BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18175
(132 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 103 bits (256), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Query: 41 WPKG-SKFNHSHCTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLV 99
W + S+F F +EA SQ+ GVLVHCLAGVSRSVT+TVAYLM L LSLNDA+ LV
Sbjct: 60 WSQNLSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDAYDLV 119
Query: 100 RARKSNIAPNFHFMEQLNSFEKEL 123
+ +KSNI+PNF+FM QL FE+ L
Sbjct: 120 KRKKSNISPNFNFMGQLLDFERSL 143
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 102 bits (253), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 79/127 (62%), Gaps = 5/127 (3%)
Query: 1 MAPIAIRTYLSGLPDSVCVLIKYQADLFSHTCQVFLIVCGWPKG-SKFNHSHCTFTEEAR 59
+A + IR L+ P+ + + D H Q+ I W + S+F F +EA
Sbjct: 27 LAKLGIRYILNVTPN-LPNFFEKNGDF--HYKQI-PISDHWSQNLSRFFPEAIEFIDEAL 82
Query: 60 SQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSF 119
SQ+ GVLVH LAGVSRSVT+TVAYLM L LSLNDA+ LV+ +KSNI+PNF+FM QL F
Sbjct: 83 SQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDF 142
Query: 120 EKELMEA 126
E+ L E
Sbjct: 143 ERSLREG 149
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 99.4 bits (246), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 61/79 (77%)
Query: 45 SKFNHSHCTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKS 104
S+F +F +EAR ++ GVLVH LAG+SRSVT+TVAYLM L LS+NDA+ +V+ +KS
Sbjct: 66 SQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKS 125
Query: 105 NIAPNFHFMEQLNSFEKEL 123
NI+PNF+FM QL FE+ L
Sbjct: 126 NISPNFNFMGQLLDFERTL 144
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 72.0 bits (175), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 64 GVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKEL 123
G+L+HC AGVSRS TI +AYLM R+++ DA+ V+ ++ I+PN +FM QL FE++L
Sbjct: 89 GLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDL 148
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 64 GVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKEL 123
G+L+HC AGVSRS TI +AYLM R+++ DA+ V+ ++ I+PN +FM QL FE++L
Sbjct: 85 GLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDL 144
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 54 FTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFM 113
F + ++ VLVH AG+SRS TI +AYLM + R+ L++AF V+ R+ I+PNF FM
Sbjct: 73 FIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSFM 132
Query: 114 EQLNSFEKELM 124
QL FE +++
Sbjct: 133 GQLLQFETQVL 143
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 54 FTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFM 113
F + R + VLVH AG+SRS TI +AYLM + L +AF ++ R+S ++PNF FM
Sbjct: 75 FIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGFM 134
Query: 114 EQLNSFEKELMEARLQQQ 131
QL +E E++ + Q
Sbjct: 135 GQLLQYESEILPSTPNPQ 152
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 39/68 (57%)
Query: 54 FTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFM 113
F E R + LVHCLAGVSRSVT+ +AY+M+ DA VRA +S PN F
Sbjct: 75 FIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQ 134
Query: 114 EQLNSFEK 121
QL FEK
Sbjct: 135 RQLQEFEK 142
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 65 VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKELM 124
VLVH AG+SRS TI +AYLM R+ L +AF V+ R+S I+PNF FM QL FE +++
Sbjct: 84 VLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQVL 143
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 54 FTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFM 113
F EEA+ +D VLVH AGVSR+ I + +LM++ + S AF+LV+ + +I PN FM
Sbjct: 73 FIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFM 132
Query: 114 EQLNSFEK 121
EQL ++++
Sbjct: 133 EQLRTYQE 140
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 66 LVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKEL 123
LVHC AGVSRS T+ +AYLM + L +A+ V+AR+ I PN F QL +E++L
Sbjct: 107 LVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRPVIRPNVGFWRQLIDYERQL 164
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 45 SKFNHSHCTFTEEARSQD-TGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARK 103
S F + F + A S D + +LVHC+ G SRS T+ +AYLM ++L DA V A+
Sbjct: 121 SVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQV-AKN 179
Query: 104 SNIAPNFHFMEQLNSFEKELM 124
+ PN F++QL +K+L+
Sbjct: 180 RCVLPNRGFLKQLRELDKQLV 200
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 54 FTEEARSQDTG-VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHF 112
F ++A +Q G VLVHC G SRS T+ +AYLM ++ + A ++VR + I PN F
Sbjct: 106 FIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGF 164
Query: 113 MEQL 116
+ QL
Sbjct: 165 LAQL 168
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 54 FTEEARSQDTG-VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHF 112
F ++A +Q G VLVHC G SRS T+ +AYLM ++ + A ++VR + I PN F
Sbjct: 107 FIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGF 165
Query: 113 MEQL 116
+ QL
Sbjct: 166 LAQL 169
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 48 NHSHCTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIA 107
+H H ++ R+ L+HC AGVSRS + +AYLM +SL DA T ++ + I
Sbjct: 88 DHIHSVEMKQGRT-----LLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRPIIR 142
Query: 108 PNFHFMEQLNSFEKEL 123
PN F EQL +E +L
Sbjct: 143 PNSGFWEQLIHYEFQL 158
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 54 FTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFM 113
F + + VLVH AG+SRS +AY+M + DAF V+ R+ I PN F+
Sbjct: 82 FIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFV 141
Query: 114 EQLNSFE 120
QL +E
Sbjct: 142 HQLQEYE 148
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 52 CTFTEEARSQDTG-VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNF 110
F A SQ G +LVHC GVSRS T+ +AYLM L+L +A V+ + I PN
Sbjct: 74 ADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHRG-IIPNR 132
Query: 111 HFMEQLNSFEKELMEA 126
F+ QL + ++ L +
Sbjct: 133 GFLRQLLALDRRLRQG 148
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 54 FTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFM 113
F +A+ + LVH GVSRS + +AY M +L+ A+ V+ R++ PN FM
Sbjct: 73 FISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFM 132
Query: 114 EQLNSFEKELM 124
QL ++ L+
Sbjct: 133 RQLEEYQGILL 143
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 21 IKYQADLFSHTCQVFLIVCGWPKGSKFNHSHCTFTEEARSQDTGVLVHCLAGVSRSVTIT 80
++Y + H Q+ L P + H+ T E+ +L+HC G+SRS T+
Sbjct: 86 VEYHHYRWEHDSQIAL---DLPSLTSIIHAATTKREK-------ILIHCQCGLSRSATLI 135
Query: 81 VAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFE 120
+AY+M LSL ++ L+++R I P+ + QL +E
Sbjct: 136 IAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWE 175
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 52 CTFTEEARSQDTG-VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNF 110
F ++A +Q G VLVH G SRS T+ +AYLM ++ + A ++VR + I PN
Sbjct: 105 ADFIDQALAQKNGRVLVHSREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPND 163
Query: 111 HFMEQL 116
F+ QL
Sbjct: 164 GFLAQL 169
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 65 VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKEL 123
VLVHC GVSRS T+ +A+LM ++L +A V+A + NI PN F+ QL + L
Sbjct: 134 VLVHCAMGVSRSATLVLAFLMICENMTLVEAIQTVQAHR-NICPNSGFLRQLQVLDNRL 191
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 65 VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKEL 123
VLVHC GVSRS T+ +A+LM ++L +A V+A + NI PN F+ QL + L
Sbjct: 134 VLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAHR-NICPNSGFLRQLQVLDNRL 191
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
C E A LV+C G SRS + AYLM SL+ AF +V++ + PN
Sbjct: 79 CAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARPVAEPNLG 138
Query: 112 FMEQLNSFEKEL 123
F QL +E+ L
Sbjct: 139 FWAQLQKYEQTL 150
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 52 CTFTEEARSQDTG-VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNF 110
F A SQ G +LVH GVSRS T+ +AYLM L+L +A V+ + I PN
Sbjct: 75 ADFIHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHRG-IIPNR 133
Query: 111 HFMEQLNSFEKELMEA 126
F+ QL + ++ L +
Sbjct: 134 GFLRQLLALDRRLRQG 149
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 47 FNHSHCTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNI 106
N HC R LVH AG+SRS TI AY+M+ L D ++A +
Sbjct: 74 INFIHC-----CRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRPIA 128
Query: 107 APNFHFMEQLNSF 119
PN F +QL F
Sbjct: 129 NPNPGFRQQLEEF 141
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 21 IKYQADLFSHTCQVFLIVCGWPKGSKFNHSHCTFTEEARSQDTGVLVHCLAGVSRSVTIT 80
++Y + H Q+ L P + H+ T E+ +L+H G+SRS T+
Sbjct: 86 VEYHHYRWEHDSQIAL---DLPSLTSIIHAATTKREK-------ILIHSQCGLSRSATLI 135
Query: 81 VAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFE 120
+AY+M LSL ++ L+++R I P+ + QL +E
Sbjct: 136 IAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWE 175
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 21 IKYQADLFSHTCQVFLIVCGWPKGSKFNHSHCTFTEEARSQDTGVLVHCLAGVSRSVTIT 80
++Y + H Q+ L P + H+ T E+ +L+H G+SRS T+
Sbjct: 86 VEYHHYRWEHDSQIAL---DLPSLTSIIHAATTKREK-------ILIHXQCGLSRSATLI 135
Query: 81 VAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFE 120
+AY+M LSL ++ L+++R I P+ + QL +E
Sbjct: 136 IAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWE 175
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 65 VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKEL 123
V VHC AG SRS T+ AYL+ S +A + +S+I+ +E L F KE+
Sbjct: 92 VYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKEI 150
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 27 LFSHTCQVFLIVCGWPKGSKFNHS---HCTFTEEARSQDTGVLVHCLAGVSRSVTITVAY 83
LF C + + +G + S F + + GVL+ GV+++ I +A+
Sbjct: 49 LFKDQCDILRLDIVSEEGHQLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAF 108
Query: 84 LMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKEL 123
LM RLS +AF V+ I F+ QL FEK+L
Sbjct: 109 LMYYQRLSFINAFNKVQGLYPLIDIESGFILQLKLFEKKL 148
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 54 FTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARK--SNIAPNFH 111
F + + + + VHC AG+ R+ T+ Y+M R++ + VR + S I P
Sbjct: 261 FLDICENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQ 320
Query: 112 F--MEQLNSF-EKELMEARLQQQE 132
F M+Q N + E + +L+ QE
Sbjct: 321 FLVMKQTNLWLEGDYFRQKLKGQE 344
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 65 VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKEL 123
V VH AG SRS T+ AYL+ S +A + +S+I+ +E L F KE+
Sbjct: 93 VYVHSKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKEI 151
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 42 PKGSKFNHSHCTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVR 100
P S+F T + S+ G LVHC+ G+ R+ TI +YL+ L + A VR
Sbjct: 73 PSDSQF----LTIMKWLLSEKEGNLVHCVGGIGRTGTILASYLILTEGLEVESAIDEVR 127
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 45 SKFNHSHCTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSL 92
SK+ F + ++ VLVH AGV+RS + +AYLMS + SL
Sbjct: 91 SKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESL 138
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 45 SKFNHSHCTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSL 92
SK+ F + ++ VLVHC AGV+RS +AYL S + SL
Sbjct: 108 SKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAXILAYLXSKNKESL 155
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 45 SKFNHSHCTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMS 86
SK+ F + ++ VLVHC+AGV+RS +AYL S
Sbjct: 87 SKYFDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAXILAYLXS 128
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 54 FTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARK--SNIAPNFH 111
F + + + + VH AG+ R+ T+ Y+M R++ + VR + S I P
Sbjct: 261 FLDICENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQ 320
Query: 112 F--MEQLNSF-EKELMEARLQQQE 132
F M+Q N + E + +L+ QE
Sbjct: 321 FLVMKQTNLWLEGDYFRQKLKGQE 344
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 54 FTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVR 100
+EA ++ V VHC G R+ T+ YL+ L+ DA +R
Sbjct: 80 IVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIR 126
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 42 PKGSKFNHSHCTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVR 100
P S+F T + S+ G LVH + G+ R+ TI +YL+ L + A VR
Sbjct: 73 PSDSQF----LTIMKWLLSEKEGNLVHSVGGIGRTGTILASYLILTEGLEVESAIDEVR 127
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 54 FTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVR 100
+EA ++ V VHC G R+ T YL+ L+ DA +R
Sbjct: 81 IVDEANARGEAVGVHCALGFGRTGTXLACYLVKERGLAAGDAIAEIR 127
>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
Length = 575
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 55 TEEARSQDTGVLVHCLAGVSRS-VTITVAYLMSALRL-SLNDAFTLVRARKS 104
T+E QD + VHC AGV R+ V IT++ ++ +R + D F V+ ++
Sbjct: 493 TKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRT 544
>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
Sigma
Length = 595
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 55 TEEARSQDTGVLVHCLAGVSRS-VTITVAYLMSALRL-SLNDAFTLVR 100
T+E QD + VHC AGV R+ V IT++ ++ +R + D F V+
Sbjct: 505 TKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVK 552
>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
Length = 583
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 55 TEEARSQDTGVLVHCLAGVSRS-VTITVAYLMSALRL-SLNDAFTLVRARKS 104
T+E QD + VHC AGV R+ V IT++ ++ +R + D F V+ ++
Sbjct: 507 TKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKVLRT 558
>pdb|3S4O|A Chain A, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
pdb|3S4O|B Chain B, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
Length = 167
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 55 TEEARSQDTG------VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSN 105
TE AR Q+ + VHC+AG+ R+ + L+ +S DA L+R ++
Sbjct: 96 TELARQQEDPSVPPPTIGVHCVAGLGRAPILVALALVEYGNVSALDAIALIREKRKG 152
>pdb|2HY3|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
pdb|2HY3|B Chain B, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
Length = 313
Score = 28.9 bits (63), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVTITV 81
AR +TG VLVHC AGV R+ T V
Sbjct: 231 ARXPETGPVLVHCSAGVGRTGTYIV 255
>pdb|2PBN|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma
Length = 313
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVTITV 81
AR +TG VLVHC AGV R+ T V
Sbjct: 231 ARMPETGPVLVHCSAGVGRTGTYIV 255
>pdb|2NLK|A Chain A, Crystal Structure Of D1 And D2 Catalytic Domains Of Human
Protein Tyrosine Phosphatase Gamma (D1+d2 Ptprg)
Length = 627
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVTITV 81
AR +TG VLVHC AGV R+ T V
Sbjct: 223 ARMPETGPVLVHCSAGVGRTGTYIV 247
>pdb|3QCL|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-(4-Hydroxybut-1-Yn-1-
Yl)benzoic Acid
pdb|3QCN|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Trigonal Crystal Form
Length = 310
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVTITV 81
AR +TG VLVHC AGV R+ T V
Sbjct: 230 ARMPETGPVLVHCSAGVGRTGTYIV 254
>pdb|3QCM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
pdb|3QCM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
Length = 310
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVTITV 81
AR +TG VLVHC AGV R+ T V
Sbjct: 230 ARMPETGPVLVHCSAGVGRTGTYIV 254
>pdb|3QCB|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCB|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCC|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCC|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCD|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Trigonal Crystal Form
pdb|3QCE|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCE|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCF|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCF|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCG|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3-Bromo-4-Chlorobenzyl)sulfanyl]thiophene-2-
Carboxylic Acid
pdb|3QCH|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]-N-(Methylsulfonyl)
Thiophene-2-Carboxamide
pdb|3QCI|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
N-[(3-Aminophenyl)sulfonyl]-3-[(3,4-Dichlorobenzyl)
Sulfanyl]thiophene-2-Carboxamide
pdb|3QCJ|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
5-[({3-[(3,4-Dichlorobenzyl)sulfanyl]thiophen-2-
Yl}carbonyl)sulfamoyl]-2-Methoxybenzoic Acid
pdb|3QCK|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]benzoic Acid
Length = 310
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVTITV 81
AR +TG VLVHC AGV R+ T V
Sbjct: 230 ARMPETGPVLVHCSAGVGRTGTYIV 254
>pdb|2H4V|A Chain A, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
pdb|2H4V|B Chain B, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
Length = 320
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVTITV 81
AR +TG VLVHC AGV R+ T V
Sbjct: 241 ARMPETGPVLVHCSAGVGRTGTYIV 265
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 65 VLVHCLAGVSRSVTITVAY--LMSALRLSLNDA--FTLVRARKSNIAPNFHFMEQLNSF 119
+LVHC AG+ R+ T+ AY L+ R L D+ +++V A K F +++L +
Sbjct: 225 ILVHCSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIVAAMKQK---RFGMVQRLEQY 280
>pdb|1R6H|A Chain A, Solution Structure Of Human Prl-3
Length = 172
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 65 VLVHCLAGVSRS-VTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKEL 123
V VHC+AG+ R+ V + +A + S ++ DA +R ++ + +QL EK
Sbjct: 103 VAVHCVAGLGRAPVLVALALIESGMK--YEDAIQFIRQKRRGAINS----KQLTYLEKYR 156
Query: 124 MEARLQ 129
+ RL+
Sbjct: 157 PKQRLR 162
>pdb|1V3A|A Chain A, Structure Of Human Prl-3, The Phosphatase Associated With
Cancer Metastasis
Length = 173
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 65 VLVHCLAGVSRS-VTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKEL 123
V VHC+AG+ R+ V + +A + S ++ DA +R ++ + +QL EK
Sbjct: 100 VAVHCVAGLGRAPVLVALALIESGMK--YEDAIQFIRQKRRGAINS----KQLTYLEKYR 153
Query: 124 MEARLQ 129
+ RL+
Sbjct: 154 PKQRLR 159
>pdb|1XXV|A Chain A, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
pdb|1XXV|B Chain B, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
Length = 306
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 66 LVHCLAGVSRSVTITVAYLMSALR---LSLNDAFTLVRARKSNI 106
++HC AGV R+ + A M+ R LS+ D + +R +++ I
Sbjct: 238 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGI 281
>pdb|3U96|A Chain A, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
pdb|3U96|B Chain B, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
Length = 306
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 66 LVHCLAGVSRSVTITVAYLMSALR---LSLNDAFTLVRARKSNI 106
++HC AGV R+ + A M+ R LS+ D + +R +++ I
Sbjct: 238 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGI 281
>pdb|1YPT|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|1YPT|B Chain B, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|3BLU|A Chain A, Crystal Structure Yoph Complexed With Inhibitor Pvs
pdb|3BLT|A Chain A, Crystal Structures Of Yoph Complexed With Pvsn And Pvs,
Inhibitors Of Yoph Which Co-Valent Bind To Cys Of Active
Site
Length = 305
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 66 LVHCLAGVSRSVTITVAYLMSALR---LSLNDAFTLVRARKSNI 106
++HC AGV R+ + A M+ R LS+ D + +R +++ I
Sbjct: 237 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGI 280
>pdb|1QZ0|A Chain A, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|1QZ0|B Chain B, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|2I42|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
Complexed With Vanadate, A Transition State Analogue
pdb|1YTN|A Chain A, Hydrolase
pdb|1YTW|A Chain A, Yersinia Ptpase Complexed With Tungstate
pdb|2Y2F|A Chain A, Crystal Structure Of Yersinia Pestis Yoph In Complex With
An Aminooxy-Containing Platform Compound For Inhibitor
Design
pdb|2YDU|A Chain A, Crystal Structure Of Yoph In Complex With
3-(1,1-Dioxido-3-Oxoisothiazolidin-5-Yl)benzaldeyde
Length = 306
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 66 LVHCLAGVSRSVTITVAYLMSALR---LSLNDAFTLVRARKSNI 106
++HC AGV R+ + A M+ R LS+ D + +R +++ I
Sbjct: 238 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGI 281
>pdb|3F99|A Chain A, W354f Yersinia Enterocolitica Ptpase Apo Form
pdb|3F9A|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Tungstate
pdb|3F9B|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Divanadate
Length = 306
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 66 LVHCLAGVSRSVTITVAYLMSALR---LSLNDAFTLVRARKSNI 106
++HC AGV R+ + A M+ R LS+ D + +R +++ I
Sbjct: 238 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGI 281
>pdb|3BM8|A Chain A, Crystal Structure Of Yoph Mutant D356a Complexed With
Irreversible Inhibitor Pvsn
Length = 305
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 66 LVHCLAGVSRSVTITVAYLMSALR---LSLNDAFTLVRARKSNI 106
++HC AGV R+ + A M+ R LS+ D + +R +++ I
Sbjct: 237 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGI 280
>pdb|1PA9|A Chain A, Yersinia Protein-Tyrosine Phosphatase Complexed With Pncs
(Yop51,Pasteurella X,Ptpase,Yop51delta162) (Catalytic
Domain, Residues 163-468) Mutant With Cys 235 Replaced
By Arg (C235r)
Length = 284
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 66 LVHCLAGVSRSVTITVAYLMSALR---LSLNDAFTLVRARKSNI 106
++HC AGV R+ + A M+ R LS+ D + +R +++ I
Sbjct: 216 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGI 259
>pdb|3S3E|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3E|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3F|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3F|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3H|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3H|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3K|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
pdb|3S3K|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
Length = 307
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 54 FTEEARSQDTGVLVHCLAGVSRSVT-ITVAYLMSALRLS-LNDAFTLVRA-RKSNI 106
F + ++ ++VHC AGV RS T IT+ ++ + S D F +V A RK +
Sbjct: 227 FRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERV 282
>pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|B Chain B, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|C Chain C, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
Length = 169
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 54 FTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDA---FTLVRARK 103
FTE+ GV HC G++R+ + YLM L ++ +A F R K
Sbjct: 107 FTEKCPGMLVGV--HCTHGINRTGYMVCRYLMHTLGIAPQEAIDRFEKARGHK 157
>pdb|3TSA|A Chain A, Spinosyn Rhamnosyltransferase Spng
pdb|3TSA|B Chain B, Spinosyn Rhamnosyltransferase Spng
Length = 391
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 7 RTYLSGLPDSVCVLIKYQADLFSHTCQVFLIVCGWPKGSKFN 48
R L+ LPD+ + +LF TC+ L++C G+ F
Sbjct: 262 RALLTDLPDNARIAESVPLNLFLRTCE--LVICAGGSGTAFT 301
>pdb|3UYK|A Chain A, Spinosyn Rhamnosyltransferase Spng Complexed With Spinosyn
Aglycone
pdb|3UYK|B Chain B, Spinosyn Rhamnosyltransferase Spng Complexed With Spinosyn
Aglycone
pdb|3UYL|A Chain A, Spinosyn Rhamnosyltransferase Spng Complexed With
Thymidine Diphosphate
pdb|3UYL|B Chain B, Spinosyn Rhamnosyltransferase Spng Complexed With
Thymidine Diphosphate
Length = 387
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 7 RTYLSGLPDSVCVLIKYQADLFSHTCQVFLIVCGWPKGSKFN 48
R L+ LPD+ + +LF TC+ L++C G+ F
Sbjct: 262 RALLTDLPDNARIAESVPLNLFLRTCE--LVICAGGSGTAFT 301
>pdb|3FF7|C Chain C, Structure Of Nk Cell Receptor Klrg1 Bound To E-Cadherin
pdb|3FF7|D Chain D, Structure Of Nk Cell Receptor Klrg1 Bound To E-Cadherin
Length = 112
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 50 SHCTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKS 104
+HC + L CLA S + IT MS L++ L++AF+ + R +
Sbjct: 10 NHCYYFSVEEKDWNSSLEFCLARDSHLLVITDNQEMSLLQVFLSEAFSWIGLRNN 64
>pdb|4A8J|B Chain B, Crystal Structure Of The Elongator Subcomplex Elp456
pdb|4A8J|E Chain E, Crystal Structure Of The Elongator Subcomplex Elp456
Length = 270
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 81 VAYLMSALRLSL---NDAFTL--VRARKSNIAPNFHFMEQLNSFEKELMEARLQQQE 132
V+ L++ R+ ND F L V RKS + + F+ N+ E EL+ Q++E
Sbjct: 184 VSELLNEFRIPRGLNNDIFQLRLVNKRKSGRSLEYDFIVNSNTHEYELLSTTKQEEE 240
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 65 VLVHCLAGVSRSVTITVAY 83
V+VHC AG+ R+ T+ AY
Sbjct: 222 VVVHCSAGIGRTGTLIGAY 240
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,385,546
Number of Sequences: 62578
Number of extensions: 113776
Number of successful extensions: 426
Number of sequences better than 100.0: 68
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 376
Number of HSP's gapped (non-prelim): 71
length of query: 132
length of database: 14,973,337
effective HSP length: 88
effective length of query: 44
effective length of database: 9,466,473
effective search space: 416524812
effective search space used: 416524812
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 46 (22.3 bits)