PS +KTNIK+A +HP+SR
Sbjct: 234 PSAVKTNIKSANQVHPFSR 252
>gi|194753446|ref|XP_001959023.1| GF12669 [Drosophila ananassae]
gi|190620321|gb|EDV35845.1| GF12669 [Drosophila ananassae]
Length = 251
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/261 (50%), Positives = 189/261 (72%), Gaps = 12/261 (4%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQR+EK E +L++V+ +LN++K ++ M+ K++ + +++NWPTFLDNFA++S + +
Sbjct: 1 MQRDEKLFELTLDAVLQRLNDLKLAVLSMIQKLEMEYETINWPTFLDNFAIISSHLTGLT 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L+ ++ PP+RN TVLPL+++ +R++ L+ +TEGRVP F+HD+VPDYLRT+ +P E K
Sbjct: 61 KILAKEQCPPLRNRTVLPLMVSMDRDDTLINITEGRVPVFSHDIVPDYLRTRPDPITEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+ Q E KAA+L+ DAA KQ +NKV++HVLD+VSKAREEWE E+ +R G QTSS+ DT
Sbjct: 121 MQQNEQKAANLTNDAAMKQVTQYNKVVSHVLDMVSKAREEWEIESSSRTGIQQTSSMADT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPG--GPGRPVGPGPGMPMGPGGQPMGMMG 238
LVAAVGMG+GLK+ GPGMMV P P P+G GPG M PG +G
Sbjct: 181 QLLVAAVGMGKGLKL------TNYGPGMMVPPSIRAPS-PMG-GPG--MSPGNVQQQQLG 230
Query: 239 KNPSGIKTNIKAAAAIHPYSR 259
K PS +KTNIK+A +HP+SR
Sbjct: 231 KAPSAVKTNIKSANQVHPFSR 251
>gi|195123039|ref|XP_002006017.1| GI18776 [Drosophila mojavensis]
gi|193911085|gb|EDW09952.1| GI18776 [Drosophila mojavensis]
Length = 256
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 189/264 (71%), Gaps = 13/264 (4%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEK E +L++++ +LN++K ++ M+ K++ + +NWPTFLDNFA++S + +
Sbjct: 1 MQREEKHFEMTLDAILQRLNDLKLAVLSMIQKLEMEYMDINWPTFLDNFAIISSHLTGLT 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L+ ++ PP+RN TVLPL+++ +R+E L+ +TEGRVP F+HD+VPDYLRT+ +P E K
Sbjct: 61 KILAKEQCPPLRNRTVLPLLVSMDRDETLVNITEGRVPVFSHDIVPDYLRTRPDPITEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+ Q E KAA+L+ DAA KQ +NKV++HVLD+VSKAREEWE E+ +R G QTSS+TDT
Sbjct: 121 MQQNEQKAANLTNDAAMKQVTQYNKVVSHVLDMVSKAREEWEIESSSRTGIQQTSSMTDT 180
Query: 181 HSLVAAVGMGRGLKMIM---PGPGAPVGPGMMVAPG--GPGRPVGPGPGMPMGPGGQPMG 235
LVA VGMG+GL+ PGP GPGMMV P GP P+G GP M G Q
Sbjct: 181 QLLVATVGMGKGLQYKANYGPGP----GPGMMVPPSIRGPTPPMG-GPSMSPGNVQQ--- 232
Query: 236 MMGKNPSGIKTNIKAAAAIHPYSR 259
+GK PS +KTNIK+A +HP+SR
Sbjct: 233 QLGKAPSAVKTNIKSANQVHPFSR 256
>gi|195382219|ref|XP_002049828.1| GJ21803 [Drosophila virilis]
gi|194144625|gb|EDW61021.1| GJ21803 [Drosophila virilis]
Length = 256
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 137/264 (51%), Positives = 188/264 (71%), Gaps = 13/264 (4%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEK E +L++VV +LN++K ++ M+ K++ + +NWPTFLDNFA++S + +
Sbjct: 1 MQREEKHFEMTLDAVVQRLNDLKLAVLSMIQKLEMEYMDINWPTFLDNFAIISSHLTGLT 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L+ ++ PP+RN TVLPL+++ +R+E L+ +TEGRVP F+HD+VPDYLRT+ +P E K
Sbjct: 61 KILAKEQCPPLRNRTVLPLLVSMDRDETLVNITEGRVPVFSHDIVPDYLRTRPDPITEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+ Q E KAA+L+ DAA KQ +NKV++HVLD+VSKAREEWE E+ +R G QTSS+ DT
Sbjct: 121 MQQNEQKAANLTNDAAMKQVTQYNKVVSHVLDMVSKAREEWEIESSSRTGIQQTSSMADT 180
Query: 181 HSLVAAVGMGRGLKMIM---PGPGAPVGPGMMVAPG--GPGRPVGPGPGMPMGPGGQPMG 235
LVA VGMG+GL+ PGP GPGMMV P GP P+G GP M G Q
Sbjct: 181 QLLVATVGMGKGLQYKANYGPGP----GPGMMVPPSIRGPTPPMG-GPSMSPGNVQQ--- 232
Query: 236 MMGKNPSGIKTNIKAAAAIHPYSR 259
+GK PS +KTNIK+A +HP+SR
Sbjct: 233 QLGKAPSAVKTNIKSANQVHPFSR 256
>gi|17945348|gb|AAL48730.1| RE16440p [Drosophila melanogaster]
Length = 252
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/259 (50%), Positives = 187/259 (72%), Gaps = 7/259 (2%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQR+EK E +L++V+ +LN++K ++ M+ K++ + +++NWPTFLDNFA++S + +
Sbjct: 1 MQRDEKLFELTLDTVLQRLNDLKLAVLSMIQKLELEYETINWPTFLDNFAIISSHLTGLT 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L+ ++ PP+RN TVLPL+++ +R++ L+ +TEGRVP F+HD+VPDYLRT+ +P E K
Sbjct: 61 KILAKEQCPPLRNRTVLPLLVSMDRDDTLINITEGRVPVFSHDIVPDYLRTRPDPITEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
++Q E KAA+L+ DAA KQ +NKV++HV D+VSKAREEWE E+ +R G QTSS+ DT
Sbjct: 121 MLQNEQKAANLTNDAAMKQVTQYNKVVSHVPDMVSKAREEWEIESSSRTGIQQTSSMADT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKN 240
LVAAVGMG+GLK+ GP GPGMMV P R P G M PG +GK
Sbjct: 181 QLLVAAVGMGKGLKLTNYGP----GPGMMVPPS--IRAPSPMGGPAMSPGNV-QQQLGKA 233
Query: 241 PSGIKTNIKAAAAIHPYSR 259
PS +KTNIK+A +HP+SR
Sbjct: 234 PSAVKTNIKSANQVHPFSR 252
>gi|195442039|ref|XP_002068768.1| GK17848 [Drosophila willistoni]
gi|194164853|gb|EDW79754.1| GK17848 [Drosophila willistoni]
Length = 251
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 129/259 (49%), Positives = 182/259 (70%), Gaps = 8/259 (3%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEK E +L++V+ +LN++K + M+ K++ + +++NWPTFLDNFA++S + +
Sbjct: 1 MQREEKHFEMTLDAVLQRLNDLKMAVFSMIQKLEMEYETINWPTFLDNFAIISSHLTGLT 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L+ ++ PP+RN TVLPL+++ ER++ L+ +TEGRVP F+HD+VPDYLRT+ +P E K
Sbjct: 61 KILAKEQCPPLRNRTVLPLLVSMERDDALINITEGRVPVFSHDIVPDYLRTRPDPITEQK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+ Q E KAA+L+ DAA KQ +NKV++HVLD+V+KAREEWE E+ +R G QTSS+TDT
Sbjct: 121 MQQNEQKAANLTNDAAMKQVTQYNKVVSHVLDMVTKAREEWEIESSSRTGIQQTSSMTDT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKN 240
LVAAVGMG+GLKM GP MMV P P G G + +GK
Sbjct: 181 QLLVAAVGMGKGLKMTNYGP-------MMVPPSIRA-PSPMGGAGAGGMSPGNVQQLGKA 232
Query: 241 PSGIKTNIKAAAAIHPYSR 259
PS +KTNIK+A +HP+SR
Sbjct: 233 PSAVKTNIKSANQVHPFSR 251
>gi|357612497|gb|EHJ68031.1| hypothetical protein KGM_04268 [Danaus plexippus]
Length = 248
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 138/261 (52%), Positives = 181/261 (69%), Gaps = 15/261 (5%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE++L +++ ++N++K+ + ++ K++ + +++NWPTFLDN+A+LSG + ++
Sbjct: 1 MQREEKQLEATLHAILNRVNDLKTAIQALITKLETEYETINWPTFLDNYAILSGHLTGLS 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L + P +R++ VLPL L ER+EEL RL+EGRVPA THDLVPD LRTK EP E +
Sbjct: 61 KILQAELAPSLRSVVVLPLQLGCERDEELARLSEGRVPACTHDLVPDLLRTKPEPQAEQR 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
L QL HKA +LSYD AQKQ A F KV++HV +I+SK RE+WE E+ G T S+ DT
Sbjct: 121 LQQLNHKANTLSYDTAQKQVAQFTKVVSHVWEIISKGREDWEGESMRSAGMQPTHSIADT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVG--PGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMG 238
H+LV AVG G+GL+ MP P P G PGM GP R GP MGP QP M
Sbjct: 181 HALVTAVGTGKGLRPGMP-PMVPQGVPPGM-----GPAR----GPTPQMGP-AQP--TMP 227
Query: 239 KNPSGIKTNIKAAAAIHPYSR 259
K PS IKTNIKAA IHPY R
Sbjct: 228 KAPSAIKTNIKAANQIHPYQR 248
>gi|58387964|ref|XP_315939.2| AGAP005909-PA [Anopheles gambiae str. PEST]
gi|74802745|sp|Q7Q6D6.2|MED8_ANOGA RecName: Full=Mediator of RNA polymerase II transcription subunit
8; AltName: Full=Mediator complex subunit 8
gi|55238721|gb|EAA11644.2| AGAP005909-PA [Anopheles gambiae str. PEST]
Length = 249
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/261 (50%), Positives = 179/261 (68%), Gaps = 17/261 (6%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQL+ LE+V+ +LN++K + M+ +++ + +++NWPTFLDNFAL+S + +
Sbjct: 1 MQREEKQLDMLLEAVLNRLNDLKHSIGVMIHRLETEYETINWPTFLDNFALISSHLTGLM 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+LS + P+RNLTVLPL+L PER+E LL+LTEGRVP F+HDL PDYLRTK +P E +
Sbjct: 61 KILSTEIGTPLRNLTVLPLMLTPERDEALLQLTEGRVPIFSHDLAPDYLRTKPDPGAESR 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
E KA +L+ +A+ KQ A +NKVI+HV DI+SKA+E+WE+E+ R G QTSS+ DT
Sbjct: 121 QAAHEAKANNLTVEASMKQVAQYNKVISHVWDIISKAKEDWENESSTRPGIQQTSSMADT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAP----GGPGRPVGPGPGMPMGPGGQPMGM 236
+LVAAVG+G GL + G P G G+M+ P G P V P P
Sbjct: 181 QALVAAVGLGNGLTAPV---GPPTGAGVMIPPAIRQGSPMSAVSPSGNAP---------- 227
Query: 237 MGKNPSGIKTNIKAAAAIHPY 257
MGK PSGIKTNIK+A +HPY
Sbjct: 228 MGKMPSGIKTNIKSANQVHPY 248
>gi|195028819|ref|XP_001987273.1| GH20059 [Drosophila grimshawi]
gi|193903273|gb|EDW02140.1| GH20059 [Drosophila grimshawi]
Length = 256
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 128/260 (49%), Positives = 181/260 (69%), Gaps = 5/260 (1%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEK E +L++VV +LN++K ++ M+ K++ + +NWPTFLDNFA++S + +
Sbjct: 1 MQREEKHFEMTLDAVVQRLNDLKLAVLSMIQKLEMEYMDINWPTFLDNFAIISSHLTGLT 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L+ ++ PP+RN TVLPL++ +R+E L+ +TEGRVP F+HD+VPDYLRT+ +P E K
Sbjct: 61 KILAKEQCPPLRNRTVLPLLVAMDRDETLVNITEGRVPVFSHDIVPDYLRTRPDPITETK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+ Q E KAA+L+ DAA KQ +NKV++HVL++VSKAREEWE E+ +R G QTSS+TDT
Sbjct: 121 MQQNEQKAANLTNDAAMKQVTQYNKVVSHVLEMVSKAREEWEIESSSRTGIQQTSSMTDT 180
Query: 181 HSLVAAVGMGRGLKM-IMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGK 239
LVAAVGMG+GL+ G + + G P+G GP M G Q +GK
Sbjct: 181 QLLVAAVGMGKGLQFKTYGPGPGGPGMMVPPSIRGQTPPMG-GPSMSPGNVQQ---QLGK 236
Query: 240 NPSGIKTNIKAAAAIHPYSR 259
PS +KTNIK+A +HP+SR
Sbjct: 237 APSAVKTNIKSANQVHPFSR 256
>gi|157127607|ref|XP_001661113.1| mediator complex, subunit, putative [Aedes aegypti]
gi|121955130|sp|Q16RR7.1|MED8_AEDAE RecName: Full=Mediator of RNA polymerase II transcription subunit
8; AltName: Full=Mediator complex subunit 8
gi|108872899|gb|EAT37124.1| AAEL010861-PA [Aedes aegypti]
Length = 250
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 139/261 (53%), Positives = 184/261 (70%), Gaps = 16/261 (6%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQ++ LE+V+ +LN++K + M+ +++ + +++NWPTFLDNFAL+SG + ++
Sbjct: 1 MQREEKQMDMLLEAVLNRLNDLKHSIGAMIHRLETEYETINWPTFLDNFALISGHLTGLS 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+LS + P+RNLTVLPL+L PER+E LL+LTEGR+P F+HDLVPDYLRTK +P E +
Sbjct: 61 KILSSEIGTPLRNLTVLPLLLTPERDEALLQLTEGRIPIFSHDLVPDYLRTKPDPGAESR 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+ E KA +L D A KQ A +NKVI+HV DIVSKAREEW++EA +R G QTSSL DT
Sbjct: 121 MAAHEAKANNLQPDTAAKQVAQYNKVISHVWDIVSKAREEWDTEASSRPGIQQTSSLADT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAP----GGPGRPVGPGPGMPMGPGGQPMGM 236
+LVAAVG+G GL M + GPG G+M+ P P V PG G P+G
Sbjct: 181 QALVAAVGVGNGLTMPV-GPGGVPNAGIMIPPAIRQASPMSAVSPGAG--------PLGK 231
Query: 237 MGKNPSGIKTNIKAAAAIHPY 257
M PSGIKTNIK+A +HPY
Sbjct: 232 M---PSGIKTNIKSANQVHPY 249
>gi|312379093|gb|EFR25485.1| hypothetical protein AND_09147 [Anopheles darlingi]
Length = 807
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 129/257 (50%), Positives = 172/257 (66%), Gaps = 7/257 (2%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE L++ + +LNE+K + M+ +++ + +S+ WPTFLDNFAL+SGQ + +
Sbjct: 557 MQREEKQLEMLLDAAISRLNELKVSISTMIHRVETESESIYWPTFLDNFALISGQLTGLM 616
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+LS + P+RNL VLPL+L+ ER+E LL+LTEGR+P F+H+L PDYLRTK +P E +
Sbjct: 617 KLLSGEIGTPLRNLAVLPLMLSLERDETLLQLTEGRIPVFSHELAPDYLRTKPDPGAESR 676
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
L E KA +L ++AA KQAA F KVI HV DI+ KA+E+WESE+ +R G QTSS+ DT
Sbjct: 677 LAAHEAKANNLLHEAAIKQAAQFAKVIAHVWDILGKAKEDWESESSSRPGIQQTSSMADT 736
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKN 240
+LVAAVG+G GL + P P P + P G P+G M
Sbjct: 737 QALVAAVGLGAGLAV----PPQVGPGMGPGGIMIPPNIRQNSPLSAISPSGAPLGKM--- 789
Query: 241 PSGIKTNIKAAAAIHPY 257
PSGIKTNIK+A IHPY
Sbjct: 790 PSGIKTNIKSANQIHPY 806
>gi|62860054|ref|NP_001016614.1| mediator of RNA polymerase II transcription subunit 8 [Xenopus
(Silurana) tropicalis]
gi|123884345|sp|Q08BU1.1|MED8_XENTR RecName: Full=Mediator of RNA polymerase II transcription subunit
8; AltName: Full=Mediator complex subunit 8
gi|115529013|gb|AAI24563.1| mediator of RNA polymerase II transcription, subunit 8 homolog
(yeast) [Xenopus (Silurana) tropicalis]
Length = 267
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 186/274 (67%), Gaps = 22/274 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+ L++++ ++++IK+ LVG + K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEACLDALISQVSDIKNSLVGFIHKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL ++KTP +RN ++PL+L+P+R+EE++RLTEGRVP F+H++VPD+LRTK +PDVE
Sbjct: 61 KVLKNEKTPLLRNQVIIPLLLSPDRDEEIMRLTEGRVPVFSHEVVPDHLRTKPDPDVEEL 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL +AA ++ +AAQKQ + NK+ +++LD +SK EE ESE G+ QT + TDT
Sbjct: 121 EKQLSAEAARITSEAAQKQVQSMNKMCSNLLDKISK--EERESELGSLRQNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIM-PGPGAPVGPG------MMVAPGGPGRPVGPGP--------GM 225
++LVAAV G+GL PG G P+ PG M+ G P+ P G+
Sbjct: 179 NALVAAVAFGKGLSNRRPPGQGGPMAPGQTGASSMLPNATGMQVPMSLPPNQQQQHMAGV 238
Query: 226 PMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
M G QP GK PS IKTNIK +A++HPY R
Sbjct: 239 SMSQGSQP----GKMPSSIKTNIK-SASMHPYQR 267
>gi|148237460|ref|NP_001088933.1| mediator of RNA polymerase II transcription subunit 8-A [Xenopus
laevis]
gi|82179233|sp|Q5HZZ6.1|MED8A_XENLA RecName: Full=Mediator of RNA polymerase II transcription subunit
8-A; AltName: Full=Mediator complex subunit 8-A
gi|57032606|gb|AAH88827.1| LOC496309 protein [Xenopus laevis]
Length = 268
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 184/275 (66%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+ L++++ ++++IK+ LVG + K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEACLDALISQVSDIKNSLVGFIHKLENEFDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL ++KTP +RN ++PL+L+P+R+EE++RLTEGRVP F+H++VPD+LRTK +PDVE
Sbjct: 61 KVLKNEKTPLLRNQVIIPLLLSPDRDEEIMRLTEGRVPVFSHEVVPDHLRTKPDPDVEEL 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL +AA ++ +AAQKQ + NK+ +++LD +SK EE ESE G+ QT + TDT
Sbjct: 121 EKQLSAEAARITTEAAQKQVQSMNKMCSNLLDKISK--EERESELGSLRQNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIM-PGPGAPVGPGMMVA----PGGPGRPVGPGP-----------G 224
++LVAAV G+GL PG G P+ PG A P G P G
Sbjct: 179 NALVAAVAFGKGLSNRRPPGQGGPMAPGQTGASGMLPSAAGMQQVPMSLQSNQQQQHMAG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M G QP GK PS IKTNIK +A++HPY R
Sbjct: 239 VSMSQGNQP----GKMPSSIKTNIK-SASMHPYQR 268
>gi|147904122|ref|NP_001086941.1| mediator of RNA polymerase II transcription subunit 8-B [Xenopus
laevis]
gi|82182360|sp|Q6DD30.1|MED8B_XENLA RecName: Full=Mediator of RNA polymerase II transcription subunit
8-B; AltName: Full=Mediator complex subunit 8-B
gi|50417674|gb|AAH77799.1| MGC80409 protein [Xenopus laevis]
Length = 269
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 183/276 (66%), Gaps = 24/276 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+ L++++ ++++IK+ LVG + K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEACLDALISQVSDIKNSLVGFIHKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL ++KTP +RN ++PL+L+P+R+EE++RLTEGRVP F+H++VPD+LRTK +PDVE
Sbjct: 61 KVLKNEKTPLLRNQVIIPLLLSPDRDEEIMRLTEGRVPVFSHEVVPDHLRTKPDPDVEEL 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
Q+ A L+ +AAQKQ + NK+ +++LD +SK EE ESE G+ QT + TDT
Sbjct: 121 EKQISADATRLTSEAAQKQVQSMNKMCSNLLDKISK--EERESELGSLRQNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIM-PGPGAPVGPGMMVA----PGGPGRPVGPGP------------ 223
++LVAAV G+GL PG G P+ PG A PG G P
Sbjct: 179 NALVAAVAFGKGLSNRRPPGQGGPMAPGQTGASGMIPGAAGMQQVPMSLSQNQQQQQHMA 238
Query: 224 GMPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
G+ M G QP GK PS IKTNIK +A++HPY R
Sbjct: 239 GVSMSQGSQP----GKMPSSIKTNIK-SASMHPYQR 269
>gi|312382154|gb|EFR27708.1| hypothetical protein AND_05262 [Anopheles darlingi]
Length = 268
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 176/280 (62%), Gaps = 36/280 (12%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSG------ 54
MQREEKQ E LE+V +LN++ + GM +++ + ++LNWPTFLDN+AL+SG
Sbjct: 1 MQREEKQFEMLLEAVQNRLNDLIHAIGGMTNRLETEYETLNWPTFLDNYALISGHVSCGG 60
Query: 55 ---------------QFSAIAKVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPA 99
Q + + K+LS + P+RNLTVLPL+L ER+E L +LT+GRV
Sbjct: 61 IAVPSISQLIRFLYPQVTGLMKILSSEIGTPLRNLTVLPLMLTQERDEALSQLTDGRVAM 120
Query: 100 FTHDLVPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKARE 159
F+HDL PDYLRTK +P E +L E KA +L+ +A KQ A +NKVI+HV DI++KA+E
Sbjct: 121 FSHDLAPDYLRTKPDPGAETRLAIHETKANNLTTEAGIKQVAQYNKVISHVWDILNKAKE 180
Query: 160 EWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPV 219
+WE+E+ R G QTSS+ DT +LVAAVG+G GL + PV P V P P
Sbjct: 181 DWENESSTRPGIQQTSSMADTQALVAAVGLGNGLTV-------PVVPNAGVIP-----PA 228
Query: 220 GPGPGMPMGPGGQPMGM--MGKNPSGIKTNIKAAAAIHPY 257
G G PMG P+G MGK PSGIKTNIKAA +HPY
Sbjct: 229 IRGQGPPMG-AIPPVGAAPMGKIPSGIKTNIKAANQVHPY 267
>gi|296207715|ref|XP_002750760.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform 1 [Callithrix jacchus]
Length = 268
Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 182/275 (66%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG P PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGTSGLQQVQMAGAPSQQQPILSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M P GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAPAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|403291911|ref|XP_003937005.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform 1 [Saimiri boliviensis boliviensis]
Length = 268
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 182/275 (66%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG P PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGTSGLQQVQMAGAPSQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M P GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAPTGQP----GKIPSGIKTNIK-SASMHPYQR 268
>gi|327270942|ref|XP_003220247.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Anolis carolinensis]
Length = 268
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/275 (46%), Positives = 183/275 (66%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE SLE+++ ++ ++K+ LV ++K++++ D L WP+ LDNFALLSGQ + +
Sbjct: 1 MQREEKQLELSLEALISQVADLKNSLVNFIYKLENEYDRLTWPSVLDNFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP +RN ++PL+L+P+R+EEL+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLLRNQVIIPLVLSPDRDEELMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + D AQKQ + NK+ +++L+ ++K E+ ESE+G QT + DT
Sbjct: 121 EKQLSTDAARIGADVAQKQIQSLNKMCSNLLEKINK--EDRESESGGIRQNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIM-PGPGAPV-----GPGMMVA----------PGGPGRPVGPGPG 224
++LVAAV G+GL PG PV G ++A PG PG+ G
Sbjct: 179 NALVAAVAFGKGLSNRRPPGVTGPVQSGQPGANSIIAGGSAMQQVQMPGAPGQTQPMLGG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GGQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMPQGGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|431910026|gb|ELK13113.1| Mediator of RNA polymerase II transcription subunit 8 [Pteropus
alecto]
Length = 334
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 180/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRSNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPG------------MMVAPGGPGRPVGPGPG 224
++LVAAV G+GL P GPG P PG + G P + G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGTSGLQQVQMTGAPSQQQSILSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|301780382|ref|XP_002925613.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Ailuropoda melanoleuca]
Length = 268
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 128/271 (47%), Positives = 181/271 (66%), Gaps = 15/271 (5%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLTTDAARVGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGM-MVAPGGPGRPV-----GPGPGMPMGPG 230
++LVAAV G+GL P GPG P PG V G G PG P+ G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTVLAGASGLQQVQMAGAPGQQQPLLSG 238
Query: 231 GQ--PMGMMGKNPSGIKTNIKAAAAIHPYSR 259
Q G GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQTGKMPSGIKTNIK-SASMHPYQR 268
>gi|114155155|ref|NP_064384.2| mediator of RNA polymerase II transcription subunit 8 isoform 1
[Mus musculus]
gi|31076773|sp|Q9D7W5.1|MED8_MOUSE RecName: Full=Mediator of RNA polymerase II transcription subunit
8; AltName: Full=Activator-recruited cofactor 32 kDa
component; Short=ARC32; AltName: Full=Mediator complex
subunit 8
gi|12843152|dbj|BAB25879.1| unnamed protein product [Mus musculus]
gi|18256897|gb|AAH21870.1| Mediator of RNA polymerase II transcription, subunit 8 homolog
(yeast) [Mus musculus]
gi|74150981|dbj|BAE27624.1| unnamed protein product [Mus musculus]
gi|74195103|dbj|BAE28295.1| unnamed protein product [Mus musculus]
gi|148698560|gb|EDL30507.1| mediator of RNA polymerase II transcription, subunit 8 homolog
(yeast), isoform CRA_b [Mus musculus]
gi|148698561|gb|EDL30508.1| mediator of RNA polymerase II transcription, subunit 8 homolog
(yeast), isoform CRA_c [Mus musculus]
Length = 268
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/275 (46%), Positives = 181/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLNQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPGDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGM-MVAPGGPGRPVGPGPGMP--------- 226
++LVAAV G+GL P GPG P PG + G G P PG P
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGASGLPQVQMPGAPNQQQPMLSG 238
Query: 227 --MGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|50751450|ref|XP_422404.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Gallus gallus]
Length = 268
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 185/276 (67%), Gaps = 25/276 (9%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE +LE+++ ++ ++K+ LV ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLELTLEALISQVADLKNSLVSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP +RN ++PL+L+P+R+EE++R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLLRNQVIIPLVLSPDRDEEIMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA +S D AQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLITDAARISPDGAQKQIQSLNKMCSNLLEKISK--EERESESGGLRQNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIM-PGPGAPV-----GPGMMVAPGGPGR---PVGPGP-------- 223
++LVAAV G+GL PG G V G G ++A G G P+ P
Sbjct: 179 NALVAAVAFGKGLSNRRPPGSGGSVQSGQPGAGAIIA-GASGMQQVPMSSAPAQQQPMLA 237
Query: 224 GMPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
G+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 238 GVQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|449508486|ref|XP_002188819.2| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Taeniopygia guttata]
Length = 331
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 127/273 (46%), Positives = 181/273 (66%), Gaps = 23/273 (8%)
Query: 3 REEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKV 62
REEKQLE +LE+++ ++ ++K+ LV ++K++++ D L WP+ LD+FALLSGQ + + KV
Sbjct: 66 REEKQLELTLEALISQVADLKNSLVSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLNKV 125
Query: 63 LSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLI 122
L H+KTP +RN ++PL+L+P+R+EE++R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 126 LKHEKTPLLRNQVIIPLVLSPDRDEEIMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEK 185
Query: 123 QLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTHS 182
QL AA +S DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT++
Sbjct: 186 QLITDAARISPDAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRQNKQTFNPADTNA 243
Query: 183 LVAAVGMGRGLKMIM-PGPGAPV-------------GPGMMVAP--GGPGRPVGPGPGMP 226
LVAAV G+GL PG GA V GM P G P + G+
Sbjct: 244 LVAAVAFGKGLSNRRPPGSGASVQSGQPGAAAIIAGASGMQQVPMTGAPAQQQPMLAGVQ 303
Query: 227 MGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
M P GQP GK PSGIKTNIK +A++HPY R
Sbjct: 304 MAPAGQP----GKMPSGIKTNIK-SASMHPYQR 331
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 24/148 (16%)
Query: 3 REEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKV 62
REEKQLE +LE+++ ++ ++K+ LV ++K++++ D L L G A +
Sbjct: 4 REEKQLELTLEALISQVADLKNSLVSFIYKLENEYDRLTC---------LGGAARARPE- 53
Query: 63 LSHDKTPPIRNLTVLPLILNPEREEEL-LRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKL 121
PP+ + +PL+ E++ EL L +V + LV + + E D
Sbjct: 54 ------PPLCR-SAVPLVAREEKQLELTLEALISQVADLKNSLVSFIYKLENEYD----- 101
Query: 122 IQLEHKAASLSYDAAQKQAATFNKVITH 149
+L + S+ Q T NKV+ H
Sbjct: 102 -RLTWPSVLDSFALLSGQLNTLNKVLKH 128
>gi|149693726|ref|XP_001498553.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like isoform 1 [Equus caballus]
Length = 268
Score = 229 bits (584), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 180/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG P PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAATILAGASGLQQVQMAGAPSQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|395857772|ref|XP_003801257.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Otolemur garnettii]
Length = 265
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/273 (46%), Positives = 182/273 (66%), Gaps = 22/273 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVA----------PGGPGRPVGPGPGMP 226
++LVAAV G+GL P GPG P G G ++A G P + G+
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQP-GAGTILAGASGLQQVQMAGAPSQQQPMLSGVQ 237
Query: 227 MGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 238 MAQAGQP----GKMPSGIKTNIK-SASMHPYQR 265
>gi|354481011|ref|XP_003502696.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Cricetulus griseus]
gi|344252017|gb|EGW08121.1| Mediator of RNA polymerase II transcription subunit 8 [Cricetulus
griseus]
Length = 268
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 180/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLNQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPG------------MMVAPGGPGRPVGPGPG 224
++LVAAV G+GL P GPG P PG + G P + G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGASGLQQVQMAGAPNQQQTMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|311259470|ref|XP_003128113.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Sus scrofa]
Length = 268
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 179/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE G QT + DT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESEGGGLRPNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG P PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTVLAGASGLQQVQMAGAPSQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|149035495|gb|EDL90176.1| mediator of RNA polymerase II transcription, subunit 8 homolog
(yeast) (predicted), isoform CRA_c [Rattus norvegicus]
gi|149035496|gb|EDL90177.1| mediator of RNA polymerase II transcription, subunit 8 homolog
(yeast) (predicted), isoform CRA_d [Rattus norvegicus]
Length = 268
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 180/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLNQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG P PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGASGLQQVQMAGAPNQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|297473275|ref|XP_002686484.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Bos taurus]
gi|296488971|tpg|DAA31084.1| TPA: mediator of RNA polymerase II transcription, subunit 8 homolog
(predicted)-like [Bos taurus]
Length = 268
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 126/275 (45%), Positives = 179/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GP P PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPAGSSGPSQPGQPGAGTVLAGASGLQQVQMAGAPNQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|410967028|ref|XP_003990025.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Felis catus]
Length = 268
Score = 226 bits (575), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 178/271 (65%), Gaps = 15/271 (5%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + D AQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADVAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGM-MVAPGGPGRPV-----GPGPGMPMGPG 230
++LVAAV G+GL P GPG P PG + G G P PM G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGASGLQQVQMAGAPSQQQPMLSG 238
Query: 231 GQ--PMGMMGKNPSGIKTNIKAAAAIHPYSR 259
Q G GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQTGKMPSGIKTNIK-SASMHPYQR 268
>gi|351696351|gb|EHA99269.1| Mediator of RNA polymerase II transcription subunit 8
[Heterocephalus glaber]
Length = 276
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 179/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
+ REEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 9 LSREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 68
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 69 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 128
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 129 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPADT 186
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG P PG G G P P G
Sbjct: 187 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGTSGLQQVQMAGTPSQQQPMLSG 246
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 247 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 276
>gi|345780925|ref|XP_853421.2| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Canis lupus familiaris]
Length = 268
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/275 (45%), Positives = 181/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPG---MMVAPGG------PGRPVGPGP---G 224
++LVAAV G+GL P GPG P PG ++ G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGPILAGASGLQQVQMAGAPSQQQPLLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQ GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQ----TGKMPSGIKTNIK-SASMHPYQR 268
>gi|417398104|gb|JAA46085.1| Putative mediator of rna polymerase ii transcription subunit 8
[Desmodus rotundus]
Length = 268
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/275 (44%), Positives = 178/275 (64%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + D AQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADVAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPG------------MMVAPGGPGRPVGPGPG 224
++LVAAV G+GL P GPG P PG + G P + G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGTGTILAGTSGLQQVQMTGAPSQQQSMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK P GIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPGGIKTNIK-SASMHPYQR 268
>gi|383412553|gb|AFH29490.1| mediator of RNA polymerase II transcription subunit 8 isoform 1
[Macaca mulatta]
gi|384940810|gb|AFI34010.1| mediator of RNA polymerase II transcription subunit 8 isoform 1
[Macaca mulatta]
Length = 268
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 179/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L + K++++ L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG P PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGTSGLQQVQMAGAPSQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|383412551|gb|AFH29489.1| mediator of RNA polymerase II transcription subunit 8 isoform 3
[Macaca mulatta]
Length = 301
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 179/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L + K++++ L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG P PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGTSGLQQVQMAGAPSQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|402854218|ref|XP_003891772.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Papio anubis]
Length = 301
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 179/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L + K++++ L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG P PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGTSGLQQVQMAGAPSQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|432104525|gb|ELK31143.1| Mediator of RNA polymerase II transcription subunit 8 [Myotis
davidii]
Length = 268
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/276 (44%), Positives = 180/276 (65%), Gaps = 25/276 (9%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + D AQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADVAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIMPG-------PGAPVGPGMMVA----------PGGPGRPVGPGP 223
++LVAAV G+GL P PG P G G ++A G P +
Sbjct: 179 NALVAAVAFGKGLSNWRPSGTSGSGQPGQP-GTGTILAGASGLQQVQMTGAPSQQQSILS 237
Query: 224 GMPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
G+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 238 GVQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|194665848|ref|XP_872460.3| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform 2 [Bos taurus]
Length = 268
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 179/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK +E ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--DERESESGGLRPNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GP P PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPAGSSGPSQPGQPGAGTVLAGASGLQQVQMAGAPNQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|332808688|ref|XP_003308080.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Pan troglodytes]
Length = 268
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 178/275 (64%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L + K++++ L WP+ LDNFALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDNFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQAGQPGAGTILAGTSGLQQVQMAGAPSQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|241748784|ref|XP_002412474.1| mediator of RNA polymerase II transcription subunit, putative
[Ixodes scapularis]
gi|215505959|gb|EEC15453.1| mediator of RNA polymerase II transcription subunit, putative
[Ixodes scapularis]
Length = 274
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 172/278 (61%), Gaps = 23/278 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
M+REEK L+ +L++++ + ++K+ + + K++ + ++L WP+ LD+FALLSGQ + +
Sbjct: 1 MEREEKALDIALDAMISRTQDLKNSIASFIVKLETEYETLQWPSVLDSFALLSGQLNTLL 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL +DKTPP+RN +LPL+LNPER+EEL +LTE R+ F H++VPDYLRTK +P++E
Sbjct: 61 KVLRNDKTPPLRNRILLPLLLNPERDEELAKLTENRIQFFNHEVVPDYLRTKPDPEIEAA 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+Q+ KA+ LS D AQKQ A NK +LD V +E WES +G RG QTSSL DT
Sbjct: 121 ELQVTSKASLLSLDTAQKQIAALNKAANTILDGVKNLQENWESNSGQRGTIAQTSSLQDT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMP-------------- 226
++L+AA+ +G+GL+ P G+P + G R G MP
Sbjct: 181 NALIAALSVGKGLR---PSLGSPKSQSPLPQVSGQQRG-GKAFAMPSLGYIKRFFTPVKV 236
Query: 227 ---MGPGGQPMGMM--GKNPSGIKTNIKAAAAIHPYSR 259
+ GQ + GK PS IKTNIK+A A HPY R
Sbjct: 237 NADLSGRGQASAVHPGGKMPSTIKTNIKSAGASHPYGR 274
>gi|7670534|dbj|BAA95113.1| unnamed protein product [Mus musculus]
Length = 278
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/285 (45%), Positives = 182/285 (63%), Gaps = 33/285 (11%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ ++ A
Sbjct: 1 MQREEKQLEASLDALLNQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNSFA 60
Query: 61 ----------KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLR 110
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LR
Sbjct: 61 LLSGQLNTLNKVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLR 120
Query: 111 TKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGG 170
TK +P+VE + QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G
Sbjct: 121 TKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRP 178
Query: 171 TGQTSSLTDTHSLVAAVGMGRGLKMIMP----GPGAPVGPGM-MVAPGGPGRPVGPGPGM 225
QT + DT++LVAAV G+GL P GPG P PG + G G P PG
Sbjct: 179 NKQTFNPGDTNALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGASGLPQVQMPGA 238
Query: 226 P-----------MGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
P M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 PNQQQPMLSGVQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 278
>gi|426218669|ref|XP_004003564.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Ovis aries]
Length = 272
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 178/274 (64%), Gaps = 23/274 (8%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
QREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + + K
Sbjct: 6 QREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLNK 65
Query: 62 VLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKL 121
VL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 66 VLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQE 125
Query: 122 IQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTH 181
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT+
Sbjct: 126 KQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPADTN 183
Query: 182 SLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---GM 225
+LVAAV G+GL P GP P PG G G P P G+
Sbjct: 184 ALVAAVAFGKGLSNWRPSGSSGPSQPGQPGAGTVLAGASGLQQVQIAGAPNQQQPMLSGV 243
Query: 226 PMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 244 QMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 272
>gi|397483409|ref|XP_003812895.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Pan paniscus]
Length = 301
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 178/275 (64%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L + K++++ L WP+ LDNFALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDNFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQAGQPGAGTILAGTSGLQQVQMAGAPSQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|332259185|ref|XP_003278668.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform 1 [Nomascus leucogenys]
Length = 268
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 180/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L + K++++ L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAP--VGPGMMVA----------PGGPGRPVGPGPG 224
++LVAAV G+GL P GPG P G G ++A G P + G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQAGAGTILAGTSGLQQVQMAGAPSQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M QP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQASQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|355557914|gb|EHH14694.1| hypothetical protein EGK_00662, partial [Macaca mulatta]
gi|355745218|gb|EHH49843.1| hypothetical protein EGM_00569, partial [Macaca fascicularis]
Length = 301
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 126/275 (45%), Positives = 179/275 (65%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
+QREEKQLE+SL++++ ++ ++K+ L + K++++ L WP+ LD+FALLSGQ + +
Sbjct: 1 VQREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG P PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGTSGLQQVQMAGAPSQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|348513639|ref|XP_003444349.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Oreochromis niloticus]
Length = 270
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 181/269 (67%), Gaps = 12/269 (4%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
QREEKQLE+S+ES++ ++ +K+ L ++K++++ + L WP+ LDNFALLSGQ + I K
Sbjct: 3 QREEKQLEASVESLISRVAHVKNALHSFIYKLENEYERLTWPSVLDNFALLSGQLNTINK 62
Query: 62 VLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKL 121
+L ++KTP RN ++PL+L+P+R+E+L +LTE RVP F+H++VPDYLRTK +P+VE +
Sbjct: 63 LLRNEKTPSFRNQVIIPLVLSPDRDEDLAKLTEQRVPVFSHEIVPDYLRTKPDPEVEEQE 122
Query: 122 IQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTH 181
L +AA + D AQKQ NK+ T +L+ +S RE+ ++E+ A + + + DT+
Sbjct: 123 KTLSTEAARIGPDVAQKQIQALNKLCTTLLEKLSNPREDRDAESAAMRQSKPSFNPADTN 182
Query: 182 SLVAAVGMGRGL-KMIMPGPGAP--VGPGMMVAPGGPGR---PVGPGPGMPMGPGG---- 231
+LV+AV G+GL K PGP AP G G M++ GGP +G G G G GG
Sbjct: 183 ALVSAVAFGKGLSKCRPPGPVAPGHQGQGSMMS-GGPTLQQVTIGGGSGQQAGMGGPVAQ 241
Query: 232 QPMGMMGKNPSGIKTNIKAAA-AIHPYSR 259
Q G GK PS IKTNIK+A+ ++HPY+R
Sbjct: 242 QQQGQTGKMPSSIKTNIKSASGSMHPYNR 270
>gi|326925226|ref|XP_003208820.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Meleagris gallopavo]
Length = 289
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/273 (45%), Positives = 179/273 (65%), Gaps = 23/273 (8%)
Query: 3 REEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKV 62
REEKQLE +LE+++ ++ ++K+ LV ++K++++ D L WP+ LD+FALLSGQ + + KV
Sbjct: 24 REEKQLELTLEALISQVADLKNSLVSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLNKV 83
Query: 63 LSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLI 122
L H+KTP +RN ++PL+L+P+R+EE++R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 84 LKHEKTPLLRNQVIIPLVLSPDRDEEIMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEK 143
Query: 123 QLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTHS 182
QL AA +S D AQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT++
Sbjct: 144 QLITDAARISPDGAQKQIQSLNKMCSNLLEKISK--EERESESGGLRQNKQTFNPTDTNA 201
Query: 183 LVAAVGMGRGLKMIM-PGPGAPVGPGM-------MVAPGGPGRPVGPGP--------GMP 226
LVAAV G+GL PG G V G A G P+ P G+
Sbjct: 202 LVAAVAFGKGLSNRRPPGSGGSVQSGQPGAAAIIAGASGMQQVPMSSAPAQQQPMLAGVQ 261
Query: 227 MGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ GQP GK PSGIKTNIK +A++HPY R
Sbjct: 262 IAQAGQP----GKMPSGIKTNIK-SASMHPYQR 289
>gi|157837979|ref|NP_963836.2| mediator of RNA polymerase II transcription subunit 8 isoform 4
[Homo sapiens]
gi|297665181|ref|XP_002810987.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform 1 [Pongo abelii]
gi|31076772|sp|Q96G25.2|MED8_HUMAN RecName: Full=Mediator of RNA polymerase II transcription subunit
8; AltName: Full=Activator-recruited cofactor 32 kDa
component; Short=ARC32; AltName: Full=Mediator complex
subunit 8
gi|21717644|gb|AAM76709.1|AF521562_1 mediator of RNA polymerase II transcription subunit MED8 [Homo
sapiens]
Length = 268
Score = 223 bits (567), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/275 (45%), Positives = 178/275 (64%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L + K++++ L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQAGQPGAGTILAGTSGLQQVQMAGAPSQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|346468013|gb|AEO33851.1| hypothetical protein [Amblyomma maculatum]
Length = 244
Score = 223 bits (567), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 164/260 (63%), Gaps = 17/260 (6%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
M+REEK L+ +L++++ + ++K+ + G + K++ + ++L WP+ L++FALLSGQ + +
Sbjct: 1 MEREEKALDVALDAMISRTQDLKNSIAGFIVKLETEYETLQWPSVLNSFALLSGQLNTLM 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL ++KTPP+RN +LP LNPER+EEL + TE R+ F H++VPDYLRTK +P+VE
Sbjct: 61 KVLRNEKTPPLRNRILLPXFLNPERDEELAKTTENRIQFFNHEVVPDYLRTKPDPEVEAT 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+Q+ KA +S DA QKQ A+ NK++ + ++ RE+WES + R QTSSL DT
Sbjct: 121 ELQINTKANQMSLDAGQKQIASLNKIVNTIETVLKTTREDWESTSSQRSALAQTSSLADT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGP-GMPMGPGGQPMGMMGK 239
++L+ A+ G+GL+ P G+P + P P P G M GK
Sbjct: 181 NALIGALSTGKGLR---PSLGSP-------------KSQSPLPTAQPRGAKAFSMHPTGK 224
Query: 240 NPSGIKTNIKAAAAIHPYSR 259
PS IKTNIK+A A HPY R
Sbjct: 225 MPSAIKTNIKSAGASHPYGR 244
>gi|155030190|ref|NP_443109.2| mediator of RNA polymerase II transcription subunit 8 isoform 3
[Homo sapiens]
gi|426329266|ref|XP_004025662.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Gorilla gorilla gorilla]
Length = 301
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/275 (45%), Positives = 178/275 (64%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L + K++++ L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG PG G G P P G
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQAGQPGAGTILAGTSGLQQVQMAGAPSQQQPMLSG 238
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|344287306|ref|XP_003415394.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Loxodonta africana]
Length = 347
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/275 (44%), Positives = 177/275 (64%), Gaps = 23/275 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
++REEKQLE+SL++++ + ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 80 LRREEKQLEASLDALLSQAADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQMNTLN 139
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 140 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 199
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + D AQKQ + NK+ +++L+ + K EE ESE+G QT + DT
Sbjct: 200 EKQLTTDAARIGADVAQKQIQSLNKMCSNLLEKIGK--EERESESGGLRQNKQTFNPADT 257
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPG------------MMVAPGGPGRPVGPGPG 224
++LVAAV G+GL P GPG P PG + G P + G
Sbjct: 258 NALVAAVAFGKGLSNWRPSGNSGPGQPGQPGAGTILAGASGLQQVQMAGAPSQQQSMLSG 317
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 318 VQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 347
>gi|321456710|gb|EFX67810.1| hypothetical protein DAPPUDRAFT_301758 [Daphnia pulex]
Length = 237
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/259 (45%), Positives = 173/259 (66%), Gaps = 22/259 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE++LE+++ ++N++K+ + +LF+++++ SL+WP+ LD++A++SGQ + +
Sbjct: 1 MQREEKQLEAALEALLQRINDLKTSIRTLLFRLENEYGSLSWPSVLDSYAVISGQMNTLL 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KV+ +DKTP +RNL VLPL+L+P+ +EEL + TEGRV AF+HD+ PD LRTK +PDVE +
Sbjct: 61 KVMKNDKTPLLRNLIVLPLVLSPDPDEELKQATEGRVVAFSHDITPDMLRTKPDPDVEQR 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
Q E +A + + AQKQ NKV+ HVL+ ++ +RE+WE+EA R T + DT
Sbjct: 121 QNQFEQRALQVPPETAQKQINAMNKVVNHVLEQITHSREDWENEATVRANAAHTCIIADT 180
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKN 240
H+L+AAVG+G+ LK + AP P GPGR PGP GK
Sbjct: 181 HALIAAVGLGKNLKTL--PTAAPTQP-------GPGR-AQPGPA------------PGKT 218
Query: 241 PSGIKTNIKAAAAIHPYSR 259
S IKT IKAA+ HPY+R
Sbjct: 219 TSTIKTTIKAASQAHPYNR 237
>gi|348553513|ref|XP_003462571.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Cavia porcellus]
Length = 268
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 122/278 (43%), Positives = 177/278 (63%), Gaps = 29/278 (10%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ + ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQAADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLK-------------------MIMPGPGAPVGPGMMVAPGGPGRPVGP 221
++LVAAV G+GL I+ G G + G P +
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGSGQPGQPGAGTILAGTS---GLQQVQMAGTPSQQQPM 235
Query: 222 GPGMPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
G+ M P GQP GK PSGIKTNIK +A++HPY R
Sbjct: 236 LSGVQMAPAGQP----GKMPSGIKTNIK-SASMHPYQR 268
>gi|12805663|gb|AAH02315.1| Med8 protein, partial [Mus musculus]
Length = 262
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 175/269 (65%), Gaps = 23/269 (8%)
Query: 7 QLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKVLSHD 66
QLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + + KVL H+
Sbjct: 1 QLEASLDALLNQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLNKVLKHE 60
Query: 67 KTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQLEH 126
KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE + QL
Sbjct: 61 KTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLTT 120
Query: 127 KAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTHSLVAA 186
AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT++LVAA
Sbjct: 121 DAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPGDTNALVAA 178
Query: 187 VGMGRGLKMIMP----GPGAPVGPGM-MVAPGGPGRPVGPGPGMP-----------MGPG 230
V G+GL P GPG P PG + G G P PG P M
Sbjct: 179 VAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGASGLPQVQMPGAPNQQQPMLSGVQMAQA 238
Query: 231 GQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 GQP----GKMPSGIKTNIK-SASMHPYQR 262
>gi|410930127|ref|XP_003978450.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Takifugu rubripes]
Length = 267
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 177/268 (66%), Gaps = 13/268 (4%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
QREEKQLE+S+ES++ ++ +K+ L ++K++++ + L WPT LDNFALLSGQ + I K
Sbjct: 3 QREEKQLEASVESLISRVAHVKTALHSFIYKLENEYERLMWPTVLDNFALLSGQLNTINK 62
Query: 62 VLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKL 121
+L ++KTP RN ++PL+L+P+R+E+L +LTE R+P F+H++VPDYLRTK +PDVE +
Sbjct: 63 LLRNEKTPSFRNQVIIPLLLSPDRDEDLAKLTEQRLPVFSHEIVPDYLRTKPDPDVEEQE 122
Query: 122 IQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTH 181
QL +AA + + AQKQ NK+ + +L+ ++ R+E E+E+ + Q + DT+
Sbjct: 123 KQLTAEAARIGVEVAQKQIQALNKLCSSLLEKLNNPRDEREAESISLRQNKQYFNPADTN 182
Query: 182 SLVAAVGMGRGL-KMIMPGP---GAPVGPGMMVAPGGPG----RPVGPGPGMPMGPGG-Q 232
+LV AV G+GL K PGP G P GPG M+ GG +G GP G G Q
Sbjct: 183 TLVGAVAFGKGLSKCRPPGPVAQGHP-GPGTMM--GGTSALQQATIGAGPVQQAGSVGPQ 239
Query: 233 PMGMMGKNPSGIKTNIKAAA-AIHPYSR 259
G GK S IKTNIKAAA ++HPY+R
Sbjct: 240 QPGQQGKMSSSIKTNIKAAASSMHPYNR 267
>gi|345326050|ref|XP_001512637.2| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Ornithorhynchus anatinus]
Length = 291
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 30/282 (10%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
+QREEKQLE+S+++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 17 VQREEKQLEASVDALLNQVADLKTSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 76
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTPP+RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 77 KVLKHEKTPPLRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 136
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 137 EKQLTSDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRQNKQTFNPADT 194
Query: 181 HSLVAAVGMGRGLKMIMPGPG-------APVGPGMMVAPGGPGRPVGPGP---------- 223
++LVAAV G+GL P P GMM G + P
Sbjct: 195 NALVAAVAFGKGLSNWRPAVAGGPGQPGQPGTGGMMAGGSGLQQQQQQVPMAGAPGQQQQ 254
Query: 224 ------GMPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
G+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 255 QQALLAGVQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 291
>gi|318066043|ref|NP_001187777.1| mediator of RNA polymerase II transcription subunit 8 [Ictalurus
punctatus]
gi|308323945|gb|ADO29108.1| mediator of RNA polymerase II transcription subunit 8 [Ictalurus
punctatus]
Length = 266
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/269 (43%), Positives = 173/269 (64%), Gaps = 16/269 (5%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
QREEKQLE+S+ES++ ++ +K+ L ++K++++ D + WP+ LDNFALLSGQ + I K
Sbjct: 3 QREEKQLEASVESLISRVAHLKNSLQSFIYKLENEYDRMAWPSVLDNFALLSGQLNTINK 62
Query: 62 VLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKL 121
+L ++KTP RN ++PL+L+P+R+EEL +LTE RV F+H++VPD+LRTK +P+VE +
Sbjct: 63 LLRNEKTPSYRNQVIIPLLLSPDRDEELAKLTEQRVHVFSHEIVPDHLRTKPDPEVEEQE 122
Query: 122 IQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTH 181
QL +AA + + AQKQ T NK+ + +L+ ++ R++ ++E A Q + DT
Sbjct: 123 KQLSAEAARIGQEVAQKQIQTLNKLCSSLLEKLNNPRDDRDAETSAVRQNKQWFNPIDTT 182
Query: 182 SLVAAVGMGRGL-KMIMPGPGAPVGPGMMVAPGGP----------GRPVGPGPGMPMGPG 230
+LVAAVG G+GL K P AP PG + GGP G G G +
Sbjct: 183 ALVAAVGFGKGLSKCRPPASVAPGHPGQTMMTGGPTLQQVTIGPSGHQAGIGSSVAQQQP 242
Query: 231 GQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
GQP GK PS IKTNIK +A++HPY+R
Sbjct: 243 GQP----GKMPSSIKTNIK-SASMHPYNR 266
>gi|211827908|gb|AAH10543.2| MED8 protein [Homo sapiens]
Length = 297
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 174/271 (64%), Gaps = 23/271 (8%)
Query: 5 EKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKVLS 64
EKQLE+SL++++ ++ ++K+ L + K++++ L WP+ LD+FALLSGQ + + KVL
Sbjct: 1 EKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLNKVLK 60
Query: 65 HDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQL 124
H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE + QL
Sbjct: 61 HEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQL 120
Query: 125 EHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTHSLV 184
AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT++LV
Sbjct: 121 TTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDTNALV 178
Query: 185 AAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---GMPMG 228
AAV G+GL P GPG PG G G P P G+ M
Sbjct: 179 AAVAFGKGLSNWRPSGSSGPGQAGQPGAGTILAGTSGLQQVQMAGAPSQQQPMLSGVQMA 238
Query: 229 PGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
GQP GK PSGIKTNIK +A++HPY R
Sbjct: 239 QAGQP----GKMPSGIKTNIK-SASMHPYQR 264
>gi|432855421|ref|XP_004068212.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Oryzias latipes]
Length = 270
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 177/270 (65%), Gaps = 14/270 (5%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
QREEKQLE+++ES++ ++ +K+ L ++K++++ + L WP+ LDNFALLSGQ + I K
Sbjct: 3 QREEKQLETAVESLISRVAHVKNALSSFIYKLENEYERLTWPSVLDNFALLSGQLNTINK 62
Query: 62 VLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKL 121
+L ++KTP R+ ++PL+L+P+R+E+L +LTE RVP F+H++VPD+LRTK +P+VE +
Sbjct: 63 LLRNEKTPAFRSQVIIPLLLSPDRDEDLAKLTEQRVPVFSHEIVPDHLRTKPDPEVEEQE 122
Query: 122 IQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTH 181
QL +A + + AQK NK+ +++L+ ++ RE+ E +A A + + TDT
Sbjct: 123 KQLSAEAVRIGPELAQKHIQALNKLCSNLLEKLNNPREDREGDASAVRQNKASFNPTDTS 182
Query: 182 SLVAAVGMGRGL-KMIMPGPGAPVGPG---MMVAPGGPGR---PVGPGPGMPMGPGG--- 231
+LVAAV G+GL K PGP AP PG MM GGP +G G G GG
Sbjct: 183 ALVAAVAFGKGLSKCRPPGPVAPGHPGQGPMMS--GGPTLQQVTIGGGSNQQAGMGGPGA 240
Query: 232 -QPMGMMGKNPSGIKTNIKAAA-AIHPYSR 259
Q G GK PS IKTNIK+A+ +IHPY+R
Sbjct: 241 PQQQGQPGKMPSSIKTNIKSASGSIHPYNR 270
>gi|46309529|ref|NP_996966.1| mediator of RNA polymerase II transcription subunit 8 [Danio rerio]
gi|82185985|sp|Q6NYT1.1|MED8_DANRE RecName: Full=Mediator of RNA polymerase II transcription subunit
8; AltName: Full=Mediator complex subunit 8
gi|42542746|gb|AAH66472.1| Zgc:76877 [Danio rerio]
Length = 267
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 175/271 (64%), Gaps = 19/271 (7%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
QREEKQLE+ LES+V ++ +K L ++K++++ D L WP+ LDNFAL+SGQ + I K
Sbjct: 3 QREEKQLEAFLESLVARVAHLKGSLQSFIYKLENEYDRLTWPSVLDNFALISGQLNTINK 62
Query: 62 VLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKL 121
+L ++KTP ++ ++PL+L+P+R+EEL +LTE RVP F+H++VPD+LRTK +P+VE +
Sbjct: 63 LLRNEKTPSYKSQVIIPLLLSPDRDEELAKLTEHRVPVFSHEIVPDHLRTKPDPEVEEQE 122
Query: 122 IQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTH 181
L +AA + + AQKQ NK+ +++L+ ++ RE+ +SE A + + DT+
Sbjct: 123 KHLSAEAARIGPEVAQKQIQALNKLCSNLLEKLNNPREDRDSETSALRQNKPSFNPADTN 182
Query: 182 SLVAAVGMGRGL-KMIMPGPGAPVGPG---MMVAP--------GGPGRPVG-PGPGMPMG 228
+LVAAVG G+GL K PGP AP PG M P G G G GP P
Sbjct: 183 ALVAAVGFGKGLSKCRPPGPVAPGHPGQPMMQTGPTLQQVTIAGASGHQAGMSGPVAPQQ 242
Query: 229 PGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
P GQP GK PS IKTNIK +A++HPY+R
Sbjct: 243 P-GQP----GKIPSNIKTNIK-SASMHPYNR 267
>gi|291221619|ref|XP_002730817.1| PREDICTED: mediator of RNA polymerase II transcription subunit,
putative-like [Saccoglossus kowalevskii]
Length = 248
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/262 (42%), Positives = 168/262 (64%), Gaps = 28/262 (10%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQ +EK LE SLE+++ ++ ++K+ + + K++H+ ++L+WP+ LD+FA++S Q + +
Sbjct: 1 MQNQEKALELSLEAMISRVQDLKNSITQFIMKLEHEHETLDWPSVLDSFAIISSQINTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL +KTPP+RN +LPL+L PER+E+L +LTEGRVPAF H++VP+YLRTK EPD+E K
Sbjct: 61 KVLKSEKTPPLRNFILLPLVLAPERDEDLEKLTEGRVPAFNHEVVPNYLRTKAEPDIEEK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWE-SEAGARGGTG-QTSSLT 178
QL +A+ L+ + Q+Q N++ V++IV AR+EW+ ++G RG +G TS
Sbjct: 121 EQQLMTQASQLTPEMIQQQITNCNRLANKVIEIVGNARDEWDVDDSGIRGMSGINTSQPA 180
Query: 179 DTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQP-MGMM 237
DT++L+ AV G+GLK+ RPV P P QP +
Sbjct: 181 DTNALITAVSFGKGLKI---------------------RPVQQAPL--QQPSLQPRQDVQ 217
Query: 238 GKNPSGIKTNIKAAAAIHPYSR 259
GK PS IKTNIK +IHPY++
Sbjct: 218 GKAPSSIKTNIK--PSIHPYTQ 237
>gi|403291913|ref|XP_003937006.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform 2 [Saimiri boliviensis boliviensis]
Length = 285
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/275 (45%), Positives = 176/275 (64%), Gaps = 29/275 (10%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
+QREEKQLE+SL++++ ++ ++K+ L ++K++++ D L FALLSGQ + +
Sbjct: 24 VQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTC------FALLSGQLNTLN 77
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 78 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 137
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 138 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 195
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++LVAAV G+GL P GPG P PG G G P P G
Sbjct: 196 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGTSGLQQVQMAGAPSQQQPMLSG 255
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
+ M P GQP GK PSGIKTNIK +A++HPY R
Sbjct: 256 VQMAPTGQP----GKIPSGIKTNIK-SASMHPYQR 285
>gi|443730926|gb|ELU16221.1| hypothetical protein CAPTEDRAFT_226423 [Capitella teleta]
Length = 273
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 163/272 (59%), Gaps = 13/272 (4%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQ+++++++++ ++ EIK+ + + K++H+ ++ WP LDNFAL+SGQ + +
Sbjct: 1 MQREEKQMDATIDALIQRVGEIKTTIAQFIMKLEHEYTTMTWPNVLDNFALISGQINTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
+ L +DKTP +RN +LPL+L PE + EL +LTE RV AF H++VPDYLRTK EPD+E K
Sbjct: 61 RFLKNDKTPALRNHILLPLVLAPEPDLELEKLTESRVRAFNHEVVPDYLRTKPEPDIEEK 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+ ++ SLS D QKQ T NKV +++++V+ RE+WES+ QT+S DT
Sbjct: 121 YGSVTSRSTSLSTDNLQKQVNTLNKVSANLIEMVNSTREQWESDITKTAALPQTTSQADT 180
Query: 181 HSLVAAVGMGRGLK------MIMPGP-------GAPVGPGMMVAPGGPGRPVGPGPGMPM 227
LV+AV G+ LK + +PGP P+ GM G P P G M
Sbjct: 181 QKLVSAVSFGKSLKPRRPEPVGLPGPMNHMPQQNMPMNQGMSPGHGQPHGPPGGYNHMYQ 240
Query: 228 GPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
G G M K S +K NIK+ HPY R
Sbjct: 241 GHMGMNMNPQMKMQSSMKGNIKSGGHNHPYGR 272
>gi|229365744|gb|ACQ57852.1| Mediator of RNA polymerase II transcription subunit 8 [Anoplopoma
fimbria]
Length = 270
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/273 (42%), Positives = 175/273 (64%), Gaps = 20/273 (7%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
QREEKQLE+++ES++ ++ +K+ L + K++++ + L WP+ LDNFALLSGQ + I K
Sbjct: 3 QREEKQLEAAVESLISRVAHVKNALHSFIHKLENEYERLTWPSVLDNFALLSGQLNTINK 62
Query: 62 VLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKL 121
+L ++KTP RN ++PL+L+P+R+E+L +LTE RVP F+H++VPDYLRTK +P+V +
Sbjct: 63 LLKNEKTPSFRNQVIIPLLLSPDRDEDLAKLTEQRVPVFSHEIVPDYLRTKPDPEVGEQE 122
Query: 122 IQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTH 181
QL +AA + +AAQKQ T NK+ + +L+ ++ R++ +SE+ A + + DT+
Sbjct: 123 KQLSVEAARIGPEAAQKQIQTLNKLCSSLLEKLNNPRDDRDSESAAIRQNKPSFNPADTN 182
Query: 182 SLVAAVGMGRGLKMIMPGPGAPVGPG--------------MMVAPGGPGRPVGPGPGMPM 227
+LV AV G+GL P PG PV PG V GG G G G P+
Sbjct: 183 ALVGAVAFGKGLSKCRP-PG-PVAPGRPGQGPMMGGGPTLQQVTIGG-GSSQQTGMGGPV 239
Query: 228 GPGGQPMGMMGKNPSGIKTNIKAAA-AIHPYSR 259
P Q G GK PS IKTNIK+A+ ++HPY+R
Sbjct: 240 AP--QQQGQPGKMPSSIKTNIKSASGSMHPYNR 270
>gi|291399090|ref|XP_002715738.1| PREDICTED: mediator complex subunit 8 [Oryctolagus cuniculus]
Length = 218
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 164/259 (63%), Gaps = 41/259 (15%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPADT 178
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKN 240
++LVAAV G+GL P GK
Sbjct: 179 NALVAAVAFGKGLSNWRPS--------------------------------------GKM 200
Query: 241 PSGIKTNIKAAAAIHPYSR 259
PSGIKTNIK +A++HPY R
Sbjct: 201 PSGIKTNIK-SASMHPYQR 218
>gi|225712044|gb|ACO11868.1| Mediator of RNA polymerase II transcription subunit 8
[Lepeophtheirus salmonis]
Length = 246
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/258 (44%), Positives = 163/258 (63%), Gaps = 23/258 (8%)
Query: 3 REEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKV 62
RE+K L++SLE +++KLNEIK+ + ++ K++ D + LNW +FLD+++L+SGQ ++ K
Sbjct: 9 REQKLLQASLEGLLIKLNEIKNSVGSLIRKLETDPN-LNWESFLDSYSLVSGQLNSFLKF 67
Query: 63 LSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLI 122
+ ++TPP+R LPLIL+P+++EELL+LTE RVP+F+HDLVPD LRTK +P+VE K
Sbjct: 68 VKQERTPPLRKYATLPLILSPDKDEELLKLTENRVPSFSHDLVPDLLRTKPDPEVESKHS 127
Query: 123 QLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTHS 182
E +A S++ D A KQ A K+ L +++ REE ES+A +R +T S+ DT S
Sbjct: 128 GFESRANSIAVDQAAKQLAVIEKITNGTLKFIAREREEMESKAHSRSEIEKTVSIDDTLS 187
Query: 183 LVAAVGMGRGLK-MIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKNP 241
LVAA+G+GRGLK I P P V P +P K P
Sbjct: 188 LVAAIGVGRGLKPQIQPPPM-----------HHHLSQVRPSVHLPQN----------KAP 226
Query: 242 SGIKTNIKAAAAIHPYSR 259
S IKTNIKAA+ +HPY R
Sbjct: 227 SSIKTNIKAASQVHPYQR 244
>gi|281354703|gb|EFB30287.1| hypothetical protein PANDA_015128 [Ailuropoda melanoleuca]
Length = 250
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 152/211 (72%), Gaps = 6/211 (2%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
+QREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 VQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + TDT
Sbjct: 121 EKQLTTDAARVGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDT 178
Query: 181 HSLVAAVGMGRGLKMIMP----GPGAPVGPG 207
++LVAAV G+GL P GPG P PG
Sbjct: 179 NALVAAVAFGKGLSNWRPSGSSGPGQPGQPG 209
>gi|260821848|ref|XP_002606315.1| hypothetical protein BRAFLDRAFT_118497 [Branchiostoma floridae]
gi|229291656|gb|EEN62325.1| hypothetical protein BRAFLDRAFT_118497 [Branchiostoma floridae]
Length = 245
Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 158/259 (61%), Gaps = 17/259 (6%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
QREEKQLE+ L+++++++ +++ + L K++H+ +L W + LD+FALLSGQ S + K
Sbjct: 3 QREEKQLEAGLDALIVRVKDLRDSIHAFLMKLEHEHQTLQWTSVLDSFALLSGQLSTLQK 62
Query: 62 VLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKL 121
++ +K P ++NL LPL+L+P+ + +L TEGRVP F+H++VPDYLRTK EP+VE +
Sbjct: 63 LVMKEKMPSLQNLIFLPLVLSPDSDPQLETTTEGRVPVFSHEVVPDYLRTKFEPEVESRE 122
Query: 122 IQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTH 181
L ++ L+ +AAQKQ N + +L+ ++ A E+W+SE A G+ SSL DT
Sbjct: 123 KTLTTQSERLTPEAAQKQIQQLNNLCDKLLNKLNTASEDWDSEVSASQGSTPASSLADTS 182
Query: 182 SLVAAVGMGRGLK-MIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKN 240
+L+AAV G+GLK P P P +P GP P GK
Sbjct: 183 ALIAAVSFGKGLKPSRTPSQSGPDTPQSQPSPQASQ--AGPAP--------------GKA 226
Query: 241 PSGIKTNIKAAAAIHPYSR 259
PS IKTNI++ A+ HPY R
Sbjct: 227 PSTIKTNIRSGASSHPYQR 245
>gi|449266441|gb|EMC77494.1| Mediator of RNA polymerase II transcription subunit 8, partial
[Columba livia]
Length = 247
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 162/247 (65%), Gaps = 18/247 (7%)
Query: 3 REEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKV 62
REEKQLE +LE+++ ++ ++K+ LV ++K++++ D L WP+ LD+FALLSGQ + + KV
Sbjct: 1 REEKQLELTLEALISQVADLKNSLVSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLNKV 60
Query: 63 LSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLI 122
L H+KTP +RN ++PL+L+P+R+EE++R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 LKHEKTPLLRNQVIIPLVLSPDRDEEIMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEK 120
Query: 123 QLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTHS 182
QL AA +S D AQKQ + NK+ +++L+ +SK EE ESE+G QT + DT++
Sbjct: 121 QLITDAARISPDVAQKQIQSLNKMCSNLLEKISK--EERESESGGLRQNKQTFNPADTNA 178
Query: 183 LVAAVGMGRGLKMIM-PGPGAPV-----GPGMMVA----------PGGPGRPVGPGPGMP 226
LVAAV G+GL PG GA V G G ++A G P + G+
Sbjct: 179 LVAAVAFGKGLSNRRPPGSGASVQSGQPGAGAIIAGASGMQQVSMSGAPAQQQPMLAGVQ 238
Query: 227 MGPGGQP 233
M GQP
Sbjct: 239 MAQTGQP 245
>gi|440903945|gb|ELR54530.1| Mediator of RNA polymerase II transcription subunit 8, partial [Bos
grunniens mutus]
Length = 293
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 175/297 (58%), Gaps = 44/297 (14%)
Query: 3 REEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKV 62
REEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + + KV
Sbjct: 1 REEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLNKV 60
Query: 63 LSHDKTPPIRNLTVLPLILNPEREEELL--------RLTEGRVPAFTHDLVPDYLRTKQE 114
L H+KTP RN ++PL+L+P+R+E+L R TEGRVP F+H++VPD+LRTK +
Sbjct: 61 LKHEKTPLFRNQVIIPLVLSPDRDEDLRINKICVLQRQTEGRVPVFSHEVVPDHLRTKPD 120
Query: 115 PDVEHKLIQLEHKAASLSYDAA----------------------QKQAATFNKVITHVLD 152
P+VE + QL AA + DAA QKQ + NK+ +++L+
Sbjct: 121 PEVEEQEKQLTTDAARIGADAAQVGLSHCPAALHPRVLPYLHVLQKQIQSLNKMCSNLLE 180
Query: 153 IVSKAREEWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMP----GPGAPVGPGM 208
+SK EE ESE+G QT + DT++LVAAV G+GL P GP P PG
Sbjct: 181 KISK--EERESESGGLRPNKQTFNPADTNALVAAVAFGKGLSNWRPAGSSGPSQPGQPGA 238
Query: 209 -MVAPGGPGRPV-----GPGPGMPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
V G G P PM G Q M GK PSGIKTNIK +A++HPY R
Sbjct: 239 GTVLAGASGLQQVQMAGAPNQQQPMLSGVQ-MAQAGKMPSGIKTNIK-SASMHPYQR 293
>gi|444721399|gb|ELW62136.1| Mediator of RNA polymerase II transcription subunit 8 [Tupaia
chinensis]
Length = 354
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 160/251 (63%), Gaps = 18/251 (7%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + +
Sbjct: 1 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VP++LRTK +P+VE +
Sbjct: 61 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPNHLRTKPDPEVEEQ 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT + DT
Sbjct: 121 EKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPNDT 178
Query: 181 HSLVAAVGMGRGLKMIM----PGPGAPVGPGMMVAPGG---------PGRPVGPGP---G 224
++L AAV G+GL GPG P PG G G P P G
Sbjct: 179 NALAAAVAFGKGLSNWRSSGSSGPGQPGQPGAGTILAGASGLQQVQMAGAPSQQQPMLSG 238
Query: 225 MPMGPGGQPMG 235
+ M GQP+
Sbjct: 239 VQMAQAGQPVA 249
>gi|29366816|ref|NP_776067.1| mediator of RNA polymerase II transcription subunit 8 isoform 2
[Mus musculus]
gi|12837956|dbj|BAB24016.1| unnamed protein product [Mus musculus]
Length = 234
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 163/275 (59%), Gaps = 57/275 (20%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNW----------------PT 44
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L P+
Sbjct: 1 MQREEKQLEASLDALLNQVADLKNSLGSFIYKLENEYDRLTCKSGSCLCQTQGCESSGPS 60
Query: 45 FLDNFALLSGQFSAIAKVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDL 104
LD+FALLSGQ + + KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++
Sbjct: 61 VLDSFALLSGQLNTLNKVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEV 120
Query: 105 VPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESE 164
VPD+LRTK +P+VE + QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE
Sbjct: 121 VPDHLRTKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESE 178
Query: 165 AGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPG 224
+G QT + DT++LVAAV G+GL P
Sbjct: 179 SGGLRPNKQTFNPGDTNALVAAVAFGKGLSNWRPS------------------------- 213
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
GK PSGIKTNIK +A++HPY R
Sbjct: 214 -------------GKMPSGIKTNIK-SASMHPYQR 234
>gi|148698559|gb|EDL30506.1| mediator of RNA polymerase II transcription, subunit 8 homolog
(yeast), isoform CRA_a [Mus musculus]
Length = 234
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 163/275 (59%), Gaps = 57/275 (20%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNW----------------PT 44
MQREEKQLE+SL++++ ++ ++K+ L ++K++++ D L P+
Sbjct: 1 MQREEKQLEASLDALLNQVADLKNSLGSFIYKLENEYDRLTCKSGSCLCQTQGYESSGPS 60
Query: 45 FLDNFALLSGQFSAIAKVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDL 104
LD+FALLSGQ + + KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++
Sbjct: 61 VLDSFALLSGQLNTLNKVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEV 120
Query: 105 VPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESE 164
VPD+LRTK +P+VE + QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE
Sbjct: 121 VPDHLRTKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESE 178
Query: 165 AGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPG 224
+G QT + DT++LVAAV G+GL P
Sbjct: 179 SGGLRPNKQTFNPGDTNALVAAVAFGKGLSNWRPS------------------------- 213
Query: 225 MPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
GK PSGIKTNIK +A++HPY R
Sbjct: 214 -------------GKMPSGIKTNIK-SASMHPYQR 234
>gi|156364935|ref|XP_001626599.1| predicted protein [Nematostella vectensis]
gi|156213481|gb|EDO34499.1| predicted protein [Nematostella vectensis]
Length = 252
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 159/258 (61%), Gaps = 15/258 (5%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQ+EEK +E+SLE++ ++ E++ + L K++ R+ LNWP+ LDNFALLSGQ S +
Sbjct: 3 MQQEEKLIETSLEAITSRVQEVRDSVHTFLAKLE--REPLNWPSVLDNFALLSGQVSTLT 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L DKTP +RNL +LP+++ E++EEL+++++GR+PAF H++VPD+LRTK EP+VE
Sbjct: 61 KLLKGDKTPALRNLVLLPVLVQQEQDEELVKISQGRIPAFNHEVVPDHLRTKYEPEVEEA 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
L +AS++ + AQKQ N+++T + DI++ A+E+WE E + +S+ D
Sbjct: 121 EQSLVVASASITQENAQKQINHLNELLTTLTDIITSAKEDWEGEQNS-ASRSTSSTNPDI 179
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKN 240
+LVAAV G+GLK P G QP GK+
Sbjct: 180 GALVAAVTFGKGLK---PNKTTNSSKTRTSTSSEQG-----SAQWMNNKADQP----GKH 227
Query: 241 PSGIKTNIKAAAAIHPYS 258
PS IKT +KAAA+ HPY+
Sbjct: 228 PSSIKTELKAAASPHPYA 245
>gi|390368203|ref|XP_787347.3| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Strongylocentrotus purpuratus]
Length = 237
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 155/250 (62%), Gaps = 20/250 (8%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQ ++K L++SL+ ++ ++N++K L +L K++H ++LNWP+ L++FALLSGQ + +
Sbjct: 1 MQNQDKVLDNSLDYILSRVNDLKKALTDLLMKLEHHHETLNWPSVLNSFALLSGQINTLN 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
+ L DKTP ++NL +LPL L+ +R+EEL ++TEGRV +F HD+VP+YLRTK EP+ E +
Sbjct: 61 RHLKSDKTPVLKNLIILPLKLSQDRDEELEKVTEGRVASFNHDVVPNYLRTKPEPESEER 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
L AA LS + A+KQ N++ TH+L +++ RE W+ ++ T TSS +DT
Sbjct: 121 EQVLAKDAAQLSPEVAKKQIDNLNRLSTHLLSMLASQRETWDPDSSKLNIT--TSSPSDT 178
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKN 240
+ LV AV MGRG K GM+ P G M G +GK
Sbjct: 179 NMLVGAVNMGRGFKR-----------GMVQQPMS-------NMGAQMARQGDQHAPVGKI 220
Query: 241 PSGIKTNIKA 250
PSGI+TNIK+
Sbjct: 221 PSGIRTNIKS 230
>gi|405974530|gb|EKC39165.1| Mediator of RNA polymerase II transcription subunit 8-B
[Crassostrea gigas]
Length = 1576
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 137/192 (71%)
Query: 3 REEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKV 62
+EEKQLE +LES++ ++ +IK+ + +L K++++ + L WP+ LDNFALLSGQ + + K+
Sbjct: 237 KEEKQLEHTLESLIQRVQDIKNSIANLLVKLENEYNILQWPSMLDNFALLSGQLNTLGKL 296
Query: 63 LSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLI 122
L ++K PP+RN +LP+ L+ +R+ EL ++TE RV AF D+VP YLRTK EP+VE +L
Sbjct: 297 LRNEKVPPLRNSILLPIALSGDRDPELEKVTERRVIAFNADVVPHYLRTKPEPEVEERLQ 356
Query: 123 QLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTHS 182
+ ++A+SL+ +AAQKQ NK+ ++++DI+ +E E EA + QTSS DT++
Sbjct: 357 PVLNRASSLTPEAAQKQINAMNKMTSNIVDIIKSHQETMEKEANQKSSLSQTSSQADTNT 416
Query: 183 LVAAVGMGRGLK 194
L++AV G+G K
Sbjct: 417 LLSAVLTGKGFK 428
Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats.
Identities = 74/168 (44%), Positives = 113/168 (67%)
Query: 27 VGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKVLSHDKTPPIRNLTVLPLILNPERE 86
V M + +R + P+ LDNFALLSGQ + + K+L ++K PP+RN +LP+ L+ +R+
Sbjct: 8 VQMQVREPKERRNSFLPSMLDNFALLSGQLNTLGKLLRNEKVPPLRNSILLPIALSGDRD 67
Query: 87 EELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKV 146
EL ++TE RV AF D+VP YLRTK EP+VE +L + ++A+SL+ +AAQKQ NK+
Sbjct: 68 PELEKVTERRVIAFNADVVPHYLRTKPEPEVEERLQPVLNRASSLTPEAAQKQINAMNKM 127
Query: 147 ITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGLK 194
++++DI+ +E E EA + QTSS DT++L++AV G+G K
Sbjct: 128 TSNIVDIIKSHQETMEKEANQKSSLSQTSSQADTNTLLSAVLTGKGFK 175
>gi|355702059|gb|AES01807.1| mediator of RNA polymerase II transcription, subunit 8-like protein
isoform 2 [Mustela putorius furo]
Length = 171
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 129/173 (74%), Gaps = 2/173 (1%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
QREEKQLE+SL++++ ++ ++K+ L ++K++++ D L WP+ LD+FALLSGQ + + K
Sbjct: 1 QREEKQLEASLDALLSQVADLKNSLGSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLNK 60
Query: 62 VLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKL 121
VL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 61 VLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQE 120
Query: 122 IQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQT 174
QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT
Sbjct: 121 KQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQT 171
>gi|221101898|ref|XP_002160450.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Hydra magnipapillata]
Length = 215
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQ +EK +E+SLES+V ++ +IK L LFKI+H+ L WP LDNFALLSGQ + +
Sbjct: 1 MQVDEKLIETSLESLVGRVGDIKVSLQNFLFKIEHEY--LTWPQVLDNFALLSGQINTLN 58
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K+L +D P +RNL VLP+ + P+ +EEL RLTE R+ F H++VP+ LRTK EPDVE +
Sbjct: 59 KLLKNDHMPILRNLCVLPINVQPDCDEELQRLTENRIHVFNHEVVPNVLRTKYEPDVEKE 118
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
L +KA SL + A+KQ T N++++ +L+++ AR++W+ E + T S DT
Sbjct: 119 EQMLINKAVSLQQEEAEKQVFTLNELVSSILELIQSARDDWDGEFSTQ-QTNLAPSSNDT 177
Query: 181 HSLVAAVGMGRGLK 194
+ L+AA+ G GL+
Sbjct: 178 NILIAAMSSGAGLR 191
>gi|239789996|dbj|BAH71588.1| ACYPI001064 [Acyrthosiphon pisum]
Length = 146
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 102/124 (82%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQRE+KQLE LE+ KLNE K+Q+ ++FK++H+RD++NW T LD FA+ S Q++AI
Sbjct: 1 MQREDKQLELVLENFQSKLNEFKAQIYALIFKLEHERDNVNWTTVLDTFAVFSTQYTAIM 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
K LS++K P +RN +VLPL+LNPER+E+L R+TE RVPA +HD+VPD+LRTK EP+VEHK
Sbjct: 61 KYLSYEKLPQLRNYSVLPLMLNPERDEDLARITENRVPALSHDIVPDFLRTKTEPEVEHK 120
Query: 121 LIQL 124
L+QL
Sbjct: 121 LMQL 124
>gi|380798087|gb|AFE70919.1| mediator of RNA polymerase II transcription subunit 8 isoform 1,
partial [Macaca mulatta]
Length = 212
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 136/219 (62%), Gaps = 23/219 (10%)
Query: 57 SAIAKVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPD 116
+ + KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRTK +P+
Sbjct: 1 NTLNKVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPE 60
Query: 117 VEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSS 176
VE + QL AA + DAAQKQ + NK+ +++L+ +SK EE ESE+G QT +
Sbjct: 61 VEEQEKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFN 118
Query: 177 LTDTHSLVAAVGMGRGLKMIMP----GPGAPVGPGMMVAPGG---------PGRPVGPGP 223
TDT++LVAAV G+GL P GPG P PG G G P P
Sbjct: 119 PTDTNALVAAVAFGKGLSNWRPSGSSGPGQPGQPGAGTILAGTSGLQQVQMAGAPSQQQP 178
Query: 224 ---GMPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
G+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 179 MLSGVQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 212
>gi|449513249|ref|XP_002197237.2| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like, partial [Taeniopygia guttata]
Length = 209
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 133/208 (63%), Gaps = 20/208 (9%)
Query: 43 PTFLDNFALLSGQFSAIAKVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTH 102
P+ LD+FALLSGQ + + KVL H+KTP +RN ++PL+L+P+R+EE++R TEGRVP F+H
Sbjct: 1 PSVLDSFALLSGQLNTLNKVLKHEKTPLLRNQVIIPLVLSPDRDEEIMRQTEGRVPVFSH 60
Query: 103 DLVPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWE 162
++VPD+LRTK +P+VE + QL AA +S DAAQKQ + NK+ +++L+ +SK EE E
Sbjct: 61 EVVPDHLRTKPDPEVEEQEKQLITDAARISPDAAQKQIQSLNKMCSNLLEKISK--EERE 118
Query: 163 SEAGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIM-PGPGAPV-----GPGMMVAPGGPG 216
SE+G QT + DT++LVAAV G+GL PG GA V G G ++A G G
Sbjct: 119 SESGGLRQNKQTFNPADTNALVAAVAFGKGLSNRRPPGSGASVQSGQPGAGAIIA-GASG 177
Query: 217 RPVGPGPGMP-----------MGPGGQP 233
P G P M P GQP
Sbjct: 178 MQQVPMTGAPAQQQPMLAGVQMAPAGQP 205
>gi|47213141|emb|CAF96636.1| unnamed protein product [Tetraodon nigroviridis]
Length = 324
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 168/331 (50%), Gaps = 81/331 (24%)
Query: 3 REEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKV 62
REEKQLE+S+ES++ ++ +K+ L ++K++++ + L WP+ LDNFALLSGQ + I K+
Sbjct: 1 REEKQLETSVESLISRVAHVKAALHSFIYKLENEYERLMWPSVLDNFALLSGQLNTINKL 60
Query: 63 LSHDKTPPIRNLTVLPLILNPEREEELL------------RLTEGRVPAFTHDLVPDYLR 110
L ++KTP RN ++PL+L+P+R+E+L +LTE R+P F+H++VPDYLR
Sbjct: 61 LRNEKTPSFRNQVIIPLLLSPDRDEDLAVKVFTILVTLPQKLTEQRLPVFSHEIVPDYLR 120
Query: 111 TKQEPDVEHKLIQLEHKAASLSYDAA---------------------------------- 136
TK +P+VE + QL +AA + + A
Sbjct: 121 TKPDPEVEEQEKQLSAEAARMGVEVAQVGAALCSPNGAGSRPGGLPLRHLRRRSAPVHPG 180
Query: 137 --------------QKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTHS 182
QKQ NKV + +L+ ++ REE ++E+ + Q + DT++
Sbjct: 181 RGSGGLRAFVCLCEQKQIQALNKVCSGLLEKLNNPREERDAESISLRQNKQYFNPADTNT 240
Query: 183 LVAAVGMGRGLKMIMPGPGAPVGPG-------------MMVAPGGPGRPVGPGPGMPMGP 229
LV AV GRGL P PV PG + A G G G +P
Sbjct: 241 LVGAVAFGRGLSKCR--PAGPVAPGHPGPGTMMGGGTALQQAAIGGGAVQQAGSVVPQQ- 297
Query: 230 GGQPMGMMGKNPSGIKTNIK-AAAAIHPYSR 259
G GK S IKTNIK A++++HPY+R
Sbjct: 298 ----QGQQGKMASSIKTNIKSASSSMHPYNR 324
>gi|391339094|ref|XP_003743888.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Metaseiulus occidentalis]
Length = 237
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 154/262 (58%), Gaps = 28/262 (10%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
M++E+KQ++ ++++++ + ++K+ + ++ +++++ ++L WP LD FAL+SGQ + +
Sbjct: 1 MEKEDKQVDQAVDALLSRTTDLKNNIQQLILRLENEYETLQWPAVLDYFALISGQMNNLL 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL DK P +RN +LPL+++P+ + +L R+T+GRVP F H VPDYLRT +P++E
Sbjct: 61 KVLRSDKLPKLRNRIILPLLVSPDPDPDLQRVTDGRVPLFNHQAVPDYLRTLCDPEIEAA 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+ +KAA ++ DAAQK A N++ + +I+ RE+W+ +A +R S DT
Sbjct: 121 DQVILNKAAQMNGDAAQKLIAAHNRICQNACEIIRSTREDWDVDATSRVAPSIMSG--DT 178
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPMGMMGKN 240
L++A+ GR L+ GP R P P +G M + GK
Sbjct: 179 IVLLSAICGGRYLR-------------------GPER--APNPS--LGNSCPKMAVGGKM 215
Query: 241 PSG-IKTNIKAAAAI--HPYSR 259
P+ ++TNIK+A + HPY R
Sbjct: 216 PTATVRTNIKSARGMSSHPYMR 237
>gi|432094977|gb|ELK26385.1| Mediator of RNA polymerase II transcription subunit 8 [Myotis
davidii]
Length = 190
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 116/156 (74%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQREEKQLE+SL++++ ++ ++K+ L ++K+++ D L WP+ LD+ ALLSGQ + +
Sbjct: 33 MQREEKQLEASLDALLSQVADLKNSLGSFIYKLENKYDRLTWPSVLDSSALLSGQLNTLN 92
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL H KTP RN ++PL+L+P+R E+L+R TEGRVP F+H++VPD+LRTK +P+VE +
Sbjct: 93 KVLKHKKTPLFRNQVIIPLVLSPDRAEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQ 152
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSK 156
QL AA + D AQKQ + NK+ +++L+ +SK
Sbjct: 153 EKQLTTDAARIGADVAQKQIQSLNKMCSNLLEKISK 188
>gi|391334838|ref|XP_003741807.1| PREDICTED: mediator of RNA polymerase II transcription subunit
8-like [Metaseiulus occidentalis]
Length = 255
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 153/262 (58%), Gaps = 10/262 (3%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
M +E+KQ++ +++++++ ++K+ + ++ +++++ ++L WP LDNFAL+SGQ S +
Sbjct: 1 MDKEDKQVDQVVDALLLRTTDLKNNIQQLICRLENEYETLQWPAVLDNFALISGQMSNLL 60
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
KVL DK P +RN +LPL+++P+ + EL R+TEGRVP F H VPDYLRT +P++E
Sbjct: 61 KVLRSDKIPKLRNRIILPLLVSPDPDPELQRITEGRVPLFNHQAVPDYLRTLCDPEIEAA 120
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDT 180
+ KA+ ++ +A QK N++ + +I+ +R++W+ +A +R +S +T
Sbjct: 121 DQAITAKASQMTGEATQKLIVAHNRISQNACEIIRSSRDDWDVDASSRAPPSCIAS--ET 178
Query: 181 HSLVAAVGMGRGLKMIMPGPGAPVGPGMM-VAPGGPGRPVGPGPGMPMGPGGQPMGMMGK 239
LV+A GR ++ GPG P G G + P G G P GK
Sbjct: 179 TVLVSATLGGRSVR----GPG-PHGSGALGTNSPKPIGGPMGPGGSRGGSMAAPQSGGGK 233
Query: 240 NPSG-IKTNIKAAAAI-HPYSR 259
P+ IKTNIK+ + HPY R
Sbjct: 234 MPTATIKTNIKSGGGMSHPYMR 255
>gi|198429447|ref|XP_002129358.1| PREDICTED: similar to mediator of RNA polymerase II transcription,
subunit 8 homolog [Ciona intestinalis]
Length = 240
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 109/193 (56%), Gaps = 2/193 (1%)
Query: 4 EEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKVL 63
E K LE S+++++++ I+ L LFK+ ++ +L WPT LDNFALLSGQ S++ +
Sbjct: 5 EAKVLEMSVDALIVRAKAIRKALEDFLFKLTNEHQTLTWPTVLDNFALLSGQISSLLAAM 64
Query: 64 SHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQ 123
+K P +RN ++P+ L+P+ + LL LTEGRV +H P+YLRTK +P VE Q
Sbjct: 65 KSEKMPALRNYPIVPVRLSPDPDPHLLALTEGRVSLMSHTETPNYLRTKPDPAVEQAERQ 124
Query: 124 L--EHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTH 181
L E + + AQ Q A FNK VL+ V AR W ++ T + T
Sbjct: 125 LISEVGLHTENVSNAQSQVAMFNKQCNKVLEKVKTARANWRADTVTSRSNPPTFNPKATE 184
Query: 182 SLVAAVGMGRGLK 194
LVAA GRGLK
Sbjct: 185 ELVAAAYFGRGLK 197
>gi|390465829|ref|XP_003733473.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform 2 [Callithrix jacchus]
Length = 179
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 111/186 (59%), Gaps = 23/186 (12%)
Query: 90 LRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITH 149
+R TEGRVP F+H++VPD+LRTK +P+VE + QL AA + DAAQKQ + NK+ ++
Sbjct: 1 MRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSN 60
Query: 150 VLDIVSKAREEWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMP----GPGAPVG 205
+L+ +SK EE ESE+G QT + TDT++LVAAV G+GL P GPG P
Sbjct: 61 LLEKISK--EERESESGGLRPNKQTFNPTDTNALVAAVAFGKGLSNWRPSGSSGPGQPGQ 118
Query: 206 PGMMVAPGG---------PGRPVGPGP---GMPMGPGGQPMGMMGKNPSGIKTNIKAAAA 253
PG G G P P G+ M P GQP GK PSGIKTNIK +A+
Sbjct: 119 PGAGTILAGTSGLQQVQMAGAPSQQQPILSGVQMAPAGQP----GKMPSGIKTNIK-SAS 173
Query: 254 IHPYSR 259
+HPY R
Sbjct: 174 MHPYQR 179
>gi|109003401|ref|XP_001093775.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform 2 [Macaca mulatta]
gi|26449285|dbj|BAC41770.1| hypothetical protein [Macaca fascicularis]
Length = 239
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 89/111 (80%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
+QREEKQLE+SL++++ ++ ++K+ L + K++++ L WP+ LD+FALLSGQ + +
Sbjct: 78 VQREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLN 137
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRT 111
KVL H+KTP RN ++PL+L+P+R+E+L+R TEGRVP F+H++VPD+LRT
Sbjct: 138 KVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRT 188
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 5/36 (13%)
Query: 224 GMPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
G+ M GQP GK PSGIKTNIK +A++HPY R
Sbjct: 209 GVQMAQAGQP----GKMPSGIKTNIK-SASMHPYQR 239
>gi|12846970|dbj|BAB27384.1| unnamed protein product [Mus musculus]
gi|148698562|gb|EDL30509.1| mediator of RNA polymerase II transcription, subunit 8 homolog
(yeast), isoform CRA_d [Mus musculus]
Length = 179
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 110/186 (59%), Gaps = 23/186 (12%)
Query: 90 LRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITH 149
+R TEGRVP F+H++VPD+LRTK +P+VE + QL AA + DAAQKQ + NK+ ++
Sbjct: 1 MRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSN 60
Query: 150 VLDIVSKAREEWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMP----GPGAPVG 205
+L+ +SK EE ESE+G QT + DT++LVAAV G+GL P GPG P
Sbjct: 61 LLEKISK--EERESESGGLRPNKQTFNPGDTNALVAAVAFGKGLSNWRPSGSSGPGQPGQ 118
Query: 206 PGM-MVAPGGPGRPVGPGPGMP-----------MGPGGQPMGMMGKNPSGIKTNIKAAAA 253
PG + G G P PG P M GQP GK PSGIKTNIK +A+
Sbjct: 119 PGAGTILAGASGLPQVQMPGAPNQQQPMLSGVQMAQAGQP----GKMPSGIKTNIK-SAS 173
Query: 254 IHPYSR 259
+HPY R
Sbjct: 174 MHPYQR 179
>gi|441634203|ref|XP_004089816.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform 2 [Nomascus leucogenys]
Length = 179
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 111/186 (59%), Gaps = 23/186 (12%)
Query: 90 LRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITH 149
+R TEGRVP F+H++VPD+LRTK +P+VE + QL AA + DAAQKQ + NK+ ++
Sbjct: 1 MRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSN 60
Query: 150 VLDIVSKAREEWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMP----GPGAP-- 203
+L+ +SK EE ESE+G QT + TDT++LVAAV G+GL P GPG P
Sbjct: 61 LLEKISK--EERESESGGLRPNKQTFNPTDTNALVAAVAFGKGLSNWRPSGSSGPGQPGQ 118
Query: 204 VGPGMMVA----------PGGPGRPVGPGPGMPMGPGGQPMGMMGKNPSGIKTNIKAAAA 253
G G ++A G P + G+ M QP GK PSGIKTNIK +A+
Sbjct: 119 AGAGTILAGTSGLQQVQMAGAPSQQQPMLSGVQMAQASQP----GKMPSGIKTNIK-SAS 173
Query: 254 IHPYSR 259
+HPY R
Sbjct: 174 MHPYQR 179
>gi|149035494|gb|EDL90175.1| mediator of RNA polymerase II transcription, subunit 8 homolog
(yeast) (predicted), isoform CRA_b [Rattus norvegicus]
Length = 179
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 109/186 (58%), Gaps = 23/186 (12%)
Query: 90 LRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITH 149
+R TEGRVP F+H++VPD+LRTK +P+VE + QL AA + DAAQKQ + NK+ ++
Sbjct: 1 MRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSN 60
Query: 150 VLDIVSKAREEWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMP----GPGAPVG 205
+L+ +SK EE ESE+G QT + DT++LVAAV G+GL P GPG P
Sbjct: 61 LLEKISK--EERESESGGLRPNKQTFNPADTNALVAAVAFGKGLSNWRPSGSSGPGQPGQ 118
Query: 206 PGMMVAPGG---------PGRPVGPGP---GMPMGPGGQPMGMMGKNPSGIKTNIKAAAA 253
PG G G P P G+ M GQP GK PSGIKTNIK +A+
Sbjct: 119 PGAGTILAGASGLQQVQMAGAPNQQQPMLSGVQMAQAGQP----GKMPSGIKTNIK-SAS 173
Query: 254 IHPYSR 259
+HPY R
Sbjct: 174 MHPYQR 179
>gi|48762704|ref|NP_001001653.1| mediator of RNA polymerase II transcription subunit 8 isoform 1
[Homo sapiens]
gi|395730633|ref|XP_003775760.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform 2 [Pongo abelii]
gi|127797964|gb|AAH10019.3| MED8 protein [Homo sapiens]
Length = 179
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 109/186 (58%), Gaps = 23/186 (12%)
Query: 90 LRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITH 149
+R TEGRVP F+H++VPD+LRTK +P+VE + QL AA + DAAQKQ + NK+ ++
Sbjct: 1 MRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSN 60
Query: 150 VLDIVSKAREEWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMP----GPGAPVG 205
+L+ +SK EE ESE+G QT + TDT++LVAAV G+GL P GPG
Sbjct: 61 LLEKISK--EERESESGGLRPNKQTFNPTDTNALVAAVAFGKGLSNWRPSGSSGPGQAGQ 118
Query: 206 PGMMVAPGG---------PGRPVGPGP---GMPMGPGGQPMGMMGKNPSGIKTNIKAAAA 253
PG G G P P G+ M GQP GK PSGIKTNIK +A+
Sbjct: 119 PGAGTILAGTSGLQQVQMAGAPSQQQPMLSGVQMAQAGQP----GKMPSGIKTNIK-SAS 173
Query: 254 IHPYSR 259
+HPY R
Sbjct: 174 MHPYQR 179
>gi|119627504|gb|EAX07099.1| mediator of RNA polymerase II transcription, subunit 8 homolog
(yeast) [Homo sapiens]
gi|123981770|gb|ABM82714.1| mediator of RNA polymerase II transcription, subunit 8 homolog (S.
cerevisiae) [synthetic construct]
gi|124000639|gb|ABM87828.1| mediator of RNA polymerase II transcription, subunit 8 homolog (S.
cerevisiae) [synthetic construct]
gi|261861244|dbj|BAI47144.1| mediator complex subunit 8 [synthetic construct]
Length = 212
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 109/186 (58%), Gaps = 23/186 (12%)
Query: 90 LRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITH 149
+R TEGRVP F+H++VPD+LRTK +P+VE + QL AA + DAAQKQ + NK+ ++
Sbjct: 1 MRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSN 60
Query: 150 VLDIVSKAREEWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMP----GPGAPVG 205
+L+ +SK EE ESE+G QT + TDT++LVAAV G+GL P GPG
Sbjct: 61 LLEKISK--EERESESGGLRPNKQTFNPTDTNALVAAVAFGKGLSNWRPSGSSGPGQAGQ 118
Query: 206 PGMMVAPGG---------PGRPVGPGP---GMPMGPGGQPMGMMGKNPSGIKTNIKAAAA 253
PG G G P P G+ M GQP GK PSGIKTNIK +A+
Sbjct: 119 PGAGTILAGTSGLQQVQMAGAPSQQQPMLSGVQMAQAGQP----GKMPSGIKTNIK-SAS 173
Query: 254 IHPYSR 259
+HPY R
Sbjct: 174 MHPYQR 179
>gi|156350312|ref|XP_001622231.1| hypothetical protein NEMVEDRAFT_v1g221006 [Nematostella vectensis]
gi|156208707|gb|EDO30131.1| predicted protein [Nematostella vectensis]
Length = 264
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 135/275 (49%), Gaps = 37/275 (13%)
Query: 1 MQREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIA 60
MQ+EEK +E+SLE++ ++ E++ + L K++ R+ LNWP+ LDNFALLS +
Sbjct: 3 MQQEEKLIETSLEAITSRVQEVRDSVHTFLAKLE--REPLNWPSVLDNFALLS-----VP 55
Query: 61 KVLSHDKTPPI----RNLTVLPLILNPEREE-------ELLRLTEGRVPAFTHDL----- 104
L P + ++L V + E + ELL + + D
Sbjct: 56 DHLRTKYEPEVEEAEQSLVVASASITQENAQKQINHLNELLTTLTDMITSAKEDWEGEQN 115
Query: 105 -VPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWES 163
VPD+LRTK EP+VE L +AS++ + AQKQ N+++T + DI++ A+E+WE
Sbjct: 116 SVPDHLRTKYEPEVEEAEQSLVVASASITQENAQKQINHLNELLTTLTDIITSAKEDWEG 175
Query: 164 EAGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGP 223
E + +S+ D +LVAAV G+GLK P G
Sbjct: 176 EQNS-ASRSTSSTNPDIGALVAAVTFGKGLK---PNKTTNSSKTRTSTSSEQG-----SA 226
Query: 224 GMPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYS 258
QP GK+PS IKT +KAAA+ HPY+
Sbjct: 227 QWMNNKADQP----GKHPSSIKTELKAAASPHPYA 257
>gi|196000638|ref|XP_002110187.1| hypothetical protein TRIADDRAFT_53928 [Trichoplax adhaerens]
gi|190588311|gb|EDV28353.1| hypothetical protein TRIADDRAFT_53928 [Trichoplax adhaerens]
Length = 163
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 98/157 (62%), Gaps = 2/157 (1%)
Query: 5 EKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKVLS 64
+K +E + +S+ +L++I++ L +++ ++ +L WPT LDNFAL++GQ S + L
Sbjct: 2 DKSIEFTEQSIGTRLDDIQASLESFTYRLQYE--NLQWPTVLDNFALIAGQMSMLNNHLR 59
Query: 65 HDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQL 124
++K P + NL +LPL ++ E + L +T+ R+ F H++VPDYLRTK EP+VE +L
Sbjct: 60 NEKLPQLHNLILLPLTISQETDSNLQEITKNRIQTFDHEIVPDYLRTKPEPEVERDQKEL 119
Query: 125 EHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEW 161
KA LS +K+ N +I +++I++ AR W
Sbjct: 120 AEKADMLSEGEKEKEVTDANVLIDDLIEIINNARTAW 156
>gi|149035497|gb|EDL90178.1| mediator of RNA polymerase II transcription, subunit 8 homolog
(yeast) (predicted), isoform CRA_e [Rattus norvegicus]
Length = 129
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 93/170 (54%), Gaps = 41/170 (24%)
Query: 90 LRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITH 149
+R TEGRVP F+H++VPD+LRTK +P+VE + QL AA + DAAQKQ + NK+ ++
Sbjct: 1 MRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSN 60
Query: 150 VLDIVSKAREEWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMM 209
+L+ +SK EE ESE+G QT + DT++LVAAV G+GL P
Sbjct: 61 LLEKISK--EERESESGGLRPNKQTFNPADTNALVAAVAFGKGLSNWRPS---------- 108
Query: 210 VAPGGPGRPVGPGPGMPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
GK PSGIKTNIK +A++HPY R
Sbjct: 109 ----------------------------GKMPSGIKTNIK-SASMHPYQR 129
>gi|313240355|emb|CBY32696.1| unnamed protein product [Oikopleura dioica]
Length = 226
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 115/225 (51%), Gaps = 22/225 (9%)
Query: 5 EKQLESSLESVVMKLNEIKSQLVGMLFKIDHD----RDSLNWPTFLDNFALLSGQFSAIA 60
EKQL+ ++ +V + ++K L G+L K+D + R+ NW + LD++AL++GQ +
Sbjct: 12 EKQLDHAISTVYNRSKDLKIALEGLLGKLDSELAQGREP-NWASLLDSYALITGQIETLT 70
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
+ L + P + N + P+ILNP R+E + RLTE RVP+ H++VPDY RTK +P VE
Sbjct: 71 RYLRSESAPRLVNTSCFPVILNPHRDEIVARLTEERVPSVNHEVVPDYFRTKPDPAVE-- 128
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLT-- 178
+Q E + + DA + I V D+V+K ++ E ++ +
Sbjct: 129 ALQKELNKDNSTIDAEK---------IKQVNDLVNKLADKIEVSLDSKRHNLENRRYNED 179
Query: 179 -DTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPG-RPVGP 221
DT+SL+ G GL + G P P P G RP P
Sbjct: 180 DDTNSLIGTYYYGIGLTNVTSGARNP--PVTQQRPAGNAIRPQQP 222
>gi|313222205|emb|CBY39183.1| unnamed protein product [Oikopleura dioica]
Length = 226
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 112/217 (51%), Gaps = 21/217 (9%)
Query: 5 EKQLESSLESVVMKLNEIKSQLVGMLFKIDHD----RDSLNWPTFLDNFALLSGQFSAIA 60
EKQL+ ++ +V + ++K L G+L K+D + R+ NW + LD++AL++GQ +
Sbjct: 12 EKQLDHAILTVYNRSKDLKIALEGLLGKLDSELAQGREP-NWASLLDSYALITGQIETLT 70
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
+ L + P + N + P+ILNP R+E + RLTE RVP+ H++VPDY RTK +P VE
Sbjct: 71 RYLRSESAPRLVNTSCFPVILNPHRDEIVARLTEERVPSVNHEVVPDYFRTKPDPAVE-- 128
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLT-- 178
+Q E + + DA + I V D+V+K ++ E ++ +
Sbjct: 129 ALQKELNKDNSTIDAEK---------IKQVNDLVNKLADKIEVSLDSKRHNLENRRYNED 179
Query: 179 -DTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGG 214
DT+SL+ G GL + G P P P G
Sbjct: 180 DDTNSLIGTYYYGIGLTNVTSGARNP--PVTQQRPAG 214
>gi|313244128|emb|CBY14977.1| unnamed protein product [Oikopleura dioica]
Length = 202
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 21/200 (10%)
Query: 22 IKSQLVGMLFKIDHD----RDSLNWPTFLDNFALLSGQFSAIAKVLSHDKTPPIRNLTVL 77
+K L G+L K+D + R+ NW + LD++AL++GQ + + L + P + N +
Sbjct: 5 LKIALEGLLGKLDSELAQGREP-NWASLLDSYALITGQIETLTRYLRSESAPRLVNTSCF 63
Query: 78 PLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQ 137
P+ILNP R+E + RLTE RVP+ H++VPDY RTK +P VE +Q E + + DA +
Sbjct: 64 PVILNPHRDEIVARLTEERVPSVNHEVVPDYFRTKPDPAVE--ALQKELNKDNSTIDAEK 121
Query: 138 KQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLT---DTHSLVAAVGMGRGLK 194
I V D+V+K ++ E ++ + DT+SL+ G GL
Sbjct: 122 ---------IKQVNDLVNKLADKIEVSLDSKRHNLENRRYNEDDDTNSLIGTYYYGIGLT 172
Query: 195 MIMPGPGAPVGPGMMVAPGG 214
+ G P P P G
Sbjct: 173 NVTSGARNP--PVTQQRPAG 190
>gi|256073559|ref|XP_002573097.1| hypothetical protein [Schistosoma mansoni]
gi|353232464|emb|CCD79819.1| hypothetical protein Smp_016340 [Schistosoma mansoni]
Length = 197
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Query: 4 EEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKVL 63
E++QLE+ + ++ ++++K ++ ++ K + D +WP +L AL + + S I K+L
Sbjct: 5 EKRQLEN-VNTLYTAIHKLKQKIQDLVIKAETQGDQCDWPRYLSTLALCASELSEIRKIL 63
Query: 64 SHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQ 123
D+ L + P++LNPE++ L ++TE R+ F HD VP YLRTK +P VE +
Sbjct: 64 ESDRFSNEHTLVLTPMLLNPEQDTNLAKITEERLSLFNHDTVPQYLRTKLDPKVESECAS 123
Query: 124 LEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTHSL 183
+AA + + K N+ I L V+ +++ E++ R +S+L D +L
Sbjct: 124 QSTRAAGIPSEQVNKLINLSNRAIDCSLKEVNLLKQDLEADFSDRQNKI-SSNLDDLTTL 182
Query: 184 VAAVGMGRG 192
+ + +G
Sbjct: 183 INIISHKKG 191
>gi|170058022|ref|XP_001864740.1| mediator complex [Culex quinquefasciatus]
gi|167877250|gb|EDS40633.1| mediator complex [Culex quinquefasciatus]
Length = 338
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 66/108 (61%), Gaps = 17/108 (15%)
Query: 154 VSKAREEWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAP- 212
+ KA+EEW++EA +R G QTSSL DT +LVAAVG+G GL + M GPG PG+M+ P
Sbjct: 239 ILKAKEEWDTEASSRPGIQQTSSLADTQALVAAVGLGNGLTLPM-GPGGVPNPGLMIPPA 297
Query: 213 ---GGPGRPVGPGPGMPMGPGGQPMGMMGKNPSGIKTNIKAAAAIHPY 257
P V PG G MGK PSGIKTNIK+A +HPY
Sbjct: 298 IRQASPISAVSPGAG------------MGKMPSGIKTNIKSANQVHPY 333
>gi|29841400|gb|AAP06432.1| similar to GenBank Accession Number AK008759 CG13867 gene product
[Schistosoma japonicum]
Length = 197
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 4 EEKQLESS--LESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
E++QLE+ L + V KL K ++ ++ K + D +WP +L AL + + I K
Sbjct: 5 EKRQLENINILYTAVYKL---KQKIQDLVIKFETQGDQCDWPRYLSTLALCASELGEIRK 61
Query: 62 VLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKL 121
+L D+ L + P++LNPE + L ++TE R+ F HD VP YLRTK +P VE +
Sbjct: 62 ILESDRFSNEHTLVLTPIVLNPEHDANLAKITEERLSLFNHDTVPQYLRTKLDPKVESEC 121
Query: 122 IQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTH 181
+AAS+ D K N+ I L ++ +++ E++ R S+ D
Sbjct: 122 SSQATRAASIPSDQVNKLINLSNRAIDCSLKEINLLKQDLEADFSDRQNKI-ASNPDDLV 180
Query: 182 SLVAAVGMGRGL 193
+L+ + +GL
Sbjct: 181 TLMNFISRKKGL 192
>gi|312065443|ref|XP_003135793.1| hypothetical protein LOAG_00205 [Loa loa]
gi|307769047|gb|EFO28281.1| hypothetical protein LOAG_00205 [Loa loa]
Length = 244
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 21/235 (8%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
Q E ++L +++ + K ++K+ + +LF +D ++ + WP LD F+ L+ + +
Sbjct: 12 QHEPERLATAISHIENKALDVKTNIEQLLFMLDL-QEEVEWPDILDKFSSLASAMTQLQF 70
Query: 62 VLSHDKTPP--------IRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQ 113
+L P +R ++P L+ + + L + T R+ + HD+ PDYLRTK
Sbjct: 71 ILKKSALPSGFEDFGFFLRTHVLVPHCLSNDIDPNLQQATSNRIHCWNHDVCPDYLRTKL 130
Query: 114 EPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVL-DIVSKAREEWESEAGARGGTG 172
P+VE ++++ + ++D KQ NK + +L + AR + E + +G
Sbjct: 131 TPEVEADESHIDNEKNTRTFDQVNKQILAMNKHVETLLASMAENARSQTEIQQDVPTYSG 190
Query: 173 QTSSLTDTHSLVAAVGMGRGL---KMIMPGPGAPVGPGMMVAPGG---PGRPVGP 221
Q DT LV AV G GL K ++P G G + + G PG P
Sbjct: 191 Q-----DTQKLVRAVVNGEGLRPSKTLVPPEGGVTGTSVSGSHGAVRTPGMTASP 240
>gi|288558816|sp|P0C5E6.2|MED8_CAEBR RecName: Full=Mediator of RNA polymerase II transcription subunit
8; AltName: Full=Mediator complex subunit 8
Length = 294
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 13/239 (5%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
Q E +++ + + ++ ++ + K + +L +D ++ WP L+ F+ L+ +++
Sbjct: 17 QSEPEKIGQATDMMIKRVTDAKKMIEELLQMLDL-QEKCPWPDMLEKFSSLASAMASLQT 75
Query: 62 VLSHDKTPP--------IRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQ 113
+ P +R+ ++P L E +E LLR+T+GRV ++ H+LVP+YLRTK
Sbjct: 76 SVRKSGLPHGHEDHGQFLRSHVLVPQRLQYEPDEALLRVTQGRVFSWNHELVPEYLRTKP 135
Query: 114 EPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQ 173
P++E++ L+ + ++ + D KQ A +NK I +L +S + SEA
Sbjct: 136 NPEMENEEQMLDMERSAKAPDLVVKQIAAYNKNIEGLLGSLSNI-DRLHSEAIIEKP--- 191
Query: 174 TSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQ 232
T S +T LV ++ +G ++ + P M APG G M PG Q
Sbjct: 192 THSREETMKLVKSILLGEAIRTLRTAGAPPTSTPMPAAPGSAGPSQSGSQVMNQAPGMQ 250
>gi|170591098|ref|XP_001900308.1| CG13867-PA [Brugia malayi]
gi|158592458|gb|EDP31058.1| CG13867-PA, putative [Brugia malayi]
Length = 243
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 17/230 (7%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
Q E ++L ++ + K ++K+ + +LF +D ++ + WP LD F+ L+ + +
Sbjct: 12 QHEPERLAGAISHIENKALDVKTNIEQLLFMLDL-QEEVEWPDMLDKFSSLASAMTQLQF 70
Query: 62 VLSHDKTPP--------IRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQ 113
+L P +R ++P L+ + + L + T R+ + HD PDYLRTK
Sbjct: 71 ILKKSALPSGFEDFGFFLRTHVLVPHCLSNDIDPNLQQATSNRIHCWNHDAAPDYLRTKL 130
Query: 114 EPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQ 173
P+VE ++++ + ++D KQ NK H+ +++ E S+A +
Sbjct: 131 TPEVEADESHIDNEKNTRTFDQVNKQILAMNK---HIETLLTSMAENARSQAEIQQDIPT 187
Query: 174 TSSLTDTHSLVAAVGMGRGL---KMIMPGPGAPVGPGMMVAPGGPGRPVG 220
+S DT LV A+ G GL K ++ G+ G G + G RP G
Sbjct: 188 YNS-QDTQKLVRAIVNGEGLRPSKTLVSAEGSLTG-GSVSGSHGAVRPPG 235
>gi|268531932|ref|XP_002631094.1| C. briggsae CBR-AGE-1 protein [Caenorhabditis briggsae]
Length = 1397
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 13/239 (5%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
Q E +++ + + ++ ++ + K + +L +D ++ WP L+ F+ L+ +++
Sbjct: 17 QSEPEKIGQATDMMIKRVTDAKKMIEELLQMLDL-QEKCPWPDMLEKFSSLASAMASLQT 75
Query: 62 VLSHDKTPP--------IRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQ 113
+ P +R+ ++P L E +E LLR+T+GRV ++ H+LVP+YLRTK
Sbjct: 76 SVRKSGLPHGHEDHGQFLRSHVLVPQRLQYEPDEALLRVTQGRVFSWNHELVPEYLRTKP 135
Query: 114 EPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQ 173
P++E++ L+ + ++ + D KQ A +NK I +L +S + SEA
Sbjct: 136 NPEMENEEQMLDMERSAKAPDLVVKQIAAYNKNIEGLLGSLSNI-DRLHSEAIIEKP--- 191
Query: 174 TSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQ 232
T S +T LV ++ +G ++ + P M APG G M PG Q
Sbjct: 192 THSREETMKLVKSILLGEAIRTLRTAGAPPTSTPMPAAPGSAGPSQSGSQVMNQAPGMQ 250
>gi|313223178|emb|CBY43400.1| unnamed protein product [Oikopleura dioica]
Length = 210
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 37/217 (17%)
Query: 5 EKQLESSLESVVMKLNEIKSQLVGMLFKIDHD----RDSLNWPTFLDNFALLSGQFSAIA 60
EKQL+ ++ +V + ++K L G+L K+D + R+ NW + LD++AL++GQ +
Sbjct: 12 EKQLDHAISTVYNRSKDLKIALEGLLGKLDSELAQGREP-NWASLLDSYALITGQIETLT 70
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
+ L + P + N ++L RVP+ H++VPDY RTK +P VE
Sbjct: 71 RYLRSESAPRLVNTSLLS----------------KRVPSVNHEVVPDYFRTKPDPAVE-- 112
Query: 121 LIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLT-- 178
+Q E + + DA + I V D+V+K ++ E ++ +
Sbjct: 113 ALQKELNKDNSTIDAEK---------IKQVNDLVNKLADKIEVSLDSKRHNLENRRYNED 163
Query: 179 -DTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGG 214
DT+SL+ G GL + G P P P G
Sbjct: 164 DDTNSLIGTYYYGIGLTNVTSGARNP--PVTQQRPAG 198
>gi|324506605|gb|ADY42817.1| Mediator of RNA polymerase II transcription subunit 8 [Ascaris
suum]
Length = 235
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
Q + ++ ++ + K +IKS + +LF +D ++ + WP LD F+ L+ + +
Sbjct: 12 QEDPEKFTQAVAHIESKALDIKSNIEQLLFMLDL-QEKVPWPEMLDKFSSLASAMAQLQS 70
Query: 62 VLSHDKTPP--------IRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQ 113
VL P +R ++P L+ + + L + T+ RV + HD+ PDYLRTK
Sbjct: 71 VLRKSALPSGVKDFGKLLRKHLLVPHRLSNDIDANLQQSTQNRVHCWNHDVAPDYLRTKP 130
Query: 114 EPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQ 173
P++E QL+ + S ++D KQ NK H+ +++ + S+A A
Sbjct: 131 TPEMEADEAQLDSEKNSRTFDQVNKQIVAMNK---HLESLLNSLADNARSQADAHADVP- 186
Query: 174 TSSLTDTHSLVAAVGMGR 191
T + DT LV AV GR
Sbjct: 187 TYNNHDTQKLVRAVINGR 204
>gi|339240117|ref|XP_003375984.1| mediator of RNA polymerase II transcription subunit 8 [Trichinella
spiralis]
gi|316975325|gb|EFV58771.1| mediator of RNA polymerase II transcription subunit 8 [Trichinella
spiralis]
Length = 175
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
Query: 61 KVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHK 120
++L D+ +N LP+ L+ E + +L TE R+ A+TH +VPDYLRTK +P VE K
Sbjct: 3 QLLRSDRASHFKNYVFLPIRLSVEVDADLEAATENRLHAWTHAVVPDYLRTKPDPQVEQK 62
Query: 121 LIQLEHKAAS--LSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLT 178
Q+ ++ + ++ QKQ FN+ + +LD ++ + + E + T +TS
Sbjct: 63 DQQISNQVQQRICNPESLQKQITAFNRCLNCILDSLNASIRDSEMDG---SKTSKTSDGE 119
Query: 179 DTHSLVAAVGMGRGLK 194
DT LVAA+ G+ +K
Sbjct: 120 DTALLVAAILKGQNVK 135
>gi|341889000|gb|EGT44935.1| CBN-MDT-8 protein [Caenorhabditis brenneri]
Length = 325
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 102/201 (50%), Gaps = 13/201 (6%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
Q E +++ + + ++ ++ + K + +L +D ++ WP L+ F+ L+ S +
Sbjct: 10 QSEPEKISQATDMMIKRVTDAKKMIEELLQMLDL-QEKCPWPPMLEKFSTLASAMSTLQA 68
Query: 62 VLSHDKTPP--------IRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQ 113
+ P +R+ ++P L E ++ L R+T+GRV ++ H LVP+YLRTK
Sbjct: 69 SVRKSGLPHGHEDYGQFLRSHVLVPQRLQYEPDDNLQRVTQGRVFSWNHALVPEYLRTKP 128
Query: 114 EPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQ 173
P++E + L+ + ++ + D +Q A +NK I +++ ++ ++ SEA
Sbjct: 129 NPEMESEENLLDSERSAKAADLVVRQIAAYNKNIDGLMNNLTSI-DKLHSEATMEKP--- 184
Query: 174 TSSLTDTHSLVAAVGMGRGLK 194
T + +T LV V G GL+
Sbjct: 185 TYARDETTRLVKCVLTGEGLR 205
>gi|38047663|gb|AAR09734.1| similar to Drosophila melanogaster CG13867, partial [Drosophila
yakuba]
Length = 83
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 58/92 (63%), Gaps = 11/92 (11%)
Query: 170 GTGQTSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPG--GPGRPVGPGPGMPM 227
G QTSS+ DT LVAAVGMG+GLK+ GP GPGMMV P P P+G GP M
Sbjct: 1 GIQQTSSMADTQLLVAAVGMGKGLKLTNYGP----GPGMMVPPSIRAP-SPMG-GPAMSP 54
Query: 228 GPGGQPMGMMGKNPSGIKTNIKAAAAIHPYSR 259
G Q +GK PS +KTNIK+A +HP+SR
Sbjct: 55 GNVQQ---QLGKAPSAVKTNIKSANQVHPFSR 83
>gi|32564415|ref|NP_496464.2| Protein MDT-8, isoform a [Caenorhabditis elegans]
gi|6018414|emb|CAB57912.1| Protein MDT-8, isoform a [Caenorhabditis elegans]
Length = 325
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 115/241 (47%), Gaps = 19/241 (7%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
Q E +++ + + ++ ++ + K +++ L ++ ++ WP L+ F+ L+ S++
Sbjct: 15 QGEPEKIAQATDMMIKRVTDAK-KIIEELLQMLDLQEKCPWPLMLEKFSTLASFMSSLQS 73
Query: 62 VLSHDKTPP--------IRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQ 113
+ P +R+ ++ L E +E L R T+GRV ++ H LVP+YLRTK
Sbjct: 74 SVRKSGMPHGHEDYGQFLRSHVLVTQRLQYEPDETLQRATQGRVMSWNHALVPEYLRTKP 133
Query: 114 EPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQ 173
P++E++ L+ + ++ S D +Q A +NK I +++ ++ + +EA
Sbjct: 134 NPEMENEEGMLDGERSAKSADLVVRQIAAYNKNIEGLINHLNSV-DRMHTEAAIEKP--- 189
Query: 174 TSSLTDTHSLVAAVGMGRGLKMIMP-GPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQ 232
T + +T +V ++ G G++ P P M AP GP P+ G Q
Sbjct: 190 TYNRDETAKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSS----TGPSSSQPIS-GNQ 244
Query: 233 P 233
P
Sbjct: 245 P 245
>gi|32564417|ref|NP_496463.2| Protein MDT-8, isoform b [Caenorhabditis elegans]
gi|75025285|sp|Q9U1W2.1|MED8_CAEEL RecName: Full=Mediator of RNA polymerase II transcription subunit
8; AltName: Full=Mediator complex subunit 8
gi|6018415|emb|CAB57913.1| Protein MDT-8, isoform b [Caenorhabditis elegans]
Length = 297
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 115/241 (47%), Gaps = 19/241 (7%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAK 61
Q E +++ + + ++ ++ + K +++ L ++ ++ WP L+ F+ L+ S++
Sbjct: 15 QGEPEKIAQATDMMIKRVTDAK-KIIEELLQMLDLQEKCPWPLMLEKFSTLASFMSSLQS 73
Query: 62 VLSHDKTPP--------IRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQ 113
+ P +R+ ++ L E +E L R T+GRV ++ H LVP+YLRTK
Sbjct: 74 SVRKSGMPHGHEDYGQFLRSHVLVTQRLQYEPDETLQRATQGRVMSWNHALVPEYLRTKP 133
Query: 114 EPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQ 173
P++E++ L+ + ++ S D +Q A +NK I +++ ++ + +EA
Sbjct: 134 NPEMENEEGMLDGERSAKSADLVVRQIAAYNKNIEGLINHLNSV-DRMHTEAAIEKP--- 189
Query: 174 TSSLTDTHSLVAAVGMGRGLKMIMP-GPGAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQ 232
T + +T +V ++ G G++ P P M AP GP P+ G Q
Sbjct: 190 TYNRDETAKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSS----TGPSSSQPIS-GNQ 244
Query: 233 P 233
P
Sbjct: 245 P 245
>gi|358342298|dbj|GAA49793.1| mediator of RNA polymerase II transcription subunit 8 [Clonorchis
sinensis]
Length = 118
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 79 LILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQK 138
++LNPE + L + TE R+ F HD VP YLRTK +P +E + + +A+++ D K
Sbjct: 1 MLLNPEPDPTLAKATEDRLALFNHDTVPQYLRTKLDPKLESQCLAQSSRASAVPSDQMTK 60
Query: 139 QAATFNKVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGL 193
N+ + L V+ ++E E++ R + T S+ D ++L++ V G+GL
Sbjct: 61 LINQTNRAVDASLKEVTLLKQELEADFSDR-HSKITGSVEDFNALLSLVISGKGL 114
>gi|357198073|gb|AET63297.1| MDT-8 [Caenorhabditis remanei]
Length = 332
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 13/223 (5%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSG-----QF 56
Q E +++ + + ++ ++ + K + +L +D ++ WP L+ F+ L+ Q
Sbjct: 17 QGEPEKIAQATDMMIKRVTDAKKMIEELLQMLDL-QEKCPWPDMLEKFSSLASAMSSLQT 75
Query: 57 SAIAKVLSH---DKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQ 113
S L H D +R+ ++ L E +E L+R T+GRV ++ H LVP+YLRTK
Sbjct: 76 SVRKSGLPHGHEDYGQFLRSHVLVTQRLQYENDEALMRATQGRVFSWNHALVPEYLRTKP 135
Query: 114 EPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQ 173
P++E++ L+ + ++ + D +Q +NK I +L+ + + SEA
Sbjct: 136 NPEMENEEQMLDGERSAKAADLVVRQIVAYNKNIEGLLNNLMNI-DRLHSEAIIEKP--- 191
Query: 174 TSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPG 216
T + +T +V ++ G G++ P M V PG G
Sbjct: 192 THNREETTKIVKSILTGEGIRTQRVVAPPPSTTPMSVPPGSAG 234
>gi|357198001|gb|AET63234.1| MDT-8 [Caenorhabditis remanei]
gi|357198017|gb|AET63248.1| MDT-8 [Caenorhabditis remanei]
gi|357198033|gb|AET63262.1| MDT-8 [Caenorhabditis remanei]
gi|357198065|gb|AET63290.1| MDT-8 [Caenorhabditis remanei]
gi|357198081|gb|AET63304.1| MDT-8 [Caenorhabditis remanei]
gi|357198089|gb|AET63311.1| MDT-8 [Caenorhabditis remanei]
gi|357198097|gb|AET63318.1| MDT-8 [Caenorhabditis remanei]
gi|357198105|gb|AET63325.1| MDT-8 [Caenorhabditis remanei]
gi|357198188|gb|AET63370.1| MDT-8 [Caenorhabditis remanei]
gi|357198190|gb|AET63371.1| MDT-8 [Caenorhabditis remanei]
Length = 332
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 13/223 (5%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSG-----QF 56
Q E +++ + + ++ ++ + K + +L +D ++ WP L+ F+ L+ Q
Sbjct: 17 QGEPEKIAQATDMMIKRVTDAKKMIEELLQMLDL-QEKCPWPDMLEKFSSLASAMSSLQT 75
Query: 57 SAIAKVLSH---DKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQ 113
S L H D +R+ ++ L E +E L+R T+GRV ++ H LVP+YLRTK
Sbjct: 76 SVRKSGLPHGHEDYGQFLRSHVLVTQRLQYENDEALMRATQGRVFSWNHALVPEYLRTKP 135
Query: 114 EPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQ 173
P++E++ L+ + ++ + D +Q +NK I +L+ + + SEA
Sbjct: 136 NPEMENEEQMLDGERSAKAADLVVRQIVAYNKNIEGLLNNLMNI-DRLHSEAIIEKP--- 191
Query: 174 TSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPG 216
T + +T +V ++ G G++ P M V PG G
Sbjct: 192 THNREETTKIVKSILTGEGIRTQRVVAPPPSTTPMSVPPGSAG 234
>gi|357198009|gb|AET63241.1| MDT-8 [Caenorhabditis remanei]
gi|357198025|gb|AET63255.1| MDT-8 [Caenorhabditis remanei]
gi|357198041|gb|AET63269.1| MDT-8 [Caenorhabditis remanei]
gi|357198049|gb|AET63276.1| MDT-8 [Caenorhabditis remanei]
gi|357198113|gb|AET63332.1| MDT-8 [Caenorhabditis remanei]
Length = 332
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 13/223 (5%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSG-----QF 56
Q E +++ + + ++ ++ + K + +L +D ++ WP L+ F+ L+ Q
Sbjct: 17 QGEPEKIAQATDMMIKRVTDAKKMIEELLQMLDL-QEKCPWPDMLEKFSSLASAMSSLQT 75
Query: 57 SAIAKVLSH---DKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQ 113
S L H D +R+ ++ L E +E L+R T+GRV ++ H LVP+YLRTK
Sbjct: 76 SVRKSGLPHGHEDYGQFLRSHVLVTQRLQYENDEALMRATQGRVFSWNHALVPEYLRTKP 135
Query: 114 EPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQ 173
P++E++ L+ + ++ + D +Q +NK I +L+ + + SEA
Sbjct: 136 NPEMENEEQMLDGERSAKAADLVVRQIVAYNKNIEGLLNNLMNI-DRLHSEAIIEKP--- 191
Query: 174 TSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPG 216
T + +T +V ++ G G++ P M V PG G
Sbjct: 192 THNREETTKIVKSILTGEGIRTQRVVAPPPSTTPMSVPPGSAG 234
>gi|308510574|ref|XP_003117470.1| CRE-MDT-8 protein [Caenorhabditis remanei]
gi|308242384|gb|EFO86336.1| CRE-MDT-8 protein [Caenorhabditis remanei]
Length = 332
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 13/223 (5%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSG-----QF 56
Q E +++ + + ++ ++ + K + +L +D ++ WP L+ F+ L+ Q
Sbjct: 17 QGEPEKIAQATDMMIKRVTDAKKMIEELLQMLDL-QEKCPWPDMLEKFSSLASAMSSLQT 75
Query: 57 SAIAKVLSH---DKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQ 113
S L H D +R+ ++ L E +E L+R T+GRV ++ H LVP+YLRTK
Sbjct: 76 SVRKSGLPHGHEDYGQFLRSHVLVTQRLQYENDEALMRATQGRVFSWNHALVPEYLRTKP 135
Query: 114 EPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQ 173
P++E++ L+ + ++ + D +Q +NK I +L+ + + SEA
Sbjct: 136 NPEMENEEQMLDGERSAKAADLVVRQIVAYNKNIEGLLNNLMNI-DRLHSEAIIEKP--- 191
Query: 174 TSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPG 216
T + +T +V ++ G G++ P M V PG G
Sbjct: 192 THNREETTKIVKSILTGEGIRTQRVVAPPPSTTPMSVPPGSAG 234
>gi|357198057|gb|AET63283.1| MDT-8 [Caenorhabditis remanei]
Length = 332
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 13/223 (5%)
Query: 2 QREEKQLESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSG-----QF 56
Q E +++ + + ++ ++ + K + +L +D ++ WP L+ F+ L+ Q
Sbjct: 17 QGEPEKIAQATDMMIKRVTDAKKMIEELLQMLDL-QEKCPWPDMLEKFSSLASAMSSLQT 75
Query: 57 SAIAKVLSH---DKTPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQ 113
S L H D +R+ ++ L E +E L+R T+GRV ++ H LVP+YLRTK
Sbjct: 76 SVRKSGLPHGHEDYGQFLRSHVLVTQRLQYENDEALMRATQGRVFSWNHALVPEYLRTKP 135
Query: 114 EPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAREEWESEAGARGGTGQ 173
P++E++ L+ + ++ + D +Q +NK I +L+ + + SEA
Sbjct: 136 NPEMENEEQMLDGERSAKAADLVVRQIVAYNKNIEGLLNNLMNI-DRLHSEAIIEKP--- 191
Query: 174 TSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVGPGMMVAPGGPG 216
T + +T +V ++ G G++ P M V PG G
Sbjct: 192 THNREETTKIVKSILTGEGIRTQRVVAPPPSTTPMSVPPGSAG 234
>gi|402592679|gb|EJW86606.1| hypothetical protein WUBG_02488 [Wuchereria bancrofti]
Length = 164
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 93 TEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLD 152
T R+ + HD PDYLRTK P+VE ++++ + ++D KQ NK H+
Sbjct: 31 TSNRIHCWNHDAAPDYLRTKLTPEVEADESHIDNEKNTRTFDQVNKQILAMNK---HIET 87
Query: 153 IVSKAREEWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGL---KMIMPGPGAPVGPGMM 209
+++ E S+A + +S DT LV AV G GL K ++ G+ G +
Sbjct: 88 LLTSMAENARSQAEIQQDIPTYNS-QDTQKLVRAVVNGEGLRPSKTLISAEGSLTGSSVS 146
Query: 210 VAPGG---PGRPVGP 221
+ G PG P
Sbjct: 147 GSHGAVRPPGTTASP 161
>gi|326430337|gb|EGD75907.1| hypothetical protein PTSG_00616 [Salpingoeca sp. ATCC 50818]
Length = 167
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 8 LESSLESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKVLSHDK 67
L +L++++ K I+ +L M + S P + L+ GQ + L +
Sbjct: 7 LRLTLDALLSKATAIQDELYKMRSTLKTSSPSCTLPLVV----LVPGQIEVLMMSLRRRE 62
Query: 68 TPPIRNLTVLPLILNPEREEELLRLTEGRVPAFTHDLVPDYLRTKQEPDVEHKLIQLEHK 127
P + N ++P ++ E +E L +T G V +FTHD P LRTK +P++E +L +
Sbjct: 63 HPDLHNRVLVPKAMSTELDEHLQSVTSGVVSSFTHDKAPVLLRTKADPELEAELEDAYEE 122
Query: 128 AASLSYDAAQK-----QAATFNKVITHVLDIVSKAREEWE 162
+A + +K + + + VLD ++ ++E E
Sbjct: 123 SAEAAETGREKVPPAEALSALDHTCSRVLDFLNSQKKEVE 162
>gi|167537243|ref|XP_001750291.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771281|gb|EDQ84950.1| predicted protein [Monosiga brevicollis MX1]
Length = 226
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 12 LESVVMKLNEIKSQLVGMLFKIDHDRDSLNWPTFLDNFALLSGQFSAIAKVLS-HDKTPP 70
L+ V +L++IK L + FK++ D + +W L +F+ + Q A+ L +D T
Sbjct: 12 LQQVTPRLHQIKQDLHLLHFKLEQD-PTFSWENALTSFSSIQKQLQALLVNLKVNDLTNQ 70
Query: 71 IRNL---TVLPLILNPEREEELLRLTEGRVPAFTH 102
R L VLP L+ ER+E L +T+G + AFTH
Sbjct: 71 QRQLHDVVVLPFSLSHERDEHLHSMTQGSIDAFTH 105
>gi|345508303|ref|ZP_08787934.1| hypothetical protein BSAG_02345 [Bacteroides sp. D1]
gi|345455118|gb|EEO50634.2| hypothetical protein BSAG_02345 [Bacteroides sp. D1]
Length = 883
Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGGQ--PMGMMGKNP 241
GP PVGP V P GP PVGP GP P+GP G P G GK+P
Sbjct: 128 GPVGPVGPEGSVGPVGPEGPVGPVGPEGPIGPVGPEGPAGPAGKSP 173
Score = 39.7 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGGQ--PMGMMG-KNPSG 243
GP PVGP V P GP VGP GP P+GP G P+G +G + P+G
Sbjct: 119 GPVGPVGPEGPVGPVGPEGSVGPVGPEGPVGPVGPEGPIGPVGPEGPAG 167
>gi|262409041|ref|ZP_06085586.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294807149|ref|ZP_06765966.1| collagen triple helix repeat protein [Bacteroides xylanisolvens SD
CC 1b]
gi|262353252|gb|EEZ02347.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294445649|gb|EFG14299.1| collagen triple helix repeat protein [Bacteroides xylanisolvens SD
CC 1b]
gi|295087868|emb|CBK69391.1| Collagen triple helix repeat (20 copies). [Bacteroides
xylanisolvens XB1A]
Length = 875
Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGGQ--PMGMMGKNP 241
GP PVGP V P GP PVGP GP P+GP G P G GK+P
Sbjct: 120 GPVGPVGPEGSVGPVGPEGPVGPVGPEGPIGPVGPEGPAGPAGKSP 165
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGGQ--PMGMMG-KNPSG 243
GP PVGP V P GP VGP GP P+GP G P+G +G + P+G
Sbjct: 111 GPVGPVGPEGPVGPVGPEGSVGPVGPEGPVGPVGPEGPIGPVGPEGPAG 159
>gi|237723038|ref|ZP_04553519.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229447560|gb|EEO53351.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 826
Score = 43.5 bits (101), Expect = 0.098, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGGQ--PMGMMGKNP 241
GP PVGP V P GP P GP GP P+GP G P G GK+P
Sbjct: 71 GPEGPVGPEGPVGPEGPVGPEGPVGPEGPVGPEGPVGPAGPAGKSP 116
>gi|221060983|ref|XP_002262061.1| FF domain containing protein [Plasmodium knowlesi strain H]
gi|193811211|emb|CAQ41939.1| FF domain containing protein, putative [Plasmodium knowlesi strain
H]
Length = 862
Score = 42.7 bits (99), Expect = 0.16, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 200 PGAPVGPGMMVAPGGPGRPVGPG-PGMPMGPG-----GQPMGMMGKNPSGIKTN 247
PG P PG+ PG PG P PG PGMP PG G PM G N SG N
Sbjct: 11 PGLPGLPGIPGLPGMPGLPNMPGLPGMPGLPGIPNMSGHPMNGQGMNNSGPYMN 64
>gi|298484439|ref|ZP_07002595.1| conserved hypothetical protein [Bacteroides sp. D22]
gi|298269412|gb|EFI11017.1| conserved hypothetical protein [Bacteroides sp. D22]
Length = 857
Score = 41.2 bits (95), Expect = 0.40, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGGQPMGMMGKNP 241
G PVGP V P GP PVGP GP P+GP G P G GK+P
Sbjct: 108 GATGPVGP---VGPEGPVGPVGPEGPVGPVGPEG-PAGPAGKSP 147
>gi|156386375|ref|XP_001633888.1| predicted protein [Nematostella vectensis]
gi|156220964|gb|EDO41825.1| predicted protein [Nematostella vectensis]
Length = 785
Score = 40.8 bits (94), Expect = 0.57, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGGQPMGMMG-KNPSG 243
GP P GP P GP P GP GP P GP G P G G + PSG
Sbjct: 91 GPNGPQGPNGPQGPNGPQGPNGPQGPNGPQGPNG-PQGPSGPQGPSG 136
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP----GPGMPMGPGGQPMGMMGKN-PSG 243
GP P GP P GP P GP GP +P GP G P G G N P G
Sbjct: 109 GPNGPQGPNGPQGPNGPQGPSGPQGPSGPQVPNGPQG-PSGPQGPNGPQG 157
>gi|260787348|ref|XP_002588715.1| hypothetical protein BRAFLDRAFT_129295 [Branchiostoma floridae]
gi|229273884|gb|EEN44726.1| hypothetical protein BRAFLDRAFT_129295 [Branchiostoma floridae]
Length = 1338
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 190 GRGLKMIMPGP-GAPVGPGMMVAPGGPGRPVGPGPGMPMGPGGQPM 234
G L + PGP GAPV PG AP PG PV PG P+GP Q M
Sbjct: 774 GGNLTSVAPGPAGAPVAPGPAGAPVAPGTPV--APGTPVGPQQQIM 817
>gi|332025170|gb|EGI65350.1| ATP-dependent helicase brm [Acromyrmex echinatior]
Length = 1953
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
Query: 194 KMIMPGPGAPVGPGMMVAPGGPGRPVGP----------GPGMPMGPGGQPMGMMGKNPSG 243
+M M PG +GPG + P G G +GP GPG MGPG P+G +G N G
Sbjct: 317 QMSMNAPGGQMGPGNQMGPAGTGNQMGPSAPGSQMGPTGPGGQMGPGSGPVGQLGPNSLG 376
>gi|320166204|gb|EFW43103.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 275
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
Query: 40 LNWPTFLDNFALLSGQFSAIAKVLSHDKTPPIRNLTVLPLILNPEREEELLRLTEGRVPA 99
+ W + F++L GQ LS + P L ++P + +R+ E+ T+GR+ A
Sbjct: 56 IQWQDVVSKFSVLLGQTHNFVNQLS--RLPAPYELALVPGQFSSKRDPEVEVATQGRISA 113
Query: 100 FTHDLVPDY-LRTKQEPDVEHKLIQLEHKAASLSYDAAQKQAATFNKVITHVLDIVSKAR 158
D++PD LR++ P++E + AA+L D +Q + +D + +
Sbjct: 114 VKPDVIPDVLLRSRPPPELEVYAAPFKSAAAALREDV--RQHLVTDDAQAMDMDAIDQPS 171
Query: 159 EEWESEAGARGGTGQTSSLTDTHSLVAAVGMGRGLKMIMPGPGAPVG 205
+ + + G +S D +AAV R L P+G
Sbjct: 172 MQQQEDEMITGAVDSHNSFVD--ECLAAVERARALNDQEAAESEPLG 216
>gi|332841029|ref|XP_003314122.1| PREDICTED: protein PCOTH isoform 2 [Pan troglodytes]
Length = 139
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGG 231
GP +P+GPG + P GPG+P GP GP +P+GP G
Sbjct: 93 GPASPLGPGFPIGPMGPGKPAGPKGPMLPLGPSG 126
>gi|397526339|ref|XP_003833088.1| PREDICTED: protein PCOTH [Pan paniscus]
Length = 116
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGG 231
GP +P+GPG + P GPG+PVGP GP +P+GP G
Sbjct: 70 GPASPLGPGFPIGPMGPGKPVGPKGPVLPLGPSG 103
>gi|209447093|ref|NP_001129288.1| protein PCOTH isoform 2 [Homo sapiens]
Length = 116
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGG 231
GP +P+GPG + P GPG+PVGP GP +P+GP G
Sbjct: 70 GPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
>gi|310796222|gb|EFQ31683.1| hypothetical protein GLRG_06658 [Glomerella graminicola M1.001]
Length = 436
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 145 KVITHVLDIVSKAREEWESEAGARGGTGQTSSLTDTHSLVAAV-GMGRGLKMIMPGPGAP 203
K +T +++K EE +S++ +G LTD ++ VAAV +G G ++PGPG
Sbjct: 134 KAVTGAHKVINKLHEELQSQSDF---SGSVKDLTDVYAKVAAVLNIGAGAASVLPGPGPL 190
Query: 204 VGPGMMVAPGGPGRPVGPGPGMP 226
VG + G G P P
Sbjct: 191 VGGALTSVAGIFGLAALDAPADP 213
>gi|117594|sp|P06914.1|CSP_PLAYO RecName: Full=Circumsporozoite protein; Short=CS; Flags: Precursor
gi|72382|pir||OZZQMY circumsporozoite protein precursor - Plasmodium yoelii
gi|160223|gb|AAA29558.1| circumsporozoite protein [Plasmodium yoelii]
gi|225519|prf||1305264A circumsporozoite protein
Length = 367
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 23/36 (63%), Gaps = 7/36 (19%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP----GPGMPMGPG 230
GPGAP GPG AP GPG P GP GPG P GPG
Sbjct: 140 GPGAPQGPG---APQGPGAPQGPGAPQGPGAPQGPG 172
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 23/36 (63%), Gaps = 7/36 (19%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP----GPGMPMGPG 230
GPGAP GPG AP GPG P GP GPG P GPG
Sbjct: 152 GPGAPQGPG---APQGPGAPQGPGAPQGPGAPQGPG 184
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 23/36 (63%), Gaps = 7/36 (19%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP----GPGMPMGPG 230
GPGAP GPG AP GPG P GP GPG P GPG
Sbjct: 164 GPGAPQGPG---APQGPGAPQGPGAPQGPGAPQGPG 196
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 23/36 (63%), Gaps = 7/36 (19%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP----GPGMPMGPG 230
GPGAP GPG AP GPG P GP GPG P GPG
Sbjct: 188 GPGAPQGPG---APQGPGAPQGPGAPQGPGAPQGPG 220
>gi|297693670|ref|XP_002824131.1| PREDICTED: protein PCOTH [Pongo abelii]
gi|426374929|ref|XP_004054307.1| PREDICTED: protein PCOTH isoform 1 [Gorilla gorilla gorilla]
Length = 116
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGG 231
GP +P+GPG + P GPG+PVGP GP +P+GP G
Sbjct: 70 GPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
>gi|332248037|ref|XP_003273167.1| PREDICTED: protein PCOTH-like [Nomascus leucogenys]
Length = 116
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGG 231
GP +P+GPG+ + P GPG+PVGP GP +P+GP G
Sbjct: 70 GPASPLGPGVPIGPMGPGKPVGPKGPMLPLGPSG 103
>gi|66356698|ref|XP_625527.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46226510|gb|EAK87504.1| large low complexity protein with repeats [Cryptosporidium parvum
Iowa II]
Length = 1146
Score = 37.0 bits (84), Expect = 7.7, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Query: 200 PGAPVGPGMMVAPGGPGRPVGPG----PGMPMGPGGQPMGMMGKNPSGI 244
P P PGM PGG P PG PG+P GPGGQ P G+
Sbjct: 141 PVVPSWPGM---PGGTSGPAMPGGTTKPGVPSGPGGQEASKPIAVPGGV 186
>gi|146325953|gb|AAI40048.1| Prostate collagen triple helix [synthetic construct]
Length = 108
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGG 231
GP +P+GPG + P GPG+PVGP GP +P+GP G
Sbjct: 61 GPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 94
>gi|62234340|ref|NP_001014442.2| protein PCOTH isoform 1 [Homo sapiens]
gi|189029598|sp|Q58A44.2|PCOTH_HUMAN RecName: Full=Protein PCOTH; AltName: Full=Prostate collagen triple
helix protein
Length = 107
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 199 GPGAPVGPGMMVAPGGPGRPVGP-GPGMPMGPGG 231
GP +P+GPG + P GPG+PVGP GP +P+GP G
Sbjct: 61 GPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 94
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,511,211,449
Number of Sequences: 23463169
Number of extensions: 225798006
Number of successful extensions: 1093834
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 3709
Number of HSP's that attempted gapping in prelim test: 953624
Number of HSP's gapped (non-prelim): 120464
length of query: 259
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 120
effective length of database: 9,097,814,876
effective search space: 1091737785120
effective search space used: 1091737785120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 75 (33.5 bits)