Query psy18173
Match_columns 191
No_of_seqs 103 out of 1028
Neff 7.3
Searched_HMMs 46136
Date Sat Aug 17 00:33:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18173.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18173hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07079 ALDH_F18-19_ProA-GPR G 100.0 1.3E-47 2.9E-52 339.7 21.0 177 11-190 100-280 (406)
2 TIGR00407 proA gamma-glutamyl 100.0 2.6E-47 5.6E-52 337.0 21.9 179 10-190 93-274 (398)
3 PRK00197 proA gamma-glutamyl p 100.0 1.7E-46 3.6E-51 333.7 21.5 177 11-190 106-286 (417)
4 PRK15398 aldehyde dehydrogenas 100.0 1.4E-46 3.1E-51 338.2 20.6 168 14-184 123-295 (465)
5 cd07121 ALDH_EutE Ethanolamine 100.0 1.2E-46 2.7E-51 335.7 19.5 168 14-184 91-263 (429)
6 COG1012 PutA NAD-dependent ald 100.0 2.6E-46 5.6E-51 336.8 19.6 171 11-187 124-301 (472)
7 cd07130 ALDH_F7_AASADH NAD+-de 100.0 3.8E-46 8.3E-51 336.0 20.7 175 13-188 125-305 (474)
8 PLN02315 aldehyde dehydrogenas 100.0 5.9E-46 1.3E-50 337.3 21.0 175 13-188 147-327 (508)
9 cd07086 ALDH_F7_AASADH-like NA 100.0 7.6E-46 1.6E-50 334.3 20.5 175 13-188 126-306 (478)
10 cd07081 ALDH_F20_ACDH_EutE-lik 100.0 9.1E-46 2E-50 330.8 20.5 171 12-185 87-262 (439)
11 PRK11241 gabD succinate-semial 100.0 1.6E-45 3.5E-50 332.7 20.4 172 12-188 138-316 (482)
12 PLN02766 coniferyl-aldehyde de 100.0 3.5E-45 7.7E-50 331.8 20.2 173 11-188 149-329 (501)
13 TIGR02518 EutH_ACDH acetaldehy 100.0 5.3E-45 1.2E-49 329.6 21.2 173 9-184 93-270 (488)
14 cd07148 ALDH_RL0313 Uncharacte 100.0 5.1E-45 1.1E-49 327.2 20.5 173 11-188 115-292 (455)
15 TIGR02288 PaaN_2 phenylacetic 100.0 4.8E-45 1E-49 333.1 20.3 172 16-188 189-375 (551)
16 PRK10090 aldehyde dehydrogenas 100.0 5.7E-45 1.2E-49 323.2 19.7 173 11-188 62-241 (409)
17 cd07122 ALDH_F20_ACDH Coenzyme 100.0 1.1E-44 2.4E-49 323.6 21.3 173 11-186 86-263 (436)
18 cd07113 ALDH_PADH_NahF Escheri 100.0 6.3E-45 1.4E-49 328.3 19.8 171 12-188 134-311 (477)
19 cd07142 ALDH_F2BC Arabidosis a 100.0 8.2E-45 1.8E-49 327.5 20.1 172 12-188 133-312 (476)
20 PLN02419 methylmalonate-semial 100.0 1E-44 2.2E-49 333.5 20.6 172 11-188 240-417 (604)
21 PRK13252 betaine aldehyde dehy 100.0 1E-44 2.2E-49 327.8 19.9 173 11-188 133-311 (488)
22 PRK09406 gabD1 succinic semial 100.0 1.2E-44 2.6E-49 325.1 20.1 172 12-189 115-293 (457)
23 PRK13968 putative succinate se 100.0 1.3E-44 2.9E-49 325.2 20.0 171 12-188 118-295 (462)
24 TIGR03216 OH_muco_semi_DH 2-hy 100.0 1.5E-44 3.3E-49 326.0 20.4 173 12-189 131-311 (481)
25 cd07090 ALDH_F9_TMBADH NAD+-de 100.0 1.8E-44 4E-49 323.5 20.1 174 10-188 106-285 (457)
26 cd07110 ALDH_F10_BADH Arabidop 100.0 2.1E-44 4.5E-49 323.1 20.3 173 11-188 111-290 (456)
27 cd07109 ALDH_AAS00426 Uncharac 100.0 2.6E-44 5.6E-49 322.3 20.7 175 10-189 107-288 (454)
28 TIGR01780 SSADH succinate-semi 100.0 1.7E-44 3.6E-49 323.3 19.0 173 11-188 108-288 (448)
29 PRK09457 astD succinylglutamic 100.0 4E-44 8.7E-49 323.9 21.6 171 13-188 127-305 (487)
30 cd07097 ALDH_KGSADH-YcbD Bacil 100.0 3E-44 6.6E-49 323.5 20.5 174 11-189 126-306 (473)
31 TIGR02299 HpaE 5-carboxymethyl 100.0 2.5E-44 5.4E-49 325.1 19.9 173 12-189 127-306 (488)
32 PLN02466 aldehyde dehydrogenas 100.0 2.3E-44 4.9E-49 328.8 19.5 172 12-188 187-366 (538)
33 cd07140 ALDH_F1L_FTFDH 10-form 100.0 2.8E-44 6E-49 324.9 19.6 171 13-188 140-318 (486)
34 PLN02467 betaine aldehyde dehy 100.0 2.9E-44 6.3E-49 326.0 19.7 173 11-188 142-321 (503)
35 TIGR03374 ABALDH 1-pyrroline d 100.0 2.6E-44 5.7E-49 324.0 19.3 172 11-188 128-306 (472)
36 cd07098 ALDH_F15-22 Aldehyde d 100.0 4.3E-44 9.3E-49 321.7 20.6 174 14-188 114-293 (465)
37 cd07144 ALDH_ALD2-YMR170C Sacc 100.0 4.2E-44 9E-49 323.4 20.4 172 11-187 135-313 (484)
38 PLN02174 aldehyde dehydrogenas 100.0 3.9E-44 8.4E-49 323.4 20.1 168 13-188 105-280 (484)
39 cd07119 ALDH_BADH-GbsA Bacillu 100.0 4.6E-44 9.9E-49 322.9 20.3 174 10-188 124-304 (482)
40 TIGR03250 PhnAcAld_DH putative 100.0 5.2E-44 1.1E-48 322.1 20.4 172 12-188 130-307 (472)
41 cd07091 ALDH_F1-2_Ald2-like AL 100.0 5.4E-44 1.2E-48 322.0 20.2 174 10-188 131-312 (476)
42 PLN02278 succinic semialdehyde 100.0 6.4E-44 1.4E-48 323.4 20.8 171 13-188 153-330 (498)
43 cd07085 ALDH_F6_MMSDH Methylma 100.0 5.6E-44 1.2E-48 322.1 20.2 174 11-189 127-306 (478)
44 cd07138 ALDH_CddD_SSP0762 Rhod 100.0 5.9E-44 1.3E-48 321.0 20.3 170 14-188 124-300 (466)
45 cd07100 ALDH_SSADH1_GabD1 Myco 100.0 7.7E-44 1.7E-48 317.4 20.8 171 12-188 88-265 (429)
46 cd07147 ALDH_F21_RNP123 Aldehy 100.0 6.3E-44 1.4E-48 319.5 20.0 173 11-188 114-290 (452)
47 cd07143 ALDH_AldA_AN0554 Asper 100.0 7.5E-44 1.6E-48 321.7 20.6 173 11-188 135-315 (481)
48 cd07151 ALDH_HBenzADH NADP+-de 100.0 7.3E-44 1.6E-48 320.4 20.4 173 11-188 121-301 (465)
49 cd07145 ALDH_LactADH_F420-Bios 100.0 6.5E-44 1.4E-48 319.8 19.7 172 12-188 115-293 (456)
50 cd07141 ALDH_F1AB_F2_RALDH1 NA 100.0 6.8E-44 1.5E-48 321.8 19.6 173 11-188 136-316 (481)
51 cd07115 ALDH_HMSADH_HapE Pseud 100.0 7.2E-44 1.6E-48 319.3 19.3 174 10-188 107-287 (453)
52 cd07131 ALDH_AldH-CAJ73105 Unc 100.0 1.1E-43 2.4E-48 320.0 20.7 171 13-188 128-305 (478)
53 cd07152 ALDH_BenzADH NAD-depen 100.0 1.1E-43 2.3E-48 317.5 20.3 174 10-188 100-280 (443)
54 cd07118 ALDH_SNDH Gluconobacte 100.0 8.8E-44 1.9E-48 319.1 19.7 173 11-188 110-289 (454)
55 TIGR01804 BADH glycine betaine 100.0 7.9E-44 1.7E-48 320.2 19.1 171 13-188 126-303 (467)
56 cd07127 ALDH_PAD-PaaZ Phenylac 100.0 1.7E-43 3.7E-48 323.1 21.3 172 16-188 189-375 (549)
57 TIGR03240 arg_catab_astD succi 100.0 2.1E-43 4.5E-48 319.0 21.3 171 13-188 125-303 (484)
58 cd07105 ALDH_SaliADH Salicylal 100.0 1.9E-43 4.1E-48 315.0 20.3 173 11-188 89-271 (432)
59 cd07095 ALDH_SGSD_AstD N-succi 100.0 1.7E-43 3.7E-48 315.6 19.9 174 11-189 88-269 (431)
60 PLN00412 NADP-dependent glycer 100.0 1.9E-43 4.1E-48 320.2 20.4 171 13-189 151-326 (496)
61 cd07139 ALDH_AldA-Rv0768 Mycob 100.0 1.9E-43 4.1E-48 318.0 20.2 173 11-188 128-306 (471)
62 PRK13473 gamma-aminobutyraldeh 100.0 1.9E-43 4.2E-48 318.3 20.2 170 13-188 131-307 (475)
63 cd07150 ALDH_VaniDH_like Pseud 100.0 1.9E-43 4.2E-48 316.1 19.8 174 10-188 109-289 (451)
64 PTZ00381 aldehyde dehydrogenas 100.0 1.7E-43 3.8E-48 320.2 19.7 168 13-188 102-276 (493)
65 cd07083 ALDH_P5CDH ALDH subfam 100.0 1.8E-43 4E-48 320.5 19.8 173 11-188 145-330 (500)
66 cd07089 ALDH_CddD-AldA-like Rh 100.0 2.1E-43 4.5E-48 317.1 19.9 174 11-189 114-294 (459)
67 KOG2450|consensus 100.0 3.2E-44 7E-49 317.4 14.3 174 9-187 147-328 (501)
68 cd07106 ALDH_AldA-AAD23400 Str 100.0 3.3E-43 7.1E-48 314.5 20.9 173 11-189 105-283 (446)
69 cd07120 ALDH_PsfA-ACA09737 Pse 100.0 2.4E-43 5.2E-48 316.5 20.0 174 11-188 108-288 (455)
70 cd07088 ALDH_LactADH-AldA Esch 100.0 2.6E-43 5.7E-48 316.7 20.2 173 11-188 124-303 (468)
71 cd07146 ALDH_PhpJ Streptomyces 100.0 3.9E-43 8.4E-48 314.8 20.8 174 11-189 111-289 (451)
72 cd07102 ALDH_EDX86601 Uncharac 100.0 2.9E-43 6.4E-48 315.1 20.0 174 10-188 106-285 (452)
73 TIGR01237 D1pyr5carbox2 delta- 100.0 2.8E-43 6.1E-48 320.0 20.1 173 11-188 158-343 (511)
74 cd07107 ALDH_PhdK-like Nocardi 100.0 3.6E-43 7.9E-48 315.1 20.4 172 11-188 107-286 (456)
75 cd07124 ALDH_PutA-P5CDH-RocA D 100.0 3.3E-43 7.2E-48 319.6 20.2 173 11-188 157-342 (512)
76 cd07117 ALDH_StaphAldA1 Unchar 100.0 4E-43 8.6E-48 316.6 20.5 170 13-188 129-305 (475)
77 cd07129 ALDH_KGSADH Alpha-Keto 100.0 3.7E-43 8.1E-48 315.2 20.2 175 13-188 98-287 (454)
78 cd07559 ALDH_ACDHII_AcoD-like 100.0 3.3E-43 7.1E-48 317.4 19.9 174 10-189 126-311 (480)
79 cd07123 ALDH_F4-17_P5CDH Delta 100.0 3E-43 6.5E-48 320.6 19.8 172 11-188 160-345 (522)
80 PRK03137 1-pyrroline-5-carboxy 100.0 3.3E-43 7.1E-48 319.8 19.8 173 11-188 162-347 (514)
81 cd07101 ALDH_SSADH2_GabD2 Myco 100.0 5E-43 1.1E-47 314.1 20.2 169 13-188 111-286 (454)
82 KOG2451|consensus 100.0 2.2E-43 4.7E-48 302.8 16.9 172 12-188 151-332 (503)
83 cd07092 ALDH_ABALDH-YdcW Esche 100.0 5.5E-43 1.2E-47 313.1 20.3 172 12-189 110-288 (450)
84 cd07094 ALDH_F21_LactADH-like 100.0 7.6E-43 1.7E-47 312.6 20.5 173 11-188 114-291 (453)
85 cd07114 ALDH_DhaS Uncharacteri 100.0 6.3E-43 1.4E-47 313.6 20.0 174 10-188 109-289 (457)
86 cd07125 ALDH_PutA-P5CDH Delta( 100.0 6.3E-43 1.4E-47 318.2 20.2 173 11-188 158-340 (518)
87 TIGR01236 D1pyr5carbox1 delta- 100.0 6.2E-43 1.3E-47 319.1 20.1 172 11-188 160-345 (533)
88 cd07111 ALDH_F16 Aldehyde dehy 100.0 5.4E-43 1.2E-47 316.1 19.1 169 16-189 143-317 (480)
89 cd07093 ALDH_F8_HMSADH Human a 100.0 7.5E-43 1.6E-47 312.7 19.8 174 10-188 107-287 (455)
90 cd07126 ALDH_F12_P5CDH Delta(1 100.0 9.5E-43 2.1E-47 314.8 20.6 171 11-188 133-310 (489)
91 cd07104 ALDH_BenzADH-like ALDH 100.0 1E-42 2.2E-47 309.6 20.4 174 10-188 88-269 (431)
92 PRK13805 bifunctional acetalde 100.0 1.1E-42 2.4E-47 332.4 20.9 171 11-184 99-274 (862)
93 cd07103 ALDH_F5_SSADH_GabD Mit 100.0 1.1E-42 2.4E-47 311.1 19.7 174 10-188 107-287 (451)
94 cd07112 ALDH_GABALDH-PuuC Esch 100.0 9.7E-43 2.1E-47 313.0 19.2 173 11-188 115-296 (462)
95 cd07108 ALDH_MGR_2402 Magnetos 100.0 1.6E-42 3.4E-47 311.0 20.4 173 10-188 107-287 (457)
96 cd07116 ALDH_ACDHII-AcoD Ralst 100.0 1.9E-42 4E-47 312.4 20.3 172 11-188 127-310 (479)
97 cd07099 ALDH_DDALDH Methylomon 100.0 2E-42 4.3E-47 309.8 20.0 172 11-188 110-287 (453)
98 TIGR01092 P5CS delta l-pyrroli 100.0 4.1E-42 8.8E-47 322.6 22.9 179 9-190 386-566 (715)
99 cd07136 ALDH_YwdH-P39616 Bacil 100.0 2E-42 4.4E-47 310.1 19.7 170 11-188 91-267 (449)
100 cd07133 ALDH_CALDH_CalB Conife 100.0 2.3E-42 5E-47 308.5 19.7 169 13-188 94-268 (434)
101 cd07149 ALDH_y4uC Uncharacteri 100.0 3.6E-42 7.8E-47 307.8 20.9 172 12-188 115-291 (453)
102 PRK09407 gabD2 succinic semial 100.0 3E-42 6.6E-47 314.1 20.5 170 12-188 146-322 (524)
103 PLN02418 delta-1-pyrroline-5-c 100.0 5.4E-42 1.2E-46 321.6 22.5 176 9-191 394-575 (718)
104 TIGR01722 MMSDH methylmalonic 100.0 4.1E-42 8.9E-47 310.0 20.7 172 11-188 127-304 (477)
105 TIGR01238 D1pyr5carbox3 delta- 100.0 2E-42 4.3E-47 313.8 18.6 169 16-189 156-334 (500)
106 cd07135 ALDH_F14-YMR110C Sacch 100.0 2.6E-42 5.7E-47 308.4 19.1 168 13-188 101-275 (436)
107 cd07077 ALDH-like NAD(P)+-depe 100.0 1.3E-41 2.9E-46 300.4 22.6 175 13-190 93-271 (397)
108 PF00171 Aldedh: Aldehyde dehy 100.0 2E-42 4.3E-47 310.7 17.0 175 9-188 115-296 (462)
109 PRK09847 gamma-glutamyl-gamma- 100.0 6.6E-42 1.4E-46 310.0 20.0 171 13-188 150-329 (494)
110 cd07137 ALDH_F3FHI Plant aldeh 100.0 9.6E-42 2.1E-46 304.5 19.9 169 13-188 94-269 (432)
111 PLN02203 aldehyde dehydrogenas 100.0 1.5E-41 3.2E-46 306.9 20.2 170 12-188 100-279 (484)
112 cd07132 ALDH_F3AB Aldehyde deh 100.0 1.4E-41 3.1E-46 304.2 19.5 168 13-188 93-267 (443)
113 cd07082 ALDH_F11_NP-GAPDH NADP 100.0 2.6E-41 5.5E-46 304.3 20.9 173 11-188 132-309 (473)
114 cd07084 ALDH_KGSADH-like ALDH 100.0 2.6E-41 5.6E-46 302.4 20.3 171 12-188 92-270 (442)
115 PRK11904 bifunctional proline 100.0 2.6E-41 5.7E-46 326.2 20.8 174 10-188 674-857 (1038)
116 KOG2456|consensus 100.0 1.7E-41 3.7E-46 292.7 16.1 168 14-188 98-271 (477)
117 cd07128 ALDH_MaoC-N N-terminal 100.0 4.2E-41 9.1E-46 305.8 19.2 168 14-188 137-319 (513)
118 TIGR02278 PaaN-DH phenylacetic 100.0 5.1E-41 1.1E-45 313.0 20.2 169 13-188 136-319 (663)
119 cd07087 ALDH_F3-13-14_CALDH-li 100.0 6E-41 1.3E-45 298.7 19.4 169 13-188 93-267 (426)
120 PRK11809 putA trifunctional tr 100.0 3.1E-41 6.8E-46 329.6 19.0 168 16-188 764-944 (1318)
121 cd07134 ALDH_AlkH-like Pseudom 100.0 7.4E-41 1.6E-45 298.7 19.8 171 11-188 91-267 (433)
122 PRK11563 bifunctional aldehyde 100.0 8.1E-41 1.8E-45 312.5 18.5 168 14-188 141-323 (675)
123 PRK11903 aldehyde dehydrogenas 100.0 3.1E-40 6.6E-45 300.7 19.0 167 14-188 141-323 (521)
124 PRK11905 bifunctional proline 100.0 3.6E-40 7.7E-45 321.7 20.0 168 16-188 672-849 (1208)
125 cd07078 ALDH NAD(P)+ dependent 100.0 1.9E-37 4.1E-42 275.4 20.6 175 10-189 86-267 (432)
126 cd06534 ALDH-SF NAD(P)+-depend 100.0 1.7E-36 3.6E-41 264.4 18.9 169 9-182 81-256 (367)
127 KOG2454|consensus 100.0 1.6E-36 3.4E-41 261.0 16.5 185 2-187 165-360 (583)
128 COG0014 ProA Gamma-glutamyl ph 100.0 4.2E-35 9E-40 253.7 14.9 188 2-191 96-286 (417)
129 COG4230 Delta 1-pyrroline-5-ca 100.0 6.1E-34 1.3E-38 253.7 10.8 168 16-188 232-409 (769)
130 cd07080 ALDH_Acyl-CoA-Red_LuxC 100.0 2.9E-31 6.3E-36 236.5 17.3 173 13-188 105-290 (422)
131 KOG2455|consensus 100.0 5.1E-30 1.1E-34 223.3 10.5 173 10-188 186-372 (561)
132 KOG2453|consensus 100.0 1.1E-30 2.3E-35 221.8 4.2 178 10-188 143-326 (507)
133 KOG4165|consensus 100.0 8.9E-28 1.9E-32 203.4 14.2 190 1-191 92-282 (433)
134 KOG2452|consensus 99.9 3.9E-26 8.5E-31 201.1 12.4 156 10-190 553-715 (881)
135 PF05893 LuxC: Acyl-CoA reduct 99.5 1.1E-12 2.4E-17 116.5 16.4 172 14-188 81-261 (399)
136 PRK11905 bifunctional proline 98.2 9.8E-06 2.1E-10 80.9 9.6 104 7-129 1065-1175(1208)
137 PF07368 DUF1487: Protein of u 96.1 0.0059 1.3E-07 50.1 3.5 54 132-187 6-59 (215)
138 PRK11809 putA trifunctional tr 88.6 1.3 2.8E-05 45.5 6.9 95 8-119 1175-1270(1318)
139 PF00815 Histidinol_dh: Histid 77.8 54 0.0012 29.7 14.6 165 9-187 95-271 (412)
140 PRK13769 histidinol dehydrogen 74.0 65 0.0014 28.7 12.5 161 9-187 82-247 (368)
141 PLN00125 Succinyl-CoA ligase [ 68.9 76 0.0017 27.4 11.1 128 45-190 150-299 (300)
142 PF04937 DUF659: Protein of un 66.2 5.2 0.00011 31.0 2.4 53 56-110 70-126 (153)
143 PF01513 NAD_kinase: ATP-NAD k 64.1 34 0.00074 28.9 7.3 58 97-154 74-134 (285)
144 PF08002 DUF1697: Protein of u 58.6 15 0.00033 27.8 3.8 50 43-98 40-90 (137)
145 PTZ00129 40S ribosomal protein 54.9 92 0.002 24.2 7.5 60 16-80 23-93 (149)
146 TIGR02667 moaB_proteo molybden 54.3 19 0.00041 28.0 3.7 42 71-112 30-76 (163)
147 COG0521 MoaB Molybdopterin bio 54.2 35 0.00077 27.0 5.2 45 64-110 28-78 (169)
148 COG0141 HisD Histidinol dehydr 52.1 1.9E+02 0.0041 26.4 12.4 163 8-187 104-280 (425)
149 PF11009 DUF2847: Protein of u 51.7 55 0.0012 23.9 5.5 41 45-86 19-62 (105)
150 PF00532 Peripla_BP_1: Peripla 46.4 1.6E+02 0.0036 24.4 8.5 64 49-114 123-194 (279)
151 PRK14046 malate--CoA ligase su 41.6 2.5E+02 0.0054 25.1 9.3 17 136-152 368-384 (392)
152 KOG4764|consensus 40.5 23 0.0005 23.8 1.9 21 170-191 48-68 (70)
153 KOG3239|consensus 39.2 58 0.0013 26.1 4.3 48 139-188 126-177 (193)
154 COG3581 Uncharacterized protei 37.2 88 0.0019 28.3 5.5 54 31-84 50-111 (420)
155 COG0683 LivK ABC-type branched 36.7 2.4E+02 0.0051 24.4 8.3 143 21-191 77-229 (366)
156 PRK09607 rps11p 30S ribosomal 36.5 71 0.0015 24.3 4.3 63 18-80 6-74 (132)
157 PRK00877 hisD bifunctional his 35.8 3.4E+02 0.0075 24.7 13.5 164 9-186 109-283 (425)
158 cd00886 MogA_MoaB MogA_MoaB fa 34.3 27 0.0006 26.6 1.8 43 71-113 28-75 (152)
159 PF04748 Polysacc_deac_2: Dive 34.2 2.5E+02 0.0055 22.7 8.6 160 18-190 18-203 (213)
160 PRK13770 histidinol dehydrogen 33.5 3.7E+02 0.0081 24.4 15.0 139 6-154 96-248 (416)
161 PRK05928 hemD uroporphyrinogen 33.4 2.4E+02 0.0053 22.3 12.5 124 47-190 3-149 (249)
162 PF13344 Hydrolase_6: Haloacid 31.9 82 0.0018 22.2 3.8 44 73-116 52-96 (101)
163 COG2204 AtoC Response regulato 31.0 4.3E+02 0.0093 24.4 11.8 80 65-156 17-102 (464)
164 PF14097 SpoVAE: Stage V sporu 30.3 62 0.0013 25.8 3.1 45 57-105 36-88 (180)
165 TIGR00177 molyb_syn molybdenum 30.2 45 0.00097 25.1 2.3 44 70-113 34-80 (144)
166 COG1058 CinA Predicted nucleot 29.5 1.1E+02 0.0023 25.9 4.7 38 72-109 30-70 (255)
167 PLN02926 histidinol dehydrogen 29.2 4.5E+02 0.0097 24.1 13.8 162 9-186 109-287 (431)
168 PF00994 MoCF_biosynth: Probab 28.9 61 0.0013 24.1 2.9 41 70-110 24-67 (144)
169 TIGR00069 hisD histidinol dehy 28.1 4.5E+02 0.0098 23.7 14.7 138 9-154 77-227 (393)
170 PRK12447 histidinol dehydrogen 27.7 4.8E+02 0.01 23.9 14.3 139 9-154 104-253 (426)
171 cd00532 MGS-like MGS-like doma 27.0 1.4E+02 0.0031 21.3 4.5 72 22-108 1-77 (112)
172 PF02887 PK_C: Pyruvate kinase 26.3 2.5E+02 0.0053 20.1 9.2 64 79-152 18-83 (117)
173 COG1540 Uncharacterized protei 26.3 57 0.0012 27.4 2.4 60 132-191 184-247 (252)
174 COG1206 Gid NAD(FAD)-utilizing 25.7 5E+02 0.011 23.4 8.6 111 62-183 74-209 (439)
175 cd00885 cinA Competence-damage 25.7 1.6E+02 0.0034 23.0 4.8 39 72-110 28-69 (170)
176 PLN02958 diacylglycerol kinase 24.9 4.8E+02 0.01 23.9 8.5 106 48-154 115-239 (481)
177 PRK05473 hypothetical protein; 24.9 1.6E+02 0.0035 20.7 4.1 33 46-78 5-38 (86)
178 cd06289 PBP1_MalI_like Ligand- 24.7 3.5E+02 0.0075 21.2 8.4 63 46-109 118-188 (268)
179 PRK13883 conjugal transfer pro 23.0 1.1E+02 0.0025 23.7 3.4 27 163-190 52-78 (151)
180 cd05569 PTS_IIB_fructose PTS_I 22.9 2.2E+02 0.0047 19.9 4.6 57 52-111 5-65 (96)
181 cd00758 MoCF_BD MoCF_BD: molyb 22.8 84 0.0018 23.2 2.6 41 72-112 28-71 (133)
182 cd06572 Histidinol_dh Histidin 22.8 5.7E+02 0.012 23.1 15.9 164 9-186 81-256 (390)
183 COG1879 RbsB ABC-type sugar tr 22.2 3.2E+02 0.0068 22.8 6.4 65 46-111 159-231 (322)
184 cd06307 PBP1_uncharacterized_s 22.0 4.1E+02 0.0089 21.1 7.0 63 47-110 127-197 (275)
185 COG1830 FbaB DhnA-type fructos 21.9 5E+02 0.011 22.1 10.9 119 42-171 111-244 (265)
186 smart00852 MoCF_biosynth Proba 21.5 1E+02 0.0023 22.6 2.9 42 72-113 27-71 (135)
187 PF07722 Peptidase_C26: Peptid 21.4 89 0.0019 25.3 2.7 20 87-109 49-68 (217)
188 PF02142 MGS: MGS-like domain 21.4 1E+02 0.0022 21.3 2.7 36 74-110 28-71 (95)
189 PRK00941 acetyl-CoA decarbonyl 21.4 4.5E+02 0.0097 26.0 7.7 129 59-190 200-359 (781)
190 PRK05752 uroporphyrinogen-III 21.1 4.3E+02 0.0094 21.5 6.8 127 48-190 6-154 (255)
191 TIGR01019 sucCoAalpha succinyl 20.8 4.8E+02 0.01 22.3 7.1 44 90-133 189-237 (286)
192 TIGR03628 arch_S11P archaeal r 20.8 2E+02 0.0043 21.3 4.1 60 21-80 2-67 (114)
193 PRK03604 moaC bifunctional mol 20.6 1.1E+02 0.0024 26.5 3.3 42 72-113 184-229 (312)
194 cd06273 PBP1_GntR_like_1 This 20.3 4.3E+02 0.0094 20.8 7.5 66 44-109 115-188 (268)
195 cd01424 MGS_CPS_II Methylglyox 20.2 1.7E+02 0.0037 20.6 3.7 52 74-126 41-100 (110)
196 cd01422 MGS Methylglyoxal synt 20.1 2.4E+02 0.0053 20.4 4.6 72 42-127 23-107 (115)
No 1
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=100.00 E-value=1.3e-47 Score=339.73 Aligned_cols=177 Identities=44% Similarity=0.817 Sum_probs=166.2
Q ss_pred CeeeEEEeecceeEEEEeCCCCchhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c-
Q psy18173 11 GLSLSQVTVPIGVLLVIFESRPDSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R- 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~- 87 (191)
+...+.+++|+|||++|+||+|.++++++++||++||+||+|||+++|+++..++++++++|.++|+| |++|++++ .
T Consensus 100 ~~~~~~~~~PlGVV~~I~p~~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l~~aG~P~gvv~~v~g~~~ 179 (406)
T cd07079 100 GLQIEKVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEALEEAGLPEDAVQLIPDTDR 179 (406)
T ss_pred ccceeEEecceEEEEEecCCCcchHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHHHHcCCCcccEEEecCCCh
Confidence 44567889999999999999887777899999999999999999999999999999999999999999 99999995 3
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceE
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETL 166 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v 166 (191)
+..+++|..||++|+|+||||+++|++|++.+ .+|+++|+|||||+||++|||+|+|++.+++|+| |+| .|++++|+
T Consensus 180 ~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a-~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv 257 (406)
T cd07079 180 EAVQELLKLDDYIDLIIPRGGAGLIRFVVENA-TIPVIKHGDGNCHVYVDESADLEMAVRIVVNAKTQRPS-VCNALETL 257 (406)
T ss_pred HHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc-CCCEEeecCCcceEEEeCCCCHHHHHHHHHHcccCCCc-ccccceeE
Confidence 46788888899999999999999999999877 7999999999999999999999999999999999 999 99999999
Q ss_pred EEecCcCCcchHHHHHHHHHhcCC
Q psy18173 167 LIHEDHFQGSFFTDVCKMFRDEGV 190 (191)
Q Consensus 167 ~V~~~i~~~~f~~~l~~~~~~~g~ 190 (191)
|||+++|| +|+++|+++++++|.
T Consensus 258 ~V~~si~d-~f~~~l~~~~~~~ga 280 (406)
T cd07079 258 LVHRDIAE-EFLPKLAEALREAGV 280 (406)
T ss_pred EEeHHHHH-HHHHHHHHHHHHCCC
Confidence 99999999 999999999998875
No 2
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=100.00 E-value=2.6e-47 Score=337.05 Aligned_cols=179 Identities=47% Similarity=0.825 Sum_probs=166.3
Q ss_pred CCeeeEEEeecceeEEEEeCCCCchhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 10 DGLSLSQVTVPIGVLLVIFESRPDSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
+|...+++++|+|||++|+||+|+++.+++++||++||+||+|||+.+|+++..++++++++|.++|+| |++|++++ .
T Consensus 93 ~~~~~~~~~~PlGVV~~I~pw~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGlP~gvv~~v~g~~ 172 (398)
T TIGR00407 93 SGLTLERVRVPLGVLGVIYEARPNVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGLPVGAVQLIETPS 172 (398)
T ss_pred CCceEEEEEeCcEEEEEEeCCCchHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCCChhHEEEecCCC
Confidence 466778899999999999999887777899999999999999999999999999999999999999999 99999995 3
Q ss_pred -hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhcCCCCccccCceE
Q psy18173 88 -EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKCDYPAACNAMETL 166 (191)
Q Consensus 88 -~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~~~GQ~C~s~~~v 166 (191)
++++++|..||+||+|+||||+++++.+++.. .+|+++|+|||||+||++|||+|+|++.+++|+|++||.|++++|+
T Consensus 173 ~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~-~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~~GQ~C~a~~rv 251 (398)
T TIGR00407 173 RELVSELLDLDEYIDLLIPRGGNGLVRLIKQTS-TIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQRPSTCNAIETL 251 (398)
T ss_pred HHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhC-CCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcCCCCcccccceE
Confidence 45788888899999999999999999998764 5899999999999999999999999999999999669999999999
Q ss_pred EEecCcCCcchHHHHHHHHHhcCC
Q psy18173 167 LIHEDHFQGSFFTDVCKMFRDEGV 190 (191)
Q Consensus 167 ~V~~~i~~~~f~~~l~~~~~~~g~ 190 (191)
|||+++|| +|+++|++++++.++
T Consensus 252 ~V~~~v~d-~f~~~l~~~~~~~~~ 274 (398)
T TIGR00407 252 LVNKAIAR-EFLPVLENQLLEKGV 274 (398)
T ss_pred EEeHHHHH-HHHHHHHHHHHhcCC
Confidence 99999999 999999999987653
No 3
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=100.00 E-value=1.7e-46 Score=333.75 Aligned_cols=177 Identities=44% Similarity=0.810 Sum_probs=165.5
Q ss_pred CeeeEEEeecceeEEEEeCCCCchhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c-
Q psy18173 11 GLSLSQVTVPIGVLLVIFESRPDSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R- 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~- 87 (191)
+...+.+++|+|||++|+||.|.++.+++++||++||+||+|||+.+|+++.++++++.++|.++|+| |++|++++ .
T Consensus 106 ~~~~~~~~~PlGVv~~I~p~p~~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~~~~l~~aGlP~gv~~~v~g~~~ 185 (417)
T PRK00197 106 GLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQEALEEAGLPADAVQLVETTDR 185 (417)
T ss_pred CceEEEEecCceEEEEEcCCCchHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHHHHHHHHcCcChhhEEEecCCCh
Confidence 44567889999999999999777777899999999999999999999999999999999999999999 99999984 3
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceE
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETL 166 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v 166 (191)
+..++++..||++|+|+||||+++|+++++.+ .+|+++|+|||||+||++|||+|+|++.+++|+| |+| .|++++|+
T Consensus 186 ~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a-~~~~~lELGGk~p~IV~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv 263 (417)
T PRK00197 186 AAVGELLKLDGYVDVIIPRGGAGLIRRVVENA-TVPVIEHGDGICHIYVDESADLDKALKIVLNAKTQRPS-VCNALETL 263 (417)
T ss_pred HHHHHHhccCCCccEEEecCCHHHHHHHHHhc-CCCEEeecCCcceEEEeCCCCHHHHHHHHHHhccCCCc-ccccceEE
Confidence 55788888899999999999999999998876 6999999999999999999999999999999999 999 99999999
Q ss_pred EEecCcCCcchHHHHHHHHHhcCC
Q psy18173 167 LIHEDHFQGSFFTDVCKMFRDEGV 190 (191)
Q Consensus 167 ~V~~~i~~~~f~~~l~~~~~~~g~ 190 (191)
|||+++|| +|+++|++++++.|+
T Consensus 264 ~V~~~i~d-~f~~~l~~~~~~~~~ 286 (417)
T PRK00197 264 LVHEAIAE-EFLPKLAEALAEAGV 286 (417)
T ss_pred EEEHHHhH-HHHHHHHHHHHHCCC
Confidence 99999999 999999999998864
No 4
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=100.00 E-value=1.4e-46 Score=338.15 Aligned_cols=168 Identities=20% Similarity=0.254 Sum_probs=155.2
Q ss_pred eEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-chH
Q psy18173 14 LSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-REE 89 (191)
Q Consensus 14 ~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~~ 89 (191)
.+..++|+|||++|+|| ||..++ +++++||++||+||+|||+.+|.++..++++++++|.++|+| |++|++++ ..+
T Consensus 123 ~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~eaGlP~gvv~vv~g~~~~ 202 (465)
T PRK15398 123 TLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIE 202 (465)
T ss_pred eEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHHcCCCCCeEEEecCCCHH
Confidence 46678999999999999 996555 689999999999999999999999999999999999999999 99999986 444
Q ss_pred HHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceEEE
Q psy18173 90 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETLLI 168 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v~V 168 (191)
..+.|..||+||+|+||||+++|+.+++ ..+|+++|+|||||+||++|||+|+|++.+++|+| |+||.|++++|+||
T Consensus 203 ~~~~L~~~~~vd~I~fTGS~~~G~~v~~--~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A~~rvlV 280 (465)
T PRK15398 203 TAQRLMKHPGIALLVVTGGPAVVKAAMK--SGKKAIGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIAEKEVIV 280 (465)
T ss_pred HHHHHHcCCCccEEEeeCCHHHHHHHHH--cCCceeeecCCCceEEEecCCCHHHHHHHHHHhcccCCCCcCCCCceEEE
Confidence 5565566999999999999999999988 36999999999999999999999999999999999 99999999999999
Q ss_pred ecCcCCcchHHHHHHH
Q psy18173 169 HEDHFQGSFFTDVCKM 184 (191)
Q Consensus 169 ~~~i~~~~f~~~l~~~ 184 (191)
|++||| +|+++|+++
T Consensus 281 ~~si~d-~f~~~l~~~ 295 (465)
T PRK15398 281 VDSVAD-ELMRLMEKN 295 (465)
T ss_pred eHHHHH-HHHHHHHHc
Confidence 999999 999999873
No 5
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=100.00 E-value=1.2e-46 Score=335.65 Aligned_cols=168 Identities=20% Similarity=0.257 Sum_probs=155.3
Q ss_pred eEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-chH
Q psy18173 14 LSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-REE 89 (191)
Q Consensus 14 ~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~~ 89 (191)
.+.+|+|+|||++|+|| ||..++ +++++||++||+||+|||+++|+++.+++++++++|.++|+| |++|++++ ..+
T Consensus 91 ~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGlP~gvv~~v~g~~~~ 170 (429)
T cd07121 91 TLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIE 170 (429)
T ss_pred eEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCCCcceEEEecCCChH
Confidence 45678999999999999 996665 689999999999999999999999999999999999999999 99999996 444
Q ss_pred HHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceEEE
Q psy18173 90 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETLLI 168 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v~V 168 (191)
..+.|..||+||+|+||||+++|+.+++. .+|+++|+|||||+||++|||+|+|++.+++|+| |+||.|++++|+||
T Consensus 171 ~~~~L~~~~~v~~I~fTGs~~~g~~v~~~--~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a~~rv~V 248 (429)
T cd07121 171 TTNELMAHPDINLLVVTGGPAVVKAALSS--GKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIA 248 (429)
T ss_pred HHHHHHcCCCccEEEeeCCHHHHHHHHhC--CCceEeecCCCceEEEecCCCHHHHHHHHHhcccccCCCCCCccceEEE
Confidence 55555569999999999999999999876 4999999999999999999999999999999999 99999999999999
Q ss_pred ecCcCCcchHHHHHHH
Q psy18173 169 HEDHFQGSFFTDVCKM 184 (191)
Q Consensus 169 ~~~i~~~~f~~~l~~~ 184 (191)
|+++|| +|+++|+++
T Consensus 249 ~~~i~d-~f~~~L~~~ 263 (429)
T cd07121 249 VDSVAD-YLIAAMQRN 263 (429)
T ss_pred eHHHHH-HHHHHHHHC
Confidence 999999 999998775
No 6
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=2.6e-46 Score=336.83 Aligned_cols=171 Identities=25% Similarity=0.297 Sum_probs=157.7
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+.+++|+|||++|+|| ||.++ .+++++||++||+||+|||+.+|+++..+++++. ++|+| |++|++++
T Consensus 124 ~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~----~aglP~Gv~nvv~g~ 199 (472)
T COG1012 124 GSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAA----EAGLPAGVLNVVTGG 199 (472)
T ss_pred CcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHH----HhCCCCCeEEEEeCC
Confidence 45678899999999999999 99655 4799999999999999999999999999998876 68899 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhc--CCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS--QHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~--~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
+.+.++.|..||+|++|.||||+++|+.+++.+ ..+|+++|+|||||+||++|||+|.|++.+++|+| |+||.|++.
T Consensus 200 ~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~ 279 (472)
T COG1012 200 GAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAA 279 (472)
T ss_pred CchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCC
Confidence 444667777799999999999999999999888 47999999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHh
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRD 187 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~ 187 (191)
+|+|||+++|| +|+++|.++ ++
T Consensus 280 ~R~~V~~~v~d-~f~~~l~~~-~~ 301 (472)
T COG1012 280 SRLIVHESVYD-EFVERLVAR-AA 301 (472)
T ss_pred eEEEEehhhHH-HHHHHHHHH-Hh
Confidence 99999999999 999999988 55
No 7
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=100.00 E-value=3.8e-46 Score=336.04 Aligned_cols=175 Identities=21% Similarity=0.252 Sum_probs=161.6
Q ss_pred eeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCchH
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTREE 89 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~~~ 89 (191)
..+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..+++++.++|.++|+| |++|++++..+
T Consensus 125 ~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~ 204 (474)
T cd07130 125 RMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGAD 204 (474)
T ss_pred eEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChh
Confidence 456788999999999999 995554 689999999999999999999999999999999999999999 99999996444
Q ss_pred HHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceE
Q psy18173 90 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETL 166 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v 166 (191)
..+.|..||++|+|+||||+++|+.|++.++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|++++|+
T Consensus 205 ~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv 284 (474)
T cd07130 205 VGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRL 284 (474)
T ss_pred HHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEE
Confidence 5676777999999999999999999998764 6889999999999999999999999999999999 999999999999
Q ss_pred EEecCcCCcchHHHHHHHHHhc
Q psy18173 167 LIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 167 ~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|||+++|| +|+++|++++++.
T Consensus 285 ~V~~~i~d-~f~~~l~~~~~~l 305 (474)
T cd07130 285 IVHESIYD-EVLERLKKAYKQV 305 (474)
T ss_pred EEcHhHHH-HHHHHHHHHHhcC
Confidence 99999999 9999999998764
No 8
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=100.00 E-value=5.9e-46 Score=337.33 Aligned_cols=175 Identities=22% Similarity=0.269 Sum_probs=162.3
Q ss_pred eeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCchH
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTREE 89 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~~~ 89 (191)
..+..++|+|||++|+|| ||..+ .+++++||++||+||+|||+.+|+++..+.+++.+++.++|+| |++|++++..+
T Consensus 147 ~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~ 226 (508)
T PLN02315 147 MMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAE 226 (508)
T ss_pred eeEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChH
Confidence 345689999999999999 99544 5799999999999999999999999999999999999999999 99999997555
Q ss_pred HHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceE
Q psy18173 90 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETL 166 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v 166 (191)
..+.+..||++|+|.||||+++|+.+++.++ .+|+++|+|||||+||++|||+|+|++.+++++| ++||.|++++|+
T Consensus 227 ~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv 306 (508)
T PLN02315 227 IGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRL 306 (508)
T ss_pred HHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEE
Confidence 6777777999999999999999999998654 5899999999999999999999999999999999 999999999999
Q ss_pred EEecCcCCcchHHHHHHHHHhc
Q psy18173 167 LIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 167 ~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|||+++|| +|+++|++++++.
T Consensus 307 ~V~~~i~d-~f~~~l~~~~~~l 327 (508)
T PLN02315 307 LLHESIYD-DVLEQLLTVYKQV 327 (508)
T ss_pred EEeHHHHH-HHHHHHHHHHHhc
Confidence 99999999 9999999999876
No 9
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=100.00 E-value=7.6e-46 Score=334.35 Aligned_cols=175 Identities=22% Similarity=0.306 Sum_probs=163.0
Q ss_pred eeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCchH
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTREE 89 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~~~ 89 (191)
..+.+++|+|||++|+|| ||..+ .+++++||++||+||+|||+.+|.++..++++++++|+++|+| |++|++++...
T Consensus 126 ~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~ 205 (478)
T cd07086 126 RLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD 205 (478)
T ss_pred eEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch
Confidence 457789999999999999 99544 5799999999999999999999999999999999999999999 99999996433
Q ss_pred HHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceE
Q psy18173 90 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETL 166 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v 166 (191)
.+++|..||++|+|.||||+++|+.+++.++ .+|+++|+|||||+||++|||++.|++.+++|+| ++||.|++++|+
T Consensus 206 ~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv 285 (478)
T cd07086 206 GGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRL 285 (478)
T ss_pred hHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEE
Confidence 7788888999999999999999999988764 6899999999999999999999999999999999 999999999999
Q ss_pred EEecCcCCcchHHHHHHHHHhc
Q psy18173 167 LIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 167 ~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|||+++|| +|+++|++++++.
T Consensus 286 ~V~~~i~d-~f~~~l~~~~~~~ 306 (478)
T cd07086 286 IVHESVYD-EFLERLVKAYKQV 306 (478)
T ss_pred EEcHHHHH-HHHHHHHHHHHhC
Confidence 99999999 9999999999875
No 10
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=9.1e-46 Score=330.80 Aligned_cols=171 Identities=20% Similarity=0.293 Sum_probs=155.1
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
...+..++|+|||++|+|| ||.+++ +++++||++||+||+|||+++|+++..+++++++++.++|+| |++|++++ .
T Consensus 87 ~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~~ 166 (439)
T cd07081 87 GGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPS 166 (439)
T ss_pred CceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCCC
Confidence 3457889999999999999 996665 689999999999999999999999999999999999999999 99999996 5
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceE
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETL 166 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v 166 (191)
.+..+.|..||+|++|.||||+++++...+. .+|+++|+|||||+||++|||+|+|++.+++|+| ++||.|++.+|+
T Consensus 167 ~~~g~~L~~~~~V~~V~FTGs~~v~~~aa~~--~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv 244 (439)
T cd07081 167 IELAQRLMKFPGIGLLLATGGPAVVKAAYSS--GKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSV 244 (439)
T ss_pred HHHHHHHHcCCCCCEEEEECCHHHHHHHHhc--CCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhcCCCCCCCCCCEE
Confidence 5566666669999999999999976654332 6899999999999999999999999999999999 999999999999
Q ss_pred EEecCcCCcchHHHHHHHH
Q psy18173 167 LIHEDHFQGSFFTDVCKMF 185 (191)
Q Consensus 167 ~V~~~i~~~~f~~~l~~~~ 185 (191)
|||+++|| +|+++|+++.
T Consensus 245 ~V~~~i~d-~f~~~l~~~~ 262 (439)
T cd07081 245 IVVDSVYD-EVMRLFEGQG 262 (439)
T ss_pred EEcHHHHH-HHHHHHHHcC
Confidence 99999999 9999988753
No 11
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=100.00 E-value=1.6e-45 Score=332.68 Aligned_cols=172 Identities=21% Similarity=0.246 Sum_probs=157.5
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
...+.+|+|+|||++|+|| ||.++. +++++||++||+||+|||+.+|+++..+.+++. ++|+| |++|++++ .
T Consensus 138 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----~aglP~gvv~vv~g~~ 213 (482)
T PRK11241 138 KRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAI----RAGIPAGVFNVVTGSA 213 (482)
T ss_pred ceEEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHH----HcCCCcccEEEEecCC
Confidence 3456789999999999999 996665 789999999999999999999999999887765 79999 99999996 4
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
.+..+.|..||++|+|.||||+++|++|++.++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|++++
T Consensus 214 ~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ 293 (482)
T PRK11241 214 GAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCAN 293 (482)
T ss_pred chhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCe
Confidence 556666666999999999999999999998765 6899999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++|| +|+++|++++++.
T Consensus 294 ri~V~~~i~d-~f~~~l~~~~~~l 316 (482)
T PRK11241 294 RLYVQDGVYD-RFAEKLQQAVSKL 316 (482)
T ss_pred EEEEeHHHHH-HHHHHHHHHHhhC
Confidence 9999999999 9999999998875
No 12
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=100.00 E-value=3.5e-45 Score=331.81 Aligned_cols=173 Identities=20% Similarity=0.226 Sum_probs=158.2
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++.++++++. ++|+| |++|++++
T Consensus 149 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----~aGlP~gvv~~v~g~ 224 (501)
T PLN02766 149 QLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAK----LAGVPDGVINVVTGF 224 (501)
T ss_pred CceEEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHH----hcCCCcCcEEEEecC
Confidence 34456789999999999999 996665 789999999999999999999999999888765 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
..+..+.|..||++|+|.||||+.+|++|++.++ .+|+++|+|||||+||++|||+|.|++.+++++| ++||.|++
T Consensus 225 ~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a 304 (501)
T PLN02766 225 GPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVA 304 (501)
T ss_pred chHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCC
Confidence 5566777777999999999999999999998764 4899999999999999999999999999999999 99999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++|+|||+++|| +|+++|++++++.
T Consensus 305 ~~ri~V~~si~d-~f~~~l~~~~~~l 329 (501)
T PLN02766 305 SSRVYVQEGIYD-EFVKKLVEKAKDW 329 (501)
T ss_pred CeEEEEcHHHHH-HHHHHHHHHHHhc
Confidence 999999999999 9999999998765
No 13
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=100.00 E-value=5.3e-45 Score=329.61 Aligned_cols=173 Identities=20% Similarity=0.357 Sum_probs=157.2
Q ss_pred cCCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEec
Q psy18173 9 ADGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVS 85 (191)
Q Consensus 9 ~~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~ 85 (191)
+++...+++++|+|||++|+|| ||+.++ +++++||++||+||+|||+++|.++..++++++++|.++|+| |++|+++
T Consensus 93 ~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gvv~~v~ 172 (488)
T TIGR02518 93 DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCIT 172 (488)
T ss_pred CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCcccEEEEc
Confidence 4566678899999999999999 998887 579999999999999999999999999999999999999999 9999999
Q ss_pred C-chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 86 T-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 86 ~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
+ ..+..+.|..||+||+|+||||+++++.+.+ ..+|+++|+|||||+||++|||+|+|++.+++|+| ++||.|++.
T Consensus 173 g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a~~--~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~a~ 250 (488)
T TIGR02518 173 VPTIEGTNELMKNKDTSLILATGGEAMVKAAYS--SGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKTFDNGTICASE 250 (488)
T ss_pred CCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH--cCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence 5 4444454444899999999999999988733 36999999999999999999999999999999999 899999999
Q ss_pred ceEEEecCcCCcchHHHHHHH
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKM 184 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~ 184 (191)
+|+|||+++|| +|+++|+++
T Consensus 251 ~rllV~~~i~d-~f~~~L~~~ 270 (488)
T TIGR02518 251 QSIIVEECNKD-AVVEELKKQ 270 (488)
T ss_pred CEEEEeHHHHH-HHHHHHHHh
Confidence 99999999999 999999876
No 14
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=5.1e-45 Score=327.17 Aligned_cols=173 Identities=17% Similarity=0.198 Sum_probs=157.4
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...+..++|+|||++|+|| ||... .+++++||++||+||+|||+.+|.++..++++++ ++|+| |++|++++.
T Consensus 115 ~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~----~aGlP~gvv~~v~g~ 190 (455)
T cd07148 115 GRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLH----EAGLPEGWCQAVPCE 190 (455)
T ss_pred CceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHH----HcCCCcCcEEEEeCC
Confidence 34567889999999999999 99555 4789999999999999999999999999998886 69999 999999964
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC-CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ-HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
.+..+.|..||++|+|.||||+++|+.++++++ .+|+++|+|||||+||++|||+|+|++.+++|+| ++||.|++++|
T Consensus 191 ~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~r 270 (455)
T cd07148 191 NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQR 270 (455)
T ss_pred hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeE
Confidence 345666666999999999999999999988764 6899999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||+++|| +|+++|++++++.
T Consensus 271 v~V~~~i~d-~f~~~l~~~~~~~ 292 (455)
T cd07148 271 VFVPAEIAD-DFAQRLAAAAEKL 292 (455)
T ss_pred EEEcHhHHH-HHHHHHHHHHhcC
Confidence 999999999 9999999998876
No 15
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=100.00 E-value=4.8e-45 Score=333.09 Aligned_cols=172 Identities=20% Similarity=0.256 Sum_probs=160.1
Q ss_pred EEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC--chHH
Q psy18173 16 QVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST--REEI 90 (191)
Q Consensus 16 ~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~--~~~~ 90 (191)
..++|+|||++|+|| ||.+.. +++++||++||+||+|||+++|+++.++.+++.++|.++|+| |++|++++ +.++
T Consensus 189 ~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~ 268 (551)
T TIGR02288 189 FTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEA 268 (551)
T ss_pred EEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHH
Confidence 368999999999999 997775 689999999999999999999999998888888999999999 99999985 4556
Q ss_pred HHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceEEEe
Q psy18173 91 SDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETLLIH 169 (191)
Q Consensus 91 ~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v~V~ 169 (191)
.+.|..||+|++|.||||+++|++|++.++.+++++|+|||||+||++|||+|.|++.+++|+| ++||+|++++|+|||
T Consensus 269 ~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~ 348 (551)
T TIGR02288 269 AQRLATDPAVRIIDFTGSNAFGQWLEQNARQAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVP 348 (551)
T ss_pred HHHHHhCCCccEEEEECCHHHHHHHHHhcccCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEe
Confidence 6777779999999999999999999998878999999999999999999999999999999999 999999999999999
Q ss_pred cC---------cCCcchHHHHHHHHHhc
Q psy18173 170 ED---------HFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 170 ~~---------i~~~~f~~~l~~~~~~~ 188 (191)
++ +|| +|++.|++++++.
T Consensus 349 ~~~i~~~~g~~i~d-ef~~~L~~~~~~l 375 (551)
T TIGR02288 349 RDGIRTDQGRKSYD-EVAADLATAIDGL 375 (551)
T ss_pred ccccccccchhHHH-HHHHHHHHHHHHh
Confidence 99 799 9999999988765
No 16
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=100.00 E-value=5.7e-45 Score=323.23 Aligned_cols=173 Identities=20% Similarity=0.247 Sum_probs=158.9
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+.+++|+|||++|+|| ||.... +++++||++||+||+|||+.+|.+++.+++++. ++|+| |++|++++
T Consensus 62 ~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~ 137 (409)
T PRK10090 62 GENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVD----EIGLPKGVFNLVLGR 137 (409)
T ss_pred CceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH----HcCCCcccEEEEeCC
Confidence 34567789999999999999 995554 689999999999999999999999999988875 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
..+..+.|..||++|+|.||||+++|+.++++++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|+++
T Consensus 138 ~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~ 217 (409)
T PRK10090 138 GETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCA 217 (409)
T ss_pred ChhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCC
Confidence 5566777777999999999999999999988764 6899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+|||+++|| +|+++|++++++.
T Consensus 218 ~rv~V~~~i~~-~f~~~l~~~~~~~ 241 (409)
T PRK10090 218 ERVYVQKGIYD-QFVNRLGEAMQAV 241 (409)
T ss_pred eEEEEcHHHHH-HHHHHHHHHHHhc
Confidence 99999999999 9999999999875
No 17
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=1.1e-44 Score=323.55 Aligned_cols=173 Identities=21% Similarity=0.379 Sum_probs=156.8
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+++|+|+|||++|+|| ||.++. +++++||++||+||+|||+.+|+++..++++++++|.++|+| |++|++++
T Consensus 86 ~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g~ 165 (436)
T cd07122 86 EKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEEP 165 (436)
T ss_pred CCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecCC
Confidence 44567889999999999999 996666 689999999999999999999999999999999999999999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
..+..+.|..||+||+|.||||+++++...+ ..+|+++|+|||||+||++|||+|+|++.+++|+| ++||.|++++|
T Consensus 166 ~~~~~~~l~~~~~v~~v~ftGs~~v~~~a~~--~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~r 243 (436)
T cd07122 166 SIELTQELMKHPDVDLILATGGPGMVKAAYS--SGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQS 243 (436)
T ss_pred ChHHHHHHHcCCCcCEEEEcCCHHHHHHHHh--cCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCCCCCCCCE
Confidence 4455565666999999999999998876433 36999999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHH
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFR 186 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~ 186 (191)
+|||+++|| +|+++|+++..
T Consensus 244 v~V~~~i~d-~f~~~l~~~~~ 263 (436)
T cd07122 244 VIVDDEIYD-EVRAELKRRGA 263 (436)
T ss_pred EEEechhHH-HHHHHHHHhcc
Confidence 999999999 99999987653
No 18
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=100.00 E-value=6.3e-45 Score=328.29 Aligned_cols=171 Identities=16% Similarity=0.154 Sum_probs=156.7
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
...+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++ .
T Consensus 134 ~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~----~aglP~gvv~~v~g~~ 209 (477)
T cd07113 134 YTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAK----EAGIPDGVLNVVNGKG 209 (477)
T ss_pred ceEEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HcCcCCCcEEEEecCc
Confidence 3456789999999999999 995555 789999999999999999999999998888765 79999 99999996 4
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
. ..+.|..||++|+|.||||+++|+.+++.++ .+|+++|+|||||+||++|||+|.|++.+++|+| |+||.|++++
T Consensus 210 ~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~ 288 (477)
T cd07113 210 A-VGAQLISHPDVAKVSFTGSVATGKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPE 288 (477)
T ss_pred h-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCc
Confidence 5 6666667999999999999999999988764 6999999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++|| +|+++|++++++.
T Consensus 289 rv~V~~~i~d-~f~~~l~~~~~~~ 311 (477)
T cd07113 289 RFYVHRSKFD-ELVTKLKQALSSF 311 (477)
T ss_pred EEEECHHHHH-HHHHHHHHHHHhC
Confidence 9999999999 9999999998775
No 19
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=100.00 E-value=8.2e-45 Score=327.45 Aligned_cols=172 Identities=20% Similarity=0.224 Sum_probs=157.4
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
...+..++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|+++..+++++. ++|+| |++|++++ .
T Consensus 133 ~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~----~aGlP~gvv~~v~g~~ 208 (476)
T cd07142 133 HHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAA----EAGLPDGVLNIVTGFG 208 (476)
T ss_pred ceEEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHH----HcCcCcccEEEEeCCc
Confidence 3456789999999999999 996655 789999999999999999999999999888765 79999 99999996 5
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
.+.++.|..||++|+|+||||+++|+.|++.++ .+|+++|+|||||+||++|||+|+|++.+++|+| ++||.|+++
T Consensus 209 ~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~ 288 (476)
T cd07142 209 PTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAG 288 (476)
T ss_pred hhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence 557777788999999999999999999998764 4899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+|||+++|| +|+++|++++++.
T Consensus 289 ~rv~V~~~i~d-~f~~~l~~~~~~~ 312 (476)
T cd07142 289 SRTFVHESIYD-EFVEKAKARALKR 312 (476)
T ss_pred eeEEEeHHHHH-HHHHHHHHHHHhc
Confidence 99999999999 9999999988754
No 20
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=100.00 E-value=1e-44 Score=333.46 Aligned_cols=172 Identities=16% Similarity=0.213 Sum_probs=155.8
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...++.++|+|||++|+|| ||.... +++++||++||+||+|||+.+|+++..+++++. ++|+| |++|+++|.
T Consensus 240 ~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~----eAGlP~GvvnvV~G~ 315 (604)
T PLN02419 240 GVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAM----EAGLPDGVLNIVHGT 315 (604)
T ss_pred CccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHH----HhCcCcceEEEEeCC
Confidence 34456789999999999999 995555 799999999999999999999999999888775 79999 999999964
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
.+..+.|..|++|++|.||||+.+|+.|++.++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|++++
T Consensus 316 ~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~ 395 (604)
T PLN02419 316 NDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALS 395 (604)
T ss_pred hHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCC
Confidence 345555666999999999999999999998764 6999999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||++ +| +|+++|++++++.
T Consensus 396 Rv~V~~~-~d-~f~e~l~~~~~~l 417 (604)
T PLN02419 396 TVVFVGD-AK-SWEDKLVERAKAL 417 (604)
T ss_pred EEEEeCc-HH-HHHHHHHHHHHHh
Confidence 9999999 88 9999999998875
No 21
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=1e-44 Score=327.75 Aligned_cols=173 Identities=17% Similarity=0.166 Sum_probs=158.5
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...+.+++|+|||++|+|| ||..++ +++++||++||+||+|||+.+|.++..++++++ ++|+| |++|++++.
T Consensus 133 ~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~----~aglP~g~v~~v~g~ 208 (488)
T PRK13252 133 GSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYT----EAGLPDGVFNVVQGD 208 (488)
T ss_pred CceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHH----HcCcCcccEEEEecC
Confidence 44567889999999999999 995555 789999999999999999999999999998875 69999 999999963
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
....+.|..||++|+|+||||+++|+.++++++ .+|+++|+|||||+||++|||++.|++.+++++| ++||.|++++
T Consensus 209 ~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~ 288 (488)
T PRK13252 209 GRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGT 288 (488)
T ss_pred cHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCe
Confidence 336677777999999999999999999998775 6899999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++|| +|+++|++++++.
T Consensus 289 rv~V~~~i~d-~f~~~l~~~~~~~ 311 (488)
T PRK13252 289 RVFVQKSIKA-AFEARLLERVERI 311 (488)
T ss_pred EEEEcHHHHH-HHHHHHHHHHHhc
Confidence 9999999999 9999999998876
No 22
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=1.2e-44 Score=325.12 Aligned_cols=172 Identities=17% Similarity=0.184 Sum_probs=155.9
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEec-Cc
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVS-TR 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~-~~ 87 (191)
...+.+++|+|||++|+|| ||.+++ +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|+++ +.
T Consensus 115 ~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~----~aGlP~gvv~~v~~g~ 190 (457)
T PRK09406 115 SRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFR----RAGFPDGCFQTLLVGS 190 (457)
T ss_pred ceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHH----HhCCCcCcEEEEcCCc
Confidence 3456789999999999999 996666 689999999999999999999999998888765 79999 9999997 44
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
+....+ ..||++++|.||||+++|+.|++.++ .+|+++|+|||||+||++|||+|.|++.+++++| ++||.|++++
T Consensus 191 ~~~~~l-~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~ 269 (457)
T PRK09406 191 GAVEAI-LRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAK 269 (457)
T ss_pred hhHHHH-hcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCe
Confidence 444454 55999999999999999999988765 6899999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhcC
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~g 189 (191)
|+|||+++|| +|++.|++++++..
T Consensus 270 rv~V~~~i~d-~f~~~l~~~~~~l~ 293 (457)
T PRK09406 270 RFIVHADVYD-AFAEKFVARMAALR 293 (457)
T ss_pred EEEEcHHHHH-HHHHHHHHHHhhCC
Confidence 9999999999 99999999998763
No 23
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=100.00 E-value=1.3e-44 Score=325.16 Aligned_cols=171 Identities=19% Similarity=0.217 Sum_probs=155.2
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
...+..++|+|||++|+|| ||.+++ +++++||++||+||+|||+.+|.+++.+++++. ++|+| |++|++++ .
T Consensus 118 ~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~----~aGlP~gv~~~v~g~~ 193 (462)
T PRK13968 118 QQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFK----DAGIPQGVYGWLNADN 193 (462)
T ss_pred ceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH----HcCcCcCcEEEEecCc
Confidence 3456789999999999999 996555 689999999999999999999999988887765 79999 99999996 4
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
+....++ .||++|+|+||||+++|++|++.++ .+|+++|+|||||+||++|||++.|++.+++|+| ++||.|++++
T Consensus 194 ~~~~~l~-~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~ 272 (462)
T PRK13968 194 DGVSQMI-NDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAK 272 (462)
T ss_pred hhhHHHh-cCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCc
Confidence 4455544 5899999999999999999998774 7999999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++|| +|+++|++++++.
T Consensus 273 rv~V~~~i~~-~f~~~l~~~~~~~ 295 (462)
T PRK13968 273 RFIIEEGIAS-AFTERFVAAAAAL 295 (462)
T ss_pred EEEECHhHHH-HHHHHHHHHHhcC
Confidence 9999999999 9999999999876
No 24
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=100.00 E-value=1.5e-44 Score=326.05 Aligned_cols=173 Identities=21% Similarity=0.200 Sum_probs=158.8
Q ss_pred eeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
...+.+++|+|||++|+|| ||... .+++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++ .
T Consensus 131 ~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~----~aglP~g~~~~v~g~~ 206 (481)
T TIGR03216 131 ALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMN----AVGVPKGVYNVVHGFG 206 (481)
T ss_pred ceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHH----HcCCCcCceEEEecCC
Confidence 3456789999999999999 99544 5789999999999999999999999999988875 79999 99999986 3
Q ss_pred -hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 88 -EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 88 -~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
++.+++|..||++|+|+||||+.+|+.+++.++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|+++
T Consensus 207 ~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~ 286 (481)
T TIGR03216 207 PDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGT 286 (481)
T ss_pred hhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC
Confidence 457888888999999999999999999998774 6899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhcC
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~g 189 (191)
+|+|||+++|| +|++.|++++++..
T Consensus 287 ~rv~V~~~i~~-~f~~~l~~~~~~~~ 311 (481)
T TIGR03216 287 ERVYVERPIFD-RFVAALKARAESLK 311 (481)
T ss_pred eEEEEcHHHHH-HHHHHHHHHHHhcC
Confidence 99999999999 99999999998763
No 25
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=100.00 E-value=1.8e-44 Score=323.48 Aligned_cols=174 Identities=17% Similarity=0.151 Sum_probs=159.5
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.+...+.+++|+|||++|+|| ||..++ +++++||++||+||+|||+++|.++..+.+++. ++|+| |++|++++
T Consensus 106 ~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~----~aGlP~g~~~~v~g 181 (457)
T cd07090 106 GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILT----EAGLPDGVFNVVQG 181 (457)
T ss_pred CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHH----HcCCCcccEEEEeC
Confidence 355677889999999999999 996555 789999999999999999999999999998876 69999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
..+..+.|..||++++|+||||+++|++|+++++ .+|+++|+|||||+||++|||+|+|++.+++|+| ++||.|+++
T Consensus 182 ~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~ 261 (457)
T cd07090 182 GGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNG 261 (457)
T ss_pred ChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCC
Confidence 4446666777999999999999999999998775 5899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+|||+++|| +|++.|++++++.
T Consensus 262 ~rv~V~~~i~d-~f~~~l~~~~~~~ 285 (457)
T cd07090 262 TRVFVQRSIKD-EFTERLVERTKKI 285 (457)
T ss_pred eEEEEcHHHHH-HHHHHHHHHHHhc
Confidence 99999999999 9999999999876
No 26
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=100.00 E-value=2.1e-44 Score=323.05 Aligned_cols=173 Identities=23% Similarity=0.239 Sum_probs=159.2
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++
T Consensus 111 ~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~----~aGlP~gvv~~v~g~ 186 (456)
T cd07110 111 DFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAA----EAGLPPGVLNVVTGT 186 (456)
T ss_pred CceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHH----HcCCCCCcEEEEecC
Confidence 55567889999999999999 996665 689999999999999999999999999998876 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
..+..+.|..||++|+|.||||+++|++++++++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|+++
T Consensus 187 ~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~ 266 (456)
T cd07110 187 GDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSAT 266 (456)
T ss_pred chHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCC
Confidence 4556676777999999999999999999998764 6899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+|||+++|| +|+++|++++++.
T Consensus 267 ~rv~V~~~i~d-~f~~~l~~~~~~~ 290 (456)
T cd07110 267 SRLLVHESIAD-AFLERLATAAEAI 290 (456)
T ss_pred ceEEEcHHHHH-HHHHHHHHHHHhc
Confidence 99999999999 9999999998765
No 27
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=100.00 E-value=2.6e-44 Score=322.26 Aligned_cols=175 Identities=22% Similarity=0.284 Sum_probs=158.6
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.+...+.+++|+|||++|+|| ||.+.. +++++||++||+||+|||+++|.++..+++++. ++|+| |++|++++
T Consensus 107 ~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~----~aGlP~gv~~~v~g 182 (454)
T cd07109 107 PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAE----EAGLPAGALNVVTG 182 (454)
T ss_pred CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HcCcCccceEEEec
Confidence 455677899999999999999 995554 789999999999999999999999999988765 79999 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
..+..+.|..||++|+|.||||+.+|+.|++.++ .+|+++|+|||||+||++|||+++|++.+++|+| ++||.|++
T Consensus 183 ~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a 262 (454)
T cd07109 183 LGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSA 262 (454)
T ss_pred CchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcc
Confidence 5455555556999999999999999999998764 6899999999999999999999999999999999 99999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhcC
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~g 189 (191)
++|+|||+++|| +|+++|++++++..
T Consensus 263 ~~rv~V~~~i~~-~f~~~l~~~~~~~~ 288 (454)
T cd07109 263 GSRLLVHRSIYD-EVLERLVERFRALR 288 (454)
T ss_pred CcEEEEcHHHHH-HHHHHHHHHHHhCC
Confidence 999999999999 99999999988763
No 28
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=100.00 E-value=1.7e-44 Score=323.25 Aligned_cols=173 Identities=21% Similarity=0.277 Sum_probs=158.5
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...+.+++|+|||++|+|| ||.+++ +++++||++||+||+|||+++|+++..+++++. ++|+| |++|++++.
T Consensus 108 ~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~----~aGlP~gvv~~v~g~ 183 (448)
T TIGR01780 108 DKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAE----QAGIPKGVLNVITGS 183 (448)
T ss_pred CceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHH----HcCCCccceEEEeCC
Confidence 44556788999999999999 996666 689999999999999999999999999998875 79999 999999963
Q ss_pred --hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 88 --EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 88 --~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
.+..+.|..||++++|.||||+.+|++|+++++ .+|+++|+|||||+||++|||+|+|++.+++|+| ++||.|++
T Consensus 184 ~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a 263 (448)
T TIGR01780 184 RAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVC 263 (448)
T ss_pred CchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccC
Confidence 556677777999999999999999999998775 5899999999999999999999999999999999 99999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++|+|||+++|| +|+++|++++++.
T Consensus 264 ~~rv~V~~~i~d-~f~~~l~~~~~~l 288 (448)
T TIGR01780 264 ANRLYVHDGIYD-EFAKKLAEAVKKL 288 (448)
T ss_pred CceeechHHHHH-HHHHHHHHHHHhc
Confidence 999999999999 9999999998875
No 29
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=4e-44 Score=323.89 Aligned_cols=171 Identities=18% Similarity=0.212 Sum_probs=155.7
Q ss_pred eeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCchH
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTREE 89 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~~~ 89 (191)
..+.+++|+|||++|+|| ||...+ +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++..+
T Consensus 127 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~----~aGlP~gvv~~v~g~~~ 202 (487)
T PRK09457 127 AAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQ----QAGLPAGVLNLVQGGRE 202 (487)
T ss_pred eeEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HhCcCcCeEEEEeCCHH
Confidence 456789999999999999 996555 689999999999999999999999999988876 69999 99999997545
Q ss_pred HHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 90 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
..+.|..||++|+|.||||+++|++|++.++ .+++++|+|||||+||++|||+|.|++.+++++| ++||.|++++|
T Consensus 203 ~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~r 282 (487)
T PRK09457 203 TGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARR 282 (487)
T ss_pred HHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCce
Confidence 6676777999999999999999999998643 3678999999999999999999999999999999 99999999999
Q ss_pred EEEecCcC-CcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHF-QGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~-~~~f~~~l~~~~~~~ 188 (191)
+|||+++| | +|+++|++++++.
T Consensus 283 v~V~~~i~~d-~f~~~l~~~~~~~ 305 (487)
T PRK09457 283 LLVPQGAQGD-AFLARLVAVAKRL 305 (487)
T ss_pred EEEeccccHH-HHHHHHHHHHhcC
Confidence 99999998 9 9999999998875
No 30
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=100.00 E-value=3e-44 Score=323.46 Aligned_cols=174 Identities=22% Similarity=0.270 Sum_probs=159.5
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+..++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++
T Consensus 126 ~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~----~aGlP~gvv~vv~g~ 201 (473)
T cd07097 126 GVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILE----EAGLPAGVFNLVMGS 201 (473)
T ss_pred CceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHH----HcCCCCcceEEeccC
Confidence 44567889999999999999 996555 789999999999999999999999999998875 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
.+++.+.|..||++|+|.||||+.+++.+++.++ .+|+++|+|||||+||++|||++.|++.+++++| ++||.|+++
T Consensus 202 ~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~ 281 (473)
T cd07097 202 GSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTAS 281 (473)
T ss_pred chHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCC
Confidence 4556677777999999999999999999988764 6899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhcC
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~g 189 (191)
+|+|||+++|| +|+++|++++++..
T Consensus 282 ~rv~V~~~i~d-~f~~~l~~~~~~~~ 306 (473)
T cd07097 282 SRLIVTEGIHD-RFVEALVERTKALK 306 (473)
T ss_pred eeEEEehhHHH-HHHHHHHHHHHhCC
Confidence 99999999999 99999999998763
No 31
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=100.00 E-value=2.5e-44 Score=325.13 Aligned_cols=173 Identities=22% Similarity=0.188 Sum_probs=156.8
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
...+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++ .
T Consensus 127 ~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~----~aGlP~gvv~~v~g~~ 202 (488)
T TIGR02299 127 HLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAK----EAGLPDGVFNLVHGFG 202 (488)
T ss_pred ceEEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHH----HcCcChhheeEEeCCc
Confidence 3456789999999999999 995554 789999999999999999999999888877764 79999 99999996 4
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
.+..+.|..||++|+|.||||+.+|+++++.++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|++++
T Consensus 203 ~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~ 282 (488)
T TIGR02299 203 EEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASS 282 (488)
T ss_pred hHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCc
Confidence 455566667999999999999999999998764 7999999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhcC
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~g 189 (191)
|+|||+++|| +|+++|++++++..
T Consensus 283 rv~V~~~v~d-~f~~~l~~~~~~l~ 306 (488)
T TIGR02299 283 RLLVQESIAE-DFVEKLVERVRAIR 306 (488)
T ss_pred EEEEcHHHHH-HHHHHHHHHHhhCC
Confidence 9999999999 99999999998763
No 32
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=100.00 E-value=2.3e-44 Score=328.81 Aligned_cols=172 Identities=21% Similarity=0.220 Sum_probs=157.2
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
...+..++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++ .
T Consensus 187 ~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~----eaGlP~gvv~vv~g~~ 262 (538)
T PLN02466 187 HHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLH----EAGLPPGVLNVVSGFG 262 (538)
T ss_pred ceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHH----hcCCCcccEEEEecCc
Confidence 3457889999999999999 995554 789999999999999999999999999988875 79999 99999996 5
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
.+.++.|..||++|+|.||||+++|+.|++.++ .+|+++|+|||||+||++|||+|.|++.+++++| ++||.|+++
T Consensus 263 ~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~ 342 (538)
T PLN02466 263 PTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAG 342 (538)
T ss_pred hhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcC
Confidence 566777777999999999999999999988764 4899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+|||+++|| +|+++|+++..+.
T Consensus 343 ~rv~V~~~i~d-~f~~~l~~~~~~~ 366 (538)
T PLN02466 343 SRTFVHERVYD-EFVEKAKARALKR 366 (538)
T ss_pred cEEEEcHHHHH-HHHHHHHHHHHhc
Confidence 99999999999 9999999876654
No 33
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=100.00 E-value=2.8e-44 Score=324.92 Aligned_cols=171 Identities=18% Similarity=0.203 Sum_probs=157.3
Q ss_pred eeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-ch
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-RE 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~ 88 (191)
..+.+++|+|||++|+|| ||... .+++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++ ..
T Consensus 140 ~~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----~aglP~gv~~~v~g~~~ 215 (486)
T cd07140 140 LTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTV----KAGFPKGVINILPGSGS 215 (486)
T ss_pred eEEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHH----HcCcCCCcEEEEecCch
Confidence 456789999999999999 99654 5799999999999999999999999998887765 79999 99999996 55
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
+..+.|..||+|++|.||||+++|+.++++++ .+|+++|+|||||+||++|||+|.|++.+++++| ++||.|++++
T Consensus 216 ~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ 295 (486)
T cd07140 216 LVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAG 295 (486)
T ss_pred HHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCc
Confidence 66777777999999999999999999998764 4899999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++|| +|+++|++++++.
T Consensus 296 rl~V~~~i~~-~f~~~l~~~~~~l 318 (486)
T cd07140 296 RLFVEESIHD-EFVRRVVEEVKKM 318 (486)
T ss_pred EEEEcHHHHH-HHHHHHHHHHHhC
Confidence 9999999999 9999999999875
No 34
>PLN02467 betaine aldehyde dehydrogenase
Probab=100.00 E-value=2.9e-44 Score=325.98 Aligned_cols=173 Identities=24% Similarity=0.245 Sum_probs=158.3
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+.+|+|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++
T Consensus 142 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~----eag~P~gvv~~v~g~ 217 (503)
T PLN02467 142 TFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICR----EVGLPPGVLNVVTGL 217 (503)
T ss_pred CceeEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHH----HcCcCcCeEEEEeCC
Confidence 33467789999999999999 995555 799999999999999999999999999988875 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
..+..+.|..||++|+|.||||+.+|++|++.++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|+++
T Consensus 218 ~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~ 297 (503)
T PLN02467 218 GTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSAT 297 (503)
T ss_pred chhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCC
Confidence 4556666677999999999999999999998765 6899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+|||++++| +|+++|++++++.
T Consensus 298 ~rv~V~~~i~d-~f~~~l~~~~~~l 321 (503)
T PLN02467 298 SRLLVHERIAS-EFLEKLVKWAKNI 321 (503)
T ss_pred cEEEEcHHHHH-HHHHHHHHHHHhc
Confidence 99999999999 9999999998875
No 35
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=100.00 E-value=2.6e-44 Score=324.04 Aligned_cols=172 Identities=17% Similarity=0.158 Sum_probs=156.9
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+..++|+|||++|+|| ||.... +++++||++||+||+|||+.+|.++..+++++. + ++| |++|++++
T Consensus 128 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~----~-~lP~gv~~~v~g~ 202 (472)
T TIGR03374 128 GHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAK----D-IFPAGVVNILFGR 202 (472)
T ss_pred CceEEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHH----H-hCCcCeEEEEecC
Confidence 33456789999999999999 995555 789999999999999999999999999999885 3 499 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
..++++.|..||++|+|.||||+++|++++++++ .+|+++|+|||||+||++|||+|.|++.+++++| ++||.|+++
T Consensus 203 ~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~ 282 (472)
T TIGR03374 203 GKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAA 282 (472)
T ss_pred chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccC
Confidence 5566777777999999999999999999988775 6999999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+|||+++|| +|++.|++++++.
T Consensus 283 ~rv~V~~~i~~-~f~~~l~~~~~~l 306 (472)
T TIGR03374 283 CRIYAQRGIYD-TLVEKLGAAVATL 306 (472)
T ss_pred CEEEEcHHHHH-HHHHHHHHHHhcC
Confidence 99999999999 9999999998775
No 36
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=100.00 E-value=4.3e-44 Score=321.71 Aligned_cols=174 Identities=21% Similarity=0.263 Sum_probs=161.5
Q ss_pred eEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCchHH
Q psy18173 14 LSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTREEI 90 (191)
Q Consensus 14 ~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~~~~ 90 (191)
.++.++|+|||++|+|| ||...+ .++++||++||+||+|||+++|+++..+++++.++|+++|+| |++|++++..+.
T Consensus 114 ~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~ 193 (465)
T cd07098 114 ARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPET 193 (465)
T ss_pred eEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHH
Confidence 46678999999999999 996665 589999999999999999999999999999999999999999 999999964356
Q ss_pred HHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceEE
Q psy18173 91 SDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETLL 167 (191)
Q Consensus 91 ~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v~ 167 (191)
.+.|..||+|++|.||||+.+++++++.+. .+|+++|+|||||+||++|||+++|++.+++|+| ++||.|++++|+|
T Consensus 194 ~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~ 273 (465)
T cd07098 194 AEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVI 273 (465)
T ss_pred HHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEE
Confidence 666677999999999999999999988764 6999999999999999999999999999999999 9999999999999
Q ss_pred EecCcCCcchHHHHHHHHHhc
Q psy18173 168 IHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 168 V~~~i~~~~f~~~l~~~~~~~ 188 (191)
||+++|| +|++.|++++++.
T Consensus 274 V~~~i~d-~f~~~L~~~~~~l 293 (465)
T cd07098 274 VHEKIYD-KLLEILTDRVQAL 293 (465)
T ss_pred EcHHHHH-HHHHHHHHHHHhc
Confidence 9999999 9999999998765
No 37
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=100.00 E-value=4.2e-44 Score=323.40 Aligned_cols=172 Identities=20% Similarity=0.229 Sum_probs=157.3
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+..++|+|||++|+|| ||..+ .+++++||++||+||+|||+.+|+++..+.+++. ++|+| |++|++++
T Consensus 135 ~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~ 210 (484)
T cd07144 135 NKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVK----EAGFPPGVVNIIPGY 210 (484)
T ss_pred CceEEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHH----HhCcCCCcEEEEecC
Confidence 34457789999999999999 99655 4789999999999999999999999999888765 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
..+..+.|..||++|+|.||||+++|+.+++.++ .+|+++|+|||||+||++|||++.|++.+++|+| ++||.|+++
T Consensus 211 ~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~ 290 (484)
T cd07144 211 GAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTAT 290 (484)
T ss_pred CchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC
Confidence 4556777777999999999999999999998764 6899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHh
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRD 187 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~ 187 (191)
+|+|||+++|| +|++.|++++++
T Consensus 291 ~rv~V~~~i~d-~f~~~l~~~~~~ 313 (484)
T cd07144 291 SRIYVQESIYD-KFVEKFVEHVKQ 313 (484)
T ss_pred ceEEEcHHHHH-HHHHHHHHHHHh
Confidence 99999999999 999999999875
No 38
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=100.00 E-value=3.9e-44 Score=323.42 Aligned_cols=168 Identities=26% Similarity=0.287 Sum_probs=151.9
Q ss_pred eeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-ch
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-RE 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~ 88 (191)
..++.|+|+|||++|+|| ||... .+++++||++||+||+|||+.+|+++.++++++. + ++| |++|+++| .+
T Consensus 105 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~----~-~lp~gvv~vv~G~~~ 179 (484)
T PLN02174 105 SAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLE----Q-YLDSSAVRVVEGAVT 179 (484)
T ss_pred ceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHH----H-hCCCCEEEEEECChH
Confidence 356789999999999999 99544 4799999999999999999999999999999885 4 699 99999996 44
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc--CCCCccccCc
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC--DYPAACNAME 164 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~--~~GQ~C~s~~ 164 (191)
....++ ++++|+|+||||+++|+.|++.++ .+|+++|+|||||+||++|||++.|++.+++++| |+||.|++++
T Consensus 180 ~~~~l~--~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~~ 257 (484)
T PLN02174 180 ETTALL--EQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPD 257 (484)
T ss_pred HHHHHh--cccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHhhCCCCCCCCcCc
Confidence 444444 389999999999999999998764 7999999999999999999999999999999996 7899999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++|| +|+++|++++++.
T Consensus 258 rv~V~~~i~d-~f~~~l~~~~~~~ 280 (484)
T PLN02174 258 YILTTKEYAP-KVIDAMKKELETF 280 (484)
T ss_pred EEEEeHHHHH-HHHHHHHHHHHhh
Confidence 9999999999 9999999998765
No 39
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=100.00 E-value=4.6e-44 Score=322.90 Aligned_cols=174 Identities=22% Similarity=0.230 Sum_probs=158.9
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.+...+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++
T Consensus 124 ~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~----~aGlP~gv~~~v~g 199 (482)
T cd07119 124 PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIE----EAGLPAGVVNLVTG 199 (482)
T ss_pred CCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHH----HcCCCcCcEEEEec
Confidence 344567899999999999999 995555 689999999999999999999999999888875 69999 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
.++..+.|..||++|+|.||||+++|++++++++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|++
T Consensus 200 ~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a 279 (482)
T cd07119 200 SGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSA 279 (482)
T ss_pred CcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 4546676777999999999999999999998764 6899999999999999999999999999999999 99999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++|+|||+++|| +|+++|++++++.
T Consensus 280 ~~~v~V~~~i~d-~f~~~l~~~~~~~ 304 (482)
T cd07119 280 GSRLLVEESIHD-KFVAALAERAKKI 304 (482)
T ss_pred CeEEEEcHHHHH-HHHHHHHHHHHhc
Confidence 999999999999 9999999998876
No 40
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=100.00 E-value=5.2e-44 Score=322.07 Aligned_cols=172 Identities=22% Similarity=0.265 Sum_probs=157.5
Q ss_pred eeeEEEeecc-eeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 12 LSLSQVTVPI-GVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 12 ~~~~~~~~Pl-Gvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
...+..++|+ |||++|+|| ||.++. +++++||++||+||+|||+.+|.++..++++++ ++|+| |++|++++
T Consensus 130 ~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~----~aGlP~gvv~~v~g~ 205 (472)
T TIGR03250 130 RKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILY----EAGLPPQMLQVVTGD 205 (472)
T ss_pred ceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HcCCCcccEEEEecC
Confidence 3467889998 999999999 995554 689999999999999999999999999888775 69999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
..+..+.|..||++++|.||||+.+|+.+++.++.+|+++|+|||||+||++|||+++|++.+++++| ++||.|++++|
T Consensus 206 ~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~r 285 (472)
T TIGR03250 206 PREIADELITNPHVDLVTFTGGVAIGKYIAARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKR 285 (472)
T ss_pred chHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhcCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcE
Confidence 45555656669999999999999999999988878999999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||+++|| +|++.|++++++.
T Consensus 286 v~V~~~i~d-~f~~~l~~~~~~~ 307 (472)
T TIGR03250 286 MLVQESVAD-RFTELLVEKTRAW 307 (472)
T ss_pred EEEeHhHHH-HHHHHHHHHHHhc
Confidence 999999999 9999999998875
No 41
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=100.00 E-value=5.4e-44 Score=321.97 Aligned_cols=174 Identities=22% Similarity=0.209 Sum_probs=158.8
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.+...+..++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++
T Consensus 131 ~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~----~aglP~g~~~~v~g 206 (476)
T cd07091 131 GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIK----EAGFPPGVVNIVPG 206 (476)
T ss_pred CCceEEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHH----HcCcCCCcEEEEeC
Confidence 344567789999999999999 996555 689999999999999999999999999998876 69999 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccc
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACN 161 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~ 161 (191)
..+..+.|..||++|+|.||||+.+|+.+++.++ .+|+++|+|||||+||++|||++.|++.+++|+| ++||.|+
T Consensus 207 ~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~ 286 (476)
T cd07091 207 FGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCC 286 (476)
T ss_pred CChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCc
Confidence 4556677777999999999999999999998764 4899999999999999999999999999999999 9999999
Q ss_pred cCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 162 AMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 162 s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+++|+|||+++|| +|++.|++++++.
T Consensus 287 a~~rv~V~~~v~~-~f~~~L~~~~~~~ 312 (476)
T cd07091 287 AGSRIFVQESIYD-EFVEKFKARAEKR 312 (476)
T ss_pred CCcEEEEeHHHHH-HHHHHHHHHHhhC
Confidence 9999999999999 9999999998875
No 42
>PLN02278 succinic semialdehyde dehydrogenase
Probab=100.00 E-value=6.4e-44 Score=323.38 Aligned_cols=171 Identities=21% Similarity=0.219 Sum_probs=156.5
Q ss_pred eeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-ch
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-RE 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~ 88 (191)
..+.+|+|+|||++|+|| ||.+.. +++++||++||+||+|||+.+|.++..+.+++. ++|+| |++|++++ .+
T Consensus 153 ~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~----eaglP~gvv~~v~g~~~ 228 (498)
T PLN02278 153 RLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELAL----QAGIPPGVLNVVMGDAP 228 (498)
T ss_pred eEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HcCCCcccEEEEecCCh
Confidence 456788999999999999 996555 689999999999999999999999998887764 79999 99999996 44
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
+..+.|..||+||+|.||||+++|+.|++.++ .+|+++|+|||||+||++|||+|.|++.+++++| ++||.|++++|
T Consensus 229 ~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~r 308 (498)
T PLN02278 229 EIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANR 308 (498)
T ss_pred hhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcE
Confidence 56666667999999999999999999998775 5899999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||+++|| +|+++|++++++.
T Consensus 309 v~V~~~i~~-~f~~~L~~~~~~l 330 (498)
T PLN02278 309 ILVQEGIYD-KFAEAFSKAVQKL 330 (498)
T ss_pred EEEeHHHHH-HHHHHHHHHHHhc
Confidence 999999999 9999999998876
No 43
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=100.00 E-value=5.6e-44 Score=322.13 Aligned_cols=174 Identities=17% Similarity=0.199 Sum_probs=158.0
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...+.+++|+|||++|+|| ||..+ .+++++||++||+||+|||+.+|+++..+++++. ++|+| |++|++++.
T Consensus 127 ~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~----~aGlP~gvv~~v~g~ 202 (478)
T cd07085 127 GIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQ----EAGLPDGVLNVVHGG 202 (478)
T ss_pred CceeEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHH----HhCCCCCcEEEEecC
Confidence 44567889999999999999 99555 4789999999999999999999999999988876 68999 999999964
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
.+..+.|..||++|+|.||||+++|+.++++++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|++++
T Consensus 203 ~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~ 282 (478)
T cd07085 203 KEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALS 282 (478)
T ss_pred HHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCe
Confidence 344566666999999999999999999988765 6999999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhcC
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~g 189 (191)
|+|||+++|| +|+++|++++++..
T Consensus 283 rv~V~~~i~~-~f~~~L~~~~~~l~ 306 (478)
T cd07085 283 VAVAVGDEAD-EWIPKLVERAKKLK 306 (478)
T ss_pred EEEEeHHHHH-HHHHHHHHHHHhCC
Confidence 9999999999 99999999998763
No 44
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=100.00 E-value=5.9e-44 Score=320.98 Aligned_cols=170 Identities=21% Similarity=0.191 Sum_probs=156.4
Q ss_pred eEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-chH
Q psy18173 14 LSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-REE 89 (191)
Q Consensus 14 ~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~~ 89 (191)
.+.+++|+|||++|+|| ||..+ .+++++||++||+||+|||+.+|+++..+++++. ++|+| |++|++++ +++
T Consensus 124 ~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~----~aGlP~g~v~~v~g~~~~ 199 (466)
T cd07138 124 SLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILD----EAGLPAGVFNLVNGDGPV 199 (466)
T ss_pred EEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHH----HcCCCCCcEEEEeCCchh
Confidence 45689999999999999 99544 4789999999999999999999999999888775 79999 99999996 555
Q ss_pred HHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceE
Q psy18173 90 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETL 166 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v 166 (191)
..+.|..||++++|.||||+.+|+.|++.++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|++++|+
T Consensus 200 ~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv 279 (466)
T cd07138 200 VGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRM 279 (466)
T ss_pred HHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEE
Confidence 6777777999999999999999999998875 6899999999999999999999999999999999 999999999999
Q ss_pred EEecCcCCcchHHHHHHHHHhc
Q psy18173 167 LIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 167 ~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|||+++|| +|++.|++++++.
T Consensus 280 ~V~~~i~d-~f~~~l~~~~~~~ 300 (466)
T cd07138 280 LVPRSRYA-EAEEIAAAAAEAY 300 (466)
T ss_pred EEeHhHHH-HHHHHHHHHHHhc
Confidence 99999999 9999999998765
No 45
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=100.00 E-value=7.7e-44 Score=317.39 Aligned_cols=171 Identities=19% Similarity=0.231 Sum_probs=155.3
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
...+.+++|+|||++|+|| ||.+++ .++++||++||+||+|||+.+|+++..+.+++. ++|+| |++|++++ .
T Consensus 88 ~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~----~aglP~gvv~~v~g~~ 163 (429)
T cd07100 88 GKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFR----EAGFPEGVFQNLLIDS 163 (429)
T ss_pred ceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HcCCCcCcEEEEeCCc
Confidence 3456789999999999999 996665 689999999999999999999999998888765 79999 99999996 4
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
+... .+..|+++++|.||||+++|+.|++.++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|++++
T Consensus 164 ~~~~-~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~ 242 (429)
T cd07100 164 DQVE-AIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAK 242 (429)
T ss_pred hhHH-HHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCe
Confidence 4444 4555999999999999999999998764 6899999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++|| +|++.|++++++.
T Consensus 243 rv~v~~~i~~-~f~~~l~~~~~~~ 265 (429)
T cd07100 243 RFIVHEDVYD-EFLEKFVEAMAAL 265 (429)
T ss_pred EEEEcHHHHH-HHHHHHHHHHHhc
Confidence 9999999999 9999999998765
No 46
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=100.00 E-value=6.3e-44 Score=319.48 Aligned_cols=173 Identities=22% Similarity=0.251 Sum_probs=157.3
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...+..++|+|||++|+|| ||.... +++++||++||+||+|||+.+|.++..++++++ ++|+| |++|++++.
T Consensus 114 ~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~----~ag~P~g~v~~v~g~ 189 (452)
T cd07147 114 GRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLA----ETGLPKGAFSVLPCS 189 (452)
T ss_pred CceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HcCCCcCcEEEEeCC
Confidence 44556788999999999999 995555 689999999999999999999999999998876 68999 999999963
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceE
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETL 166 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v 166 (191)
.+..+.|..||++|+|+||||+++|+.|+++++.+|+++|+|||||+||++|||+|.|++.+++++| ++||.|++++|+
T Consensus 190 ~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v 269 (452)
T cd07147 190 RDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRV 269 (452)
T ss_pred ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCcCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEE
Confidence 3345566669999999999999999999998777899999999999999999999999999999999 999999999999
Q ss_pred EEecCcCCcchHHHHHHHHHhc
Q psy18173 167 LIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 167 ~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|||+++|| +|+++|++++++.
T Consensus 270 ~V~~~i~d-~f~~~L~~~~~~~ 290 (452)
T cd07147 270 LVHRSVYD-EFKSRLVARVKAL 290 (452)
T ss_pred EEchhHHH-HHHHHHHHHHHhC
Confidence 99999999 9999999999876
No 47
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=100.00 E-value=7.5e-44 Score=321.71 Aligned_cols=173 Identities=20% Similarity=0.165 Sum_probs=157.9
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+..++|+|||++|+|| ||..+ .+++++||++||+||+|||+++|.++..+++++. ++|+| |++|++++
T Consensus 135 ~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~----~aGlP~g~v~~v~g~ 210 (481)
T cd07143 135 KKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIP----EAGFPPGVINVVSGY 210 (481)
T ss_pred CceEEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHH----hcCcCcccEEEEeCC
Confidence 34566789999999999999 99666 4799999999999999999999999998888765 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
..+..+.|..||++|+|.||||+.+|+.+++.++ .+|+++|+|||||+||++|||+++|++.+++|+| |+||.|++
T Consensus 211 ~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a 290 (481)
T cd07143 211 GRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCA 290 (481)
T ss_pred chhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCC
Confidence 4556677777999999999999999999988763 5789999999999999999999999999999999 99999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++|+|||+++|| +|++.|++++++.
T Consensus 291 ~~rv~V~~~i~d-~f~~~l~~~~~~~ 315 (481)
T cd07143 291 GSRIYVQEGIYD-KFVKRFKEKAKKL 315 (481)
T ss_pred CcEEEEeHhHHH-HHHHHHHHHHHhc
Confidence 999999999999 9999999998876
No 48
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=100.00 E-value=7.3e-44 Score=320.41 Aligned_cols=173 Identities=25% Similarity=0.262 Sum_probs=155.3
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHH-HHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSN-KALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~-~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
|...+.+++|+|||++|+|| ||... .+++++||++||+||+|||+.+|.++ .++.++ +.++|+| |++|++++
T Consensus 121 ~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~----l~~aG~P~gvv~~v~g 196 (465)
T cd07151 121 GKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKI----FEEAGLPKGVLNVVVG 196 (465)
T ss_pred CceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHH----HHHcCcCccceEEEec
Confidence 44567789999999999999 99544 57899999999999999999999986 455555 4589999 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
..+..+.|..||++++|.||||+++|+.+++.++ .+|+++|+|||||+||++|||+|.|++.+++++| ++||.|++
T Consensus 197 ~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a 276 (465)
T cd07151 197 AGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMA 276 (465)
T ss_pred CchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcC
Confidence 4556666677999999999999999999988765 6899999999999999999999999999999999 99999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++|+|||+++|| +|++.|++++++.
T Consensus 277 ~~rv~V~~~i~~-~f~~~l~~~~~~~ 301 (465)
T cd07151 277 INRIIVHEDVYD-EFVEKFVERVKAL 301 (465)
T ss_pred CcEEEEeHHHHH-HHHHHHHHHHHhC
Confidence 999999999999 9999999998876
No 49
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=100.00 E-value=6.5e-44 Score=319.84 Aligned_cols=172 Identities=23% Similarity=0.302 Sum_probs=157.8
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
...+..++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..++++++ ++|+| |++|++++ .
T Consensus 115 ~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~----~ag~p~g~~~~v~g~~ 190 (456)
T cd07145 115 RIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILE----EAGLPPGVINVVTGYG 190 (456)
T ss_pred ceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHH----HcCCCcccEEEEeCCC
Confidence 3456789999999999999 996555 689999999999999999999999999988876 68999 99999996 4
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
.+..+.|..||++++|.||||+++|+.+++.++ .+|+++|+|||||+||++|||+++|++.+++++| ++||.|++++
T Consensus 191 ~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~ 270 (456)
T cd07145 191 SEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVK 270 (456)
T ss_pred chHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCe
Confidence 556666677999999999999999999998775 7999999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++|| +|+++|++++++.
T Consensus 271 rv~V~~~i~d-~f~~~l~~~~~~~ 293 (456)
T cd07145 271 RILVEEEVYD-KFLKLLVEKVKKL 293 (456)
T ss_pred eEEEcHHHHH-HHHHHHHHHHhcC
Confidence 9999999999 9999999998875
No 50
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=100.00 E-value=6.8e-44 Score=321.84 Aligned_cols=173 Identities=21% Similarity=0.215 Sum_probs=157.6
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+..++|+|||++|+|| ||..+ .+++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++
T Consensus 136 ~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~----~aGlP~gvv~~v~g~ 211 (481)
T cd07141 136 DFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIK----EAGFPPGVVNVVPGY 211 (481)
T ss_pred CceEEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHH----HcCcCccceEEEecC
Confidence 34466789999999999999 99666 4789999999999999999999999999888775 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
..+..+.|..||++|+|.||||+.+|+.+++.++ .+|+++|+|||||+||++|||++.|++.+++|+| ++||.|++
T Consensus 212 ~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a 291 (481)
T cd07141 212 GPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCA 291 (481)
T ss_pred chHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccC
Confidence 4456677777999999999999999999987654 4899999999999999999999999999999999 99999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++|+|||+++|| +|++.|++++++.
T Consensus 292 ~~rv~V~~~i~d-~f~~~l~~~~~~~ 316 (481)
T cd07141 292 GSRTFVQESIYD-EFVKRSVERAKKR 316 (481)
T ss_pred CeEEEEcHHHHH-HHHHHHHHHHHhC
Confidence 999999999999 9999999988765
No 51
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=100.00 E-value=7.2e-44 Score=319.31 Aligned_cols=174 Identities=24% Similarity=0.245 Sum_probs=158.8
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.+...+.+++|+|||++|+|| ||..+. .++++||++||+||+|||+++|.++..+.+++. ++|+| |++|++++
T Consensus 107 ~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~----~aGlP~~~~~~v~g 182 (453)
T cd07115 107 GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMA----EAGFPAGVLNVVTG 182 (453)
T ss_pred CCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHH----hcCcCchheEEEec
Confidence 444567889999999999999 996555 689999999999999999999999999998875 69999 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
..+..+.|..||++|+|+||||+++|+.+++.++ .+|+++|+|||||+||++|||++.|++.+++++| ++||.|++
T Consensus 183 ~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a 262 (453)
T cd07115 183 FGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTA 262 (453)
T ss_pred CchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCC
Confidence 4556677777999999999999999999998764 6899999999999999999999999999999999 99999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++|+|||++++| +|++.|++++++.
T Consensus 263 ~~~v~V~~~i~~-~f~~~l~~~~~~~ 287 (453)
T cd07115 263 GSRLLVHESIYD-EFLERFTSLARSL 287 (453)
T ss_pred CeEEEEcHHHHH-HHHHHHHHHHhcC
Confidence 999999999999 9999999998765
No 52
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=100.00 E-value=1.1e-43 Score=319.98 Aligned_cols=171 Identities=21% Similarity=0.279 Sum_probs=157.8
Q ss_pred eeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-ch
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-RE 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~ 88 (191)
..+.+++|+|||++|+|| ||..++ +++++||++||+||+|||+.+|+++..+++++. ++|+| |++|++++ ..
T Consensus 128 ~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~----~aGlP~gvv~~v~g~~~ 203 (478)
T cd07131 128 DAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFA----EAGLPPGVVNVVHGRGE 203 (478)
T ss_pred eEEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHH----hcCcCCCcEEEEecCch
Confidence 467889999999999999 996666 689999999999999999999999999988865 79999 99999996 45
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
+..+.|..||++|+|+||||+.+|+.+++.++ .+|+++|+|||||+||++|||+|.|++.+++++| ++||.|++++|
T Consensus 204 ~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~r 283 (478)
T cd07131 204 EVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSR 283 (478)
T ss_pred HHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeE
Confidence 46777777999999999999999999988764 6899999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||+++|| +|++.|++++++.
T Consensus 284 v~V~~~i~~-~f~~~l~~~~~~~ 305 (478)
T cd07131 284 LIVHESVYD-EFLKRFVERAKRL 305 (478)
T ss_pred EEEehhhHH-HHHHHHHHHHHhc
Confidence 999999999 9999999999876
No 53
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=100.00 E-value=1.1e-43 Score=317.46 Aligned_cols=174 Identities=20% Similarity=0.194 Sum_probs=155.9
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHH-HHHHHHHHHHHHhcCCC-CeEEEec
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSN-KALMDVVKEALASVGAQ-DAISLVS 85 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~-~~~~~~~~~~l~~aGlP-g~v~~l~ 85 (191)
.|...+.+++|+|||++|+|| ||.++. +++++||++||+||+|||+++|.++ ..+.+++ .++|+| |++|+++
T Consensus 100 ~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~~----~~ag~P~gvv~~v~ 175 (443)
T cd07152 100 PGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLF----EEAGLPAGVLHVLP 175 (443)
T ss_pred CCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHHHH----HHhCcCcCcEEEec
Confidence 354567789999999999999 996555 6899999999999999999999996 5666555 579999 9999999
Q ss_pred CchHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 86 TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 86 ~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
+..+..+.|..||++|+|.||||+.++++|++.++ .+|+++|+|||||+||++|||++.|++.+++++| ++||.|++
T Consensus 176 g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a 255 (443)
T cd07152 176 GGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMA 255 (443)
T ss_pred CChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcC
Confidence 74445666677999999999999999999988764 6899999999999999999999999999999999 99999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++|+|||+++|| +|+++|++++++.
T Consensus 256 ~~rv~V~~~i~~-~f~~~l~~~~~~~ 280 (443)
T cd07152 256 AGRHLVHESVAD-AYTAKLAAKAKHL 280 (443)
T ss_pred CeeEEEcHHHHH-HHHHHHHHHHHhC
Confidence 999999999999 9999999998775
No 54
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=100.00 E-value=8.8e-44 Score=319.13 Aligned_cols=173 Identities=20% Similarity=0.211 Sum_probs=157.6
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+.+++|+|||++|+|| ||..++ +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++
T Consensus 110 ~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~----~aG~P~g~~~~v~g~ 185 (454)
T cd07118 110 DMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLI----EAGLPAGVVNIVTGY 185 (454)
T ss_pred CceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHH----hcCCCccceEEEecC
Confidence 33456789999999999999 996654 789999999999999999999999999888775 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
..+..+.|..|+++|+|.||||+++|+++++.++ .+|+++|+|||||+||++|||++.|++.+++|+| ++||.|+++
T Consensus 186 ~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~ 265 (454)
T cd07118 186 GATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSG 265 (454)
T ss_pred CchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCC
Confidence 4456676777999999999999999999988764 6899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+|||+++|| +|++.|++++++.
T Consensus 266 ~rv~V~~~i~d-~f~~~L~~~~~~l 289 (454)
T cd07118 266 SRLLVHESIAD-AFVAAVVARSRKV 289 (454)
T ss_pred ceEEEcHHHHH-HHHHHHHHHHHhc
Confidence 99999999999 9999999998876
No 55
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=100.00 E-value=7.9e-44 Score=320.23 Aligned_cols=171 Identities=17% Similarity=0.178 Sum_probs=157.4
Q ss_pred eeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-ch
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-RE 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~ 88 (191)
..+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++ ..
T Consensus 126 ~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~----~aglP~gv~~~v~g~~~ 201 (467)
T TIGR01804 126 FSYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELME----EAGLPDGVFNVVLGKGA 201 (467)
T ss_pred eEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHH----HcCcCcCcEEEEeCCcH
Confidence 456789999999999999 995555 689999999999999999999999999988775 79999 99999996 35
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
+..+.|..||++|+|+||||+++|++|+++++ .+|+++|+|||||+||++|||++.|++.+++++| ++||.|++++|
T Consensus 202 ~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~r 281 (467)
T TIGR01804 202 EVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTR 281 (467)
T ss_pred HHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCE
Confidence 66777777999999999999999999998774 5899999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||+++|| +|+++|++++++.
T Consensus 282 v~V~~~i~d-~f~~~l~~~~~~~ 303 (467)
T TIGR01804 282 VFVHNKIKE-KFEARLVERTKRI 303 (467)
T ss_pred EEEcHHHHH-HHHHHHHHHHHhC
Confidence 999999999 9999999998875
No 56
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=100.00 E-value=1.7e-43 Score=323.11 Aligned_cols=172 Identities=22% Similarity=0.262 Sum_probs=160.4
Q ss_pred EEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c-hHH
Q psy18173 16 QVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R-EEI 90 (191)
Q Consensus 16 ~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~-~~~ 90 (191)
..++|+||+++|+|| ||.++. .++++||++||+||||||+.+|+++.++.+++.++|.++|+| |+||++++ . .+.
T Consensus 189 ~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~ 268 (549)
T cd07127 189 FTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPI 268 (549)
T ss_pred eEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHH
Confidence 378999999999999 997775 578999999999999999999999999999999999999999 99999985 3 456
Q ss_pred HHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceEEEe
Q psy18173 91 SDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETLLIH 169 (191)
Q Consensus 91 ~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v~V~ 169 (191)
.+.|..||++++|.||||+++|++|.+.++.+|+++|+|||||+||++|||++.+++.+++|+| ++||+|++++|+|||
T Consensus 269 ~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~ 348 (549)
T cd07127 269 AQTLATRPEVRIIDFTGSNAFGDWLEANARQAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVP 348 (549)
T ss_pred HHHHHhCCCCCEEEEECCHHHHHHHHHHhccCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEE
Confidence 6767779999999999999999999998888999999999999999999999999999999999 999999999999999
Q ss_pred cC---------cCCcchHHHHHHHHHhc
Q psy18173 170 ED---------HFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 170 ~~---------i~~~~f~~~l~~~~~~~ 188 (191)
++ +|| +|++.|++++++.
T Consensus 349 ~s~i~~~~g~~i~d-~f~~~L~~~~~~l 375 (549)
T cd07127 349 RDGIQTDDGRKSFD-EVAADLAAAIDGL 375 (549)
T ss_pred CCccccccchhHHH-HHHHHHHHHHHHh
Confidence 99 899 9999999988764
No 57
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=100.00 E-value=2.1e-43 Score=319.02 Aligned_cols=171 Identities=19% Similarity=0.214 Sum_probs=154.9
Q ss_pred eeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCchH
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTREE 89 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~~~ 89 (191)
..+..++|+|||++|+|| ||...+ +++++||++||+||+|||+.+|+++..++++++ ++|+| |++|++++..+
T Consensus 125 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~----~aGlP~gvv~~v~g~~~ 200 (484)
T TIGR03240 125 RAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWE----KAGLPAGVLNLVQGARE 200 (484)
T ss_pred eeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHH----HhCcCcccEEEEeCCHH
Confidence 356788999999999999 996555 689999999999999999999999999998876 69999 99999997545
Q ss_pred HHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 90 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
..+.|..||++|+|.||||+++|++|+++++ .+++++|+|||||+||++|||+|.|++.+++++| ++||.|++++|
T Consensus 201 ~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~r 280 (484)
T TIGR03240 201 TGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARR 280 (484)
T ss_pred HHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcE
Confidence 5677777999999999999999999998753 4678999999999999999999999999999999 99999999999
Q ss_pred EEEecCcC-CcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHF-QGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~-~~~f~~~l~~~~~~~ 188 (191)
+|||++++ | +|+++|++++++.
T Consensus 281 v~V~~~~~~d-~f~~~l~~~~~~~ 303 (484)
T TIGR03240 281 LLVPDGAQGD-AFLARLVEVAERL 303 (484)
T ss_pred EEEeccccHH-HHHHHHHHHHHhc
Confidence 99999995 8 9999999988764
No 58
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=100.00 E-value=1.9e-43 Score=315.03 Aligned_cols=173 Identities=23% Similarity=0.264 Sum_probs=156.2
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...+.+++|+|||++|+|| ||... ..++++||++||+||+|||+++|.++..+.+++. ++|+| |++|++++.
T Consensus 89 ~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~----~aGlP~gv~~~v~g~ 164 (432)
T cd07105 89 GTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFH----EAGLPKGVLNVVTHS 164 (432)
T ss_pred CceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHH----HcCcCCCcEEEEeCC
Confidence 34556789999999999999 99555 4689999999999999999999999998888765 79999 999999852
Q ss_pred ----hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcc
Q psy18173 88 ----EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAAC 160 (191)
Q Consensus 88 ----~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C 160 (191)
.++.+.+..||++|+|+||||+++|+.+++.++ .+|+++|+|||||+||++|||+++|++.+++++| ++||.|
T Consensus 165 ~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C 244 (432)
T cd07105 165 PEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQIC 244 (432)
T ss_pred CCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCC
Confidence 235566666999999999999999999998764 6899999999999999999999999999999999 999999
Q ss_pred ccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 161 NAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 161 ~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++++|+|||+++|| +|++.|++++++.
T Consensus 245 ~a~~~v~V~~~i~~-~f~~~l~~~~~~~ 271 (432)
T cd07105 245 MSTERIIVHESIAD-EFVEKLKAAAEKL 271 (432)
T ss_pred cCCceEEEcHHHHH-HHHHHHHHHHHhh
Confidence 99999999999999 9999999998765
No 59
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=100.00 E-value=1.7e-43 Score=315.58 Aligned_cols=174 Identities=17% Similarity=0.158 Sum_probs=157.7
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...+..++|+|||++|+|| ||.++. +++++||++||+||+|||+.+|+++..+.+++. ++|+| |++|++++.
T Consensus 88 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~----~ag~P~g~~~~v~g~ 163 (431)
T cd07095 88 QGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWE----EAGLPPGVLNLVQGG 163 (431)
T ss_pred CceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHH----HhCcChhHheEEeCc
Confidence 44567789999999999999 996665 689999999999999999999999998888765 79999 999999974
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
.+..+.+..|+++|.|.||||+++|++|++.++ .+++.+|+|||||+||++|||+++|++.+++|+| ++||.|+++
T Consensus 164 ~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~ 243 (431)
T cd07095 164 RETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCA 243 (431)
T ss_pred HHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCCCCCC
Confidence 445676777999999999999999999988743 4789999999999999999999999999999999 999999999
Q ss_pred ceEEEecC-cCCcchHHHHHHHHHhcC
Q psy18173 164 ETLLIHED-HFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 164 ~~v~V~~~-i~~~~f~~~l~~~~~~~g 189 (191)
+|+|||++ +|| +|++.|++++++..
T Consensus 244 ~rv~V~~~~i~d-~f~~~l~~~~~~~~ 269 (431)
T cd07095 244 RRLIVPDGAVGD-AFLERLVEAAKRLR 269 (431)
T ss_pred eEEEEcCcchHH-HHHHHHHHHHHhCC
Confidence 99999999 999 99999999998763
No 60
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.9e-43 Score=320.20 Aligned_cols=171 Identities=22% Similarity=0.229 Sum_probs=157.9
Q ss_pred eeEEEeecceeEEEEeCC-CCch-hHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-ch
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDS-LPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-RE 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~-~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~ 88 (191)
..+.+++|+|||++|+|| ||.. +.+++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++ ..
T Consensus 151 ~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~----~aglP~g~~~~v~g~~~ 226 (496)
T PLN00412 151 YCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFH----LAGFPKGLISCVTGKGS 226 (496)
T ss_pred eeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHH----HhCCCcccEEEEecCch
Confidence 346789999999999999 9954 45789999999999999999999999999988775 79999 99999996 45
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceEE
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETLL 167 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v~ 167 (191)
+..+.|..||++|+|.|||| +.|++++++++.+|+++|+|||||+||++|||++.|++.+++++| ++||.|++++|+|
T Consensus 227 ~~~~~l~~~~~v~~V~ftGs-~~g~~v~~~a~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~ 305 (496)
T PLN00412 227 EIGDFLTMHPGVNCISFTGG-DTGIAISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVL 305 (496)
T ss_pred HHHHHHhcCCCcCEEEEeCh-HHHHHHHHHhCCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEE
Confidence 67788888999999999999 999999988888999999999999999999999999999999999 9999999999999
Q ss_pred EecCcCCcchHHHHHHHHHhcC
Q psy18173 168 IHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 168 V~~~i~~~~f~~~l~~~~~~~g 189 (191)
||+++|| +|+++|++++++..
T Consensus 306 V~~~i~d-~f~~~l~~~~~~~~ 326 (496)
T PLN00412 306 VMESVAD-ALVEKVNAKVAKLT 326 (496)
T ss_pred EcHHHHH-HHHHHHHHHHHhCc
Confidence 9999999 99999999998763
No 61
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=100.00 E-value=1.9e-43 Score=317.96 Aligned_cols=173 Identities=20% Similarity=0.214 Sum_probs=157.1
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...+..++|+|||++|+|| ||.... +++++||++||+||+|||+.+|+++..+.+++. ++|+| |++|++++.
T Consensus 128 ~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~ 203 (471)
T cd07139 128 GGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAE----EAGLPPGVVNVVPAD 203 (471)
T ss_pred CceEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHH----HcCCCCCcEEEEeCC
Confidence 44567889999999999999 995555 789999999999999999999999988877664 79999 999999974
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
.+..+.|..|+++++|.||||+.+++.+++.++ .+|+++|+|||||+||++|||++.|++.+++|+| ++||.|++++
T Consensus 204 ~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~ 283 (471)
T cd07139 204 REVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALT 283 (471)
T ss_pred HHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCc
Confidence 445666666999999999999999999988764 5899999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++|| +|+++|++++++.
T Consensus 284 ~v~V~~~i~d-~f~~~l~~~~~~~ 306 (471)
T cd07139 284 RILVPRSRYD-EVVEALAAAVAAL 306 (471)
T ss_pred EEEEeHhHHH-HHHHHHHHHHHhC
Confidence 9999999999 9999999999876
No 62
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=1.9e-43 Score=318.31 Aligned_cols=170 Identities=16% Similarity=0.163 Sum_probs=156.5
Q ss_pred eeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-ch
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-RE 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~ 88 (191)
..+..++|+|||++|+|| ||.... +++++||++||+||+|||+.+|+++..+++++. ++ +| |++|++++ ..
T Consensus 131 ~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~----~a-lP~gv~~~v~g~~~ 205 (475)
T PRK13473 131 TSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAA----DI-LPPGVLNVVTGRGA 205 (475)
T ss_pred eeEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHH----Hh-CCcCcEEEEecCch
Confidence 456789999999999999 995555 689999999999999999999999999999886 46 99 99999996 55
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
+..+.|..||++|+|.||||+++|+.|+++++ .+|+++|+|||||+||++|||+|.|++.+++++| |+||.|++++|
T Consensus 206 ~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~r 285 (475)
T PRK13473 206 TVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACR 285 (475)
T ss_pred HHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeE
Confidence 56676677999999999999999999998775 5899999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||+++|| +|+++|++++++.
T Consensus 286 v~V~~~i~d-~f~~~l~~~~~~l 307 (475)
T PRK13473 286 IYAQRGIYD-DLVAKLAAAVATL 307 (475)
T ss_pred EEEcHHHHH-HHHHHHHHHHHhC
Confidence 999999999 9999999998876
No 63
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=100.00 E-value=1.9e-43 Score=316.14 Aligned_cols=174 Identities=21% Similarity=0.265 Sum_probs=158.6
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.|...+.+++|+|||++|+|| ||.+.. +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++
T Consensus 109 ~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~----~ag~P~g~v~~v~g 184 (451)
T cd07150 109 PGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIME----EAGLPKGVFNVVTG 184 (451)
T ss_pred CCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHH----HhCCCcCcEEEeeC
Confidence 345567889999999999999 996554 789999999999999999999999999888875 78999 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
..+..+.|..|+++|+|.||||+.+|+.++++++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|++
T Consensus 185 ~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a 264 (451)
T cd07150 185 GGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMS 264 (451)
T ss_pred CCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCC
Confidence 4556677777999999999999999999987764 6899999999999999999999999999999999 99999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++|+|||+++|| +|++.|++++++.
T Consensus 265 ~~rv~V~~~i~~-~f~~~l~~~~~~~ 289 (451)
T cd07150 265 ASRIIVEEPVYD-EFVKKFVARASKL 289 (451)
T ss_pred CeeEEEcHHHHH-HHHHHHHHHHHhc
Confidence 999999999999 9999999999876
No 64
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=100.00 E-value=1.7e-43 Score=320.16 Aligned_cols=168 Identities=22% Similarity=0.265 Sum_probs=151.9
Q ss_pred eeEEEeecceeEEEEeCC-CCch-hHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc-h
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDS-LPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR-E 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~-~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~-~ 88 (191)
..+.+++|+|||++|+|| ||.. +..++++||++||+||+|||+.+|.++..+.+++++ ++| |+++++++. +
T Consensus 102 ~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~-----~lp~~~v~vv~g~~~ 176 (493)
T PTZ00381 102 KSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTK-----YLDPSYVRVIEGGVE 176 (493)
T ss_pred ceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-----hCCcCEEEEecCCHH
Confidence 356789999999999999 9944 457899999999999999999999999999999864 388 999999964 4
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
....++. |+ +|+|+||||+++|+.|+++++ .+|+++|+|||||+||++|||++.|++.+++++| |+||.|++++|
T Consensus 177 ~~~~l~~-~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~~naGQ~C~A~~~ 254 (493)
T PTZ00381 177 VTTELLK-EP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDY 254 (493)
T ss_pred HHHHHHh-CC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhhcCCcCCCCCE
Confidence 3445554 66 999999999999999998764 6999999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||++++| +|++.|++++++.
T Consensus 255 vlV~~~i~d-~f~~~l~~~~~~~ 276 (493)
T PTZ00381 255 VLVHRSIKD-KFIEALKEAIKEF 276 (493)
T ss_pred EEEeHHHHH-HHHHHHHHHHHHH
Confidence 999999999 9999999988765
No 65
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=100.00 E-value=1.8e-43 Score=320.50 Aligned_cols=173 Identities=17% Similarity=0.196 Sum_probs=157.7
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+..++|+|||++|+|| ||.... +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++
T Consensus 145 ~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----eaGlP~gvv~~v~g~ 220 (500)
T cd07083 145 GEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFH----EAGFPPGVVQFLPGV 220 (500)
T ss_pred CceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHH----HcCCCCCceEEEeCC
Confidence 44566789999999999999 995554 789999999999999999999999999998875 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--C------CcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--H------IPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYP 157 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~------~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~G 157 (191)
+.+..+.|..||++|+|.||||+.+|+.+++.++ . +|+++|+|||||+||++|||+|.|++.+++|+| ++|
T Consensus 221 ~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~G 300 (500)
T cd07083 221 GEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQG 300 (500)
T ss_pred CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcC
Confidence 4556677777999999999999999999987764 2 899999999999999999999999999999999 999
Q ss_pred CccccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 158 AACNAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 158 Q~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|.|++++|+|||+++|| +|++.|++++++.
T Consensus 301 Q~C~a~~rv~V~~~i~d-~f~~~l~~~~~~~ 330 (500)
T cd07083 301 QKCSAASRLILTQGAYE-PVLERLLKRAERL 330 (500)
T ss_pred CCCCCCeeEEEcHHHHH-HHHHHHHHHHHcC
Confidence 99999999999999999 9999999998775
No 66
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=100.00 E-value=2.1e-43 Score=317.10 Aligned_cols=174 Identities=20% Similarity=0.218 Sum_probs=159.1
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+..++|+|||++|+|| ||.... +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++
T Consensus 114 ~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~----~aglP~g~~~~v~g~ 189 (459)
T cd07089 114 PGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIA----ETDLPAGVVNVVTGS 189 (459)
T ss_pred CceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HcCCCccceEEEecC
Confidence 44567899999999999999 995554 789999999999999999999999999988876 69999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
..+..+.|..||++++|.||||+.+|+.++++++ .+|+++|+|||||+||++|||++.|++.+++++| ++||.|+++
T Consensus 190 ~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~ 269 (459)
T cd07089 190 DNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALT 269 (459)
T ss_pred cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCC
Confidence 4556677777999999999999999999998764 5899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhcC
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~g 189 (191)
+|+|||+++|| +|+++|++++++..
T Consensus 270 ~~v~V~~~v~~-~f~~~l~~~~~~~~ 294 (459)
T cd07089 270 TRLLVPRSRYD-EVVEALAAAFEALP 294 (459)
T ss_pred eEEEEcHHHHH-HHHHHHHHHHHhCC
Confidence 99999999999 99999999998763
No 67
>KOG2450|consensus
Probab=100.00 E-value=3.2e-44 Score=317.36 Aligned_cols=174 Identities=20% Similarity=0.212 Sum_probs=162.7
Q ss_pred cCCeeeEEEeecceeEEEEeCC-CC-chhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEec
Q psy18173 9 ADGLSLSQVTVPIGVLLVIFES-RP-DSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVS 85 (191)
Q Consensus 9 ~~g~~~~~~~~PlGvv~~I~p~-~P-~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~ 85 (191)
+.+...++.++|+|||+.|+|| || .+..|++++||++||++|+||++++|+|+..++++++ ++|+| |++|+++
T Consensus 147 ~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~----eaG~P~GVvNii~ 222 (501)
T KOG2450|consen 147 DGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCK----EAGFPPGVVNIVP 222 (501)
T ss_pred CCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhH----HhcCCcceEEEcc
Confidence 4455688999999999999999 99 5555999999999999999999999999999999987 79999 9999999
Q ss_pred C-chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcc
Q psy18173 86 T-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAAC 160 (191)
Q Consensus 86 ~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C 160 (191)
| +..+++.|.+||+|+.|.||||+++|+.|++.++ .||+.+|+|||+|.||.+|||+++|++.+..+-| |.||.|
T Consensus 223 G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C 302 (501)
T KOG2450|consen 223 GSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCC 302 (501)
T ss_pred CCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhccccccc
Confidence 7 6778888899999999999999999999998875 6999999999999999999999999999999999 999999
Q ss_pred ccCceEEEecCcCCcchHHHHHHHHHh
Q psy18173 161 NAMETLLIHEDHFQGSFFTDVCKMFRD 187 (191)
Q Consensus 161 ~s~~~v~V~~~i~~~~f~~~l~~~~~~ 187 (191)
++..|+|||++||| +|+++++++.++
T Consensus 303 ~a~sR~~Vqe~iyd-efv~~~v~~a~~ 328 (501)
T KOG2450|consen 303 TAGSRVFVQESIYD-EFVEKFVAAAKK 328 (501)
T ss_pred ccCceeEEechHHH-HHHHHHHHHHhc
Confidence 99999999999999 999999998865
No 68
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=100.00 E-value=3.3e-43 Score=314.52 Aligned_cols=173 Identities=20% Similarity=0.173 Sum_probs=157.7
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+++|.++..+++++++ ++| |++|++++.
T Consensus 105 ~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~-----~lP~g~~~~v~g~ 179 (446)
T cd07106 105 TRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQE-----VLPPGVLNVVSGG 179 (446)
T ss_pred CceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHH-----hCCcCeEEEeeCC
Confidence 44567889999999999999 995555 6899999999999999999999999999999874 389 999999974
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
.+..+.|..|+++|+|+||||+++|+.|++.++ .+|+++|+|||||+||++|||+++|++.+++|+| ++||.|++++
T Consensus 180 ~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~ 259 (446)
T cd07106 180 DELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIK 259 (446)
T ss_pred hhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 446677777999999999999999999998764 6899999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhcC
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~g 189 (191)
|||||+++|| +|+++|++++++..
T Consensus 260 rv~V~~~v~d-~f~~~l~~~~~~~~ 283 (446)
T cd07106 260 RLYVHESIYD-EFCEALVALAKAAV 283 (446)
T ss_pred EEEEccccHH-HHHHHHHHHHHhcC
Confidence 9999999999 99999999998763
No 69
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=100.00 E-value=2.4e-43 Score=316.55 Aligned_cols=174 Identities=19% Similarity=0.158 Sum_probs=157.8
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+..|+|+|||++|+|| ||.... +++++||++||+||+|||+.+|.++..++++++++ +|+| |++|++++
T Consensus 108 ~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~~a---ag~P~g~~~~v~g~ 184 (455)
T cd07120 108 GSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEI---PSLPAGVVNLFTES 184 (455)
T ss_pred CceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHHHh---cCCCccceEEEecC
Confidence 34567889999999999999 995544 68999999999999999999999999999888632 7999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
..+..+.|..||++++|.||||+++|+.+++.++ .+|+++|+|||||+||++|||+|.|++.+++++| ++||.|+++
T Consensus 185 ~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~ 264 (455)
T cd07120 185 GSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAG 264 (455)
T ss_pred chhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4556666667999999999999999999988764 6899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+|||+++|| +|+++|++++++.
T Consensus 265 ~rv~V~~~i~~-~f~~~l~~~~~~l 288 (455)
T cd07120 265 SRVLVQRSIAD-EVRDRLAARLAAV 288 (455)
T ss_pred eEEEEcHHHHH-HHHHHHHHHHHhc
Confidence 99999999999 9999999998876
No 70
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=100.00 E-value=2.6e-43 Score=316.71 Aligned_cols=173 Identities=23% Similarity=0.323 Sum_probs=158.0
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+.+++|+|||++|+|| ||.++. .++++||++||+||+|||+.+|.++..++++++ ++|+| |++|++++
T Consensus 124 ~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~----~aglP~gvv~~v~g~ 199 (468)
T cd07088 124 NENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVD----EAGLPAGVLNIVTGR 199 (468)
T ss_pred cceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HcCcCccceEEEecC
Confidence 44567789999999999999 996665 689999999999999999999999999988875 69999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
.++..+.|..||++|+|.||||+.+|++++++++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|+++
T Consensus 200 ~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~ 279 (468)
T cd07088 200 GSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCA 279 (468)
T ss_pred chHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCC
Confidence 4556676777999999999999999999988764 6899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+|||+++|| +|++.|++++++.
T Consensus 280 ~rv~V~~~i~d-~f~~~l~~~~~~~ 303 (468)
T cd07088 280 ERVYVHEDIYD-EFMEKLVEKMKAV 303 (468)
T ss_pred eEEEEcHHHHH-HHHHHHHHHHHhc
Confidence 99999999999 9999999998875
No 71
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=100.00 E-value=3.9e-43 Score=314.81 Aligned_cols=174 Identities=24% Similarity=0.277 Sum_probs=158.9
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+..++|+|||++|+|| ||.... +++++||++||+||+|||+.+|+++..+.++++ ++|+| |++|++++
T Consensus 111 ~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~----~aglP~g~v~~v~g~ 186 (451)
T cd07146 111 ARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLY----EAGLPPDMLSVVTGE 186 (451)
T ss_pred CceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHH----HcCcCccceEEEecC
Confidence 44566789999999999999 995554 689999999999999999999999998888765 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
..++.+.|..||++|+|.||||+.+++.+++.++.+|+++|+|||||+||++|||++.|++.+++++| ++||.|++++|
T Consensus 187 ~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~r 266 (451)
T cd07146 187 PGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKR 266 (451)
T ss_pred chHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhcCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCce
Confidence 45566777779999999999999999999988878899999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhcC
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~g 189 (191)
+|||+++|| +|++.|++++++..
T Consensus 267 v~V~~~i~d-~f~~~l~~~~~~l~ 289 (451)
T cd07146 267 ILVHESVAD-EFVDLLVEKSAALV 289 (451)
T ss_pred EEEchHHHH-HHHHHHHHHHhcCC
Confidence 999999999 99999999998763
No 72
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=100.00 E-value=2.9e-43 Score=315.05 Aligned_cols=174 Identities=22% Similarity=0.288 Sum_probs=156.9
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.|...+.+++|+|||++|+|| ||.++ ..++++||++||+||+|||+.+|.++..++++++ ++|+| |++|++++
T Consensus 106 ~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~----~aGlP~g~~~~v~g 181 (452)
T cd07102 106 DGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFA----EAGLPEGVFQVLHL 181 (452)
T ss_pred CCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----hcCCCcCcEEEEeC
Confidence 455567789999999999999 99654 4689999999999999999999999988877765 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
..+..+.|..||++|+|.||||+++|++|+++++ .+|+.+|+|||||+||++|||+|.|++.+++|+| ++||.|+++
T Consensus 182 ~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~ 261 (452)
T cd07102 182 SHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSI 261 (452)
T ss_pred CchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCC
Confidence 3355565666999999999999999999998764 5899999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+|||+++|| +|+++|++++++.
T Consensus 262 ~~v~V~~~v~~-~f~~~L~~~~~~l 285 (452)
T cd07102 262 ERIYVHESIYD-AFVEAFVAVVKGY 285 (452)
T ss_pred cEEEEeHHHHH-HHHHHHHHHHHhc
Confidence 99999999999 9999999998875
No 73
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=100.00 E-value=2.8e-43 Score=320.03 Aligned_cols=173 Identities=18% Similarity=0.228 Sum_probs=157.5
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+.+++|+|||++|+|| ||..++ +++++||++||+||+|||+.+|+++..+++++. ++|+| |++|++++
T Consensus 158 ~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----~aGlP~gvv~vv~g~ 233 (511)
T TIGR01237 158 GETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILI----EAGLPPGVFQFVPGK 233 (511)
T ss_pred CceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HhCCCCCcEEEccCC
Confidence 44566789999999999999 996555 689999999999999999999999999988765 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--------CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--------HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYP 157 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--------~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~G 157 (191)
..+.++.|..||++++|.||||+.+|+.+++.++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++|
T Consensus 234 ~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~G 313 (511)
T TIGR01237 234 GSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTG 313 (511)
T ss_pred CchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4556677777999999999999999999987653 4799999999999999999999999999999999 999
Q ss_pred CccccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 158 AACNAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 158 Q~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|.|++++|+|||+++|| +|+++|++++++.
T Consensus 314 Q~C~a~~rv~V~~~i~d-~f~~~L~~~~~~l 343 (511)
T TIGR01237 314 QKCSACSRVVVLSPVYD-AVVERFVEATRSL 343 (511)
T ss_pred CCcccceEEEEehhHHH-HHHHHHHHHHHhC
Confidence 99999999999999999 9999999998876
No 74
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=100.00 E-value=3.6e-43 Score=315.12 Aligned_cols=172 Identities=19% Similarity=0.166 Sum_probs=155.7
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+++|.++..+++++.+ ++| |++|++++
T Consensus 107 ~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~-----~lP~gvv~~v~g~ 181 (456)
T cd07107 107 RNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELARE-----VLPPGVFNILPGD 181 (456)
T ss_pred CceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHHHH-----hCCcCcEEEEeCC
Confidence 33456789999999999999 996555 6899999999999999999999999999998863 489 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhh-c-CCCCcccc
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSK-C-DYPAACNA 162 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~-~-~~GQ~C~s 162 (191)
.++..+.|..||++++|.||||+++|++|+++++ .+|+++|+|||||+||++|||+|.|++.+++|+ | ++||.|++
T Consensus 182 ~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a 261 (456)
T cd07107 182 GATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGS 261 (456)
T ss_pred CchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcC
Confidence 4445666666999999999999999999998774 699999999999999999999999999999995 8 89999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++|+|||+++|| +|+++|++++++.
T Consensus 262 ~~rv~V~~~i~d-~f~~~l~~~~~~l 286 (456)
T cd07107 262 TSRLFVHESIYD-EVLARVVERVAAI 286 (456)
T ss_pred CcEEEEcHHHHH-HHHHHHHHHHHhC
Confidence 999999999999 9999999998875
No 75
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=100.00 E-value=3.3e-43 Score=319.60 Aligned_cols=173 Identities=21% Similarity=0.303 Sum_probs=158.4
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+.+++|+|||++|+|| ||.++. +++++||++||+||+|||+.+|+++..+++++. ++|+| |++|++++
T Consensus 157 ~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----~aGlP~gvv~vv~g~ 232 (512)
T cd07124 157 GEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILE----EAGLPPGVVNFLPGP 232 (512)
T ss_pred CceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHH----HhCcCCCceEEeccC
Confidence 44567889999999999999 996665 689999999999999999999999999888775 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--------CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--------HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYP 157 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--------~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~G 157 (191)
..+..+.|..||++|+|.||||+++|+.+++.++ .+|+++|+|||||+||++|||+|.|++.+++++| ++|
T Consensus 233 ~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~G 312 (512)
T cd07124 233 GEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQG 312 (512)
T ss_pred chHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCC
Confidence 5556777777999999999999999999987653 5799999999999999999999999999999999 999
Q ss_pred CccccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 158 AACNAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 158 Q~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|.|++++|+|||+++|| +|++.|++++++.
T Consensus 313 Q~C~a~~rv~V~~~i~~-~f~~~l~~~~~~~ 342 (512)
T cd07124 313 QKCSACSRVIVHESVYD-EFLERLVERTKAL 342 (512)
T ss_pred CccccceEEEEcHHHHH-HHHHHHHHHHHhC
Confidence 99999999999999999 9999999999876
No 76
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=100.00 E-value=4e-43 Score=316.59 Aligned_cols=170 Identities=19% Similarity=0.223 Sum_probs=156.0
Q ss_pred eeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-ch
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-RE 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~ 88 (191)
..+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..+++++.+ ++| |++|++++ ..
T Consensus 129 ~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~-----~lP~g~~~~v~g~~~ 203 (475)
T cd07117 129 LSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQD-----VLPKGVVNIVTGKGS 203 (475)
T ss_pred eeEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHH-----hCCcCcEEEEecCcH
Confidence 456789999999999999 995554 7999999999999999999999999999999863 499 99999996 55
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
+..+.|..||++|+|.||||+.+|+.++++++ .+|+++|+|||||+||++|||++.|++.+++|+| |+||.|++++|
T Consensus 204 ~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~r 283 (475)
T cd07117 204 KSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSR 283 (475)
T ss_pred HHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeE
Confidence 56676677999999999999999999988764 6999999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||++++| +|++.|++++++.
T Consensus 284 v~V~~~i~d-~f~~~l~~~~~~l 305 (475)
T cd07117 284 IFVQEGIYD-EFVAKLKEKFENV 305 (475)
T ss_pred EEEeHHHHH-HHHHHHHHHHHhc
Confidence 999999999 9999999998876
No 77
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=100.00 E-value=3.7e-43 Score=315.19 Aligned_cols=175 Identities=18% Similarity=0.186 Sum_probs=159.9
Q ss_pred eeEEEeecceeEEEEeCC-CCchh--H-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSL--P-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~--~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
..+.+++|+|||++|+|| ||... . +++++||++||+||+|||+.+|+++..+++++.++|.++|+| |++|++++
T Consensus 98 ~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gvv~~v~g~ 177 (454)
T cd07129 98 DLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGG 177 (454)
T ss_pred cceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhheEEeeCC
Confidence 346789999999999999 99544 2 578999999999999999999999999999999999999999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC----CCcEEEecCccCeEEEcCCC---CHHHHHHHHHHhhc-CCCC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ----HIPVLGHAEGICHVYVDKDA---DIRKAIKIARDSKC-DYPA 158 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~----~~~~~~e~gG~n~~iV~~da---dl~~aa~~iv~~~~-~~GQ 158 (191)
..+..+.|..||++++|.||||+.+|+.+++.++ .+|+++|+|||||+||++|| |+|.|++.+++|+| |+||
T Consensus 178 ~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl~~aa~~i~~~~~~~~GQ 257 (454)
T cd07129 178 GREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQ 257 (454)
T ss_pred cHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHHHHHHHHHHHHHhcCCCC
Confidence 4345555566999999999999999999988654 58999999999999999999 89999999999999 9999
Q ss_pred ccccCceEEEecC-cCCcchHHHHHHHHHhc
Q psy18173 159 ACNAMETLLIHED-HFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 159 ~C~s~~~v~V~~~-i~~~~f~~~l~~~~~~~ 188 (191)
.|++++|+|||++ +|| +|+++|++++++.
T Consensus 258 ~C~a~~rv~v~~~~i~d-~f~~~l~~~~~~~ 287 (454)
T cd07129 258 FCTNPGLVLVPAGPAGD-AFIAALAEALAAA 287 (454)
T ss_pred eecCCceEEEeCcccHH-HHHHHHHHHHhcc
Confidence 9999999999999 999 9999999998875
No 78
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=100.00 E-value=3.3e-43 Score=317.44 Aligned_cols=174 Identities=21% Similarity=0.224 Sum_probs=158.7
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.+...+.+++|+|||++|+|| ||...+ +++++||++||+||+|||+.+|.++..+++++.+ + +| |++|++++
T Consensus 126 ~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~-lP~gvv~~v~g 200 (480)
T cd07559 126 EDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGD----L-LPKGVVNVVTG 200 (480)
T ss_pred CCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHH----h-CCcCeEEEEec
Confidence 344567889999999999999 995555 7899999999999999999999999999998864 3 89 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCC-----CHHHHHHHHHHhhc-CCC
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDA-----DIRKAIKIARDSKC-DYP 157 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~da-----dl~~aa~~iv~~~~-~~G 157 (191)
..+..+.|..||++|+|.||||+++|++|++.++ .+|+++|+|||||+||++|| |+|.|++.+++++| ++|
T Consensus 201 ~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~G 280 (480)
T cd07559 201 FGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQG 280 (480)
T ss_pred CchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCC
Confidence 5567777777999999999999999999998775 69999999999999999999 99999999999999 999
Q ss_pred CccccCceEEEecCcCCcchHHHHHHHHHhcC
Q psy18173 158 AACNAMETLLIHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 158 Q~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~g 189 (191)
|.|++++|+|||+++|| +|++.|++++++..
T Consensus 281 Q~C~a~~rv~V~~~i~d-~f~~~l~~~~~~l~ 311 (480)
T cd07559 281 EVCTCPSRALVQESIYD-EFIERAVERFEAIK 311 (480)
T ss_pred CCCCCCeEEEEcHHHHH-HHHHHHHHHHHhCC
Confidence 99999999999999999 99999999998763
No 79
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=100.00 E-value=3e-43 Score=320.61 Aligned_cols=172 Identities=16% Similarity=0.172 Sum_probs=155.3
Q ss_pred CeeeEEEeecc-eeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 11 GLSLSQVTVPI-GVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 11 g~~~~~~~~Pl-Gvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
+...+..++|+ |||++|+|| ||.+.. +++++|| +||+||+|||+++|+++..+++++. ++|+| |++|++++
T Consensus 160 ~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~----~aGlP~gvv~vv~g 234 (522)
T cd07123 160 GVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILE----EAGLPPGVINFVPG 234 (522)
T ss_pred CceeEEEEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHH----HcCcCCCcEEEEec
Confidence 34457789999 999999999 995444 6888999 6999999999999999999988775 79999 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CC------cEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CC
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HI------PVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DY 156 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~------~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~ 156 (191)
+++.++.|..||++++|.||||+++|+.|++.++ .+ |+++|+|||||+||++|||+|+|++.+++|+| ++
T Consensus 235 ~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~a 314 (522)
T cd07123 235 DGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQ 314 (522)
T ss_pred CchHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcC
Confidence 5556777777999999999999999999988764 33 89999999999999999999999999999999 99
Q ss_pred CCccccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 157 PAACNAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 157 GQ~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
||.|++++|+|||+++|| +|+++|++++++.
T Consensus 315 GQ~C~a~~rv~V~~~i~d-~f~~~l~~~~~~l 345 (522)
T cd07123 315 GQKCSAASRAYVPESLWP-EVKERLLEELKEI 345 (522)
T ss_pred CCCCCCCcEEEEcHHHHH-HHHHHHHHHHhhC
Confidence 999999999999999999 9999999999875
No 80
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=100.00 E-value=3.3e-43 Score=319.82 Aligned_cols=173 Identities=21% Similarity=0.293 Sum_probs=157.9
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
|...+.+++|+|||++|+|| ||..++ +++++||++||+||+|||+.+|+++..+++++. ++|+| |++|++++
T Consensus 162 g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~----~aGlP~gvv~vv~g~ 237 (514)
T PRK03137 162 GEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLE----EAGLPAGVVNFVPGS 237 (514)
T ss_pred CceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HhCCCCCcEEEeecC
Confidence 44567789999999999999 996665 689999999999999999999999999888775 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--------CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--------HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYP 157 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--------~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~G 157 (191)
..+..+.|..||++++|.||||+.+|+.+++.++ .+|+++|+|||||+||++|||+|.|++.+++++| ++|
T Consensus 238 ~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~G 317 (514)
T PRK03137 238 GSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSG 317 (514)
T ss_pred chHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCC
Confidence 4556676777999999999999999999988764 4799999999999999999999999999999999 999
Q ss_pred CccccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 158 AACNAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 158 Q~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|.|++++|+|||+++|| +|+++|++++++.
T Consensus 318 Q~C~a~~rv~V~~~v~d-~f~~~l~~~~~~l 347 (514)
T PRK03137 318 QKCSACSRAIVHEDVYD-EVLEKVVELTKEL 347 (514)
T ss_pred CCCccCeEEEEeHHHHH-HHHHHHHHHHHhC
Confidence 99999999999999999 9999999998865
No 81
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=100.00 E-value=5e-43 Score=314.09 Aligned_cols=169 Identities=21% Similarity=0.215 Sum_probs=153.2
Q ss_pred eeEEEeecceeEEEEeCC-CCch-hHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-ch
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDS-LPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-RE 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~-~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~ 88 (191)
..+.+++|+|||++|+|| ||.. ..+++++||++||+||+|||+.+|.++..+.+++. ++|+| |++|++++ ..
T Consensus 111 ~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~~~ 186 (454)
T cd07101 111 RTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLI----EAGLPRDLWQVVTGPGS 186 (454)
T ss_pred eEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHH----HcCcCCCcEEEEeCCcH
Confidence 457789999999999999 9944 45789999999999999999999999999988875 79999 99999996 45
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
+..+.|..| ++.|.||||+++|++|++.++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|++++|
T Consensus 187 ~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~r 264 (454)
T cd07101 187 EVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIER 264 (454)
T ss_pred HHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeE
Confidence 555655545 688999999999999998765 6999999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||+++|| +|+++|++++++.
T Consensus 265 v~V~~~i~d-~f~~~L~~~~~~~ 286 (454)
T cd07101 265 IYVHESVYD-EFVRRFVARTRAL 286 (454)
T ss_pred EEEcHHHHH-HHHHHHHHHHhhC
Confidence 999999999 9999999998875
No 82
>KOG2451|consensus
Probab=100.00 E-value=2.2e-43 Score=302.84 Aligned_cols=172 Identities=20% Similarity=0.283 Sum_probs=157.3
Q ss_pred eeeEEEeecceeEEEEeCC-CC-chhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC--
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RP-DSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-- 86 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P-~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-- 86 (191)
.+....++|+||+++|+|| || .+...+.+.||++||+||+|||+.||+++..++++-. +||+| |++|+++.
T Consensus 151 rr~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~----~AGiP~Gv~NVit~~~ 226 (503)
T KOG2451|consen 151 RRLIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAE----EAGIPAGVLNVITADA 226 (503)
T ss_pred ceEEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHH----HcCCCCcceEEEecCC
Confidence 3566789999999999999 99 4445799999999999999999999999999998865 79999 99999983
Q ss_pred --chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccc
Q psy18173 87 --REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACN 161 (191)
Q Consensus 87 --~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~ 161 (191)
..+.++.|..+|+|+.|.||||+.+|+.++.+++ .|++.+|+|||.|.||++|||+|+|++..+.+|| ++||.|.
T Consensus 227 ~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCV 306 (503)
T KOG2451|consen 227 SNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCV 306 (503)
T ss_pred CChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeE
Confidence 2456777777999999999999999999998875 6889999999999999999999999999999999 9999999
Q ss_pred cCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 162 AMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 162 s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+.+|+|||++||| .|++.|.++.++.
T Consensus 307 caNR~yVh~~iyD-~Fv~~l~e~vkkl 332 (503)
T KOG2451|consen 307 CANRVYVHDSIYD-KFVSKLAEAVKKL 332 (503)
T ss_pred ecceeEEehhhHH-HHHHHHHHHHHhe
Confidence 9999999999999 9999999998875
No 83
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=100.00 E-value=5.5e-43 Score=313.14 Aligned_cols=172 Identities=19% Similarity=0.192 Sum_probs=157.4
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
...+..++|+|||++|+|| ||.++. +++++||++||+||+|||+.+|.++..+.++++ + |+| |++|++++ .
T Consensus 110 ~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~----~-glP~g~~~~v~g~~ 184 (450)
T cd07092 110 HTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAA----E-VLPPGVVNVVCGGG 184 (450)
T ss_pred ceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHH----h-cCCcccEEEeecCc
Confidence 3456789999999999999 996664 789999999999999999999999999999886 4 999 99999996 4
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
++..+.|..|+++|+|+||||+++|+++++.++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|++++
T Consensus 185 ~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~ 264 (450)
T cd07092 185 ASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAAC 264 (450)
T ss_pred hHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 546666677999999999999999999998875 6899999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhcC
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~g 189 (191)
|+|||+++|| +|++.|++++++..
T Consensus 265 ~v~V~~~i~~-~f~~~l~~~~~~~~ 288 (450)
T cd07092 265 RVYVHESVYD-EFVAALVEAVSAIR 288 (450)
T ss_pred EEEEeHHHHH-HHHHHHHHHHhhCC
Confidence 9999999999 99999999998763
No 84
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=100.00 E-value=7.6e-43 Score=312.58 Aligned_cols=173 Identities=20% Similarity=0.307 Sum_probs=159.5
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+..++|+|||++|+|| ||..+ .+++++||++||+||+|||+.+|.++..++++++ ++|+| |++|++++
T Consensus 114 ~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~----~ag~P~g~~~~v~g~ 189 (453)
T cd07094 114 NRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILV----EAGVPEGVLQVVTGE 189 (453)
T ss_pred CceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HcCCCcCcEEEEeCC
Confidence 45567789999999999999 99555 4789999999999999999999999999998886 68999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
.++..+.|..||++|.|.||||+++|++|++.+..+|+++|+|||||+||++|||+++|++.+++++| ++||.|++++|
T Consensus 190 ~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~ 269 (453)
T cd07094 190 REVLGDAFAADERVAMLSFTGSAAVGEALRANAGGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQR 269 (453)
T ss_pred CchHHHHHhcCCCCCEEEEECcHHHHHHHHHHcCCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeE
Confidence 45556777779999999999999999999998888999999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||+++|| +|+++|++++++.
T Consensus 270 i~V~~~i~d-~f~~~L~~~~~~~ 291 (453)
T cd07094 270 IYVHEELYD-EFIEAFVAAVKKL 291 (453)
T ss_pred EEEeHHHHH-HHHHHHHHHHHhc
Confidence 999999999 9999999999765
No 85
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=100.00 E-value=6.3e-43 Score=313.56 Aligned_cols=174 Identities=21% Similarity=0.212 Sum_probs=158.8
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.+...+..++|+|||++|+|| ||..+. +++++||++||+||+|||+++|.++..+++++. ++|+| |++|++++
T Consensus 109 ~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~----~aglP~~vv~~v~g 184 (457)
T cd07114 109 GDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAE----EAGFPPGVVNVVTG 184 (457)
T ss_pred CCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHH----HcCcCCCcEEEEeC
Confidence 345567789999999999999 995555 689999999999999999999999999998876 68999 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
..+..+.|..|+++++|.||||+++++++++.++ .+|+++|+|||||+||++|||++.|++.+++|+| ++||.|++
T Consensus 185 ~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a 264 (457)
T cd07114 185 FGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVA 264 (457)
T ss_pred CCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCC
Confidence 4456676777999999999999999999998765 6899999999999999999999999999999999 99999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++|+|||+++|| +|++.|++++++.
T Consensus 265 ~~~v~V~~~v~~-~f~~~l~~~~~~~ 289 (457)
T cd07114 265 GSRLLVQRSIYD-EFVERLVARARAI 289 (457)
T ss_pred CceEEEcHHHHH-HHHHHHHHHHHhC
Confidence 999999999999 9999999998765
No 86
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=100.00 E-value=6.3e-43 Score=318.20 Aligned_cols=173 Identities=22% Similarity=0.252 Sum_probs=158.5
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
|...+..++|+|||++|+|| ||.... .++++||++||+||+|||+.+|+++..+++++. ++|+| |++|++++
T Consensus 158 g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~----eaGlP~gvv~vv~g~ 233 (518)
T cd07125 158 GELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLH----EAGVPRDVLQLVPGD 233 (518)
T ss_pred CceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHH----HcCCCCCcEEEEecC
Confidence 44567789999999999999 996665 689999999999999999999999999888765 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC-----CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcc
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ-----HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAAC 160 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-----~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C 160 (191)
.++..+.|..|+++|+|+||||+++++++++.++ .+|+++|+|||||+||++|||+|+|++.+++|+| ++||.|
T Consensus 234 ~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C 313 (518)
T cd07125 234 GEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRC 313 (518)
T ss_pred chhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCC
Confidence 4546677777999999999999999999998764 6899999999999999999999999999999999 999999
Q ss_pred ccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 161 NAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 161 ~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++++|+|||+++|| +|+++|++++++.
T Consensus 314 ~a~~rv~V~~~i~d-~f~~~l~~~~~~~ 340 (518)
T cd07125 314 SALRLLYLQEEIAE-RFIEMLKGAMASL 340 (518)
T ss_pred CCCeEEEEcchhHH-HHHHHHHHHHhcC
Confidence 99999999999999 9999999999875
No 87
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=100.00 E-value=6.2e-43 Score=319.15 Aligned_cols=172 Identities=19% Similarity=0.173 Sum_probs=154.6
Q ss_pred CeeeEEEeecc-eeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 11 GLSLSQVTVPI-GVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 11 g~~~~~~~~Pl-Gvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
+...+..++|+ |||++|+|| ||.+.. +++++|| +||+||+|||+++|+++..+++++. ++|+| |++|++++
T Consensus 160 ~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~----~aGlP~gvv~vv~g 234 (533)
T TIGR01236 160 GEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILE----EAGLPPGVINFVPG 234 (533)
T ss_pred CceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHH----hcCCCCCcEEEEec
Confidence 33467789999 999999999 995444 6888999 7999999999999999999998875 79999 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CC------cEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CC
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HI------PVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DY 156 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~------~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~ 156 (191)
+.+.++.|..||++++|.||||+++|+.|++.++ .+ ++++|+|||||+||++|||+|.|++.+++|+| ++
T Consensus 235 ~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~ 314 (533)
T TIGR01236 235 DGFAVSDVVLADPRLAGIHFTGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQ 314 (533)
T ss_pred CcHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhC
Confidence 4556666667999999999999999999988764 33 49999999999999999999999999999999 99
Q ss_pred CCccccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 157 PAACNAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 157 GQ~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
||.|++++|+|||+++|| +|+++|++++++.
T Consensus 315 GQ~C~a~~rv~V~~~i~d-~f~~~l~~~~~~l 345 (533)
T TIGR01236 315 GQKCSAASRLYVPHSVWP-RFKDELLAELAEV 345 (533)
T ss_pred CCCCcCCeeEEEchhHHH-HHHHHHHHHHhcC
Confidence 999999999999999999 9999999998875
No 88
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=100.00 E-value=5.4e-43 Score=316.11 Aligned_cols=169 Identities=18% Similarity=0.187 Sum_probs=154.6
Q ss_pred EEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCchHHHH
Q psy18173 16 QVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTREEISD 92 (191)
Q Consensus 16 ~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~~~~~~ 92 (191)
..++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++..+...
T Consensus 143 ~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~ 218 (480)
T cd07111 143 AGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICA----EAGLPPGVLNIVTGNGSFGS 218 (480)
T ss_pred ccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----hcCCCcccEEEEeCCchHHH
Confidence 467999999999999 995554 789999999999999999999999999888765 79999 99999996434567
Q ss_pred HHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceEEEe
Q psy18173 93 LLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETLLIH 169 (191)
Q Consensus 93 ~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v~V~ 169 (191)
.|..||++|+|.||||+.+|+.+++.++ .+|+++|+|||||+||++|||++.|++.+++|+| ++||.|++++|+|||
T Consensus 219 ~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~ 298 (480)
T cd07111 219 ALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQ 298 (480)
T ss_pred HHhcCCCcCEEEEECCHHHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEc
Confidence 6777999999999999999999988764 6899999999999999999999999999999999 999999999999999
Q ss_pred cCcCCcchHHHHHHHHHhcC
Q psy18173 170 EDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 170 ~~i~~~~f~~~l~~~~~~~g 189 (191)
+++|| +|++.|++++++..
T Consensus 299 ~~i~d-~f~~~l~~~~~~~~ 317 (480)
T cd07111 299 ESVAE-ELIRKLKERMSHLR 317 (480)
T ss_pred HHHHH-HHHHHHHHHHHhcC
Confidence 99999 99999999988753
No 89
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=100.00 E-value=7.5e-43 Score=312.65 Aligned_cols=174 Identities=22% Similarity=0.219 Sum_probs=159.1
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.+...+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|+++..+.+++. ++|+| |++|++++
T Consensus 107 ~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~----~aglP~g~v~~v~g 182 (455)
T cd07093 107 GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELAN----EAGLPPGVVNVVHG 182 (455)
T ss_pred CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHH----hcCCCccceEEEec
Confidence 455667789999999999999 995554 789999999999999999999999999888775 79999 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
..+..+.|..|+++|+|+||||+.+++.++++++ .+|+++|+|||||+||++|||+++|++.+++++| ++||.|++
T Consensus 183 ~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a 262 (455)
T cd07093 183 FGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLA 262 (455)
T ss_pred CchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCC
Confidence 4556677777999999999999999999998775 6999999999999999999999999999999999 89999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++++|||++++| +|+++|++++++.
T Consensus 263 ~~~v~v~~~i~d-~f~~~l~~~~~~~ 287 (455)
T cd07093 263 GSRILVQRSIYD-EFLERFVERAKAL 287 (455)
T ss_pred CceEEEcHHHHH-HHHHHHHHHHHhC
Confidence 999999999999 9999999999876
No 90
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=100.00 E-value=9.5e-43 Score=314.82 Aligned_cols=171 Identities=16% Similarity=0.180 Sum_probs=153.7
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+++++|+|||++|+|| ||.+. .+++++||++||+||+|||+.+|+++..+++++. ++|+| |++|+++|
T Consensus 133 ~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~----~aGlP~gv~~vv~G~ 208 (489)
T cd07126 133 GQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLH----LCGMPATDVDLIHSD 208 (489)
T ss_pred CceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHH----HhCcCcCcEEEEeCC
Confidence 33567889999999999999 99544 5789999999999999999999999999988876 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCC-CHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDA-DIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~da-dl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
+++.+.++ .|+++|+|+||||+++|++|+..++ +++.+|+|||||+||++|| |+|.|++.+++++| |+||.|++++
T Consensus 209 ~~~~~~l~-~~~~v~~V~FTGS~~vGr~i~~~~g-~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~ 286 (489)
T cd07126 209 GPTMNKIL-LEANPRMTLFTGSSKVAERLALELH-GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQS 286 (489)
T ss_pred chhHHHHh-cCCCCCEEEEECCHHHHHHHHHHhC-CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCc
Confidence 45555555 4899999999999999999987765 6799999999999999999 99999999999999 9999999999
Q ss_pred eEEEecCc-CCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDH-FQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i-~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++ +| +|+++|++++++.
T Consensus 287 rv~V~~~i~~d-~f~~~l~~~~~~~ 310 (489)
T cd07126 287 ILFAHENWVQA-GILDKLKALAEQR 310 (489)
T ss_pred eEEEeCcchHH-HHHHHHHHHHHhc
Confidence 99999995 67 9999999988764
No 91
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=100.00 E-value=1e-42 Score=309.56 Aligned_cols=174 Identities=24% Similarity=0.260 Sum_probs=155.2
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHH-HHHHHHHHHHHHHhcCCC-CeEEEec
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHS-NKALMDVVKEALASVGAQ-DAISLVS 85 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t-~~~~~~~~~~~l~~aGlP-g~v~~l~ 85 (191)
.|...+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.+ +..+.++ +.++|+| |++|+++
T Consensus 88 ~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~----l~~aGlP~gvv~~v~ 163 (431)
T cd07104 88 PGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEI----FEEAGLPKGVLNVVP 163 (431)
T ss_pred CCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHH----HHHcCCCcccEEEee
Confidence 355567889999999999999 996555 689999999999999999999987 4455554 5589999 9999999
Q ss_pred C-chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccc
Q psy18173 86 T-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACN 161 (191)
Q Consensus 86 ~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~ 161 (191)
+ ..+..+.|..|+++|+|.||||+++++.++++++ .+|+++|+|||||+||++|||++.|++.+++|+| ++||.|+
T Consensus 164 g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~ 243 (431)
T cd07104 164 GGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICM 243 (431)
T ss_pred CCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcc
Confidence 6 4556666666999999999999999999987764 6899999999999999999999999999999999 9999999
Q ss_pred cCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 162 AMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 162 s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+++|+|||+++|| +|+++|++++++.
T Consensus 244 a~~~v~v~~~i~~-~f~~~l~~~~~~~ 269 (431)
T cd07104 244 AAGRILVHESVYD-EFVEKLVAKAKAL 269 (431)
T ss_pred cCcEEEEcHHHHH-HHHHHHHHHHHhc
Confidence 9999999999999 9999999998775
No 92
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-42 Score=332.38 Aligned_cols=171 Identities=25% Similarity=0.384 Sum_probs=154.4
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+.+++|+|||++|+|| ||..++ +++++||++||+||+|||+.+|.++..+++++++++.++|+| |++|++++
T Consensus 99 ~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g~ 178 (862)
T PRK13805 99 EFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEEP 178 (862)
T ss_pred CCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecCC
Confidence 45577889999999999999 997776 589999999999999999999999999999999999999999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
..+..+.|..||+||+|+||||+++++... ...+|+++|+|||||+||++|||+++|++.|++|+| |+||.|++++|
T Consensus 179 ~~~~~~~L~~~~~vd~I~fTGs~~v~~~a~--~~~~pv~~e~gGk~p~iV~~dADl~~Aa~~i~~~k~~n~GQ~C~a~~~ 256 (862)
T PRK13805 179 SVELTNALMNHPGIALILATGGPGMVKAAY--SSGKPALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICASEQA 256 (862)
T ss_pred CHHHHHHHHcCCCccEEEecCCHHHHHHHH--hcCCCeEEECCCCCeEEEeCCCCHHHHHHHHHHhhhccCCCccCCCce
Confidence 444445444589999999999999887653 237999999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHH
Q psy18173 166 LLIHEDHFQGSFFTDVCKM 184 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~ 184 (191)
+|||+++|| +|+++|+++
T Consensus 257 v~V~~~i~d-~f~~~l~~~ 274 (862)
T PRK13805 257 VIVDDEIYD-EVKEEFASH 274 (862)
T ss_pred EEEehhhHH-HHHHHHHHh
Confidence 999999999 999888654
No 93
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=100.00 E-value=1.1e-42 Score=311.09 Aligned_cols=174 Identities=22% Similarity=0.288 Sum_probs=158.5
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.+...+.+++|+|||++|+|| ||.++. +.+++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++
T Consensus 107 ~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~----~aglP~g~v~~v~~ 182 (451)
T cd07103 107 PGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAE----EAGLPAGVLNVVTG 182 (451)
T ss_pred CCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHH----HcCCCcccEEEEec
Confidence 345567889999999999999 996665 689999999999999999999999999998876 69999 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
..+..+.|..|+++|+|+||||+.+++.+.+.++ .+|+++|+|||||+||++|||++.|++.+++|+| ++||.|++
T Consensus 183 ~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a 262 (451)
T cd07103 183 SPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVC 262 (451)
T ss_pred CchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCC
Confidence 4456666666999999999999999999988764 6899999999999999999999999999999999 99999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++++|||++++| +|++.|++++++.
T Consensus 263 ~~~v~V~~~i~~-~f~~~l~~~~~~~ 287 (451)
T cd07103 263 ANRIYVHESIYD-EFVEKLVERVKKL 287 (451)
T ss_pred CeeEEEcHHHHH-HHHHHHHHHHHhc
Confidence 999999999999 9999999998875
No 94
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=100.00 E-value=9.7e-43 Score=312.97 Aligned_cols=173 Identities=21% Similarity=0.231 Sum_probs=157.5
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+..++|+|||++|+|| ||.... +++++||++||+||+|||+++|.++..+++++. ++|+| |++|++++
T Consensus 115 ~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~----~aGlP~g~v~~v~g~ 190 (462)
T cd07112 115 DALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELAL----EAGLPAGVLNVVPGF 190 (462)
T ss_pred CeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHH----hcCCCCCcEEEEeCC
Confidence 33456789999999999999 995554 789999999999999999999999999988765 79999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCC-CHHHHHHHHHHhhc-CCCCccc
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDA-DIRKAIKIARDSKC-DYPAACN 161 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~da-dl~~aa~~iv~~~~-~~GQ~C~ 161 (191)
..+..+.|..|+++|+|.||||+++|+.+++.++ .+|+++|+|||||+||++|| |+++|++.+++|+| ++||.|+
T Consensus 191 ~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~ 270 (462)
T cd07112 191 GHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCS 270 (462)
T ss_pred CchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCC
Confidence 4556777777999999999999999999988654 58999999999999999999 99999999999999 9999999
Q ss_pred cCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 162 AMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 162 s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+++|+|||+++|| +|++.|++++++.
T Consensus 271 a~~~v~V~~~v~~-~f~~~l~~~~~~~ 296 (462)
T cd07112 271 AGSRLLVHESIKD-EFLEKVVAAAREW 296 (462)
T ss_pred CCeeEEEcHHHHH-HHHHHHHHHHhcC
Confidence 9999999999999 9999999999865
No 95
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.6e-42 Score=310.96 Aligned_cols=173 Identities=23% Similarity=0.285 Sum_probs=156.6
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.+...+..++|+|||++|+|| ||..+. +++++||++||+||+|||+++|.++..+.+++++ ++| |++|++++
T Consensus 107 ~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~-----~lP~~~~~~v~g 181 (457)
T cd07108 107 PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQ-----VLPAGVLNVITG 181 (457)
T ss_pred CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH-----hCCcCcEEEEeC
Confidence 344556789999999999999 996665 6899999999999999999999999999999874 389 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhh-c-CCCCccc
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSK-C-DYPAACN 161 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~-~-~~GQ~C~ 161 (191)
..+..+.|..||++|+|+||||+.+++.|++.++ .+|+++|+|||||+||++|||+++|++.+++++ | ++||.|+
T Consensus 182 ~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~ 261 (457)
T cd07108 182 YGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCT 261 (457)
T ss_pred CchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCC
Confidence 4456676777999999999999999999998775 589999999999999999999999999999995 8 8999999
Q ss_pred cCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 162 AMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 162 s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+++|+|||+++|| +|+++|++++++.
T Consensus 262 a~~rv~V~~~i~~-~f~~~l~~~~~~~ 287 (457)
T cd07108 262 AGSRLFVHEDIYD-AFLEKLVAKLSKL 287 (457)
T ss_pred CCeEEEEehHHHH-HHHHHHHHHHhhC
Confidence 9999999999999 9999999998876
No 96
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=100.00 E-value=1.9e-42 Score=312.38 Aligned_cols=172 Identities=22% Similarity=0.191 Sum_probs=155.1
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+.+|.++..+++++++ + +| |++|++++
T Consensus 127 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----a-lP~gvv~~v~g~ 201 (479)
T cd07116 127 NTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGD----L-LPPGVVNVVNGF 201 (479)
T ss_pred CceEEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----H-CCcCcEEEEecC
Confidence 44567789999999999999 996665 7999999999999999999999999999999874 4 89 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCC------CCHHHHHHHHHHhhcCCCC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKD------ADIRKAIKIARDSKCDYPA 158 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~d------adl~~aa~~iv~~~~~~GQ 158 (191)
..+..+.|..||++|+|.||||+++|++|+++++ .+|+++|+|||||+||++| ||+|+|++.++++.+++||
T Consensus 202 ~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~~~~GQ 281 (479)
T cd07116 202 GLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFALNQGE 281 (479)
T ss_pred chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHHhcCCC
Confidence 4556666667999999999999999999998775 6899999999999999987 7999999999997569999
Q ss_pred ccccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 159 ACNAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 159 ~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
.|++++|+|||+++|| +|+++|++++++.
T Consensus 282 ~C~a~~rv~V~~~i~d-~f~~~l~~~~~~l 310 (479)
T cd07116 282 VCTCPSRALIQESIYD-RFMERALERVKAI 310 (479)
T ss_pred CCCCCeEEEEcHHHHH-HHHHHHHHHHHhc
Confidence 9999999999999999 9999999998874
No 97
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=100.00 E-value=2e-42 Score=309.76 Aligned_cols=172 Identities=22% Similarity=0.220 Sum_probs=154.8
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...+.+++|+|||++|+|| ||.+.. +++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++.
T Consensus 110 ~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~~l~~~l~----~ag~P~g~~~vv~g~ 185 (453)
T cd07099 110 NKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWA----AAGPPQGVLQVVTGD 185 (453)
T ss_pred CceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHH----HcCCCCCeEEEEeCC
Confidence 44567789999999999999 996555 689999999999999999999999988888775 79999 999999963
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
.+..+.+..| ++|+|.||||+++++.|+++++ .+|+++|+|||||+||++|||+++|++.+++++| ++||.|++++
T Consensus 186 ~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ 264 (453)
T cd07099 186 GATGAALIDA-GVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVE 264 (453)
T ss_pred chHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCc
Confidence 3455555545 5999999999999999998764 6899999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++|| +|++.|++++++.
T Consensus 265 ri~V~~~i~d-~f~~~l~~~~~~l 287 (453)
T cd07099 265 RVYVHESVYD-EFVARLVAKARAL 287 (453)
T ss_pred EEEEcHHHHH-HHHHHHHHHHHhc
Confidence 9999999999 9999999999876
No 98
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=100.00 E-value=4.1e-42 Score=322.57 Aligned_cols=179 Identities=59% Similarity=0.977 Sum_probs=159.6
Q ss_pred cCCeeeEEEeecceeEEEEeCCCCchhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 9 ADGLSLSQVTVPIGVLLVIFESRPDSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 9 ~~g~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
.++...+.+++|+|||++|+||+|..+.+++++||++||+||+|||+.+|+++..++++++++|. .|.| ++++++++.
T Consensus 386 ~~~~~~~~~~~P~GVV~~I~PwNP~~~~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~alp-~g~~~~~~~~v~~~ 464 (715)
T TIGR01092 386 ADNLILEKTSVPIGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEAIP-IHVGKKLIGLVTSR 464 (715)
T ss_pred CCCceeEEEEeeceEEEEEeCCChHHHHHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHHcC-CCCCCcEEEEeCCh
Confidence 34555677899999999999999966678899999999999999999999999999999987643 3444 689999865
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhcCCCCccccCceEE
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKCDYPAACNAMETLL 167 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~~~GQ~C~s~~~v~ 167 (191)
++++++|..||+||+|+||||+++|+.|++.+. +|+.+|+|||||+||++|||++.|++.+++++|++||.|++++|+|
T Consensus 465 ~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~-~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~GQ~C~a~~rvl 543 (715)
T TIGR01092 465 EEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK-IPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDYPAACNAMETLL 543 (715)
T ss_pred HHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC-CCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCCCCccccCcEEE
Confidence 667888888999999999999999999998875 9999999999999999999999999888888887799999999999
Q ss_pred EecCcCCcc-hHHHHHHHHHhcCC
Q psy18173 168 IHEDHFQGS-FFTDVCKMFRDEGV 190 (191)
Q Consensus 168 V~~~i~~~~-f~~~l~~~~~~~g~ 190 (191)
||+++|| + +++.+.+.+.+.|.
T Consensus 544 V~~~i~d-~~~~~~~v~~~~~~Ga 566 (715)
T TIGR01092 544 VHKDLLR-NGLLDDLIDMLRTEGV 566 (715)
T ss_pred Eehhhcc-chhHHHHHHHHHHCCC
Confidence 9999999 6 78888888887775
No 99
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=100.00 E-value=2e-42 Score=310.09 Aligned_cols=170 Identities=24% Similarity=0.275 Sum_probs=152.9
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...+..++|+|||++|+|| ||.+.. +++++||++||+||+|||+.+|.++..+++++++ + +| |++|++++.
T Consensus 91 ~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~----a-lP~gv~~~v~g~ 165 (449)
T cd07136 91 PSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEE----T-FDEEYVAVVEGG 165 (449)
T ss_pred CceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHH----h-CCCCEEEEEeCC
Confidence 33467789999999999999 995555 6899999999999999999999999999998864 4 89 999999963
Q ss_pred -hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 88 -EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 88 -~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
+....++ .|+ +|+|.||||+++|+.|++.++ .+|+++|+|||||+||++|||+|.|++.+++++| ++||.|+++
T Consensus 166 ~~~~~~L~-~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~ 243 (449)
T cd07136 166 VEENQELL-DQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAP 243 (449)
T ss_pred hHHHHHHh-cCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCcccCC
Confidence 4444455 455 999999999999999988764 6999999999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+|||+++|| +|++.|++++++.
T Consensus 244 ~rv~V~~~i~d-~f~~~L~~~~~~~ 267 (449)
T cd07136 244 DYVLVHESVKE-KFIKELKEEIKKF 267 (449)
T ss_pred CEEEEcHHHHH-HHHHHHHHHHHHh
Confidence 99999999999 9999999998875
No 100
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=100.00 E-value=2.3e-42 Score=308.51 Aligned_cols=169 Identities=20% Similarity=0.246 Sum_probs=153.2
Q ss_pred eeEEEeecceeEEEEeCC-CCc-hhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCchH
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPD-SLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTREE 89 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~~~ 89 (191)
..+.+++|+|||++|+|| ||. ...+++++||++||+||+|||+.+|.++..+++++++ + +| |++|++++..+
T Consensus 94 ~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~----a-lP~g~~~~v~g~~~ 168 (434)
T cd07133 94 KAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAE----Y-FDEDEVAVVTGGAD 168 (434)
T ss_pred ceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----h-CCcCeEEEEeCChH
Confidence 457789999999999999 995 4557999999999999999999999999999988864 3 89 99999997544
Q ss_pred HHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceE
Q psy18173 90 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETL 166 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v 166 (191)
.++.|..|+ +|.|.||||+++|+++++.++ .+|+++|+|||||+||++|||++.|++.+++++| ++||.|++++|+
T Consensus 169 ~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv 247 (434)
T cd07133 169 VAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYV 247 (434)
T ss_pred HHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCcccCCCEE
Confidence 566666555 999999999999999998764 6899999999999999999999999999999999 999999999999
Q ss_pred EEecCcCCcchHHHHHHHHHhc
Q psy18173 167 LIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 167 ~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|||+++|| +|++.|++++++.
T Consensus 248 ~V~~~i~~-~f~~~l~~~~~~~ 268 (434)
T cd07133 248 LVPEDKLE-EFVAAAKAAVAKM 268 (434)
T ss_pred EEcHHHHH-HHHHHHHHHHHHh
Confidence 99999999 9999999998765
No 101
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=3.6e-42 Score=307.80 Aligned_cols=172 Identities=23% Similarity=0.302 Sum_probs=158.0
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
...+.+++|+|||++|+|| ||...+ +++++||++||+||+|||+.+|.++..+.++++ ++|+| |++|++++ .
T Consensus 115 ~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~----~ag~P~gvv~~v~g~~ 190 (453)
T cd07149 115 RIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLL----EAGLPKGALNVVTGSG 190 (453)
T ss_pred eeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HcCcCccceEEeecCc
Confidence 3456789999999999999 996554 689999999999999999999999999988876 68999 99999996 4
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceE
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETL 166 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v 166 (191)
++..+.|..||++|+|+||||+++++.+++++..+|+++|+|||||+||++|||++.|++.+++++| ++||.|++++|+
T Consensus 191 ~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v 270 (453)
T cd07149 191 ETVGDALVTDPRVRMISFTGSPAVGEAIARKAGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRI 270 (453)
T ss_pred hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcCCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceE
Confidence 5556666769999999999999999999988877899999999999999999999999999999999 999999999999
Q ss_pred EEecCcCCcchHHHHHHHHHhc
Q psy18173 167 LIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 167 ~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|||+++|| +|++.|++++++.
T Consensus 271 ~V~~~i~d-~f~~~L~~~~~~~ 291 (453)
T cd07149 271 FVHEDIYD-EFLERFVAATKKL 291 (453)
T ss_pred EEcHhHHH-HHHHHHHHHHHhC
Confidence 99999999 9999999998876
No 102
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=3e-42 Score=314.13 Aligned_cols=170 Identities=22% Similarity=0.238 Sum_probs=153.8
Q ss_pred eeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R 87 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~ 87 (191)
...+..++|+|||++|+|| ||... .+++++||++||+||+|||+.+|.++..++++++ ++|+| |++|++++ .
T Consensus 146 ~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~----eaGlP~gvv~~v~g~~ 221 (524)
T PRK09407 146 TKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLY----EAGLPRDLWQVVTGPG 221 (524)
T ss_pred ceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHH----HcCCCcccEEEEecCC
Confidence 3467789999999999999 99554 4789999999999999999999999999998875 79999 99999996 4
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
.+..+.|..| +|.|.||||+++|++|+++++ .+|+++|+|||||+||++|||+++|++.+++|+| ++||.|++++
T Consensus 222 ~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~ 299 (524)
T PRK09407 222 PVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIE 299 (524)
T ss_pred chHHHHHHhc--CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCc
Confidence 4455655544 789999999999999998775 6899999999999999999999999999999999 8999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++|| +|++.|++++++.
T Consensus 300 rv~V~~~v~d-~f~~~L~~~~~~l 322 (524)
T PRK09407 300 RIYVHESIYD-EFVRAFVAAVRAM 322 (524)
T ss_pred EEEEcHHHHH-HHHHHHHHHHHhc
Confidence 9999999999 9999999999876
No 103
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=100.00 E-value=5.4e-42 Score=321.62 Aligned_cols=176 Identities=57% Similarity=0.915 Sum_probs=157.0
Q ss_pred cCCeeeEEEeecceeEEEEeCCCCchhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-C----eEEE
Q psy18173 9 ADGLSLSQVTVPIGVLLVIFESRPDSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-D----AISL 83 (191)
Q Consensus 9 ~~g~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g----~v~~ 83 (191)
+++...+.+++|+|||++|+||+|..+++++++||++||+||+|||+.||+++..+++++.+ + +| | ++|+
T Consensus 394 ~~~~~~~~~r~PlGVV~~I~PwnP~~~~~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~e----A-lP~gv~~~v~nv 468 (718)
T PLN02418 394 ADGLVLEKTSCPLGVLLIIFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITD----A-IPKTVGGKLIGL 468 (718)
T ss_pred CCCceEEEEEEeeeEEEEEeCCCcHHHHHHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHH----H-ccccCCcceEEE
Confidence 34555678899999999999999977778999999999999999999999999999999875 5 66 6 5999
Q ss_pred ecCchHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhcCCCCccccC
Q psy18173 84 VSTREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKCDYPAACNAM 163 (191)
Q Consensus 84 l~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~~~GQ~C~s~ 163 (191)
+++..+++++|..||++++|.||||+..+++++... .+|+++|+|||||+||++|||+|+|++.+++|+|.+||.|++.
T Consensus 469 v~g~~~~g~~L~~~~~v~~V~FTGSt~~i~~~aa~~-~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~nGQ~C~a~ 547 (718)
T PLN02418 469 VTSRDEIPDLLKLDDVIDLVIPRGSNKLVSQIKAST-KIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDYPAACNAM 547 (718)
T ss_pred eCCcHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHhc-CCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCCCCccccC
Confidence 997556778888899999999999999888776544 6999999999999999999999999999999999339999999
Q ss_pred ceEEEecCcCCcc-hHHHHHHHHHhcCCC
Q psy18173 164 ETLLIHEDHFQGS-FFTDVCKMFRDEGVN 191 (191)
Q Consensus 164 ~~v~V~~~i~~~~-f~~~l~~~~~~~g~~ 191 (191)
+|+|||+++|| + .+..+++...++|++
T Consensus 548 ~RllVh~~i~d-~G~~~~~i~~a~~~Ga~ 575 (718)
T PLN02418 548 ETLLVHKDLVQ-NGGLNDLLVALRSAGVT 575 (718)
T ss_pred cEEEEeccccc-cccHHHHHHHHHHCCCE
Confidence 99999999999 8 778888888888863
No 104
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=100.00 E-value=4.1e-42 Score=310.00 Aligned_cols=172 Identities=18% Similarity=0.218 Sum_probs=154.7
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...+.+++|+|||++|+|| ||..+. +++++||++||+||+|||+++|.++..+.+++. ++|+| |++|++++.
T Consensus 127 ~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~----~aglP~g~~~~v~g~ 202 (477)
T TIGR01722 127 RVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFS----EAGAPDGVLNVVHGD 202 (477)
T ss_pred CceEEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHH----HhCcCCCeEEEEeCC
Confidence 44566789999999999999 996665 789999999999999999999999998877665 79999 999999964
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
.+..+.|..||++++|.||||+.+++.+++.++ .+|+++|+|||||+||++|||+|.|++.+++++| ++||.|++++
T Consensus 203 ~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~ 282 (477)
T TIGR01722 203 KEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS 282 (477)
T ss_pred HHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCe
Confidence 334455566999999999999999999987764 6899999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++ | +|+++|++++++.
T Consensus 283 rl~v~~~~-~-~f~~~l~~~~~~~ 304 (477)
T TIGR01722 283 AAVLVGAA-D-EWVPEIRERAEKI 304 (477)
T ss_pred EEEEeCcH-H-HHHHHHHHHHhcC
Confidence 99999999 8 9999999998765
No 105
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=100.00 E-value=2e-42 Score=313.77 Aligned_cols=169 Identities=18% Similarity=0.233 Sum_probs=153.9
Q ss_pred EEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-chHHH
Q psy18173 16 QVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-REEIS 91 (191)
Q Consensus 16 ~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~~~~ 91 (191)
..++|+|||++|+|| ||.... +++++||++||+||+|||+++|.++..+++++. ++|+| |++|++++ ..+..
T Consensus 156 ~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~ 231 (500)
T TIGR01238 156 FSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQ----EAGFPAGTIQLLPGRGADVG 231 (500)
T ss_pred eeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHH----HcCCCCCceEEEecCcchHH
Confidence 368999999999999 996555 689999999999999999999999988887765 79999 99999996 44566
Q ss_pred HHHhcCCCcCEEEeeCCHHHHHHHHHhcC--C---CcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 92 DLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--H---IPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 92 ~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~---~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
+.|..||++|+|+||||+.+++.|++.++ . +|+++|+|||||+||++|||+|+|++.+++|+| ++||.|++++|
T Consensus 232 ~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~r 311 (500)
T TIGR01238 232 AALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRV 311 (500)
T ss_pred HHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCce
Confidence 66667999999999999999999998764 2 699999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhcC
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~g 189 (191)
+|||+++|| +|+++|++++++..
T Consensus 312 v~V~~~i~d-~f~~~L~~~~~~~~ 334 (500)
T TIGR01238 312 LCVQEDVAD-RVLTMIQGAMQELK 334 (500)
T ss_pred eEEcHhhHH-HHHHHHHHHHHhCC
Confidence 999999999 99999999998763
No 106
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=100.00 E-value=2.6e-42 Score=308.39 Aligned_cols=168 Identities=25% Similarity=0.271 Sum_probs=153.6
Q ss_pred eeEEEeecceeEEEEeCC-CCch-hHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-ch
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDS-LPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-RE 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~-~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~ 88 (191)
..+.+++|+|||++|+|| ||.+ ..+++++||++||+||+|||+.+|+++..+.+++++ |+| |++|++++ ++
T Consensus 101 ~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~-----~lP~g~v~vv~g~~~ 175 (436)
T cd07135 101 KPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK-----YLDPDAFQVVQGGVP 175 (436)
T ss_pred ceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-----hCCcCEEEEEcCCch
Confidence 456789999999999999 9954 457999999999999999999999999999998873 699 99999996 56
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
+.++++. || +|.|.||||+.+|+++++.++ .+|+++|+|||||+||++|||+++|++.+++|+| ++||.|++++|
T Consensus 176 ~~~~l~~-~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~r 253 (436)
T cd07135 176 ETTALLE-QK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDY 253 (436)
T ss_pred hHHHHHh-CC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHhccCCceecCCCE
Confidence 6667655 88 999999999999999987664 6999999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||+++|| +|+++|++++++.
T Consensus 254 v~V~~~i~d-~f~~~l~~~~~~~ 275 (436)
T cd07135 254 VLVDPSVYD-EFVEELKKVLDEF 275 (436)
T ss_pred EeccHHHHH-HHHHHHHHHHHHh
Confidence 999999999 9999999998765
No 107
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=100.00 E-value=1.3e-41 Score=300.35 Aligned_cols=175 Identities=29% Similarity=0.374 Sum_probs=159.6
Q ss_pred eeEEEeecceeEEEEeCC-CCchhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-chH
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-REE 89 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~~ 89 (191)
..+++++|+|||++|+|| ||....+++++||++||+||+|||+.+|+++..+++++.+++. +|+| +++|++++ ..+
T Consensus 93 ~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~-~g~p~~~v~~v~~~~~~ 171 (397)
T cd07077 93 ETYVRAFPIGVTMHILPSTNPLSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADA-AHGPKILVLYVPHPSDE 171 (397)
T ss_pred ceEEEEecceEEEEEeCCCCchHHHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhh-cCCCCceEEEecCCCHH
Confidence 567899999999999999 9966557899999999999999999999999999999987754 7899 99999985 445
Q ss_pred HHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceEEE
Q psy18173 90 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETLLI 168 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v~V 168 (191)
..+.+..||++|+|+||||+++++.+.+++..+|+++|+|||||+||++|||+|.|++.+++++| | ||.|++++|+||
T Consensus 172 ~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~~~~-GQ~C~a~~~v~V 250 (397)
T cd07077 172 LAEELLSHPKIDLIVATGGRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNACASEQNLYV 250 (397)
T ss_pred HHHHHHcCCCCCEEEecCCHHHHHHHHHcCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHhhccC-CccCCCCeEEEE
Confidence 55655558999999999999999999888766999999999999999999999999999999999 8 999999999999
Q ss_pred ecCcCCcchHHHHHHHHHhcCC
Q psy18173 169 HEDHFQGSFFTDVCKMFRDEGV 190 (191)
Q Consensus 169 ~~~i~~~~f~~~l~~~~~~~g~ 190 (191)
|+++|| +|+++|++++++.|.
T Consensus 251 ~~~i~d-~~~~~l~~~~~~~G~ 271 (397)
T cd07077 251 VDDVLD-PLYEEFKLKLVVEGL 271 (397)
T ss_pred ehhhhH-HHHHHHHHHHHhcCc
Confidence 999999 999999999987664
No 108
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=100.00 E-value=2e-42 Score=310.67 Aligned_cols=175 Identities=25% Similarity=0.320 Sum_probs=158.1
Q ss_pred cCCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEec
Q psy18173 9 ADGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVS 85 (191)
Q Consensus 9 ~~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~ 85 (191)
+.+...+.+++|+|||++|+|| ||..+. .++++||++||+||+|||+.+|.++.+++++++ ++|+| |++|+++
T Consensus 115 ~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~----~AglP~gvv~vv~ 190 (462)
T PF00171_consen 115 DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLLAELLE----EAGLPPGVVNVVP 190 (462)
T ss_dssp STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHH----HHTSTTTSEEEEC
T ss_pred ccccccccccccccceeecccccccccccccchhhhhcccccceeeeccccccccccchhhcc----ccccccccccccc
Confidence 4677788999999999999999 996665 689999999999999999999999999998886 57999 9999999
Q ss_pred C-chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccc
Q psy18173 86 T-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACN 161 (191)
Q Consensus 86 ~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~ 161 (191)
+ ..+..+.|..||++++|.||||+++++++++.++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||.|+
T Consensus 191 g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~ 270 (462)
T PF00171_consen 191 GDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCT 270 (462)
T ss_dssp SSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTT
T ss_pred cccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccccceeeEecccccccccccccchhccccccccc
Confidence 7 6677777777999999999999999999998764 6999999999999999999999999999999999 9999999
Q ss_pred cCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 162 AMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 162 s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+++|+|||+++|| +|+++|++++++.
T Consensus 271 a~~~v~V~~~i~~-~f~~~l~~~~~~l 296 (462)
T PF00171_consen 271 APSRVLVHESIYD-EFVEALKERVAKL 296 (462)
T ss_dssp SEEEEEEEHHHHH-HHHHHHHHHHHTS
T ss_pred ccccccccccccc-hhhhhhhhccccc
Confidence 9999999999999 9999999998765
No 109
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=6.6e-42 Score=309.97 Aligned_cols=171 Identities=23% Similarity=0.218 Sum_probs=155.3
Q ss_pred eeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-ch
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-RE 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~ 88 (191)
..+.+++|+|||++|+|| ||... .+++++||++||+||+|||+.+|.++..+++++. ++|+| |++|++++ ..
T Consensus 150 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~----~aGlP~g~v~~v~g~~~ 225 (494)
T PRK09847 150 LAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAK----EAGLPDGVLNVVTGFGH 225 (494)
T ss_pred eeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHH----HcCcCcCcEEEEeCCCh
Confidence 456789999999999999 99554 4789999999999999999999999999988765 79999 99999996 45
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCC-CHHHHHHHHHHhhc-CCCCccccC
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDA-DIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~da-dl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
+..+.|..||++|+|.||||+.+|+.++++++ .+|+.+|+|||||+||.+|+ |+|+|++.+++++| ++||.|+++
T Consensus 226 ~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~ 305 (494)
T PRK09847 226 EAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAG 305 (494)
T ss_pred hHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCC
Confidence 55566666999999999999999999988663 58999999999999999997 99999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+|||+++|| +|+++|++++++.
T Consensus 306 ~rv~V~~~i~d-~f~~~l~~~~~~~ 329 (494)
T PRK09847 306 TRLLLEESIAD-EFLALLKQQAQNW 329 (494)
T ss_pred cEEEEcHHHHH-HHHHHHHHHHHhc
Confidence 99999999999 9999999999876
No 110
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=100.00 E-value=9.6e-42 Score=304.45 Aligned_cols=169 Identities=24% Similarity=0.281 Sum_probs=151.1
Q ss_pred eeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCchH
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTREE 89 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~~~ 89 (191)
..+.+++|+|||++|+|| ||.+.. +++++||++||+||+|||+.+|+++..+++++++ ++| |++|++++..+
T Consensus 94 ~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~-----~~P~gvv~~v~g~~~ 168 (432)
T cd07137 94 KAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPE-----YLDTKAIKVIEGGVP 168 (432)
T ss_pred eeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHH-----hCCcCeEEEEeCCHH
Confidence 456789999999999999 996655 7899999999999999999999999999999874 489 99999996433
Q ss_pred HHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc--CCCCccccCce
Q psy18173 90 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC--DYPAACNAMET 165 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~--~~GQ~C~s~~~ 165 (191)
..+.|..| ++++|.||||+++|++|++.++ .+|+++|+|||||+||++|||++.|++.+++|+| ++||.|++++|
T Consensus 169 ~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C~a~~r 247 (432)
T cd07137 169 ETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDY 247 (432)
T ss_pred HHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCCcccCCCE
Confidence 44444435 6999999999999999988764 6999999999999999999999999999999997 68999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||+++|| +|+++|++++++.
T Consensus 248 v~V~~~i~d-~f~~~l~~~~~~~ 269 (432)
T cd07137 248 VLVEESFAP-TLIDALKNTLEKF 269 (432)
T ss_pred EEEcHHHHH-HHHHHHHHHHHHH
Confidence 999999999 9999999988764
No 111
>PLN02203 aldehyde dehydrogenase
Probab=100.00 E-value=1.5e-41 Score=306.90 Aligned_cols=170 Identities=22% Similarity=0.250 Sum_probs=153.3
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCch
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTRE 88 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~~ 88 (191)
...++.++|+|||++|+|| ||.... +++++||++||+||+|||+.+|+++..+.+++++ ++| |++|++++..
T Consensus 100 ~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~-----~lP~gvv~vv~g~~ 174 (484)
T PLN02203 100 ATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPK-----YLDSKAVKVIEGGP 174 (484)
T ss_pred ceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH-----hCCcCEEEEEeCCH
Confidence 3457889999999999999 995555 6899999999999999999999999999998863 499 9999999755
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcC---CCCHHHHHHHHHHhhc-C-CCCccc
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDK---DADIRKAIKIARDSKC-D-YPAACN 161 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~---dadl~~aa~~iv~~~~-~-~GQ~C~ 161 (191)
++++.|..|+ +|.|+||||+++|+.|+++++ .+|+++|+|||||+||++ |||+++|++.+++|+| + +||.|+
T Consensus 175 ~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~~f~~~aGQ~C~ 253 (484)
T PLN02203 175 AVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACI 253 (484)
T ss_pred HHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHHhcccCCCCccc
Confidence 5667666674 999999999999999988775 699999999999999997 6999999999999999 4 899999
Q ss_pred cCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 162 AMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 162 s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+++|+|||+++|| +|+++|++++++.
T Consensus 254 a~~rv~V~~~i~d-~f~~~L~~~~~~~ 279 (484)
T PLN02203 254 AIDYVLVEERFAP-ILIELLKSTIKKF 279 (484)
T ss_pred cCCeEEEcHHHHH-HHHHHHHHHHHHh
Confidence 9999999999999 9999999988764
No 112
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=100.00 E-value=1.4e-41 Score=304.16 Aligned_cols=168 Identities=23% Similarity=0.282 Sum_probs=151.7
Q ss_pred eeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-ch
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-RE 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~ 88 (191)
..+..++|+|||++|+|| ||... .+++++||++||+||+|||+.+|.++..+++++++ ++| |++|++++ .+
T Consensus 93 ~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~-----~lp~gv~~vv~g~~~ 167 (443)
T cd07132 93 DVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPK-----YLDKECYPVVLGGVE 167 (443)
T ss_pred ceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-----hCCcCeEEEEeCCHH
Confidence 356789999999999999 99554 57899999999999999999999999999999863 499 99999996 44
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
....++. +++|.|.||||+++|+++++.++ .+|+++|+|||||+||++|||++.|++.+++|+| ++||.|++++|
T Consensus 168 ~~~~l~~--~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~r 245 (443)
T cd07132 168 ETTELLK--QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDY 245 (443)
T ss_pred HHHHHHh--CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCceeCCcE
Confidence 4555553 58999999999999999988764 6999999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||+++|| +|++.|++++++.
T Consensus 246 v~V~~~i~d-~f~~~l~~~~~~~ 267 (443)
T cd07132 246 VLCTPEVQE-KFVEALKKTLKEF 267 (443)
T ss_pred EEEcHHHHH-HHHHHHHHHHHHh
Confidence 999999999 9999999988765
No 113
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=100.00 E-value=2.6e-41 Score=304.30 Aligned_cols=173 Identities=21% Similarity=0.219 Sum_probs=158.6
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST- 86 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~- 86 (191)
+...+.+++|+|||++|+|| ||... .+.+++||++||+||+|||+.+|.++..+.++++ ++|+| |++|++++
T Consensus 132 ~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~----~aglp~~~~~vv~g~ 207 (473)
T cd07082 132 GKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFH----DAGFPKGVVNVVTGR 207 (473)
T ss_pred CceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HcCCCccceEEEecC
Confidence 44567889999999999999 99654 4789999999999999999999999998888765 68999 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
..+..+.|..|+++|+|+||||+++++.|.+.++.+|+.+|+|||||+||++|||+++|++.+++++| ++||.|++++|
T Consensus 208 ~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~ 287 (473)
T cd07082 208 GREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKR 287 (473)
T ss_pred cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhCCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeE
Confidence 45556766679999999999999999999988778999999999999999999999999999999999 99999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||++++| +|+++|.+++++.
T Consensus 288 v~v~~~i~d-~f~~~l~~~~~~~ 309 (473)
T cd07082 288 VLVHESVAD-ELVELLKEEVAKL 309 (473)
T ss_pred EEEcHHHHH-HHHHHHHHHHhcC
Confidence 999999999 9999999999876
No 114
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=100.00 E-value=2.6e-41 Score=302.42 Aligned_cols=171 Identities=15% Similarity=0.177 Sum_probs=156.6
Q ss_pred eeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCC-C-CeEEEecC-
Q psy18173 12 LSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGA-Q-DAISLVST- 86 (191)
Q Consensus 12 ~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGl-P-g~v~~l~~- 86 (191)
...+.+++|+|||++|+|| ||.+.. .++++||++||+||+|||+.+|.++..+.++++ ++|+ | |++|++++
T Consensus 92 ~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~----~ag~~P~g~~~~v~g~ 167 (442)
T cd07084 92 QQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLH----YAGLLPPEDVTLINGD 167 (442)
T ss_pred ccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHH----HhCCCCccceEEeeCC
Confidence 3456789999999999999 997555 689999999999999999999999999998886 6888 9 99999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCC-CHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDA-DIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~da-dl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
.+ ....|..||++++|+||||++++++++++++.+|+++|+|||||+||++|| |+|.|++.+++++| ++||.|++++
T Consensus 168 ~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~GQ~C~a~~ 246 (442)
T cd07084 168 GK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQS 246 (442)
T ss_pred cH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccCCcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcccCCeecCCc
Confidence 44 666666699999999999999999999887668999999999999999999 69999999999999 9999999999
Q ss_pred eEEEecC-cCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHED-HFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~-i~~~~f~~~l~~~~~~~ 188 (191)
|+|||++ +|| +|+++|++++++.
T Consensus 247 rl~V~~~~i~~-~f~~~l~~~~~~~ 270 (442)
T cd07084 247 MLFVPENWSKT-PLVEKLKALLARR 270 (442)
T ss_pred EEEEeCCccHH-HHHHHHHHHHHhc
Confidence 9999999 999 9999999999876
No 115
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=2.6e-41 Score=326.19 Aligned_cols=174 Identities=18% Similarity=0.216 Sum_probs=159.0
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.|...+..++|+|||++|+|| ||...+ ..+++||++||+||+|||+++|+++..++++++ ++|+| |++|++++
T Consensus 674 ~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~----eAGlP~gvl~lv~G 749 (1038)
T PRK11904 674 TGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLH----EAGIPKDVLQLLPG 749 (1038)
T ss_pred CCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHH----HhCcCcceEEEeeC
Confidence 455667789999999999999 996665 689999999999999999999999999998876 79999 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC-----CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCc
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ-----HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAA 159 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-----~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~ 159 (191)
++++++.+..||+|++|.||||+++++.|.+.++ .+|+++|+|||||+||++|||+|+|++.+++|+| ++||.
T Consensus 750 ~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~ 829 (1038)
T PRK11904 750 DGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQR 829 (1038)
T ss_pred CchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCc
Confidence 5557777777999999999999999999986653 4789999999999999999999999999999999 99999
Q ss_pred cccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 160 CNAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 160 C~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|++++|+|||+++|| +|+++|++++++.
T Consensus 830 CsA~~rl~V~~si~d-~fl~~L~~~~~~l 857 (1038)
T PRK11904 830 CSALRVLFVQEDIAD-RVIEMLKGAMAEL 857 (1038)
T ss_pred cccCcEEEEeHHHHH-HHHHHHHHHHHhc
Confidence 999999999999999 9999999998876
No 116
>KOG2456|consensus
Probab=100.00 E-value=1.7e-41 Score=292.73 Aligned_cols=168 Identities=23% Similarity=0.269 Sum_probs=155.2
Q ss_pred eEEEeecceeEEEEeCC-CC-chhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCCCeEEEecC-chHH
Q psy18173 14 LSQVTVPIGVLLVIFES-RP-DSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQDAISLVST-REEI 90 (191)
Q Consensus 14 ~~~~~~PlGvv~~I~p~-~P-~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlPg~v~~l~~-~~~~ 90 (191)
.+...+|+|+|++|+|| || .++..+++.||+|||+||+|||+-+|.++..+++++.++|+. ++++++.| .+++
T Consensus 98 ~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Yld~----~~~~VV~Ggv~ET 173 (477)
T KOG2456|consen 98 AYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQYLDQ----DLIRVVNGGVPET 173 (477)
T ss_pred eeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHhcCc----ceEEEecCCCchH
Confidence 45788999999999999 99 777789999999999999999999999999999999875432 99999995 6788
Q ss_pred HHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceEE
Q psy18173 91 SDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETLL 167 (191)
Q Consensus 91 ~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v~ 167 (191)
.++|. .++|+|+||||+.+|+.++.+++ .+|+++|+|||+|+||++|+|++.|+++|+|+|+ |+||.|+++++|+
T Consensus 174 t~LL~--~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~GQtCvapDYiL 251 (477)
T KOG2456|consen 174 TELLK--QRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSGQTCVAPDYIL 251 (477)
T ss_pred HHHHH--hhccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCCCeeccCCeEE
Confidence 89988 39999999999999999998775 7999999999999999999999999999999999 9999999999999
Q ss_pred EecCcCCcchHHHHHHHHHhc
Q psy18173 168 IHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 168 V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++++++. .++++++..+++.
T Consensus 252 ~~k~~~~-kli~alk~~l~eF 271 (477)
T KOG2456|consen 252 CSKSIQP-KLIDALKSTLKEF 271 (477)
T ss_pred ecHhhhH-HHHHHHHHHHHHH
Confidence 9999998 9999999988874
No 117
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=100.00 E-value=4.2e-41 Score=305.80 Aligned_cols=168 Identities=16% Similarity=0.168 Sum_probs=149.5
Q ss_pred eEEEeec-ceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcC-CC-CeEEEecCch
Q psy18173 14 LSQVTVP-IGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVG-AQ-DAISLVSTRE 88 (191)
Q Consensus 14 ~~~~~~P-lGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aG-lP-g~v~~l~~~~ 88 (191)
.+..++| +|||++|+|| ||.+.. +++++||++||+||+|||+.+|+++..+++++. ++| +| |++|++++..
T Consensus 137 ~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----eaG~lP~gv~~~v~g~~ 212 (513)
T cd07128 137 GQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIV----ESGLLPEGALQLICGSV 212 (513)
T ss_pred ceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHH----HhCCCCCCcEEEecCCh
Confidence 4567899 5999999999 995555 789999999999999999999999999998876 789 89 9999999631
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhc----CCCcEEEecCccCeEEEcCCCC-----HHHHHHHHHHhhc-CCCC
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKS----QHIPVLGHAEGICHVYVDKDAD-----IRKAIKIARDSKC-DYPA 158 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~----~~~~~~~e~gG~n~~iV~~dad-----l~~aa~~iv~~~~-~~GQ 158 (191)
.++...-+++|+|.||||+++|+++++++ ..+|+++|+|||||+||++||| +|.|++.+++++| ++||
T Consensus 213 --~~~~~~l~~~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ 290 (513)
T cd07128 213 --GDLLDHLGEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQ 290 (513)
T ss_pred --HHHhcccCCCCEEEEECCHHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCC
Confidence 12222126789999999999999999874 2699999999999999999999 9999999999999 9999
Q ss_pred ccccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 159 ACNAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 159 ~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
.|++++|+|||+++|| +|+++|++++++.
T Consensus 291 ~C~a~~rv~V~~~i~d-~f~~~l~~~~~~l 319 (513)
T cd07128 291 KCTAIRRAFVPEARVD-AVIEALKARLAKV 319 (513)
T ss_pred cccCCceEEEehHHHH-HHHHHHHHHHHhc
Confidence 9999999999999999 9999999999875
No 118
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=100.00 E-value=5.1e-41 Score=312.98 Aligned_cols=169 Identities=15% Similarity=0.163 Sum_probs=152.1
Q ss_pred eeEEEeecc-eeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcC-CC-CeEEEecCc
Q psy18173 13 SLSQVTVPI-GVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVG-AQ-DAISLVSTR 87 (191)
Q Consensus 13 ~~~~~~~Pl-Gvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aG-lP-g~v~~l~~~ 87 (191)
..+..|+|+ |||++|+|| ||.+.. +++++||++||+||+|||+.+|+++..+++++. ++| +| |++|++++.
T Consensus 136 ~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~----~aG~lP~gv~~~v~g~ 211 (663)
T TIGR02278 136 QGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMV----ESGLLPEGSLQLICGS 211 (663)
T ss_pred ceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HhCCCCCCcEEEEeCC
Confidence 456789998 999999999 995555 799999999999999999999999999998876 689 89 999999973
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhc----CCCcEEEecCccCeEEEcCCCC-----HHHHHHHHHHhhc-CCC
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS----QHIPVLGHAEGICHVYVDKDAD-----IRKAIKIARDSKC-DYP 157 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~----~~~~~~~e~gG~n~~iV~~dad-----l~~aa~~iv~~~~-~~G 157 (191)
..+++..++++|+|.||||+++|++|++.+ ..+|+++|+|||||+||++||| +|.|++.+++|+| ++|
T Consensus 212 --~~~~~~~~~~~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sG 289 (663)
T TIGR02278 212 --AGDLLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAG 289 (663)
T ss_pred --hHHHHhcCCCCCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCC
Confidence 233444447899999999999999999853 2699999999999999999999 9999999999999 999
Q ss_pred CccccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 158 AACNAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 158 Q~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|.|++++|+|||+++|| +|+++|++++++.
T Consensus 290 Q~C~a~~rv~V~~~i~d-~f~~~l~~~~~~l 319 (663)
T TIGR02278 290 QKCTAIRRVIVPKALLE-AVLKALQARLAKV 319 (663)
T ss_pred CCccCCceEEEeHHHHH-HHHHHHHHHHHhc
Confidence 99999999999999999 9999999999875
No 119
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=100.00 E-value=6e-41 Score=298.65 Aligned_cols=169 Identities=23% Similarity=0.270 Sum_probs=151.9
Q ss_pred eeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCchH
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTREE 89 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~~~ 89 (191)
..+.+++|+|||++|+|| ||.+.+ +++++||++||+||+|||+.+|.++.+++++++ + |+| |++|++++..+
T Consensus 93 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~----~-~~P~gv~~vv~g~~~ 167 (426)
T cd07087 93 KAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIP----K-YFDPEAVAVVEGGVE 167 (426)
T ss_pred ceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHH----H-hCCCCEEEEEeCCch
Confidence 456789999999999999 996554 789999999999999999999999999998886 3 699 99999996333
Q ss_pred HHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceE
Q psy18173 90 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETL 166 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v 166 (191)
....+..|| ++.|.||||++++++|++.+. .+|+++|+|||||+||++|||+++|++.+++++| ++||.|++++|+
T Consensus 168 ~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv 246 (426)
T cd07087 168 VATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYV 246 (426)
T ss_pred HHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCccccCCEE
Confidence 344445578 999999999999999988764 6899999999999999999999999999999999 999999999999
Q ss_pred EEecCcCCcchHHHHHHHHHhc
Q psy18173 167 LIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 167 ~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|||+++|| +|++.|++++++.
T Consensus 247 ~V~~~i~d-~f~~~L~~~~~~l 267 (426)
T cd07087 247 LVHESIKD-ELIEELKKAIKEF 267 (426)
T ss_pred EEcHHHHH-HHHHHHHHHHHHH
Confidence 99999999 9999999998764
No 120
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=3.1e-41 Score=329.59 Aligned_cols=168 Identities=18% Similarity=0.251 Sum_probs=155.4
Q ss_pred EEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-chHHH
Q psy18173 16 QVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-REEIS 91 (191)
Q Consensus 16 ~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~~~~ 91 (191)
..++|+|||++|+|| ||...+ .++++||++||+||+|||++||+++..++++++ ++|+| |++|+++| +++++
T Consensus 764 ~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~----eAGlP~gvlqlv~G~g~~vg 839 (1318)
T PRK11809 764 DTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILL----EAGVPAGVVQLLPGRGETVG 839 (1318)
T ss_pred ceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHH----HhCcCcCeEEEeeCCcHHHH
Confidence 468999999999999 996666 589999999999999999999999999998876 69999 99999996 56677
Q ss_pred HHHhcCCCcCEEEeeCCHHHHHHHHHhcC--------CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 92 DLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--------HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 92 ~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--------~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
+.|..||+|++|.||||+++|+.|++.++ .+|+++|+|||||+||++|||+|+|++.+++|+| ++||+|++
T Consensus 840 ~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA 919 (1318)
T PRK11809 840 AALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSA 919 (1318)
T ss_pred HHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCcccc
Confidence 88888999999999999999999987643 2689999999999999999999999999999999 89999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
++++|||++||| +|+++|+.++++.
T Consensus 920 ~~rl~V~e~Iad-~fl~~L~~a~~~l 944 (1318)
T PRK11809 920 LRVLCLQDDVAD-RTLKMLRGAMAEC 944 (1318)
T ss_pred CcEEEEcHHHHH-HHHHHHHHHHHhc
Confidence 999999999999 9999999998876
No 121
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=100.00 E-value=7.4e-41 Score=298.75 Aligned_cols=171 Identities=21% Similarity=0.239 Sum_probs=153.3
Q ss_pred CeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCc
Q psy18173 11 GLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTR 87 (191)
Q Consensus 11 g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~ 87 (191)
+...+..|+|+|||++|+|| ||...+ +++++||++||+||+|||+.+|.++..+.++++ ++ +| |+++++++.
T Consensus 91 ~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~----~a-~p~g~v~~v~g~ 165 (433)
T cd07134 91 GTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIR----EA-FDEDEVAVFEGD 165 (433)
T ss_pred CCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHH----Hh-CCcCEEEEEeCC
Confidence 44567889999999999999 996665 689999999999999999999999999998887 45 78 999999964
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCc
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAME 164 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~ 164 (191)
.+....|..|+ ++.|.||||+.+|+.+++.++ .+|+.+|+|||||+||++|||+++|++.+++++| ++||.|++++
T Consensus 166 ~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~a~~ 244 (433)
T cd07134 166 AEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPD 244 (433)
T ss_pred hhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCcccCCc
Confidence 34445555577 999999999999999998764 6899999999999999999999999999999999 9999999999
Q ss_pred eEEEecCcCCcchHHHHHHHHHhc
Q psy18173 165 TLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 165 ~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|+|||+++|| +|++.|++++++.
T Consensus 245 rv~V~~~v~d-~f~~~L~~~~~~~ 267 (433)
T cd07134 245 YVFVHESVKD-AFVEHLKAEIEKF 267 (433)
T ss_pred EEEECHHHHH-HHHHHHHHHHHHH
Confidence 9999999999 9999999988764
No 122
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.1e-41 Score=312.45 Aligned_cols=168 Identities=15% Similarity=0.191 Sum_probs=150.7
Q ss_pred eEEEeecc-eeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcC-CC-CeEEEecCch
Q psy18173 14 LSQVTVPI-GVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVG-AQ-DAISLVSTRE 88 (191)
Q Consensus 14 ~~~~~~Pl-Gvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aG-lP-g~v~~l~~~~ 88 (191)
.+..++|+ |||++|+|| ||.+.+ +++++||++||+||+|||+.+|+++..+++++. ++| +| |++|++++..
T Consensus 141 ~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~----eaG~~P~gv~~vv~g~~ 216 (675)
T PRK11563 141 GRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIV----ESGLLPEGALQLICGSA 216 (675)
T ss_pred ceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHH----HcCCCCCCcEEEeeCCH
Confidence 46788997 999999999 995555 689999999999999999999999999998876 689 89 9999999632
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhc----CCCcEEEecCccCeEEEcCCCC-----HHHHHHHHHHhhc-CCCC
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKS----QHIPVLGHAEGICHVYVDKDAD-----IRKAIKIARDSKC-DYPA 158 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~----~~~~~~~e~gG~n~~iV~~dad-----l~~aa~~iv~~~~-~~GQ 158 (191)
.+++..++++++|.||||+++|++|++.+ ..+|+++|+|||||+||++||| +|+|++.+++|+| ++||
T Consensus 217 --~~~~~~~~~i~~v~FTGS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ 294 (675)
T PRK11563 217 --GDLLDHLDGQDVVTFTGSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQ 294 (675)
T ss_pred --HHHhhcCCCCCEEEEECcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCC
Confidence 23455457899999999999999998742 2699999999999999999995 9999999999999 9999
Q ss_pred ccccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 159 ACNAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 159 ~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
.|++++|+|||+++|| +|+++|++++++.
T Consensus 295 ~C~a~~rv~V~~~i~d-~f~~~l~~~~~~l 323 (675)
T PRK11563 295 KCTAIRRAIVPRALVD-AVIEALRARLAKV 323 (675)
T ss_pred ccccceeEEeeHHHHH-HHHHHHHHHHhcC
Confidence 9999999999999999 9999999999875
No 123
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=3.1e-40 Score=300.68 Aligned_cols=167 Identities=19% Similarity=0.226 Sum_probs=149.2
Q ss_pred eEEEeec-ceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcC-CC-CeEEEecC-c
Q psy18173 14 LSQVTVP-IGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVG-AQ-DAISLVST-R 87 (191)
Q Consensus 14 ~~~~~~P-lGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aG-lP-g~v~~l~~-~ 87 (191)
.+..++| +|||++|+|| ||.+.. +++++||++||+||+|||+.+|.++..+.+++. ++| +| |++|++++ +
T Consensus 141 ~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~----~ag~lP~gv~~~v~g~~ 216 (521)
T PRK11903 141 GQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVV----AAGILPAGALSVVCGSS 216 (521)
T ss_pred ceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHH----HhCCCCcCceEEeeCCc
Confidence 4567899 6999999999 995555 689999999999999999999999999988875 688 89 99999996 4
Q ss_pred hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhc----CCCcEEEecCccCeEEEcCCCC-----HHHHHHHHHHhhc-CCC
Q psy18173 88 EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS----QHIPVLGHAEGICHVYVDKDAD-----IRKAIKIARDSKC-DYP 157 (191)
Q Consensus 88 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~----~~~~~~~e~gG~n~~iV~~dad-----l~~aa~~iv~~~~-~~G 157 (191)
++..+.+ +++|+|.||||+++|+++++++ ..+|+++|+|||||+||++||| ++.|++.+++|+| ++|
T Consensus 217 ~~~~~~l---~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sG 293 (521)
T PRK11903 217 AGLLDHL---QPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSG 293 (521)
T ss_pred hHHHhcc---cCCCEEEEECCHHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccC
Confidence 4433322 7999999999999999998863 2689999999999999999999 5999999999999 999
Q ss_pred CccccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 158 AACNAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 158 Q~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|.|++++|+|||+++|| +|+++|++++++.
T Consensus 294 Q~C~a~~rv~V~~~i~d-~f~~~L~~~~~~l 323 (521)
T PRK11903 294 QKCTAIRRIFVPEALYD-AVAEALAARLAKT 323 (521)
T ss_pred CCccCCeEEEEehhHHH-HHHHHHHHHHHhc
Confidence 99999999999999999 9999999999875
No 124
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=3.6e-40 Score=321.71 Aligned_cols=168 Identities=20% Similarity=0.250 Sum_probs=154.8
Q ss_pred EEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-chHHH
Q psy18173 16 QVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-REEIS 91 (191)
Q Consensus 16 ~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~~~~ 91 (191)
..++|+|||++|+|| ||...+ ..+++||++||+||+|||+++|+++..++++++ ++|+| |++|+++| +++++
T Consensus 672 ~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~----eAGlP~gvl~lV~G~g~~vg 747 (1208)
T PRK11905 672 PGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLH----EAGVPKDALQLLPGDGRTVG 747 (1208)
T ss_pred ceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHH----HcCCCcccEEEeeCCchHHH
Confidence 467899999999999 996666 689999999999999999999999999998876 69999 99999996 55577
Q ss_pred HHHhcCCCcCEEEeeCCHHHHHHHHHhcC-----CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 92 DLLSMEKHIDLIIPRGSSDLVRSIQQKSQ-----HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 92 ~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-----~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
+.|..||+|++|.||||+++++.|.+.++ .+|+++|+|||||+||++|||+|.|++.+++|+| ++||+|+++++
T Consensus 748 ~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~r 827 (1208)
T PRK11905 748 AALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRV 827 (1208)
T ss_pred HHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcE
Confidence 77777999999999999999999987643 3899999999999999999999999999999999 89999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|||+++|| +|+++|++++++.
T Consensus 828 l~V~~si~d-~f~e~L~~~~~~l 849 (1208)
T PRK11905 828 LCLQEDVAD-RVLTMLKGAMDEL 849 (1208)
T ss_pred EEEehhHHH-HHHHHHHHHHHHh
Confidence 999999999 9999999998876
No 125
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=100.00 E-value=1.9e-37 Score=275.41 Aligned_cols=175 Identities=23% Similarity=0.246 Sum_probs=158.0
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.+...+.+++|+|||++|+|| ||... .+.+++||++||+||+|||+++|.++..+.++++ ++|+| |+++++++
T Consensus 86 ~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~----~ag~p~~~~~~~~~ 161 (432)
T cd07078 86 PGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLA----EAGLPPGVLNVVTG 161 (432)
T ss_pred CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HcCCCcCcEEEEec
Confidence 455567889999999999999 99554 4789999999999999999999999999998876 68999 99999996
Q ss_pred -chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 87 -REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 87 -~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
.+...+.+..|+++|+|.||||.++++++.+.++ .+|+++|+||+|++||++|+|++.|++.+++++| ++||.|++
T Consensus 162 ~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~a 241 (432)
T cd07078 162 DGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTA 241 (432)
T ss_pred CchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCccC
Confidence 4435566666899999999999999999988775 4899999999999999999999999999999999 99999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhcC
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDEG 189 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~g 189 (191)
++++|||++++| +|+++|+++++++.
T Consensus 242 ~~~i~v~~~~~~-~~~~~L~~~l~~~~ 267 (432)
T cd07078 242 ASRLLVHESIYD-EFVERLVERVKALK 267 (432)
T ss_pred CceEEEcHHHHH-HHHHHHHHHHHccC
Confidence 999999999999 99999999998763
No 126
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=100.00 E-value=1.7e-36 Score=264.39 Aligned_cols=169 Identities=25% Similarity=0.293 Sum_probs=152.2
Q ss_pred cCCeeeEEEeecceeEEEEeCC-CCch-hHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEec
Q psy18173 9 ADGLSLSQVTVPIGVLLVIFES-RPDS-LPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVS 85 (191)
Q Consensus 9 ~~g~~~~~~~~PlGvv~~I~p~-~P~~-~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~ 85 (191)
..+...+.+++|+|+|++|+|| +|.+ ..+.+++||++||+||+|||+.+|.++..+.+++. ++|+| |++++++
T Consensus 81 ~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~----~ag~p~~~v~~~~ 156 (367)
T cd06534 81 DPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQ----EAGLPPGVVNVVP 156 (367)
T ss_pred CCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----hcCCCcCeEEEEE
Confidence 4455677899999999999999 9966 55789999999999999999999999999888765 68999 9999999
Q ss_pred C-chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccc
Q psy18173 86 T-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACN 161 (191)
Q Consensus 86 ~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~ 161 (191)
+ .++..+.+..|+++|+|.||||+++++.+.+.++ .+|+++|+||+|++||++|+|+++|++.+++++| ++||.|+
T Consensus 157 ~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~ 236 (367)
T cd06534 157 GGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICT 236 (367)
T ss_pred cCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCC
Confidence 6 4445565666899999999999999999988775 4899999999999999999999999999999999 8999999
Q ss_pred cCceEEEecCcCCcchHHHHH
Q psy18173 162 AMETLLIHEDHFQGSFFTDVC 182 (191)
Q Consensus 162 s~~~v~V~~~i~~~~f~~~l~ 182 (191)
+++++|||++++| +|+++|+
T Consensus 237 s~~~v~v~~~~~~-~f~~~l~ 256 (367)
T cd06534 237 AASRLLVHESIYD-EFVEKLV 256 (367)
T ss_pred CCcEEEEcHHHHH-HHHHhhc
Confidence 9999999999998 9988875
No 127
>KOG2454|consensus
Probab=100.00 E-value=1.6e-36 Score=260.97 Aligned_cols=185 Identities=21% Similarity=0.303 Sum_probs=169.8
Q ss_pred ccceeeecCCeee-----EEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHh
Q psy18173 2 VLRRTRLADGLSL-----SQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALAS 74 (191)
Q Consensus 2 ~~~~~~~~~g~~~-----~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~ 74 (191)
-|++++|++++.+ ++.|+|+||+++|.|| ||+... .++..||-+||.+|+|.|+++.+++....++++.+|..
T Consensus 165 ~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a 244 (583)
T KOG2454|consen 165 WLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAA 244 (583)
T ss_pred hcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHH
Confidence 3566777877653 4689999999999999 997777 57899999999999999999999999999999999999
Q ss_pred cCCC-CeEEEecCchHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--CCcEEEecCccCeEEEcCCCCHHHHHHHHHH
Q psy18173 75 VGAQ-DAISLVSTREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARD 151 (191)
Q Consensus 75 aGlP-g~v~~l~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~ 151 (191)
.|-| +++|++++-.+..+.+++|+.++++.|.||.++++.|++.++ ++|+.+|+|||+++||.+|||++..++.+++
T Consensus 245 ~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~dda~l~~v~si~mR 324 (583)
T KOG2454|consen 245 VGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICDDADLSHVASIAMR 324 (583)
T ss_pred cCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEeccccHHHHHHHHHh
Confidence 9998 999999985566788888999999999999999999998875 7999999999999999999999999999999
Q ss_pred hhc-CCCCccccCceEEEecCcCCcchHHHHHHHHHh
Q psy18173 152 SKC-DYPAACNAMETLLIHEDHFQGSFFTDVCKMFRD 187 (191)
Q Consensus 152 ~~~-~~GQ~C~s~~~v~V~~~i~~~~f~~~l~~~~~~ 187 (191)
|-| .+||.|++++|++||+++|| .|+.+|.++++.
T Consensus 325 GtfQSsGQNCiGiER~iv~k~~Yd-~~i~~l~~rv~s 360 (583)
T KOG2454|consen 325 GTFQSSGQNCIGIERFIVHKDIYD-AFIGQLTKRVKS 360 (583)
T ss_pred hhhhhcCCcccceeEEEEecchHH-HHHHHHHHHHHH
Confidence 999 89999999999999999999 999999887654
No 128
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-35 Score=253.70 Aligned_cols=188 Identities=43% Similarity=0.779 Sum_probs=181.1
Q ss_pred ccceeeecCCeeeEEEeecceeEEEEeCCCCchhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-Ce
Q psy18173 2 VLRRTRLADGLSLSQVTVPIGVLLVIFESRPDSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DA 80 (191)
Q Consensus 2 ~~~~~~~~~g~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~ 80 (191)
++..|..++|++++.++.|+||+++|++.+|+.|....+.||++||+||+|.++.+..|+..++++++++|+++|+| +.
T Consensus 96 v~~~~~~~nGL~i~~~rvPLGVigvIYEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i~~aL~~~~lP~~a 175 (417)
T COG0014 96 VIDGWTLPNGLQIYRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVIQEALEKAGLPADA 175 (417)
T ss_pred hhccccCCCCCEEEEEEccceEEEEEEecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHHHHHHHHcCCCHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred EEEecC--chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhcCCCC
Q psy18173 81 ISLVST--REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKCDYPA 158 (191)
Q Consensus 81 v~~l~~--~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~~~GQ 158 (191)
||+++. ++.+.++|..+..+|.|+++||....+.|.+++ ..|++..+-|+|++|||++||+|+|.+.++++|++..-
T Consensus 176 Vqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a-~vPVi~~~~G~CHiyvd~~ADld~A~~ii~nAKtqrPs 254 (417)
T COG0014 176 VQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA-TVPVIEHGVGNCHIYVDESADLDKALKIIVNAKTQRPS 254 (417)
T ss_pred hhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC-cCCEEecCcceEEEEecccCCHHHHHHHHHcccCCCCc
Confidence 999984 678899999999999999999999999999888 59999999999999999999999999999999999999
Q ss_pred ccccCceEEEecCcCCcchHHHHHHHHHhcCCC
Q psy18173 159 ACNAMETLLIHEDHFQGSFFTDVCKMFRDEGVN 191 (191)
Q Consensus 159 ~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~g~~ 191 (191)
.|++.+.++||+++++ +|+..|.+.|+++|++
T Consensus 255 ~CNA~EtLLVh~~ia~-~fLp~l~~~l~~~gve 286 (417)
T COG0014 255 VCNAAETLLVHRAIAK-SFLPKLANALQEAGVE 286 (417)
T ss_pred ccchHHHHHcCHHHHH-HhHHHHHHHHHhcCeE
Confidence 9999999999999999 9999999999999974
No 129
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=6.1e-34 Score=253.67 Aligned_cols=168 Identities=20% Similarity=0.273 Sum_probs=154.2
Q ss_pred EEeecceeEEEEeCC-CCchhHH-HHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-chHHH
Q psy18173 16 QVTVPIGVLLVIFES-RPDSLPQ-VAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-REEIS 91 (191)
Q Consensus 16 ~~~~PlGvv~~I~p~-~P~~~~~-~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~~~~~ 91 (191)
....|+|++..|+|| ||...+. .++.||++||+|+-||.++||+.+..-+++++ |+|+| +++|+++| +++++
T Consensus 232 ~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~----eAGvP~~~lqLLpG~G~tvG 307 (769)
T COG4230 232 LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLH----EAGVPPGVLQLLPGRGETVG 307 (769)
T ss_pred cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHH----HcCCChhhHHhcCCCCcccc
Confidence 357899999999999 9987775 68999999999999999999999999999887 69999 99999996 66788
Q ss_pred HHHhcCCCcCEEEeeCCHHHHHHHHHhc-----CCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCce
Q psy18173 92 DLLSMEKHIDLIIPRGSSDLVRSIQQKS-----QHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMET 165 (191)
Q Consensus 92 ~~l~~~~~v~~v~ftGs~~~~~~v~~~~-----~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~ 165 (191)
..|..|+++++|.||||++++|.|.++- ...|++.|.||.|.+|||.+|--|+++.+++.|+| .+||+|++.+.
T Consensus 308 a~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRv 387 (769)
T COG4230 308 AALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRV 387 (769)
T ss_pred hhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhh
Confidence 8888899999999999999999987653 25789999999999999999999999999999999 88999999999
Q ss_pred EEEecCcCCcchHHHHHHHHHhc
Q psy18173 166 LLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 166 v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|++++++| ..+++|+-.+.+.
T Consensus 388 LclQ~DvAd-~~l~mLKGAm~el 409 (769)
T COG4230 388 LCLQEDVAD-RILTMLKGAMAEL 409 (769)
T ss_pred hhhhhhHHH-HHHHHHHHHHHHh
Confidence 999999999 9999999888764
No 130
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=99.97 E-value=2.9e-31 Score=236.45 Aligned_cols=173 Identities=16% Similarity=0.184 Sum_probs=145.0
Q ss_pred eeEEEeecceeEEEEeCC-CCchhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCCCeEEEec--C-ch
Q psy18173 13 SLSQVTVPIGVLLVIFES-RPDSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQDAISLVS--T-RE 88 (191)
Q Consensus 13 ~~~~~~~PlGvv~~I~p~-~P~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlPg~v~~l~--~-~~ 88 (191)
..+.+++|+|++++|+|| ||.+.++.++.||++||++|+|||+.+|.++..+.+++.+++.+.-+.+.++++. + .+
T Consensus 105 ~~~~~~~P~Gvv~~I~p~N~P~l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~~p~~~~~~~~~vv~~~g~~~ 184 (422)
T cd07080 105 GGYIRAQPRGLVVHIIAGNVPLLPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADVDPNHPLTDSISVVYWPGGDA 184 (422)
T ss_pred CCeeEEcCCceEEEEccCCccccHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhcCCCCcccceEEEEEecCCch
Confidence 456788999999999999 9986678899999999999999999999999999998875432210116788873 4 44
Q ss_pred HHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCcc-CeEEEcCCC----CHHHHHHHHHHhhc-CCCCcccc
Q psy18173 89 EISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGI-CHVYVDKDA----DIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 89 ~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~-n~~iV~~da----dl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
+..+.+..++ |.|+||||+++++.|+++++..+.++|+||| +++|+++++ |++++++.++++++ ++||.|+|
T Consensus 185 ~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~s 262 (422)
T cd07080 185 ELEERILASA--DAVVAWGGEEAVKAIRSLLPPGCRLIDFGPKYSFAVIDREALESEKLAEVADALAEDICRYDQQACSS 262 (422)
T ss_pred HHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCCCeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHHHHhhhhccC
Confidence 4555554455 9999999999999999888755678899999 556666679 99999999999999 99999999
Q ss_pred CceEEEecCc---CCcchHHHHHHHHHhc
Q psy18173 163 METLLIHEDH---FQGSFFTDVCKMFRDE 188 (191)
Q Consensus 163 ~~~v~V~~~i---~~~~f~~~l~~~~~~~ 188 (191)
++++|||+++ +| +|.++|.+++++.
T Consensus 263 p~~v~V~~~~~~~~~-~f~~~l~~~l~~~ 290 (422)
T cd07080 263 PQVVFVEKDDDEELR-EFAEALAAALERL 290 (422)
T ss_pred CeEEEEECCCCchHH-HHHHHHHHHHHHH
Confidence 9999999999 88 9999999988764
No 131
>KOG2455|consensus
Probab=99.96 E-value=5.1e-30 Score=223.26 Aligned_cols=173 Identities=17% Similarity=0.186 Sum_probs=146.4
Q ss_pred CCeeeEEEeecc-eeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEec
Q psy18173 10 DGLSLSQVTVPI-GVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVS 85 (191)
Q Consensus 10 ~g~~~~~~~~Pl-Gvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~ 85 (191)
.+..-...|.|+ |.|.+|+|| |-.... ...++||+ ||+|+||||..+.++++.+.++++ |||+| |++|+++
T Consensus 186 ~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLM-GN~VLwkPS~ta~lssYii~~il~----EAGlP~GvinFvP 260 (561)
T KOG2455|consen 186 KGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAALSSYIIYRILR----EAGLPPGVINFVP 260 (561)
T ss_pred CCCCcceeeccccceeEEecccceeeeccccccChhhh-cceeeecccchhHHHHHHHHHHHH----HcCCCccceeecc
Confidence 344445678898 999999999 553333 24566776 999999999999999999999886 79999 9999999
Q ss_pred -CchHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC--------CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-C
Q psy18173 86 -TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--------HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-D 155 (191)
Q Consensus 86 -~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~--------~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~ 155 (191)
++...++.+..+|++.++.||||.++.+.+-++-+ -.+++.|.||||.-+||++||+|.++...++|+| .
T Consensus 261 ad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey 340 (561)
T KOG2455|consen 261 ADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEY 340 (561)
T ss_pred CCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhh
Confidence 46667788888999999999999998887654321 2457899999999999999999999999999999 8
Q ss_pred CCCccccCceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 156 YPAACNAMETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 156 ~GQ~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+||.|++.+|+||+++.+. .+.++|.++-++.
T Consensus 341 ~GQkcsA~SRmYvp~s~wp-~i~e~l~~~~~q~ 372 (561)
T KOG2455|consen 341 QGQKCSACSRMYVPESLWP-QIREELVEEHSQL 372 (561)
T ss_pred cccccchhhhcccchhhcH-HHHHHHHHHHhhc
Confidence 9999999999999999997 8888887665554
No 132
>KOG2453|consensus
Probab=99.96 E-value=1.1e-30 Score=221.75 Aligned_cols=178 Identities=20% Similarity=0.244 Sum_probs=157.4
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.|..+.+++-|+|+|++|+.| ||..-. +..++|+.+||+|+|||++++|+++....+++.+.|++-.+| +.....+|
T Consensus 143 pghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG 222 (507)
T KOG2453|consen 143 PGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG 222 (507)
T ss_pred CchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc
Confidence 344566789999999999999 995444 678899999999999999999999999999999999999999 65666667
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhc--CCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccC
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS--QHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAM 163 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~--~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~ 163 (191)
..+..+.+..+.+++.+.||||+.+++.+.+.- .--+.++|+||||+.||.+|||+..++...++++. .+||+|+..
T Consensus 223 ~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~ 302 (507)
T KOG2453|consen 223 GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTT 302 (507)
T ss_pred chhhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhh
Confidence 777777777789999999999999999876542 23456789999999999999999999999999999 999999999
Q ss_pred ceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
+|+++|+++|| +.+++|++.+.+.
T Consensus 303 rrl~~hesvyd-~vlerlkkayaq~ 326 (507)
T KOG2453|consen 303 RRLIVHESVYD-QVLERLKKAYAQF 326 (507)
T ss_pred hHHHhhHHHHH-HHHHHHHHHHHhe
Confidence 99999999999 9999999988765
No 133
>KOG4165|consensus
Probab=99.95 E-value=8.9e-28 Score=203.37 Aligned_cols=190 Identities=71% Similarity=1.108 Sum_probs=179.3
Q ss_pred CccceeeecCCeeeEEEeecceeEEEEeCCCCchhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-C
Q psy18173 1 RVLRRTRLADGLSLSQVTVPIGVLLVIFESRPDSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-D 79 (191)
Q Consensus 1 ~~~~~~~~~~g~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g 79 (191)
|++..++.++|+..+....|+|+.++|....|...+...+.|+++||.+++|...++..++..+.+++++++.+.|.| +
T Consensus 92 RVl~~~~ladgL~L~qvt~PiGvLLVIFESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~al~~~~~~~~ 171 (433)
T KOG4165|consen 92 RVLKKTRLADGLELEQVTVPIGVLLVIFESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQEALGTHGGPGK 171 (433)
T ss_pred hheeeeeccCCceEEEeeccceEEEEEeccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHHHhhhccCchh
Confidence 578888999999999999999999999999998788878899999999999999999999999999999999999999 9
Q ss_pred eEEEecCchHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhcCCCCc
Q psy18173 80 AISLVSTREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKCDYPAA 159 (191)
Q Consensus 80 ~v~~l~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~~~GQ~ 159 (191)
.+|++..++++.+++..++.||+|+.+||+...|+|.+... +|++....|.|++|||+|||+++|.+.+..+|.++.-.
T Consensus 172 aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk-IPVLGHA~GichvYvd~dad~~kA~riv~DaK~dYPAa 250 (433)
T KOG4165|consen 172 AVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK-IPVLGHAEGICHVYVDKDADLDKAKRIVRDAKCDYPAA 250 (433)
T ss_pred hhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc-CcccccccceeEEEeccccCHHHHHHHHhcccCCCchh
Confidence 99999998899999999999999999999999999987765 99999999999999999999999999999999999999
Q ss_pred cccCceEEEecCcCCcchHHHHHHHHHhcCCC
Q psy18173 160 CNAMETLLIHEDHFQGSFFTDVCKMFRDEGVN 191 (191)
Q Consensus 160 C~s~~~v~V~~~i~~~~f~~~l~~~~~~~g~~ 191 (191)
|++++.++||++.....|++.+...+++.|++
T Consensus 251 CNAmETLLIh~dl~~~~~~~~l~~~l~~~gVt 282 (433)
T KOG4165|consen 251 CNAMETLLIHKDLEQSPFFDDLINMLKEEGVT 282 (433)
T ss_pred hhhHHHHhccHhhhhcchHHHHHHHHHhcCeE
Confidence 99999999999865548999999999999974
No 134
>KOG2452|consensus
Probab=99.93 E-value=3.9e-26 Score=201.12 Aligned_cols=156 Identities=18% Similarity=0.187 Sum_probs=134.8
Q ss_pred CCeeeEEEeecceeEEEEeCC-CCchh-HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCCCeEEEecC-
Q psy18173 10 DGLSLSQVTVPIGVLLVIFES-RPDSL-PQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQDAISLVST- 86 (191)
Q Consensus 10 ~g~~~~~~~~PlGvv~~I~p~-~P~~~-~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlPg~v~~l~~- 86 (191)
+.-...+.++|+|||++|.|| ||.+. .|+.+.+|++-- .++++ +-|++++++|
T Consensus 553 n~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~~--------------~k~~e----------~sgvini~~gs 608 (881)
T KOG2452|consen 553 NRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQV--------------LKFAE----------LTGVVNVLPGS 608 (881)
T ss_pred CCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHHH--------------hhhhh----------hcceEEEecCC
Confidence 333456789999999999999 99544 488888887421 11222 3399999996
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC---CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCcccc
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNA 162 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~---~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s 162 (191)
++.+++.|+.||+++.|-||||+++|+.+++.++ .+++.+|+||+.|+||+.|||+++|++....+-| +.|..|++
T Consensus 609 gslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgencia 688 (881)
T KOG2452|consen 609 GSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIA 688 (881)
T ss_pred cchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhh
Confidence 6778899999999999999999999999998775 5889999999999999999999999999999999 89999999
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhcCC
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDEGV 190 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~g~ 190 (191)
..|++|.+||+| +|+++++++.+++.+
T Consensus 689 agr~fi~~sihd-~fv~~~vee~~~~~i 715 (881)
T KOG2452|consen 689 AGRLFVEDSIHD-EFVRRVVEEVRKMKV 715 (881)
T ss_pred hcceeehhhhhH-HHHHHHHHHHHhhcc
Confidence 999999999999 999999999998853
No 135
>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=99.49 E-value=1.1e-12 Score=116.47 Aligned_cols=172 Identities=17% Similarity=0.217 Sum_probs=135.9
Q ss_pred eEEEeecceeEEEEeCC-CCchhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCCCeEEEec--C-chH
Q psy18173 14 LSQVTVPIGVLLVIFES-RPDSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQDAISLVS--T-REE 89 (191)
Q Consensus 14 ~~~~~~PlGvv~~I~p~-~P~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlPg~v~~l~--~-~~~ 89 (191)
.+..+.|.|+++.|.|. -|...++.++.+|.+||..|+|.|++.+.....+.+.+.+...+.-+-..+.++. + ...
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l~~~i~v~~~~~~d~~ 160 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPLADSIAVVYWPGGDEE 160 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchhhhcEEEEEecCCchH
Confidence 45679999999999999 9988888899999999999999999999999999998877544332225677774 3 344
Q ss_pred HHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC-CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhc-CCCCccccCceEE
Q psy18173 90 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ-HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKC-DYPAACNAMETLL 167 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~GQ~C~s~~~v~ 167 (191)
..+.+. ...|+++.+||.++.+.+.+..+ .++.+.-+--....+++.+++++++++.+.+=.+ ..+|.|.|++.+|
T Consensus 161 ~~~~~~--~~~D~vv~wGgd~ti~~ir~~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~if 238 (399)
T PF05893_consen 161 LEEALS--QQADAVVAWGGDETIRAIRQPLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVIF 238 (399)
T ss_pred HHHHHH--HHCCEEEEeCCHHHHHHHHHHcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEEE
Confidence 555554 57899999999999999987654 4555554555677899999999999999988777 8899999999999
Q ss_pred EecC---cCCcchHHHHHHHHHhc
Q psy18173 168 IHED---HFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 168 V~~~---i~~~~f~~~l~~~~~~~ 188 (191)
|.++ -.+ +|.++|.++|+++
T Consensus 239 v~~g~~~~~~-~f~~~L~~~L~~~ 261 (399)
T PF05893_consen 239 VETGDGDSVE-EFAERLAEALERA 261 (399)
T ss_pred EECCCcccHH-HHHHHHHHHHHHH
Confidence 9943 222 6777776666543
No 136
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=98.15 E-value=9.8e-06 Score=80.93 Aligned_cols=104 Identities=13% Similarity=0.120 Sum_probs=74.4
Q ss_pred eecCCeeeEEEeecceeEEEEeCCCCchhH-HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEe
Q psy18173 7 RLADGLSLSQVTVPIGVLLVIFESRPDSLP-QVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLV 84 (191)
Q Consensus 7 ~~~~g~~~~~~~~PlGvv~~I~p~~P~~~~-~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l 84 (191)
+.+.|..-..+..|.|+++.|+||. ..+ ..+..||++||+|++||++.++. . .+.+| .+.+.+
T Consensus 1065 PGPTGEsN~L~l~~RG~vlcisp~~--~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~------~~~Lp~~~~~~~ 1129 (1208)
T PRK11905 1065 PGPTGESNLLSLHPRGRVLCVADTE--EALLRQLAAALATGNVAVVAADSGLAA-------A------LADLPGLVAARI 1129 (1208)
T ss_pred CCCCCcceeEEecCCceEEEECCcH--HHHHHHHHHHHHhCCEEEEeCCcccHH-------H------HHhCcccccccc
Confidence 3467777777899999999999994 334 36888999999999999998662 1 13467 444444
Q ss_pred cCchHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcC-----CCcEEEecC
Q psy18173 85 STREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ-----HIPVLGHAE 129 (191)
Q Consensus 85 ~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-----~~~~~~e~g 129 (191)
. ..+.+..+++|++|.|+||++..+.+.++-+ ..|++.|..
T Consensus 1130 ~----~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1130 D----WTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred c----cccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 2 1223455789999999999999997765432 355665553
No 137
>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster. The function of this family is unknown.
Probab=96.10 E-value=0.0059 Score=50.07 Aligned_cols=54 Identities=24% Similarity=0.297 Sum_probs=43.7
Q ss_pred CeEEEcCCCCHHHHHHHHHHhhcCCCCccccCceEEEecCcCCcchHHHHHHHHHh
Q psy18173 132 CHVYVDKDADIRKAIKIARDSKCDYPAACNAMETLLIHEDHFQGSFFTDVCKMFRD 187 (191)
Q Consensus 132 n~~iV~~dadl~~aa~~iv~~~~~~GQ~C~s~~~v~V~~~i~~~~f~~~l~~~~~~ 187 (191)
.-+||.+|.|++.|+..++.+--+ .-...+...++||+++.| +|+++++..|+.
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~-Pf~~~~VatVlVqEsire-efi~rvr~~m~p 59 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHN-PFAPGAVATVLVQESIRE-EFIERVRSRMKP 59 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhC-cccCCcEEEEEEeHHHHH-HHHHHHHHhCcc
Confidence 347999999999999999998542 222235677999999999 999999988764
No 138
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=88.62 E-value=1.3 Score=45.49 Aligned_cols=95 Identities=14% Similarity=0.119 Sum_probs=63.3
Q ss_pred ecCCeeeEEEeecceeEEEEeCCCCchhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC
Q psy18173 8 LADGLSLSQVTVPIGVLLVIFESRPDSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST 86 (191)
Q Consensus 8 ~~~g~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~ 86 (191)
.|.|.+-.....|-|.|+.+.+--. -....++.+|++||.+|+..++... ++ .+++| .+.+.+.-
T Consensus 1175 GPTGE~N~l~l~pRg~vLcl~~~~~-~~~~Ql~Aala~Gn~~v~~~~~~~~-------~~------~~~Lp~~v~~~v~~ 1240 (1318)
T PRK11809 1175 GPTGERNTYTLLPRERVLCLADTEQ-DALTQLAAVLAVGSQALWPDDALHR-------AL------VAALPAAVQARIQL 1240 (1318)
T ss_pred CCCCCcceeeccCCCcEEEeCCCHH-HHHHHHHHHHHhCCEEEEeCCchhH-------HH------HHhccHHHHhHhhh
Confidence 4667776778899999999988622 1224678899999999987554311 11 14678 77666531
Q ss_pred chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhc
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS 119 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~ 119 (191)
. ....+. +..+++|.|-|..+..+.+.++-
T Consensus 1241 ~--~~~~~~-~~~~~avl~~G~~~~l~~~~~~L 1270 (1318)
T PRK11809 1241 A--KDWQLA-DQPFDAVLFHGDSDQLRALCEQV 1270 (1318)
T ss_pred c--cccccc-cCCccEEEEeCCHHHHHHHHHHH
Confidence 1 112222 46799999999999777766543
No 139
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=77.79 E-value=54 Score=29.68 Aligned_cols=165 Identities=13% Similarity=0.094 Sum_probs=73.2
Q ss_pred cCCeeeEEEeecceeEEEEeCC----CCchhHHHHHHHHHhCCE--EEEeCCcccHHHHHHHHHHHHHHHHhcCCCCeEE
Q psy18173 9 ADGLSLSQVTVPIGVLLVIFES----RPDSLPQVAALALASANG--LLLKGGKEAFHSNKALMDVVKEALASVGAQDAIS 82 (191)
Q Consensus 9 ~~g~~~~~~~~PlGvv~~I~p~----~P~~~~~~~~~AL~aGN~--vi~Kps~~~~~t~~~~~~~~~~~l~~aGlPg~v~ 82 (191)
..|.....++.|+--|++..|- ||....+.+++|-.+|.. |+.-|.... -.+...+--++..+|.-.++.
T Consensus 95 ~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~----G~i~p~vL~Aa~~~Gv~evy~ 170 (412)
T PF00815_consen 95 EPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKD----GKINPAVLAAAHLAGVDEVYK 170 (412)
T ss_dssp ETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS----------HHHHHHHHHTT-SEEEE
T ss_pred cCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCcc----CCCCHHHHHHHHHcCCCEEEe
Confidence 4677788899999999999994 554444678899999864 445554431 011111122334565543322
Q ss_pred EecCc-hHHHH-HH--hcCCCcCEEEeeCCHHHHHHHHHhcCCCcE-EEecCccCeEEEcCCCCHHHHHHHHHHhhc-CC
Q psy18173 83 LVSTR-EEISD-LL--SMEKHIDLIIPRGSSDLVRSIQQKSQHIPV-LGHAEGICHVYVDKDADIRKAIKIARDSKC-DY 156 (191)
Q Consensus 83 ~l~~~-~~~~~-~l--~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~-~~e~gG~n~~iV~~dadl~~aa~~iv~~~~-~~ 156 (191)
+ |+ ..+.. .+ .+=|+||.|+==|..=+...=..-....-+ +..+..---+|-|++||.+..+.+++.=+= +.
T Consensus 171 v--GGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~ 248 (412)
T PF00815_consen 171 V--GGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGIDMIAGPSEVLVIADETANPEFVAADLLAQAEHDP 248 (412)
T ss_dssp ----HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES------EEEEEE-TTS-HHHHHHHHHHHHTT-T
T ss_pred c--ccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccCCCCCCCceEEEECCCCCHHHHHHHHHHHhccCC
Confidence 2 42 22222 22 224799999866665433321111111111 111222223567888999999988876433 22
Q ss_pred CCccccCceEEEecCcCCcchHHHHHHHHHh
Q psy18173 157 PAACNAMETLLIHEDHFQGSFFTDVCKMFRD 187 (191)
Q Consensus 157 GQ~C~s~~~v~V~~~i~~~~f~~~l~~~~~~ 187 (191)
.- .-++|-.|- ++.++..+++++
T Consensus 249 ~a-----~~vLvt~s~---~la~~V~~~v~~ 271 (412)
T PF00815_consen 249 DA-----QAVLVTTSE---ELAEAVEAEVER 271 (412)
T ss_dssp T------EEEEEES-H---HHHHHHHHHHHH
T ss_pred CC-----ceEEEECCH---HHHHHHHHHHHH
Confidence 22 234555541 666666666554
No 140
>PRK13769 histidinol dehydrogenase; Provisional
Probab=74.00 E-value=65 Score=28.73 Aligned_cols=161 Identities=12% Similarity=0.086 Sum_probs=87.6
Q ss_pred cCCeeeEEEeecceeEEEEeCC-CCchhHHHHHHHHHhCCEEEEe--CCcccHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q psy18173 9 ADGLSLSQVTVPIGVLLVIFES-RPDSLPQVAALALASANGLLLK--GGKEAFHSNKALMDVVKEALASVGAQDAISLVS 85 (191)
Q Consensus 9 ~~g~~~~~~~~PlGvv~~I~p~-~P~~~~~~~~~AL~aGN~vi~K--ps~~~~~t~~~~~~~~~~~l~~aGlPg~v~~l~ 85 (191)
.+|.....++.|+--+++..|. ||....+..++|-.+|..=|+= |... . ...+--++..+|.-. +..
T Consensus 82 ~~Gv~~g~~~~Pi~rvG~YVPa~~pStvLM~~iPAkvAGV~~Iv~~TPp~~-i------~p~vL~aa~~~Gv~e---Iy~ 151 (368)
T PRK13769 82 YGGVLRSVFWKPVRRAALYVPARYVSTLVMLAVPARAAGVEEIYVVTPPRG-V------TGELLAVAKELGVKG---VLA 151 (368)
T ss_pred CCCeEEEEEEeeeeeeEEEeccchHHHHHHhhccHhhcCCCeEEEeCCCCC-C------CHHHHHHHHHcCCCe---eec
Confidence 4677777889999999999998 8866667788999999764443 4421 1 111111233455433 333
Q ss_pred -Cc-hHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhcCCCCccccC
Q psy18173 86 -TR-EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKCDYPAACNAM 163 (191)
Q Consensus 86 -~~-~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~~~GQ~C~s~ 163 (191)
|+ ..+. .+....++|.|+=-|..-+...=.+.....-+=+-.|=..-+||-++||.+..+.+++.=+=+... .
T Consensus 152 vGGAQAIA-a~a~gt~VDkIvGPGN~yV~~AK~~v~g~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~~----a 226 (368)
T PRK13769 152 IGGPHGLA-YAVFHMGVDMVAGPGGLYVQAAKYVLSQYVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGPT----S 226 (368)
T ss_pred ccCHHHHH-HHhcCCCcCEEECCCcHHHHHHHHHHhCCcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCCC----C
Confidence 43 3333 333334899998777664433211111211111112223445666669999988887663322111 1
Q ss_pred ceEEEecCcCCcchHHHHHHHHHh
Q psy18173 164 ETLLIHEDHFQGSFFTDVCKMFRD 187 (191)
Q Consensus 164 ~~v~V~~~i~~~~f~~~l~~~~~~ 187 (191)
.-+++-.|- ++.++..+++++
T Consensus 227 ~~iLvT~s~---~la~~V~~~v~~ 247 (368)
T PRK13769 227 FAYLLSTDA---ELLKAAEEIYRR 247 (368)
T ss_pred cEEEEECCH---HHHHHHHHHHHH
Confidence 234554441 555665555543
No 141
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=68.91 E-value=76 Score=27.40 Aligned_cols=128 Identities=11% Similarity=0.112 Sum_probs=71.9
Q ss_pred hCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCCCeEEEec-Cch--------HHHHHHhcCCCcCEEEeeCC---H--H
Q psy18173 45 SANGLLLKGGKEAFHSNKALMDVVKEALASVGAQDAISLVS-TRE--------EISDLLSMEKHIDLIIPRGS---S--D 110 (191)
Q Consensus 45 aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlPg~v~~l~-~~~--------~~~~~l~~~~~v~~v~ftGs---~--~ 110 (191)
.|+.-++.-|- -++.. +... +.+.|+ |+-.++. |.+ +.-+++..||+++.|...+= . .
T Consensus 150 ~G~ValiSQSG--~l~~~-l~~~----~~~~gi-G~S~~VS~Gn~~~adv~~~d~L~yl~~Dp~T~~I~ly~E~~G~~~~ 221 (300)
T PLN00125 150 PGRIGIVSRSG--TLTYE-AVFQ----TTAVGL-GQSTCVGIGGDPFNGTNFVDCLEKFVKDPQTEGIILIGEIGGTAEE 221 (300)
T ss_pred CCcEEEEeCCc--cHHHH-HHHH----HHHcCC-CeEEEEEeCCCCCCCCCHHHHHHHHhhCCCCcEEEEEeccCCchHH
Confidence 57776665443 22222 2222 224555 4444454 433 34566667999999988543 2 3
Q ss_pred HHHHHHHhcC-CCcEEEecCccCeE-EE--cCCCCHHH---HHHHHHHhhc-CCCCccccCceEEEecCcCCcchHHHHH
Q psy18173 111 LVRSIQQKSQ-HIPVLGHAEGICHV-YV--DKDADIRK---AIKIARDSKC-DYPAACNAMETLLIHEDHFQGSFFTDVC 182 (191)
Q Consensus 111 ~~~~v~~~~~-~~~~~~e~gG~n~~-iV--~~dadl~~---aa~~iv~~~~-~~GQ~C~s~~~v~V~~~i~~~~f~~~l~ 182 (191)
.++++.+.+. .||++.--.|.... =. .-+..+.. --..+..+.| ++| +++.++.. ++.+.++
T Consensus 222 d~~~f~~aa~~~KPVV~lk~Grs~~~g~~~sHTGala~~~~G~~~~~~a~~rq~G--------vi~v~~~~--el~~~~~ 291 (300)
T PLN00125 222 DAAAFIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAG--------VTVVESPA--KIGVAML 291 (300)
T ss_pred HHHHHHHHhcCCCCEEEEEecCCCCCCCCccchhhhhcCCCCCHHHHHHHHHHCC--------CeEeCCHH--HHHHHHH
Confidence 6777766654 79988766666531 10 11122210 1124456667 777 45556653 6999999
Q ss_pred HHHHhcCC
Q psy18173 183 KMFRDEGV 190 (191)
Q Consensus 183 ~~~~~~g~ 190 (191)
+.+++.|.
T Consensus 292 ~~~~~~~~ 299 (300)
T PLN00125 292 EVFKERGL 299 (300)
T ss_pred HHHHhccC
Confidence 99988664
No 142
>PF04937 DUF659: Protein of unknown function (DUF 659); InterPro: IPR007021 These are transposase-like proteins with no known function.
Probab=66.17 E-value=5.2 Score=31.03 Aligned_cols=53 Identities=15% Similarity=0.318 Sum_probs=40.1
Q ss_pred ccHHHHHHHHHHHHHHHHhcCCCCeEEEecCc-h---HHHHHHhcCCCcCEEEeeCCHH
Q psy18173 56 EAFHSNKALMDVVKEALASVGAQDAISLVSTR-E---EISDLLSMEKHIDLIIPRGSSD 110 (191)
Q Consensus 56 ~~~~t~~~~~~~~~~~l~~aGlPg~v~~l~~~-~---~~~~~l~~~~~v~~v~ftGs~~ 110 (191)
....++..+++++.+..++.|--+++|++++. + .+..+|. .+...+++++..+
T Consensus 70 ~~~~~a~~l~~ll~~vIeeVG~~nVvqVVTDn~~~~~~a~~~L~--~k~p~ifw~~Caa 126 (153)
T PF04937_consen 70 SIIKTAEYLFELLDEVIEEVGEENVVQVVTDNASNMKKAGKLLM--EKYPHIFWTPCAA 126 (153)
T ss_pred cccccHHHHHHHHHHHHHHhhhhhhhHHhccCchhHHHHHHHHH--hcCCCEEEechHH
Confidence 35678899999999999998844999999952 2 2445554 4567789999876
No 143
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=64.07 E-value=34 Score=28.88 Aligned_cols=58 Identities=22% Similarity=0.292 Sum_probs=44.4
Q ss_pred CCCcCEEEeeCCHHHHHHHHHhcC--CCcEEE-ecCccCeEEEcCCCCHHHHHHHHHHhhc
Q psy18173 97 EKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLG-HAEGICHVYVDKDADIRKAIKIARDSKC 154 (191)
Q Consensus 97 ~~~v~~v~ftGs~~~~~~v~~~~~--~~~~~~-e~gG~n~~iV~~dadl~~aa~~iv~~~~ 154 (191)
...+|+++.-|+..+.+..++... .+|++. ..|-++.+-..+-.|++.++..++.+.+
T Consensus 74 ~~~~D~ii~lGGDGT~L~~~~~~~~~~~Pilgin~G~lgfl~~~~~~~~~~~l~~~~~g~~ 134 (285)
T PF01513_consen 74 EEGVDLIIVLGGDGTFLRAARLFGDYDIPILGINTGTLGFLTEFEPEDIEEALEKILAGEY 134 (285)
T ss_dssp CCCSSEEEEEESHHHHHHHHHHCTTST-EEEEEESSSSTSSSSEEGCGHHHHHHHHHHTHC
T ss_pred ccCCCEEEEECCCHHHHHHHHHhccCCCcEEeecCCCccccccCCHHHHHHHHHHHhcCCe
Confidence 478999999999999999988876 688764 4555555444455799999999999765
No 144
>PF08002 DUF1697: Protein of unknown function (DUF1697); InterPro: IPR012545 This family contains many hypothetical bacterial proteins.; PDB: 2HIY_B.
Probab=58.64 E-value=15 Score=27.77 Aligned_cols=50 Identities=14% Similarity=0.274 Sum_probs=26.5
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCchHHHHHHhcCC
Q psy18173 43 LASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTREEISDLLSMEK 98 (191)
Q Consensus 43 L~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~~~~~~~l~~~~ 98 (191)
|.+||.|+- ++.........+.+.+.+ +-|++ .++ +. ..++..+++..+|
T Consensus 40 i~SGNvvf~-~~~~~~~l~~~ie~~l~~---~fG~~v~v~-vr-s~~el~~i~~~nP 90 (137)
T PF08002_consen 40 IQSGNVVFE-SDRDPAELAAKIEKALEE---RFGFDVPVI-VR-SAEELRAIIAANP 90 (137)
T ss_dssp TTTTEEEEE-ESS-HHHHHHHHHHHHHH---H-TT---EE-EE-EHHHHHHHHTT--
T ss_pred EeeCCEEEe-cCCChHHHHHHHHHHHHH---hcCCCeEEE-Ee-eHHHHHHHHHHCC
Confidence 578998877 555556666666666664 56776 544 22 3344555555444
No 145
>PTZ00129 40S ribosomal protein S14; Provisional
Probab=54.89 E-value=92 Score=24.20 Aligned_cols=60 Identities=10% Similarity=-0.027 Sum_probs=44.1
Q ss_pred EEeecceeEEEEeCC-CCchhHHHHHHHHHhCCEEEEeCC----------cccHHHHHHHHHHHHHHHHhcCCCCe
Q psy18173 16 QVTVPIGVLLVIFES-RPDSLPQVAALALASANGLLLKGG----------KEAFHSNKALMDVVKEALASVGAQDA 80 (191)
Q Consensus 16 ~~~~PlGvv~~I~p~-~P~~~~~~~~~AL~aGN~vi~Kps----------~~~~~t~~~~~~~~~~~l~~aGlPg~ 80 (191)
....+.|++-+.+.| +...++.-. .||.++|..| ..+|+.++..++-+.+-+.+.|+..+
T Consensus 23 ~~~~~~Gi~hI~as~NNTiItiTD~-----~G~~~~w~SsG~~gfKg~r~KsTpyAAq~aa~~~a~k~~~~Gi~~v 93 (149)
T PTZ00129 23 KGELVFGVAHIFASFNDTFIHVTDL-----SGRETLVRVTGGMKVKADRDESSPYAAMMAAQDVAARCKELGINAL 93 (149)
T ss_pred CCceeEEEEEEEcccCCeEEEEEcc-----cCCEEEEEecCcceecccccCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 345678999999999 776665322 5887777653 56789999888877777778888744
No 146
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=54.32 E-value=19 Score=28.01 Aligned_cols=42 Identities=17% Similarity=0.325 Sum_probs=27.7
Q ss_pred HHHhcCCC-CeEEEecC-chHHHHHHhc---CCCcCEEEeeCCHHHH
Q psy18173 71 ALASVGAQ-DAISLVST-REEISDLLSM---EKHIDLIIPRGSSDLV 112 (191)
Q Consensus 71 ~l~~aGlP-g~v~~l~~-~~~~~~~l~~---~~~v~~v~ftGs~~~~ 112 (191)
.|++.|.. -...++++ .+...+.+.. ..+.|.|+.||++..+
T Consensus 30 ~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVIttGGtg~g 76 (163)
T TIGR02667 30 RLTEAGHRLADRAIVKDDIYQIRAQVSAWIADPDVQVILITGGTGFT 76 (163)
T ss_pred HHHHCCCeEEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCcCCC
Confidence 34578886 66777775 4444444432 2578999999998643
No 147
>COG0521 MoaB Molybdopterin biosynthesis enzymes [Coenzyme metabolism]
Probab=54.18 E-value=35 Score=27.04 Aligned_cols=45 Identities=24% Similarity=0.472 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhcCCC-CeEEEecC-chHH----HHHHhcCCCcCEEEeeCCHH
Q psy18173 64 LMDVVKEALASVGAQ-DAISLVST-REEI----SDLLSMEKHIDLIIPRGSSD 110 (191)
Q Consensus 64 ~~~~~~~~l~~aGlP-g~v~~l~~-~~~~----~~~l~~~~~v~~v~ftGs~~ 110 (191)
-.+++.+.|+++|.- ....++++ .+.. .+++. .. +|.|+.||++.
T Consensus 28 sG~~l~~~L~~ag~~~~~~~iV~D~~~~I~~~l~~~~~-~~-~DvvlttGGTG 78 (169)
T COG0521 28 SGPLLVELLEEAGHNVAAYTIVPDDKEQIRATLIALID-ED-VDVVLTTGGTG 78 (169)
T ss_pred chhHHHHHHHHcCCccceEEEeCCCHHHHHHHHHHHhc-CC-CCEEEEcCCcc
Confidence 455566667789886 78888985 3322 33333 34 99999999995
No 148
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=52.14 E-value=1.9e+02 Score=26.39 Aligned_cols=163 Identities=14% Similarity=0.126 Sum_probs=87.1
Q ss_pred ecCCeeeEEEeecceeEEEEeC---C-CCchhHHHHHHHHHhCCE--EEEeCCcc---cHHHHHHHHHHHHHHHHhcCCC
Q psy18173 8 LADGLSLSQVTVPIGVLLVIFE---S-RPDSLPQVAALALASANG--LLLKGGKE---AFHSNKALMDVVKEALASVGAQ 78 (191)
Q Consensus 8 ~~~g~~~~~~~~PlGvv~~I~p---~-~P~~~~~~~~~AL~aGN~--vi~Kps~~---~~~t~~~~~~~~~~~l~~aGlP 78 (191)
..+|...-.++.|+--|++..| . ||....+..++|-.+|+. |+.-|.+. .|.+ + -+...+|+-
T Consensus 104 ~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~avPAkvAGv~~Iv~~tPp~~~gv~p~i---L-----~AA~~~Gv~ 175 (425)
T COG0141 104 TEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVVVTPPPKDGVNPEI---L-----AAARLAGVD 175 (425)
T ss_pred ccCCcEEEEEEEEhhheEEEccCCCcCChHHHHHhhccHhhcCCceEEEECCCCCCCCCHHH---H-----HHHHHhCcH
Confidence 3566667788999999999999 5 776566778899999985 34444443 2221 1 112234433
Q ss_pred CeEEEecCc-hHHHHH-H--hcCCCcCEEEeeCCHHHHHHHHHhcCCCcE-EEecCccCeEEEcCCCCHHHHHHHHHHhh
Q psy18173 79 DAISLVSTR-EEISDL-L--SMEKHIDLIIPRGSSDLVRSIQQKSQHIPV-LGHAEGICHVYVDKDADIRKAIKIARDSK 153 (191)
Q Consensus 79 g~v~~l~~~-~~~~~~-l--~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~-~~e~gG~n~~iV~~dadl~~aa~~iv~~~ 153 (191)
.++++ |+ ..+..+ + .+=|.||.|+==|+.-+...=..-....-+ +..+...--+|-|++||.+..+.+++.=+
T Consensus 176 eIy~v--GGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQA 253 (425)
T COG0141 176 EVYKV--GGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSGVVGIDMIAGPSEVLVIADETANPDFVAADLLSQA 253 (425)
T ss_pred HHHHc--cCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhCCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 22222 32 222221 1 112789999866665433321011111111 11122222356677799999998887643
Q ss_pred cCCCCccccCceEEEecCcCCcchHHHHHHHHHh
Q psy18173 154 CDYPAACNAMETLLIHEDHFQGSFFTDVCKMFRD 187 (191)
Q Consensus 154 ~~~GQ~C~s~~~v~V~~~i~~~~f~~~l~~~~~~ 187 (191)
=+.-. .+-++|-.|- ++.++..+++++
T Consensus 254 EHd~~----a~aiLvT~s~---~la~~v~~~v~~ 280 (425)
T COG0141 254 EHDPD----AQAILVTDSE---ELAEAVEAAVER 280 (425)
T ss_pred hcCCC----ceEEEEeCcH---HHHHHHHHHHHH
Confidence 32111 1235665542 666666655544
No 149
>PF11009 DUF2847: Protein of unknown function (DUF2847); InterPro: IPR022551 Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018 from TIGRFAMS), is described as thioredoxin reductase-like. ; PDB: 3IV4_A.
Probab=51.72 E-value=55 Score=23.85 Aligned_cols=41 Identities=12% Similarity=0.049 Sum_probs=25.1
Q ss_pred hCCEEEEeCCcccHHHHHHHHHHHHHHHHhc-C-CC-CeEEEecC
Q psy18173 45 SANGLLLKGGKEAFHSNKALMDVVKEALASV-G-AQ-DAISLVST 86 (191)
Q Consensus 45 aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~a-G-lP-g~v~~l~~ 86 (191)
.+..+|||.|..+|.++..+-++= +.+.+. + +| ..+.++..
T Consensus 19 ~~~~~iFKHSt~C~IS~~a~~~~e-~~~~~~~~~~~~y~l~v~~~ 62 (105)
T PF11009_consen 19 EKPVLIFKHSTRCPISAMALREFE-KFWEESPDEIPVYYLDVIEY 62 (105)
T ss_dssp -SEEEEEEE-TT-HHHHHHHHHHH-HHHHHHT----EEEEEGGGG
T ss_pred cCcEEEEEeCCCChhhHHHHHHHH-HHhhcCCccceEEEEEEEeC
Confidence 577899999999999999887653 333332 2 67 66666654
No 150
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators. The periplasmic binding proteins are the primary receptors for chemotaxis and transport of many sugar based solutes. The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain (lacI) [, ].; PDB: 1BAP_A 7ABP_A 6ABP_A 1ABF_A 5ABP_A 2WRZ_B 9ABP_A 1APB_A 1ABE_A 8ABP_A ....
Probab=46.36 E-value=1.6e+02 Score=24.40 Aligned_cols=64 Identities=17% Similarity=0.238 Sum_probs=39.1
Q ss_pred EEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC---c----hHHHHHHhcCCCcCEEEeeCCHHHHHH
Q psy18173 49 LLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST---R----EEISDLLSMEKHIDLIIPRGSSDLVRS 114 (191)
Q Consensus 49 vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~---~----~~~~~~l~~~~~v~~v~ftGs~~~~~~ 114 (191)
.++-.+.... +...=.+=+.+++.++|+| .-..+..+ . +.+.+++..+|.+|+| |+++...+.-
T Consensus 123 ~~i~~~~~~~-~~~~R~~Gy~~Al~~~Gl~~~~~~i~~~~~~~~~g~~~~~~ll~~~p~idai-~~~nd~~A~g 194 (279)
T PF00532_consen 123 AFIGGPEDSS-TSRERLQGYRDALKEAGLPIDEEWIFEGDFDYESGYEAARELLESHPDIDAI-FCANDMMAIG 194 (279)
T ss_dssp EEEEESTTTH-HHHHHHHHHHHHHHHTTSCEEEEEEEESSSSHHHHHHHHHHHHHTSTT-SEE-EESSHHHHHH
T ss_pred EEEecCcchH-HHHHHHHHHHHHHHHcCCCCCcccccccCCCHHHHHHHHHHHHhhCCCCEEE-EEeCHHHHHH
Confidence 3444333333 4454455678899999998 55555542 1 2357888989999965 5556654443
No 151
>PRK14046 malate--CoA ligase subunit beta; Provisional
Probab=41.60 E-value=2.5e+02 Score=25.06 Aligned_cols=17 Identities=12% Similarity=0.141 Sum_probs=11.1
Q ss_pred EcCCCCHHHHHHHHHHh
Q psy18173 136 VDKDADIRKAIKIARDS 152 (191)
Q Consensus 136 V~~dadl~~aa~~iv~~ 152 (191)
++.+-|++.|++.++..
T Consensus 368 vf~~~~~~~a~~~~v~~ 384 (392)
T PRK14046 368 IITADTLAEAAEKAVEA 384 (392)
T ss_pred eeecCCHHHHHHHHHHH
Confidence 34445788888777753
No 152
>KOG4764|consensus
Probab=40.55 E-value=23 Score=23.77 Aligned_cols=21 Identities=14% Similarity=0.234 Sum_probs=16.8
Q ss_pred cCcCCcchHHHHHHHHHhcCCC
Q psy18173 170 EDHFQGSFFTDVCKMFRDEGVN 191 (191)
Q Consensus 170 ~~i~~~~f~~~l~~~~~~~g~~ 191 (191)
.++-| +|..+|+++|+++|.+
T Consensus 48 d~veD-DFS~QLkaELek~g~k 68 (70)
T KOG4764|consen 48 DDVED-DFSNQLKAELEKKGHK 68 (70)
T ss_pred cchhh-HHHHHHHHHHHhcccc
Confidence 34545 8999999999999863
No 153
>KOG3239|consensus
Probab=39.21 E-value=58 Score=26.05 Aligned_cols=48 Identities=21% Similarity=0.287 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHHHhhcCCCCcccc----CceEEEecCcCCcchHHHHHHHHHhc
Q psy18173 139 DADIRKAIKIARDSKCDYPAACNA----METLLIHEDHFQGSFFTDVCKMFRDE 188 (191)
Q Consensus 139 dadl~~aa~~iv~~~~~~GQ~C~s----~~~v~V~~~i~~~~f~~~l~~~~~~~ 188 (191)
|.|+..|++.... +|.+|-+-+. -+.|.|+.++.| +..+.+.+.+.+.
T Consensus 126 dIdlk~aaK~fa~-KFAtGaSVtk~a~kkdEIvIQGDv~d-Di~d~I~ekw~ev 177 (193)
T KOG3239|consen 126 DIDLKKAAKFFAQ-KFATGASVTKNAEKKDEIVIQGDVKD-DIFDFIPEKWPEV 177 (193)
T ss_pred cccHHHHHHHHHH-hhccCccccCCCCccceEEEeccchH-HHHHHHHHhcccC
Confidence 4678887765544 7888877777 889999999998 8777777666554
No 154
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.17 E-value=88 Score=28.29 Aligned_cols=54 Identities=20% Similarity=0.141 Sum_probs=41.0
Q ss_pred CC-chhHHHHHHHHHhC-----CEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC--CeEEEe
Q psy18173 31 RP-DSLPQVAALALASA-----NGLLLKGGKEAFHSNKALMDVVKEALASVGAQ--DAISLV 84 (191)
Q Consensus 31 ~P-~~~~~~~~~AL~aG-----N~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP--g~v~~l 84 (191)
+| .++....+-++..| |.-++=+++-.|-=+--...+++++|+++|++ .++.+=
T Consensus 50 ~P~~ltiG~lid~~~~g~~d~~n~~vlmt~TgGpCRfgnYi~~~rkaLk~aG~~~V~visLn 111 (420)
T COG3581 50 LPAILTIGQLIDAIESGEYDIENDAVLMTQTGGPCRFGNYIELLRKALKDAGFRDVPVISLN 111 (420)
T ss_pred chhhhhHHHHHHHHHhCCccccccEEEEecCCCCcchhhHHHHHHHHHHHcCCCCCcEEEee
Confidence 78 44555677799999 88888888777766656667889999999997 555553
No 155
>COG0683 LivK ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism]
Probab=36.71 E-value=2.4e+02 Score=24.40 Aligned_cols=143 Identities=15% Similarity=0.111 Sum_probs=73.4
Q ss_pred ceeEEEEeCC-CCchhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC-c---hHHHHHH
Q psy18173 21 IGVLLVIFES-RPDSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST-R---EEISDLL 94 (191)
Q Consensus 21 lGvv~~I~p~-~P~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~-~---~~~~~~l 94 (191)
-||.++|.+| .+... .+.+.....+.+++-|+..++.. ...+.. +++.+... . ....+++
T Consensus 77 ~~V~~vvG~~~S~~~~--a~~~v~~~~~i~~i~p~st~~~~------------~~~~~~~~vfr~~~~~~~q~~~~~~~l 142 (366)
T COG0683 77 DGVDAVVGPTTSGVAL--AASPVAEEAGVPLISPSATAPQL------------TGRGLKPNVFRTGPTDNQQAAAAADYL 142 (366)
T ss_pred cCceEEEEeccCcccc--cchhhHhhcCceEEeecCCCCcc------------cccccccceEEecCChHHHHHHHHHHH
Confidence 4788888888 55322 23346677888899998777631 134454 57777663 1 2234555
Q ss_pred hcCCCcCEEEeeCCH-HHHHHHHHhcCCCcEEEecCcc---CeEEEcCCCCHHHHHHHHHHhhcCCCCccccCceEEEec
Q psy18173 95 SMEKHIDLIIPRGSS-DLVRSIQQKSQHIPVLGHAEGI---CHVYVDKDADIRKAIKIARDSKCDYPAACNAMETLLIHE 170 (191)
Q Consensus 95 ~~~~~v~~v~ftGs~-~~~~~v~~~~~~~~~~~e~gG~---n~~iV~~dadl~~aa~~iv~~~~~~GQ~C~s~~~v~V~~ 170 (191)
......+.+.+.++. ..++.+.+.. +..+.+.|++ ...+...+-|....+..+..+. ++.|++..
T Consensus 143 ~~~~~~k~v~ii~~~~~yg~~~~~~~--~~~l~~~G~~~~~~~~~~~~~~~~~~~v~~i~~~~---------~d~v~~~~ 211 (366)
T COG0683 143 VKKGGKKRVAIIGDDYAYGEGLADAF--KAALKALGGEVVVEEVYAPGDTDFSALVAKIKAAG---------PDAVLVGG 211 (366)
T ss_pred HHhcCCcEEEEEeCCCCcchhHHHHH--HHHHHhCCCeEEEEEeeCCCCCChHHHHHHHHhcC---------CCEEEECC
Confidence 434444466665544 3444433221 2223344554 1234444455555555544431 33445443
Q ss_pred CcCCcchHHHHHHHHHhcCCC
Q psy18173 171 DHFQGSFFTDVCKMFRDEGVN 191 (191)
Q Consensus 171 ~i~~~~f~~~l~~~~~~~g~~ 191 (191)
. .+ + .-.+.+.++++|++
T Consensus 212 ~-~~-~-~~~~~r~~~~~G~~ 229 (366)
T COG0683 212 Y-GP-D-AALFLRQAREQGLK 229 (366)
T ss_pred C-Cc-c-chHHHHHHHHcCCC
Confidence 3 33 3 33345666777653
No 156
>PRK09607 rps11p 30S ribosomal protein S11P; Reviewed
Probab=36.48 E-value=71 Score=24.28 Aligned_cols=63 Identities=8% Similarity=-0.040 Sum_probs=41.2
Q ss_pred eecceeEEEEeCC-CCchhHHHH----HHHHHhCCEEEEeCC-cccHHHHHHHHHHHHHHHHhcCCCCe
Q psy18173 18 TVPIGVLLVIFES-RPDSLPQVA----ALALASANGLLLKGG-KEAFHSNKALMDVVKEALASVGAQDA 80 (191)
Q Consensus 18 ~~PlGvv~~I~p~-~P~~~~~~~----~~AL~aGN~vi~Kps-~~~~~t~~~~~~~~~~~l~~aGlPg~ 80 (191)
.++.|++-+.+.| +...++.-. ..+-.+|-.+.+|.+ ..+|+.++..++-+.+.+.+.|+..+
T Consensus 6 ~~~~gi~hI~as~NNTivtvTD~~G~~~~~~~S~G~~g~kg~kK~TpyAAq~aae~~~~~~~~~Gi~~v 74 (132)
T PRK09607 6 KEKWGIAHIYASFNNTIITITDLTGAETIAKSSGGMVVKADRDESSPYAAMQAAEKAAEDAKEKGITGV 74 (132)
T ss_pred CceeeEEEEEcccCCeEEEEEcCCCCEEEEEecCcceeeCCCccCCHHHHHHHHHHHHHHHHHcCCcEE
Confidence 4578999999999 766555211 112233334444544 56899999999888777778887743
No 157
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=35.76 E-value=3.4e+02 Score=24.73 Aligned_cols=164 Identities=15% Similarity=0.113 Sum_probs=85.3
Q ss_pred cCCeeeEEEeecceeEEEEeCC--CC--chhHHHHHHHHHhCCE--EEEeCCcccHHHHHHHHHHHHHHHHhcCCCCeEE
Q psy18173 9 ADGLSLSQVTVPIGVLLVIFES--RP--DSLPQVAALALASANG--LLLKGGKEAFHSNKALMDVVKEALASVGAQDAIS 82 (191)
Q Consensus 9 ~~g~~~~~~~~PlGvv~~I~p~--~P--~~~~~~~~~AL~aGN~--vi~Kps~~~~~t~~~~~~~~~~~l~~aGlPg~v~ 82 (191)
.+|...-.++.|+--|++..|. .| ....+..++|-.+|.. ++.-|..... +...+--++..+|.-.++.
T Consensus 109 ~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~g~-----i~p~vL~AA~~~Gv~eIy~ 183 (425)
T PRK00877 109 APGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPPPDGE-----INPAILAAAALAGVDEVYK 183 (425)
T ss_pred cCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCCCCCC-----CCHHHHHHHHHcCCCeeec
Confidence 4677777899999999999997 45 3334678899999975 4444543111 1111112233455443222
Q ss_pred EecCc-hHHHHH-H--hcCCCcCEEEeeCCHHHHHHHHHhcCCCcE-EEecCccCeEEEcCCCCHHHHHHHHHHhhcCCC
Q psy18173 83 LVSTR-EEISDL-L--SMEKHIDLIIPRGSSDLVRSIQQKSQHIPV-LGHAEGICHVYVDKDADIRKAIKIARDSKCDYP 157 (191)
Q Consensus 83 ~l~~~-~~~~~~-l--~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~-~~e~gG~n~~iV~~dadl~~aa~~iv~~~~~~G 157 (191)
+ |+ ..+..+ + .+=|+||.|+=-|..=+...=..-....-+ +..+..---+|-|++||.+..+.+++.=+=+..
T Consensus 184 v--GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~ 261 (425)
T PRK00877 184 V--GGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGVVGIDMIAGPSEILVIADETADPDFVAADLLSQAEHDP 261 (425)
T ss_pred c--CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcCCcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 2 43 222222 1 335799999877765433321111111111 111222223556777999999988876433222
Q ss_pred CccccCceEEEecCcCCcchHHHHHHHHH
Q psy18173 158 AACNAMETLLIHEDHFQGSFFTDVCKMFR 186 (191)
Q Consensus 158 Q~C~s~~~v~V~~~i~~~~f~~~l~~~~~ 186 (191)
. ..-++|-.|- ++.++..++++
T Consensus 262 ~----a~aiLvT~s~---~la~~V~~~v~ 283 (425)
T PRK00877 262 D----AQSILVTTSE---ELAEAVAAEVE 283 (425)
T ss_pred C----CcEEEEECCH---HHHHHHHHHHH
Confidence 1 1234554441 45555544443
No 158
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=34.26 E-value=27 Score=26.58 Aligned_cols=43 Identities=30% Similarity=0.495 Sum_probs=26.9
Q ss_pred HHHhcCCC-CeEEEecC-chHHHHHHhc---CCCcCEEEeeCCHHHHH
Q psy18173 71 ALASVGAQ-DAISLVST-REEISDLLSM---EKHIDLIIPRGSSDLVR 113 (191)
Q Consensus 71 ~l~~aGlP-g~v~~l~~-~~~~~~~l~~---~~~v~~v~ftGs~~~~~ 113 (191)
.|.+.|.. ....++.+ .+...+.+.. ..+.|.|+.||++..++
T Consensus 28 ~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~~~DlVittGG~s~g~ 75 (152)
T cd00886 28 LLEEAGHEVVAYEIVPDDKDEIREALIEWADEDGVDLILTTGGTGLAP 75 (152)
T ss_pred HHHHcCCeeeeEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCcCCCC
Confidence 34578876 66667775 4444444332 22689999999986433
No 159
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=34.24 E-value=2.5e+02 Score=22.75 Aligned_cols=160 Identities=16% Similarity=0.182 Sum_probs=82.3
Q ss_pred eecceeEEEEeCCCCchhHHHHHHHHHhCCEEEEeCC-cccH------------HHHHHHHHHHHHHHHhcCCC---CeE
Q psy18173 18 TVPIGVLLVIFESRPDSLPQVAALALASANGLLLKGG-KEAF------------HSNKALMDVVKEALASVGAQ---DAI 81 (191)
Q Consensus 18 ~~PlGvv~~I~p~~P~~~~~~~~~AL~aGN~vi~Kps-~~~~------------~t~~~~~~~~~~~l~~aGlP---g~v 81 (191)
..|.-+.++|.|+-|...-+ +-.|=+.|.-|++--. +-.. .+...+.+.+..++.+ +| |+-
T Consensus 18 ~Lp~pvT~ai~P~~~~~~~~-a~~a~~~G~EvllhlPMep~~~~~~gp~~L~~~~~~~~i~~~l~~al~~--vp~a~Gvn 94 (213)
T PF04748_consen 18 ALPFPVTFAILPYAPYSREW-AERARAAGHEVLLHLPMEPKGYKDPGPGALLTGMSEEEIRKRLEAALAR--VPGAVGVN 94 (213)
T ss_dssp CSSTTCEEEEETTSTTHHHH-HHHHHHCT-EEEEEEEE--TTTT---TT-B-TTS-HHHHHHHHHHHHCC--STT-SEEE
T ss_pred hCCCCeEEEECCCCCChHHH-HHHHHHcCCEEEEeCCCCCCCCCCcccccccCCCCHHHHHHHHHHHHHH--CCCcEEEe
Confidence 46888999999997754433 3346788999988622 1111 5566677777777765 56 544
Q ss_pred EEecC-----chHHHHHHhcCCCcCEEEe---eCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhh
Q psy18173 82 SLVST-----REEISDLLSMEKHIDLIIP---RGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSK 153 (191)
Q Consensus 82 ~~l~~-----~~~~~~~l~~~~~v~~v~f---tGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~ 153 (191)
|-.-+ .+....+|..=.+=.+.++ |-+..++..+++.. +.|.. .+-+++|.+.|.+...+.+-...
T Consensus 95 NhmGS~~T~~~~~m~~vl~~l~~~gl~FvDS~T~~~s~a~~~A~~~-gvp~~-----~rdvfLD~~~~~~~I~~ql~~~~ 168 (213)
T PF04748_consen 95 NHMGSRFTSDREAMRWVLEVLKERGLFFVDSRTTPRSVAPQVAKEL-GVPAA-----RRDVFLDNDQDEAAIRRQLDQAA 168 (213)
T ss_dssp EEE-CCHHC-HHHHHHHHHHHHHTT-EEEE-S--TT-SHHHHHHHC-T--EE-----E-SEETTST-SHHHHHHHHHHHH
T ss_pred cCCCccccCCHHHHHHHHHHHHHcCCEEEeCCCCcccHHHHHHHHc-CCCEE-----eeceecCCCCCHHHHHHHHHHHH
Confidence 44322 1222333321111133333 55555666666555 35554 34578888888777766665544
Q ss_pred c--CCCCccccCceEEEecCcCCcchHHHHHHHHHhcCC
Q psy18173 154 C--DYPAACNAMETLLIHEDHFQGSFFTDVCKMFRDEGV 190 (191)
Q Consensus 154 ~--~~GQ~C~s~~~v~V~~~i~~~~f~~~l~~~~~~~g~ 190 (191)
. ...+.++++-+.+ ..-. +++++...++++.|+
T Consensus 169 ~~A~~~G~aI~Igh~~--p~Tl--~~L~~~~~~l~~~gi 203 (213)
T PF04748_consen 169 RIARKQGSAIAIGHPR--PETL--EALEEWLPELEAQGI 203 (213)
T ss_dssp HHHHCCSEEEEEEE-S--CCHH--HHHHHHHHHHHHCTE
T ss_pred HhhhhcCcEEEEEcCC--HHHH--HHHHHHHhHHhhCCE
Confidence 3 2333444333221 1111 456666667777776
No 160
>PRK13770 histidinol dehydrogenase; Provisional
Probab=33.46 E-value=3.7e+02 Score=24.45 Aligned_cols=139 Identities=11% Similarity=0.097 Sum_probs=76.6
Q ss_pred eeecCCeeeEEEeecceeEEEEeCC--CC--chhHHHHHHHHHhCCEEEE--eCCcc---cHHHHHHHHHHHHHHHHhcC
Q psy18173 6 TRLADGLSLSQVTVPIGVLLVIFES--RP--DSLPQVAALALASANGLLL--KGGKE---AFHSNKALMDVVKEALASVG 76 (191)
Q Consensus 6 ~~~~~g~~~~~~~~PlGvv~~I~p~--~P--~~~~~~~~~AL~aGN~vi~--Kps~~---~~~t~~~~~~~~~~~l~~aG 76 (191)
|...+|.....++.|+--|++..|- +| ....+.+++|-.+|..=|+ -|... .|.+ + -+...+|
T Consensus 96 ~~~~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~i---L-----~Aa~~~G 167 (416)
T PRK13770 96 QQLEESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEV---L-----AACYITQ 167 (416)
T ss_pred eEecCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCHHH---H-----HHHHHcC
Confidence 4446677777889999999999996 45 4334678899999986444 45432 1221 1 1223455
Q ss_pred CCCeEEEecCc-hHHHHH-H--hcCCCcCEEEeeCCHHHHHHHHHhcCCCcE-EEecCccCeEEEcCCCCHHHHHHHHHH
Q psy18173 77 AQDAISLVSTR-EEISDL-L--SMEKHIDLIIPRGSSDLVRSIQQKSQHIPV-LGHAEGICHVYVDKDADIRKAIKIARD 151 (191)
Q Consensus 77 lPg~v~~l~~~-~~~~~~-l--~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~-~~e~gG~n~~iV~~dadl~~aa~~iv~ 151 (191)
.-.++.+ |+ ..+..+ + .+=|+||.|+==|..=+...=.......-+ +..+..---+|-|++||.+..+.+++.
T Consensus 168 v~eIy~i--GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLa 245 (416)
T PRK13770 168 VNQVFQV--GGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQIAGPTEIALIIDETADLDAIVYDVFA 245 (416)
T ss_pred CCeeecc--CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCCcCcCCCCCCceeEEEecCCCCHHHHHHHHHH
Confidence 4432222 42 222221 1 335799999866655433321111111111 112222333566778999999988876
Q ss_pred hhc
Q psy18173 152 SKC 154 (191)
Q Consensus 152 ~~~ 154 (191)
=+=
T Consensus 246 QAE 248 (416)
T PRK13770 246 QAE 248 (416)
T ss_pred Hhc
Confidence 433
No 161
>PRK05928 hemD uroporphyrinogen-III synthase; Reviewed
Probab=33.40 E-value=2.4e+02 Score=22.27 Aligned_cols=124 Identities=10% Similarity=0.010 Sum_probs=63.3
Q ss_pred CEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC----CeEEEecC-chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhc--
Q psy18173 47 NGLLLKGGKEAFHSNKALMDVVKEALASVGAQ----DAISLVST-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS-- 119 (191)
Q Consensus 47 N~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP----g~v~~l~~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~-- 119 (191)
+.++.+|++... .+.+. |.+.|.- .++++.+. .......+......|.|+||-..++-. +.+..
T Consensus 3 ~ilitr~~~~~~----~l~~~----l~~~G~~v~~~p~~~~~~~~~~~~~~~~~~~~~~d~iiftS~~av~~-~~~~~~~ 73 (249)
T PRK05928 3 KILVTRPSPKAE----ELVEL----LRELGFVALHFPLIEIEPGRQLPQLAAQLAALGADWVIFTSKNAVEF-LLSALKK 73 (249)
T ss_pred EEEEeCCHHHHH----HHHHH----HHHcCCCEEEeccEEEecCCCcChHHHHhhCCCCCEEEEECHHHHHH-HHHHHHh
Confidence 345666665332 23333 4467773 34555442 111123333356799999996555433 33321
Q ss_pred ------CCCcEE----------EecCccCeEEEcCCCCHHHHHHHHHHhhcCCCCccccCceEEEecCcCCcchHHHHHH
Q psy18173 120 ------QHIPVL----------GHAEGICHVYVDKDADIRKAIKIARDSKCDYPAACNAMETLLIHEDHFQGSFFTDVCK 183 (191)
Q Consensus 120 ------~~~~~~----------~e~gG~n~~iV~~dadl~~aa~~iv~~~~~~GQ~C~s~~~v~V~~~i~~~~f~~~l~~ 183 (191)
...+++ .+.| ..+.++.++.+.+..+..+.... ...+++++.++-. -.+.|.+
T Consensus 74 ~~~~~~~~~~~~avG~~Ta~~l~~~G-~~~~~~~~~~~~~~l~~~l~~~~-------~~~~~ili~~~~~---~~~~l~~ 142 (249)
T PRK05928 74 KKLKWPKNKKYAAIGEKTALALKKLG-GKVVFVPEDGESSELLLELPELL-------LKGKRVLYLRGNG---GREVLGD 142 (249)
T ss_pred cCcCCCCCCEEEEECHHHHHHHHHcC-CCccccCCCCcChHHHHhChhhh-------cCCCEEEEECCCC---CHHHHHH
Confidence 123332 2343 33445556666666555544421 2235677777643 2556777
Q ss_pred HHHhcCC
Q psy18173 184 MFRDEGV 190 (191)
Q Consensus 184 ~~~~~g~ 190 (191)
.+++.|+
T Consensus 143 ~L~~~G~ 149 (249)
T PRK05928 143 TLEERGA 149 (249)
T ss_pred HHHHCCC
Confidence 7777775
No 162
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=31.90 E-value=82 Score=22.21 Aligned_cols=44 Identities=16% Similarity=0.229 Sum_probs=30.0
Q ss_pred HhcCCC-CeEEEecCchHHHHHHhcCCCcCEEEeeCCHHHHHHHH
Q psy18173 73 ASVGAQ-DAISLVSTREEISDLLSMEKHIDLIIPRGSSDLVRSIQ 116 (191)
Q Consensus 73 ~~aGlP-g~v~~l~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 116 (191)
.+.|++ ..=++++....+..++..+...+.+.+.|+...-..+.
T Consensus 52 ~~~Gi~~~~~~i~ts~~~~~~~l~~~~~~~~v~vlG~~~l~~~l~ 96 (101)
T PF13344_consen 52 KKLGIPVDEDEIITSGMAAAEYLKEHKGGKKVYVLGSDGLREELR 96 (101)
T ss_dssp HHTTTT--GGGEEEHHHHHHHHHHHHTTSSEEEEES-HHHHHHHH
T ss_pred HhcCcCCCcCEEEChHHHHHHHHHhcCCCCEEEEEcCHHHHHHHH
Confidence 468888 55566665555667777667788999999887666553
No 163
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=31.03 E-value=4.3e+02 Score=24.40 Aligned_cols=80 Identities=23% Similarity=0.394 Sum_probs=47.9
Q ss_pred HHHHHHHHHhcCCCCeEEEecCchHHHHHHhcCCCcCEEEe------eCCHHHHHHHHHhcCCCcEEEecCccCeEEEcC
Q psy18173 65 MDVVKEALASVGAQDAISLVSTREEISDLLSMEKHIDLIIP------RGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDK 138 (191)
Q Consensus 65 ~~~~~~~l~~aGlPg~v~~l~~~~~~~~~l~~~~~v~~v~f------tGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~ 138 (191)
-+++.++|...|+. +....+..+..+++..+ .++.|+. ..+-.+-+.+.+.....|++.- ..
T Consensus 17 r~~l~~~L~~~G~~--v~~a~~~~~al~~i~~~-~~~lvl~Di~mp~~~Gl~ll~~i~~~~~~~pVI~~---------Tg 84 (464)
T COG2204 17 RELLEQALELAGYE--VVTAESAEEALEALSES-PFDLVLLDIRMPGMDGLELLKEIKSRDPDLPVIVM---------TG 84 (464)
T ss_pred HHHHHHHHHHcCCe--EEEeCCHHHHHHHHhcC-CCCEEEEecCCCCCchHHHHHHHHhhCCCCCEEEE---------eC
Confidence 44555666666643 22333455566777655 5666654 2334566666665556776643 34
Q ss_pred CCCHHHHHHHHHHhhcCC
Q psy18173 139 DADIRKAIKIARDSKCDY 156 (191)
Q Consensus 139 dadl~~aa~~iv~~~~~~ 156 (191)
..|++.|++.+-.|+|+.
T Consensus 85 ~g~i~~AV~A~k~GA~Df 102 (464)
T COG2204 85 HGDIDTAVEALRLGAFDF 102 (464)
T ss_pred CCCHHHHHHHHhcCccee
Confidence 468888888888887763
No 164
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=30.32 E-value=62 Score=25.82 Aligned_cols=45 Identities=13% Similarity=0.248 Sum_probs=30.4
Q ss_pred cHHHHHHHHHHHHHHHHhcCCCCeEEEecC--------chHHHHHHhcCCCcCEEEe
Q psy18173 57 AFHSNKALMDVVKEALASVGAQDAISLVST--------REEISDLLSMEKHIDLIIP 105 (191)
Q Consensus 57 ~~~t~~~~~~~~~~~l~~aGlPg~v~~l~~--------~~~~~~~l~~~~~v~~v~f 105 (191)
|+++...+.+++.++-.+ .++-++.+ ++.+-..+..||+|+.+-.
T Consensus 36 T~lsG~elV~lIk~a~~D----PV~VMfDD~G~~g~G~GE~Al~~v~~h~~IeVLG~ 88 (180)
T PF14097_consen 36 TPLSGEELVELIKQAPHD----PVLVMFDDKGFIGEGPGEQALEYVANHPDIEVLGA 88 (180)
T ss_pred CcCCHHHHHHHHHhCCCC----CEEEEEeCCCCCCCCccHHHHHHHHcCCCceEEEE
Confidence 789999999999853111 67777752 1334455666999987654
No 165
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=30.18 E-value=45 Score=25.14 Aligned_cols=44 Identities=20% Similarity=0.399 Sum_probs=26.4
Q ss_pred HHHHhcCCC-CeEEEecC-chHHHHHHhc-CCCcCEEEeeCCHHHHH
Q psy18173 70 EALASVGAQ-DAISLVST-REEISDLLSM-EKHIDLIIPRGSSDLVR 113 (191)
Q Consensus 70 ~~l~~aGlP-g~v~~l~~-~~~~~~~l~~-~~~v~~v~ftGs~~~~~ 113 (191)
+.|++.|.. -...++.+ .+...+.+.. ..+.|.|+.||++..++
T Consensus 34 ~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~DliIttGG~g~g~ 80 (144)
T TIGR00177 34 ALLEEAGFNVSRLGIVPDDPEEIREILRKAVDEADVVLTTGGTGVGP 80 (144)
T ss_pred HHHHHCCCeEEEEeecCCCHHHHHHHHHHHHhCCCEEEECCCCCCCC
Confidence 334567765 44555554 3444444332 24799999999987553
No 166
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=29.54 E-value=1.1e+02 Score=25.94 Aligned_cols=38 Identities=24% Similarity=0.425 Sum_probs=25.1
Q ss_pred HHhcCCC-CeEEEecC-chHH-HHHHhcCCCcCEEEeeCCH
Q psy18173 72 LASVGAQ-DAISLVST-REEI-SDLLSMEKHIDLIIPRGSS 109 (191)
Q Consensus 72 l~~aGlP-g~v~~l~~-~~~~-~~~l~~~~~v~~v~ftGs~ 109 (191)
|.+.|++ --+.++.+ .+.. ..+-....+.|.|++||+-
T Consensus 30 L~~~G~~v~~~~~VgD~~~~I~~~l~~a~~r~D~vI~tGGL 70 (255)
T COG1058 30 LTELGVDLARITTVGDNPDRIVEALREASERADVVITTGGL 70 (255)
T ss_pred HHhcCceEEEEEecCCCHHHHHHHHHHHHhCCCEEEECCCc
Confidence 4478999 77777775 3333 2222334569999999986
No 167
>PLN02926 histidinol dehydrogenase
Probab=29.20 E-value=4.5e+02 Score=24.05 Aligned_cols=162 Identities=13% Similarity=0.118 Sum_probs=86.3
Q ss_pred cCCeeeEEEeecceeEEEEeCC--CC--chhHHHHHHHHHhCCE--EEEeCCcc--cHHHHHHHHHHHHHHHHhcCCCCe
Q psy18173 9 ADGLSLSQVTVPIGVLLVIFES--RP--DSLPQVAALALASANG--LLLKGGKE--AFHSNKALMDVVKEALASVGAQDA 80 (191)
Q Consensus 9 ~~g~~~~~~~~PlGvv~~I~p~--~P--~~~~~~~~~AL~aGN~--vi~Kps~~--~~~t~~~~~~~~~~~l~~aGlPg~ 80 (191)
.+|.....++.|+.-|++..|. +| ...++.+++|-.+|.. ++.-|... ...... ++ ++..+|+-.+
T Consensus 109 ~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~i-L~-----AA~~~Gv~eI 182 (431)
T PLN02926 109 MPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRKDGSICPEV-LY-----CAKKAGVTHI 182 (431)
T ss_pred CCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCCcCCCCCHHH-HH-----HHHHcCCCee
Confidence 4677778899999999999997 55 3333668889999875 55556532 111111 11 2234554432
Q ss_pred EEEecCc-hHHHHH-H--hcCCCcCEEEeeCCHHHHHHHHHhcCCC---cEEEecCc--cCeEEEcCCCCHHHHHHHHHH
Q psy18173 81 ISLVSTR-EEISDL-L--SMEKHIDLIIPRGSSDLVRSIQQKSQHI---PVLGHAEG--ICHVYVDKDADIRKAIKIARD 151 (191)
Q Consensus 81 v~~l~~~-~~~~~~-l--~~~~~v~~v~ftGs~~~~~~v~~~~~~~---~~~~e~gG--~n~~iV~~dadl~~aa~~iv~ 151 (191)
+.+ |+ ..+..+ + .+=|++|.|+=-|..-+...=.... +. --+-..-| ---+|-|++||.+.++.+++.
T Consensus 183 y~v--GGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~-G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLa 259 (431)
T PLN02926 183 LKA--GGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQ-NSEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLS 259 (431)
T ss_pred ecc--CCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhh-CCCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHH
Confidence 222 43 222222 1 3347999998777664433211111 12 11111122 223556777999999988876
Q ss_pred hhcCCCCccccCceEEEecCcCCcchHHHHHHHHH
Q psy18173 152 SKCDYPAACNAMETLLIHEDHFQGSFFTDVCKMFR 186 (191)
Q Consensus 152 ~~~~~GQ~C~s~~~v~V~~~i~~~~f~~~l~~~~~ 186 (191)
=+=+... ..-++|-.+- ++.++..++++
T Consensus 260 QAEHdp~----a~aiLvT~s~---~la~~V~~~v~ 287 (431)
T PLN02926 260 QAEHGPD----SQVVLVAVGD---VDLDAIEEEVE 287 (431)
T ss_pred HhccCCC----CcEEEEECCH---HHHHHHHHHHH
Confidence 4332221 1234554442 45555544443
No 168
>PF00994 MoCF_biosynth: Probable molybdopterin binding domain; InterPro: IPR001453 Eukaryotic and prokaryotic molybdoenzymes require a molybdopterin cofactor (MoCF) for their activity. The biosynthesis of this cofactor involves a complex multistep enzymatic pathway. One of the eukaryotic proteins involved in this pathway is the Drosophila protein cinnamon [] which is highly similar to gephyrin, a rat microtubule-associated protein which was thought to anchor the glycine receptor to subsynaptic microtubules. Cinnamon and gephyrin are evolutionary related, in their N-terminal half, to the Escherichia coli MoCF biosynthesis proteins mog/chlG and moaB/chlA2 and, in their C-terminal half, to E. coli moeA/chlE.; GO: 0006777 Mo-molybdopterin cofactor biosynthetic process; PDB: 3TCR_B 1O8O_B 1O8Q_G 1EAV_D 1O8N_C 1UUX_A 1UUY_A 2G2C_A 2G4R_C 3K6A_F ....
Probab=28.94 E-value=61 Score=24.15 Aligned_cols=41 Identities=22% Similarity=0.371 Sum_probs=25.2
Q ss_pred HHHHhcCCC-CeEEEecC-chHHHHHHhc-CCCcCEEEeeCCHH
Q psy18173 70 EALASVGAQ-DAISLVST-REEISDLLSM-EKHIDLIIPRGSSD 110 (191)
Q Consensus 70 ~~l~~aGlP-g~v~~l~~-~~~~~~~l~~-~~~v~~v~ftGs~~ 110 (191)
+.|++.|+. ....++++ .+...+.+.. -.+.|.|+.||++.
T Consensus 24 ~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~D~VittGG~g 67 (144)
T PF00994_consen 24 ALLEELGIEVIRYGIVPDDPDAIKEALRRALDRADLVITTGGTG 67 (144)
T ss_dssp HHHHHTTEEEEEEEEEESSHHHHHHHHHHHHHTTSEEEEESSSS
T ss_pred HHHHHcCCeeeEEEEECCCHHHHHHHHHhhhccCCEEEEcCCcC
Confidence 344568876 55667775 4444444321 13459999999875
No 169
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=28.11 E-value=4.5e+02 Score=23.73 Aligned_cols=138 Identities=13% Similarity=0.112 Sum_probs=75.6
Q ss_pred cCCeeeEEEeecceeEEEEeCC--CC--chhHHHHHHHHHhCCE--EEEeCCcc--cHHHHHHHHHHHHHHHHhcCCCCe
Q psy18173 9 ADGLSLSQVTVPIGVLLVIFES--RP--DSLPQVAALALASANG--LLLKGGKE--AFHSNKALMDVVKEALASVGAQDA 80 (191)
Q Consensus 9 ~~g~~~~~~~~PlGvv~~I~p~--~P--~~~~~~~~~AL~aGN~--vi~Kps~~--~~~t~~~~~~~~~~~l~~aGlPg~ 80 (191)
.+|.....++.|+--|++..|. .| ....+..++|-.+|.. |+.-|... ...... ++ ++..+|.-.+
T Consensus 77 ~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~i-L~-----AA~~~Gv~eI 150 (393)
T TIGR00069 77 EPGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAV-LA-----AAKLAGVDEV 150 (393)
T ss_pred CCCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHH-HH-----HHHHcCCCee
Confidence 5677777899999999999997 55 3333668889999875 44455432 111111 11 2234554332
Q ss_pred EEEecCc-hHHHHH-H--hcCCCcCEEEeeCCHHHHHHHHHhcCCCcE-EEecCccCeEEEcCCCCHHHHHHHHHHhhc
Q psy18173 81 ISLVSTR-EEISDL-L--SMEKHIDLIIPRGSSDLVRSIQQKSQHIPV-LGHAEGICHVYVDKDADIRKAIKIARDSKC 154 (191)
Q Consensus 81 v~~l~~~-~~~~~~-l--~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~-~~e~gG~n~~iV~~dadl~~aa~~iv~~~~ 154 (191)
+.+ |+ ..+..+ + .+=|+||.|+=-|..-+...=..-....-+ +..+..---+|-|++||.+..+.+++.=+=
T Consensus 151 y~v--GGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAE 227 (393)
T TIGR00069 151 YKV--GGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFGDVGIDMPAGPSEVLVIADETANPEFVAADLLSQAE 227 (393)
T ss_pred hhc--CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhc
Confidence 222 43 222221 1 335799999877766443321111111111 112222233566777999999988876433
No 170
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=27.75 E-value=4.8e+02 Score=23.86 Aligned_cols=139 Identities=14% Similarity=0.109 Sum_probs=76.0
Q ss_pred cCCeeeEEEeecceeEEEEeCC--CC--chhHHHHHHHHHhCCE--EEEeCCcccHHHHHHHHHHHHHHHHhcCCCCeEE
Q psy18173 9 ADGLSLSQVTVPIGVLLVIFES--RP--DSLPQVAALALASANG--LLLKGGKEAFHSNKALMDVVKEALASVGAQDAIS 82 (191)
Q Consensus 9 ~~g~~~~~~~~PlGvv~~I~p~--~P--~~~~~~~~~AL~aGN~--vi~Kps~~~~~t~~~~~~~~~~~l~~aGlPg~v~ 82 (191)
.+|.....++.|+--|++..|- +| ...++.+++|-.+|.. |+.-|....-..-..++ ++..+|.-.++.
T Consensus 104 ~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-----Aa~~~Gv~eIy~ 178 (426)
T PRK12447 104 LPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-----AMHLAGADEIYV 178 (426)
T ss_pred CCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-----HHHHcCCCeehh
Confidence 4677777899999999999996 45 4334678889999975 44445432101111111 223455433222
Q ss_pred EecCc-hHHHHH-H--hcCCCcCEEEeeCCHHHHHHHHHhcCCCcE-EEecCccCeEEEcCCCCHHHHHHHHHHhhc
Q psy18173 83 LVSTR-EEISDL-L--SMEKHIDLIIPRGSSDLVRSIQQKSQHIPV-LGHAEGICHVYVDKDADIRKAIKIARDSKC 154 (191)
Q Consensus 83 ~l~~~-~~~~~~-l--~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~-~~e~gG~n~~iV~~dadl~~aa~~iv~~~~ 154 (191)
+ |+ ..+..+ + .+=|+||.|+=-|..-+...=..-.+..-+ +..+..---+|-|++||.+..+.+++.=+=
T Consensus 179 v--GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAE 253 (426)
T PRK12447 179 L--GGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFGRVGIDLFAGPTETLVIADDTADPELVATDLLGQAE 253 (426)
T ss_pred c--CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhc
Confidence 2 43 222222 1 335799999877766443321111111111 112222223566777999999988876433
No 171
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=26.99 E-value=1.4e+02 Score=21.28 Aligned_cols=72 Identities=17% Similarity=0.258 Sum_probs=41.8
Q ss_pred eeEEEEeCC-CCchhHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC--chHHHHHHhcC
Q psy18173 22 GVLLVIFES-RPDSLPQVAALALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST--REEISDLLSME 97 (191)
Q Consensus 22 Gvv~~I~p~-~P~~~~~~~~~AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~--~~~~~~~l~~~ 97 (191)
|+.+.+... -+.+..+.-... ..|-.++ .|+.|+.++. +.|+| ..+.-+++ .....+++. +
T Consensus 1 ~i~isv~d~~K~~~~~~a~~l~-~~G~~i~-----AT~gTa~~L~--------~~Gi~~~~v~~~~~~g~~~i~~~i~-~ 65 (112)
T cd00532 1 GVFLSVSDHVKAMLVDLAPKLS-SDGFPLF-----ATGGTSRVLA--------DAGIPVRAVSKRHEDGEPTVDAAIA-E 65 (112)
T ss_pred CEEEEEEcccHHHHHHHHHHHH-HCCCEEE-----ECcHHHHHHH--------HcCCceEEEEecCCCCCcHHHHHHh-C
Confidence 344455555 443333211112 5577776 3556655543 57998 66665553 345677776 6
Q ss_pred -CCcCEEEeeCC
Q psy18173 98 -KHIDLIIPRGS 108 (191)
Q Consensus 98 -~~v~~v~ftGs 108 (191)
.++++|++|-+
T Consensus 66 ~g~idlVIn~~~ 77 (112)
T cd00532 66 KGKFDVVINLRD 77 (112)
T ss_pred CCCEEEEEEcCC
Confidence 79999999754
No 172
>PF02887 PK_C: Pyruvate kinase, alpha/beta domain; InterPro: IPR015795 Pyruvate kinase (2.7.1.40 from EC) (PK) catalyses the final step in glycolysis [], the conversion of phosphoenolpyruvate to pyruvate with concomitant phosphorylation of ADP to ATP: ADP + phosphoenolpyruvate = ATP + pyruvate The enzyme, which is found in all living organisms, requires both magnesium and potassium ions for its activity. In vertebrates, there are four tissue-specific isozymes: L (liver), R (red cells), M1 (muscle, heart and brain), and M2 (early foetal tissue). In plants, PK exists as cytoplasmic and plastid isozymes, while most bacteria and lower eukaryotes have one form, except in certain bacteria, such as Escherichia coli, that have two isozymes. All isozymes appear to be tetramers of identical subunits of ~500 residues. PK helps control the rate of glycolysis, along with phosphofructokinase (IPR000023 from INTERPRO) and hexokinase (IPR001312 from INTERPRO). PK possesses allosteric sites for numerous effectors, yet the isozymes respond differently, in keeping with their different tissue distributions []. The activity of L-type (liver) PK is increased by fructose-1,6-bisphosphate (F1,6BP) and lowered by ATP and alanine (gluconeogenic precursor), therefore when glucose levels are high, glycolysis is promoted, and when levels are low, gluconeogenesis is promoted. L-type PK is also hormonally regulated, being activated by insulin and inhibited by glucagon, which covalently modifies the PK enzyme. M1-type (muscle, brain) PK is inhibited by ATP, but F1,6BP and alanine have no effect, which correlates with the function of muscle and brain, as opposed to the liver. The structure of several pyruvate kinases from various organisms have been determined [, ]. The protein comprises three-four domains: a small N-terminal helical domain (absent in bacterial PK), a beta/alpha-barrel domain, a beta-barrel domain (inserted within the beta/alpha-barrel domain), and a 3-layer alpha/beta/alpha sandwich domain. This entry represents the 3-layer alpha/beta/alpha sandwich domain. This domain has a similar topology to the archaeal hypothetical protein, MTH1675 from Methanobacterium thermoautotrophicum.; PDB: 3QTG_B 1VP8_A 1T57_C 3N25_A 1AQF_C 2G50_B 1F3X_G 1A5U_F 1A49_E 1F3W_C ....
Probab=26.29 E-value=2.5e+02 Score=20.07 Aligned_cols=64 Identities=14% Similarity=0.181 Sum_probs=41.0
Q ss_pred CeEEEec-CchHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCC-CHHHHHHHHHHh
Q psy18173 79 DAISLVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDA-DIRKAIKIARDS 152 (191)
Q Consensus 79 g~v~~l~-~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~da-dl~~aa~~iv~~ 152 (191)
..|-+++ .+.....+-...|.+.-+.+|-+..+.|++.-. =|--|+++.+.. |.+...+..+.-
T Consensus 18 k~Ivv~T~sG~ta~~isk~RP~~pIiavt~~~~~~r~l~l~----------~GV~p~~~~~~~~~~~~~~~~a~~~ 83 (117)
T PF02887_consen 18 KAIVVFTESGRTARLISKYRPKVPIIAVTPNESVARQLSLY----------WGVYPVLIEEFDKDTEELIAEALEY 83 (117)
T ss_dssp SEEEEE-SSSHHHHHHHHT-TSSEEEEEESSHHHHHHGGGS----------TTEEEEECSSHSHSHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHhhCCCCeEEEEcCcHHHHhhhhcc----------cceEEEEeccccccHHHHHHHHHHH
Confidence 5566666 455555555667999999999999999986422 244555555555 666666665543
No 173
>COG1540 Uncharacterized proteins, homologs of lactam utilization protein B [General function prediction only]
Probab=26.28 E-value=57 Score=27.39 Aligned_cols=60 Identities=15% Similarity=0.314 Sum_probs=39.5
Q ss_pred CeEEEcCCCCHHHHHHHHHHhhc-C-CC-CccccCceEEEecCcCCc-chHHHHHHHHHhcCCC
Q psy18173 132 CHVYVDKDADIRKAIKIARDSKC-D-YP-AACNAMETLLIHEDHFQG-SFFTDVCKMFRDEGVN 191 (191)
Q Consensus 132 n~~iV~~dadl~~aa~~iv~~~~-~-~G-Q~C~s~~~v~V~~~i~~~-~f~~~l~~~~~~~g~~ 191 (191)
++++-++..-++++...+-.++. . .| ..-+..+.|+||.+-... +|.++++++|++.|++
T Consensus 184 gA~i~d~~~a~~qvl~m~~~g~v~a~dG~~v~v~adsiCvHGD~p~Al~~~~riR~~l~~~gi~ 247 (252)
T COG1540 184 GAVIHDEEEALAQVLQMVREGKVTAIDGEWVAVEADSICVHGDNPHALAFARRIRAALEAEGIK 247 (252)
T ss_pred CccccCHHHHHHHHHHHHhcCceEeeCCcEEeeecceEEEcCCCHHHHHHHHHHHHHHHHcCCe
Confidence 34444444444444444445555 2 34 567788999999985321 6999999999999974
No 174
>COG1206 Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis]
Probab=25.73 E-value=5e+02 Score=23.42 Aligned_cols=111 Identities=17% Similarity=0.279 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhcCCC--CeEEEec-C-chHHHHHHhcCCCcCE--------------EEeeC---CHHHHHHHHHhcC
Q psy18173 62 KALMDVVKEALASVGAQ--DAISLVS-T-REEISDLLSMEKHIDL--------------IIPRG---SSDLVRSIQQKSQ 120 (191)
Q Consensus 62 ~~~~~~~~~~l~~aGlP--g~v~~l~-~-~~~~~~~l~~~~~v~~--------------v~ftG---s~~~~~~v~~~~~ 120 (191)
..+..++-++.+++-+| |.+-+=- + ...+.+.+..||-|.. |+-|| |...+.++.+...
T Consensus 74 R~lgSlii~~Ad~~~VPAGgALAVDR~~Fs~~vT~~l~~hpli~vireEvt~iP~dg~~vIATGPLTs~~La~~i~~ltG 153 (439)
T COG1206 74 RLLGSLIIEAADKHRVPAGGALAVDRDGFSQAVTEKLENHPLIEVIREEVTEIPPDGITVIATGPLTSDALAEKIKELTG 153 (439)
T ss_pred HHhhhHHhhhhhhccCCCCceeeecHhHHHHHHHHHHhcCCCEEEEccccccCCCCCcEEEecCCCCCHHHHHHHHHhhC
Confidence 34556677777888899 6676643 3 3456677777876543 34455 5567777765543
Q ss_pred CCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhcCCCC----ccccCceEEEecCcCCcchHHHHHH
Q psy18173 121 HIPVLGHAEGICHVYVDKDADIRKAIKIARDSKCDYPA----ACNAMETLLIHEDHFQGSFFTDVCK 183 (191)
Q Consensus 121 ~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~~~GQ----~C~s~~~v~V~~~i~~~~f~~~l~~ 183 (191)
.-.+.---...|.|..++.|+|++ -..|+++.|. .|- ..++-|+ .|++.|.+
T Consensus 154 -~d~l~FyDAaAPIi~~dSIdmd~~---~~~sRYdKg~a~YiNCP------mtkEey~-~F~eaL~~ 209 (439)
T COG1206 154 -EDYLYFYDAAAPIIEFDSIDMDKA---YLKSRYDKGEADYINCP------MTKEEYL-AFYEALIE 209 (439)
T ss_pred -CceEEeecccCceeeccccchHHH---HhhhccccccchhhcCC------CCHHHHH-HHHHHHHh
Confidence 222222345778888889999986 3456775442 332 1356666 78888765
No 175
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=25.71 E-value=1.6e+02 Score=22.99 Aligned_cols=39 Identities=26% Similarity=0.495 Sum_probs=25.2
Q ss_pred HHhcCCC-CeEEEecC-chHHHHHHh-cCCCcCEEEeeCCHH
Q psy18173 72 LASVGAQ-DAISLVST-REEISDLLS-MEKHIDLIIPRGSSD 110 (191)
Q Consensus 72 l~~aGlP-g~v~~l~~-~~~~~~~l~-~~~~v~~v~ftGs~~ 110 (191)
|.+.|+. ..+.++.+ .+...+.+. ...+.|.|+.||+..
T Consensus 28 L~~~G~~v~~~~~v~Dd~~~I~~~l~~~~~~~dlVIttGG~G 69 (170)
T cd00885 28 LAELGIEVYRVTVVGDDEDRIAEALRRASERADLVITTGGLG 69 (170)
T ss_pred HHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCEEEECCCCC
Confidence 4478887 55666765 343444432 224689999999986
No 176
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=24.93 E-value=4.8e+02 Score=23.94 Aligned_cols=106 Identities=11% Similarity=0.085 Sum_probs=61.1
Q ss_pred EEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecCchHHHHHHhc--CCCcCEEEeeCCHHHHHHHHHhc-----
Q psy18173 48 GLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVSTREEISDLLSM--EKHIDLIIPRGSSDLVRSIQQKS----- 119 (191)
Q Consensus 48 ~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~~~~~~~~l~~--~~~v~~v~ftGs~~~~~~v~~~~----- 119 (191)
.||+.|..-.-.....+.+.++..|+++|+. .++.. .......++... ....|.|+.-|+..+...+..--
T Consensus 115 lvIvNP~SGkg~a~k~~~~~v~~~L~~~gi~~~v~~T-~~~ghA~~la~~~~~~~~D~VV~vGGDGTlnEVvNGL~~~~~ 193 (481)
T PLN02958 115 LVFVNPFGGKKSASKIFFDVVKPLLEDADIQLTIQET-KYQLHAKEVVRTMDLSKYDGIVCVSGDGILVEVVNGLLERED 193 (481)
T ss_pred EEEEcCCCCCcchhHHHHHHHHHHHHHcCCeEEEEec-cCccHHHHHHHHhhhcCCCEEEEEcCCCHHHHHHHHHhhCcc
Confidence 4888887654443344445666778888876 32221 222112222211 35689999999998777654321
Q ss_pred ----CCCcE--EEecCccCeEEE-----cCCCCHHHHHHHHHHhhc
Q psy18173 120 ----QHIPV--LGHAEGICHVYV-----DKDADIRKAIKIARDSKC 154 (191)
Q Consensus 120 ----~~~~~--~~e~gG~n~~iV-----~~dadl~~aa~~iv~~~~ 154 (191)
...|+ +=-+.||+.+-= .-..|++.|+..|+.+..
T Consensus 194 ~~~~~~~pLGiIPaGTgNdfArsL~~~~gip~~~~~A~~~I~~g~~ 239 (481)
T PLN02958 194 WKTAIKLPIGMVPAGTGNGMAKSLLDSVGEPCSATNAVLAIIRGHK 239 (481)
T ss_pred ccccccCceEEecCcCcchhhhhhccccCCCcCHHHHHHHHHcCCc
Confidence 12343 334556665432 233589999999988764
No 177
>PRK05473 hypothetical protein; Provisional
Probab=24.86 E-value=1.6e+02 Score=20.72 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=28.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHHHHHHHHhcCC-C
Q psy18173 46 ANGLLLKGGKEAFHSNKALMDVVKEALASVGA-Q 78 (191)
Q Consensus 46 GN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGl-P 78 (191)
.+|+.|+....-......+.+.+.+||+|-|. |
T Consensus 5 ~~Tm~F~~~~~~~~~v~eiL~~Vy~AL~EKGYNP 38 (86)
T PRK05473 5 DKTMRFDFDDEKKKDVREILTTVYDALEEKGYNP 38 (86)
T ss_pred CCceeeeCCcccHHHHHHHHHHHHHHHHHcCCCh
Confidence 67999998888888788888888999999998 6
No 178
>cd06289 PBP1_MalI_like Ligand-binding domain of MalI, a transcription regulator of the maltose system of Escherichia coli and its close homologs from other bacteria. This group includes the ligand-binding domain of MalI, a transcription regulator of the maltose system of Escherichia coli and its close homologs from other bacteria. They are members of the LacI-GalR family of repressor proteins which are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=24.67 E-value=3.5e+02 Score=21.25 Aligned_cols=63 Identities=19% Similarity=0.245 Sum_probs=39.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEec-C--c----hHHHHHHhcCCCcCEEEeeCCH
Q psy18173 46 ANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVS-T--R----EEISDLLSMEKHIDLIIPRGSS 109 (191)
Q Consensus 46 GN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~-~--~----~~~~~~l~~~~~v~~v~ftGs~ 109 (191)
++..++-+++... ......+-|.+++++.|++ ....++. + . ....+++..+|++++|+.++..
T Consensus 118 ~~i~~l~~~~~~~-~~~~r~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~ 188 (268)
T cd06289 118 RRIAFIGGLEDSS-TRRERLAGYRAALAEAGLPFDSELVVEGPPSRQGGAEAVAQLLDLPPRPTAIVCFNDL 188 (268)
T ss_pred CCEEEecCCcccc-chHHHHHHHHHHHHHcCCCCCchhEEecCcchhhHHHHHHHHHcCCCCCCEEEEcCcH
Confidence 4667776655433 3344567778888888865 4333333 2 1 2356777778899998877654
No 179
>PRK13883 conjugal transfer protein TrbH; Provisional
Probab=22.96 E-value=1.1e+02 Score=23.73 Aligned_cols=27 Identities=19% Similarity=0.306 Sum_probs=24.1
Q ss_pred CceEEEecCcCCcchHHHHHHHHHhcCC
Q psy18173 163 METLLIHEDHFQGSFFTDVCKMFRDEGV 190 (191)
Q Consensus 163 ~~~v~V~~~i~~~~f~~~l~~~~~~~g~ 190 (191)
-.++.++++.-| .|-..|.+.|++.|+
T Consensus 52 ~Tt~~l~q~~~D-~Fg~aL~~aLR~~GY 78 (151)
T PRK13883 52 QTRFELQQPTPD-AFGQALVKALRDKGY 78 (151)
T ss_pred ceEEEEecCCCc-HHHHHHHHHHHHcCe
Confidence 378888999988 999999999999986
No 180
>cd05569 PTS_IIB_fructose PTS_IIB_fructose: subunit IIB of enzyme II (EII) of the fructose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII (also referred to as FruAB) is a fructose-specific permease made up of two proteins (FruA and FruB) each containing 3 domains. The FruA protein contains two tandem nonidentical IIB domains and a C-terminal IIC transmembrane domain. Both IIB domains of FruA are included in this alignment. The FruB protein (also referred to as diphosphoryl transfer protein) contains a IIA domain, a domain of unknown function, and an Hpr-like domain called FPr (fructose-inducible HPr). This familiy also includes the IIB domains of several fructose-like PTS permeases including the Frv permease encoded by the frvABXR operon, the Frw permease encoded by the frwACBD operon, the Frx permease encoded by the hrsA gene, and the Fry permease encoded by the fryABC (ypdDGH) operon. FruAB takes up exogenous fructose, releasing the 1-p
Probab=22.87 E-value=2.2e+02 Score=19.90 Aligned_cols=57 Identities=11% Similarity=0.088 Sum_probs=36.3
Q ss_pred eCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEec-Cc-hHHH-HHHhcCCCcCEEEeeCCHHH
Q psy18173 52 KGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVS-TR-EEIS-DLLSMEKHIDLIIPRGSSDL 111 (191)
Q Consensus 52 Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~-~~-~~~~-~~l~~~~~v~~v~ftGs~~~ 111 (191)
-.++....++.+.++.+++++++.|+. .+-+--. +. .... +- -...|.|+++|....
T Consensus 5 ~ac~~G~a~s~laa~~L~~aa~~~g~~~~ve~~~~~g~~~~l~~~~---i~~Ad~vi~~~~~~~ 65 (96)
T cd05569 5 TACPTGIAHTYMAAEALEKAAKKLGWEIKVETQGSLGIENELTAED---IAEADAVILAADVPV 65 (96)
T ss_pred EECCCchhHHHHHHHHHHHHHHHCCCeEEEEEecCcCccCcCCHHH---HhhCCEEEEecCCCC
Confidence 345566788888999999999999988 3221111 21 1111 21 246899999987653
No 181
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=22.84 E-value=84 Score=23.19 Aligned_cols=41 Identities=20% Similarity=0.353 Sum_probs=24.1
Q ss_pred HHhcCCC-CeEEEecC-chHHHHHHhc-CCCcCEEEeeCCHHHH
Q psy18173 72 LASVGAQ-DAISLVST-REEISDLLSM-EKHIDLIIPRGSSDLV 112 (191)
Q Consensus 72 l~~aGlP-g~v~~l~~-~~~~~~~l~~-~~~v~~v~ftGs~~~~ 112 (191)
+.+.|+. -...++.+ .+...+.+.. -.+.|.|+.||++..+
T Consensus 28 l~~~G~~v~~~~~v~Dd~~~i~~~i~~~~~~~DlvittGG~g~g 71 (133)
T cd00758 28 LEDLGCEVIYAGVVPDDADSIRAALIEASREADLVLTTGGTGVG 71 (133)
T ss_pred HHHCCCEEEEeeecCCCHHHHHHHHHHHHhcCCEEEECCCCCCC
Confidence 3467765 44555664 3444444332 1248999999998643
No 182
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=22.81 E-value=5.7e+02 Score=23.06 Aligned_cols=164 Identities=13% Similarity=0.131 Sum_probs=86.0
Q ss_pred cCCeeeEEEeecceeEEEEeCC--CC--chhHHHHHHHHHhCCE--EEEeCCcc--cHHHHHHHHHHHHHHHHhcCCCCe
Q psy18173 9 ADGLSLSQVTVPIGVLLVIFES--RP--DSLPQVAALALASANG--LLLKGGKE--AFHSNKALMDVVKEALASVGAQDA 80 (191)
Q Consensus 9 ~~g~~~~~~~~PlGvv~~I~p~--~P--~~~~~~~~~AL~aGN~--vi~Kps~~--~~~t~~~~~~~~~~~l~~aGlPg~ 80 (191)
.+|.....++.|+--|++..|- +| ....+.+++|-.+|.. ++.-|... ......+ + ++..+|.-.+
T Consensus 81 ~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL-~-----aa~~~Gv~ei 154 (390)
T cd06572 81 EPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAIL-A-----AAKLAGVDEI 154 (390)
T ss_pred CCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHH-H-----HHHHcCCcEE
Confidence 3577788899999999999995 45 4334668889999875 44455532 1111111 1 1224544332
Q ss_pred EEEecCchHHHH-HH--hcCCCcCEEEeeCCHHHHHHHHHhcCCCcE-EEecCccCeEEEcCCCCHHHHHHHHHHhhcCC
Q psy18173 81 ISLVSTREEISD-LL--SMEKHIDLIIPRGSSDLVRSIQQKSQHIPV-LGHAEGICHVYVDKDADIRKAIKIARDSKCDY 156 (191)
Q Consensus 81 v~~l~~~~~~~~-~l--~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~-~~e~gG~n~~iV~~dadl~~aa~~iv~~~~~~ 156 (191)
+.+ -|...+.. .+ .+-|++|.|+=-|..-+...=..-....-+ +..+..---+|-|++||.+..+.+++.=+=+.
T Consensus 155 y~v-GGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~ 233 (390)
T cd06572 155 YKV-GGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSGDVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHD 233 (390)
T ss_pred ecc-CCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcCCcCccCCCCCceEEEEeCCCCCHHHHHHHHHhhhccC
Confidence 222 13222222 22 246899999877755443321111111111 11222222356677799999998887643322
Q ss_pred CCccccCceEEEecCcCCcchHHHHHHHHH
Q psy18173 157 PAACNAMETLLIHEDHFQGSFFTDVCKMFR 186 (191)
Q Consensus 157 GQ~C~s~~~v~V~~~i~~~~f~~~l~~~~~ 186 (191)
.. ..-+++-.|- ++.++..++++
T Consensus 234 ~~----a~aiLvT~s~---~la~~V~~~v~ 256 (390)
T cd06572 234 PD----SQAILVTTSE---ELAEAVEEEVE 256 (390)
T ss_pred CC----CeEEEEECCH---HHHHHHHHHHH
Confidence 21 1234554442 45555555444
No 183
>COG1879 RbsB ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]
Probab=22.19 E-value=3.2e+02 Score=22.81 Aligned_cols=65 Identities=17% Similarity=0.260 Sum_probs=41.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC---ch----HHHHHHhcCCCcCEEEeeCCHHH
Q psy18173 46 ANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST---RE----EISDLLSMEKHIDLIIPRGSSDL 111 (191)
Q Consensus 46 GN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~---~~----~~~~~l~~~~~v~~v~ftGs~~~ 111 (191)
|+.+++..++..+..... .+-+++.+.+.+-+ .++....+ .+ ...++|..||++++|+-.|....
T Consensus 159 g~v~~~~g~~~~~~~~~R-~~G~~~~l~~~~~~~~v~~~~~~~~~~~~a~~~~~~~L~~~pdi~~i~~~~d~~a 231 (322)
T COG1879 159 GKVVVLVGSPGNSSAEER-VKGFRDALKEHPPDIEVVDVQTGDWDRDKALEVMEDLLAANPDIDGIYAANDGMA 231 (322)
T ss_pred CeEEEEecCCCCchHHHH-HhhHHHHHHhCCCcEEEeeccCCcccHHHHHHHHHHHHHhCCCceEEEECCchhH
Confidence 667888888877766555 34456666665432 22222222 11 35788999999999988876654
No 184
>cd06307 PBP1_uncharacterized_sugar_binding Periplasmic sugar-binding domain of uncharacterized transport systems. Periplasmic sugar-binding domain of uncharacterized transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. The members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes.
Probab=21.97 E-value=4.1e+02 Score=21.14 Aligned_cols=63 Identities=13% Similarity=0.063 Sum_probs=39.4
Q ss_pred CEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEecC---c----hHHHHHHhcCCCcCEEEeeCCHH
Q psy18173 47 NGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVST---R----EEISDLLSMEKHIDLIIPRGSSD 110 (191)
Q Consensus 47 N~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~~---~----~~~~~~l~~~~~v~~v~ftGs~~ 110 (191)
+..++-+.+..+.+ ..-.+-+.+++++.|.+ .......+ . ....+++..++++++|+.++...
T Consensus 127 ~i~~i~~~~~~~~~-~~R~~gf~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~ 197 (275)
T cd06307 127 KVAVLAGSHRFRGH-EEREMGFRSVLREEFPGLRVLETLEGLDDPARAYEATRKLLARHPDLVGIYNAGGGN 197 (275)
T ss_pred eEEEEecCCCCcch-HHHHHHHHHHHHhhCCCcEEEeeccCCCChHHHHHHHHHHHHhCCCceEEEECCCCh
Confidence 77777776544433 33445677888888776 54444432 1 23456776678899988887653
No 185
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=21.94 E-value=5e+02 Score=22.12 Aligned_cols=119 Identities=11% Similarity=0.054 Sum_probs=69.9
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCCCeEEEec-Cc---h-------HHH----HHHhcCCCcCEEEee
Q psy18173 42 ALASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQDAISLVS-TR---E-------EIS----DLLSMEKHIDLIIPR 106 (191)
Q Consensus 42 AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlPg~v~~l~-~~---~-------~~~----~~l~~~~~v~~v~ft 106 (191)
|.+.|=+|- -.|+.-...-..+.+++.+ ..+.|+|=+.-+.+ +. + .+. -....--+|=.+.+|
T Consensus 111 adAV~~~Vy-~Gse~e~~~i~~~~~v~~~-a~~~Gmp~v~~~YpRg~~~~~~~~~d~~~v~~aaRlaaelGADIiK~~yt 188 (265)
T COG1830 111 ADAVGATVY-VGSETEREMIENISQVVED-AHELGMPLVAWAYPRGPAIKDEYHRDADLVGYAARLAAELGADIIKTKYT 188 (265)
T ss_pred CcEEEEEEe-cCCcchHHHHHHHHHHHHH-HHHcCCceEEEEeccCCcccccccccHHHHHHHHHHHHHhcCCeEeecCC
Confidence 344444433 4777778877888887765 46789994433333 31 1 111 011223477788999
Q ss_pred CCHHHHHHHHHhcCCCcEEEecCccCeEEEcCCCCHHHHHHHHHHhhcCCCCccccCceEEEecC
Q psy18173 107 GSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARDSKCDYPAACNAMETLLIHED 171 (191)
Q Consensus 107 Gs~~~~~~v~~~~~~~~~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~~~GQ~C~s~~~v~V~~~ 171 (191)
|+++..+.+-+.+. .|++..+|.|.. -+.-+...++...++|-+=.+.-|=+-+.+
T Consensus 189 g~~e~F~~vv~~~~-vpVviaGG~k~~--------~~~~~l~~~~~ai~aGa~G~~~GRNifQ~~ 244 (265)
T COG1830 189 GDPESFRRVVAACG-VPVVIAGGPKTE--------TEREFLEMVTAAIEAGAMGVAVGRNIFQHE 244 (265)
T ss_pred CChHHHHHHHHhCC-CCEEEeCCCCCC--------ChHHHHHHHHHHHHccCcchhhhhhhhccC
Confidence 99999999988886 999998887741 122233344444444554444444333443
No 186
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=21.54 E-value=1e+02 Score=22.58 Aligned_cols=42 Identities=24% Similarity=0.383 Sum_probs=24.5
Q ss_pred HHhcCCC-CeEEEecC-chHHHHHHhc-CCCcCEEEeeCCHHHHH
Q psy18173 72 LASVGAQ-DAISLVST-REEISDLLSM-EKHIDLIIPRGSSDLVR 113 (191)
Q Consensus 72 l~~aGlP-g~v~~l~~-~~~~~~~l~~-~~~v~~v~ftGs~~~~~ 113 (191)
|.+.|.- -...++.+ .+...+.+.. ..+.|.|+.||++..++
T Consensus 27 l~~~G~~~~~~~~v~Dd~~~I~~~l~~~~~~~dliittGG~g~g~ 71 (135)
T smart00852 27 LTELGIEVTRYVIVPDDKEAIKEALREALERADLVITTGGTGPGP 71 (135)
T ss_pred HHHCCCeEEEEEEeCCCHHHHHHHHHHHHhCCCEEEEcCCCCCCC
Confidence 4467774 44555564 3434333321 13589999999986443
No 187
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=21.44 E-value=89 Score=25.28 Aligned_cols=20 Identities=35% Similarity=0.602 Sum_probs=12.9
Q ss_pred chHHHHHHhcCCCcCEEEeeCCH
Q psy18173 87 REEISDLLSMEKHIDLIIPRGSS 109 (191)
Q Consensus 87 ~~~~~~~l~~~~~v~~v~ftGs~ 109 (191)
.+...+++. .+|+++|||+.
T Consensus 49 ~~~~~~~l~---~idGlll~GG~ 68 (217)
T PF07722_consen 49 DEELDELLD---RIDGLLLPGGG 68 (217)
T ss_dssp HHHHHHHHH---CSSEEEE---S
T ss_pred HHHHHHHHh---hcCEEEEcCCc
Confidence 355667765 69999999999
No 188
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=21.43 E-value=1e+02 Score=21.31 Aligned_cols=36 Identities=22% Similarity=0.378 Sum_probs=21.5
Q ss_pred hcCCC--CeEEEecCc--hH----HHHHHhcCCCcCEEEeeCCHH
Q psy18173 74 SVGAQ--DAISLVSTR--EE----ISDLLSMEKHIDLIIPRGSSD 110 (191)
Q Consensus 74 ~aGlP--g~v~~l~~~--~~----~~~~l~~~~~v~~v~ftGs~~ 110 (191)
++|+| .+++.+..+ .. ..+++. +.+||+|++|=++.
T Consensus 28 ~~Gi~~~~v~~~~~~~~~~~g~~~i~~~i~-~~~IdlVIn~~~~~ 71 (95)
T PF02142_consen 28 EHGIEVTEVVNKIGEGESPDGRVQIMDLIK-NGKIDLVINTPYPF 71 (95)
T ss_dssp HTT--EEECCEEHSTG-GGTHCHHHHHHHH-TTSEEEEEEE--TH
T ss_pred HcCCCceeeeeecccCccCCchhHHHHHHH-cCCeEEEEEeCCCC
Confidence 68988 445555532 23 567777 57999999987664
No 189
>PRK00941 acetyl-CoA decarbonylase/synthase complex subunit alpha; Validated
Probab=21.36 E-value=4.5e+02 Score=26.04 Aligned_cols=129 Identities=13% Similarity=0.081 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHH------------HhcCC---C-CeEEEec-Cch-----HHHHHHhcCCCcCEEEeeCCHHHHHHHH
Q psy18173 59 HSNKALMDVVKEAL------------ASVGA---Q-DAISLVS-TRE-----EISDLLSMEKHIDLIIPRGSSDLVRSIQ 116 (191)
Q Consensus 59 ~t~~~~~~~~~~~l------------~~aGl---P-g~v~~l~-~~~-----~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 116 (191)
+.+..++++++..| .++|+ . +-++++. |+. .+-+.+..+.-.++|.+.|.--+|..+.
T Consensus 200 ~~g~~ia~~~qdilfG~P~~~~~~~~~e~nlGvld~~~vnI~vhGHnp~l~~~iv~~~~~~el~~gI~~~GiCCTg~e~~ 279 (781)
T PRK00941 200 HVGMEIADIAQIVAYDMPKGDPDAPLVELGMGTIDKSKPVILVIGHNVAPGTYIIDYLEENGLTDKVEVCGICCTAIDIT 279 (781)
T ss_pred hhHHHHHHHHHHHHcCCCCCCCCCceeeccCcccCCCCcEEEEECCCchHHHHHHHHHhCcchhhCceEEEEecccchHh
Confidence 66677777777766 12333 2 5677765 642 1222222222233443334333334443
Q ss_pred HhcCCCc---------EEEecCccCeEEEcCCCCHHHHHHHHHHhhcCCCCccccCceEEEecCcCCcchHHHHHHHHHh
Q psy18173 117 QKSQHIP---------VLGHAEGICHVYVDKDADIRKAIKIARDSKCDYPAACNAMETLLIHEDHFQGSFFTDVCKMFRD 187 (191)
Q Consensus 117 ~~~~~~~---------~~~e~gG~n~~iV~~dadl~~aa~~iv~~~~~~GQ~C~s~~~v~V~~~i~~~~f~~~l~~~~~~ 187 (191)
++....| .+.-.|--+.++||..+=....++.. .+|..+..+++.+.-+=-.++.+ +=.+.++++|.+
T Consensus 280 R~~~g~~~~Gn~~~qe~~i~TGavD~~VvD~QCi~p~L~eiA--~~ygt~lItTs~k~~~eLPdit~-~die~Ii~~L~~ 356 (781)
T PRK00941 280 RYSEKAKVVGPLSKQLKFIRSGIPDVIVVDEQCVRTDILEEA--KKLGIPVIATNDKICLGLPDRTD-EDVDEIIEDLVS 356 (781)
T ss_pred hhccCCcccCcHHHHHHHHHcCCCcEEEEecccCcccHHHHH--HHhCCCEEEecccccccCCCCCc-cCHHHHHHHHHh
Confidence 3311111 22346788999999987555444433 67889999999988887788877 668888888887
Q ss_pred cCC
Q psy18173 188 EGV 190 (191)
Q Consensus 188 ~g~ 190 (191)
.|+
T Consensus 357 ~~~ 359 (781)
T PRK00941 357 GKI 359 (781)
T ss_pred CCC
Confidence 764
No 190
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=21.11 E-value=4.3e+02 Score=21.52 Aligned_cols=127 Identities=15% Similarity=0.094 Sum_probs=62.7
Q ss_pred EEEEeCCcccHHHHHHHHHHHHHHHHhcCC-C---CeEEEecC--chHHHHHHhcCCCcCEEEeeCCHHHHHHHHHhc--
Q psy18173 48 GLLLKGGKEAFHSNKALMDVVKEALASVGA-Q---DAISLVST--REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS-- 119 (191)
Q Consensus 48 ~vi~Kps~~~~~t~~~~~~~~~~~l~~aGl-P---g~v~~l~~--~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~-- 119 (191)
.+|.+|.+++... ++. |++.|. | .++.+.+. .......+..-.+.|.|+||= ....+...++.
T Consensus 6 vlvTRp~~~~~~l----~~~----l~~~G~~~~~~P~i~i~p~~~~~~~~~~l~~l~~~d~iifTS-~naV~~~~~~l~~ 76 (255)
T PRK05752 6 LLLTRPAEECAAL----AAS----LAEAGIFSSSLPLLAIEPLPETPEQRALLLELDRYCAVIVVS-KPAARLGLELLDR 76 (255)
T ss_pred EEECCcHHHHHHH----HHH----HHHcCCCEEEcCcEEEeeCCCCHHHHHHHhcCCCCCEEEEEC-HHHHHHHHHHHHh
Confidence 3455677765443 333 335777 3 34555542 223444555446899999994 44444433221
Q ss_pred -C----CCcEEE---------ecCccCeEEEcCCCCHHHHHHHHHHhhcCCCCccccCceEEEecCcCCcchHHHHHHHH
Q psy18173 120 -Q----HIPVLG---------HAEGICHVYVDKDADIRKAIKIARDSKCDYPAACNAMETLLIHEDHFQGSFFTDVCKMF 185 (191)
Q Consensus 120 -~----~~~~~~---------e~gG~n~~iV~~dadl~~aa~~iv~~~~~~GQ~C~s~~~v~V~~~i~~~~f~~~l~~~~ 185 (191)
. ..++.. +--|..+.++.+..|-+.-++....... .....+++++.++.. --+.|.+.|
T Consensus 77 ~~~~~~~~~~~aVG~~Ta~al~~~G~~~~~~p~~~~se~Ll~~~~l~~~----~~~~~~~vLi~rg~~---~r~~L~~~L 149 (255)
T PRK05752 77 YWPQPPQQPWFSVGAATAAILQDYGLDVSYPEQGDDSEALLALPALRQA----LAVPDPRVLIMRGEG---GRELLAERL 149 (255)
T ss_pred hCCCCcCCEEEEECHHHHHHHHHcCCCcccCCCCCCcHHHHhChhhhcc----ccCCCCEEEEEccCc---cHHHHHHHH
Confidence 1 133321 2235555555454554433322211111 011235677777653 345577788
Q ss_pred HhcCC
Q psy18173 186 RDEGV 190 (191)
Q Consensus 186 ~~~g~ 190 (191)
++.|+
T Consensus 150 ~~~G~ 154 (255)
T PRK05752 150 REQGA 154 (255)
T ss_pred HHCCC
Confidence 88775
No 191
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=20.80 E-value=4.8e+02 Score=22.26 Aligned_cols=44 Identities=16% Similarity=0.286 Sum_probs=26.8
Q ss_pred HHHHHhcCCCcCEEEeeCC---HH--HHHHHHHhcCCCcEEEecCccCe
Q psy18173 90 ISDLLSMEKHIDLIIPRGS---SD--LVRSIQQKSQHIPVLGHAEGICH 133 (191)
Q Consensus 90 ~~~~l~~~~~v~~v~ftGs---~~--~~~~v~~~~~~~~~~~e~gG~n~ 133 (191)
.-+++..||+++.|.+..= .. .++..++.+..||++.--+|...
T Consensus 189 ~l~~l~~Dp~T~~I~lylE~~~~~~~~~~~~~~~~~~KPVV~lk~Grs~ 237 (286)
T TIGR01019 189 VLEAFEKDPETEAIVMIGEIGGSAEEEAADFIKQNMSKPVVGFIAGATA 237 (286)
T ss_pred HHHHHhhCCCCcEEEEEEecCCchHHHHHHHHHhcCCCCEEEEEecCCC
Confidence 4456677999999998632 11 22333333346998876666653
No 192
>TIGR03628 arch_S11P archaeal ribosomal protein S11P. This model describes exclusively the archaeal ribosomal protein S11P. It excludes homologous ribosomal proteins S14 from eukaryotes and S11 from bacteria.
Probab=20.76 E-value=2e+02 Score=21.29 Aligned_cols=60 Identities=8% Similarity=-0.010 Sum_probs=37.2
Q ss_pred ceeEEEEeCC-CCchhH-HH-H--HHHHHhCCEEEEeCC-cccHHHHHHHHHHHHHHHHhcCCCCe
Q psy18173 21 IGVLLVIFES-RPDSLP-QV-A--ALALASANGLLLKGG-KEAFHSNKALMDVVKEALASVGAQDA 80 (191)
Q Consensus 21 lGvv~~I~p~-~P~~~~-~~-~--~~AL~aGN~vi~Kps-~~~~~t~~~~~~~~~~~l~~aGlPg~ 80 (191)
.|++-+.+.| +...++ .. . ..+-.+|-.+.+|.+ ..+|+.++..++-+.+-+.+.|+..+
T Consensus 2 ~gi~hI~as~NNTiitvTD~~G~~~~~~~S~G~~g~kg~kk~TpyAAq~aa~~~~~~~~~~Gi~~v 67 (114)
T TIGR03628 2 WGIAHIYSSFNNTIITITDITGAETIARSSGGMVVKADRDESSPYAAMQAAGRAAEKAKERGITGL 67 (114)
T ss_pred cEEEEEEccCCCeEEEEEcCCCCEEEEEecCcceEeCCCccCCHHHHHHHHHHHHHHHHHcCCcEE
Confidence 5777777777 665454 21 0 112233444455555 56899999988877777777787743
No 193
>PRK03604 moaC bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA; Provisional
Probab=20.64 E-value=1.1e+02 Score=26.54 Aligned_cols=42 Identities=21% Similarity=0.356 Sum_probs=27.0
Q ss_pred HHhcCCC-CeEEEecC-chHHHHHHhc--CCCcCEEEeeCCHHHHH
Q psy18173 72 LASVGAQ-DAISLVST-REEISDLLSM--EKHIDLIIPRGSSDLVR 113 (191)
Q Consensus 72 l~~aGlP-g~v~~l~~-~~~~~~~l~~--~~~v~~v~ftGs~~~~~ 113 (191)
|.+.|.- --..++++ .+...+.+.. ..+.|.|+.||++..+.
T Consensus 184 L~~~G~~v~~~~iVpDD~~~I~~al~~a~~~~~DlIITTGGtg~g~ 229 (312)
T PRK03604 184 LEEAGFEVSHYTIIPDEPAEIAAAVAAWIAEGYALIITTGGTGLGP 229 (312)
T ss_pred HHHCCCEEEEEEEcCCCHHHHHHHHHHhhhCCCCEEEECCCCCCCC
Confidence 4467775 55667775 4445555543 24689999999986433
No 194
>cd06273 PBP1_GntR_like_1 This group includes the ligand-binding domain of putative DNA transcription repressors which are highly similar to that of the repressor specific for gluconate (GntR), a member of the LacI-GalR family of bacterial transcription regulators. This group includes the ligand-binding domain of putative DNA transcription repressors which are highly similar to that of the repressor specific for gluconate (GntR), a member of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational
Probab=20.32 E-value=4.3e+02 Score=20.76 Aligned_cols=66 Identities=17% Similarity=0.145 Sum_probs=38.5
Q ss_pred HhCCEEEEeCCcccHHHHHHHHHHHHHHHHhcCCC-CeEEEec-C--c----hHHHHHHhcCCCcCEEEeeCCH
Q psy18173 44 ASANGLLLKGGKEAFHSNKALMDVVKEALASVGAQ-DAISLVS-T--R----EEISDLLSMEKHIDLIIPRGSS 109 (191)
Q Consensus 44 ~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~aGlP-g~v~~l~-~--~----~~~~~~l~~~~~v~~v~ftGs~ 109 (191)
..++..++-.+...-.....-.+-|.+++++.|++ ....++. + . ....+++..+++.++|+.+++.
T Consensus 115 g~~~i~~i~~~~~~~~~~~~r~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~~~ 188 (268)
T cd06273 115 GHRRIAMIFGPTQGNDRARARRAGVRAALAEAGLELPELWQVEAPYSIADGRAALRQLLEQPPRPTAVICGNDV 188 (268)
T ss_pred CCCeEEEEeccccCCccHHHHHHHHHHHHHHcCCCCCHHHeeeCCCcHHHHHHHHHHHHcCCCCCCEEEEcChH
Confidence 34577777644322112334556678888899876 4333333 1 1 2345667667888988876544
No 195
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=20.18 E-value=1.7e+02 Score=20.60 Aligned_cols=52 Identities=27% Similarity=0.387 Sum_probs=31.3
Q ss_pred hcCCC-CeEEEec-CchHHHHHHhcCCCcCEEEeeCCHH----HHHHHHHhc--CCCcEEE
Q psy18173 74 SVGAQ-DAISLVS-TREEISDLLSMEKHIDLIIPRGSSD----LVRSIQQKS--QHIPVLG 126 (191)
Q Consensus 74 ~aGlP-g~v~~l~-~~~~~~~~l~~~~~v~~v~ftGs~~----~~~~v~~~~--~~~~~~~ 126 (191)
+.|++ ..++.++ +.....+++. +.++++|+.+=+.. .+..+-+.+ ...|++.
T Consensus 41 ~~gi~~~~v~~~~~~~~~i~~~i~-~~~id~vIn~~~~~~~~~~~~~iRR~Av~~~ipl~T 100 (110)
T cd01424 41 EAGIPVEVVNKVSEGRPNIVDLIK-NGEIQLVINTPSGKRAIRDGFSIRRAALEYKVPYFT 100 (110)
T ss_pred HcCCeEEEEeecCCCchhHHHHHH-cCCeEEEEECCCCCccCccHHHHHHHHHHhCCCEEe
Confidence 57888 7777765 3455677776 57899998852221 233343333 1577764
No 196
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=20.14 E-value=2.4e+02 Score=20.35 Aligned_cols=72 Identities=18% Similarity=0.222 Sum_probs=40.9
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHHHHHh-cCCC-CeEEEe-c-CchHHHHHHhcCCCcCEEEeeCCH-------H
Q psy18173 42 ALASANGLLLKGGKEAFHSNKALMDVVKEALAS-VGAQ-DAISLV-S-TREEISDLLSMEKHIDLIIPRGSS-------D 110 (191)
Q Consensus 42 AL~aGN~vi~Kps~~~~~t~~~~~~~~~~~l~~-aGlP-g~v~~l-~-~~~~~~~~l~~~~~v~~v~ftGs~-------~ 110 (191)
.+.+|-.+. .|..|+.++. + .|++ ..+.+- . |.....+++. +.++++|++|-++ .
T Consensus 23 ~ll~Gf~i~-----AT~gTa~~L~--------~~~Gi~v~~vk~~~~~g~~~i~~~i~-~g~i~~VInt~~~~~~~~~~~ 88 (115)
T cd01422 23 ELLSRHRLV-----ATGTTGLLIQ--------EATGLTVNRMKSGPLGGDQQIGALIA-EGEIDAVIFFRDPLTAQPHEP 88 (115)
T ss_pred HHhcCCEEE-----EechHHHHHH--------HhhCCcEEEEecCCCCchhHHHHHHH-cCceeEEEEcCCCCCCCcccc
Confidence 444466665 2455544433 4 6888 555221 2 3455667776 6899999999542 2
Q ss_pred HHHHHHHhc--CCCcEEEe
Q psy18173 111 LVRSIQQKS--QHIPVLGH 127 (191)
Q Consensus 111 ~~~~v~~~~--~~~~~~~e 127 (191)
-+..+-+.+ ...|++..
T Consensus 89 dg~~iRr~a~~~~Ip~~Tt 107 (115)
T cd01422 89 DVKALLRLCDVYNIPLATN 107 (115)
T ss_pred cHHHHHHHHHHcCCCEEEc
Confidence 345554433 25776643
Done!