RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy18175
(132 letters)
>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR
{Human (Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 79.0 bits (194), Expect = 4e-20
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Query: 23 YQADLFSHTCQVFLIVCGWPKGSKFNHSHCTFTEEARSQDTGVLVHCLAGVSRSVTITVA 82
Y+ ++ + + F + + ++ VLVHC G SRS T+ +A
Sbjct: 71 YKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIA 130
Query: 83 YLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKELMEAR 127
YLM ++ + A ++VR + I PN F+ QL L +
Sbjct: 131 YLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQLCQLNDRLAKEG 174
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1
[TaxId: 9606]}
Length = 145
Score = 76.7 bits (188), Expect = 1e-19
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFH 111
F + ++ VLVH AG+SRS TI +AYLM + R+ L++AF V+ R+ I+PNF
Sbjct: 71 IGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFS 130
Query: 112 FMEQLNSFEKELM 124
FM QL FE +++
Sbjct: 131 FMGQLLQFETQVL 143
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1
(mkp3) [TaxId: 9606]}
Length = 144
Score = 74.8 bits (183), Expect = 7e-19
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Query: 36 LIVCGWPKGSKFNHSH--CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLN 93
+ + + +F +EAR ++ GVLVH LAG+SRSVT+TVAYLM L LS+N
Sbjct: 55 IPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMN 114
Query: 94 DAFTLVRARKSNIAPNFHFMEQLNSFEKEL 123
DA+ +V+ +KSNI+PNF+FM QL FE+ L
Sbjct: 115 DAYDIVKMKKSNISPNFNFMGQLLDFERTL 144
>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 194
Score = 72.4 bits (177), Expect = 2e-17
Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 52 CTFTEEARSQDTG--VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPN 109
E + + VHC G +R+ + A+L+ + S+ A +
Sbjct: 103 IRLCERFNERSPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIYK 162
Query: 110 FHFMEQLNSFEKELMEAR 127
++++L ++ EA
Sbjct: 163 GDYLKELFRRYGDIEEAP 180
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 182
Score = 58.9 bits (142), Expect = 2e-12
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 52 CTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSN--IAPN 109
F + + + + VH AG+ R+ T+ Y+M R++ + VR + I P
Sbjct: 99 KEFLDICENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQ 158
Query: 110 FHFMEQLNS---FEKELMEARLQ 129
F+ + E + +L+
Sbjct: 159 QQFLVMKQTNLWLEGDYFRQKLK 181
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 176
Score = 48.5 bits (115), Expect = 1e-08
Identities = 16/91 (17%), Positives = 24/91 (26%), Gaps = 2/91 (2%)
Query: 35 FLIVCGWPKGSKFNHSHCTFTEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALR-LSLN 93
I G L+H G+ RS + L+ +S
Sbjct: 82 HPIADGGTPDIASCCEIMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLLLYLSDTISPE 141
Query: 94 DAFTLVRA-RKSNIAPNFHFMEQLNSFEKEL 123
A +R R S L+ F +L
Sbjct: 142 QAIDSLRDLRGSGAIQTIKQYNYLHEFRDKL 172
>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten
(Pten tumor suppressor), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 174
Score = 42.3 bits (99), Expect = 3e-06
Identities = 17/97 (17%), Positives = 30/97 (30%), Gaps = 3/97 (3%)
Query: 23 YQADLFSHTCQVFLIVCGWPKGSKFNHSHCTFTEEARSQDTG--VLVHCLAGVSRSVTIT 80
Y F+ + P + C ++ S+D +HC AG R+ +
Sbjct: 63 YDTAKFNCRVAQYPFEDHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMI 122
Query: 81 VAYLM-SALRLSLNDAFTLVRARKSNIAPNFHFMEQL 116
AYL+ L +A ++ Q
Sbjct: 123 CAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQR 159
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human
(Homo sapiens), pr-1 [TaxId: 9606]}
Length = 152
Score = 38.5 bits (89), Expect = 5e-05
Identities = 14/98 (14%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Query: 30 HTCQVFLIVCGWPKGSKFNHSHCTFTEEARSQDTG--VLVHCLAGVSRSVTITVAYLMSA 87
+ G P ++ + + ++ G + VHC+AG+ R+ + L+
Sbjct: 55 IHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIE- 113
Query: 88 LRLSLNDAFTLVRARKSN--IAPNFHFMEQLNSFEKEL 123
+ DA +R ++ + ++E+ + ++
Sbjct: 114 GGMKYEDAVQFIRQKRRGAFNSKQLLYLEK---YRPKM 148
>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate
phosphohydrolase (phytase) PhyA {Selenomonas ruminantium
[TaxId: 971]}
Length = 313
Score = 33.9 bits (77), Expect = 0.003
Identities = 15/68 (22%), Positives = 20/68 (29%), Gaps = 7/68 (10%)
Query: 40 GWPKGSKFNHSHCTFTEEARSQDTG--VLVHCLAGVSRSVTITVAYLM-SALRLSLNDAF 96
WP + F R+ + HC AGV R+ V M +SL D
Sbjct: 192 VWPTPENIDR----FLAFYRTLPQDAWLHFHCEAGVGRTTAFMVMTDMLKNPSVSLKDIL 247
Query: 97 TLVRARKS 104
Sbjct: 248 YRQHEIGG 255
>d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo
sapiens), shp-2 [TaxId: 9606]}
Length = 307
Score = 25.6 bits (55), Expect = 2.3
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 65 VLVHCLAGVSRSVT-ITVAYLMSALR 89
V+VHC AG+ R+ T I + L+ +R
Sbjct: 237 VVVHCSAGIGRTGTFIVIDILIDIIR 262
>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 272
Score = 25.2 bits (54), Expect = 3.1
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 57 EARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLND 94
+ VL HC AG R+ VA ++ A+ L +
Sbjct: 145 TLLAAGRPVLTHCFAGKDRT-GFVVALVLEAVGLDRDV 181
>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic
domain {Yersinia enterocolitica [TaxId: 630]}
Length = 283
Score = 24.7 bits (53), Expect = 4.6
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 55 TEEARSQDTGVLVHCLAGVSRSVTITVAYLM 85
+ A ++H AGV R+ + A M
Sbjct: 204 SAVADDSKLRPVIHSRAGVGRTAQLIGAMCM 234
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.325 0.134 0.402
Gapped
Lambda K H
0.267 0.0471 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 465,258
Number of extensions: 18548
Number of successful extensions: 72
Number of sequences better than 10.0: 1
Number of HSP's gapped: 70
Number of HSP's successfully gapped: 13
Length of query: 132
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 56
Effective length of database: 1,364,116
Effective search space: 76390496
Effective search space used: 76390496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 48 (22.9 bits)