Query psy18174
Match_columns 144
No_of_seqs 136 out of 1259
Neff 7.5
Searched_HMMs 46136
Date Sat Aug 17 00:35:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18174.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18174hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01446 DSP_MapKP N-terminal r 99.8 3.2E-19 7E-24 126.7 10.5 117 16-141 1-120 (132)
2 COG2897 SseA Rhodanese-related 99.7 4.8E-16 1.1E-20 123.8 10.4 107 13-142 9-126 (285)
3 PLN02723 3-mercaptopyruvate su 99.7 7.3E-16 1.6E-20 124.7 10.8 106 13-141 20-138 (320)
4 PRK09629 bifunctional thiosulf 99.6 9.7E-16 2.1E-20 133.1 11.3 106 13-141 7-116 (610)
5 cd01525 RHOD_Kc Member of the 99.6 1.7E-15 3.7E-20 102.9 9.6 98 17-141 1-99 (105)
6 cd01445 TST_Repeats Thiosulfat 99.6 3E-15 6.5E-20 107.7 11.2 107 17-142 1-133 (138)
7 PRK11493 sseA 3-mercaptopyruva 99.6 3.7E-15 8E-20 118.4 10.6 106 13-141 3-122 (281)
8 cd01518 RHOD_YceA Member of th 99.6 5.6E-15 1.2E-19 100.1 8.9 93 15-141 2-95 (101)
9 cd01534 4RHOD_Repeat_3 Member 99.6 2E-14 4.4E-19 96.4 9.5 90 17-142 1-90 (95)
10 cd01448 TST_Repeat_1 Thiosulfa 99.6 3.5E-14 7.5E-19 99.1 10.9 103 16-141 1-114 (122)
11 cd01520 RHOD_YbbB Member of th 99.6 8.2E-15 1.8E-19 103.8 7.5 106 17-141 1-120 (128)
12 PF00581 Rhodanese: Rhodanese- 99.6 1.2E-14 2.5E-19 98.9 7.4 99 18-141 1-106 (113)
13 cd01449 TST_Repeat_2 Thiosulfa 99.6 2.9E-14 6.4E-19 98.7 9.0 97 17-141 1-112 (118)
14 KOG1717|consensus 99.6 3.1E-15 6.7E-20 117.1 4.4 114 15-141 4-117 (343)
15 cd01523 RHOD_Lact_B Member of 99.5 2.1E-14 4.6E-19 97.0 7.6 94 17-141 1-94 (100)
16 cd01533 4RHOD_Repeat_2 Member 99.5 7.1E-14 1.5E-18 96.0 9.3 92 13-141 8-101 (109)
17 cd01521 RHOD_PspE2 Member of t 99.5 1.2E-13 2.6E-18 95.2 9.4 94 13-141 6-99 (110)
18 cd01530 Cdc25 Cdc25 phosphatas 99.5 1.7E-13 3.7E-18 96.4 9.2 44 16-59 3-50 (121)
19 cd01519 RHOD_HSP67B2 Member of 99.5 2.1E-13 4.6E-18 92.6 9.2 95 18-141 2-100 (106)
20 cd01524 RHOD_Pyr_redox Member 99.5 1.8E-13 3.8E-18 91.0 8.4 85 17-142 1-85 (90)
21 cd01528 RHOD_2 Member of the R 99.5 3.2E-13 6.8E-18 91.5 8.8 91 17-142 2-93 (101)
22 cd01447 Polysulfide_ST Polysul 99.5 4.1E-13 8.9E-18 90.5 8.8 94 17-142 1-96 (103)
23 cd01522 RHOD_1 Member of the R 99.5 6.7E-13 1.5E-17 92.6 9.6 95 17-141 1-98 (117)
24 cd01529 4RHOD_Repeats Member o 99.5 4.8E-13 1E-17 89.8 8.4 88 19-142 3-91 (96)
25 cd01444 GlpE_ST GlpE sulfurtra 99.4 7.2E-13 1.6E-17 88.3 8.4 85 17-141 2-90 (96)
26 cd01527 RHOD_YgaP Member of th 99.4 7.8E-13 1.7E-17 89.0 8.5 86 15-141 2-88 (99)
27 PRK00162 glpE thiosulfate sulf 99.4 9.5E-13 2.1E-17 90.2 8.5 87 14-141 4-92 (108)
28 smart00450 RHOD Rhodanese Homo 99.4 5.2E-13 1.1E-17 88.1 6.9 86 30-141 2-90 (100)
29 cd01526 RHOD_ThiF Member of th 99.4 9.4E-13 2E-17 92.3 8.6 97 14-141 7-107 (122)
30 TIGR03865 PQQ_CXXCW PQQ-depend 99.4 1.7E-12 3.7E-17 95.8 10.0 99 14-141 35-151 (162)
31 cd01443 Cdc25_Acr2p Cdc25 enzy 99.4 3.2E-12 6.9E-17 88.4 9.9 98 15-141 2-107 (113)
32 cd00158 RHOD Rhodanese Homolog 99.4 2.1E-12 4.5E-17 84.1 7.9 83 22-142 2-85 (89)
33 cd01531 Acr2p Eukaryotic arsen 99.4 6.5E-12 1.4E-16 86.8 10.2 45 15-60 2-46 (113)
34 KOG1529|consensus 99.3 8.1E-12 1.8E-16 98.7 10.0 108 13-141 3-123 (286)
35 PLN02723 3-mercaptopyruvate su 99.3 1.8E-11 3.9E-16 99.1 9.7 99 15-141 190-303 (320)
36 cd01532 4RHOD_Repeat_1 Member 99.3 1.5E-11 3.3E-16 82.1 7.7 78 30-141 8-86 (92)
37 PLN02160 thiosulfate sulfurtra 99.2 6.3E-11 1.4E-15 85.0 9.3 98 14-141 14-115 (136)
38 PRK00142 putative rhodanese-re 99.2 8.7E-11 1.9E-15 95.0 10.5 95 13-141 110-205 (314)
39 PRK01415 hypothetical protein; 99.2 5.8E-11 1.2E-15 93.1 8.3 93 15-141 112-205 (247)
40 PRK09629 bifunctional thiosulf 99.2 1E-10 2.3E-15 101.9 10.4 100 14-141 146-257 (610)
41 cd01535 4RHOD_Repeat_4 Member 99.2 8.8E-11 1.9E-15 85.2 8.2 81 22-141 2-83 (145)
42 PRK07411 hypothetical protein; 99.2 1.2E-10 2.6E-15 96.7 8.9 95 14-141 281-375 (390)
43 PRK11784 tRNA 2-selenouridine 99.2 1.8E-10 3.8E-15 94.4 9.0 105 18-141 4-122 (345)
44 PRK07878 molybdopterin biosynt 99.1 1.8E-10 3.9E-15 95.6 9.0 91 14-141 286-377 (392)
45 PRK05320 rhodanese superfamily 99.1 2.7E-10 5.9E-15 89.8 9.4 96 14-141 109-209 (257)
46 PRK08762 molybdopterin biosynt 99.1 2.9E-10 6.3E-15 93.9 8.9 90 14-142 2-92 (376)
47 PRK10287 thiosulfate:cyanide s 99.1 5.6E-10 1.2E-14 76.8 7.1 74 32-141 20-93 (104)
48 KOG1530|consensus 99.1 8.4E-10 1.8E-14 78.3 7.9 93 13-134 21-115 (136)
49 TIGR02981 phageshock_pspE phag 99.1 7.3E-10 1.6E-14 75.8 7.3 75 31-141 17-91 (101)
50 PRK11493 sseA 3-mercaptopyruva 99.0 2.5E-09 5.3E-14 85.0 9.0 97 16-141 154-265 (281)
51 PRK05600 thiamine biosynthesis 99.0 2.5E-09 5.3E-14 88.4 8.1 93 14-141 270-367 (370)
52 TIGR03167 tRNA_sel_U_synt tRNA 99.0 1.5E-09 3.3E-14 87.8 6.6 93 32-141 2-108 (311)
53 PRK05597 molybdopterin biosynt 98.9 3.2E-09 6.9E-14 87.2 7.8 87 15-141 261-348 (355)
54 COG2897 SseA Rhodanese-related 98.9 9.1E-09 2E-13 82.2 8.6 76 14-100 155-243 (285)
55 COG0607 PspE Rhodanese-related 98.8 1.2E-08 2.7E-13 69.0 7.1 76 30-141 18-95 (110)
56 KOG3772|consensus 98.5 2.4E-07 5.2E-12 74.8 5.1 48 13-60 154-205 (325)
57 COG1054 Predicted sulfurtransf 98.2 3.6E-06 7.9E-11 67.4 6.1 93 15-141 113-206 (308)
58 PRK01269 tRNA s(4)U8 sulfurtra 98.2 5.8E-06 1.3E-10 70.5 7.5 66 31-134 406-475 (482)
59 KOG2017|consensus 97.3 0.00064 1.4E-08 55.9 6.3 44 16-60 318-361 (427)
60 COG5105 MIH1 Mitotic inducer, 97.1 0.00046 1E-08 56.1 3.2 47 12-58 239-289 (427)
61 KOG3636|consensus 96.4 0.0031 6.7E-08 53.5 3.3 110 16-141 308-422 (669)
62 KOG1529|consensus 94.9 0.12 2.6E-06 41.4 6.8 62 30-100 170-245 (286)
63 PRK00142 putative rhodanese-re 89.6 0.069 1.5E-06 43.4 -1.0 42 14-58 13-54 (314)
64 COG2603 Predicted ATPase [Gene 80.3 1.1 2.4E-05 36.4 1.8 28 32-59 15-42 (334)
65 TIGR03167 tRNA_sel_U_synt tRNA 75.7 3.1 6.6E-05 33.9 3.1 35 14-50 135-172 (311)
66 KOG0333|consensus 60.3 22 0.00047 31.5 5.3 52 74-142 497-551 (673)
67 PRK07688 thiamine/molybdopteri 52.9 11 0.00024 30.9 2.3 36 15-51 277-316 (339)
68 KOG1093|consensus 52.6 2.2 4.8E-05 37.7 -1.9 40 14-58 621-660 (725)
69 TIGR01244 conserved hypothetic 50.0 86 0.0019 21.9 7.4 28 14-43 12-39 (135)
70 PF14606 Lipase_GDSL_3: GDSL-l 38.9 1.7E+02 0.0036 22.0 7.1 22 120-141 123-145 (178)
71 COG0529 CysC Adenylylsulfate k 37.8 39 0.00084 25.8 2.9 22 120-141 39-60 (197)
72 cd01786 STE50_RA Ubiquitin-lik 34.6 79 0.0017 21.3 3.7 38 90-138 57-94 (98)
73 COG1576 Uncharacterized conser 31.6 2.1E+02 0.0046 21.0 6.2 42 90-143 66-107 (155)
74 PF00156 Pribosyltran: Phospho 28.1 94 0.002 20.6 3.5 33 90-136 87-119 (125)
75 COG1236 YSH1 Predicted exonucl 28.0 22 0.00048 30.1 0.3 18 41-58 135-152 (427)
76 cd03364 TOPRIM_DnaG_primases T 26.6 94 0.002 19.3 3.0 19 120-138 59-77 (79)
77 TIGR01090 apt adenine phosphor 25.7 1.6E+02 0.0035 21.2 4.5 31 90-134 108-138 (169)
78 PF04273 DUF442: Putative phos 25.7 97 0.0021 21.1 3.1 28 14-43 12-39 (110)
79 TIGR00246 tRNA_RlmH_YbeA rRNA 25.2 2.7E+02 0.0059 20.2 5.6 46 86-143 60-105 (153)
80 KOG2935|consensus 23.4 90 0.002 25.0 2.9 23 119-141 140-162 (315)
81 COG3682 Predicted transcriptio 22.9 47 0.001 23.5 1.1 29 116-144 36-64 (123)
82 TIGR00201 comF comF family pro 22.4 1.6E+02 0.0036 21.6 4.1 31 90-134 151-181 (190)
83 PF07879 PHB_acc_N: PHB/PHA ac 21.9 1.4E+02 0.0031 18.6 3.0 32 10-42 12-44 (64)
84 PRK02304 adenine phosphoribosy 21.9 2.3E+02 0.005 20.5 4.8 31 90-134 113-143 (175)
85 PRK04923 ribose-phosphate pyro 20.6 2E+02 0.0044 23.4 4.6 25 16-40 110-135 (319)
86 PRK06031 phosphoribosyltransfe 20.2 1.9E+02 0.004 22.5 4.1 39 90-142 153-196 (233)
87 PRK11633 cell division protein 20.1 88 0.0019 24.4 2.2 21 118-138 160-180 (226)
No 1
>cd01446 DSP_MapKP N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase. This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by inducing a conformational change. This domain has homology to the Rhodanese Homology Domain.
Probab=99.81 E-value=3.2e-19 Score=126.69 Aligned_cols=117 Identities=38% Similarity=0.602 Sum_probs=89.6
Q ss_pred ccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEE
Q psy18174 16 CVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFV 95 (144)
Q Consensus 16 ~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VV 95 (144)
+|+++||.++++...++++|||+|+..+|..+|||||+|++++.+..++...+......++++++.++.+... ++.+||
T Consensus 1 ~is~~~l~~~l~~~~~~~~iiDvR~~~~~~~~hI~~ai~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~VV 79 (132)
T cd01446 1 TIDCAWLAALLREGGERLLLLDCRPFLEYSSSHIRGAVNVCCPTILRRRLQGGKILLQQLLSCPEDRDRLRRG-ESLAVV 79 (132)
T ss_pred CcCHHHHHHHHhcCCCCEEEEECCCHHHHhhCcccCcEecChHHHHHHhhcccchhhhhhcCCHHHHHHHhcC-CCCeEE
Confidence 5899999999985225799999999999999999999999999876666554444444578888877777665 688999
Q ss_pred EEcCCCCccccccccccccCCCccHHHHHHHHHHh---cCceeEEeecc
Q psy18174 96 VYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQ---DGCQVVCLLVL 141 (144)
Q Consensus 96 vYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~---~g~~~~~l~G~ 141 (144)
|||+. +. .+. .......+..++++|.. .+.++++|+||
T Consensus 80 vYd~~-~~-----~~~--~~~~~~~~~~~~~~l~~~~~~~~~v~~L~GG 120 (132)
T cd01446 80 VYDES-SS-----DRE--RLREDSTAESVLGKLLRKLQEGCSVYLLKGG 120 (132)
T ss_pred EEeCC-Cc-----chh--hccccchHHHHHHHHHHhcCCCceEEEEcch
Confidence 99988 21 110 11234467788889987 55669999998
No 2
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=99.67 E-value=4.8e-16 Score=123.76 Aligned_cols=107 Identities=27% Similarity=0.285 Sum_probs=85.2
Q ss_pred CCCccCHHHHHHHhccCCCCeEEEeec-----Cc--chhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHH
Q psy18174 13 LELCVSKSWLLQELRSDPSRLIILDCR-----SS--NEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKI 85 (144)
Q Consensus 13 ~~~~Is~~~L~~~l~~~~~~~~IlD~R-----~~--~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l 85 (144)
...+|+++||.++|. ++++.++||| .. ..|..+|||||++|++..++. ...+++|++|+++.++.+
T Consensus 9 ~~~lVs~~wl~~~l~--~~~~~~~d~~~~~~~~~~~~~Y~~~HIPGAv~~d~~~~~~-----~~~~~~~~lp~~e~fa~~ 81 (285)
T COG2897 9 SEFLVSPDWLAENLD--DPAVVIVDARIILPDPDDAEEYLEGHIPGAVFFDWEADLS-----DPVPLPHMLPSPEQFAKL 81 (285)
T ss_pred cceEEcHHHHHhhcc--ccccccCceEEEeCCcchHHHHHhccCCCCEecCHHHhhc-----CCCCCCCCCCCHHHHHHH
Confidence 367999999999998 4444455554 44 899999999999999988743 234489999999999887
Q ss_pred Hh--hC-CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeeccc
Q psy18174 86 MN--AY-KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVLK 142 (144)
Q Consensus 86 ~~--~~-~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~~ 142 (144)
.+ ++ ++++||+||+. |+ + .+..+...|+--|.+ |++|.||+
T Consensus 82 ~~~~GI~~d~tVVvYdd~------~~-~---------~A~ra~W~l~~~Gh~~V~iLdGG~ 126 (285)
T COG2897 82 LGELGIRNDDTVVVYDDG------GG-F---------FAARAWWLLRYLGHENVRILDGGL 126 (285)
T ss_pred HHHcCCCCCCEEEEECCC------CC-e---------ehHHHHHHHHHcCCCceEEecCCH
Confidence 65 34 68899999987 11 2 567899999999998 99999986
No 3
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=99.66 E-value=7.3e-16 Score=124.67 Aligned_cols=106 Identities=24% Similarity=0.208 Sum_probs=82.7
Q ss_pred CCCccCHHHHHHHhccCCCCeEEEeecC---------cchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHH
Q psy18174 13 LELCVSKSWLLQELRSDPSRLIILDCRS---------SNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKE 83 (144)
Q Consensus 13 ~~~~Is~~~L~~~l~~~~~~~~IlD~R~---------~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~ 83 (144)
...+|+++||+++|+ +++++|||+|. ..+|..||||||+|+++..+. .......+++|+++.++
T Consensus 20 ~~~lvs~~~L~~~l~--~~~~~IiDvr~~~~~~~r~~~~~y~~gHIPgAi~i~~~~~~-----~~~~~~~~~lp~~~~~~ 92 (320)
T PLN02723 20 NEPVVSVDWLHANLR--EPDVKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDLDGIS-----DRTTDLPHMLPSEEAFA 92 (320)
T ss_pred CCceecHHHHHHHhc--CCCeEEEEeeccccCCCCchHHHHHhccCCCCeecCHHHhc-----CCCCCcCCCCCCHHHHH
Confidence 346999999999998 56899999972 268999999999999986531 12345778999998887
Q ss_pred HHHhh--C-CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 84 KIMNA--Y-KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 84 ~l~~~--~-~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
++.+. + ++++|||||+. |. ..+.++...|+..|++ +++|.||
T Consensus 93 ~~l~~~Gi~~~~~VVvY~~~------g~----------~~a~r~~~~L~~~G~~~V~~LdGG 138 (320)
T PLN02723 93 AAVSALGIENKDGVVVYDGK------GI----------FSAARVWWMFRVFGHEKVWVLDGG 138 (320)
T ss_pred HHHHHcCCCCCCEEEEEcCC------Cc----------chHHHHHHHHHHcCCCceEEcCCC
Confidence 77653 3 57799999876 11 1345677889999997 9999987
No 4
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=99.65 E-value=9.7e-16 Score=133.11 Aligned_cols=106 Identities=25% Similarity=0.235 Sum_probs=85.1
Q ss_pred CCCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHh--hC-
Q psy18174 13 LELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMN--AY- 89 (144)
Q Consensus 13 ~~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~--~~- 89 (144)
+..+||++||+++|+ +++++|||+|+..+|..||||||+|+++..... +..+..+++|+.+.++.+.. ++
T Consensus 7 ~~~lIs~~eL~~~l~--~~~vvIIDvR~~~eY~~GHIPGAv~i~~~~~~~-----~~~~~~~~lp~~~~l~~~l~~lGI~ 79 (610)
T PRK09629 7 LSLVIEPNDLLERLD--APELILVDLTSSARYEAGHIRGARFVDPKRTQL-----GKPPAPGLLPDTADLEQLFGELGHN 79 (610)
T ss_pred CCceecHHHHHHHhc--CCCEEEEECCChHHHHhCCCCCcEEcChhHhhc-----cCCCCCCCCCCHHHHHHHHHHcCCC
Confidence 567899999999998 568999999999999999999999999865321 33456789998887766554 33
Q ss_pred CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 90 KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 90 ~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
++++|||||+. |. ..+.++...|+..|++ +++|.||
T Consensus 80 ~d~~VVvYd~~------g~----------~~A~R~~w~L~~~G~~~V~iLdGG 116 (610)
T PRK09629 80 PDAVYVVYDDE------GG----------GWAGRFIWLLDVIGHSGYHYLDGG 116 (610)
T ss_pred CCCEEEEECCC------CC----------chHHHHHHHHHHcCCCCEEEcCCC
Confidence 58899999976 11 1456788899999997 8899997
No 5
>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily. Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.
Probab=99.64 E-value=1.7e-15 Score=102.93 Aligned_cols=98 Identities=22% Similarity=0.298 Sum_probs=69.8
Q ss_pred cCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEEE
Q psy18174 17 VSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFVV 96 (144)
Q Consensus 17 Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VVv 96 (144)
||++||+++++....+++|||+|+..+|..+|||||+|+++..+... . ...+.++..+.+.. . .+.+||+
T Consensus 1 is~~~l~~~l~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~-----~-~~~~~~~~~~~~~~---~-~~~~vv~ 70 (105)
T cd01525 1 ISVYDVIRLLDNSPAKLAAVDIRSSPDFRRGHIEGSINIPFSSVFLK-----E-GELEQLPTVPRLEN---Y-KGKIIVI 70 (105)
T ss_pred CCHHHHHHHHhCCCCCeEEEECCCHHHHhCCccCCCEeCCHHHhccc-----c-cccccccchHHHHh---h-cCCeEEE
Confidence 78999999998423478999999999999999999999998654210 0 11133443332222 1 3678999
Q ss_pred EcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 97 YGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 97 YD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
||+.+. .+..++..|...|+. +++|.||
T Consensus 71 ~c~~g~-----------------~s~~~a~~L~~~G~~~v~~l~GG 99 (105)
T cd01525 71 VSHSHK-----------------HAALFAAFLVKCGVPRVCILDGG 99 (105)
T ss_pred EeCCCc-----------------cHHHHHHHHHHcCCCCEEEEeCc
Confidence 997711 345566688889997 8899997
No 6
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=99.64 E-value=3e-15 Score=107.73 Aligned_cols=107 Identities=18% Similarity=0.064 Sum_probs=79.4
Q ss_pred cCHHHHHHHhccC--CCCeEEEeecCc--------chhcc------------CCCcCceecCCchhhHHhhhcccccccc
Q psy18174 17 VSKSWLLQELRSD--PSRLIILDCRSS--------NEYTE------------SHIRHAVNFSIPSIMLRRLAAGKIELLS 74 (144)
Q Consensus 17 Is~~~L~~~l~~~--~~~~~IlD~R~~--------~~y~~------------~HIpgAi~~~~~~~l~~r~~~~~~~~~~ 74 (144)
||++||+++++.. +++++|||+|+. .+|.. ||||||+|+++..+. .......+
T Consensus 1 vs~e~l~~~l~~~~~~~~~~iiD~r~~~~~~~~~~~~y~~~~~~~~~~~~~~GHIPgAv~~~~~~~~-----~~~~~~~~ 75 (138)
T cd01445 1 KSTEQLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASFFDFEECL-----DEAGFEES 75 (138)
T ss_pred CCHHHHHHHhhccccCCCeEEEEccCCCccCcchhhhhcccCCCCCcCCCcCCcCCCCEeeCHHHhh-----CcCCCCCC
Confidence 6899999999831 257999999987 88998 999999999986542 12335678
Q ss_pred ccCCHHHHHHHHh--hC-CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeeccc
Q psy18174 75 TIKCRELKEKIMN--AY-KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVLK 142 (144)
Q Consensus 75 ~lp~~~~~~~l~~--~~-~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~~ 142 (144)
++|+++.++.+.. ++ ++++||+||+. .. | ...+..+...|+..|++ +.+|.||-
T Consensus 76 ~~p~~~~~~~~~~~~GI~~~~~vVvY~~~-~~---~----------g~~A~r~~~~l~~~G~~~v~ildGG~ 133 (138)
T cd01445 76 MEPSEAEFAAMFEAKGIDLDKHLIATDGD-DL---G----------GFTACHIALAARLCGHPDVAILDGGF 133 (138)
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEECCC-CC---c----------chHHHHHHHHHHHcCCCCeEEeCCCH
Confidence 8888877766654 34 58899999963 10 0 11456677788899998 88999973
No 7
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=99.62 E-value=3.7e-15 Score=118.37 Aligned_cols=106 Identities=24% Similarity=0.263 Sum_probs=80.4
Q ss_pred CCCccCHHHHHHHhccCCCCeEEEeecC----------cchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHH
Q psy18174 13 LELCVSKSWLLQELRSDPSRLIILDCRS----------SNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELK 82 (144)
Q Consensus 13 ~~~~Is~~~L~~~l~~~~~~~~IlD~R~----------~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~ 82 (144)
+..+|+++||.++++ +++++|||||+ ..+|..||||||+|+++..+ .....++++++++++.+
T Consensus 3 ~~~lvs~~~l~~~l~--~~~~~iiD~R~~~~~~~~~~~~~~y~~GHIpGA~~~~~~~~-----~~~~~~~~~~~~~~~~~ 75 (281)
T PRK11493 3 TTWFVAADWLAEHID--DPEIQIIDARMAPPGQEDRDVAAEYRAGHIPGAVFFDIEAL-----SDHTSPLPHMMPRPETF 75 (281)
T ss_pred cCcccCHHHHHHhcC--CCCeEEEEeeCCCCCccccchHHHHHhCcCCCCEEcCHHHh-----cCCCCCCCCCCCCHHHH
Confidence 457899999999998 66899999996 57899999999999987543 12334567888888877
Q ss_pred HHHHhh--C-CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 83 EKIMNA--Y-KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 83 ~~l~~~--~-~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
+.+... + ++++|||||+. . . ..+..+...|...|++ +.++.||
T Consensus 76 ~~~~~~~Gi~~d~~VVvyc~~-~-----~----------~~a~~~~~~l~~~G~~~v~~l~GG 122 (281)
T PRK11493 76 AVAMRELGVNQDKHLVVYDEG-N-----L----------FSAPRAWWMLRTFGVEKVSILAGG 122 (281)
T ss_pred HHHHHHcCCCCCCEEEEECCC-C-----C----------chHHHHHHHHHHhcCCcEEEcCCC
Confidence 666553 3 58899999976 1 1 0234566678888998 8888876
No 8
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=99.60 E-value=5.6e-15 Score=100.12 Aligned_cols=93 Identities=18% Similarity=0.178 Sum_probs=67.6
Q ss_pred CccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEE
Q psy18174 15 LCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLF 94 (144)
Q Consensus 15 ~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~V 94 (144)
..|++++|.++++ +++++|||+|+..+|..+|||||+|+++..+. ... .....+....++.+|
T Consensus 2 ~~is~~~l~~~~~--~~~~~iiDvR~~~e~~~ghi~gA~~ip~~~~~-~~~--------------~~~~~~~~~~~~~~i 64 (101)
T cd01518 2 TYLSPAEWNELLE--DPEVVLLDVRNDYEYDIGHFKGAVNPDVDTFR-EFP--------------FWLDENLDLLKGKKV 64 (101)
T ss_pred CcCCHHHHHHHHc--CCCEEEEEcCChhhhhcCEeccccCCCcccHh-HhH--------------HHHHhhhhhcCCCEE
Confidence 3689999999998 56899999999999999999999999987641 100 001111111257799
Q ss_pred EEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 95 VVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 95 VvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
||||+. |. .....+..|...||+ ++.|.||
T Consensus 65 vvyC~~------G~-----------rs~~a~~~L~~~G~~~v~~l~GG 95 (101)
T cd01518 65 LMYCTG------GI-----------RCEKASAYLKERGFKNVYQLKGG 95 (101)
T ss_pred EEECCC------ch-----------hHHHHHHHHHHhCCcceeeechh
Confidence 999977 22 333455678889996 9999997
No 9
>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.
Probab=99.58 E-value=2e-14 Score=96.43 Aligned_cols=90 Identities=14% Similarity=0.137 Sum_probs=65.2
Q ss_pred cCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEEE
Q psy18174 17 VSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFVV 96 (144)
Q Consensus 17 Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VVv 96 (144)
||+++|.+++....++++|||+|+..+|..+|||||+|+++..+. ... ..+. ...+.+||+
T Consensus 1 is~~~l~~~~~~~~~~~~liDvR~~~e~~~ghipga~~ip~~~l~-~~~-----------------~~~~-~~~~~~iv~ 61 (95)
T cd01534 1 IGAAELARWAAEGDRTVYRFDVRTPEEYEAGHLPGFRHTPGGQLV-QET-----------------DHFA-PVRGARIVL 61 (95)
T ss_pred CCHHHHHHHHHcCCCCeEEEECCCHHHHHhCCCCCcEeCCHHHHH-HHH-----------------HHhc-ccCCCeEEE
Confidence 689999999984223688999999999999999999999875432 110 0010 113678999
Q ss_pred EcCCCCccccccccccccCCCccHHHHHHHHHHhcCceeEEeeccc
Q psy18174 97 YGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVVCLLVLK 142 (144)
Q Consensus 97 YD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~~ 142 (144)
||+. |. .+......|...||+++.|.||-
T Consensus 62 ~c~~------G~-----------rs~~aa~~L~~~G~~v~~l~GG~ 90 (95)
T cd01534 62 ADDD------GV-----------RADMTASWLAQMGWEVYVLEGGL 90 (95)
T ss_pred ECCC------CC-----------hHHHHHHHHHHcCCEEEEecCcH
Confidence 9977 21 33445667888999988899973
No 10
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=99.57 E-value=3.5e-14 Score=99.10 Aligned_cols=103 Identities=27% Similarity=0.229 Sum_probs=78.2
Q ss_pred ccCHHHHHHHhccCCCCeEEEeecCc-------chhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhh
Q psy18174 16 CVSKSWLLQELRSDPSRLIILDCRSS-------NEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNA 88 (144)
Q Consensus 16 ~Is~~~L~~~l~~~~~~~~IlD~R~~-------~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~ 88 (144)
+|++++|.++++ +.+.+|||+|+. .+|..+|||||+|+++.++.. + .....+++++.+.+..+...
T Consensus 1 ~i~~~~l~~~l~--~~~~~ivDvR~~~~~~~~~~~~~~ghI~ga~~i~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~ 73 (122)
T cd01448 1 LVSPDWLAEHLD--DPDVRILDARWYLPDRDGRKEYLEGHIPGAVFFDLDEDLD-D----KSPGPHMLPSPEEFAELLGS 73 (122)
T ss_pred CcCHHHHHHHhC--CCCeEEEEeecCCCCCchhhHHhhCCCCCCEEcChhhccc-c----CCCCCCCCCCHHHHHHHHHH
Confidence 589999999998 457899999999 999999999999999876421 1 12345688887776555432
Q ss_pred --C-CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 89 --Y-KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 89 --~-~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
. .+.+||+||+. |. ..+..+...|...|++ ++++.||
T Consensus 74 ~~~~~~~~vv~~c~~------g~----------~~a~~~~~~l~~~G~~~v~~l~GG 114 (122)
T cd01448 74 LGISNDDTVVVYDDG------GG----------FFAARAWWTLRYFGHENVRVLDGG 114 (122)
T ss_pred cCCCCCCEEEEECCC------CC----------ccHHHHHHHHHHcCCCCEEEecCC
Confidence 2 57899999977 11 1455667788889988 9999987
No 11
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=99.57 E-value=8.2e-15 Score=103.79 Aligned_cols=106 Identities=24% Similarity=0.242 Sum_probs=69.9
Q ss_pred cCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhc------cc---cccccccCCHHHH---HH
Q psy18174 17 VSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAA------GK---IELLSTIKCRELK---EK 84 (144)
Q Consensus 17 Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~------~~---~~~~~~lp~~~~~---~~ 84 (144)
||++||.++++ + +.+|||+|...+|..||||||+|+++.....+.... +. ..+.+.+++++.. +.
T Consensus 1 ~s~~el~~~l~--~-~~~iiDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (128)
T cd01520 1 ITAEDLLALRK--A-DGPLIDVRSPKEFFEGHLPGAINLPLLDDEERALVGTLYKQQGREAAIELGLELVSGKLKRILNE 77 (128)
T ss_pred CCHHHHHHHHh--c-CCEEEECCCHHHhccCcCCCcEEccCCChhHHHHhhhheeccCHHHHHHHHHHHHhhhHHHHHHH
Confidence 78999999997 2 578999999999999999999999986542211100 00 0112223333221 22
Q ss_pred HH-hhC-CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCceeEEeecc
Q psy18174 85 IM-NAY-KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVVCLLVL 141 (144)
Q Consensus 85 l~-~~~-~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~ 141 (144)
+. .++ ++++|||||+. + |. .+..+...|...||+++.|.||
T Consensus 78 ~~~~~i~~~~~vvvyC~~-~----G~-----------rs~~a~~~L~~~G~~v~~L~GG 120 (128)
T cd01520 78 AWEARLERDPKLLIYCAR-G----GM-----------RSQSLAWLLESLGIDVPLLEGG 120 (128)
T ss_pred HHHhccCCCCeEEEEeCC-C----Cc-----------cHHHHHHHHHHcCCceeEeCCc
Confidence 22 133 57899999974 1 11 3445557788889999999998
No 12
>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family.; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A ....
Probab=99.56 E-value=1.2e-14 Score=98.91 Aligned_cols=99 Identities=24% Similarity=0.233 Sum_probs=64.9
Q ss_pred CHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHH----HHhh-CCCC
Q psy18174 18 SKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEK----IMNA-YKDS 92 (144)
Q Consensus 18 s~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~----l~~~-~~~~ 92 (144)
||+||+++++ +++++|||||+..+|..||||||+|+++..+. ............. .... .+++
T Consensus 1 s~~el~~~l~--~~~~~liD~R~~~~~~~~hI~ga~~i~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (113)
T PF00581_consen 1 SPEELKEMLE--NESVLLIDVRSPEEYERGHIPGAVNIPFPSLD----------PDEPSLSEDKLDEFLKELGKKIDKDK 68 (113)
T ss_dssp -HHHHHHHHT--TTTEEEEEESSHHHHHHSBETTEEEEEGGGGS----------SSSSBCHHHHHHHHHHHHTHGSTTTS
T ss_pred CHHHHHhhhh--CCCeEEEEeCCHHHHHcCCCCCCccccccccc----------cccccccccccccccccccccccccc
Confidence 6899999995 67999999999999999999999999986640 0011111121111 1112 2577
Q ss_pred EEEEEcCCCCccccccccccccCCCccHH-HHHHHHHHhcCc-eeEEeecc
Q psy18174 93 LFVVYGDSCMSEVEVRDREKHCYTASDTM-NVLTKRLQQDGC-QVVCLLVL 141 (144)
Q Consensus 93 ~VVvYD~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~L~~~g~-~~~~l~G~ 141 (144)
+||+||..+.+ . ...+ ..+...|.+.|+ ++++|+||
T Consensus 69 ~iv~yc~~~~~------~-------~~~~~~~~~~~l~~~g~~~v~~l~GG 106 (113)
T PF00581_consen 69 DIVFYCSSGWR------S-------GSAAAARVAWILKKLGFKNVYILDGG 106 (113)
T ss_dssp EEEEEESSSCH------H-------HHHHHHHHHHHHHHTTTSSEEEETTH
T ss_pred cceeeeecccc------c-------chhHHHHHHHHHHHcCCCCEEEecCh
Confidence 99999955111 0 1122 234445777899 59999997
No 13
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=99.55 E-value=2.9e-14 Score=98.71 Aligned_cols=97 Identities=27% Similarity=0.262 Sum_probs=73.8
Q ss_pred cCHHHHHHHhccCCCCeEEEeecCcchhcc-----------CCCcCceecCCchhhHHhhhccccccccccCCHHHHHHH
Q psy18174 17 VSKSWLLQELRSDPSRLIILDCRSSNEYTE-----------SHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKI 85 (144)
Q Consensus 17 Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~-----------~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l 85 (144)
|++++|.++++ +.+++|||+|+..+|.. ||||||+|+++..+.. . .+.+++++.+..+
T Consensus 1 ~s~~~l~~~l~--~~~~~iiDvR~~~e~~~~~~~~~~~~~~ghIpgA~~~p~~~~~~------~---~~~~~~~~~~~~~ 69 (118)
T cd01449 1 VTAEEVLANLD--SGDVQLVDARSPERFRGEVPEPRPGLRSGHIPGAVNIPWTSLLD------E---DGTFKSPEELRAL 69 (118)
T ss_pred CCHHHHHHhcC--CCCcEEEeCCCHHHcCCcCCCCCCCCcCCcCCCCcccChHHhcC------C---CCCcCCHHHHHHH
Confidence 68899999997 45689999999998876 9999999999876421 1 1567777766554
Q ss_pred Hhh--C-CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 86 MNA--Y-KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 86 ~~~--~-~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
... . ++++||+||+. |. .+..+...|...|++ ++.+.||
T Consensus 70 ~~~~~~~~~~~iv~yc~~------g~-----------~s~~~~~~l~~~G~~~v~~l~GG 112 (118)
T cd01449 70 FAALGITPDKPVIVYCGS------GV-----------TACVLLLALELLGYKNVRLYDGS 112 (118)
T ss_pred HHHcCCCCCCCEEEECCc------HH-----------HHHHHHHHHHHcCCCCeeeeCCh
Confidence 442 2 57799999976 21 455667788999996 8888887
No 14
>KOG1717|consensus
Probab=99.55 E-value=3.1e-15 Score=117.15 Aligned_cols=114 Identities=28% Similarity=0.510 Sum_probs=98.2
Q ss_pred CccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEE
Q psy18174 15 LCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLF 94 (144)
Q Consensus 15 ~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~V 94 (144)
..+|++||...+. -.+++++|||+ +..||.+|+|+.++.+++||++.|..+++.++|.......+-..++..+|
T Consensus 4 ~~~s~~wlnr~l~--~~nllllDCRs----es~~i~~A~~valPalmlrrl~~g~l~~ra~~p~~~d~~~~~~~c~~v~v 77 (343)
T KOG1717|consen 4 ISKSVAWLNRQLE--LGNLLLLDCRS----ESSHIESAINVALPALMLRRLTGGNLPVRALFPRSCDDKRFPARCGTVTV 77 (343)
T ss_pred HHHHHHHHHhhcc--cCceEEEecCC----ccchhhhhhhhcchHHHHHHHhCCCCcceeccCCccccccccccCCccee
Confidence 3579999999999 56899999999 78899999999999999999999999999999987766555445567899
Q ss_pred EEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCceeEEeecc
Q psy18174 95 VVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVVCLLVL 141 (144)
Q Consensus 95 VvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~ 141 (144)
|.||+. + +.|++. .+++++++.++++++.+|+.+++|.||
T Consensus 78 ilyD~~-~-----~e~e~~-~~~~s~Lg~ll~kl~~~g~~a~yL~gg 117 (343)
T KOG1717|consen 78 ILYDES-S-----AEWEEE-TGAESVLGLLLKKLKDEGCSARYLSGG 117 (343)
T ss_pred eecccc-c-----cccccc-chhhhHHHHHHHHHHhcCcchhhhhcc
Confidence 999988 3 357665 455889999999999999999999987
No 15
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=99.55 E-value=2.1e-14 Score=97.00 Aligned_cols=94 Identities=18% Similarity=0.149 Sum_probs=67.2
Q ss_pred cCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEEE
Q psy18174 17 VSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFVV 96 (144)
Q Consensus 17 Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VVv 96 (144)
|++++|.+.++. +.+.+|||+|+..+|..+|||||+|+++..+.... +...+ ..+...-++++||+
T Consensus 1 is~~el~~~l~~-~~~~~liDvR~~~e~~~ghi~ga~~ip~~~~~~~~-----------~~~~~--~~~~~~~~~~~ivv 66 (100)
T cd01523 1 LDPEDLYARLLA-GQPLFILDVRNESDYERWKIDGENNTPYFDPYFDF-----------LEIEE--DILDQLPDDQEVTV 66 (100)
T ss_pred CCHHHHHHHHHc-CCCcEEEEeCCHHHHhhcccCCCcccccccchHHH-----------HHhhH--HHHhhCCCCCeEEE
Confidence 689999999984 35689999999999999999999999876542110 00000 00111115779999
Q ss_pred EcCCCCccccccccccccCCCccHHHHHHHHHHhcCceeEEeecc
Q psy18174 97 YGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVVCLLVL 141 (144)
Q Consensus 97 YD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~ 141 (144)
||.. |. .+..+...|.+.||++++|+||
T Consensus 67 ~C~~------G~-----------rs~~aa~~L~~~G~~~~~l~GG 94 (100)
T cd01523 67 ICAK------EG-----------SSQFVAELLAERGYDVDYLAGG 94 (100)
T ss_pred EcCC------CC-----------cHHHHHHHHHHcCceeEEeCCc
Confidence 9977 11 4456677888999999999997
No 16
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=99.53 E-value=7.1e-14 Score=95.98 Aligned_cols=92 Identities=20% Similarity=0.133 Sum_probs=67.9
Q ss_pred CCCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCC
Q psy18174 13 LELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDS 92 (144)
Q Consensus 13 ~~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~ 92 (144)
....|++++|.+.++. +.+++|||+|+..+|..+|||||+|+++..+. .+ ...+. ..++.
T Consensus 8 ~~~~i~~~~l~~~~~~-~~~~~liDvR~~~e~~~ghIpgainip~~~l~-~~-----------------~~~l~-~~~~~ 67 (109)
T cd01533 8 HTPSVSADELAALQAR-GAPLVVLDGRRFDEYRKMTIPGSVSCPGAELV-LR-----------------VGELA-PDPRT 67 (109)
T ss_pred cCCcCCHHHHHHHHhc-CCCcEEEeCCCHHHHhcCcCCCceeCCHHHHH-HH-----------------HHhcC-CCCCC
Confidence 3578999999999974 33688999999999999999999999986541 11 01110 01367
Q ss_pred EEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce--eEEeecc
Q psy18174 93 LFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ--VVCLLVL 141 (144)
Q Consensus 93 ~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~--~~~l~G~ 141 (144)
+|||||+. |. .+......|...||+ +++|.||
T Consensus 68 ~ivv~C~~------G~-----------rs~~a~~~L~~~G~~~~v~~l~gG 101 (109)
T cd01533 68 PIVVNCAG------RT-----------RSIIGAQSLINAGLPNPVAALRNG 101 (109)
T ss_pred eEEEECCC------Cc-----------hHHHHHHHHHHCCCCcceeEecCC
Confidence 99999977 11 344566788899994 8899997
No 17
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=99.52 E-value=1.2e-13 Score=95.20 Aligned_cols=94 Identities=21% Similarity=0.273 Sum_probs=69.6
Q ss_pred CCCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCC
Q psy18174 13 LELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDS 92 (144)
Q Consensus 13 ~~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~ 92 (144)
....|++++|.+++....++++|||+|+..+|..+|||||+|++...+.... +...-++.
T Consensus 6 ~~~~~s~~el~~~l~~~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~l~~~~--------------------~~~i~~~~ 65 (110)
T cd01521 6 LAFETDCWDVAIALKNGKPDFVLVDVRSAEAYARGHVPGAINLPHREICENA--------------------TAKLDKEK 65 (110)
T ss_pred eeeecCHHHHHHHHHcCCCCEEEEECCCHHHHhcCCCCCCEeCCHHHhhhHh--------------------hhcCCCCC
Confidence 4567999999999984224689999999999999999999999875531000 00111577
Q ss_pred EEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCceeEEeecc
Q psy18174 93 LFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVVCLLVL 141 (144)
Q Consensus 93 ~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~ 141 (144)
+||+||+. |. ...+..+...|...|+++++|.||
T Consensus 66 ~vvvyc~~------g~---------~~~s~~~a~~l~~~G~~v~~l~GG 99 (110)
T cd01521 66 LFVVYCDG------PG---------CNGATKAALKLAELGFPVKEMIGG 99 (110)
T ss_pred eEEEEECC------CC---------CchHHHHHHHHHHcCCeEEEecCC
Confidence 99999976 11 014566778888999999999987
No 18
>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily. They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR).
Probab=99.50 E-value=1.7e-13 Score=96.43 Aligned_cols=44 Identities=36% Similarity=0.533 Sum_probs=38.4
Q ss_pred ccCHHHHHHHhccC----CCCeEEEeecCcchhccCCCcCceecCCch
Q psy18174 16 CVSKSWLLQELRSD----PSRLIILDCRSSNEYTESHIRHAVNFSIPS 59 (144)
Q Consensus 16 ~Is~~~L~~~l~~~----~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~ 59 (144)
.|++++|.+++++. .++++|||+|...+|..||||||+|+++.+
T Consensus 3 ~Is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghI~gA~~ip~~~ 50 (121)
T cd01530 3 RISPETLARLLQGKYDNFFDKYIIIDCRFPYEYNGGHIKGAVNLSTKD 50 (121)
T ss_pred ccCHHHHHHHHhcccccCCCCEEEEECCCHHHHhCCcCCCCEeCCcHH
Confidence 58999999999842 147899999999999999999999999863
No 19
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=99.49 E-value=2.1e-13 Score=92.62 Aligned_cols=95 Identities=17% Similarity=0.107 Sum_probs=69.1
Q ss_pred CHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhh--C-CCCEE
Q psy18174 18 SKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNA--Y-KDSLF 94 (144)
Q Consensus 18 s~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~--~-~~~~V 94 (144)
|+++|.++++. .++++|||+|+..+|..||||||+|+++..+. . ...++++.+..+.+. . ++++|
T Consensus 2 ~~~~~~~~l~~-~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~i 69 (106)
T cd01519 2 SFEEVKNLPNP-HPNKVLIDVREPEELKTGKIPGAINIPLSSLP-D----------ALALSEEEFEKKYGFPKPSKDKEL 69 (106)
T ss_pred cHHHHHHhcCC-CCCEEEEECCCHHHHhcCcCCCcEEechHHhh-h----------hhCCCHHHHHHHhcccCCCCCCeE
Confidence 67899998862 24699999999999999999999999876531 1 122344445444432 2 47799
Q ss_pred EEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 95 VVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 95 VvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
|+||.. |. .+..+...|...||+ ++.+.||
T Consensus 70 vv~c~~------g~-----------~s~~~~~~l~~~G~~~v~~~~Gg 100 (106)
T cd01519 70 IFYCKA------GV-----------RSKAAAELARSLGYENVGNYPGS 100 (106)
T ss_pred EEECCC------cH-----------HHHHHHHHHHHcCCccceecCCc
Confidence 999976 11 455667888899996 8888887
No 20
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=99.49 E-value=1.8e-13 Score=90.97 Aligned_cols=85 Identities=22% Similarity=0.243 Sum_probs=63.5
Q ss_pred cCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEEE
Q psy18174 17 VSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFVV 96 (144)
Q Consensus 17 Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VVv 96 (144)
++++||.++++ ++.+|||+|+..+|..+|||||+|+++..+ ... +.....+.+||+
T Consensus 1 ~~~~e~~~~~~---~~~~iiD~R~~~~~~~~hipgA~~ip~~~~-~~~--------------------~~~~~~~~~vvl 56 (90)
T cd01524 1 VQWHELDNYRA---DGVTLIDVRTPQEFEKGHIKGAINIPLDEL-RDR--------------------LNELPKDKEIIV 56 (90)
T ss_pred CCHHHHHHHhc---CCCEEEECCCHHHHhcCCCCCCEeCCHHHH-HHH--------------------HHhcCCCCcEEE
Confidence 57899999985 367899999999999999999999987553 111 101114679999
Q ss_pred EcCCCCccccccccccccCCCccHHHHHHHHHHhcCceeEEeeccc
Q psy18174 97 YGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVVCLLVLK 142 (144)
Q Consensus 97 YD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~~ 142 (144)
|++. |. .+......|++.|+++..|.||-
T Consensus 57 ~c~~------g~-----------~a~~~a~~L~~~G~~v~~l~GG~ 85 (90)
T cd01524 57 YCAV------GL-----------RGYIAARILTQNGFKVKNLDGGY 85 (90)
T ss_pred EcCC------Ch-----------hHHHHHHHHHHCCCCEEEecCCH
Confidence 9876 11 34455668889999999999984
No 21
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.
Probab=99.47 E-value=3.2e-13 Score=91.48 Aligned_cols=91 Identities=16% Similarity=0.168 Sum_probs=65.7
Q ss_pred cCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEEE
Q psy18174 17 VSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFVV 96 (144)
Q Consensus 17 Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VVv 96 (144)
|++++|.++++..+.+++|||+|+..+|..+|||||+|+++..+. .. ...+....++++||+
T Consensus 2 i~~~~l~~~~~~~~~~~~iiDvR~~~e~~~~hI~ga~~ip~~~~~-~~-----------------~~~~~~~~~~~~vv~ 63 (101)
T cd01528 2 ISVAELAEWLADEREEPVLIDVREPEELEIAFLPGFLHLPMSEIP-ER-----------------SKELDSDNPDKDIVV 63 (101)
T ss_pred CCHHHHHHHHhcCCCCCEEEECCCHHHHhcCcCCCCEecCHHHHH-HH-----------------HHHhcccCCCCeEEE
Confidence 789999999985213688999999999999999999999976541 10 011111114779999
Q ss_pred EcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeeccc
Q psy18174 97 YGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVLK 142 (144)
Q Consensus 97 YD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~~ 142 (144)
||+. |. .+...+..|.+.|+. +++|+||-
T Consensus 64 ~c~~------g~-----------rs~~~~~~l~~~G~~~v~~l~GG~ 93 (101)
T cd01528 64 LCHH------GG-----------RSMQVAQWLLRQGFENVYNLQGGI 93 (101)
T ss_pred EeCC------Cc-----------hHHHHHHHHHHcCCccEEEecCCH
Confidence 9977 11 344556677778996 88999983
No 22
>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain. This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.
Probab=99.47 E-value=4.1e-13 Score=90.51 Aligned_cols=94 Identities=18% Similarity=0.066 Sum_probs=64.6
Q ss_pred cCHHHHHHHhccCCCCeEEEeecCcchh-ccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEE
Q psy18174 17 VSKSWLLQELRSDPSRLIILDCRSSNEY-TESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFV 95 (144)
Q Consensus 17 Is~~~L~~~l~~~~~~~~IlD~R~~~~y-~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VV 95 (144)
|++++|.+.++ +++++|||+|+..+| ..||||||+|+++..+- ... .....+... ..-++++||
T Consensus 1 is~~el~~~~~--~~~~~iiDvR~~~~~~~~ghIpga~~ip~~~~~-~~~-~~~~~~~~~-----------~~~~~~~iv 65 (103)
T cd01447 1 LSPEDARALLG--SPGVLLVDVRDPRELERTGMIPGAFHAPRGMLE-FWA-DPDSPYHKP-----------AFAEDKPFV 65 (103)
T ss_pred CCHHHHHHHHh--CCCeEEEECCCHHHHHhcCCCCCcEEcccchhh-hhc-Ccccccccc-----------CCCCCCeEE
Confidence 68999999998 467899999999888 57999999999975531 111 011000000 011577999
Q ss_pred EEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeeccc
Q psy18174 96 VYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVLK 142 (144)
Q Consensus 96 vYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~~ 142 (144)
|||+. |. .+......|...|++ ++++.||-
T Consensus 66 v~c~~------g~-----------~s~~~~~~l~~~G~~~v~~l~Gg~ 96 (103)
T cd01447 66 FYCAS------GW-----------RSALAGKTLQDMGLKPVYNIEGGF 96 (103)
T ss_pred EEcCC------CC-----------cHHHHHHHHHHcChHHhEeecCcH
Confidence 99976 11 334556788889998 88999873
No 23
>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1. This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.
Probab=99.46 E-value=6.7e-13 Score=92.63 Aligned_cols=95 Identities=14% Similarity=0.086 Sum_probs=67.8
Q ss_pred cCHHHHHHHhccCCCCeEEEeecCcchhc-cCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhh-CCCCEE
Q psy18174 17 VSKSWLLQELRSDPSRLIILDCRSSNEYT-ESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNA-YKDSLF 94 (144)
Q Consensus 17 Is~~~L~~~l~~~~~~~~IlD~R~~~~y~-~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~-~~~~~V 94 (144)
||+++|.+++++ +++.+|||+|+..+|. .+|||||+|+++.++.. ..++......+... .++++|
T Consensus 1 is~~el~~~l~~-~~~~~vIDvR~~~e~~~~ghIpgA~~ip~~~~~~------------~~~~~~~~~~l~~~~~~~~~i 67 (117)
T cd01522 1 LTPAEAWALLQA-DPQAVLVDVRTEAEWKFVGGVPDAVHVAWQVYPD------------MEINPNFLAELEEKVGKDRPV 67 (117)
T ss_pred CCHHHHHHHHHh-CCCeEEEECCCHHHHhcccCCCCceecchhhccc------------cccCHHHHHHHHhhCCCCCeE
Confidence 689999999984 3579999999999999 99999999999865420 11111111222221 257799
Q ss_pred EEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 95 VVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 95 VvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
|+||+.+. .+......|+..||. ++.+.||
T Consensus 68 vv~C~~G~-----------------rs~~aa~~L~~~G~~~v~~l~gG 98 (117)
T cd01522 68 LLLCRSGN-----------------RSIAAAEAAAQAGFTNVYNVLEG 98 (117)
T ss_pred EEEcCCCc-----------------cHHHHHHHHHHCCCCeEEECcCc
Confidence 99997711 344567788899997 7778776
No 24
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=99.45 E-value=4.8e-13 Score=89.78 Aligned_cols=88 Identities=16% Similarity=0.197 Sum_probs=60.8
Q ss_pred HHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEEEEc
Q psy18174 19 KSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFVVYG 98 (144)
Q Consensus 19 ~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VVvYD 98 (144)
++||.+. +++++|||+|+..+|..+|||||+|+++..+. +..+.++.+....++++||+||
T Consensus 3 ~~~l~~~----~~~~~iiDvR~~~~~~~~hIpgA~~ip~~~~~---------------~~~~~~~~~~~~~~~~~ivv~c 63 (96)
T cd01529 3 ADWLGEH----EPGTALLDVRAEDEYAAGHLPGKRSIPGAALV---------------LRSQELQALEAPGRATRYVLTC 63 (96)
T ss_pred hHHHhcC----CCCeEEEeCCCHHHHcCCCCCCcEeCCHHHhc---------------CCHHHHHHhhcCCCCCCEEEEe
Confidence 4566542 45789999999999999999999999875431 1122222222222577999999
Q ss_pred CCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeeccc
Q psy18174 99 DSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVLK 142 (144)
Q Consensus 99 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~~ 142 (144)
+. |. .+...+..|...|++ +++|.||-
T Consensus 64 ~~------g~-----------~s~~~~~~l~~~G~~~v~~l~GG~ 91 (96)
T cd01529 64 DG------SL-----------LARFAAQELLALGGKPVALLDGGT 91 (96)
T ss_pred CC------hH-----------HHHHHHHHHHHcCCCCEEEeCCCH
Confidence 76 11 345566778889995 99999973
No 25
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=99.44 E-value=7.2e-13 Score=88.34 Aligned_cols=85 Identities=24% Similarity=0.290 Sum_probs=66.1
Q ss_pred cCHHHHHHHhccCCCCeEEEeecCcchhcc--CCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhC-CCCE
Q psy18174 17 VSKSWLLQELRSDPSRLIILDCRSSNEYTE--SHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAY-KDSL 93 (144)
Q Consensus 17 Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~--~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~-~~~~ 93 (144)
|++++|.++++. +.+.+|||+|+..+|.. +|||||+|+++..+. . +...+ ++++
T Consensus 2 i~~~~~~~~~~~-~~~~~ivDvR~~~e~~~~~~hi~ga~~ip~~~~~-~---------------------~~~~~~~~~~ 58 (96)
T cd01444 2 ISVDELAELLAA-GEAPVLLDVRDPASYAALPDHIPGAIHLDEDSLD-D---------------------WLGDLDRDRP 58 (96)
T ss_pred cCHHHHHHHHhc-CCCcEEEECCCHHHHhcccCCCCCCeeCCHHHHH-H---------------------HHhhcCCCCC
Confidence 789999999873 25689999999999999 999999999886531 1 00111 5779
Q ss_pred EEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 94 FVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 94 VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
|||||+. | ..+..++..|...||. +++|+||
T Consensus 59 ivv~c~~------g-----------~~s~~a~~~l~~~G~~~v~~l~gG 90 (96)
T cd01444 59 VVVYCYH------G-----------NSSAQLAQALREAGFTDVRSLAGG 90 (96)
T ss_pred EEEEeCC------C-----------ChHHHHHHHHHHcCCceEEEcCCC
Confidence 9999976 1 1566778888899996 8899997
No 26
>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.
Probab=99.44 E-value=7.8e-13 Score=89.03 Aligned_cols=86 Identities=15% Similarity=0.100 Sum_probs=64.8
Q ss_pred CccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEE
Q psy18174 15 LCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLF 94 (144)
Q Consensus 15 ~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~V 94 (144)
..|++++|.++++. . .+|||+|+..+|..+|||||+|+++.++. .. . . .++ ++++|
T Consensus 2 ~~i~~~el~~~~~~--~-~~liDvR~~~e~~~~hi~ga~~ip~~~~~-~~----~---~-~~~------------~~~~i 57 (99)
T cd01527 2 TTISPNDACELLAQ--G-AVLVDIREPDEYLRERIPGARLVPLSQLE-SE----G---L-PLV------------GANAI 57 (99)
T ss_pred CccCHHHHHHHHHC--C-CEEEECCCHHHHHhCcCCCCEECChhHhc-cc----c---c-CCC------------CCCcE
Confidence 46899999999983 3 78999999999999999999999987531 10 0 0 011 46799
Q ss_pred EEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 95 VVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 95 VvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
|+|++. |. .+..+...|.+.|+. ++.|.||
T Consensus 58 v~~c~~------g~-----------~s~~~~~~L~~~g~~~v~~l~gG 88 (99)
T cd01527 58 IFHCRS------GM-----------RTQQNAERLAAISAGEAYVLEGG 88 (99)
T ss_pred EEEeCC------Cc-----------hHHHHHHHHHHcCCccEEEeeCC
Confidence 999877 11 455667788888884 8889987
No 27
>PRK00162 glpE thiosulfate sulfurtransferase; Validated
Probab=99.43 E-value=9.5e-13 Score=90.22 Aligned_cols=87 Identities=17% Similarity=0.156 Sum_probs=65.0
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhC-CCC
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAY-KDS 92 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~-~~~ 92 (144)
...|++++|.+.++ +.+.+|||+|+..+|..+|||||+|+++..+. . +...+ .+.
T Consensus 4 ~~~is~~el~~~l~--~~~~~ivDvR~~~e~~~ghi~gA~~ip~~~l~-~---------------------~~~~~~~~~ 59 (108)
T PRK00162 4 FECINVEQAHQKLQ--EGGAVLVDIRDPQSFAMGHAPGAFHLTNDSLG-A---------------------FMRQADFDT 59 (108)
T ss_pred ccccCHHHHHHHHH--cCCCEEEEcCCHHHHhcCCCCCCeECCHHHHH-H---------------------HHHhcCCCC
Confidence 46799999999997 45688999999999999999999999865431 0 11111 466
Q ss_pred EEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 93 LFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 93 ~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
+||||+..+. .+......|...||. +++|+||
T Consensus 60 ~ivv~c~~g~-----------------~s~~a~~~L~~~G~~~v~~l~GG 92 (108)
T PRK00162 60 PVMVMCYHGN-----------------SSQGAAQYLLQQGFDVVYSIDGG 92 (108)
T ss_pred CEEEEeCCCC-----------------CHHHHHHHHHHCCchheEEecCC
Confidence 8999986611 233445578889997 8899987
No 28
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=99.42 E-value=5.2e-13 Score=88.13 Aligned_cols=86 Identities=31% Similarity=0.326 Sum_probs=59.5
Q ss_pred CCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHh--hCCCCEEEEEcCCCCccccc
Q psy18174 30 PSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMN--AYKDSLFVVYGDSCMSEVEV 107 (144)
Q Consensus 30 ~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~--~~~~~~VVvYD~~~~~~~~g 107 (144)
+++++|||+|+..+|..+|||||+|+++..+.... ...... .....+.. ..++++||+||.. |
T Consensus 2 ~~~~~ivDvR~~~e~~~~hi~ga~~i~~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~iv~~c~~------g 66 (100)
T smart00450 2 DEKVVLLDVRSPEEYEGGHIPGAVNIPLSELLDRR-----GELDIL----EFEELLKRLGLDKDKPVVVYCRS------G 66 (100)
T ss_pred CCCEEEEECCCHHHhccCCCCCceeCCHHHhccCC-----CCcCHH----HHHHHHHHcCCCCCCeEEEEeCC------C
Confidence 35789999999999999999999999987653211 011111 11111211 2257899999965 1
Q ss_pred cccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 108 RDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
. .+..+...|.+.|++ +++|+||
T Consensus 67 ~-----------~a~~~~~~l~~~G~~~v~~l~GG 90 (100)
T smart00450 67 N-----------RSAKAAWLLRELGFKNVYLLDGG 90 (100)
T ss_pred c-----------HHHHHHHHHHHcCCCceEEecCC
Confidence 1 446778888999998 9999997
No 29
>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily. This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.
Probab=99.42 E-value=9.4e-13 Score=92.32 Aligned_cols=97 Identities=19% Similarity=0.195 Sum_probs=69.1
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhh--CCC
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNA--YKD 91 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~--~~~ 91 (144)
...|++++|.+.+++ +++.+|||+|+..+|..+|||||+|+++..+. .+.. .++.. .+..+ ..+
T Consensus 7 ~~~is~~el~~~~~~-~~~~~ivDvR~~~e~~~~hIpgai~ip~~~~~-~~~~--------~~~~~----~~~~~~~~~~ 72 (122)
T cd01526 7 EERVSVKDYKNILQA-GKKHVLLDVRPKVHFEICRLPEAINIPLSELL-SKAA--------ELKSL----QELPLDNDKD 72 (122)
T ss_pred ccccCHHHHHHHHhC-CCCeEEEEcCCHHHhhcccCCCCeEccHHHHh-hhhh--------hhhhh----hhcccccCCC
Confidence 457999999999984 36789999999999999999999999986642 1110 01100 01111 157
Q ss_pred CEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCc--eeEEeecc
Q psy18174 92 SLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGC--QVVCLLVL 141 (144)
Q Consensus 92 ~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~--~~~~l~G~ 141 (144)
.+||+||+. |. .+...+..|+..|| +++++.||
T Consensus 73 ~~ivv~C~~------G~-----------rs~~aa~~L~~~G~~~~v~~l~GG 107 (122)
T cd01526 73 SPIYVVCRR------GN-----------DSQTAVRKLKELGLERFVRDIIGG 107 (122)
T ss_pred CcEEEECCC------CC-----------cHHHHHHHHHHcCCccceeeecch
Confidence 799999977 11 34456678999999 48999987
No 30
>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein. Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.
Probab=99.42 E-value=1.7e-12 Score=95.81 Aligned_cols=99 Identities=13% Similarity=0.004 Sum_probs=67.5
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcc----hhccC---------CCcCceecCCchhhHHhhhccccccccccCCHH
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSN----EYTES---------HIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRE 80 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~----~y~~~---------HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~ 80 (144)
...|+++||.++++ +++++|||+|+.. +|..| |||||+|+++... . .+.. +...
T Consensus 35 ~~~vs~~el~~~l~--~~~~~lIDVR~~~~~~~e~~~G~~~~~~~~~HIPGAv~ip~~~~--~-------~l~~--~~~~ 101 (162)
T TIGR03865 35 ARVLDTEAAQALLA--RGPVALIDVYPRPPKPKNLLEGTVWRDEPRLNIPGSLWLPNTGY--G-------NLAP--AWQA 101 (162)
T ss_pred ccccCHHHHHHHHh--CCCcEEEECCCCccccccccccceeccccCCCCCCcEEecccCC--C-------CCCC--chhH
Confidence 56899999999998 5678899999765 45444 9999999986321 0 0111 1112
Q ss_pred HH-HHHHh-h--CCCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 81 LK-EKIMN-A--YKDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 81 ~~-~~l~~-~--~~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
.+ +.+.. . .++++||+||.. |. ..+...++.|.+.||+ +++|.||
T Consensus 102 ~~~~~l~~~~~~~~d~~IVvYC~~------G~----------~~S~~aa~~L~~~G~~~V~~l~GG 151 (162)
T TIGR03865 102 YFRRGLERATGGDKDRPLVFYCLA------DC----------WMSWNAAKRALAYGYSNVYWYPDG 151 (162)
T ss_pred HHHHHHHHhcCCCCCCEEEEEECC------CC----------HHHHHHHHHHHhcCCcceEEecCC
Confidence 22 22322 1 268899999976 11 1455678888999998 9999997
No 31
>cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily. Also included in this CD are eukaryotic arsenate resistance proteins such as Saccharomyces cerevisiae Acr2p and similar proteins. Cdc25 phosphatases activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. The Cdc25 and Acr2p RHOD domains have the signature motif (H/YCxxxxxR).
Probab=99.40 E-value=3.2e-12 Score=88.42 Aligned_cols=98 Identities=18% Similarity=0.232 Sum_probs=64.1
Q ss_pred CccCHHHHHHHhccCC-----CCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhC
Q psy18174 15 LCVSKSWLLQELRSDP-----SRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAY 89 (144)
Q Consensus 15 ~~Is~~~L~~~l~~~~-----~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~ 89 (144)
..|++++|+++++. + ++++|||+|+. +|..+|||||+|+++..+ ..+. + +....+. ..
T Consensus 2 ~~is~~el~~~l~~-~~~~~~~~~~iiDvR~~-ef~~ghipgAi~ip~~~~-~~~~-----------~--~~~~~~~-~~ 64 (113)
T cd01443 2 KYISPEELVALLEN-SDSNAGKDFVVVDLRRD-DYEGGHIKGSINLPAQSC-YQTL-----------P--QVYALFS-LA 64 (113)
T ss_pred cccCHHHHHHHHhC-CccccCCcEEEEECCch-hcCCCcccCceecchhHH-HHHH-----------H--HHHHHhh-hc
Confidence 36899999999984 2 46899999999 999999999999988653 1111 0 1111111 12
Q ss_pred CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCc---eeEEeecc
Q psy18174 90 KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGC---QVVCLLVL 141 (144)
Q Consensus 90 ~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~---~~~~l~G~ 141 (144)
...+||+||..+. . .. ......+.+.|.+.|+ +++.|.||
T Consensus 65 ~~~~iv~~C~~~g-----~-rs------~~a~~~l~~~l~~~G~~~~~v~~l~GG 107 (113)
T cd01443 65 GVKLAIFYCGSSQ-----G-RG------PRAARWFADYLRKVGESLPKSYILTGG 107 (113)
T ss_pred CCCEEEEECCCCC-----c-cc------HHHHHHHHHHHhccCCCCCeEEEECCh
Confidence 4568999997511 0 00 0123344455666786 58999997
No 32
>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.
Probab=99.39 E-value=2.1e-12 Score=84.15 Aligned_cols=83 Identities=28% Similarity=0.337 Sum_probs=61.4
Q ss_pred HHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEEEEcCCC
Q psy18174 22 LLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFVVYGDSC 101 (144)
Q Consensus 22 L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VVvYD~~~ 101 (144)
|.+.++ ..+.+|||+|+..+|..+|||||+|+++....... .......++.||+||+.|
T Consensus 2 ~~~~~~--~~~~~iiD~R~~~~~~~~~i~ga~~~~~~~~~~~~-------------------~~~~~~~~~~vv~~c~~~ 60 (89)
T cd00158 2 LKELLD--DEDAVLLDVREPEEYAAGHIPGAINIPLSELEERA-------------------ALLELDKDKPIVVYCRSG 60 (89)
T ss_pred hHHHhc--CCCeEEEECCCHHHHhccccCCCEecchHHHhhHH-------------------HhhccCCCCeEEEEeCCC
Confidence 455565 56899999999999999999999999987642210 011112578999999771
Q ss_pred CccccccccccccCCCccHHHHHHHHHHhcCce-eEEeeccc
Q psy18174 102 MSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVLK 142 (144)
Q Consensus 102 ~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~~ 142 (144)
..+..+...|...|+. +++|+||-
T Consensus 61 -----------------~~a~~~~~~l~~~G~~~v~~l~gG~ 85 (89)
T cd00158 61 -----------------NRSARAAKLLRKAGGTNVYNLEGGM 85 (89)
T ss_pred -----------------chHHHHHHHHHHhCcccEEEecCCh
Confidence 1556678889999887 88999873
No 33
>cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily. Included in this CD is the Saccharomyces cerevisiae arsenate reductase protein, Acr2p, and other yeast and plant homologs.
Probab=99.38 E-value=6.5e-12 Score=86.79 Aligned_cols=45 Identities=18% Similarity=0.339 Sum_probs=38.6
Q ss_pred CccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchh
Q psy18174 15 LCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSI 60 (144)
Q Consensus 15 ~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~ 60 (144)
..|++++|.+++....++++|||+|+. +|..+|||||+|+++..+
T Consensus 2 ~~is~~~l~~~~~~~~~~~~iiDvR~~-e~~~~hi~gA~~ip~~~l 46 (113)
T cd01531 2 SYISPAQLKGWIRNGRPPFQVVDVRDE-DYAGGHIKGSWHYPSTRF 46 (113)
T ss_pred CcCCHHHHHHHHHcCCCCEEEEEcCCc-ccCCCcCCCCEecCHHHH
Confidence 478999999999742156889999999 999999999999998654
No 34
>KOG1529|consensus
Probab=99.34 E-value=8.1e-12 Score=98.73 Aligned_cols=108 Identities=19% Similarity=0.165 Sum_probs=84.6
Q ss_pred CCCccCHHHHHHHhccCCCCeEEEeecC---------cchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHH
Q psy18174 13 LELCVSKSWLLQELRSDPSRLIILDCRS---------SNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKE 83 (144)
Q Consensus 13 ~~~~Is~~~L~~~l~~~~~~~~IlD~R~---------~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~ 83 (144)
..++|++.|+.+.+. +..+.|||+.. ..+|...|||||.+|+++.. .+.+++.+|++|.++.|+
T Consensus 3 ~~~iv~~~~v~~~~~--~~~~~iLDaSw~~~~~~~~~~~e~~~~hipga~~fdld~~-----~~~s~~~~~~lp~~e~Fa 75 (286)
T KOG1529|consen 3 VDSIVSVKWVMENLG--NHGLRILDASWYFPPLRRIAEFEFLERHIPGASHFDLDII-----SYPSSPYRHMLPTAEHFA 75 (286)
T ss_pred cccccChHHHHHhCc--CCCeEEEeeeeecCchhhhhhhhhhhccCCCceeeecccc-----ccCCCcccccCccHHHHH
Confidence 357899999999999 57899999984 35899999999999998754 356789999999999988
Q ss_pred HHHh--hC-CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 84 KIMN--AY-KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 84 ~l~~--~~-~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
...+ ++ ++++|||||.. . .|. -.+..+...|+--|+. ++.|.||
T Consensus 76 ~y~~~lGi~n~d~vViYd~~-~---~Gm----------~~Asrv~W~fr~fGh~~VslL~GG 123 (286)
T KOG1529|consen 76 EYASRLGVDNGDHVVIYDRG-D---GGM----------FSASRVWWTFRVFGHTKVSLLNGG 123 (286)
T ss_pred HHHHhcCCCCCCeEEEEcCC-C---cce----------eehhhHHHHHHHhCccEEEEecCc
Confidence 8765 33 57799999974 1 021 1446777788888887 7777775
No 35
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=99.29 E-value=1.8e-11 Score=99.08 Aligned_cols=99 Identities=18% Similarity=0.132 Sum_probs=71.6
Q ss_pred CccCHHHHHHHhccCCCCeEEEeecCcchh-----------ccCCCcCceecCCchhhHHhhhccccccccccCCHHHHH
Q psy18174 15 LCVSKSWLLQELRSDPSRLIILDCRSSNEY-----------TESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKE 83 (144)
Q Consensus 15 ~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y-----------~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~ 83 (144)
.+++.+|+.+.++ +++.+|||+|+..+| ..||||||+|+++..++. . .+.+.+.+.++
T Consensus 190 ~~~~~~~v~~~~~--~~~~~iiD~R~~~ef~G~~~~~~~~~~~GHIPgAvnip~~~~~~-----~----~~~~~~~~el~ 258 (320)
T PLN02723 190 LVWTLEQVKKNIE--DKTYQHIDARSKARFDGAAPEPRKGIRSGHIPGSKCVPFPQMLD-----S----SQTLLPAEELK 258 (320)
T ss_pred ceecHHHHHHhhc--CCCeEEEECCCcccccCCCCCCCCCCcCCcCCCCcccCHHHhcC-----C----CCCCCCHHHHH
Confidence 4689999999998 557889999998777 579999999999876431 1 13566666655
Q ss_pred H-HHh-hC-CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 84 K-IMN-AY-KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 84 ~-l~~-~~-~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
. +.. ++ ++++||+||+. |. .+..+...|...||+ +.++.|+
T Consensus 259 ~~~~~~gi~~~~~iv~yC~s------G~-----------~A~~~~~~L~~~G~~~v~~YdGs 303 (320)
T PLN02723 259 KRFEQEGISLDSPIVASCGT------GV-----------TACILALGLHRLGKTDVPVYDGS 303 (320)
T ss_pred HHHHhcCCCCCCCEEEECCc------HH-----------HHHHHHHHHHHcCCCCeeEeCCC
Confidence 4 433 34 57899999977 22 445556667778997 7777775
No 36
>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.
Probab=99.29 E-value=1.5e-11 Score=82.10 Aligned_cols=78 Identities=24% Similarity=0.362 Sum_probs=56.4
Q ss_pred CCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEEEEcCCCCccccccc
Q psy18174 30 PSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFVVYGDSCMSEVEVRD 109 (144)
Q Consensus 30 ~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VVvYD~~~~~~~~g~~ 109 (144)
+++++|||+|+..+|..+|||||+|++...+.... ...++ .++++|||||+. |..
T Consensus 8 ~~~~~liDvR~~~e~~~~hi~ga~~ip~~~~~~~~--------~~~~~-----------~~~~~ivl~c~~------G~~ 62 (92)
T cd01532 8 REEIALIDVREEDPFAQSHPLWAANLPLSRLELDA--------WVRIP-----------RRDTPIVVYGEG------GGE 62 (92)
T ss_pred CCCeEEEECCCHHHHhhCCcccCeeCCHHHHHhhh--------HhhCC-----------CCCCeEEEEeCC------CCc
Confidence 45799999999999999999999999875531100 00011 137799999977 211
Q ss_pred cccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 110 REKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
+.+..+++.|.+.|++ +++|+||
T Consensus 63 ---------~~s~~aa~~L~~~G~~~v~~l~GG 86 (92)
T cd01532 63 ---------DLAPRAARRLSELGYTDVALLEGG 86 (92)
T ss_pred ---------hHHHHHHHHHHHcCccCEEEccCC
Confidence 1356777889999996 9999998
No 37
>PLN02160 thiosulfate sulfurtransferase
Probab=99.24 E-value=6.3e-11 Score=85.03 Aligned_cols=98 Identities=21% Similarity=0.105 Sum_probs=66.9
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCc--eecCCchhhHHhhhccccccccccCCHHHHHHHHhhC-C
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHA--VNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAY-K 90 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgA--i~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~-~ 90 (144)
...|+++++.+.++. +.+|||+|+..+|..|||||| +|+++... . +. ..+.+++....+.... .
T Consensus 14 ~~~i~~~e~~~~~~~---~~~lIDVR~~~E~~~ghIpgA~~iniP~~~~-~--------~~-~~l~~~~~~~~~~~~~~~ 80 (136)
T PLN02160 14 VVSVDVSQAKTLLQS---GHQYLDVRTQDEFRRGHCEAAKIVNIPYMLN-T--------PQ-GRVKNQEFLEQVSSLLNP 80 (136)
T ss_pred eeEeCHHHHHHHHhC---CCEEEECCCHHHHhcCCCCCcceecccchhc-C--------cc-cccCCHHHHHHHHhccCC
Confidence 457999999999973 347899999999999999999 66665321 0 00 1122222222222222 4
Q ss_pred CCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 91 DSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 91 ~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
+.+||+||.. |. .+......|.+.||+ ++.+.||
T Consensus 81 ~~~IivyC~s------G~-----------RS~~Aa~~L~~~G~~~v~~l~GG 115 (136)
T PLN02160 81 ADDILVGCQS------GA-----------RSLKATTELVAAGYKKVRNKGGG 115 (136)
T ss_pred CCcEEEECCC------cH-----------HHHHHHHHHHHcCCCCeeecCCc
Confidence 6799999987 22 455667788889996 8888887
No 38
>PRK00142 putative rhodanese-related sulfurtransferase; Provisional
Probab=99.23 E-value=8.7e-11 Score=95.04 Aligned_cols=95 Identities=17% Similarity=0.217 Sum_probs=68.7
Q ss_pred CCCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCC
Q psy18174 13 LELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDS 92 (144)
Q Consensus 13 ~~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~ 92 (144)
....|++++|.++++ +++++|||+|+..+|..||||||+|+++..+. . ++ +.........++.
T Consensus 110 ~~~~is~~el~~~l~--~~~~vlIDVR~~~E~~~GhI~GAi~ip~~~~~-~------------~~--~~l~~~~~~~kdk 172 (314)
T PRK00142 110 VGTYLKPKEVNELLD--DPDVVFIDMRNDYEYEIGHFENAIEPDIETFR-E------------FP--PWVEENLDPLKDK 172 (314)
T ss_pred CCcccCHHHHHHHhc--CCCeEEEECCCHHHHhcCcCCCCEeCCHHHhh-h------------hH--HHHHHhcCCCCcC
Confidence 345799999999998 56899999999999999999999999986641 0 00 0000011112577
Q ss_pred EEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 93 LFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 93 ~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
+||+|+.+ |. ........|.+.||+ ++.|+||
T Consensus 173 ~IvvyC~~------G~-----------Rs~~aa~~L~~~Gf~~V~~L~GG 205 (314)
T PRK00142 173 KVVMYCTG------GI-----------RCEKASAWMKHEGFKEVYQLEGG 205 (314)
T ss_pred eEEEECCC------Cc-----------HHHHHHHHHHHcCCCcEEEecch
Confidence 99999977 22 333445567779996 9999998
No 39
>PRK01415 hypothetical protein; Validated
Probab=99.21 E-value=5.8e-11 Score=93.11 Aligned_cols=93 Identities=13% Similarity=0.071 Sum_probs=68.5
Q ss_pred CccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEE
Q psy18174 15 LCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLF 94 (144)
Q Consensus 15 ~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~V 94 (144)
..|+|+++.++++ +++++|||+|+..+|..||||||+|+++..+ +. +| +..........+.+|
T Consensus 112 ~~i~p~e~~~ll~--~~~~vvIDVRn~~E~~~Ghi~gAinip~~~f--~e-----------~~--~~~~~~~~~~k~k~I 174 (247)
T PRK01415 112 EYIEPKDWDEFIT--KQDVIVIDTRNDYEVEVGTFKSAINPNTKTF--KQ-----------FP--AWVQQNQELLKGKKI 174 (247)
T ss_pred cccCHHHHHHHHh--CCCcEEEECCCHHHHhcCCcCCCCCCChHHH--hh-----------hH--HHHhhhhhhcCCCeE
Confidence 4699999999998 5689999999999999999999999987653 10 00 000011111257799
Q ss_pred EEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 95 VVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 95 VvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
|+||.+ |. ........|.+.||+ ++.|+||
T Consensus 175 v~yCtg------Gi-----------Rs~kAa~~L~~~Gf~~Vy~L~GG 205 (247)
T PRK01415 175 AMVCTG------GI-----------RCEKSTSLLKSIGYDEVYHLKGG 205 (247)
T ss_pred EEECCC------Ch-----------HHHHHHHHHHHcCCCcEEEechH
Confidence 999977 22 445566778889997 9999997
No 40
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=99.20 E-value=1e-10 Score=101.87 Aligned_cols=100 Identities=21% Similarity=0.231 Sum_probs=72.9
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcchhc--------cCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHH
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNEYT--------ESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKI 85 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~--------~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l 85 (144)
..+++.+|+.++++ +++++|||+|+.++|. .||||||+|+++..++. . .+.+++++..+.+
T Consensus 146 ~~~v~~e~v~~~l~--~~~~~iIDaR~~~ef~G~~~~~~r~GHIPGAvnip~~~~~~-----~----~~~lk~~~el~~~ 214 (610)
T PRK09629 146 EPTATREYLQSRLG--AADLAIWDARAPTEYSGEKVVAAKGGHIPGAVNFEWTAGMD-----K----ARNLRIRQDMPEI 214 (610)
T ss_pred cccccHHHHHHhhC--CCCcEEEECCCccccCCcccccccCCCCCCCeecCHHHhcC-----C----CCCCCCHHHHHHH
Confidence 34789999999998 5678899999999884 79999999999865431 1 1345666655444
Q ss_pred Hh--hC-CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 86 MN--AY-KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 86 ~~--~~-~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
.. ++ ++++||+||+. |. .+..+...|+..||+ +.++.|+
T Consensus 215 ~~~~Gi~~~~~VVvYC~s------G~-----------rAa~~~~~L~~lG~~~V~~YdGs 257 (610)
T PRK09629 215 LRDLGITPDKEVITHCQT------HH-----------RSGFTYLVAKALGYPRVKAYAGS 257 (610)
T ss_pred HHHcCCCCCCCEEEECCC------Ch-----------HHHHHHHHHHHcCCCCcEEeCCC
Confidence 33 33 57799999977 21 344556677888997 7777776
No 41
>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.
Probab=99.20 E-value=8.8e-11 Score=85.17 Aligned_cols=81 Identities=16% Similarity=0.071 Sum_probs=57.7
Q ss_pred HHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEEEEcCCC
Q psy18174 22 LLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFVVYGDSC 101 (144)
Q Consensus 22 L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VVvYD~~~ 101 (144)
|++++.. +.+++|||+|+..+|..+|||||+|++...+ . ..+...-.+.+||||++.
T Consensus 2 l~~~l~~-~~~~~ivDvR~~~e~~~gHIpgAi~~~~~~l-~--------------------~~l~~l~~~~~vVv~c~~- 58 (145)
T cd01535 2 LAAWLGE-GGQTAVVDVTASANYVKRHIPGAWWVLRAQL-A--------------------QALEKLPAAERYVLTCGS- 58 (145)
T ss_pred hHHHHhC-CCCeEEEECCCHHHHHcCCCCCceeCCHHHH-H--------------------HHHHhcCCCCCEEEEeCC-
Confidence 5566654 4469999999999999999999999864332 1 111111146689999866
Q ss_pred CccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 102 MSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 102 ~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
. ..+..+...|...|+. +++|+||
T Consensus 59 g----------------~~a~~aa~~L~~~G~~~v~~L~GG 83 (145)
T cd01535 59 S----------------LLARFAAADLAALTVKPVFVLEGG 83 (145)
T ss_pred C----------------hHHHHHHHHHHHcCCcCeEEecCc
Confidence 1 1456677788888984 9999998
No 42
>PRK07411 hypothetical protein; Validated
Probab=99.17 E-value=1.2e-10 Score=96.68 Aligned_cols=95 Identities=18% Similarity=0.146 Sum_probs=70.0
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCE
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSL 93 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~ 93 (144)
...|++++|.+.++...++.+|||+|+..+|..+|||||+|+++.++.. .. ..+ .+....++.+
T Consensus 281 ~~~Is~~el~~~l~~~~~~~vlIDVR~~~E~~~ghIpGAiniP~~~l~~-----~~--------~~~---~l~~l~~d~~ 344 (390)
T PRK07411 281 IPEMTVTELKALLDSGADDFVLIDVRNPNEYEIARIPGSVLVPLPDIEN-----GP--------GVE---KVKELLNGHR 344 (390)
T ss_pred cCccCHHHHHHHHhCCCCCeEEEECCCHHHhccCcCCCCEEccHHHhhc-----cc--------chH---HHhhcCCCCe
Confidence 4579999999999842236899999999999999999999999865421 00 001 1212225779
Q ss_pred EEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCceeEEeecc
Q psy18174 94 FVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVVCLLVL 141 (144)
Q Consensus 94 VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~ 141 (144)
||+|+.. |. .+......|++.||+.+.+.||
T Consensus 345 IVvyC~~------G~-----------RS~~aa~~L~~~G~~~~~l~GG 375 (390)
T PRK07411 345 LIAHCKM------GG-----------RSAKALGILKEAGIEGTNVKGG 375 (390)
T ss_pred EEEECCC------CH-----------HHHHHHHHHHHcCCCeEEecch
Confidence 9999977 22 4556678888999998889987
No 43
>PRK11784 tRNA 2-selenouridine synthase; Provisional
Probab=99.16 E-value=1.8e-10 Score=94.35 Aligned_cols=105 Identities=17% Similarity=0.118 Sum_probs=69.5
Q ss_pred CHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhh------ccc---cccccccCCHHHHHHHHh-
Q psy18174 18 SKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLA------AGK---IELLSTIKCRELKEKIMN- 87 (144)
Q Consensus 18 s~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~------~~~---~~~~~~lp~~~~~~~l~~- 87 (144)
..+++.+.+. .+.+|||+|++.+|..||||||+|+++.+...+... .|. ..+.+.+++++..+.+..
T Consensus 4 ~~~~~~~~~~---~~~~lIDVRsp~Ef~~ghIpgAiniPl~~~~er~~vgt~Ykq~g~~~a~~lg~~lv~~~l~~~~~~~ 80 (345)
T PRK11784 4 DAQDFRALFL---NDTPLIDVRSPIEFAEGHIPGAINLPLLNDEERAEVGTCYKQQGQFAAIALGHALVAGNIAAHREEA 80 (345)
T ss_pred cHHHHHHHHh---CCCEEEECCCHHHHhcCCCCCeeeCCCCChhHHHhhchhhcccCHHHHHHhhhhhcchhHHHHHHHH
Confidence 3566776654 368999999999999999999999998653222110 000 113345555444333322
Q ss_pred --h--CCCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCceeEEeecc
Q psy18174 88 --A--YKDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVVCLLVL 141 (144)
Q Consensus 88 --~--~~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~ 141 (144)
. -++.+|||||.+ + |. .+..+...|...|++++.|.||
T Consensus 81 ~~~~~~~~~~ivvyC~r-g----G~-----------RS~~aa~~L~~~G~~v~~L~GG 122 (345)
T PRK11784 81 WADFPRANPRGLLYCWR-G----GL-----------RSGSVQQWLKEAGIDVPRLEGG 122 (345)
T ss_pred HHhcccCCCeEEEEECC-C----Ch-----------HHHHHHHHHHHcCCCcEEEcCC
Confidence 1 147799999965 1 11 4566777888999999999998
No 44
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=99.15 E-value=1.8e-10 Score=95.64 Aligned_cols=91 Identities=20% Similarity=0.180 Sum_probs=68.8
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCE
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSL 93 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~ 93 (144)
...|++++|.++++. +.+++|||+|+..+|..+|||||+|+++..+... + .+...-++++
T Consensus 286 ~~~Is~~el~~~l~~-~~~~~lIDvR~~~ef~~ghIpGAinip~~~l~~~----------------~---~~~~l~~d~~ 345 (392)
T PRK07878 286 GSTITPRELKEWLDS-GKKIALIDVREPVEWDIVHIPGAQLIPKSEILSG----------------E---ALAKLPQDRT 345 (392)
T ss_pred CCccCHHHHHHHHhC-CCCeEEEECCCHHHHhcCCCCCCEEcChHHhcch----------------h---HHhhCCCCCc
Confidence 357999999999974 3468999999999999999999999988654210 0 0111115779
Q ss_pred EEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 94 FVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 94 VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
||+|++. |. .+...+..|.+.||+ ++.|.||
T Consensus 346 iVvyC~~------G~-----------rS~~aa~~L~~~G~~~V~~L~GG 377 (392)
T PRK07878 346 IVLYCKT------GV-----------RSAEALAALKKAGFSDAVHLQGG 377 (392)
T ss_pred EEEEcCC------Ch-----------HHHHHHHHHHHcCCCcEEEecCc
Confidence 9999977 11 455667788899996 8999997
No 45
>PRK05320 rhodanese superfamily protein; Provisional
Probab=99.15 E-value=2.7e-10 Score=89.84 Aligned_cols=96 Identities=16% Similarity=0.087 Sum_probs=68.5
Q ss_pred CCccCHHHHHHHhccC----CCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhC
Q psy18174 14 ELCVSKSWLLQELRSD----PSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAY 89 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~----~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~ 89 (144)
...|+++++.+.++.. +++++|||+|+..+|..||||||+|+++.++. .. + +.........
T Consensus 109 ~~~is~~el~~~l~~~~~~~~~~~vlIDVR~~~E~~~Ghi~GAiniPl~~f~-~~------------~--~~l~~~~~~~ 173 (257)
T PRK05320 109 APSVDAATLKRWLDQGHDDAGRPVVMLDTRNAFEVDVGTFDGALDYRIDKFT-EF------------P--EALAAHRADL 173 (257)
T ss_pred CceeCHHHHHHHHhccccccCCCeEEEECCCHHHHccCccCCCEeCChhHhh-hh------------H--HHHHhhhhhc
Confidence 3579999999988742 13589999999999999999999999986541 00 0 0001111112
Q ss_pred CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 90 KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 90 ~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
++.+||+|+.. |. ........|++.||+ ++.|+||
T Consensus 174 kdk~IvvyC~~------G~-----------Rs~~Aa~~L~~~Gf~~V~~L~GG 209 (257)
T PRK05320 174 AGKTVVSFCTG------GI-----------RCEKAAIHMQEVGIDNVYQLEGG 209 (257)
T ss_pred CCCeEEEECCC------CH-----------HHHHHHHHHHHcCCcceEEeccC
Confidence 57799999977 21 455566778899996 9999997
No 46
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=99.12 E-value=2.9e-10 Score=93.85 Aligned_cols=90 Identities=13% Similarity=0.058 Sum_probs=66.1
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCE
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSL 93 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~ 93 (144)
...|++++|.++++ + +.+|||+|+..+|..+|||||+|+++..+ .... ...++ -++++
T Consensus 2 v~~is~~el~~~l~--~-~~~ivDvR~~~e~~~ghIpgAi~ip~~~l-~~~~-------~~~~~-----------~~~~~ 59 (376)
T PRK08762 2 IREISPAEARARAA--Q-GAVLIDVREAHERASGQAEGALRIPRGFL-ELRI-------ETHLP-----------DRDRE 59 (376)
T ss_pred CceeCHHHHHHHHh--C-CCEEEECCCHHHHhCCcCCCCEECCHHHH-HHHH-------hhhcC-----------CCCCe
Confidence 35699999999997 3 47899999999999999999999987543 1100 00000 14779
Q ss_pred EEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeeccc
Q psy18174 94 FVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVLK 142 (144)
Q Consensus 94 VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~~ 142 (144)
||+||+. |. .+..+.+.|...||+ +++|+||-
T Consensus 60 IvvyC~~------G~-----------rs~~aa~~L~~~G~~~v~~l~GG~ 92 (376)
T PRK08762 60 IVLICAS------GT-----------RSAHAAATLRELGYTRVASVAGGF 92 (376)
T ss_pred EEEEcCC------Cc-----------HHHHHHHHHHHcCCCceEeecCcH
Confidence 9999977 11 344566788899996 89999873
No 47
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=99.07 E-value=5.6e-10 Score=76.79 Aligned_cols=74 Identities=16% Similarity=0.225 Sum_probs=51.0
Q ss_pred CeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEEEEcCCCCccccccccc
Q psy18174 32 RLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFVVYGDSCMSEVEVRDRE 111 (144)
Q Consensus 32 ~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VVvYD~~~~~~~~g~~~~ 111 (144)
.-.|||+|+..+|..+|||||+|+++.++. ... +.+. ...+.+||+|++. |.
T Consensus 20 ~~~lIDvR~~~ef~~ghIpGAiniP~~~l~-~~l-----------------~~l~-~~~~~~IVlyC~~------G~--- 71 (104)
T PRK10287 20 AEHWIDVRVPEQYQQEHVQGAINIPLKEVK-ERI-----------------ATAV-PDKNDTVKLYCNA------GR--- 71 (104)
T ss_pred CCEEEECCCHHHHhcCCCCccEECCHHHHH-HHH-----------------HhcC-CCCCCeEEEEeCC------Ch---
Confidence 446999999999999999999999876531 110 0110 1135689999977 11
Q ss_pred cccCCCccHHHHHHHHHHhcCceeEEeecc
Q psy18174 112 KHCYTASDTMNVLTKRLQQDGCQVVCLLVL 141 (144)
Q Consensus 112 ~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~ 141 (144)
.+...+..|.+.||+.++..||
T Consensus 72 --------rS~~aa~~L~~~G~~~v~~~GG 93 (104)
T PRK10287 72 --------QSGQAKEILSEMGYTHAENAGG 93 (104)
T ss_pred --------HHHHHHHHHHHcCCCeEEecCC
Confidence 4556677888899984444676
No 48
>KOG1530|consensus
Probab=99.06 E-value=8.4e-10 Score=78.28 Aligned_cols=93 Identities=20% Similarity=0.194 Sum_probs=68.7
Q ss_pred CCCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhC--C
Q psy18174 13 LELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAY--K 90 (144)
Q Consensus 13 ~~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~--~ 90 (144)
.+..++.++.+.+++ .++.++||+|.+++|..+|||.+|||++... +....+++++....+.... .
T Consensus 21 ~~~sv~~~qvk~L~~--~~~~~llDVRepeEfk~gh~~~siNiPy~~~----------~~~~~l~~~eF~kqvg~~kp~~ 88 (136)
T KOG1530|consen 21 NPQSVSVEQVKNLLQ--HPDVVLLDVREPEEFKQGHIPASINIPYMSR----------PGAGALKNPEFLKQVGSSKPPH 88 (136)
T ss_pred CcEEEEHHHHHHHhc--CCCEEEEeecCHHHhhccCCcceEecccccc----------ccccccCCHHHHHHhcccCCCC
Confidence 456799999999998 5569999999999999999999999998431 2334556666555554422 4
Q ss_pred CCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce
Q psy18174 91 DSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ 134 (144)
Q Consensus 91 ~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~ 134 (144)
++.||+||+. |. ......+.|...||+
T Consensus 89 d~eiIf~C~S------G~-----------Rs~~A~~~l~s~Gyk 115 (136)
T KOG1530|consen 89 DKEIIFGCAS------GV-----------RSLKATKILVSAGYK 115 (136)
T ss_pred CCcEEEEecc------Cc-----------chhHHHHHHHHcCcc
Confidence 6699999987 22 334455677788887
No 49
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=99.06 E-value=7.3e-10 Score=75.81 Aligned_cols=75 Identities=17% Similarity=0.195 Sum_probs=51.8
Q ss_pred CCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEEEEcCCCCcccccccc
Q psy18174 31 SRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFVVYGDSCMSEVEVRDR 110 (144)
Q Consensus 31 ~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VVvYD~~~~~~~~g~~~ 110 (144)
..-.+||+|+..+|..+|||||+|+++.++. .+. ..+ ....+.+||+||.. |.
T Consensus 17 ~~~~lIDvR~~~ef~~ghIpgAinip~~~l~-~~l-----------------~~~-~~~~~~~vvlyC~~------G~-- 69 (101)
T TIGR02981 17 AAEHWIDVRIPEQYQQEHIQGAINIPLKEIK-EHI-----------------ATA-VPDKNDTVKLYCNA------GR-- 69 (101)
T ss_pred cCCEEEECCCHHHHhcCCCCCCEECCHHHHH-HHH-----------------HHh-CCCCCCeEEEEeCC------CH--
Confidence 3566999999999999999999999986531 111 000 01146689999977 21
Q ss_pred ccccCCCccHHHHHHHHHHhcCceeEEeecc
Q psy18174 111 EKHCYTASDTMNVLTKRLQQDGCQVVCLLVL 141 (144)
Q Consensus 111 ~~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~ 141 (144)
.+......|.+.||+.+...||
T Consensus 70 ---------rS~~aa~~L~~~G~~~v~~~GG 91 (101)
T TIGR02981 70 ---------QSGMAKDILLDMGYTHAENAGG 91 (101)
T ss_pred ---------HHHHHHHHHHHcCCCeEEecCC
Confidence 4556677888999984444465
No 50
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=98.99 E-value=2.5e-09 Score=85.01 Aligned_cols=97 Identities=16% Similarity=0.104 Sum_probs=66.2
Q ss_pred ccCHHHHHHHhccCCCCeEEEeecCcchhc-----------cCCCcCceecCCchhhHHhhhccccccccccCCHHHH-H
Q psy18174 16 CVSKSWLLQELRSDPSRLIILDCRSSNEYT-----------ESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELK-E 83 (144)
Q Consensus 16 ~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~-----------~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~-~ 83 (144)
+++.+++.+.++ +.+.+|||+|+..+|. .||||||+|+++..++. ...+.+++.. +
T Consensus 154 ~~~~~~v~~~~~--~~~~~llD~R~~~e~~G~~~~~~~~~~~GhIpgA~~i~~~~~~~----------~~~~~~~~~l~~ 221 (281)
T PRK11493 154 VVRLTDVLLASH--EKTAQIVDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR----------EGELKTTDELDA 221 (281)
T ss_pred eecHHHHHHhhc--CCCcEEEeCCCccceeeeccCCCCCcccccCCCcCCCCHHHhcC----------CCCcCCHHHHHH
Confidence 556666666666 4567899999998885 69999999999866421 1134444443 3
Q ss_pred HHHh-hC-CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 84 KIMN-AY-KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 84 ~l~~-~~-~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
.+.. ++ ++++||+||+. |. .+..+...|...|++ +.++.|+
T Consensus 222 ~~~~~g~~~~~~ii~yC~~------G~-----------~A~~~~~~l~~~G~~~v~~y~Gs 265 (281)
T PRK11493 222 IFFGRGVSFDRPIIASCGS------GV-----------TAAVVVLALATLDVPNVKLYDGA 265 (281)
T ss_pred HHHhcCCCCCCCEEEECCc------HH-----------HHHHHHHHHHHcCCCCceeeCCC
Confidence 3433 34 46799999977 22 455566677788996 7787776
No 51
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=98.96 E-value=2.5e-09 Score=88.37 Aligned_cols=93 Identities=13% Similarity=0.124 Sum_probs=67.0
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCc---CceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCC
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIR---HAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYK 90 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIp---gAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~ 90 (144)
...|++++|.++++ +.+.+|||+|+..+|..+||| ||+|+++..+.. .. +....+ ...+
T Consensus 270 ~~~~~~~el~~~l~--~~~~~lIDVR~~~E~~~ghI~~~~gAinIPl~~l~~-~~--------------~~~~~l-~~~~ 331 (370)
T PRK05600 270 AARTDTTSLIDATL--NGSATLLDVREPHEVLLKDLPEGGASLKLPLSAITD-DA--------------DILHAL-SPID 331 (370)
T ss_pred hcccCHHHHHHHHh--cCCeEEEECCCHHHhhhccCCCCCccEeCcHHHhhc-ch--------------hhhhhc-cccC
Confidence 34789999999998 446789999999999999998 599998765410 00 000111 1113
Q ss_pred CCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce--eEEeecc
Q psy18174 91 DSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ--VVCLLVL 141 (144)
Q Consensus 91 ~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~--~~~l~G~ 141 (144)
+++||||+.. |. .+....+.|++.||+ ++.|+||
T Consensus 332 ~~~Ivv~C~s------G~-----------RS~~Aa~~L~~~G~~~~v~~l~GG 367 (370)
T PRK05600 332 GDNVVVYCAS------GI-----------RSADFIEKYSHLGHELTLHNLPGG 367 (370)
T ss_pred CCcEEEECCC------Ch-----------hHHHHHHHHHHcCCCCceEEeccc
Confidence 4489999987 22 455667889999997 6999998
No 52
>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase. The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.
Probab=98.96 E-value=1.5e-09 Score=87.76 Aligned_cols=93 Identities=20% Similarity=0.125 Sum_probs=56.7
Q ss_pred CeEEEeecCcchhccCCCcCceecCCchhhHHhhhccc-------c---ccccccCCHHHHHHHH---hhC-CCCEEEEE
Q psy18174 32 RLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGK-------I---ELLSTIKCRELKEKIM---NAY-KDSLFVVY 97 (144)
Q Consensus 32 ~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~-------~---~~~~~lp~~~~~~~l~---~~~-~~~~VVvY 97 (144)
..+|||+|++.+|..||||||+|+++.+.- .|..-|. . .+-+-+.+....+.+. ... .+..||||
T Consensus 2 ~~~liDVRsp~Ef~~ghipgAiniPl~~~~-er~~vgt~ykq~g~~~A~~lg~~~v~~~l~~~i~~~~~~~~~~~~vvvy 80 (311)
T TIGR03167 2 FDPLIDVRSPAEFAEGHLPGAINLPLLNDE-ERAEVGTLYKQVGPFAAIKLGLALVSPNLAAHVEQWRAFADGPPQPLLY 80 (311)
T ss_pred CCEEEECCCHHHHhcCCCcCCEecccccch-hhhhhhhhhhcccHHHHHHHhHhhhhHHHHHHHHHHHhhcCCCCcEEEE
Confidence 457999999999999999999999985421 1111010 0 0001111111111222 222 24469999
Q ss_pred cCCCCccccccccccccCCCccHHHHHHHHHHhcCceeEEeecc
Q psy18174 98 GDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVVCLLVL 141 (144)
Q Consensus 98 D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~ 141 (144)
|.. + | ..+..+...|...|++++.|.||
T Consensus 81 C~~-g----G-----------~RS~~aa~~L~~~G~~v~~L~GG 108 (311)
T TIGR03167 81 CWR-G----G-----------MRSGSLAWLLAQIGFRVPRLEGG 108 (311)
T ss_pred ECC-C----C-----------hHHHHHHHHHHHcCCCEEEecCh
Confidence 964 1 1 15667778889999999999987
No 53
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=98.93 E-value=3.2e-09 Score=87.20 Aligned_cols=87 Identities=15% Similarity=0.097 Sum_probs=63.3
Q ss_pred CccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEE
Q psy18174 15 LCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLF 94 (144)
Q Consensus 15 ~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~V 94 (144)
..++++++.+... +.+|||+|+..+|..+|||||+|+++..+.. .. . ...+ .++++|
T Consensus 261 ~~i~~~~~~~~~~----~~~IIDVR~~~ef~~ghIpgAinip~~~l~~-~~----~--~~~~------------~~~~~I 317 (355)
T PRK05597 261 EVLDVPRVSALPD----GVTLIDVREPSEFAAYSIPGAHNVPLSAIRE-GA----N--PPSV------------SAGDEV 317 (355)
T ss_pred cccCHHHHHhccC----CCEEEECCCHHHHccCcCCCCEEeCHHHhhh-cc----c--cccC------------CCCCeE
Confidence 3678888884433 5789999999999999999999999866421 00 0 0001 147799
Q ss_pred EEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 95 VVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 95 VvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
|+|++. |. .+...+..|.+.||+ +++|+||
T Consensus 318 vvyC~~------G~-----------rS~~Aa~~L~~~G~~nV~~L~GG 348 (355)
T PRK05597 318 VVYCAA------GV-----------RSAQAVAILERAGYTGMSSLDGG 348 (355)
T ss_pred EEEcCC------CH-----------HHHHHHHHHHHcCCCCEEEecCc
Confidence 999977 11 455667888899997 8899997
No 54
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=98.89 E-value=9.1e-09 Score=82.24 Aligned_cols=76 Identities=20% Similarity=0.300 Sum_probs=60.6
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcchhcc----------CCCcCceecCCchhhHHhhhccccccccccCCHHHHH
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNEYTE----------SHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKE 83 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~----------~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~ 83 (144)
...++.+.++..++ ....+|||+|+.++|.. ||||||+|+++..++. --.++..++..+
T Consensus 155 ~~~~~~~~~~~~~~--~~~~~liDaR~~~rf~G~~~ep~~~~~GHIPGAiNipw~~~~~---------~~~~~~~~~~~~ 223 (285)
T COG2897 155 KAVVDATLVADALE--VPAVLLIDARSPERFRGKEPEPRDGKAGHIPGAINIPWTDLVD---------DGGLFKSPEEIA 223 (285)
T ss_pred cccCCHHHHHHHhc--CCCeEEEecCCHHHhCCCCCCCCCCCCCCCCCCcCcCHHHHhc---------CCCccCcHHHHH
Confidence 45788888888888 66888999999999998 9999999999987642 124677777777
Q ss_pred HHHh--hC-CCCEEEEEcCC
Q psy18174 84 KIMN--AY-KDSLFVVYGDS 100 (144)
Q Consensus 84 ~l~~--~~-~~~~VVvYD~~ 100 (144)
.|.. ++ .++.||+||..
T Consensus 224 ~l~~~~gi~~~~~vI~yCgs 243 (285)
T COG2897 224 RLYADAGIDPDKEVIVYCGS 243 (285)
T ss_pred HHHHhcCCCCCCCEEEEcCC
Confidence 7653 44 58899999977
No 55
>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=98.85 E-value=1.2e-08 Score=69.05 Aligned_cols=76 Identities=25% Similarity=0.261 Sum_probs=56.2
Q ss_pred CCCeEEEeecCcchhccCCCcC-ceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEEEEcCCCCcccccc
Q psy18174 30 PSRLIILDCRSSNEYTESHIRH-AVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFVVYGDSCMSEVEVR 108 (144)
Q Consensus 30 ~~~~~IlD~R~~~~y~~~HIpg-Ai~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VVvYD~~~~~~~~g~ 108 (144)
.++.+|||+|...+|..+|||| |+|+++.++.. +. .. .. + -.+.+|||||.. |.
T Consensus 18 ~~~~~liDvR~~~e~~~~~i~~~~~~ip~~~~~~-~~--~~--~~--~------------~~~~~ivv~C~~------G~ 72 (110)
T COG0607 18 GEDAVLLDVREPEEYERGHIPGAAINIPLSELKA-AE--NL--LE--L------------PDDDPIVVYCAS------GV 72 (110)
T ss_pred cCCCEEEeccChhHhhhcCCCcceeeeecccchh-hh--cc--cc--c------------CCCCeEEEEeCC------CC
Confidence 5689999999999999999999 99999876521 10 00 00 1 147799999987 22
Q ss_pred ccccccCCCccHHHHHHHHHHhcCceeE-Eeecc
Q psy18174 109 DREKHCYTASDTMNVLTKRLQQDGCQVV-CLLVL 141 (144)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~L~~~g~~~~-~l~G~ 141 (144)
......+.|...||... .+.||
T Consensus 73 -----------rS~~aa~~L~~~G~~~~~~l~gG 95 (110)
T COG0607 73 -----------RSAAAAAALKLAGFTNVYNLDGG 95 (110)
T ss_pred -----------ChHHHHHHHHHcCCccccccCCc
Confidence 45677788999999865 77776
No 56
>KOG3772|consensus
Probab=98.46 E-value=2.4e-07 Score=74.83 Aligned_cols=48 Identities=31% Similarity=0.434 Sum_probs=39.4
Q ss_pred CCCccCHHHHHHHhccC--C--CCeEEEeecCcchhccCCCcCceecCCchh
Q psy18174 13 LELCVSKSWLLQELRSD--P--SRLIILDCRSSNEYTESHIRHAVNFSIPSI 60 (144)
Q Consensus 13 ~~~~Is~~~L~~~l~~~--~--~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~ 60 (144)
....||++.|+.+|+.. . ...+|||||.+-+|..|||+||+|+.-...
T Consensus 154 ~~k~Is~etl~~ll~~~~~~~~~~~~iiDcR~pyEY~GGHIkgavnl~~~~~ 205 (325)
T KOG3772|consen 154 DLKYISPETLKGLLQGKFSDFFDKFIIIDCRYPYEYEGGHIKGAVNLYSKEL 205 (325)
T ss_pred cccccCHHHHHHHHHhccccceeeEEEEEeCCcccccCcccccceecccHhh
Confidence 35579999999999851 1 236799999999999999999999976543
No 57
>COG1054 Predicted sulfurtransferase [General function prediction only]
Probab=98.19 E-value=3.6e-06 Score=67.35 Aligned_cols=93 Identities=20% Similarity=0.217 Sum_probs=66.3
Q ss_pred CccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEE
Q psy18174 15 LCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLF 94 (144)
Q Consensus 15 ~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~V 94 (144)
.-|+|.+..++|. ++++++||+|+.-+|.-||-.||++.++.++ |. +| +-.........+.+|
T Consensus 113 ~yl~p~~wn~~l~--D~~~vviDtRN~YE~~iG~F~gAv~p~~~tF--re-----------fP--~~v~~~~~~~~~KkV 175 (308)
T COG1054 113 TYLSPKDWNELLS--DPDVVVIDTRNDYEVAIGHFEGAVEPDIETF--RE-----------FP--AWVEENLDLLKDKKV 175 (308)
T ss_pred CccCHHHHHHHhc--CCCeEEEEcCcceeEeeeeecCccCCChhhh--hh-----------hH--HHHHHHHHhccCCcE
Confidence 4689999999999 6789999999999999999999999998765 11 11 111112223357799
Q ss_pred EEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 95 VVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 95 VvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
|.|+.+ .+ . + . ....-|...||+ ||.|+||
T Consensus 176 vmyCTG-GI----R---C----E-----Kas~~m~~~GF~eVyhL~GG 206 (308)
T COG1054 176 VMYCTG-GI----R---C----E-----KASAWMKENGFKEVYHLEGG 206 (308)
T ss_pred EEEcCC-ce----e---e----h-----hhHHHHHHhcchhhhcccch
Confidence 999977 21 1 1 1 122245678998 9999998
No 58
>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional
Probab=98.18 E-value=5.8e-06 Score=70.54 Aligned_cols=66 Identities=14% Similarity=0.239 Sum_probs=49.2
Q ss_pred CCeEEEeecCcchhccCCCcC----ceecCCchhhHHhhhccccccccccCCHHHHHHHHhhCCCCEEEEEcCCCCcccc
Q psy18174 31 SRLIILDCRSSNEYTESHIRH----AVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNAYKDSLFVVYGDSCMSEVE 106 (144)
Q Consensus 31 ~~~~IlD~R~~~~y~~~HIpg----Ai~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~~~~~~VVvYD~~~~~~~~ 106 (144)
++.+|||+|+..+|..+|||| |+|+++..+.. . +...-.+.+||+||..
T Consensus 406 ~~~~lIDVR~~~E~~~~hI~g~~~~a~niP~~~l~~-~--------------------~~~l~~~~~iivyC~~------ 458 (482)
T PRK01269 406 PDDVIIDIRSPDEQEDKPLKLEGVEVKSLPFYKLST-Q--------------------FGDLDQSKTYLLYCDR------ 458 (482)
T ss_pred CCCEEEECCCHHHHhcCCCCCCCceEEECCHHHHHH-H--------------------HhhcCCCCeEEEECCC------
Confidence 467899999999999999999 99998766421 0 1011146699999987
Q ss_pred ccccccccCCCccHHHHHHHHHHhcCce
Q psy18174 107 VRDREKHCYTASDTMNVLTKRLQQDGCQ 134 (144)
Q Consensus 107 g~~~~~~~~~~~~~~~~~~~~L~~~g~~ 134 (144)
|. .+...+..|.+.||+
T Consensus 459 G~-----------rS~~aa~~L~~~G~~ 475 (482)
T PRK01269 459 GV-----------MSRLQALYLREQGFS 475 (482)
T ss_pred CH-----------HHHHHHHHHHHcCCc
Confidence 22 456667788889997
No 59
>KOG2017|consensus
Probab=97.32 E-value=0.00064 Score=55.89 Aligned_cols=44 Identities=30% Similarity=0.391 Sum_probs=39.9
Q ss_pred ccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCchh
Q psy18174 16 CVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIPSI 60 (144)
Q Consensus 16 ~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~ 60 (144)
-||..+.+.++++ .+..++||+|+..+|+-.|+|+|+||++.+.
T Consensus 318 Rvsv~d~k~il~~-~~~h~llDvRp~~~~eI~~lP~avNIPL~~l 361 (427)
T KOG2017|consen 318 RVSVTDYKRILDS-GAKHLLLDVRPSHEYEICRLPEAVNIPLKEL 361 (427)
T ss_pred cccHHHHHHHHhc-CCCeEEEeccCcceEEEEecccccccchhhh
Confidence 5899999999985 4789999999999999999999999998775
No 60
>COG5105 MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning]
Probab=97.09 E-value=0.00046 Score=56.13 Aligned_cols=47 Identities=36% Similarity=0.376 Sum_probs=39.3
Q ss_pred cCCCccCHHHHHHHhccC-C---CCeEEEeecCcchhccCCCcCceecCCc
Q psy18174 12 TLELCVSKSWLLQELRSD-P---SRLIILDCRSSNEYTESHIRHAVNFSIP 58 (144)
Q Consensus 12 ~~~~~Is~~~L~~~l~~~-~---~~~~IlD~R~~~~y~~~HIpgAi~~~~~ 58 (144)
+..+-|+++.|+..|+.- . .+++|||||..=+|..|||-+|+|+.-.
T Consensus 239 Ds~~RIs~etlk~vl~g~~~~~f~kCiIIDCRFeYEY~GGHIinaVNi~s~ 289 (427)
T COG5105 239 DSIQRISVETLKQVLEGMYNIDFLKCIIIDCRFEYEYRGGHIINAVNISST 289 (427)
T ss_pred cchhhcCHHHHHHHHhchhhhhhhceeEEeecceeeecCceeeeeeecchH
Confidence 456679999999999831 1 3689999999999999999999999754
No 61
>KOG3636|consensus
Probab=96.39 E-value=0.0031 Score=53.53 Aligned_cols=110 Identities=17% Similarity=0.202 Sum_probs=64.2
Q ss_pred ccCHHHHHHHhccC--CCCeEEEeecCcchhccCCCcCceecCCchhhHHhhhccccccccccCCHHHHHHHHhh--CCC
Q psy18174 16 CVSKSWLLQELRSD--PSRLIILDCRSSNEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCRELKEKIMNA--YKD 91 (144)
Q Consensus 16 ~Is~~~L~~~l~~~--~~~~~IlD~R~~~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~~~~l~~~--~~~ 91 (144)
-|+.-+|.++-+.. +-+..|+|||+.++|++||+-.|.|+++.-++ ..+..-...+...+. .+++...++ .+.
T Consensus 308 pisv~el~~~~~~~~~~VrFFiVDcRpaeqynaGHlstaFhlDc~lml-qeP~~Fa~av~sLl~--aqrqtie~~s~agg 384 (669)
T KOG3636|consen 308 PISVIELTSHDEISSGSVRFFIVDCRPAEQYNAGHLSTAFHLDCVLML-QEPEKFAIAVNSLLC--AQRQTIERDSNAGG 384 (669)
T ss_pred chhHHHhhcccccccCceEEEEEeccchhhcccccchhhhcccHHHHh-cCHHHHHHHHHHHHH--HHHHhhhccccCCc
Confidence 47777776554322 33567999999999999999999999986542 221100011111111 122233222 245
Q ss_pred CEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-eEEeecc
Q psy18174 92 SLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 92 ~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
.|..+-..+ . ...+..+.-++..|.+.+.. |-++.||
T Consensus 385 eHlcfmGsG-------r------~EED~YmnMviA~FlQKnk~yVS~~~GG 422 (669)
T KOG3636|consen 385 EHLCFMGSG-------R------DEEDNYMNMVIAMFLQKNKLYVSFVQGG 422 (669)
T ss_pred ceEEEeccC-------c------chHHHHHHHHHHHHHhcCceEEEEecch
Confidence 566665433 1 13456787777777766666 8888887
No 62
>KOG1529|consensus
Probab=94.87 E-value=0.12 Score=41.45 Aligned_cols=62 Identities=24% Similarity=0.232 Sum_probs=39.4
Q ss_pred CCCeEEEeecCc-----------chhccCCCcCceecCCchhhHHhhhccccccccccCCHHH-HHHHHh-hC-CCCEEE
Q psy18174 30 PSRLIILDCRSS-----------NEYTESHIRHAVNFSIPSIMLRRLAAGKIELLSTIKCREL-KEKIMN-AY-KDSLFV 95 (144)
Q Consensus 30 ~~~~~IlD~R~~-----------~~y~~~HIpgAi~~~~~~~l~~r~~~~~~~~~~~lp~~~~-~~~l~~-~~-~~~~VV 95 (144)
..+.-.||+|.. ..+..||||||+||++.+++.. ...+..++. ...+.. ++ .+++||
T Consensus 170 ~~~~~~~DaRs~grF~Gt~p~~~~~~~ggHIpGa~n~P~~~~~~~---------~g~~k~~edl~~~f~~~~l~~~~p~~ 240 (286)
T KOG1529|consen 170 TKNFQYLDARSKGRFDGTEPEPRSGATGGHIPGAINFPFDEVLDP---------DGFIKPAEDLKHLFAQKGLKLSKPVI 240 (286)
T ss_pred cccceeeeccccccccccCCCCcccCcCccCCCcccCChHHhccc---------ccccCCHHHHHHHHHhcCcccCCCEE
Confidence 356889999964 4567799999999999887531 122232333 344433 33 356777
Q ss_pred EEcCC
Q psy18174 96 VYGDS 100 (144)
Q Consensus 96 vYD~~ 100 (144)
+-|..
T Consensus 241 ~sC~~ 245 (286)
T KOG1529|consen 241 VSCGT 245 (286)
T ss_pred Eeecc
Confidence 76654
No 63
>PRK00142 putative rhodanese-related sulfurtransferase; Provisional
Probab=89.60 E-value=0.069 Score=43.42 Aligned_cols=42 Identities=14% Similarity=-0.043 Sum_probs=35.4
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCc
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIP 58 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~ 58 (144)
.++=++++|.+.+.. .+.++|+|....|..+||||+++++..
T Consensus 13 ~~i~~~~~~~~~l~~---~~~~~d~rg~i~~a~egIngtis~~~~ 54 (314)
T PRK00142 13 TPIEDPEAFRDEHLA---LCKSLGLKGRILVAEEGINGTVSGTIE 54 (314)
T ss_pred ccCCCHHHHHHHHHH---HHHHcCCeeEEEEcCCCceEEEEecHH
Confidence 346678889888873 467899999999999999999999874
No 64
>COG2603 Predicted ATPase [General function prediction only]
Probab=80.26 E-value=1.1 Score=36.39 Aligned_cols=28 Identities=18% Similarity=0.370 Sum_probs=24.9
Q ss_pred CeEEEeecCcchhccCCCcCceecCCch
Q psy18174 32 RLIILDCRSSNEYTESHIRHAVNFSIPS 59 (144)
Q Consensus 32 ~~~IlD~R~~~~y~~~HIpgAi~~~~~~ 59 (144)
...+||+|++.+|..||-|+|+|+..-+
T Consensus 15 ~~~lid~rap~ef~~g~~~ia~nl~~~n 42 (334)
T COG2603 15 DTPLIDVRAPIEFENGAMPIAINLPLMN 42 (334)
T ss_pred CCceeeccchHHHhcccchhhhcccccc
Confidence 5679999999999999999999997643
No 65
>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase. The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.
Probab=75.69 E-value=3.1 Score=33.87 Aligned_cols=35 Identities=17% Similarity=0.107 Sum_probs=30.5
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcchhcc---CCCc
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNEYTE---SHIR 50 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~---~HIp 50 (144)
...+..++|.+.+. +.+..|||+|+...|.. ||||
T Consensus 135 ~tg~gKt~Ll~~L~--~~~~~VvDlr~~a~hrGs~fG~~~ 172 (311)
T TIGR03167 135 MTGSGKTELLHALA--NAGAQVLDLEGLANHRGSSFGALG 172 (311)
T ss_pred CCCcCHHHHHHHHh--cCCCeEEECCchHHhcCcccCCCC
Confidence 56788999999998 45688999999999998 8998
No 66
>KOG0333|consensus
Probab=60.30 E-value=22 Score=31.51 Aligned_cols=52 Identities=19% Similarity=0.294 Sum_probs=36.3
Q ss_pred cccCCHHHHHHHHhhC---CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCceeEEeeccc
Q psy18174 74 STIKCRELKEKIMNAY---KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVVCLLVLK 142 (144)
Q Consensus 74 ~~lp~~~~~~~l~~~~---~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~~ 142 (144)
.+++.++.+.+|...+ .+.++||+=+. . -....+++.|.+.||+++.|-|+|
T Consensus 497 ~m~~ed~k~kkL~eil~~~~~ppiIIFvN~-k----------------k~~d~lAk~LeK~g~~~~tlHg~k 551 (673)
T KOG0333|consen 497 EMVSEDEKRKKLIEILESNFDPPIIIFVNT-K----------------KGADALAKILEKAGYKVTTLHGGK 551 (673)
T ss_pred EEecchHHHHHHHHHHHhCCCCCEEEEEec-h----------------hhHHHHHHHHhhccceEEEeeCCc
Confidence 3555566555554422 35677777544 1 266789999999999999999987
No 67
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=52.87 E-value=11 Score=30.91 Aligned_cols=36 Identities=11% Similarity=-0.045 Sum_probs=28.9
Q ss_pred CccCHHHHHHHhccC----CCCeEEEeecCcchhccCCCcC
Q psy18174 15 LCVSKSWLLQELRSD----PSRLIILDCRSSNEYTESHIRH 51 (144)
Q Consensus 15 ~~Is~~~L~~~l~~~----~~~~~IlD~R~~~~y~~~HIpg 51 (144)
..|+++++.++++.. ..+.++||+|... |+..|+|+
T Consensus 277 ~~i~~~~~~~~l~~~~~~~~~~~~ll~vr~~~-~~~~~~~~ 316 (339)
T PRK07688 277 EEYDLEELAELLRDRGLDVNVNPYLLSFSLEE-KRLVLFKD 316 (339)
T ss_pred CccCHHHHHHHHHhcccccCCCcEEEEEecCC-eEEEEEcC
Confidence 468999999998521 3578999999988 99888884
No 68
>KOG1093|consensus
Probab=52.57 E-value=2.2 Score=37.72 Aligned_cols=40 Identities=23% Similarity=0.324 Sum_probs=33.3
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcchhccCCCcCceecCCc
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNEYTESHIRHAVNFSIP 58 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~y~~~HIpgAi~~~~~ 58 (144)
.+-||++++..+ ..+.++|.|...+|..+|+++++|+++.
T Consensus 621 ~prmsAedl~~~-----~~l~v~d~r~~~ef~r~~~s~s~nip~~ 660 (725)
T KOG1093|consen 621 CPRISAEDLIWL-----KMLYVLDTRQESEFQREHFSDSINIPFN 660 (725)
T ss_pred CccccHHHHHHH-----HHHHHHhHHHHHHHHHhhccccccCCcc
Confidence 445777777655 2578999999999999999999999886
No 69
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=49.97 E-value=86 Score=21.88 Aligned_cols=28 Identities=14% Similarity=0.080 Sum_probs=20.5
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcch
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNE 43 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~ 43 (144)
...++++++..+-+ ..=-.|||.|+..+
T Consensus 12 s~qlt~~d~~~L~~--~GiktVIdlR~~~E 39 (135)
T TIGR01244 12 SPQLTKADAAQAAQ--LGFKTVINNRPDRE 39 (135)
T ss_pred cCCCCHHHHHHHHH--CCCcEEEECCCCCC
Confidence 46789999987655 33456999998755
No 70
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=38.85 E-value=1.7e+02 Score=21.96 Aligned_cols=22 Identities=14% Similarity=0.184 Sum_probs=14.7
Q ss_pred HHHHHHHHHHhcCce-eEEeecc
Q psy18174 120 TMNVLTKRLQQDGCQ-VVCLLVL 141 (144)
Q Consensus 120 ~~~~~~~~L~~~g~~-~~~l~G~ 141 (144)
.+....++|+++|.+ ++++.|.
T Consensus 123 ~~r~~v~~l~~~g~~nl~~l~g~ 145 (178)
T PF14606_consen 123 ALREAVEQLRKEGDKNLYYLDGE 145 (178)
T ss_dssp HHHHHHHHHHHTT-TTEEEE-HH
T ss_pred HHHHHHHHHHHcCCCcEEEeCch
Confidence 345667778888987 8888774
No 71
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=37.76 E-value=39 Score=25.80 Aligned_cols=22 Identities=27% Similarity=0.197 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhcCceeEEeecc
Q psy18174 120 TMNVLTKRLQQDGCQVVCLLVL 141 (144)
Q Consensus 120 ~~~~~~~~L~~~g~~~~~l~G~ 141 (144)
.+.++.++|.+.|+.+|+|.|-
T Consensus 39 iA~ale~~L~~~G~~~y~LDGD 60 (197)
T COG0529 39 IANALEEKLFAKGYHVYLLDGD 60 (197)
T ss_pred HHHHHHHHHHHcCCeEEEecCh
Confidence 4478999999999999999984
No 72
>cd01786 STE50_RA Ubiquitin-like domain of STE50_RA. STE50_RA The fungal adaptor protein STE50 is an essential component of three MAPK-mediated signalling pathways, which control the mating response, invasive/filamentous growth and osmotolerance (HOG pathway), respectively. STE50 functions in cell signalling between the activated G protein and STE11. The domain architecture of STE50 includes an amino-terminal SAM (sterile alpha motif) domain in addition to the carboxy-terminal ubiquitin-like RA (RAS-associated) domain. While the SAM domain interacts with STE11, the RA domain interacts with CDC42 and RAS. Modulation of signal transduction by STE50 specifically affects the pheromone-response pathway in yeast.
Probab=34.58 E-value=79 Score=21.34 Aligned_cols=38 Identities=21% Similarity=0.396 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCceeEEe
Q psy18174 90 KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVVCL 138 (144)
Q Consensus 90 ~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~l 138 (144)
...-+|+|++. .+++.-+--=..+.+.|++.|.+..++
T Consensus 57 ~Y~L~I~Ygdq-----------ER~L~ldEKPl~lFk~L~~~g~~P~fM 94 (98)
T cd01786 57 QYVLVICYGDQ-----------ERILDLDEKPVIIFKNLKQQGLHPAIM 94 (98)
T ss_pred heEEEEEeCCe-----------eeeccccccHHHHHHHHHHcCCCCeeE
Confidence 34578999876 222332333357788999999985443
No 73
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=31.64 E-value=2.1e+02 Score=21.04 Aligned_cols=42 Identities=21% Similarity=0.234 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCceeEEeecccc
Q psy18174 90 KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVVCLLVLKY 143 (144)
Q Consensus 90 ~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~~~ 143 (144)
+++.||+-|-. |-. +....+...+..++..|.++.++-||-+
T Consensus 66 ~~~~vi~Ld~~------Gk~------~sSe~fA~~l~~~~~~G~~i~f~IGG~~ 107 (155)
T COG1576 66 KGSYVVLLDIR------GKA------LSSEEFADFLERLRDDGRDISFLIGGAD 107 (155)
T ss_pred CCCeEEEEecC------CCc------CChHHHHHHHHHHHhcCCeEEEEEeCcc
Confidence 46799999977 222 2233677888888889977999999854
No 74
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=28.14 E-value=94 Score=20.57 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=25.4
Q ss_pred CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCceeE
Q psy18174 90 KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVV 136 (144)
Q Consensus 90 ~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~ 136 (144)
.+.+|++.||- .....++..+.+.|++.|.+..
T Consensus 87 ~gk~vliVDDv--------------i~tG~Tl~~~~~~L~~~g~~~v 119 (125)
T PF00156_consen 87 KGKRVLIVDDV--------------IDTGGTLKEAIELLKEAGAKVV 119 (125)
T ss_dssp TTSEEEEEEEE--------------ESSSHHHHHHHHHHHHTTBSEE
T ss_pred cceeEEEEeee--------------EcccHHHHHHHHHHHhCCCcEE
Confidence 57799999987 2234588999999999998743
No 75
>COG1236 YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]
Probab=28.00 E-value=22 Score=30.13 Aligned_cols=18 Identities=17% Similarity=0.239 Sum_probs=15.3
Q ss_pred cchhccCCCcCceecCCc
Q psy18174 41 SNEYTESHIRHAVNFSIP 58 (144)
Q Consensus 41 ~~~y~~~HIpgAi~~~~~ 58 (144)
...|++||||||--+.+.
T Consensus 135 v~~~~AGHilGsa~~~le 152 (427)
T COG1236 135 VTFYNAGHILGSAAILLE 152 (427)
T ss_pred EEEecCCCccceeEEEEE
Confidence 468999999999888765
No 76
>cd03364 TOPRIM_DnaG_primases TOPRIM_DnaG_primases: The topoisomerase-primase (TORPIM) nucleotidyl transferase/hydrolase domain found in the active site regions of proteins similar to Escherichia coli DnaG. Primases synthesize RNA primers for the initiation of DNA replication. DnaG type primases are often closely associated with DNA helicases in primosome assemblies. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). This glutamate and two aspartates, cluster together to form a highly acid surface patch. The conserved glutamate may act as a general base in nucleotide polymerization by primases. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function. E. coli DnaG is a single subunit enzyme.
Probab=26.58 E-value=94 Score=19.30 Aligned_cols=19 Identities=21% Similarity=0.046 Sum_probs=15.5
Q ss_pred HHHHHHHHHHhcCceeEEe
Q psy18174 120 TMNVLTKRLQQDGCQVVCL 138 (144)
Q Consensus 120 ~~~~~~~~L~~~g~~~~~l 138 (144)
....+.++|...|+.++++
T Consensus 59 a~~~~~~~l~~~g~~~~~~ 77 (79)
T cd03364 59 AALRALELLLKLGLNVRVL 77 (79)
T ss_pred HHHHHHHHHHHCCCeEEEE
Confidence 5578889999999998765
No 77
>TIGR01090 apt adenine phosphoribosyltransferase. A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.
Probab=25.73 E-value=1.6e+02 Score=21.24 Aligned_cols=31 Identities=10% Similarity=0.157 Sum_probs=24.4
Q ss_pred CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce
Q psy18174 90 KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ 134 (144)
Q Consensus 90 ~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~ 134 (144)
.+++|++.||- +....++..+.+.|++.|.+
T Consensus 108 ~gk~VLIVDDI--------------itTG~Tl~~a~~~L~~~Ga~ 138 (169)
T TIGR01090 108 PGQRVLIVDDL--------------LATGGTAEATDELIRKLGGE 138 (169)
T ss_pred CcCEEEEEecc--------------ccchHHHHHHHHHHHHcCCE
Confidence 56799999987 22345899999999999987
No 78
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=25.70 E-value=97 Score=21.15 Aligned_cols=28 Identities=18% Similarity=-0.002 Sum_probs=17.0
Q ss_pred CCccCHHHHHHHhccCCCCeEEEeecCcch
Q psy18174 14 ELCVSKSWLLQELRSDPSRLIILDCRSSNE 43 (144)
Q Consensus 14 ~~~Is~~~L~~~l~~~~~~~~IlD~R~~~~ 43 (144)
...+++++|.++-+ .+=-.||+.|+..+
T Consensus 12 s~Q~~~~d~~~la~--~GfktVInlRpd~E 39 (110)
T PF04273_consen 12 SGQPSPEDLAQLAA--QGFKTVINLRPDGE 39 (110)
T ss_dssp ECS--HHHHHHHHH--CT--EEEE-S-TTS
T ss_pred CCCCCHHHHHHHHH--CCCcEEEECCCCCC
Confidence 45789999998887 45567999997644
No 79
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=25.17 E-value=2.7e+02 Score=20.17 Aligned_cols=46 Identities=15% Similarity=0.095 Sum_probs=27.7
Q ss_pred HhhCCCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCceeEEeecccc
Q psy18174 86 MNAYKDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQVVCLLVLKY 143 (144)
Q Consensus 86 ~~~~~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~l~G~~~ 143 (144)
...++++.||+-|.. |... . .-.+...+......|.+++|+-||=|
T Consensus 60 l~~~~~~~~i~LDe~------Gk~~-----s-S~~fA~~l~~~~~~g~~i~FvIGGa~ 105 (153)
T TIGR00246 60 LAAIGKAHVVTLDIP------GKPW-----T-TPQLADTLEKWKTDGRDVTLLIGGPE 105 (153)
T ss_pred HHhCCCCeEEEEcCC------CCcC-----C-HHHHHHHHHHHhccCCeEEEEEcCCC
Confidence 333456789999988 2211 1 11344445555567767999999854
No 80
>KOG2935|consensus
Probab=23.41 E-value=90 Score=25.05 Aligned_cols=23 Identities=17% Similarity=0.258 Sum_probs=19.6
Q ss_pred cHHHHHHHHHHhcCceeEEeecc
Q psy18174 119 DTMNVLTKRLQQDGCQVVCLLVL 141 (144)
Q Consensus 119 ~~~~~~~~~L~~~g~~~~~l~G~ 141 (144)
-.+..++..|..+||.+++.+|.
T Consensus 140 tyls~FL~qlq~egySIFVVkG~ 162 (315)
T KOG2935|consen 140 TYLSAFLAQLQQEGYSIFVVKGD 162 (315)
T ss_pred HHHHHHHHHHHhCCeeEEEEecC
Confidence 35578888999999999999985
No 81
>COG3682 Predicted transcriptional regulator [Transcription]
Probab=22.94 E-value=47 Score=23.50 Aligned_cols=29 Identities=21% Similarity=0.121 Sum_probs=24.4
Q ss_pred CCccHHHHHHHHHHhcCceeEEeeccccC
Q psy18174 116 TASDTMNVLTKRLQQDGCQVVCLLVLKYR 144 (144)
Q Consensus 116 ~~~~~~~~~~~~L~~~g~~~~~l~G~~~~ 144 (144)
++..+..++++.|.+.|+-...-.|++|+
T Consensus 36 ws~sTV~TLl~RL~KKg~l~~~kdgr~~~ 64 (123)
T COG3682 36 WSYSTVKTLLNRLVKKGLLTRKKDGRAFR 64 (123)
T ss_pred ccHHHHHHHHHHHHhccchhhhhcCCeee
Confidence 45568999999999999988888888774
No 82
>TIGR00201 comF comF family protein. This protein is found in species that do (Bacillus subtilis, Haemophilus influenzae) or do not (E. coli, Borrelia burgdorferi) have described systems for natural transformation with exogenous DNA. It is involved in competence for transformation in Bacillus subtilis.
Probab=22.35 E-value=1.6e+02 Score=21.61 Aligned_cols=31 Identities=19% Similarity=0.281 Sum_probs=24.0
Q ss_pred CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce
Q psy18174 90 KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ 134 (144)
Q Consensus 90 ~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~ 134 (144)
.+.+|++.||-- ....++....+.|.+.|..
T Consensus 151 ~~~~vllvDDV~--------------TTGaTl~~~~~~L~~~Ga~ 181 (190)
T TIGR00201 151 QGRNIVLVDDVV--------------TTGATLHEIARLLLELGAA 181 (190)
T ss_pred CCCEEEEEeeee--------------ccHHHHHHHHHHHHHcCCC
Confidence 356899999872 2244899999999998876
No 83
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=21.88 E-value=1.4e+02 Score=18.60 Aligned_cols=32 Identities=13% Similarity=0.246 Sum_probs=25.3
Q ss_pred ccc-CCCccCHHHHHHHhccCCCCeEEEeecCcc
Q psy18174 10 FTT-LELCVSKSWLLQELRSDPSRLIILDCRSSN 42 (144)
Q Consensus 10 ~~~-~~~~Is~~~L~~~l~~~~~~~~IlD~R~~~ 42 (144)
|.+ .+..|+-+++++++.. +..+.|+|+.+-+
T Consensus 12 YDT~~s~YiTL~di~~lV~~-g~~~~V~D~ktge 44 (64)
T PF07879_consen 12 YDTETSSYITLEDIAQLVRE-GEDFKVVDAKTGE 44 (64)
T ss_pred ccCCCceeEeHHHHHHHHHC-CCeEEEEECCCCc
Confidence 455 4568999999999986 6789999997543
No 84
>PRK02304 adenine phosphoribosyltransferase; Provisional
Probab=21.86 E-value=2.3e+02 Score=20.49 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=24.4
Q ss_pred CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce
Q psy18174 90 KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ 134 (144)
Q Consensus 90 ~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~ 134 (144)
.+++|++.||- +....++..+.+.|++.|.+
T Consensus 113 ~g~~VLIVDDi--------------vtTG~Tl~~~~~~l~~~Ga~ 143 (175)
T PRK02304 113 PGDRVLIVDDL--------------LATGGTLEAAIKLLERLGAE 143 (175)
T ss_pred CCCEEEEEeCC--------------ccccHHHHHHHHHHHHcCCE
Confidence 57799999987 22244888999999998887
No 85
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=20.59 E-value=2e+02 Score=23.40 Aligned_cols=25 Identities=8% Similarity=0.170 Sum_probs=19.2
Q ss_pred ccCHHHHHHHhccC-CCCeEEEeecC
Q psy18174 16 CVSKSWLLQELRSD-PSRLIILDCRS 40 (144)
Q Consensus 16 ~Is~~~L~~~l~~~-~~~~~IlD~R~ 40 (144)
.|++..++++|+.. -..++.+|..+
T Consensus 110 ~isak~va~ll~~~g~d~vitvD~H~ 135 (319)
T PRK04923 110 PITAKVAAKMISAMGADRVLTVDLHA 135 (319)
T ss_pred CccHHHHHHHHHhcCCCEEEEEeCCh
Confidence 58888889998853 35688899975
No 86
>PRK06031 phosphoribosyltransferase; Provisional
Probab=20.20 E-value=1.9e+02 Score=22.51 Aligned_cols=39 Identities=10% Similarity=0.095 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCCccccccccccccCCCccHHHHHHHHHHhcCce-----eEEeeccc
Q psy18174 90 KDSLFVVYGDSCMSEVEVRDREKHCYTASDTMNVLTKRLQQDGCQ-----VVCLLVLK 142 (144)
Q Consensus 90 ~~~~VVvYD~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~g~~-----~~~l~G~~ 142 (144)
.++.|+|-||- .....++..+.+.|++.|.+ +.+.+|.+
T Consensus 153 ~GkrVLIVDDV--------------itTG~Tl~aa~~lL~~~Ga~Vvgv~v~v~~g~~ 196 (233)
T PRK06031 153 EGRRVALIDDV--------------ISSGASIVAGLRLLAACGIEPAGIGAAMLQSER 196 (233)
T ss_pred CCCEEEEEEeE--------------ccccHHHHHHHHHHHHcCCeEEEEEEEEEcccc
Confidence 56799999987 22244888899999988866 34455544
No 87
>PRK11633 cell division protein DedD; Provisional
Probab=20.07 E-value=88 Score=24.37 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=17.9
Q ss_pred ccHHHHHHHHHHhcCceeEEe
Q psy18174 118 SDTMNVLTKRLQQDGCQVVCL 138 (144)
Q Consensus 118 ~~~~~~~~~~L~~~g~~~~~l 138 (144)
...+..+..+|+..||++|..
T Consensus 160 ~~~A~~l~~kL~~~G~~Ay~~ 180 (226)
T PRK11633 160 ADKVNEIVAKLRLSGYRVYTV 180 (226)
T ss_pred HHHHHHHHHHHHHCCCeeEEE
Confidence 346788999999999999984
Done!