RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy18175
(132 letters)
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase,
structural genomics, PSI-2, protein structure
initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Length = 155
Score = 118 bits (297), Expect = 3e-35
Identities = 49/80 (61%), Positives = 58/80 (72%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
F +EA SQ+ GVLVH LAGVSRSVT+TVAYLM L LSLNDA+ LV+ +KSNI+PNF+
Sbjct: 75 IEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFN 134
Query: 112 FMEQLNSFEKELMEARLQQQ 131
FM QL FE+ L E
Sbjct: 135 FMGQLLDFERSLREGHHHHH 154
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES;
1.50A {Homo sapiens}
Length = 165
Score = 115 bits (291), Expect = 3e-34
Identities = 34/81 (41%), Positives = 42/81 (51%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
F E R + LVHCLAGVSRSVT+ +AY+M+ DA VRA +S PN
Sbjct: 73 IKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVG 132
Query: 112 FMEQLNSFEKELMEARLQQQE 132
F QL FEK + Q +
Sbjct: 133 FQRQLQEFEKHEVHQYRQWLK 153
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI,
protein structure INI NEW YORK SGX research center for
structural genomics; 2.00A {Mus musculus}
Length = 164
Score = 115 bits (290), Expect = 4e-34
Identities = 27/81 (33%), Positives = 38/81 (46%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
C E A LV+C G SRS + AYLM SL+ AF +V++ + PN
Sbjct: 79 CAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARPVAEPNLG 138
Query: 112 FMEQLNSFEKELMEARLQQQE 132
F QL +E+ L + +E
Sbjct: 139 FWAQLQKYEQTLQAQAILPRE 159
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase;
HET: BOG; 2.40A {Homo sapiens}
Length = 160
Score = 115 bits (289), Expect = 5e-34
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
F R LVH AG+SRS TI AY+M+ L D ++A + PN
Sbjct: 74 INFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRPIANPNPG 133
Query: 112 FMEQLNSFEKEL-MEARLQQQE 132
F +QL F + R Q +E
Sbjct: 134 FRQQLEEFGWASSQKLRRQLEE 155
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded
B-sheet, hydrolase; 2.80A {Homo sapiens}
Length = 177
Score = 115 bits (290), Expect = 6e-34
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
F EEA G+L+HC AGVSRS TI +AYLM R+++ DA+ V+ ++ I+PN +
Sbjct: 77 FEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLN 136
Query: 112 FMEQLNSFEKEL 123
FM QL FE++L
Sbjct: 137 FMGQLLEFEEDL 148
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A
{Homo sapiens}
Length = 149
Score = 114 bits (287), Expect = 9e-34
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
F EEA G+L+HC AGVSRS TI +AYLM R+++ DA+ V+ ++ I+PN +
Sbjct: 73 FEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLN 132
Query: 112 FMEQLNSFEKEL 123
FM QL FE++L
Sbjct: 133 FMGQLLEFEEDL 144
>3emu_A Leucine rich repeat and phosphatase domain containing protein;
structural genomics, hydrolase, PSI-2, protein structure
initiative; 2.30A {Entamoeba histolytica}
Length = 161
Score = 113 bits (286), Expect = 2e-33
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
F + + GVL+ GV+++ I +A+LM RLS +AF V+ I
Sbjct: 77 IKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNKVQGLYPLIDIESG 136
Query: 112 FMEQLNSFEKELMEARLQQQE 132
F+ QL FEK+L + +
Sbjct: 137 FILQLKLFEKKLEKMNSEGHH 157
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase,
nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A
Length = 144
Score = 112 bits (283), Expect = 3e-33
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
+ + + VLVH AG+SRS TI +AYLM R+ L +AF V+ R+S I+PNF
Sbjct: 71 IEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFS 130
Query: 112 FMEQLNSFEKELM 124
FM QL FE +++
Sbjct: 131 FMGQLLQFESQVL 143
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase;
2.70A {Homo sapiens}
Length = 211
Score = 114 bits (288), Expect = 3e-33
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
F + R + VLVH AG+SRS TI +AYLM + L +AF ++ R+S ++PNF
Sbjct: 73 IDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFG 132
Query: 112 FMEQLNSFEKELMEARLQQQ 131
FM QL +E E++ + Q
Sbjct: 133 FMGQLLQYESEILPSTPNPQ 152
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase;
2.10A {Homo sapiens}
Length = 145
Score = 112 bits (283), Expect = 3e-33
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
F +A+ + LVH GVSRS + +AY M +L+ A+ V+ R++ PN
Sbjct: 71 YKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPS 130
Query: 112 FMEQLNSFEKEL 123
FM QL ++ L
Sbjct: 131 FMRQLEEYQGIL 142
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics,
phosphatase, PSI-2, protein structure initiative; 1.60A
{Homo sapiens}
Length = 154
Score = 112 bits (282), Expect = 5e-33
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 54 FTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFM 113
F + + VLVH AG+SRS +AY+M + DAF V+ R+ I PN F+
Sbjct: 82 FIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFV 141
Query: 114 EQLNSFEKELM 124
QL +E +
Sbjct: 142 HQLQEYEAIYL 152
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine
phosphatase, hydrolase; 1.26A {Homo sapiens}
Length = 144
Score = 111 bits (281), Expect = 6e-33
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
F EEA+ +D VLVH AGVSR+ I + +LM++ + S AF+LV+ + +I PN
Sbjct: 71 FEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSG 130
Query: 112 FMEQLNSFEKEL 123
FMEQL ++++
Sbjct: 131 FMEQLRTYQEGK 142
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase,
hypothetical protein; 2.7A {Saccharomyces cerevisiae}
PDB: 2j17_A* 2j16_B
Length = 182
Score = 112 bits (282), Expect = 1e-32
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
+ A ++ +L+H G+SRS T+ +AY+M LSL ++ L+++R I P+
Sbjct: 107 TSIIHAATTKREKILIHAQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIG 166
Query: 112 FMEQLNSFEKEL 123
+ QL +E L
Sbjct: 167 LIFQLMEWEVAL 178
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure,
hydrolase; HET: EPE; 2.00A {Homo sapiens}
Length = 188
Score = 112 bits (282), Expect = 1e-32
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
+ L+HC AGVSRS + +AYLM +SL DA T ++ + I PN
Sbjct: 87 ADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRPIIRPNSG 146
Query: 112 FMEQLNSFEKEL 123
F EQL +E +L
Sbjct: 147 FWEQLIHYEFQL 158
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase,
dual specifici phosphatase; 1.88A {Homo sapiens}
Length = 190
Score = 110 bits (278), Expect = 5e-32
Identities = 28/76 (36%), Positives = 39/76 (51%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
+ LVHC AGVSRS T+ +AYLM + L +A+ V+AR+ I PN
Sbjct: 93 ADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRPVIRPNVG 152
Query: 112 FMEQLNSFEKELMEAR 127
F QL +E++L
Sbjct: 153 FWRQLIDYERQLFGKS 168
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein,
structural genomics, NPPSFA, project on protein
structural and functional analyses; 1.67A {Homo sapiens}
Length = 151
Score = 106 bits (268), Expect = 6e-31
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 52 CTFTEEARSQDTG-VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNF 110
F A SQ G +LVHC GVSRS T+ +AYLM L+L +A V+ + I PN
Sbjct: 74 ADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHRG-IIPNR 132
Query: 111 HFMEQLNSFEKELMEAR 127
F+ QL + ++ L +
Sbjct: 133 GFLRQLLALDRRLRQGL 149
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Length = 219
Score = 108 bits (272), Expect = 7e-31
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 52 CTFTEEARSQDTG-VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNF 110
F + A S D +LVHC+ G SRS T+ +AYLM ++L DA V + + PN
Sbjct: 128 AAFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAKNRC-VLPNR 186
Query: 111 HFMEQLNSFEKELMEARLQQQE 132
F++QL +K+L++ R + Q
Sbjct: 187 GFLKQLRELDKQLVQQRRRSQR 208
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein
dual-specificity phosphatase, inhibitor; HET: STT; 1.90A
{Homo sapiens} PDB: 1vhr_A* 1j4x_A*
Length = 183
Score = 106 bits (267), Expect = 2e-30
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 52 CTFTEEARSQDTG-VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNF 110
F ++A +Q G VLVHC G SRS T+ +AYLM ++ + A ++VR + I PN
Sbjct: 104 ADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPND 162
Query: 111 HFMEQLNSFEKELMEAR 127
F+ QL L +
Sbjct: 163 GFLAQLCQLNDRLAKEG 179
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol
phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus
musculus} PDB: 3rgq_A*
Length = 157
Score = 105 bits (263), Expect = 4e-30
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
F + ++ V VHC AG SRS T+ AYL+ S +A + +S+I+
Sbjct: 79 VQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPS 138
Query: 112 FMEQLNSFEKEL 123
+E L F KE+
Sbjct: 139 QLEVLKEFHKEI 150
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual
specificity phosphatase, DUSP13, testis and skeletal
muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Length = 205
Score = 105 bits (263), Expect = 2e-29
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 52 CTFTEEAR-SQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNF 110
+ A VLVHC GVSRS T+ +A+LM ++L +A V+A + NI PN
Sbjct: 120 ARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAHR-NICPNS 178
Query: 111 HFMEQLNSFEKELMEAR 127
F+ QL + L
Sbjct: 179 GFLRQLQVLDNRLGRET 195
>3cm3_A Late protein H1, dual specificity protein phosphatase;
dual-specificity phosphatase, VH1, hydrolase; 1.32A
{Vaccinia virus} PDB: 2rf6_A 2p4d_A
Length = 176
Score = 99.0 bits (247), Expect = 2e-27
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLN-----DAFTLVRARKSNI 106
F + ++ VLVH AGV+RS + +AYLMS + SL + +R +
Sbjct: 98 TAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAF 157
Query: 107 APNFHFMEQLNSFEKELM 124
N F Q+ EK ++
Sbjct: 158 VENPSFKRQI--IEKYVI 173
>2q05_A Late protein H1, dual specificity protein phosphatase; structural
genomics, APC7320, P protein structure initiative; HET:
MSE; 2.57A {Vaccinia virus WR}
Length = 195
Score = 97.5 bits (243), Expect = 9e-27
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLN-----DAFTLVRARKSNI 106
F + ++ VLVHC AGV+RS + +AYLMS + SL + +R +
Sbjct: 115 TAFLSKCDQRNEPVLVHCAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAF 174
Query: 107 APNFHFMEQLNSFEKELME 125
N F Q+ EK +++
Sbjct: 175 VENPSFKRQI--IEKYVID 191
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual
specicity protein phosphatase 23, DUS23_human, malate,
structural genomics, PSI; 1.93A {Homo sapiens}
Length = 151
Score = 68.2 bits (167), Expect = 8e-16
Identities = 16/72 (22%), Positives = 29/72 (40%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
+EA ++ V VHC G R+ T+ YL+ L+ DA +R + +
Sbjct: 79 VQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRLRPGSIETYE 138
Query: 112 FMEQLNSFEKEL 123
+ + F +
Sbjct: 139 QEKAVFQFYQRT 150
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 63.2 bits (153), Expect = 4e-13
Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 52 CTFTEEARSQDTG-VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNF 110
+A ++ G VH AG+ R+ + + Y+ L +A L+ +++S
Sbjct: 95 VGTLYKAVKRNGGVTYVHSTAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKRSCFPKLD 154
Query: 111 HFMEQLNSFE 120
Sbjct: 155 AIRNATIDIL 164
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 57.3 bits (138), Expect = 6e-11
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRA--RKSNIAPN 109
F + + + + VH AG+ R+ T+ Y+M R++ + VR S I P
Sbjct: 259 KEFLDICENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQ 318
Query: 110 FHFMEQLNS---FEKELMEARLQQQE 132
F+ + E + +L+ QE
Sbjct: 319 QQFLVMKQTNLWLEGDYFRQKLKGQE 344
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA
processing, multifunctional enzyme,
nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A
1i9t_A
Length = 241
Score = 53.6 bits (128), Expect = 9e-10
Identities = 13/69 (18%), Positives = 29/69 (42%)
Query: 59 RSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNS 118
R+ + VHC G +R+ + A+L+ + S+ A + ++++L
Sbjct: 138 RNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELFR 197
Query: 119 FEKELMEAR 127
++ EA
Sbjct: 198 RYGDIEEAP 206
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 49.5 bits (118), Expect = 1e-08
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRAR 102
T + S+ G LVHC+ G+ R+ TI +YL+ L + A VR
Sbjct: 79 LTIMKWLLSEKEGNLVHCVGGIGRTGTILASYLILTEGLEVESAIDEVRLV 129
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine
phosphatase, P-loop, hydrolase; HET: PO4; 1.50A
{Autographa californicanucleopolyhedrovirus}
Length = 169
Score = 46.8 bits (111), Expect = 1e-07
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 49 HSHCTFTEEARSQDTG--VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNI 106
+E + G V VHC G++R+ + YLM L ++ +A + +
Sbjct: 98 QEFIDTVKEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAIDRFEKARGHK 157
Query: 107 APNFHFMEQL 116
++++ L
Sbjct: 158 IERQNYVQDL 167
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa, MSGPP,
unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Length = 167
Score = 46.5 bits (110), Expect = 2e-07
Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 56 EEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRA--RKSNIAPNFHFM 113
E+ + VHC+AG+ R+ + L+ +S DA L+R + + H++
Sbjct: 103 EDPSVPPPTIGVHCVAGLGRAPILVALALVEYGNVSALDAIALIREKRKGAINQTQMHWI 162
Query: 114 EQLNSFEK 121
+ +++
Sbjct: 163 TK---YKR 167
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine
phosphatase IVA1...; structural genomics, NYSGXRC,
unknown function, PSI; 1.90A {Homo sapiens} SCOP:
c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Length = 159
Score = 39.2 bits (91), Expect = 7e-05
Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 52 CTFTEEARSQDTG--VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRAR 102
+ + ++ G + VHC+AG+ R+ + L+ + DA +R +
Sbjct: 84 LSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQFIRQK 135
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual
specific phosphatase, COMP with peptide, hydrolase;
2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Length = 189
Score = 39.7 bits (92), Expect = 7e-05
Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 40 GWPKGSKFNHSHCTFTEEARSQDTG--VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFT 97
G P ++ + + ++ G + VHC+AG+ R+ + L+ + DA
Sbjct: 93 GAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQ 151
Query: 98 LVRAR 102
+R +
Sbjct: 152 FIRQK 156
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 39.7 bits (92), Expect = 8e-05
Identities = 13/74 (17%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALR-LSLNDAFTLVRARKSNIAP-N 109
L+H G+ RS + L+ +S A +R + + A
Sbjct: 123 MEELTTCLKNYRKTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRGSGAIQT 182
Query: 110 FHFMEQLNSFEKEL 123
L+ F +L
Sbjct: 183 IKQYNYLHEFRDKL 196
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein
tyrosine phosphatase, inositol phosphate, I phosphatase;
HET: IHP; 1.60A {Selenomonas ruminantium} PDB: 1u24_A
1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A
3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Length = 314
Score = 39.3 bits (91), Expect = 1e-04
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 57 EARSQDTGVLVHCLAGVSRSVTITVAYLM-SALRLSLNDAFTLVRARKSNIAPNFHFMEQ 115
QD + H AGV R+ V M +SL D R+ I ++
Sbjct: 208 RTLPQDAWLHFHSEAGVGRTTAFMVMTDMLKNPSVSLKDIL----YRQHEIGGFYYGEFP 263
Query: 116 LNSFEKELMEARLQQQ 131
+ + +K+ + + ++
Sbjct: 264 IKTKDKDSWKTKYYRE 279
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol
phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Length = 629
Score = 35.9 bits (82), Expect = 0.002
Identities = 10/71 (14%), Positives = 28/71 (39%)
Query: 57 EARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQL 116
++ +D + HC AG+ R+ V + + ++ + R + I ++
Sbjct: 227 KSLPKDAWLHYHCYAGMGRTTIFMVMHDILKNAKDVSFDDIIQRQKLIGIVDLSEIPDKK 286
Query: 117 NSFEKELMEAR 127
++ ++ R
Sbjct: 287 KNYGRKAYIER 297
Score = 34.8 bits (79), Expect = 0.005
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 60 SQDTGVLVHCLAGVSRSVTITVAYLM 85
+ + HC AG R+ Y M
Sbjct: 528 PANAWLHFHCQAGAGRTTAYMAMYDM 553
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2
domain, hydrolase; 2.20A {Bos taurus}
Length = 361
Score = 35.3 bits (80), Expect = 0.003
Identities = 18/114 (15%), Positives = 32/114 (28%), Gaps = 3/114 (2%)
Query: 22 KYQADLFSHTCQVFLIVCGWPKGSKFNHSHCTFTEEARSQDTG--VLVHCLAGVSRSVTI 79
Y+ F + C Q+ +VHCL G + S +
Sbjct: 73 SYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSIL 132
Query: 80 TVAYLM-SALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKELMEARLQQQE 132
A + L + A L+ A++ I + L L + +
Sbjct: 133 VGAMFIFCNLYSTPGPAVRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHF 186
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 33.1 bits (75), Expect = 0.018
Identities = 7/37 (18%), Positives = 10/37 (27%), Gaps = 17/37 (45%)
Query: 66 LVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRAR 102
L LA V +S+ +V R
Sbjct: 1770 LA-SLADV----------------MSIESLVEVVFYR 1789
Score = 26.9 bits (59), Expect = 2.5
Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 21/93 (22%)
Query: 6 IRTYLSGLPDSVCVLIKYQADLFSHTCQVFLIVCGWPKGSKFNHSHC-TFTEEARSQDTG 64
+R + + + I + W ++F +H F S G
Sbjct: 468 LRVLSGSISERIVDCI------IRLPVK-------WETTTQFKATHILDFGPGGAS-GLG 513
Query: 65 VLVHCLA-GVSRSVTITVAYLMSALRLSLNDAF 96
VL H G V + VA L ++ +D +
Sbjct: 514 VLTHRNKDG--TGVRVIVA---GTLDINPDDDY 541
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 30.8 bits (70), Expect = 0.12
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 56 EEARSQDTGVLVHCLAGVSRSVT-ITVAYLMSALR 89
EEA ++D +VH G + + L L
Sbjct: 513 EEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLE 547
Score = 28.5 bits (64), Expect = 0.60
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
AR +TG VLVHC AGV R+ T I + ++ ++
Sbjct: 222 AARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIK 256
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol,
hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1
c.45.1.1
Length = 324
Score = 30.2 bits (67), Expect = 0.16
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 52 CTFTEEARSQDTG--VLVHCLAGVSRSVTITVAYLM 85
C ++ S+D +HC AG R+ + AYL+
Sbjct: 99 CEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLL 134
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4;
1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A*
3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Length = 339
Score = 30.0 bits (66), Expect = 0.19
Identities = 6/28 (21%), Positives = 13/28 (46%)
Query: 58 ARSQDTGVLVHCLAGVSRSVTITVAYLM 85
D + +H G R+ T+ ++L+
Sbjct: 115 TSDPDHVIAIHSKGGKGRTGTLVSSWLL 142
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase,
phosphate ION, colorectal cancer alternative splicing,
coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP:
c.45.1.2
Length = 315
Score = 30.0 bits (68), Expect = 0.20
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 53 TFTEEAR-SQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
TF R +G ++ HC AG+ RS T I + ++ +
Sbjct: 228 TFISYMRHIHRSGPIITHCSAGIGRSGTLICIDVVLGLIS 267
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine
phosphatase, glepp1, PTPU2, structural genom structural
genomics consortium, SGC; 2.15A {Homo sapiens} PDB:
2g59_A 2pi7_A
Length = 295
Score = 29.9 bits (68), Expect = 0.22
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ ++ G +++HC AGV R+ T I + L+ +R
Sbjct: 210 QQATKSKGPMIIHCSAGVGRTGTFIALDRLLQHIR 244
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase
activating protein, 4-helix bundle, disorder, signaling
protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1
c.45.1.2 PDB: 1g4u_S
Length = 383
Score = 29.9 bits (67), Expect = 0.24
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 46 KFNHSHCTFTEEARSQDTG-VLVHCLAGVSRSVTITVAYLM 85
+ +S+ S D ++HCL GV R+ T+ A ++
Sbjct: 297 RVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVL 337
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14,
hydrolase; 1.65A {Homo sapiens}
Length = 325
Score = 29.2 bits (66), Expect = 0.34
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 49 HSHCTFTEEARSQDTG-VLVHCLAGVSRS-VTITVAYLMSALR 89
H E ++VHC AGV R+ V I ++ L
Sbjct: 238 RRHTNSMLEGTKNRHPPIVVHCSAGVGRTGVLILSELMIYCLE 280
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 29.3 bits (66), Expect = 0.35
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
G ++VHC AGV R+ T I + +M+ +
Sbjct: 217 TLNPVHAGPIVVHCSAGVGRTGTFIVIDAMMAMMH 251
Score = 28.9 bits (65), Expect = 0.50
Identities = 8/26 (30%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 65 VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ VHC AG R+ T I ++ ++ ++
Sbjct: 521 ITVHCSAGAGRTGTFIALSNILERVK 546
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase,
RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR;
2.90A {Homo sapiens} PDB: 1ygu_A*
Length = 610
Score = 29.3 bits (66), Expect = 0.40
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ +G ++VH AGV R+ T I + ++ L
Sbjct: 217 AFSNFFSGPIVVHSSAGVGRTGTYIGIDAMLEGLE 251
Score = 28.9 bits (65), Expect = 0.42
Identities = 6/42 (14%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 50 SHCTFTEEARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
+E + + +L+HC G ++ + L+ +
Sbjct: 526 PQKNSSEGNKHHKSTPLLIHCRDGSQQTGIFCALLNLLESAE 567
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 29.2 bits (66), Expect = 0.40
Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 65 VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ VHC AGV R+ IT++ ++ +R
Sbjct: 503 ITVHCSAGVGRTGVFITLSIVLERMR 528
Score = 28.9 bits (65), Expect = 0.54
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
D G ++VHC AGV R+ I + ++ ++
Sbjct: 203 ACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMK 237
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal
transduction, glycoprotein, phosphorylation, signal;
2.25A {Mus musculus} SCOP: c.45.1.2
Length = 302
Score = 28.7 bits (65), Expect = 0.46
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
Q G ++VHC AGV R+ T + + ++ +
Sbjct: 219 ACNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMH 253
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine
phosphatase, lymphoid phosphatase, PEP, LYP, struct
genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A
2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Length = 309
Score = 28.8 bits (65), Expect = 0.48
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ D+ + +HC AG R+ + Y L+
Sbjct: 214 CYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLK 248
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP,
tyrosine phosphatase, MEG-1, structural genomics
structural genomics consortium, SGC; 2.45A {Homo
sapiens}
Length = 320
Score = 28.8 bits (65), Expect = 0.50
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
R+ V+VHC AG+ R+ IT+ M +
Sbjct: 231 NKRAGKEEPVVVHCSAGIGRTGVLITMETAMCLIE 265
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine
phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Length = 306
Score = 28.4 bits (64), Expect = 0.58
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Query: 53 TFTEEAR-SQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ T +LVHC AG+ R+ T I + +
Sbjct: 211 ELLSVIKNCVTTSPILVHCSAGIGRTGTLIGAYAALLHIE 250
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG
for eukaryotic structural genomics, phosphoprote
phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1
PDB: 2q47_A
Length = 151
Score = 28.2 bits (62), Expect = 0.66
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 65 VLVHCLAGVSRSVTITVAYLMSALRLSLNDAF 96
VL+HC G R+ + V L + L F
Sbjct: 95 VLIHCKRGKHRTGCL-VGCLRKLQKWCLTSIF 125
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU
genomics, structural genomics consortium, SGC,
hydrolase; 1.54A {Homo sapiens}
Length = 287
Score = 28.4 bits (64), Expect = 0.67
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 53 TFTEEARS--QDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
F RS D+ VLVHC AG+ R+ +T+ M
Sbjct: 197 EFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTE 237
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis,
signal transduction, developm protein, hydrolase; 2.40A
{Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Length = 307
Score = 28.4 bits (64), Expect = 0.72
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ + ++VHC AGV RS T IT+ ++ +
Sbjct: 229 DRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQIN 263
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine
phosphatase, human, structural genomics, structural
genomics consortium, SGC; 1.50A {Homo sapiens}
Length = 303
Score = 28.0 bits (63), Expect = 0.77
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ + VHC AG R+ TV Y+ L
Sbjct: 220 RLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLL 254
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein
tyrosine phosphatase precursor, phosph structural
genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Length = 301
Score = 28.0 bits (63), Expect = 0.89
Identities = 7/34 (20%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSAL 88
+ + ++VHC G R+ T I + +++ +
Sbjct: 218 KCYRGRSCPIIVHCSDGAGRTGTYILIDMVLNRM 251
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine
phosphatase, human, structural GE structural genomics
consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo
sapiens} PDB: 1rpm_A 2c7s_A
Length = 286
Score = 27.9 bits (63), Expect = 0.90
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ G ++VHC AG R+ I + ++
Sbjct: 206 FLNPPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAE 240
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor
phosphatase, human, structural GENO structural genomics
consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB:
3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A*
3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A*
3qcn_A
Length = 320
Score = 28.0 bits (63), Expect = 0.96
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
AR +TG VLVHC AGV R+ T I + ++ ++
Sbjct: 240 AARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIK 274
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine
phosphatase, WPD-loop, sulfamic acid, inhibitor, drug
design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A
2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A*
2i4h_A* 2i5x_A* 2ahs_A
Length = 291
Score = 27.6 bits (62), Expect = 1.2
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
RS G +VHC AGV R+ T I + ++ L
Sbjct: 213 NRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLD 246
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human
tyrosine phosphatase catalytic domain, LC-PTP,
hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A
2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A*
3d42_A* 2a3k_A
Length = 309
Score = 27.3 bits (61), Expect = 1.4
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ G ++VHC AG+ R+ I L+
Sbjct: 228 ETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLK 261
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R;
PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase;
1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Length = 297
Score = 27.2 bits (61), Expect = 1.7
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
S+ G V+VHC AG+ R+ I + L+
Sbjct: 217 LASEGRGPVVVHCSAGIGRTGCFIATSIGCQQLK 250
>1uli_A Biphenyl dioxygenase large subunit; alpha3 BETA3 hetero hexamer,
oxidoreductase; 2.20A {Rhodococcus SP} SCOP: b.33.1.2
d.129.3.3 PDB: 1ulj_A* 3en1_A* 3eqq_A
Length = 460
Score = 27.2 bits (60), Expect = 1.8
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 72 GVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSF 119
V+ T A ++ RL + + A+ I P F+ +N+
Sbjct: 282 KVTEYWTQGPAAEKASERLGSTERGQQLMAQHMTIFPTCSFLPGINTI 329
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase,
STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB:
2bij_A 2bv5_A*
Length = 305
Score = 26.9 bits (60), Expect = 1.8
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 57 EARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ ++VH AG+ R+ I + LR
Sbjct: 225 QQEGPHCAPIIVHSSAGIGRTGCFIATSICCQQLR 259
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase,
phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Length = 253
Score = 26.8 bits (60), Expect = 1.9
Identities = 7/26 (26%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 65 VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ VHC AG R+ T ++ ++ ++
Sbjct: 179 ITVHCSAGAGRTGTFCALSTVLERVK 204
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A
{Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Length = 342
Score = 26.9 bits (60), Expect = 2.4
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ +LVHC AGV R+ T I + L+ +
Sbjct: 232 KQIPPESPILVHCSAGVGRTGTFIAIDRLIYQIE 265
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo
sapiens} SCOP: c.45.1.2
Length = 314
Score = 26.9 bits (60), Expect = 2.4
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ + D G ++HC AG+ RS T V + +
Sbjct: 204 SLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLME 237
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism,
phosphorylation, endoplasmic reticulum, oxidation,
hydrolase, acetylation; 1.5A {Homo sapiens} SCOP:
c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A
2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A*
2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A*
2zn7_A* ...
Length = 304
Score = 26.1 bits (58), Expect = 3.4
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
+ S + G V+VHC AG+ RS T + +
Sbjct: 209 SLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMD 242
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase,
substrate specificity, residue shift, signaling protein;
HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB:
1gwz_A
Length = 284
Score = 26.1 bits (58), Expect = 3.7
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
G ++VH AG+ R+ T I + LM +
Sbjct: 199 ESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENIS 232
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11,
tyrosine phosphatase, structural genomics, STR genomics
consortium, SGC, deafness; 1.60A {Homo sapiens} PDB:
3jrl_A* 3mow_A* 3o5x_A*
Length = 316
Score = 26.1 bits (58), Expect = 3.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
D G V+VHC AG+ R+ T I + L+ +R
Sbjct: 234 ESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIR 267
>2pa5_A Tyrosine-protein phosphatase non-receptor type 9; protein tyrosine
phosphatase, MEG2, PTPN9, structural genomi structural
genomics consortium, SGC; 1.60A {Homo sapiens}
Length = 314
Score = 26.1 bits (58), Expect = 4.1
Identities = 8/26 (30%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 65 VLVHCLAGVSRSVT-ITVAYLMSALR 89
++VHC AG+ R+ T ++ ++ L
Sbjct: 236 IVVHCSAGIGRTGTFCSLDICLAQLE 261
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 26.0 bits (57), Expect = 4.1
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
D G V+VHC AG+ R+ T I + L+ +R
Sbjct: 447 ESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIR 480
>3czq_A Putative polyphosphate kinase 2; structural genomics, APC6299,
PSI-2, structure initiative; HET: MSE GOL; 2.23A
{Sinorhizobium meliloti}
Length = 304
Score = 25.8 bits (57), Expect = 4.8
Identities = 3/16 (18%), Positives = 8/16 (50%)
Query: 111 HFMEQLNSFEKELMEA 126
F+++ FE+ +
Sbjct: 173 QFLKEAPRFEEMIANE 188
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine
phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo
sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 26.0 bits (57), Expect = 5.0
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 58 ARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 89
G ++VHC AG+ R+ T I + LM +
Sbjct: 441 ESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENIS 474
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A
{Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A*
1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A*
1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A*
1pa9_A* 1yts_A
Length = 306
Score = 25.9 bits (57), Expect = 5.2
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 65 VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVR 100
++H AGV R+ + A M+ R S +V
Sbjct: 237 PVIHSRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVS 272
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 25.7 bits (56), Expect = 5.4
Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 65 VLVHCLAGVSRSVT-ITVAYLMSALR 89
++VH AG+ R+ T I + LM +
Sbjct: 449 IIVHSSAGIGRTGTIIVIDMLMENIS 474
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint
center for structural genomics, JCSG; HET: MSE; 1.40A
{Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Length = 157
Score = 24.9 bits (54), Expect = 6.9
Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
Query: 65 VLVHCLAGVSRSVTITVAYLM 85
VLVHCLA R+ Y +
Sbjct: 100 VLVHCLAN-YRASAFAYLYQL 119
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase;
HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP:
c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A*
1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A*
1d7r_A* 1d7v_A* 1z3z_A*
Length = 433
Score = 25.2 bits (56), Expect = 7.4
Identities = 4/16 (25%), Positives = 4/16 (25%)
Query: 21 IKYQADLFSHTCQVFL 36
I A H L
Sbjct: 68 IGEYAGKLDHLFSEML 83
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein,
metal-binding, metalloprotease, protease, hydrolase,
adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB:
2yd0_A* 3qnf_A* 3mdj_A*
Length = 897
Score = 25.5 bits (56), Expect = 7.7
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Query: 92 LNDAFTLVRARKSNIAPNFHFMEQLNSFEKE 122
+N+AF LV K +I ++ + E
Sbjct: 595 INNAFQLVSIGKLSIE---KALDLSLYLKHE 622
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.325 0.134 0.402
Gapped
Lambda K H
0.267 0.0732 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,938,837
Number of extensions: 100337
Number of successful extensions: 312
Number of sequences better than 10.0: 1
Number of HSP's gapped: 306
Number of HSP's successfully gapped: 87
Length of query: 132
Length of database: 6,701,793
Length adjustment: 83
Effective length of query: 49
Effective length of database: 4,384,350
Effective search space: 214833150
Effective search space used: 214833150
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 52 (23.8 bits)