Query psy18177
Match_columns 220
No_of_seqs 148 out of 648
Neff 6.2
Searched_HMMs 46136
Date Sat Aug 17 00:38:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18177.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18177hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3916|consensus 100.0 6.9E-62 1.5E-66 434.1 13.0 185 35-220 119-308 (372)
2 cd00899 b4GalT Beta-4-Galactos 100.0 3E-52 6.4E-57 357.7 15.1 157 63-220 1-159 (219)
3 KOG3917|consensus 100.0 1.5E-43 3.2E-48 302.3 10.4 157 62-220 72-229 (310)
4 PF13733 Glyco_transf_7N: N-te 100.0 2.6E-34 5.7E-39 229.2 8.3 114 39-152 19-135 (136)
5 PF10111 Glyco_tranf_2_2: Glyc 99.9 8.7E-24 1.9E-28 186.5 9.1 147 67-219 1-215 (281)
6 PF02709 Glyco_transf_7C: N-te 99.8 2.4E-20 5.2E-25 136.6 4.5 65 156-220 1-67 (78)
7 KOG3588|consensus 99.8 2.4E-19 5.3E-24 162.8 8.2 150 65-219 230-430 (494)
8 cd06420 GT2_Chondriotin_Pol_N 99.7 3.7E-17 7.9E-22 131.9 8.8 143 68-218 1-172 (182)
9 PF05679 CHGN: Chondroitin N-a 99.7 1.5E-16 3.2E-21 151.6 10.6 157 58-218 241-459 (499)
10 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 9.5E-16 2.1E-20 135.2 12.0 147 67-218 1-217 (299)
11 cd04184 GT2_RfbC_Mx_like Myxoc 99.5 6E-14 1.3E-18 114.9 9.9 145 65-219 2-194 (202)
12 cd04186 GT_2_like_c Subfamily 99.5 9.3E-14 2E-18 109.0 8.9 135 68-219 1-158 (166)
13 cd02520 Glucosylceramide_synth 99.5 7.1E-14 1.5E-18 115.7 6.5 140 65-219 2-170 (196)
14 cd02522 GT_2_like_a GT_2_like_ 99.4 1E-12 2.2E-17 109.0 11.0 141 66-217 1-178 (221)
15 cd04185 GT_2_like_b Subfamily 99.4 6.9E-13 1.5E-17 109.2 8.0 137 68-215 1-163 (202)
16 cd06437 CESA_CaSu_A2 Cellulose 99.4 8.3E-13 1.8E-17 111.5 8.7 142 65-218 2-205 (232)
17 cd02525 Succinoglycan_BP_ExoA 99.4 4.1E-12 8.9E-17 106.6 12.0 145 65-219 1-201 (249)
18 TIGR03469 HonB hopene-associat 99.4 3.2E-12 6.9E-17 117.6 11.8 150 62-216 38-252 (384)
19 cd06427 CESA_like_2 CESA_like_ 99.3 1E-11 2.2E-16 105.9 11.0 144 64-218 1-204 (241)
20 cd02526 GT2_RfbF_like RfbF is 99.3 5.3E-12 1.2E-16 106.0 9.1 143 68-218 1-196 (237)
21 PRK11204 N-glycosyltransferase 99.3 2.6E-11 5.6E-16 111.8 13.5 148 60-218 50-252 (420)
22 cd06913 beta3GnTL1_like Beta 1 99.3 6.6E-12 1.4E-16 105.1 8.5 142 68-218 1-201 (219)
23 cd04195 GT2_AmsE_like GT2_AmsE 99.3 1.8E-11 3.9E-16 100.3 10.8 142 67-219 1-194 (201)
24 cd06433 GT_2_WfgS_like WfgS an 99.3 1.5E-11 3.2E-16 99.2 10.1 140 67-216 1-184 (202)
25 cd06421 CESA_CelA_like CESA_Ce 99.3 3.3E-11 7E-16 100.6 11.6 143 65-218 2-203 (234)
26 PRK14583 hmsR N-glycosyltransf 99.3 6.7E-11 1.5E-15 110.8 14.8 146 62-218 73-273 (444)
27 cd06435 CESA_NdvC_like NdvC_li 99.3 3.3E-11 7.1E-16 101.5 10.7 143 67-219 1-202 (236)
28 PF13641 Glyco_tranf_2_3: Glyc 99.3 1.7E-11 3.7E-16 102.5 8.3 143 65-218 2-202 (228)
29 cd04192 GT_2_like_e Subfamily 99.3 4.6E-11 1E-15 99.0 10.3 140 68-216 1-199 (229)
30 TIGR03472 HpnI hopanoid biosyn 99.2 1.1E-10 2.5E-15 106.8 11.4 147 63-218 40-245 (373)
31 cd06439 CESA_like_1 CESA_like_ 99.2 1.8E-10 3.9E-15 97.8 9.9 150 56-219 21-222 (251)
32 TIGR03030 CelA cellulose synth 99.1 3.9E-10 8.4E-15 111.8 12.2 148 59-217 126-349 (713)
33 COG1216 Predicted glycosyltran 99.1 9.1E-10 2E-14 98.1 10.6 148 63-219 2-213 (305)
34 PRK10063 putative glycosyl tra 99.0 3.2E-09 6.9E-14 92.4 12.8 148 64-218 1-188 (248)
35 PRK11498 bcsA cellulose syntha 99.0 2.6E-09 5.5E-14 107.7 13.8 145 61-216 257-459 (852)
36 TIGR03111 glyc2_xrt_Gpos1 puta 99.0 1.5E-09 3.2E-14 101.7 11.2 146 61-217 46-258 (439)
37 PRK10018 putative glycosyl tra 99.0 3.5E-09 7.7E-14 94.1 12.9 141 63-214 4-194 (279)
38 PLN02726 dolichyl-phosphate be 99.0 1.4E-09 3E-14 93.1 9.3 150 62-218 7-210 (243)
39 cd06434 GT2_HAS Hyaluronan syn 99.0 2E-09 4.4E-14 90.1 10.0 143 65-217 1-204 (235)
40 COG4092 Predicted glycosyltran 99.0 1.4E-09 3.1E-14 96.0 8.9 115 97-211 62-216 (346)
41 cd06442 DPM1_like DPM1_like re 99.0 2E-09 4.3E-14 89.4 8.7 142 68-218 1-195 (224)
42 cd00761 Glyco_tranf_GTA_type G 99.0 6.5E-09 1.4E-13 78.6 10.0 127 68-215 1-154 (156)
43 TIGR01556 rhamnosyltran L-rham 98.9 7.5E-09 1.6E-13 90.3 9.9 140 72-219 2-194 (281)
44 cd06423 CESA_like CESA_like is 98.9 4.5E-09 9.7E-14 81.3 7.4 123 68-201 1-180 (180)
45 cd04196 GT_2_like_d Subfamily 98.9 1.6E-08 3.4E-13 82.9 9.9 136 67-212 1-190 (214)
46 cd04187 DPM1_like_bac Bacteria 98.8 2.1E-08 4.6E-13 81.2 7.0 124 68-195 1-170 (181)
47 PRK14716 bacteriophage N4 adso 98.7 2E-07 4.4E-12 89.4 12.4 149 63-217 65-280 (504)
48 cd04188 DPG_synthase DPG_synth 98.7 8.8E-08 1.9E-12 79.6 8.7 144 68-217 1-199 (211)
49 cd04191 Glucan_BSP_ModH Glucan 98.7 7.5E-08 1.6E-12 84.5 8.7 151 66-218 1-223 (254)
50 COG1215 Glycosyltransferases, 98.6 2.4E-07 5.3E-12 84.9 11.1 145 63-218 53-257 (439)
51 PF00535 Glycos_transf_2: Glyc 98.5 1.9E-07 4.2E-12 72.3 6.5 72 67-145 1-95 (169)
52 cd04179 DPM_DPG-synthase_like 98.5 1.9E-07 4E-12 75.1 6.1 131 68-207 1-184 (185)
53 PRK10073 putative glycosyl tra 98.5 3.5E-07 7.5E-12 82.9 8.2 75 63-145 5-102 (328)
54 PRK10714 undecaprenyl phosphat 98.4 7.2E-07 1.6E-11 80.8 7.8 78 63-144 5-106 (325)
55 PRK13915 putative glucosyl-3-p 98.3 1.3E-06 2.9E-11 78.6 7.3 143 61-213 28-231 (306)
56 COG0463 WcaA Glycosyltransfera 98.3 2.4E-06 5.3E-11 65.2 7.1 74 63-145 2-99 (291)
57 PTZ00260 dolichyl-phosphate be 98.3 1E-05 2.3E-10 73.5 11.6 151 60-217 66-283 (333)
58 cd04190 Chitin_synth_C C-termi 98.2 2.7E-06 5.8E-11 73.2 6.4 141 68-217 1-211 (244)
59 PRK11234 nfrB bacteriophage N4 98.1 2.4E-05 5.2E-10 78.2 12.2 150 62-217 61-277 (727)
60 cd06438 EpsO_like EpsO protein 98.1 6.2E-06 1.3E-10 67.2 6.7 74 68-145 1-98 (183)
61 PRK05454 glucosyltransferase M 98.1 4.6E-05 1E-09 75.8 13.4 157 58-218 118-348 (691)
62 KOG3736|consensus 98.1 8.7E-07 1.9E-11 86.0 0.9 47 170-216 313-359 (578)
63 cd02514 GT13_GLCNAC-TI GT13_GL 98.0 2.9E-05 6.4E-10 71.1 8.4 142 66-219 2-202 (334)
64 cd02511 Beta4Glucosyltransfera 98.0 1.8E-05 3.8E-10 67.3 6.4 71 65-145 1-88 (229)
65 PRK15489 nfrB bacteriophage N4 97.9 0.00011 2.5E-09 73.1 11.9 148 62-216 69-284 (703)
66 cd06436 GlcNAc-1-P_transferase 97.9 3.9E-05 8.4E-10 63.3 6.4 74 68-145 1-106 (191)
67 PF13712 Glyco_tranf_2_5: Glyc 97.5 0.00036 7.8E-09 60.0 7.6 138 66-216 1-188 (217)
68 KOG3738|consensus 97.2 0.00036 7.9E-09 65.3 4.1 148 60-215 120-336 (559)
69 KOG2978|consensus 97.2 0.00059 1.3E-08 58.2 4.7 153 63-216 2-203 (238)
70 KOG3737|consensus 96.9 0.00076 1.7E-08 63.1 3.7 49 170-218 331-379 (603)
71 PF13506 Glyco_transf_21: Glyc 96.6 0.0034 7.3E-08 52.1 4.6 90 127-219 30-147 (175)
72 KOG2977|consensus 96.3 0.046 1E-06 49.4 10.7 168 42-215 40-278 (323)
73 PF13632 Glyco_trans_2_3: Glyc 96.3 0.0043 9.4E-08 50.6 3.8 47 171-219 71-117 (193)
74 PF03214 RGP: Reversibly glyco 95.2 0.052 1.1E-06 49.8 6.3 73 63-145 7-108 (348)
75 PLN03180 reversibly glycosylat 93.6 0.21 4.5E-06 46.0 6.6 75 62-144 9-109 (346)
76 PF13896 Glyco_transf_49: Glyc 86.0 0.49 1.1E-05 43.0 2.1 32 110-145 113-144 (317)
77 PF03071 GNT-I: GNT-I family; 73.5 6.1 0.00013 37.8 5.0 85 63-148 92-211 (434)
78 COG2943 MdoH Membrane glycosyl 72.4 38 0.00082 33.7 10.0 80 62-145 142-257 (736)
79 PF03452 Anp1: Anp1; InterPro 69.7 29 0.00064 31.1 8.2 88 56-144 17-158 (269)
80 KOG2547|consensus 65.6 27 0.00058 33.1 7.3 144 62-214 83-285 (431)
81 PF09258 Glyco_transf_64: Glyc 65.3 30 0.00065 30.3 7.3 73 67-144 2-91 (247)
82 PLN02893 Cellulose synthase-li 64.9 20 0.00044 36.5 6.9 34 110-143 280-313 (734)
83 COG2115 XylA Xylose isomerase 61.1 9.9 0.00021 35.4 3.6 69 76-145 40-112 (438)
84 PF13087 AAA_12: AAA domain; P 54.0 11 0.00023 30.7 2.4 70 63-136 112-198 (200)
85 PF11735 CAP59_mtransfer: Cryp 49.3 69 0.0015 28.2 6.8 78 65-143 34-126 (241)
86 PRK12465 xylose isomerase; Pro 44.3 13 0.00028 35.5 1.5 69 76-145 47-119 (445)
87 PF13704 Glyco_tranf_2_4: Glyc 41.3 1.3E+02 0.0028 21.4 6.6 14 127-140 70-83 (97)
88 KOG3765|consensus 41.2 15 0.00034 34.5 1.6 28 114-145 181-208 (386)
89 KOG2943|consensus 40.6 11 0.00023 33.7 0.4 35 174-208 39-83 (299)
90 cd06438 EpsO_like EpsO protein 38.8 14 0.0003 29.6 0.7 29 172-204 155-183 (183)
91 PLN02923 xylose isomerase 38.0 18 0.00038 34.8 1.4 20 126-145 134-153 (478)
92 PRK14755 transcriptional regul 33.8 27 0.00059 19.8 1.2 16 70-85 2-18 (26)
93 TIGR02630 xylose_isom_A xylose 33.3 21 0.00045 34.1 1.1 19 127-145 90-108 (434)
94 PF09488 Osmo_MPGsynth: Mannos 31.8 2.1E+02 0.0046 27.0 7.3 25 115-140 147-171 (381)
95 PTZ00441 sporozoite surface pr 29.8 1.9E+02 0.0041 28.8 7.1 71 14-93 2-78 (576)
96 PRK05474 xylose isomerase; Pro 29.5 27 0.00058 33.5 1.1 19 127-145 91-109 (437)
97 PLN03153 hypothetical protein; 28.4 1.5E+02 0.0033 29.2 6.1 106 114-220 192-314 (537)
98 KOG2791|consensus 28.4 1.4E+02 0.003 28.2 5.5 40 61-103 114-153 (455)
99 PF04724 Glyco_transf_17: Glyc 27.1 5.1E+02 0.011 24.0 9.5 20 127-146 177-196 (356)
100 PRK14503 mannosyl-3-phosphogly 25.8 1.9E+02 0.004 27.4 5.9 26 114-140 147-172 (393)
101 PLN02458 transferase, transfer 25.8 3.4E+02 0.0073 25.4 7.5 81 59-140 107-214 (346)
102 cd01135 V_A-ATPase_B V/A-type 25.7 3E+02 0.0066 24.7 7.1 71 64-137 101-174 (276)
103 TIGR02460 osmo_MPGsynth mannos 25.5 1.9E+02 0.0042 27.2 5.9 26 114-140 146-171 (381)
104 PLN02958 diacylglycerol kinase 25.3 2.3E+02 0.005 27.3 6.7 68 63-139 111-179 (481)
105 PF00289 CPSase_L_chain: Carba 24.5 62 0.0013 24.8 2.2 30 189-218 74-105 (110)
106 PF08260 Kinin: Insect kinin p 23.9 43 0.00093 14.2 0.7 7 192-198 2-8 (8)
107 cd02515 Glyco_transf_6 Glycosy 23.7 5E+02 0.011 23.4 8.0 20 126-145 121-140 (271)
108 TIGR03496 FliI_clade1 flagella 23.4 3.5E+02 0.0076 25.6 7.5 68 66-136 165-234 (411)
109 PRK08972 fliI flagellum-specif 23.2 3.2E+02 0.007 26.3 7.2 70 65-137 189-260 (444)
110 KOG3987|consensus 23.2 1E+02 0.0023 27.2 3.6 24 173-201 87-113 (288)
111 PF02485 Branch: Core-2/I-Bran 22.7 1.9E+02 0.0041 24.3 5.2 36 109-144 68-104 (244)
112 cd01134 V_A-ATPase_A V/A-type 22.7 3.9E+02 0.0084 25.2 7.4 73 65-137 184-262 (369)
113 KOG1116|consensus 22.4 2.3E+02 0.005 28.3 6.1 80 56-144 172-252 (579)
114 cd01133 F1-ATPase_beta F1 ATP 21.6 3.4E+02 0.0073 24.4 6.6 69 65-136 99-170 (274)
115 PLN02189 cellulose synthase 20.8 1.3E+02 0.0028 32.1 4.2 48 95-143 497-547 (1040)
116 PLN02195 cellulose synthase A 20.4 1.4E+02 0.0031 31.5 4.5 49 95-144 418-469 (977)
117 PF05060 MGAT2: N-acetylglucos 20.1 2.5E+02 0.0054 26.3 5.6 27 63-89 30-56 (356)
No 1
>KOG3916|consensus
Probab=100.00 E-value=6.9e-62 Score=434.11 Aligned_cols=185 Identities=34% Similarity=0.633 Sum_probs=173.1
Q ss_pred HHhccccccceeecCCCCC---CCCCCCcCCCcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcccc
Q psy18177 35 LIILLINVQGCDCNSVGGS---LLSQSTLHDQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFN 111 (220)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~Fn 111 (220)
.++.|...|.++.++|... .++|++|.+++|||||||+|+|++||+.+|.+||++|+||+++|.|||+||.++++||
T Consensus 119 ~~~~~~~~e~v~~~~P~v~pGG~~~P~dC~ar~kvAIIIPfR~Re~HL~~~l~~LhP~LqrQrL~y~iyVieQ~g~~~FN 198 (372)
T KOG3916|consen 119 NFSMPSLLELVQKENPEVRPGGRYRPEDCQARHKVAIIIPFRNREEHLRYLLHHLHPFLQRQRLDYRIYVIEQAGNKPFN 198 (372)
T ss_pred ecccchHHHHHHhcCCCcCCCCCcCCCCCCccceeEEEeecccHHHHHHHHHHHhhHHHHhhhhceeEEEEEecCCCccc
Confidence 3445555688889888544 4599999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhHHHhhhcCCCceEEEeccccccCCCCccccCCCCceeeeecC--CCCCCCCcccccccccccchhhhhhcCC
Q psy18177 112 RGSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNYSYPGDAIMHIAAP--DLHPKYHYKTFLGGILMMKNEHFQTVNG 189 (220)
Q Consensus 112 R~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y~~~~~~p~hls~~--~~~~~~~~~~~~GG~~~i~kedf~kVnG 189 (220)
||+++|+|+++|+|...+||+||||||++|++|.|.|.|++ +|+|++.+ ++.+++||..+|||+.+++++||.+|||
T Consensus 199 RakL~NVGf~eAlkd~~wdCfIFHDVDllPenDrNlY~C~~-~PRH~sva~dk~gy~LPY~~~FGGVsalt~~qf~kING 277 (372)
T KOG3916|consen 199 RAKLLNVGFLEALKDYGWDCFIFHDVDLLPENDRNLYGCPE-QPRHMSVALDKFGYRLPYKEYFGGVSALTKEQFRKING 277 (372)
T ss_pred HHHhhhhHHHHHHHhcCCCEEEEecccccccCCCCccCCCC-CCcchhhhhhhccccccchhhhCchhhccHHHHHHhcC
Confidence 99999999999999899999999999999999999999998 89999865 5677899999999999999999999999
Q ss_pred CCCCCccCCCCcHHHHHHHHHCCCeEeCCCC
Q psy18177 190 LSNKYWGWGLEDDELYVRIKEARIRIERPEN 220 (220)
Q Consensus 190 fde~f~GWGgED~Dl~~Rl~~~G~~i~R~~g 220 (220)
|+|.||||||||||++.|+..+|++|.||++
T Consensus 278 FsN~fWGWGGEDDDl~nRv~~ag~~IsRp~~ 308 (372)
T KOG3916|consen 278 FSNAFWGWGGEDDDLWNRVQLAGMKISRPPP 308 (372)
T ss_pred CCchhcccCCcchHHHHHHHhcCceeecCCC
Confidence 9999999999999999999999999999974
No 2
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=100.00 E-value=3e-52 Score=357.65 Aligned_cols=157 Identities=48% Similarity=0.926 Sum_probs=150.2
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcccccchhhhhhHHHhhhcCCCceEEEeccccccC
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYIQENTHCDFIAMHDVDLIPI 142 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~FnR~~~lN~G~~~A~~~~~~D~lif~DvDlip~ 142 (220)
++|+|||||+|+|.+||+.||++|+++|++|+++|.|+|+||.++.+||||+++|+|+.+|+|..++||++|||||++|+
T Consensus 1 ~~~~aiivpyr~R~~~l~~~l~~~~~~L~rq~~~~~i~vi~Q~~~~~FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP~ 80 (219)
T cd00899 1 RHKVAIIVPFRNRFEHLLIFLPHLHPFLQRQQLDYRIFVIEQVGNFRFNRAKLLNVGFLEALKDGDWDCFIFHDVDLLPE 80 (219)
T ss_pred CcceEEEEecCCHHHHHHHHHHHHHHHHHhcCCcEEEEEEEecCCccchhhhhhhHHHHHHhhcCCccEEEEeccccccc
Confidence 47999999999999999999999999999999999999999999999999999999999999878899999999999999
Q ss_pred CCCccccCCCCceeeeecCC--CCCCCCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCCCC
Q psy18177 143 NPRLNYSYPGDAIMHIAAPD--LHPKYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPEN 220 (220)
Q Consensus 143 ~~~~~y~~~~~~p~hls~~~--~~~~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~g 220 (220)
++.+.|.|+. +|+|++.+. +++++||..++||+++++|+||.+||||||.|||||+||+||..|+..+|+++.|+++
T Consensus 81 ~~~~~y~~~~-~p~H~s~~~~~~~~~lpy~~~~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~ 159 (219)
T cd00899 81 NDRNLYGCEE-GPRHLSVPLDKFHYKLPYKTYFGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSG 159 (219)
T ss_pred CccccccCCC-CCeEEEEeecccccccCcccccccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccC
Confidence 9999999965 899998754 7889999999999999999999999999999999999999999999999999999864
No 3
>KOG3917|consensus
Probab=100.00 E-value=1.5e-43 Score=302.34 Aligned_cols=157 Identities=57% Similarity=1.120 Sum_probs=151.1
Q ss_pred CCcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcccccchhhhhhHHHhhhcCCCceEEEecccccc
Q psy18177 62 DQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYIQENTHCDFIAMHDVDLIP 141 (220)
Q Consensus 62 ~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~FnR~~~lN~G~~~A~~~~~~D~lif~DvDlip 141 (220)
+-+|++|+||||+|.|+|..|.+||.+||.+|++..+|+|++|.|.-.||||.++|+|+.+| ...+||+++||||++|
T Consensus 72 S~HklavlVPfRdRfEELl~FvPHM~~FL~rq~v~HHI~vlNQvD~fRFNRAsLINVGf~ea--s~~~DYiaMhDVDLLP 149 (310)
T KOG3917|consen 72 SYHKLAVLVPFRDRFEELLEFVPHMSKFLHRQNVSHHILVLNQVDPFRFNRASLINVGFNEA--SRLCDYIAMHDVDLLP 149 (310)
T ss_pred cceeEEEEechHHHHHHHHHhhHHHHHHHhhcCcceEEEEeeccCcceechhhheecchhhh--cchhceeeeccccccc
Confidence 34799999999999999999999999999999999999999999999999999999999999 5679999999999999
Q ss_pred CCCCccccCCCC-ceeeeecCCCCCCCCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCCCC
Q psy18177 142 INPRLNYSYPGD-AIMHIAAPDLHPKYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPEN 220 (220)
Q Consensus 142 ~~~~~~y~~~~~-~p~hls~~~~~~~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~g 220 (220)
.++...|.+|+. +|+|++.++.||+|+|..|.||++.+++++|.+.||++|.|||||.|||||+.|++.+|+.+.||+|
T Consensus 150 lN~el~Y~fP~~~gp~HiasP~lHPkYHY~~fvGGILll~~~hyk~~NGMSN~yWGWGlEDDEFy~RI~dagLqltRpsg 229 (310)
T KOG3917|consen 150 LNPELPYDFPGIGGPRHIASPQLHPKYHYEKFVGGILLLTLKHYKKLNGMSNKYWGWGLEDDEFYLRIIDAGLQLTRPSG 229 (310)
T ss_pred CCCCCCCCCCccCCcccccCcccCchhhhhhhcceeEEeeHHHHHHhcCccccccccCcccchhhheeccccceEecccC
Confidence 999999999854 7999999999999999999999999999999999999999999999999999999999999999987
No 4
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=100.00 E-value=2.6e-34 Score=229.19 Aligned_cols=114 Identities=38% Similarity=0.638 Sum_probs=86.0
Q ss_pred cccccceeecCCC---CCCCCCCCcCCCcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcccccchh
Q psy18177 39 LINVQGCDCNSVG---GSLLSQSTLHDQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSL 115 (220)
Q Consensus 39 ~~~~~~~~~~~~~---~~~~~~~~~~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~FnR~~~ 115 (220)
..+.++..-.++. ++.++|++|++.+|+|||||||+|++||+.||++|+++|++|+++|.|+|+||.++.+||||++
T Consensus 19 ~~~~~~~~~~~~~~~~gG~~~p~~C~~~~kvAiIIPyRdR~~hL~~fl~~l~~~L~rQ~~~y~I~vieQ~~~~~FNRg~L 98 (136)
T PF13733_consen 19 PPSFEEIEKNNPHVQPGGHWKPPDCKPRHKVAIIIPYRDREEHLRIFLPHLHPFLQRQQLDYRIFVIEQVDNGPFNRGKL 98 (136)
T ss_dssp ---HHHHHHHSTTSBTTTEE--SSSB-S-EEEEEEEESS-HHHHHHHHHHHHHHHHHTT-EEEEEEEEE-SSS---HHHH
T ss_pred CCCHHHHHHhCCCccccceecCCccccccceEEEEEeCCHHHHHHHHHHHHHHHHhhCcceEEEEEEeeccCCCCchhhh
Confidence 3444555555553 3445999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHhhhcCCCceEEEeccccccCCCCccccCCC
Q psy18177 116 INVGFLYIQENTHCDFIAMHDVDLIPINPRLNYSYPG 152 (220)
Q Consensus 116 lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y~~~~ 152 (220)
+|+|+.+|++..++||+||||||++|+++.+.|.|++
T Consensus 99 ~NvGf~eA~~~~~~dc~ifHDVDllP~~~~n~Y~C~~ 135 (136)
T PF13733_consen 99 MNVGFLEALKDDDFDCFIFHDVDLLPENDRNLYTCDE 135 (136)
T ss_dssp HHHHHHHHHHHS--SEEEEE-TTEEESBTTS-SS---
T ss_pred hhHHHHHHhhccCCCEEEEecccccccCCCceeeCCC
Confidence 9999999999888999999999999999999999975
No 5
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.90 E-value=8.7e-24 Score=186.46 Aligned_cols=147 Identities=22% Similarity=0.460 Sum_probs=105.4
Q ss_pred EEEEEecCCH------HHHHHHHHHHHHHhhhcCcceeEEEEEec--------------------------cCcccccch
Q psy18177 67 CLIIPFRDRF------DELLIFLMHMKVFLERQNIVYNVYVVNQV--------------------------DSYRFNRGS 114 (220)
Q Consensus 67 sVIIP~r~R~------~~L~~~L~~l~~~L~~q~~~~~I~Vveq~--------------------------~~~~FnR~~ 114 (220)
|||||+|+|. +.|+.+|..+... ....+++|+|++.+ .+..|++|+
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~--~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~~~~f~~a~ 78 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQF--QSDPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDNGEPFSRAK 78 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhc--CCCCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCCCCCcCHHH
Confidence 6999999988 4566667665422 11245677776531 234799999
Q ss_pred hhhhhHHHhhhcCCCceEEEeccccccCCCCcccc------CCCC------cee-eeecC-------CC-----------
Q psy18177 115 LINVGFLYIQENTHCDFIAMHDVDLIPINPRLNYS------YPGD------AIM-HIAAP-------DL----------- 163 (220)
Q Consensus 115 ~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y~------~~~~------~p~-hls~~-------~~----------- 163 (220)
++|.|++.| ++|+++|+|+||++.++++... .... .|. .++.. ..
T Consensus 79 arN~g~~~A----~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~~~~~~p~~yl~~~~~~~~~~~~~~~~~~~~~~~ 154 (281)
T PF10111_consen 79 ARNIGAKYA----RGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPNAFLVYPCLYLSEEGSEKFYSQFKNLWDHEFLES 154 (281)
T ss_pred HHHHHHHHc----CCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCCceEEEeeeeccchhhHHHhhcchhcchHHHHHH
Confidence 999999998 9999999999999998763211 1110 111 11110 00
Q ss_pred -----CCCCCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCCC
Q psy18177 164 -----HPKYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPE 219 (220)
Q Consensus 164 -----~~~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~ 219 (220)
.....+...+||++++.|++|.++|||||+|.|||+||.||..||...|..+.+++
T Consensus 155 ~~~~~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~ 215 (281)
T PF10111_consen 155 FISGKNSLWEFIAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSP 215 (281)
T ss_pred HhhccccccccccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecCh
Confidence 00112334677999999999999999999999999999999999999999998775
No 6
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=99.80 E-value=2.4e-20 Score=136.60 Aligned_cols=65 Identities=38% Similarity=0.897 Sum_probs=48.3
Q ss_pred eeeec--CCCCCCCCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCCCC
Q psy18177 156 MHIAA--PDLHPKYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPEN 220 (220)
Q Consensus 156 ~hls~--~~~~~~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~g 220 (220)
+|++. +.++++++|..++||+++++|++|.+||||||.|||||+||+||..|+..+|+++.|+++
T Consensus 1 rh~~~~~~~~~~~~~~~~~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 1 RHLSPSIDEFNYKYPYPNFFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp EEEETEEGGGTSS-SSTT---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SST
T ss_pred CCeeeccCcccCcCcCCCeeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCC
Confidence 35553 345677889999999999999999999999999999999999999999999999999763
No 7
>KOG3588|consensus
Probab=99.78 E-value=2.4e-19 Score=162.77 Aligned_cols=150 Identities=18% Similarity=0.238 Sum_probs=110.8
Q ss_pred ceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEe------------------------ccCcccccchhhhhhH
Q psy18177 65 ELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQ------------------------VDSYRFNRGSLINVGF 120 (220)
Q Consensus 65 kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq------------------------~~~~~FnR~~~lN~G~ 120 (220)
.+.+|+|.++|..-+..|+..+.. ...+++...|.++.. ..+..|+||+++-+|+
T Consensus 230 gih~i~pl~gr~~~f~rf~q~~c~-~~d~~l~l~vv~f~~se~e~ak~e~~tslra~f~~~q~l~lngeFSRa~aL~vGA 308 (494)
T KOG3588|consen 230 GIHMIMPLRGRAAIFARFAQSICA-RGDDRLALSVVYFGYSEDEMAKRETITSLRASFIPVQFLGLNGEFSRAKALMVGA 308 (494)
T ss_pred CceEEEeccchHHHhhhhhHHHhc-cCCCceEEEEEEecCCChHHHhhhHHHHHhhcCCceEEecccchhhhhHHHHhhH
Confidence 399999999999999999985421 122334444433321 1345799999999999
Q ss_pred HHhhhcCCCceEEEeccccccCCCCccccCCCC--------ceeeeecC---------C---------CCCCCCcccccc
Q psy18177 121 LYIQENTHCDFIAMHDVDLIPINPRLNYSYPGD--------AIMHIAAP---------D---------LHPKYHYKTFLG 174 (220)
Q Consensus 121 ~~A~~~~~~D~lif~DvDlip~~~~~~y~~~~~--------~p~hls~~---------~---------~~~~~~~~~~~G 174 (220)
..- ...-+++|+|||+++..++ .-+|..+ .|.-+|.. + +....+||+.||
T Consensus 309 e~~---~~nvLLFfcDVDi~FT~ef-L~rcr~Nt~~gkqiyfPivFS~ynp~ivy~~~~~~p~e~~~~~~~~tGfwRdfG 384 (494)
T KOG3588|consen 309 ETL---NANVLLFFCDVDIYFTTEF-LNRCRLNTILGKQIYFPIVFSQYNPEIVYEQDKPLPAEQQLVIKKDTGFWRDFG 384 (494)
T ss_pred HHh---ccceeEEEeccceeehHHH-HHHHhhccCCCceEEEEEEEeecCcceeecCCCCCchhHheeeccccccccccC
Confidence 875 2556799999999998775 2222221 24333311 0 011246788888
Q ss_pred -cccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCCC
Q psy18177 175 -GILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPE 219 (220)
Q Consensus 175 -G~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~ 219 (220)
|+.+++|.||.+|||||+...|||+||+||+.+...+|+++.|++
T Consensus 385 fGmtc~yrsd~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p 430 (494)
T KOG3588|consen 385 FGMTCQYRSDFLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTP 430 (494)
T ss_pred CceeEEeeccceeecCcceeeeccCcchHHHHHHHHhcCcEEEecC
Confidence 999999999999999999999999999999999999999999984
No 8
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.71 E-value=3.7e-17 Score=131.92 Aligned_cols=143 Identities=20% Similarity=0.329 Sum_probs=102.8
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEecc-------------------------CcccccchhhhhhHHH
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVD-------------------------SYRFNRGSLINVGFLY 122 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~-------------------------~~~FnR~~~lN~G~~~ 122 (220)
||||.||+.+.|+.+|.++.. ....+++|+|+++.. +.++.++.++|.|++.
T Consensus 1 ivip~~n~~~~l~~~l~sl~~---q~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~ 77 (182)
T cd06420 1 LIITTYNRPEALELVLKSVLN---QSILPFEVIIADDGSTEETKELIEEFKSQFPIPIKHVWQEDEGFRKAKIRNKAIAA 77 (182)
T ss_pred CEEeecCChHHHHHHHHHHHh---ccCCCCEEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCCcchhHHHHHHHHHHH
Confidence 689999999999999999753 223467888876421 1245567889999998
Q ss_pred hhhcCCCceEEEeccccccCCCCccc--cCCCCceeeeecCC--CCCCCCcccccccccccchhhhhhcCCCCCCCccCC
Q psy18177 123 IQENTHCDFIAMHDVDLIPINPRLNY--SYPGDAIMHIAAPD--LHPKYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWG 198 (220)
Q Consensus 123 A~~~~~~D~lif~DvDlip~~~~~~y--~~~~~~p~hls~~~--~~~~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWG 198 (220)
| ++|+++|.|.|.++.++.... .... ....+.... ...........|+.++++|+.+.++|||++.|.+||
T Consensus 78 a----~g~~i~~lD~D~~~~~~~l~~~~~~~~-~~~~v~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ggf~~~~~~~~ 152 (182)
T cd06420 78 A----KGDYLIFIDGDCIPHPDFIADHIELAE-PGVFLSGSRVLLNEKLTERGIRGCNMSFWKKDLLAVNGFDEEFTGWG 152 (182)
T ss_pred h----cCCEEEEEcCCcccCHHHHHHHHHHhC-CCcEEecceeecccccceeEeccceEEEEHHHHHHhCCCCcccccCC
Confidence 8 899999999999998775211 1111 001111000 000011134678899999999999999999999999
Q ss_pred CCcHHHHHHHHHCCCeEeCC
Q psy18177 199 LEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 199 gED~Dl~~Rl~~~G~~i~R~ 218 (220)
+||.|+..|+..+|+++.+.
T Consensus 153 ~eD~~l~~r~~~~g~~~~~~ 172 (182)
T cd06420 153 GEDSELVARLLNSGIKFRKL 172 (182)
T ss_pred cchHHHHHHHHHcCCcEEEe
Confidence 99999999999999776553
No 9
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=99.68 E-value=1.5e-16 Score=151.61 Aligned_cols=157 Identities=19% Similarity=0.358 Sum_probs=117.2
Q ss_pred CCcCCCcceEEEEEecCC-HHHHHHHHHHHHHHh-hhcC-cceeEEEE-E-----------------------------e
Q psy18177 58 STLHDQHELCLIIPFRDR-FDELLIFLMHMKVFL-ERQN-IVYNVYVV-N-----------------------------Q 104 (220)
Q Consensus 58 ~~~~~~~kvsVIIP~r~R-~~~L~~~L~~l~~~L-~~q~-~~~~I~Vv-e-----------------------------q 104 (220)
+..+...+|.||||..+| .+.+..||..++... +.+. ...-|+++ + +
T Consensus 241 ~~~~~~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~~~~~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~~~~~i~~i~ 320 (499)
T PF05679_consen 241 PYVTESTRVHIIVPLSGREADWFRRFLENFEKVCLETDDNVFLTVVLFYDPSDSDSISQIKELLEELERKYPFSRIKWIS 320 (499)
T ss_pred ccccCCCEEEEEEEecCccHHHHHHHHHHHHHHhcccCCceEEEEEEecCcccchhHHHHHHHHHHHHHhCCccceEEEE
Confidence 344556899999999999 999999999999864 3322 11112111 1 0
Q ss_pred ccCcccccchhhhhhHHHhhhcCCCceEEEeccccccCCCCccccCCCC--------ceeeeecC--C------------
Q psy18177 105 VDSYRFNRGSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNYSYPGD--------AIMHIAAP--D------------ 162 (220)
Q Consensus 105 ~~~~~FnR~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y~~~~~--------~p~hls~~--~------------ 162 (220)
...+.|+|+++++.|++.. ...++++|+|||+.+..++. .+|..+ .|..++.. .
T Consensus 321 ~~~~~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f~~~fL-~rcR~nti~g~qvy~PI~Fs~y~p~~~~~~~~~~~~~ 396 (499)
T PF05679_consen 321 VKTGEFSRGAALDVGAKKF---PPDSLLFFCDVDMVFTSDFL-NRCRMNTIPGKQVYFPIVFSQYNPDIVYAGKPPEPDQ 396 (499)
T ss_pred ecCCCccHHHHHHhhcccC---CCCcEEEEEeCCcccCHHHH-HHHHHhhhcCcEEEEeeeccccCCcccccCCCCcccc
Confidence 1226899999999999854 56789999999999988762 222211 25555421 0
Q ss_pred --CCCCCCcccccc-cccccchhhhhhc--CCCCCCCccCCCCcHHHHHHHHHCC--CeEeCC
Q psy18177 163 --LHPKYHYKTFLG-GILMMKNEHFQTV--NGLSNKYWGWGLEDDELYVRIKEAR--IRIERP 218 (220)
Q Consensus 163 --~~~~~~~~~~~G-G~~~i~kedf~kV--nGfde~f~GWGgED~Dl~~Rl~~~G--~~i~R~ 218 (220)
.....+|+..+| |++|++++||.++ |||++...|||+||.||+.++..+| ++|.|+
T Consensus 397 ~~i~~~~G~w~~~gfg~~~~YksDy~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra 459 (499)
T PF05679_consen 397 FDISKDTGFWRRFGFGMVCFYKSDYMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRA 459 (499)
T ss_pred CccCCCCCccccCCCceEEEEhhhhhhhcccccccccccccccHHHHHHHHHhCCCceEEEEc
Confidence 111246777777 9999999999999 9999999999999999999999999 999997
No 10
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.65 E-value=9.5e-16 Score=135.23 Aligned_cols=147 Identities=17% Similarity=0.150 Sum_probs=102.4
Q ss_pred EEEEEecCCH-HHHHHHHHHHHHHhhhcCcceeEEEEEecc-------------------------CcccccchhhhhhH
Q psy18177 67 CLIIPFRDRF-DELLIFLMHMKVFLERQNIVYNVYVVNQVD-------------------------SYRFNRGSLINVGF 120 (220)
Q Consensus 67 sVIIP~r~R~-~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~-------------------------~~~FnR~~~lN~G~ 120 (220)
|||||+||+. +.|..+|.++.... .....+||+||++.. +..+..++++|.|+
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~-~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~ 79 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRT-PPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKREGLIRARIAGA 79 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcC-chhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCCCCHHHHHHHHH
Confidence 6999999999 99999999874210 011246999987532 12355578999999
Q ss_pred HHhhhcCCCceEEEeccccccCCCCccc------cCCCC--cee----------eeecC---------C--CC-------
Q psy18177 121 LYIQENTHCDFIAMHDVDLIPINPRLNY------SYPGD--AIM----------HIAAP---------D--LH------- 164 (220)
Q Consensus 121 ~~A~~~~~~D~lif~DvDlip~~~~~~y------~~~~~--~p~----------hls~~---------~--~~------- 164 (220)
+.| ++|+++|.|.|+++.++.... .-+.. .|. +.... . .+
T Consensus 80 ~~A----~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (299)
T cd02510 80 RAA----TGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEE 155 (299)
T ss_pred HHc----cCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHH
Confidence 988 899999999999987653110 00000 010 00000 0 00
Q ss_pred ------CCCC--cccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 165 ------PKYH--YKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 165 ------~~~~--~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
+..+ .....|+.+++.|+-|.++|||||.|..||+||.||..|+..+|.++...
T Consensus 156 ~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~ 217 (299)
T cd02510 156 ERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIV 217 (299)
T ss_pred HhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEe
Confidence 0001 12346899999999999999999999999999999999999999998654
No 11
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.52 E-value=6e-14 Score=114.89 Aligned_cols=145 Identities=17% Similarity=0.250 Sum_probs=99.9
Q ss_pred ceEEEEEecCCH-HHHHHHHHHHHHHhhhcC-cceeEEEEEeccC------------------------cccccchhhhh
Q psy18177 65 ELCLIIPFRDRF-DELLIFLMHMKVFLERQN-IVYNVYVVNQVDS------------------------YRFNRGSLINV 118 (220)
Q Consensus 65 kvsVIIP~r~R~-~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~------------------------~~FnR~~~lN~ 118 (220)
++|||||+||+. ++|..+|.++. .|. .+++|+|+++... ..-..+.++|.
T Consensus 2 ~vsiii~~~n~~~~~l~~~l~sl~----~q~~~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~n~ 77 (202)
T cd04184 2 LISIVMPVYNTPEKYLREAIESVR----AQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREENGGISAATNS 77 (202)
T ss_pred eEEEEEecccCcHHHHHHHHHHHH----hCcCCCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccCCCHHHHHHH
Confidence 699999999999 99999999974 333 4578888874321 11224577899
Q ss_pred hHHHhhhcCCCceEEEeccccccCCCCcc-----c-cCCCCce-----eeeec-C-CCCC--CCC-------cccccccc
Q psy18177 119 GFLYIQENTHCDFIAMHDVDLIPINPRLN-----Y-SYPGDAI-----MHIAA-P-DLHP--KYH-------YKTFLGGI 176 (220)
Q Consensus 119 G~~~A~~~~~~D~lif~DvDlip~~~~~~-----y-~~~~~~p-----~hls~-~-~~~~--~~~-------~~~~~GG~ 176 (220)
|++.| ++|+++|.|.|..++++... . ..+...- ..... . ...+ ..+ .....++.
T Consensus 78 g~~~a----~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (202)
T cd04184 78 ALELA----TGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSEPFFKPDWSPDLLLSQNYIGHL 153 (202)
T ss_pred HHHhh----cCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCCCCEeccccCCCCCHHHhhhcCCccce
Confidence 99887 88999999999999877421 1 1111000 00000 0 0000 001 12345677
Q ss_pred cccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCCC
Q psy18177 177 LMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPE 219 (220)
Q Consensus 177 ~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~ 219 (220)
.+++|+.|.++||||+.|. |+||.||..|+..+|.++...+
T Consensus 154 ~~~~r~~~~~iggf~~~~~--~~eD~~l~~rl~~~g~~~~~~~ 194 (202)
T cd04184 154 LVYRRSLVRQVGGFREGFE--GAQDYDLVLRVSEHTDRIAHIP 194 (202)
T ss_pred EeEEHHHHHHhCCCCcCcc--cchhHHHHHHHHhccceEEEcc
Confidence 7899999999999999987 6799999999999999987544
No 12
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.50 E-value=9.3e-14 Score=109.05 Aligned_cols=135 Identities=19% Similarity=0.200 Sum_probs=100.4
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC--------------------cccccchhhhhhHHHhhhc
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS--------------------YRFNRGSLINVGFLYIQEN 126 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~--------------------~~FnR~~~lN~G~~~A~~~ 126 (220)
||||+|||.+.|..++.++. +|. .+++++|+++.+. ....++.++|.|++.|
T Consensus 1 vii~~~~~~~~l~~~l~sl~----~~~~~~~~iiivdd~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~n~~~~~~--- 73 (166)
T cd04186 1 IIIVNYNSLEYLKACLDSLL----AQTYPDFEVIVVDNASTDGSVELLRELFPEVRLIRNGENLGFGAGNNQGIREA--- 73 (166)
T ss_pred CEEEecCCHHHHHHHHHHHH----hccCCCeEEEEEECCCCchHHHHHHHhCCCeEEEecCCCcChHHHhhHHHhhC---
Confidence 68999999999999999975 333 4678888775321 2455678889999987
Q ss_pred CCCceEEEeccccccCCCCccccCC--CCceeeeecCCCCCCCCcccccccccccchhhhhhcCCCCCCCccCCCCcHHH
Q psy18177 127 THCDFIAMHDVDLIPINPRLNYSYP--GDAIMHIAAPDLHPKYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDEL 204 (220)
Q Consensus 127 ~~~D~lif~DvDlip~~~~~~y~~~--~~~p~hls~~~~~~~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl 204 (220)
++|+++|.|.|+.+.++....... ...+.... . .....|+.++++++.+.++||||+.|.. ++||.||
T Consensus 74 -~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~eD~~~ 143 (166)
T cd04186 74 -KGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGI---V-----GPKVSGAFLLVRREVFEEVGGFDEDFFL-YYEDVDL 143 (166)
T ss_pred -CCCEEEEECCCcEECccHHHHHHHHHHhCCCceE---E-----EccCceeeEeeeHHHHHHcCCCChhhhc-cccHHHH
Confidence 899999999999988764321110 00111000 0 0116889999999999999999999877 6699999
Q ss_pred HHHHHHCCCeEeCCC
Q psy18177 205 YVRIKEARIRIERPE 219 (220)
Q Consensus 205 ~~Rl~~~G~~i~R~~ 219 (220)
..|+...|+++...+
T Consensus 144 ~~~~~~~g~~i~~~~ 158 (166)
T cd04186 144 CLRARLAGYRVLYVP 158 (166)
T ss_pred HHHHHHcCCeEEEcc
Confidence 999999999987543
No 13
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.47 E-value=7.1e-14 Score=115.68 Aligned_cols=140 Identities=14% Similarity=0.135 Sum_probs=96.3
Q ss_pred ceEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccCc---------------------------cc-ccchh
Q psy18177 65 ELCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDSY---------------------------RF-NRGSL 115 (220)
Q Consensus 65 kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~~---------------------------~F-nR~~~ 115 (220)
+||||||.||..++|..+|+++. .|. .+++|+|+++.... +. .++.+
T Consensus 2 ~vsviip~~n~~~~l~~~L~sl~----~q~~~~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 77 (196)
T cd02520 2 GVSILKPLCGVDPNLYENLESFF----QQDYPKYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGINPKVNN 77 (196)
T ss_pred CeEEEEecCCCCccHHHHHHHHH----hccCCCeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCCCCHhHHH
Confidence 59999999999999999999874 333 45899888753210 11 12235
Q ss_pred hhhhHHHhhhcCCCceEEEeccccccCCCCccccCCCCceeeeecCCCCCCCCcccccccccccchhhhhhcCCCCCCCc
Q psy18177 116 INVGFLYIQENTHCDFIAMHDVDLIPINPRLNYSYPGDAIMHIAAPDLHPKYHYKTFLGGILMMKNEHFQTVNGLSNKYW 195 (220)
Q Consensus 116 lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y~~~~~~p~hls~~~~~~~~~~~~~~GG~~~i~kedf~kVnGfde~f~ 195 (220)
+|.|++.| ++|+++|+|.|+.+.++....... ++.......-.+ ....|+.+++.|+.|+++|||++ +.
T Consensus 78 ~n~g~~~a----~~d~i~~~D~D~~~~~~~l~~l~~-----~~~~~~~~~v~~-~~~~g~~~~~r~~~~~~~ggf~~-~~ 146 (196)
T cd02520 78 LIKGYEEA----RYDILVISDSDISVPPDYLRRMVA-----PLMDPGVGLVTC-LCAFGKSMALRREVLDAIGGFEA-FA 146 (196)
T ss_pred HHHHHHhC----CCCEEEEECCCceEChhHHHHHHH-----HhhCCCCCeEEe-ecccCceeeeEHHHHHhccChHH-Hh
Confidence 67787766 899999999999987765322110 010000000000 14567889999999999999976 33
Q ss_pred cCCCCcHHHHHHHHHCCCeEeCCC
Q psy18177 196 GWGLEDDELYVRIKEARIRIERPE 219 (220)
Q Consensus 196 GWGgED~Dl~~Rl~~~G~~i~R~~ 219 (220)
....||.||..|+..+|.++.-.+
T Consensus 147 ~~~~eD~~l~~rl~~~G~~i~~~~ 170 (196)
T cd02520 147 DYLAEDYFLGKLIWRLGYRVVLSP 170 (196)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEcc
Confidence 345799999999999999987543
No 14
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.43 E-value=1e-12 Score=109.00 Aligned_cols=141 Identities=19% Similarity=0.241 Sum_probs=97.3
Q ss_pred eEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC----------------cccccchhhhhhHHHhhhcCC
Q psy18177 66 LCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS----------------YRFNRGSLINVGFLYIQENTH 128 (220)
Q Consensus 66 vsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~----------------~~FnR~~~lN~G~~~A~~~~~ 128 (220)
||||||+||+.+.|..+|+++. .|. .+++|+|+++... .+-++|.++|.|+..| +
T Consensus 1 vsvii~~~n~~~~l~~~l~sl~----~q~~~~~evivvdd~s~d~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a----~ 72 (221)
T cd02522 1 LSIIIPTLNEAENLPRLLASLR----RLNPLPLEIIVVDGGSTDGTVAIARSAGVVVISSPKGRARQMNAGAAAA----R 72 (221)
T ss_pred CEEEEEccCcHHHHHHHHHHHH----hccCCCcEEEEEeCCCCccHHHHHhcCCeEEEeCCcCHHHHHHHHHHhc----c
Confidence 6899999999999999999864 332 5688998875421 1335688999999987 7
Q ss_pred CceEEEeccccccCCCCccc--c-CCCC----ce--eeeecCC-------CCC--CC-Cccc-ccccccccchhhhhhcC
Q psy18177 129 CDFIAMHDVDLIPINPRLNY--S-YPGD----AI--MHIAAPD-------LHP--KY-HYKT-FLGGILMMKNEHFQTVN 188 (220)
Q Consensus 129 ~D~lif~DvDlip~~~~~~y--~-~~~~----~p--~hls~~~-------~~~--~~-~~~~-~~GG~~~i~kedf~kVn 188 (220)
+|+++|.|.|..+.++...- . .... .+ ..+.... ... +. .... +-+..++++|+.|.++|
T Consensus 73 ~~~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~G 152 (221)
T cd02522 73 GDWLLFLHADTRLPPDWDAAIIETLRADGAVAGAFRLRFDDPGPRLRLLELGANLRSRLFGLPYGDQGLFIRRELFEELG 152 (221)
T ss_pred CCEEEEEcCCCCCChhHHHHHHHHhhcCCcEEEEEEeeecCCccchhhhhhcccceecccCCCcCCceEEEEHHHHHHhC
Confidence 89999999999998764211 0 0000 00 0111000 000 00 0111 22346788999999999
Q ss_pred CCCCCCccCCCCcHHHHHHHHHCCCeEeC
Q psy18177 189 GLSNKYWGWGLEDDELYVRIKEARIRIER 217 (220)
Q Consensus 189 Gfde~f~GWGgED~Dl~~Rl~~~G~~i~R 217 (220)
|||+.+ ++||.||..|+..+|.++.-
T Consensus 153 ~fd~~~---~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 153 GFPELP---LMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred CCCccc---cccHHHHHHHHHhCCCEEEc
Confidence 999999 67999999999999988763
No 15
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.41 E-value=6.9e-13 Score=109.20 Aligned_cols=137 Identities=18% Similarity=0.167 Sum_probs=96.2
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC----------------------cccccchhhhhhHHHhh
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS----------------------YRFNRGSLINVGFLYIQ 124 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~----------------------~~FnR~~~lN~G~~~A~ 124 (220)
||||.||+++.|..+|.++. +|. .+++|+|+++... .....+.++|.|+..|+
T Consensus 1 viI~~~n~~~~l~~~l~sl~----~q~~~~~eiiivD~~s~d~t~~~~~~~~~~~~i~~~~~~~n~g~~~~~n~~~~~a~ 76 (202)
T cd04185 1 AVVVTYNRLDLLKECLDALL----AQTRPPDHIIVIDNASTDGTAEWLTSLGDLDNIVYLRLPENLGGAGGFYEGVRRAY 76 (202)
T ss_pred CEEEeeCCHHHHHHHHHHHH----hccCCCceEEEEECCCCcchHHHHHHhcCCCceEEEECccccchhhHHHHHHHHHh
Confidence 69999999999999999963 443 3578988875321 12223457899999886
Q ss_pred hcCCCceEEEeccccccCCCCccc---cCCCCceeeeecCCCCCCCCcccccccccccchhhhhhcCCCCCCCccCCCCc
Q psy18177 125 ENTHCDFIAMHDVDLIPINPRLNY---SYPGDAIMHIAAPDLHPKYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLED 201 (220)
Q Consensus 125 ~~~~~D~lif~DvDlip~~~~~~y---~~~~~~p~hls~~~~~~~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED 201 (220)
..++|+++|.|.|.++.++...- .+.... ..+..+. ...... .++.+.+.|+.|.++|||++.|..|| ||
T Consensus 77 -~~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~-~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~-eD 149 (202)
T cd04185 77 -ELGYDWIWLMDDDAIPDPDALEKLLAYADKDN-PQFLAPL---VLDPDG-SFVGVLISRRVVEKIGLPDKEFFIWG-DD 149 (202)
T ss_pred -ccCCCEEEEeCCCCCcChHHHHHHHHHHhcCC-ceEecce---eEcCCC-ceEEEEEeHHHHHHhCCCChhhhccc-hH
Confidence 56899999999999998764211 011000 0110000 000111 33456799999999999999998887 99
Q ss_pred HHHHHHHHHCCCeE
Q psy18177 202 DELYVRIKEARIRI 215 (220)
Q Consensus 202 ~Dl~~Rl~~~G~~i 215 (220)
.|+..|+..+|.++
T Consensus 150 ~~~~~r~~~~G~~i 163 (202)
T cd04185 150 TEYTLRASKAGPGI 163 (202)
T ss_pred HHHHHHHHHcCCcE
Confidence 99999999999998
No 16
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.40 E-value=8.3e-13 Score=111.48 Aligned_cols=142 Identities=15% Similarity=0.206 Sum_probs=95.5
Q ss_pred ceEEEEEecCCHHHHHHHHHHHHHHhhhcCc---ceeEEEEEeccCc----------------------------ccccc
Q psy18177 65 ELCLIIPFRDRFDELLIFLMHMKVFLERQNI---VYNVYVVNQVDSY----------------------------RFNRG 113 (220)
Q Consensus 65 kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~---~~~I~Vveq~~~~----------------------------~FnR~ 113 (220)
+||||||.||..+.|..+|.++. +|.. .++|+|++...+. +| |+
T Consensus 2 ~vSViIp~yNe~~~l~~~L~sl~----~q~~~~~~~eIiVvD~s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~G~-k~ 76 (232)
T cd06437 2 MVTVQLPVFNEKYVVERLIEAAC----ALDYPKDRLEIQVLDDSTDETVRLAREIVEEYAAQGVNIKHVRRADRTGY-KA 76 (232)
T ss_pred ceEEEEecCCcHHHHHHHHHHHH----hcCCCccceEEEEEECCCCcHHHHHHHHHHHHhhcCCceEEEECCCCCCC-ch
Confidence 69999999999999999999864 4543 3677777643211 11 45
Q ss_pred hhhhhhHHHhhhcCCCceEEEeccccccCCCCccc---cC--CCC---ce--eeeecC-C-------C----CC------
Q psy18177 114 SLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNY---SY--PGD---AI--MHIAAP-D-------L----HP------ 165 (220)
Q Consensus 114 ~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y---~~--~~~---~p--~hls~~-~-------~----~~------ 165 (220)
.++|.|+..| ++||++|.|.|+++.++.+.. .. ++. ++ .+.... . . +.
T Consensus 77 ~a~n~g~~~a----~~~~i~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (232)
T cd06437 77 GALAEGMKVA----KGEYVAIFDADFVPPPDFLQKTPPYFADPKLGFVQTRWGHINANYSLLTRVQAMSLDYHFTIEQVA 152 (232)
T ss_pred HHHHHHHHhC----CCCEEEEEcCCCCCChHHHHHhhhhhcCCCeEEEecceeeEcCCCchhhHhhhhhHHhhhhHhHhh
Confidence 6789999877 999999999999998775211 00 000 00 011100 0 0 00
Q ss_pred CC---CcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 166 KY---HYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 166 ~~---~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
.. ....+.|+..++.|+.|.++|||++... .||.||..|+...|.++...
T Consensus 153 ~~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~~~---~ED~~l~~rl~~~G~~~~~~ 205 (232)
T cd06437 153 RSSTGLFFNFNGTAGVWRKECIEDAGGWNHDTL---TEDLDLSYRAQLKGWKFVYL 205 (232)
T ss_pred HhhcCCeEEeccchhhhhHHHHHHhCCCCCCcc---hhhHHHHHHHHHCCCeEEEe
Confidence 00 0112346666788999999999999753 59999999999999998654
No 17
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.39 E-value=4.1e-12 Score=106.59 Aligned_cols=145 Identities=19% Similarity=0.148 Sum_probs=101.6
Q ss_pred ceEEEEEecCCHHHHHHHHHHHHHHhhhcC---cceeEEEEEeccC----------------------cccccchhhhhh
Q psy18177 65 ELCLIIPFRDRFDELLIFLMHMKVFLERQN---IVYNVYVVNQVDS----------------------YRFNRGSLINVG 119 (220)
Q Consensus 65 kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~---~~~~I~Vveq~~~----------------------~~FnR~~~lN~G 119 (220)
+++||||+||+.+.|..+|+++. +|. .+++|+|+++.+. .....+.++|.|
T Consensus 1 ~~sIiip~~n~~~~l~~~l~sl~----~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~~~~~~a~N~g 76 (249)
T cd02525 1 FVSIIIPVRNEEKYIEELLESLL----NQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPKRIQSAGLNIG 76 (249)
T ss_pred CEEEEEEcCCchhhHHHHHHHHH----hccCCCCccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCCCCCchHHHHHH
Confidence 58999999999999999999864 343 3688988875422 223467889999
Q ss_pred HHHhhhcCCCceEEEeccccccCCCCccc-----cCCCC----ceeeeec-------------CCCCC-----CCC----
Q psy18177 120 FLYIQENTHCDFIAMHDVDLIPINPRLNY-----SYPGD----AIMHIAA-------------PDLHP-----KYH---- 168 (220)
Q Consensus 120 ~~~A~~~~~~D~lif~DvDlip~~~~~~y-----~~~~~----~p~hls~-------------~~~~~-----~~~---- 168 (220)
++.| ++|+++|.|.|.++.++.... .-++. ++..... ..+.. ...
T Consensus 77 ~~~a----~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (249)
T cd02525 77 IRNS----RGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIGESKFQKAIAVAQSSPLGSGGSAYRGGAVKI 152 (249)
T ss_pred HHHh----CCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecceecCCCChHHHHHHHHhhchhccCCcccccccccc
Confidence 9988 899999999999988764211 00000 0110000 00000 000
Q ss_pred cccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCCC
Q psy18177 169 YKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPE 219 (220)
Q Consensus 169 ~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~ 219 (220)
.....|+..+++|+.|.++||||+.|. ++||.||..|+..+|.++...+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~eD~~l~~r~~~~G~~~~~~~ 201 (249)
T cd02525 153 GYVDTVHHGAYRREVFEKVGGFDESLV--RNEDAELNYRLRKAGYKIWLSP 201 (249)
T ss_pred ccccccccceEEHHHHHHhCCCCcccC--ccchhHHHHHHHHcCcEEEEcC
Confidence 113467888999999999999999986 3699999999999999987544
No 18
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.38 E-value=3.2e-12 Score=117.60 Aligned_cols=150 Identities=15% Similarity=0.208 Sum_probs=99.7
Q ss_pred CCcceEEEEEecCCHHHHHHHHHHHHHHhhhcCc--ceeEEEEEeccCc-----------------------------cc
Q psy18177 62 DQHELCLIIPFRDRFDELLIFLMHMKVFLERQNI--VYNVYVVNQVDSY-----------------------------RF 110 (220)
Q Consensus 62 ~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~--~~~I~Vveq~~~~-----------------------------~F 110 (220)
...+||||||.||.+++|..+|+++. .|.. +++|+|+++.+.+ ++
T Consensus 38 ~~p~VSVIIpa~Ne~~~L~~~L~sL~----~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~ 113 (384)
T TIGR03469 38 AWPAVVAVVPARNEADVIGECVTSLL----EQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPGW 113 (384)
T ss_pred CCCCEEEEEecCCcHhHHHHHHHHHH----hCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCCC
Confidence 45689999999999999999999863 4543 4899998863210 11
Q ss_pred -ccchhhhhhHHHhhhc-CCCceEEEeccccccCCCCcc-----ccCCCC-----ceeeeecC----------------C
Q psy18177 111 -NRGSLINVGFLYIQEN-THCDFIAMHDVDLIPINPRLN-----YSYPGD-----AIMHIAAP----------------D 162 (220)
Q Consensus 111 -nR~~~lN~G~~~A~~~-~~~D~lif~DvDlip~~~~~~-----y~~~~~-----~p~hls~~----------------~ 162 (220)
.|+.++|.|++.|.+. .++|+++|.|.|+.++++... ..-.+. .++..... .
T Consensus 114 ~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~~~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (384)
T TIGR03469 114 SGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARAEGLDLVSLMVRLRCESFWEKLLIPAFVFFFQKL 193 (384)
T ss_pred cchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHhCCCCEEEecccccCCCHHHHHHHHHHHHHHHHh
Confidence 1334789999988211 118999999999998877421 100000 01100000 0
Q ss_pred C------CCCCCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEe
Q psy18177 163 L------HPKYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIE 216 (220)
Q Consensus 163 ~------~~~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~ 216 (220)
. .+........|+.+++.|+.|+++|||++.+.-. .||.|+..|++.+|.++.
T Consensus 194 ~~~~~~~~~~~~~~~~~G~~~lirr~~~~~vGGf~~~~~~~-~ED~~L~~r~~~~G~~v~ 252 (384)
T TIGR03469 194 YPFRWVNDPRRRTAAAAGGCILIRREALERIGGIAAIRGAL-IDDCTLAAAVKRSGGRIW 252 (384)
T ss_pred cchhhhcCCCccceeecceEEEEEHHHHHHcCCHHHHhhCc-ccHHHHHHHHHHcCCcEE
Confidence 0 0000011247899999999999999999854443 599999999999998775
No 19
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.33 E-value=1e-11 Score=105.87 Aligned_cols=144 Identities=13% Similarity=0.194 Sum_probs=97.0
Q ss_pred cceEEEEEecCCHHHHHHHHHHHHHHhhhcCc---ceeEEEEEeccC------------------------cccccchhh
Q psy18177 64 HELCLIIPFRDRFDELLIFLMHMKVFLERQNI---VYNVYVVNQVDS------------------------YRFNRGSLI 116 (220)
Q Consensus 64 ~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~---~~~I~Vveq~~~------------------------~~FnR~~~l 116 (220)
+++|||||+||.++.|..+|+++. .|.. .++|+|+++.++ ....+++++
T Consensus 1 p~vsIiIp~~Ne~~~l~~~l~sl~----~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~~G~~~a~ 76 (241)
T cd06427 1 PVYTILVPLYKEAEVLPQLIASLS----ALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQPRTKPKAC 76 (241)
T ss_pred CeEEEEEecCCcHHHHHHHHHHHH----hCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCCCCchHHHH
Confidence 369999999999999999999864 3433 378888764321 123357899
Q ss_pred hhhHHHhhhcCCCceEEEeccccccCCCCccc---cCC---CC-----cee-eeecC-CC-----C--------------
Q psy18177 117 NVGFLYIQENTHCDFIAMHDVDLIPINPRLNY---SYP---GD-----AIM-HIAAP-DL-----H-------------- 164 (220)
Q Consensus 117 N~G~~~A~~~~~~D~lif~DvDlip~~~~~~y---~~~---~~-----~p~-hls~~-~~-----~-------------- 164 (220)
|.|++.| ++|+++|.|.|+++.++...- .+. .. .+. +.... .. .
T Consensus 77 n~g~~~a----~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (241)
T cd06427 77 NYALAFA----RGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGL 152 (241)
T ss_pred HHHHHhc----CCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999987 899999999999988875310 010 00 000 00000 00 0
Q ss_pred CCCCcc-cccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 165 PKYHYK-TFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 165 ~~~~~~-~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
...... ...|..++++|+.|+++|||++. .+ .||.|+..|+..+|+++.-.
T Consensus 153 ~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~--~~-~eD~~l~~rl~~~G~r~~~~ 204 (241)
T cd06427 153 ARLGLPIPLGGTSNHFRTDVLRELGGWDPF--NV-TEDADLGLRLARAGYRTGVL 204 (241)
T ss_pred HhcCCeeecCCchHHhhHHHHHHcCCCCcc--cc-hhhHHHHHHHHHCCceEEEe
Confidence 000111 12455678999999999999984 33 59999999999999988643
No 20
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.33 E-value=5.3e-12 Score=105.98 Aligned_cols=143 Identities=15% Similarity=0.192 Sum_probs=96.7
Q ss_pred EEEEecCCH-HHHHHHHHHHHHHhhhcCcceeEEEEEeccC--------------------cccccchhhhhhHHHhhhc
Q psy18177 68 LIIPFRDRF-DELLIFLMHMKVFLERQNIVYNVYVVNQVDS--------------------YRFNRGSLINVGFLYIQEN 126 (220)
Q Consensus 68 VIIP~r~R~-~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~--------------------~~FnR~~~lN~G~~~A~~~ 126 (220)
+|||.||+. +.|..+|.++. .| .++|+|++.+.+ ....++.++|.|++.|..
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~----~q--~~~iivvDn~s~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~N~g~~~a~~- 73 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALA----EQ--VDKVVVVDNSSGNDIELRLRLNSEKIELIHLGENLGIAKALNIGIKAALE- 73 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHh----cc--CCEEEEEeCCCCccHHHHhhccCCcEEEEECCCceehHHhhhHHHHHHHh-
Confidence 478899998 99999999964 34 567888764321 234478899999998821
Q ss_pred CCCceEEEeccccccCCCCcccc-----CCCC-------ceeeeecC--CC----C-CC-------------CCcccccc
Q psy18177 127 THCDFIAMHDVDLIPINPRLNYS-----YPGD-------AIMHIAAP--DL----H-PK-------------YHYKTFLG 174 (220)
Q Consensus 127 ~~~D~lif~DvDlip~~~~~~y~-----~~~~-------~p~hls~~--~~----~-~~-------------~~~~~~~G 174 (220)
.++|+++|.|.|.++.++..... .... +|...... .. . .. .+.....|
T Consensus 74 ~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (237)
T cd02526 74 NGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLIT 153 (237)
T ss_pred CCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccceeccCccceecccccCCceEeeeeec
Confidence 15699999999999887753211 1110 12211100 00 0 00 00112235
Q ss_pred cccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 175 GILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 175 G~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
+.+++.|+.|.++||||+.+. .++||.||..|+..+|.++...
T Consensus 154 ~~~~~rr~~~~~~ggfd~~~~-~~~eD~d~~~r~~~~G~~~~~~ 196 (237)
T cd02526 154 SGSLISLEALEKVGGFDEDLF-IDYVDTEWCLRARSKGYKIYVV 196 (237)
T ss_pred cceEEcHHHHHHhCCCCHHHc-CccchHHHHHHHHHcCCcEEEE
Confidence 556899999999999999986 5679999999999999988643
No 21
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.32 E-value=2.6e-11 Score=111.76 Aligned_cols=148 Identities=14% Similarity=0.161 Sum_probs=101.2
Q ss_pred cCCCcceEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC-----------------------cccccchh
Q psy18177 60 LHDQHELCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS-----------------------YRFNRGSL 115 (220)
Q Consensus 60 ~~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~-----------------------~~FnR~~~ 115 (220)
....+++|||||.||+.+.+..+++++. +|+ .+++|+|+++.++ +.-.++.+
T Consensus 50 ~~~~p~vsViIp~yne~~~i~~~l~sl~----~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n~Gka~a 125 (420)
T PRK11204 50 LKEYPGVSILVPCYNEGENVEETISHLL----ALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAENQGKANA 125 (420)
T ss_pred cCCCCCEEEEEecCCCHHHHHHHHHHHH----hCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCCCCHHHH
Confidence 3445689999999999999999998863 343 4689998876321 11235668
Q ss_pred hhhhHHHhhhcCCCceEEEeccccccCCCCcccc---C--CCC-----c-eeeeecC---------CCCC----------
Q psy18177 116 INVGFLYIQENTHCDFIAMHDVDLIPINPRLNYS---Y--PGD-----A-IMHIAAP---------DLHP---------- 165 (220)
Q Consensus 116 lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y~---~--~~~-----~-p~hls~~---------~~~~---------- 165 (220)
+|.|++.| ++|++++.|.|.+++++..... + ... + +...... ++..
T Consensus 126 ln~g~~~a----~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (420)
T PRK11204 126 LNTGAAAA----RSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNRSTLLGRIQVGEFSSIIGLIKRAQR 201 (420)
T ss_pred HHHHHHHc----CCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccchhHHHHHHHHHHHHhhhHHHHHHH
Confidence 89998877 8999999999999998853211 1 110 0 1100000 0000
Q ss_pred CCCc-ccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 166 KYHY-KTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 166 ~~~~-~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
.... ....|+..++.|+.+.++||||+... .||.|+..|+..+|+++.-.
T Consensus 202 ~~~~~~~~~G~~~~~rr~~l~~vgg~~~~~~---~ED~~l~~rl~~~G~~i~~~ 252 (420)
T PRK11204 202 VYGRVFTVSGVITAFRKSALHEVGYWSTDMI---TEDIDISWKLQLRGWDIRYE 252 (420)
T ss_pred HhCCceEecceeeeeeHHHHHHhCCCCCCcc---cchHHHHHHHHHcCCeEEec
Confidence 0000 12246778899999999999999876 49999999999999998644
No 22
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.31 E-value=6.6e-12 Score=105.09 Aligned_cols=142 Identities=17% Similarity=0.147 Sum_probs=93.2
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhcCc--ceeEEEEEeccCc---------------------------c--cccchhh
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQNI--VYNVYVVNQVDSY---------------------------R--FNRGSLI 116 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q~~--~~~I~Vveq~~~~---------------------------~--FnR~~~l 116 (220)
||||+||+.+.|..+|.++. .|.. +++|+|+++.+.. + -..+.++
T Consensus 1 ViIp~yn~~~~l~~~l~sl~----~q~~~~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~ 76 (219)
T cd06913 1 IILPVHNGEQWLDECLESVL----QQDFEGTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAK 76 (219)
T ss_pred CEEeecCcHHHHHHHHHHHH----hCCCCCCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCCCCccHHHHH
Confidence 69999999999999999963 4543 5899999864210 1 1234688
Q ss_pred hhhHHHhhhcCCCceEEEeccccccCCCCcc--c-cC---CCC--ceeeeecC-CCCC-------CCC------------
Q psy18177 117 NVGFLYIQENTHCDFIAMHDVDLIPINPRLN--Y-SY---PGD--AIMHIAAP-DLHP-------KYH------------ 168 (220)
Q Consensus 117 N~G~~~A~~~~~~D~lif~DvDlip~~~~~~--y-~~---~~~--~p~hls~~-~~~~-------~~~------------ 168 (220)
|.|++.| ++|+++|.|.|.++.++... + .. +.. +....... .... ...
T Consensus 77 N~g~~~a----~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (219)
T cd06913 77 NQAIAQS----SGRYLCFLDSDDVMMPQRIRLQYEAALQHPNSIIGCQVRRIPEDSTERYTRWINTLTREQLLTQVYTSH 152 (219)
T ss_pred HHHHHhc----CCCEEEEECCCccCChhHHHHHHHHHHhCCCcEEEEEEEecCcccchhhHHHHHhcCHHHHHHHHHhhc
Confidence 9999877 89999999999987765321 1 00 100 01100000 0000 000
Q ss_pred cccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 169 YKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 169 ~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
........+.+.|+.|.++|||++.+.+++ ||.||..|+..+|.++.+.
T Consensus 153 ~~~~~~~~~~~rr~~~~~~g~f~~~~~~~~-eD~~l~~r~~~~g~~i~~~ 201 (219)
T cd06913 153 GPTVIMPTWFCSREWFSHVGPFDEGGKGVP-EDLLFFYEHLRKGGGVYRV 201 (219)
T ss_pred CCccccccceeehhHHhhcCCccchhccch-hHHHHHHHHHHcCCceEEE
Confidence 001111224589999999999999987665 9999999999999888654
No 23
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.31 E-value=1.8e-11 Score=100.31 Aligned_cols=142 Identities=18% Similarity=0.176 Sum_probs=95.1
Q ss_pred EEEEEecCCH--HHHHHHHHHHHHHhhhcC-cceeEEEEEecc-C----------------------cccccchhhhhhH
Q psy18177 67 CLIIPFRDRF--DELLIFLMHMKVFLERQN-IVYNVYVVNQVD-S----------------------YRFNRGSLINVGF 120 (220)
Q Consensus 67 sVIIP~r~R~--~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~-~----------------------~~FnR~~~lN~G~ 120 (220)
|||||+||+. +.|..+|+++. .|. .+++++|+++.. + ..-..+.++|.|+
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~----~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~~~i~~i~~~~n~G~~~a~N~g~ 76 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESIL----KQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKLPLKVVPLEKNRGLGKALNEGL 76 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHH----hcCCCCcEEEEEECCCCchhHHHHHHHHHhcCCeEEEEcCccccHHHHHHHHH
Confidence 6999999986 68999999863 454 358888886532 1 0112367889998
Q ss_pred HHhhhcCCCceEEEeccccccCCCCccc--c----CCCC----cee-eeecC------CCCCC---------CCcccccc
Q psy18177 121 LYIQENTHCDFIAMHDVDLIPINPRLNY--S----YPGD----AIM-HIAAP------DLHPK---------YHYKTFLG 174 (220)
Q Consensus 121 ~~A~~~~~~D~lif~DvDlip~~~~~~y--~----~~~~----~p~-hls~~------~~~~~---------~~~~~~~G 174 (220)
+.| ++|+++|.|.|.++.++.... . -++. +.. .+... ...+. .....+.+
T Consensus 77 ~~a----~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (201)
T cd04195 77 KHC----TYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRRLPTSHDDILKFARRRSPFNH 152 (201)
T ss_pred Hhc----CCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeeccccCCCCHHHHHHHhccCCCCCC
Confidence 877 899999999999988764211 0 0000 000 00000 00000 01123446
Q ss_pred cccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCCC
Q psy18177 175 GILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPE 219 (220)
Q Consensus 175 G~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~ 219 (220)
+.+++.|+.+.++|||++. .++||.||..|+..+|.++...+
T Consensus 153 ~~~~~rr~~~~~~g~~~~~---~~~eD~~~~~r~~~~g~~~~~~~ 194 (201)
T cd04195 153 PTVMFRKSKVLAVGGYQDL---PLVEDYALWARMLANGARFANLP 194 (201)
T ss_pred hHHhhhHHHHHHcCCcCCC---CCchHHHHHHHHHHcCCceeccc
Confidence 7789999999999999987 67899999999999999887543
No 24
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.31 E-value=1.5e-11 Score=99.23 Aligned_cols=140 Identities=14% Similarity=0.084 Sum_probs=96.6
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC--------------------cccccchhhhhhHHHhhh
Q psy18177 67 CLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS--------------------YRFNRGSLINVGFLYIQE 125 (220)
Q Consensus 67 sVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~--------------------~~FnR~~~lN~G~~~A~~ 125 (220)
|||||+||+++.|..+|.++. .|. .+++|+|+++... ....++.++|.|++.|
T Consensus 1 sivi~~~n~~~~l~~~l~sl~----~q~~~~~evivvDd~s~d~~~~~~~~~~~~~~~~~~~~~~g~~~a~n~~~~~a-- 74 (202)
T cd06433 1 SIITPTYNQAETLEETIDSVL----SQTYPNIEYIVIDGGSTDGTVDIIKKYEDKITYWISEPDKGIYDAMNKGIALA-- 74 (202)
T ss_pred CEEEeccchHHHHHHHHHHHH----hCCCCCceEEEEeCCCCccHHHHHHHhHhhcEEEEecCCcCHHHHHHHHHHHc--
Confidence 689999999999999999864 444 3489999875321 2345678899999987
Q ss_pred cCCCceEEEeccccccCCCCccc------cCCCC----ceee-eecCC--CCC---------CC-Ccccccccccccchh
Q psy18177 126 NTHCDFIAMHDVDLIPINPRLNY------SYPGD----AIMH-IAAPD--LHP---------KY-HYKTFLGGILMMKNE 182 (220)
Q Consensus 126 ~~~~D~lif~DvDlip~~~~~~y------~~~~~----~p~h-ls~~~--~~~---------~~-~~~~~~GG~~~i~ke 182 (220)
++||++|.|.|..+.++...- ..+.. +... ..... ... .. .-....++.+++.|+
T Consensus 75 --~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (202)
T cd06433 75 --TGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGRRRPPPFLDKFLLYGMPICHQATFFRRS 152 (202)
T ss_pred --CCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCCcccCCCCcchhhhHHhhcCcccCcceEEEHH
Confidence 889999999999988764211 11110 0110 11000 000 00 112344566779999
Q ss_pred hhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEe
Q psy18177 183 HFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIE 216 (220)
Q Consensus 183 df~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~ 216 (220)
.|.++|||++.+.. +||.|+..|+...|.++.
T Consensus 153 ~~~~~~~f~~~~~~--~~D~~~~~r~~~~g~~~~ 184 (202)
T cd06433 153 LFEKYGGFDESYRI--AADYDLLLRLLLAGKIFK 184 (202)
T ss_pred HHHHhCCCchhhCc--hhhHHHHHHHHHcCCceE
Confidence 99999999998863 489999999999999884
No 25
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.29 E-value=3.3e-11 Score=100.62 Aligned_cols=143 Identities=16% Similarity=0.187 Sum_probs=96.4
Q ss_pred ceEEEEEecCCH-HHHHHHHHHHHHHhhhcCcc---eeEEEEEeccC-----------------------cccccchhhh
Q psy18177 65 ELCLIIPFRDRF-DELLIFLMHMKVFLERQNIV---YNVYVVNQVDS-----------------------YRFNRGSLIN 117 (220)
Q Consensus 65 kvsVIIP~r~R~-~~L~~~L~~l~~~L~~q~~~---~~I~Vveq~~~-----------------------~~FnR~~~lN 117 (220)
+||||||+||+. +.|+..|.++. .|..+ ++|+|+++..+ ..-.++.++|
T Consensus 2 ~vsviip~~n~~~~~l~~~l~sl~----~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 77 (234)
T cd06421 2 TVDVFIPTYNEPLEIVRKTLRAAL----AIDYPHDKLRVYVLDDGRRPELRALAAELGVEYGYRYLTRPDNRHAKAGNLN 77 (234)
T ss_pred ceEEEEecCCCcHHHHHHHHHHHH----hcCCCcccEEEEEEcCCCchhHHHHHHHhhcccCceEEEeCCCCCCcHHHHH
Confidence 699999999985 67888888863 45433 79998875321 1112345678
Q ss_pred hhHHHhhhcCCCceEEEeccccccCCCCccc---cCCC-C------ceeeeecC-CC---CC------------------
Q psy18177 118 VGFLYIQENTHCDFIAMHDVDLIPINPRLNY---SYPG-D------AIMHIAAP-DL---HP------------------ 165 (220)
Q Consensus 118 ~G~~~A~~~~~~D~lif~DvDlip~~~~~~y---~~~~-~------~p~hls~~-~~---~~------------------ 165 (220)
.|++.| ++|+++|.|.|.++.++.... .+.. . ++..+... .. ..
T Consensus 78 ~~~~~a----~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (234)
T cd06421 78 NALAHT----TGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRD 153 (234)
T ss_pred HHHHhC----CCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHh
Confidence 888876 899999999999998874211 1111 0 11111100 00 00
Q ss_pred CCCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 166 KYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 166 ~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
........|+.++++|+.|.++|||++.+. +||.|+..|+..+|.++...
T Consensus 154 ~~~~~~~~g~~~~~r~~~~~~ig~~~~~~~---~eD~~l~~r~~~~g~~i~~~ 203 (234)
T cd06421 154 RWGAAFCCGSGAVVRREALDEIGGFPTDSV---TEDLATSLRLHAKGWRSVYV 203 (234)
T ss_pred hcCCceecCceeeEeHHHHHHhCCCCccce---eccHHHHHHHHHcCceEEEe
Confidence 001223467899999999999999998654 59999999999999998643
No 26
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.29 E-value=6.7e-11 Score=110.76 Aligned_cols=146 Identities=12% Similarity=0.093 Sum_probs=99.8
Q ss_pred CCcceEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC-----------------------cccccchhhh
Q psy18177 62 DQHELCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS-----------------------YRFNRGSLIN 117 (220)
Q Consensus 62 ~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~-----------------------~~FnR~~~lN 117 (220)
...++|||||.||.++.+..+++++. +|. .+++|+|++++++ ..-.|+.++|
T Consensus 73 ~~p~vsViIP~yNE~~~i~~~l~sll----~q~yp~~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~n~Gka~AlN 148 (444)
T PRK14583 73 GHPLVSILVPCFNEGLNARETIHAAL----AQTYTNIEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAHNQGKAIALR 148 (444)
T ss_pred CCCcEEEEEEeCCCHHHHHHHHHHHH----cCCCCCeEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCCCCCHHHHHH
Confidence 45689999999999999999888853 343 3689998875321 1223556889
Q ss_pred hhHHHhhhcCCCceEEEeccccccCCCCcccc------CCCC-----ceeeeecC---------CCCC--------CCCc
Q psy18177 118 VGFLYIQENTHCDFIAMHDVDLIPINPRLNYS------YPGD-----AIMHIAAP---------DLHP--------KYHY 169 (220)
Q Consensus 118 ~G~~~A~~~~~~D~lif~DvDlip~~~~~~y~------~~~~-----~p~hls~~---------~~~~--------~~~~ 169 (220)
.|++.| ++|++++.|.|.+++++..... .++. .|...... ++.. ...+
T Consensus 149 ~gl~~a----~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 224 (444)
T PRK14583 149 MGAAAA----RSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRTRSTLIGRVQVGEFSSIIGLIKRTQRVY 224 (444)
T ss_pred HHHHhC----CCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecCCCcchhhHHHHHHHHHHHHHHHHHHHh
Confidence 998876 8999999999999998853211 1110 01100000 0000 0001
Q ss_pred c---cccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 170 K---TFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 170 ~---~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
. ...|++.++.|+.+.++||||++.. .||.|+..|+..+|.++.-.
T Consensus 225 g~~~~~sG~~~~~rr~al~~vGg~~~~~i---~ED~dl~~rl~~~G~~i~~~ 273 (444)
T PRK14583 225 GQVFTVSGVVAAFRRRALADVGYWSPDMI---TEDIDISWKLQLKHWSVFFE 273 (444)
T ss_pred CCceEecCceeEEEHHHHHHcCCCCCCcc---cccHHHHHHHHHcCCeEEEe
Confidence 1 1246778899999999999999875 59999999999999998643
No 27
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.27 E-value=3.3e-11 Score=101.45 Aligned_cols=143 Identities=14% Similarity=0.111 Sum_probs=95.5
Q ss_pred EEEEEecCCH-HHHHHHHHHHHHHhhhcC-cceeEEEEEeccC---------------------------cccccchhhh
Q psy18177 67 CLIIPFRDRF-DELLIFLMHMKVFLERQN-IVYNVYVVNQVDS---------------------------YRFNRGSLIN 117 (220)
Q Consensus 67 sVIIP~r~R~-~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~---------------------------~~FnR~~~lN 117 (220)
|||||+||.. +.|..+|+++. +|. .+++|+|+++... .++ ++.++|
T Consensus 1 siiip~~ne~~~~l~~~l~sl~----~q~~~~~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~~G~-~~~a~n 75 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLA----ALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLPGA-KAGALN 75 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHH----hCCCCCcEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCC-chHHHH
Confidence 6999999987 78999998863 454 3578888875321 111 456789
Q ss_pred hhHHHhhhcCCCceEEEeccccccCCCCccc---cCCCCc------eeeeecCC---------CCC------CC------
Q psy18177 118 VGFLYIQENTHCDFIAMHDVDLIPINPRLNY---SYPGDA------IMHIAAPD---------LHP------KY------ 167 (220)
Q Consensus 118 ~G~~~A~~~~~~D~lif~DvDlip~~~~~~y---~~~~~~------p~hls~~~---------~~~------~~------ 167 (220)
.|++.| ..++|+++|+|.|.++.++.+.. .+.... +..+.... +.. ..
T Consensus 76 ~g~~~a--~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (236)
T cd06435 76 YALERT--APDAEIIAVIDADYQVEPDWLKRLVPIFDDPRVGFVQAPQDYRDGEESLFKRMCYAEYKGFFDIGMVSRNER 153 (236)
T ss_pred HHHHhc--CCCCCEEEEEcCCCCcCHHHHHHHHHHhcCCCeeEEecCccccCCCccHHHHHHhHHHHHHHHHHhcccccc
Confidence 999987 34589999999999988875311 111100 00000000 000 00
Q ss_pred CcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCCC
Q psy18177 168 HYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPE 219 (220)
Q Consensus 168 ~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~ 219 (220)
......|..+++.|+.|.++||||+.+ ..||.||..|+...|.++...+
T Consensus 154 ~~~~~~g~~~~~rr~~~~~iGgf~~~~---~~eD~dl~~r~~~~G~~~~~~~ 202 (236)
T cd06435 154 NAIIQHGTMCLIRRSALDDVGGWDEWC---ITEDSELGLRMHEAGYIGVYVA 202 (236)
T ss_pred CceEEecceEEEEHHHHHHhCCCCCcc---ccchHHHHHHHHHCCcEEEEcc
Confidence 001134666789999999999999987 3799999999999999987543
No 28
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.26 E-value=1.7e-11 Score=102.49 Aligned_cols=143 Identities=20% Similarity=0.205 Sum_probs=80.4
Q ss_pred ceEEEEEecCCHHHHHHHHHHHHHHhhhc-CcceeEEEEEeccCc-----------------------cc-----ccchh
Q psy18177 65 ELCLIIPFRDRFDELLIFLMHMKVFLERQ-NIVYNVYVVNQVDSY-----------------------RF-----NRGSL 115 (220)
Q Consensus 65 kvsVIIP~r~R~~~L~~~L~~l~~~L~~q-~~~~~I~Vveq~~~~-----------------------~F-----nR~~~ 115 (220)
+|+||||.||+.+.|...|.++. +| ..+++|+|+++..++ +- .|+.+
T Consensus 2 ~v~Vvip~~~~~~~l~~~l~sl~----~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a 77 (228)
T PF13641_consen 2 RVSVVIPAYNEDDVLRRCLESLL----AQDYPRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNPGPGGKARA 77 (228)
T ss_dssp -EEEE--BSS-HHHHHHHHHHHT----TSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----HHHHHHHHH
T ss_pred EEEEEEEecCCHHHHHHHHHHHH----cCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCCCcchHHHH
Confidence 59999999999999999998864 33 246888887743210 00 13456
Q ss_pred hhhhHHHhhhcCCCceEEEeccccccCCCCcc-----ccCCCC---c-ee-------eee--cC-CC---CC-------C
Q psy18177 116 INVGFLYIQENTHCDFIAMHDVDLIPINPRLN-----YSYPGD---A-IM-------HIA--AP-DL---HP-------K 166 (220)
Q Consensus 116 lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~-----y~~~~~---~-p~-------hls--~~-~~---~~-------~ 166 (220)
+|.|++.+ ++|+++|.|.|.++.++... ...++. + +. .++ .. .+ +. .
T Consensus 78 ~n~~~~~~----~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (228)
T PF13641_consen 78 LNEALAAA----RGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDRNWLTRLQDLFFARWHLRFRSGRRA 153 (228)
T ss_dssp HHHHHHH-------SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCCCEEEE-TT--S-EETTTS-TT-B-
T ss_pred HHHHHHhc----CCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCCCHHHHHHHHHHhhhhhhhhhhhcc
Confidence 67777766 79999999999999876421 111111 0 00 111 00 00 00 0
Q ss_pred CCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 167 YHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 167 ~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
.......|+.+++.|+.|.++||||+ ...+||.|+..|+..+|+++...
T Consensus 154 ~~~~~~~G~~~~~rr~~~~~~g~fd~---~~~~eD~~l~~r~~~~G~~~~~~ 202 (228)
T PF13641_consen 154 LGVAFLSGSGMLFRRSALEEVGGFDP---FILGEDFDLCLRLRAAGWRIVYA 202 (228)
T ss_dssp ---S-B--TEEEEEHHHHHHH-S--S---SSSSHHHHHHHHHHHTT--EEEE
T ss_pred cceeeccCcEEEEEHHHHHHhCCCCC---CCcccHHHHHHHHHHCCCcEEEE
Confidence 11122468899999999999999999 33459999999999999998643
No 29
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.25 E-value=4.6e-11 Score=99.01 Aligned_cols=140 Identities=15% Similarity=0.164 Sum_probs=92.4
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhcC-cc--eeEEEEEeccCc------------------------ccc--cchhhhh
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQN-IV--YNVYVVNQVDSY------------------------RFN--RGSLINV 118 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q~-~~--~~I~Vveq~~~~------------------------~Fn--R~~~lN~ 118 (220)
||||+||+.+.|..+|.++. .|. .. ++|+|+++.++. +.+ ++.++|.
T Consensus 1 viip~~n~~~~l~~~l~sl~----~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~~~~~g~~~a~n~ 76 (229)
T cd04192 1 VVIAARNEAENLPRLLQSLS----ALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSRVSISGKKNALTT 76 (229)
T ss_pred CEEEecCcHHHHHHHHHHHH----hCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccCcccchhHHHHHH
Confidence 69999999999999999863 343 23 789888753210 122 3356788
Q ss_pred hHHHhhhcCCCceEEEeccccccCCCCccc--c-CCCC------ceeeeec-CCC----C--------------CCCCc-
Q psy18177 119 GFLYIQENTHCDFIAMHDVDLIPINPRLNY--S-YPGD------AIMHIAA-PDL----H--------------PKYHY- 169 (220)
Q Consensus 119 G~~~A~~~~~~D~lif~DvDlip~~~~~~y--~-~~~~------~p~hls~-~~~----~--------------~~~~~- 169 (220)
|+..| ++|+++|.|.|.++.++.... . +... ++..... ..+ . .....
T Consensus 77 g~~~~----~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (229)
T cd04192 77 AIKAA----KGDWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVAGPVIYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKP 152 (229)
T ss_pred HHHHh----cCCEEEEECCCcccCHHHHHHHHHHhhcCCCcEEeeeeeecCCccHHHHHHHHHHHHHHHHHhhHHHhcCc
Confidence 88776 899999999999998875311 0 0000 1111110 000 0 00001
Q ss_pred ccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCC-eEe
Q psy18177 170 KTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARI-RIE 216 (220)
Q Consensus 170 ~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~-~i~ 216 (220)
....|+.+++.|+.|.++||||+.+.- ..||+|+..|+..+|. ++.
T Consensus 153 ~~~~g~~~~~rr~~~~~~ggf~~~~~~-~~eD~~~~~~~~~~g~~~~~ 199 (229)
T cd04192 153 FMCNGANMAYRKEAFFEVGGFEGNDHI-ASGDDELLLAKVASKYPKVA 199 (229)
T ss_pred cccccceEEEEHHHHHHhcCCcccccc-ccCCHHHHHHHHHhCCCCEE
Confidence 123577789999999999999987553 4599999999999999 653
No 30
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.20 E-value=1.1e-10 Score=106.82 Aligned_cols=147 Identities=15% Similarity=0.134 Sum_probs=93.2
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccCc---------------------------ccc-cc
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDSY---------------------------RFN-RG 113 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~~---------------------------~Fn-R~ 113 (220)
..+||||||.||.+++|..+|+++. +|. .++||++++++.++ ++| |.
T Consensus 40 ~p~VSViiP~~nee~~l~~~L~Sl~----~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K~ 115 (373)
T TIGR03472 40 WPPVSVLKPLHGDEPELYENLASFC----RQDYPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHGPNRKV 115 (373)
T ss_pred CCCeEEEEECCCCChhHHHHHHHHH----hcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCCCChHH
Confidence 5679999999999999999999863 454 35899887653221 111 11
Q ss_pred hhhhhhHHHhhhcCCCceEEEeccccccCCCCccc---cC--CCCc-----ee-----ee-e---c----CCCCC-----
Q psy18177 114 SLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNY---SY--PGDA-----IM-----HI-A---A----PDLHP----- 165 (220)
Q Consensus 114 ~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y---~~--~~~~-----p~-----hl-s---~----~~~~~----- 165 (220)
.+++.++++ +++|+++|.|.|++++++...- .. ++.+ +. .+ + . ..+.+
T Consensus 116 ~~l~~~~~~----a~ge~i~~~DaD~~~~p~~L~~lv~~~~~~~v~~V~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 191 (373)
T TIGR03472 116 SNLINMLPH----ARHDILVIADSDISVGPDYLRQVVAPLADPDVGLVTCLYRGRPVPGFWSRLGAMGINHNFLPSVMVA 191 (373)
T ss_pred HHHHHHHHh----ccCCEEEEECCCCCcChhHHHHHHHHhcCCCcceEeccccCCCCCCHHHHHHHHHhhhhhhHHHHHH
Confidence 122334444 4999999999999998875210 11 1100 00 00 0 0 00000
Q ss_pred -CCC-cccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 166 -KYH-YKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 166 -~~~-~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
... .....|.++++.|+.|+++|||++...-. .||.|+..|+..+|.++.-.
T Consensus 192 ~~~~~~~~~~G~~~a~RR~~l~~iGGf~~~~~~~-~ED~~l~~~i~~~G~~v~~~ 245 (373)
T TIGR03472 192 RALGRARFCFGATMALRRATLEAIGGLAALAHHL-ADDYWLGELVRALGLRVVLA 245 (373)
T ss_pred HhccCCccccChhhheeHHHHHHcCChHHhcccc-hHHHHHHHHHHHcCCeEEec
Confidence 001 11245777899999999999999743323 49999999999999998644
No 31
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.16 E-value=1.8e-10 Score=97.84 Aligned_cols=150 Identities=15% Similarity=0.132 Sum_probs=98.4
Q ss_pred CCCCcCCCcceEEEEEecCCHHHHHHHHHHHHHHhhhcCc---ceeEEEEEecc---------------------Ccccc
Q psy18177 56 SQSTLHDQHELCLIIPFRDRFDELLIFLMHMKVFLERQNI---VYNVYVVNQVD---------------------SYRFN 111 (220)
Q Consensus 56 ~~~~~~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~---~~~I~Vveq~~---------------------~~~Fn 111 (220)
+.+.....+++|||||+||+.+.|..+|+++. .|.. .++++|+++.. .....
T Consensus 21 ~~~~~~~~~~isVvip~~n~~~~l~~~l~si~----~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~v~~i~~~~~~g 96 (251)
T cd06439 21 SLPDPAYLPTVTIIIPAYNEEAVIEAKLENLL----ALDYPRDRLEIIVVSDGSTDGTAEIAREYADKGVKLLRFPERRG 96 (251)
T ss_pred CCCCCCCCCEEEEEEecCCcHHHHHHHHHHHH----hCcCCCCcEEEEEEECCCCccHHHHHHHHhhCcEEEEEcCCCCC
Confidence 34566677899999999999999999998864 2332 27888876432 12456
Q ss_pred cchhhhhhHHHhhhcCCCceEEEeccccccCCCCcc-----ccCCCC---ceeee--ecCC----------C-------C
Q psy18177 112 RGSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLN-----YSYPGD---AIMHI--AAPD----------L-------H 164 (220)
Q Consensus 112 R~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~-----y~~~~~---~p~hl--s~~~----------~-------~ 164 (220)
++.++|.|++.| ++|+++|.|.|+++.++... +.-+.. .+... .... + .
T Consensus 97 ~~~a~n~gi~~a----~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (251)
T cd06439 97 KAAALNRALALA----TGEIVVFTDANALLDPDALRLLVRHFADPSVGAVSGELVIVDGGGSGSGEGLYWKYENWLKRAE 172 (251)
T ss_pred hHHHHHHHHHHc----CCCEEEEEccccCcCHHHHHHHHHHhcCCCccEEEeEEEecCCcccchhHHHHHHHHHHHHHHH
Confidence 778899999987 78999999999999876421 110000 00000 0000 0 0
Q ss_pred CCC-CcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCCC
Q psy18177 165 PKY-HYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPE 219 (220)
Q Consensus 165 ~~~-~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~ 219 (220)
... ......|+.+++.|+-|. ||++.. +.||.++..|+...|.++...+
T Consensus 173 ~~~~~~~~~~g~~~~~rr~~~~---~~~~~~---~~eD~~l~~~~~~~G~~~~~~~ 222 (251)
T cd06439 173 SRLGSTVGANGAIYAIRRELFR---PLPADT---INDDFVLPLRIARQGYRVVYEP 222 (251)
T ss_pred HhcCCeeeecchHHHhHHHHhc---CCCccc---chhHHHHHHHHHHcCCeEEecc
Confidence 000 112245566667777776 776654 3599999999999999886554
No 32
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=99.13 E-value=3.9e-10 Score=111.83 Aligned_cols=148 Identities=15% Similarity=0.248 Sum_probs=98.4
Q ss_pred CcCCCcceEEEEEecCCHHHH-HHHHHHHHHHhhhcCc---ceeEEEEEeccC---------------------------
Q psy18177 59 TLHDQHELCLIIPFRDRFDEL-LIFLMHMKVFLERQNI---VYNVYVVNQVDS--------------------------- 107 (220)
Q Consensus 59 ~~~~~~kvsVIIP~r~R~~~L-~~~L~~l~~~L~~q~~---~~~I~Vveq~~~--------------------------- 107 (220)
+.....+|+||||+||.+.++ +..+.+. ..|.. .++|+|+++++.
T Consensus 126 ~~~~~P~VsViIP~yNE~~~iv~~tl~s~----~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~ 201 (713)
T TIGR03030 126 DPEEWPTVDVFIPTYNEDLEIVATTVLAA----KNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRK 201 (713)
T ss_pred CcccCCeeEEEEcCCCCCHHHHHHHHHHH----HhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHH
Confidence 334456899999999998655 5677663 33432 489999986521
Q ss_pred ----------cccccchhhhhhHHHhhhcCCCceEEEeccccccCCCCccc----c--CCCC----ceeeeecCC-CC--
Q psy18177 108 ----------YRFNRGSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNY----S--YPGD----AIMHIAAPD-LH-- 164 (220)
Q Consensus 108 ----------~~FnR~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y----~--~~~~----~p~hls~~~-~~-- 164 (220)
..-.|+.++|.|++.| ++|++++.|+|.+|.+++..- - -++. .|.++..+. +.
T Consensus 202 ~~v~yi~r~~n~~~KAgnLN~al~~a----~gd~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vqtp~~f~~p~~~~~n 277 (713)
T TIGR03030 202 LGVNYITRPRNVHAKAGNINNALKHT----DGELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQTPHFFVSPDPIERN 277 (713)
T ss_pred cCcEEEECCCCCCCChHHHHHHHHhc----CCCEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEeCCeeccCCCHHhhh
Confidence 0122556788998877 899999999999999886311 1 1110 122111000 00
Q ss_pred -------C---------------CCCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeC
Q psy18177 165 -------P---------------KYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIER 217 (220)
Q Consensus 165 -------~---------------~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R 217 (220)
+ ......+.|.+..+.|+.++++|||++... .||.|+..|+..+|+++..
T Consensus 278 l~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~iGGf~~~~v---tED~~l~~rL~~~G~~~~y 349 (713)
T TIGR03030 278 LGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDEIGGIAGETV---TEDAETALKLHRRGWNSAY 349 (713)
T ss_pred hHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHHcCCCCCCCc---CcHHHHHHHHHHcCCeEEE
Confidence 0 000112457778899999999999998654 6999999999999999753
No 33
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.07 E-value=9.1e-10 Score=98.09 Aligned_cols=148 Identities=20% Similarity=0.292 Sum_probs=100.8
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcce------------------------eEEEEEeccCcccccchhhhh
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVY------------------------NVYVVNQVDSYRFNRGSLINV 118 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~------------------------~I~Vveq~~~~~FnR~~~lN~ 118 (220)
.+++++||+.|||.+.|..+|..+. .|..+. .|.+++-.++.+| |.+-|.
T Consensus 2 ~~~i~~iiv~yn~~~~l~~~l~~l~----~~~~~~~~iv~vDn~s~d~~~~~~~~~~~~~v~~i~~~~NlG~--agg~n~ 75 (305)
T COG1216 2 MPKISIIIVTYNRGEDLVECLASLA----AQTYPDDVIVVVDNGSTDGSLEALKARFFPNVRLIENGENLGF--AGGFNR 75 (305)
T ss_pred CcceEEEEEecCCHHHHHHHHHHHh----cCCCCCcEEEEccCCCCCCCHHHHHhhcCCcEEEEEcCCCccc--hhhhhH
Confidence 5689999999999999999999864 443222 2333333345566 667899
Q ss_pred hHHHhhhcCCCc-eEEEeccccccCCCCcc----c--cCCCC---ceeeee--------cC---------------CCCC
Q psy18177 119 GFLYIQENTHCD-FIAMHDVDLIPINPRLN----Y--SYPGD---AIMHIA--------AP---------------DLHP 165 (220)
Q Consensus 119 G~~~A~~~~~~D-~lif~DvDlip~~~~~~----y--~~~~~---~p~hls--------~~---------------~~~~ 165 (220)
|++.|+ ++++ |+++.+-|.++.++.+. + ..+.. ++.... .. ....
T Consensus 76 g~~~a~--~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (305)
T COG1216 76 GIKYAL--AKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRRGGESDGLTGGWRASPLLEI 153 (305)
T ss_pred HHHHHh--cCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchheeccccccccccceecccccc
Confidence 999994 3444 89999999887776421 0 00000 111110 00 0000
Q ss_pred C------CCcc-cccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCCC
Q psy18177 166 K------YHYK-TFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPE 219 (220)
Q Consensus 166 ~------~~~~-~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~ 219 (220)
. .... .+.|+.+++.++.|.+||||||.|--+. ||+|+..|+..+|+++.-.|
T Consensus 154 ~~~~~~~~~~~~~~~G~~~li~~~~~~~vG~~de~~F~y~-eD~D~~~R~~~~G~~i~~~p 213 (305)
T COG1216 154 APDLSSYLEVVASLSGACLLIRREAFEKVGGFDERFFIYY-EDVDLCLRARKAGYKIYYVP 213 (305)
T ss_pred cccccchhhhhhhcceeeeEEcHHHHHHhCCCCcccceee-hHHHHHHHHHHcCCeEEEee
Confidence 0 0112 2678899999999999999999999988 99999999999999987554
No 34
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.05 E-value=3.2e-09 Score=92.42 Aligned_cols=148 Identities=10% Similarity=0.003 Sum_probs=91.7
Q ss_pred cceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCc-------------c--------cccchhhhhhHHH
Q psy18177 64 HELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSY-------------R--------FNRGSLINVGFLY 122 (220)
Q Consensus 64 ~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~-------------~--------FnR~~~lN~G~~~ 122 (220)
+++|||||+||..+.|..+|.++....++...++||+|++....+ + -..+.++|.|++.
T Consensus 1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~~~~~i~~i~~~~~G~~~A~N~Gi~~ 80 (248)
T PRK10063 1 MLLSVITVAFRNLEGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLNGIFNLRFVSEPDNGIYDAMNKGIAM 80 (248)
T ss_pred CeEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhcccCCEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999986543333457899998753210 0 1234789999998
Q ss_pred hhhcCCCceEEEeccccccCCCCc--cccCCCCc-------eeeeecCCC----CCCCC-c---cc-c-cccccccchhh
Q psy18177 123 IQENTHCDFIAMHDVDLIPINPRL--NYSYPGDA-------IMHIAAPDL----HPKYH-Y---KT-F-LGGILMMKNEH 183 (220)
Q Consensus 123 A~~~~~~D~lif~DvDlip~~~~~--~y~~~~~~-------p~hls~~~~----~~~~~-~---~~-~-~GG~~~i~ked 183 (220)
| ++|+++|.|.|-+.+++.. ........ ......... ....+ + .. . .+..+.+.++-
T Consensus 81 a----~g~~v~~ld~DD~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (248)
T PRK10063 81 A----QGRFALFLNSGDIFHQDAANFVRQLKMQKDNAMIIGDALLDFGDGHKIKRSAKPGWYIYHSLPASHQAIFFPVSG 156 (248)
T ss_pred c----CCCEEEEEeCCcccCcCHHHHHHHHHhCCCCeEEEeeeEEEcCCCcEEEEccCChhHHhcCCCCCCcEEEEEHHH
Confidence 8 8999999998888776531 11111100 111000000 00001 0 11 1 12223345555
Q ss_pred hhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 184 FQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 184 f~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
+ +.+|||+.+. -.||-|+..|+..+|.++...
T Consensus 157 ~-~~~~fd~~~~--~~~Dydl~lrl~~~g~~~~~v 188 (248)
T PRK10063 157 L-KKWRYDLQYK--VSSDYALAARLYKAGYAFKKL 188 (248)
T ss_pred H-hcCCCCcccc--hHHhHHHHHHHHHcCCcEEEc
Confidence 5 5689999874 359999999999999877653
No 35
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=99.05 E-value=2.6e-09 Score=107.67 Aligned_cols=145 Identities=14% Similarity=0.225 Sum_probs=95.9
Q ss_pred CCCcceEEEEEecCCHHH-HHHHHHHHHHHhhhcC---cceeEEEEEeccCc-------------------ccccchhhh
Q psy18177 61 HDQHELCLIIPFRDRFDE-LLIFLMHMKVFLERQN---IVYNVYVVNQVDSY-------------------RFNRGSLIN 117 (220)
Q Consensus 61 ~~~~kvsVIIP~r~R~~~-L~~~L~~l~~~L~~q~---~~~~I~Vveq~~~~-------------------~FnR~~~lN 117 (220)
....+|+||||+||-+.+ ++..+... + .|. -+++|+|+++++.+ .-.|+.++|
T Consensus 257 ~~~P~VsViIPtYNE~~~vv~~tI~a~---l-~~dYP~~k~EViVVDDgS~D~t~~la~~~~v~yI~R~~n~~gKAGnLN 332 (852)
T PRK11498 257 SLWPTVDIFVPTYNEDLNVVKNTIYAS---L-GIDWPKDKLNIWILDDGGREEFRQFAQEVGVKYIARPTHEHAKAGNIN 332 (852)
T ss_pred CCCCcEEEEEecCCCcHHHHHHHHHHH---H-hccCCCCceEEEEEeCCCChHHHHHHHHCCcEEEEeCCCCcchHHHHH
Confidence 334689999999998754 45555443 2 233 24889999864321 112456678
Q ss_pred hhHHHhhhcCCCceEEEeccccccCCCCcc----c--cCCCC----ceeeeecC-----------CCCC--C--C-----
Q psy18177 118 VGFLYIQENTHCDFIAMHDVDLIPINPRLN----Y--SYPGD----AIMHIAAP-----------DLHP--K--Y----- 167 (220)
Q Consensus 118 ~G~~~A~~~~~~D~lif~DvDlip~~~~~~----y--~~~~~----~p~hls~~-----------~~~~--~--~----- 167 (220)
.|++.| ++|++++.|+|.+|++++.. + .-++. .|.++..+ .... . +
T Consensus 333 ~aL~~a----~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~ 408 (852)
T PRK11498 333 NALKYA----KGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQD 408 (852)
T ss_pred HHHHhC----CCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEEcceeccCCchHHHhhHHHhhcccchhHHHHHHHh
Confidence 898877 89999999999999988632 1 11111 12222100 0000 0 0
Q ss_pred -----CcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEe
Q psy18177 168 -----HYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIE 216 (220)
Q Consensus 168 -----~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~ 216 (220)
....+.|.+.++.|+.++++||||++.. .||.|+..|+..+|+++.
T Consensus 409 g~~~~~a~~~~Gs~aviRReaLeeVGGfd~~ti---tED~dlslRL~~~Gyrv~ 459 (852)
T PRK11498 409 GNDMWDATFFCGSCAVIRRKPLDEIGGIAVETV---TEDAHTSLRLHRRGYTSA 459 (852)
T ss_pred HHHhhcccccccceeeeEHHHHHHhcCCCCCcc---CccHHHHHHHHHcCCEEE
Confidence 0122567788899999999999998753 599999999999999875
No 36
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.04 E-value=1.5e-09 Score=101.72 Aligned_cols=146 Identities=14% Similarity=0.195 Sum_probs=95.3
Q ss_pred CCCcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcc---eeEEEEEeccC-----------------------cccccch
Q psy18177 61 HDQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIV---YNVYVVNQVDS-----------------------YRFNRGS 114 (220)
Q Consensus 61 ~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~---~~I~Vveq~~~-----------------------~~FnR~~ 114 (220)
...+++|||||.||.++.|..+++++. +|..+ ++|+|+++.+. ..-.++.
T Consensus 46 ~~~P~vsVIIP~yNe~~~l~~~l~sl~----~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~v~~~~~~~Gka~ 121 (439)
T TIGR03111 46 GKLPDITIIIPVYNSEDTLFNCIESIY----NQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLSLRYMNSDQGKAK 121 (439)
T ss_pred CCCCCEEEEEEeCCChHHHHHHHHHHH----hcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeEEEEeCCCCCHHH
Confidence 345689999999999999999999863 45433 57888764311 1123567
Q ss_pred hhhhhHHHhhhcCCCceEEEeccccccCCCCccc---cC---CCC---ceeeeecC----C-------CCCC-----C--
Q psy18177 115 LINVGFLYIQENTHCDFIAMHDVDLIPINPRLNY---SY---PGD---AIMHIAAP----D-------LHPK-----Y-- 167 (220)
Q Consensus 115 ~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y---~~---~~~---~p~hls~~----~-------~~~~-----~-- 167 (220)
++|.|++.| ++|++++.|.|.+++++.... .+ ++. +....... . ...+ +
T Consensus 122 AlN~gl~~s----~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 197 (439)
T TIGR03111 122 ALNAAIYNS----IGKYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILTDKELIEKTKGRFLKLIRRCEYFEYAQ 197 (439)
T ss_pred HHHHHHHHc----cCCEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEecCchhhhhhcchhhhHhHHhHHHHHHH
Confidence 889999877 899999999999998875211 01 100 00001000 0 0000 0
Q ss_pred ------Cc-------ccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHH-CCCeEeC
Q psy18177 168 ------HY-------KTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKE-ARIRIER 217 (220)
Q Consensus 168 ------~~-------~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~-~G~~i~R 217 (220)
+. ....|+..++.|+.+.++||||+... +||.|+..|+.. .|.++.-
T Consensus 198 ~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~vggf~~~~i---~ED~~l~~rl~~~~g~kv~~ 258 (439)
T TIGR03111 198 AFLAGRNFESQVNSLFTLSGAFSAFRRETILKTQLYNSETV---GEDTDMTFQIRELLDGKVYL 258 (439)
T ss_pred HHHhhhHHHHhcCCeEEEccHHHhhhHHHHHHhCCCCCCCc---CccHHHHHHHHHhcCCeEEE
Confidence 00 01235556799999999999998764 699999999964 5777653
No 37
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.04 E-value=3.5e-09 Score=94.12 Aligned_cols=141 Identities=14% Similarity=0.168 Sum_probs=89.4
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC--------------c-------cccc--chhhhh
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS--------------Y-------RFNR--GSLINV 118 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~--------------~-------~FnR--~~~lN~ 118 (220)
.+.||||||+||+++.|...|.++. .|. .++||+|+++... . +-|. +.++|.
T Consensus 4 ~p~VSVIip~yN~~~~l~~~l~Svl----~Qt~~~~EiIVVDDgS~~~~~~~~~~~~~~~~ri~~i~~~~n~G~~~a~N~ 79 (279)
T PRK10018 4 NPLISIYMPTWNRQQLAIRAIKSVL----RQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQ 79 (279)
T ss_pred CCEEEEEEEeCCCHHHHHHHHHHHH----hCCCCCeEEEEEECCCCCHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHH
Confidence 4679999999999999988888753 344 4689999986322 0 1133 466889
Q ss_pred hHHHhhhcCCCceEEEeccccccCCCCcc----c---------cCCCCce---eeeecCCCC---CCCC-------cccc
Q psy18177 119 GFLYIQENTHCDFIAMHDVDLIPINPRLN----Y---------SYPGDAI---MHIAAPDLH---PKYH-------YKTF 172 (220)
Q Consensus 119 G~~~A~~~~~~D~lif~DvDlip~~~~~~----y---------~~~~~~p---~hls~~~~~---~~~~-------~~~~ 172 (220)
|+..| ++|+++|.|.|....++... + .+..... ......... +..+ ...+
T Consensus 80 gi~~a----~g~~I~~lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~n~ 155 (279)
T PRK10018 80 AIMLA----QGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNI 155 (279)
T ss_pred HHHHc----CCCEEEEECCCCCCCccHHHHHHHHHHhCCCccEEEccceeecCcccccccccCCCCCCCCCHHHHHHhcC
Confidence 98877 99999999999988776421 0 0100000 000000000 1111 1345
Q ss_pred cccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCe
Q psy18177 173 LGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIR 214 (220)
Q Consensus 173 ~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~ 214 (220)
+|..+...+.. .+.+|||+.+. ..||.||..|+...|-.
T Consensus 156 ig~~~~~~~~~-~~~~~fd~~~~--~~eDydlwlrl~~~~~~ 194 (279)
T PRK10018 156 IGNQVFTWAWR-FKECLFDTELK--AAQDYDIFLRMVVEYGE 194 (279)
T ss_pred cCceeeehhhh-hhhcccCCCCC--ccccHHHHHHHHHhcCc
Confidence 56555444444 45678999987 57999999999877644
No 38
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.02 E-value=1.4e-09 Score=93.09 Aligned_cols=150 Identities=16% Similarity=0.179 Sum_probs=99.1
Q ss_pred CCcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccC-------------------------cccccchhh
Q psy18177 62 DQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDS-------------------------YRFNRGSLI 116 (220)
Q Consensus 62 ~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~-------------------------~~FnR~~~l 116 (220)
+.++++||||.||..+.|..++..+...++.. .+++|+|+++.+. ..+.++.++
T Consensus 7 ~~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~-~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n~G~~~a~ 85 (243)
T PLN02726 7 GAMKYSIIVPTYNERLNIALIVYLIFKALQDV-KDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLGLGTAY 85 (243)
T ss_pred CCceEEEEEccCCchhhHHHHHHHHHHHhccC-CCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCCCCHHHHH
Confidence 35689999999999999999998876544322 2789999875321 123456788
Q ss_pred hhhHHHhhhcCCCceEEEeccccccCCCCccc--c-C--CCC----ceeeeecCCCC--------------------CCC
Q psy18177 117 NVGFLYIQENTHCDFIAMHDVDLIPINPRLNY--S-Y--PGD----AIMHIAAPDLH--------------------PKY 167 (220)
Q Consensus 117 N~G~~~A~~~~~~D~lif~DvDlip~~~~~~y--~-~--~~~----~p~hls~~~~~--------------------~~~ 167 (220)
|.|++.| ++|+++|.|.|..+.++.... . . .+. +.+.......+ ...
T Consensus 86 n~g~~~a----~g~~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 161 (243)
T PLN02726 86 IHGLKHA----SGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLLWP 161 (243)
T ss_pred HHHHHHc----CCCEEEEEcCCCCCCHHHHHHHHHHHHhcCCcEEEEccccCCCCcCCccHHHHHHHHHHHHHHHHHhCC
Confidence 8888877 899999999999877654210 0 0 000 00000000000 001
Q ss_pred CcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 168 HYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 168 ~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
+.....||..+++|+-+.+++++.+.. ||. +|.|+..|+..+|+++...
T Consensus 162 ~~~d~~g~~~~~rr~~~~~i~~~~~~~-~~~-~~~el~~~~~~~g~~i~~v 210 (243)
T PLN02726 162 GVSDLTGSFRLYKRSALEDLVSSVVSK-GYV-FQMEIIVRASRKGYRIEEV 210 (243)
T ss_pred CCCcCCCcccceeHHHHHHHHhhccCC-CcE-EehHHHHHHHHcCCcEEEe
Confidence 122346778889999999998765532 444 6899999999999988653
No 39
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.02 E-value=2e-09 Score=90.13 Aligned_cols=143 Identities=15% Similarity=0.120 Sum_probs=92.5
Q ss_pred ceEEEEEecCCH-HHHHHHHHHHHHHhhhcCcceeEEEEEeccC---------------------cccccchhhhhhHHH
Q psy18177 65 ELCLIIPFRDRF-DELLIFLMHMKVFLERQNIVYNVYVVNQVDS---------------------YRFNRGSLINVGFLY 122 (220)
Q Consensus 65 kvsVIIP~r~R~-~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~---------------------~~FnR~~~lN~G~~~ 122 (220)
+|+||||.||+. +.|..+|+++. +|. +++|+|+++..+ ..-.++.++|.|++.
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~----~q~-~~eiivvdd~s~d~~~~~l~~~~~~~~~~v~~~~~~g~~~a~n~g~~~ 75 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSIL----RQK-PLEIIVVTDGDDEPYLSILSQTVKYGGIFVITVPHPGKRRALAEGIRH 75 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHH----hCC-CCEEEEEeCCCChHHHHHHHhhccCCcEEEEecCCCChHHHHHHHHHH
Confidence 489999999999 99999999864 455 788888875322 133456788899887
Q ss_pred hhhcCCCceEEEeccccccCCCCcc--c-cCCCC-----ce-eee-ec--CCC--------C---C-------CCC-ccc
Q psy18177 123 IQENTHCDFIAMHDVDLIPINPRLN--Y-SYPGD-----AI-MHI-AA--PDL--------H---P-------KYH-YKT 171 (220)
Q Consensus 123 A~~~~~~D~lif~DvDlip~~~~~~--y-~~~~~-----~p-~hl-s~--~~~--------~---~-------~~~-~~~ 171 (220)
| ++|+++|.|.|+++.++... . .+... ++ ... .. ..+ . . ... ...
T Consensus 76 a----~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (235)
T cd06434 76 V----TTDIVVLLDSDTVWPPNALPEMLKPFEDPKVGGVGTNQRILRPRDSKWSFLAAEYLERRNEEIRAAMSYDGGVPC 151 (235)
T ss_pred h----CCCEEEEECCCceeChhHHHHHHHhccCCCEeEEcCceEeecCcccHHHHHHHHHHHHHHHHHHHHHhhCCCEEE
Confidence 7 89999999999999987521 0 11010 00 000 00 000 0 0 000 011
Q ss_pred ccccccccchhhhhhcCCCCCCC---cc-----CCCCcHHHHHHHHHCCCeEeC
Q psy18177 172 FLGGILMMKNEHFQTVNGLSNKY---WG-----WGLEDDELYVRIKEARIRIER 217 (220)
Q Consensus 172 ~~GG~~~i~kedf~kVnGfde~f---~G-----WGgED~Dl~~Rl~~~G~~i~R 217 (220)
..|..+++.|+.+.++ ||++.| ++ -.+||.+|..|+...|+++.-
T Consensus 152 ~~G~~~~~rr~~l~~~-~~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~ 204 (235)
T cd06434 152 LSGRTAAYRTEILKDF-LFLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVY 204 (235)
T ss_pred ccCcHHHHHHHHHhhh-hhHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEE
Confidence 2355566777777776 556555 12 257999999999999998754
No 40
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=99.01 E-value=1.4e-09 Score=96.00 Aligned_cols=115 Identities=19% Similarity=0.262 Sum_probs=80.5
Q ss_pred eeEEEEEeccCccccc-chhhhhhHHHhhhcCCCceEEEeccccccCCC-Cccc----c-------C--CCCcee-eeec
Q psy18177 97 YNVYVVNQVDSYRFNR-GSLINVGFLYIQENTHCDFIAMHDVDLIPINP-RLNY----S-------Y--PGDAIM-HIAA 160 (220)
Q Consensus 97 ~~I~Vveq~~~~~FnR-~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~-~~~y----~-------~--~~~~p~-hls~ 160 (220)
+++..+...+.++|.- ++..|.|+..|.++.+++++.|+||||.-..| +... + . +..-|+ |+..
T Consensus 62 ~~~~yl~~~s~~~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~tnI~a~~vlPV~~LNk 141 (346)
T COG4092 62 PRVLYLDFGSPEPFASETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMRTNIDAPLVLPVYHLNK 141 (346)
T ss_pred cceEEEecCCCccccchhhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHHhccCcceeeeeeecch
Confidence 4455555566678987 99999999999777789999999999987754 2110 0 0 001232 4432
Q ss_pred CC----------C-------CC---CCC----cccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHC
Q psy18177 161 PD----------L-------HP---KYH----YKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEA 211 (220)
Q Consensus 161 ~~----------~-------~~---~~~----~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~ 211 (220)
+. + .+ .-. +..+..+...+.|..|.+.|||||+|.|.|-||.||..|+...
T Consensus 142 ~~~~v~f~~~d~f~d~~i~es~~~~~~~~~~ff~~~~T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l~ 216 (346)
T COG4092 142 ADTQVFFDVEDMFLDAMIFESPLAEFRKEDNFFIAPYTNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGLY 216 (346)
T ss_pred hhhhHHHHHHHHhhhhHhhhhHHHHhCcccccccccccceEEEehhHHHHhcCCccccccCCchhHHHHHHHHHH
Confidence 10 0 00 001 1235569999999999999999999999999999999998643
No 41
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=98.99 E-value=2e-09 Score=89.42 Aligned_cols=142 Identities=19% Similarity=0.199 Sum_probs=91.9
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccC-----------------------cccccchhhhhhHHHhh
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDS-----------------------YRFNRGSLINVGFLYIQ 124 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~-----------------------~~FnR~~~lN~G~~~A~ 124 (220)
||||+||+.++|..+|+++..... ..+++|+|+++... .....+.++|.|++.|
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~--~~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~n~G~~~a~n~g~~~a- 77 (224)
T cd06442 1 IIIPTYNERENIPELIERLDAALK--GIDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGKRGLGSAYIEGFKAA- 77 (224)
T ss_pred CeEeccchhhhHHHHHHHHHHhhc--CCCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCCCCChHHHHHHHHHHc-
Confidence 699999999999999999753211 25789999875321 1233457889999987
Q ss_pred hcCCCceEEEeccccccCCCCccc--c--CCCC-----ceeeeecCCCC--------------------CCCCccccccc
Q psy18177 125 ENTHCDFIAMHDVDLIPINPRLNY--S--YPGD-----AIMHIAAPDLH--------------------PKYHYKTFLGG 175 (220)
Q Consensus 125 ~~~~~D~lif~DvDlip~~~~~~y--~--~~~~-----~p~hls~~~~~--------------------~~~~~~~~~GG 175 (220)
.+|+++|.|.|+++.++.... . .... ++......... ...+.....||
T Consensus 78 ---~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (224)
T cd06442 78 ---RGDVIVVMDADLSHPPEYIPELLEAQLEGGADLVIGSRYVEGGGVEGWGLKRKLISRGANLLARLLLGRKVSDPTSG 154 (224)
T ss_pred ---CCCEEEEEECCCCCCHHHHHHHHHHHhcCCCCEEEEeeeecCCccCCCcHHHHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 789999999999887653210 0 1000 11111100000 01122335577
Q ss_pred ccccchhhhhhcCCCCCCCccCC-CCcHHHHHHHHHCCCeEeCC
Q psy18177 176 ILMMKNEHFQTVNGLSNKYWGWG-LEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 176 ~~~i~kedf~kVnGfde~f~GWG-gED~Dl~~Rl~~~G~~i~R~ 218 (220)
.++++|+.+.++| +.+...| .+|.||..|+..+|.++...
T Consensus 155 ~~~~~r~~~~~ig---~~~~~~~~~~~~~l~~~~~~~g~~i~~~ 195 (224)
T cd06442 155 FRAYRREVLEKLI---DSLVSKGYKFQLELLVRARRLGYRIVEV 195 (224)
T ss_pred cchhhHHHHHHHh---hhccCCCcEEeHHHHHHHHHcCCeEEEe
Confidence 8889999999998 2232333 35899999999999988654
No 42
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.96 E-value=6.5e-09 Score=78.59 Aligned_cols=127 Identities=18% Similarity=0.179 Sum_probs=91.7
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEecc-----------------------CcccccchhhhhhHHHh
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVD-----------------------SYRFNRGSLINVGFLYI 123 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~-----------------------~~~FnR~~~lN~G~~~A 123 (220)
||||.+++.+.|...+.++. +|. .+++++++.+.. .....++.++|.|+..+
T Consensus 1 iii~~~~~~~~l~~~l~s~~----~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 76 (156)
T cd00761 1 VIIPAYNEEPYLERCLESLL----AQTYPNFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEENQGLAAARNAGLKAA 76 (156)
T ss_pred CEEeecCcHHHHHHHHHHHH----hCCccceEEEEEeCCCCccHHHHHHHHHhcCCCeEEEEecCCCChHHHHHHHHHHh
Confidence 68999999999999998864 232 467777775432 12456777888888877
Q ss_pred hhcCCCceEEEeccccccCCCCcccc--CCCCce-eeeecCCCCCCCCcccccccccccchhhhhhcCCCCCCCccCCCC
Q psy18177 124 QENTHCDFIAMHDVDLIPINPRLNYS--YPGDAI-MHIAAPDLHPKYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLE 200 (220)
Q Consensus 124 ~~~~~~D~lif~DvDlip~~~~~~y~--~~~~~p-~hls~~~~~~~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgE 200 (220)
++|+++++|.|.++.++..... .....+ ..+.. . .|.++++++.+.+++|+++.+.+| +|
T Consensus 77 ----~~d~v~~~d~D~~~~~~~~~~~~~~~~~~~~~~~v~-------~-----~~~~~~~~~~~~~~~~~~~~~~~~-~e 139 (156)
T cd00761 77 ----RGEYILFLDADDLLLPDWLERLVAELLADPEADAVG-------G-----PGNLLFRRELLEEIGGFDEALLSG-EE 139 (156)
T ss_pred ----cCCEEEEECCCCccCccHHHHHHHHHhcCCCceEEe-------c-----cchheeeHHHHHHhCCcchHhcCC-cc
Confidence 8999999999999887653221 000000 11110 0 088889999999999999998766 79
Q ss_pred cHHHHHHHHHCCCeE
Q psy18177 201 DDELYVRIKEARIRI 215 (220)
Q Consensus 201 D~Dl~~Rl~~~G~~i 215 (220)
|.++..++...|..+
T Consensus 140 d~~~~~~~~~~g~~~ 154 (156)
T cd00761 140 DDDFLLRLLRGGKVA 154 (156)
T ss_pred hHHHHHHHHhhcccc
Confidence 999999999888654
No 43
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=98.91 E-value=7.5e-09 Score=90.26 Aligned_cols=140 Identities=14% Similarity=0.076 Sum_probs=90.4
Q ss_pred ecCC-HHHHHHHHHHHHHHhhhcCcceeEEEEEec--cC-----------------cccc--cchhhhhhHHHhhhcCCC
Q psy18177 72 FRDR-FDELLIFLMHMKVFLERQNIVYNVYVVNQV--DS-----------------YRFN--RGSLINVGFLYIQENTHC 129 (220)
Q Consensus 72 ~r~R-~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~--~~-----------------~~Fn--R~~~lN~G~~~A~~~~~~ 129 (220)
+||| .+.|..++.++. .| .++|+||+.. ++ .+-| -|.++|.|++.|. +.++
T Consensus 2 tyn~~~~~l~~~l~sl~----~q--~~~iiVVDN~S~~~~~~~~~~~~~~~i~~i~~~~N~G~a~a~N~Gi~~a~-~~~~ 74 (281)
T TIGR01556 2 TFNPDLEHLGELITSLP----KQ--VDRIIAVDNSPHSDQPLKNARLRGQKIALIHLGDNQGIAGAQNQGLDASF-RRGV 74 (281)
T ss_pred ccCccHHHHHHHHHHHH----hc--CCEEEEEECcCCCcHhHHHHhccCCCeEEEECCCCcchHHHHHHHHHHHH-HCCC
Confidence 5787 588899988864 34 3578888765 21 0112 2578899999885 3478
Q ss_pred ceEEEeccccccCCCCcc-----ccCCC-C----ceeeeecCC-----------C-----C---CCCCc--ccccccccc
Q psy18177 130 DFIAMHDVDLIPINPRLN-----YSYPG-D----AIMHIAAPD-----------L-----H---PKYHY--KTFLGGILM 178 (220)
Q Consensus 130 D~lif~DvDlip~~~~~~-----y~~~~-~----~p~hls~~~-----------~-----~---~~~~~--~~~~GG~~~ 178 (220)
|++++.|.|.+|.++... +.... . +|..+.... . . ..... ....++.+.
T Consensus 75 d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~l 154 (281)
T TIGR01556 75 QGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCL 154 (281)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCcccCCceeecccceeeecccccCCceeccEEEcCcce
Confidence 999999999999876421 11010 0 122211000 0 0 00000 111232346
Q ss_pred cchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCCC
Q psy18177 179 MKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPE 219 (220)
Q Consensus 179 i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~ 219 (220)
++++.|+++|||||.|-.++ ||.|+..|+..+|.++...+
T Consensus 155 i~~~~~~~iG~fde~~fi~~-~D~e~~~R~~~~G~~i~~~~ 194 (281)
T TIGR01556 155 ITREVYQRLGMMDEELFIDH-VDTEWSLRAQNYGIPLYIDP 194 (281)
T ss_pred eeHHHHHHhCCccHhhcccc-hHHHHHHHHHHCCCEEEEeC
Confidence 99999999999999987765 99999999999999987543
No 44
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=98.90 E-value=4.5e-09 Score=81.34 Aligned_cols=123 Identities=15% Similarity=0.141 Sum_probs=81.6
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC------------------------cccccchhhhhhHHH
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS------------------------YRFNRGSLINVGFLY 122 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~------------------------~~FnR~~~lN~G~~~ 122 (220)
||||+|||.+.|..+|.++. +|. .+++++|+++..+ ....++.++|.|++.
T Consensus 1 Viip~~n~~~~l~~~l~sl~----~q~~~~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~ 76 (180)
T cd06423 1 IIVPAYNEEAVIERTIESLL----ALDYPKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKENGGKAGALNAGLRH 76 (180)
T ss_pred CeecccChHHHHHHHHHHHH----hCCCCceEEEEEeCCCccchHHHHHHHhccccceEEEEEecccCCchHHHHHHHHh
Confidence 68999999999999999864 333 4678888764321 244467888999987
Q ss_pred hhhcCCCceEEEeccccccCCCCcc---cc-CCCC-----cee--eeecC----------CCCCC-----------CCcc
Q psy18177 123 IQENTHCDFIAMHDVDLIPINPRLN---YS-YPGD-----AIM--HIAAP----------DLHPK-----------YHYK 170 (220)
Q Consensus 123 A~~~~~~D~lif~DvDlip~~~~~~---y~-~~~~-----~p~--hls~~----------~~~~~-----------~~~~ 170 (220)
+ ++|+++|+|.|.++.++... .. .... .+. ..... .+... ....
T Consensus 77 ~----~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (180)
T cd06423 77 A----KGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQSALGGVL 152 (180)
T ss_pred c----CCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccchheecceeeeeeehhheeccee
Confidence 7 99999999999998876421 00 0000 000 00000 00000 0113
Q ss_pred cccccccccchhhhhhcCCCCCCCccCCCCc
Q psy18177 171 TFLGGILMMKNEHFQTVNGLSNKYWGWGLED 201 (220)
Q Consensus 171 ~~~GG~~~i~kedf~kVnGfde~f~GWGgED 201 (220)
...|+.++++|+.+.++||||+...| ||
T Consensus 153 ~~~g~~~~~~~~~~~~~ggf~~~~~~---eD 180 (180)
T cd06423 153 VLSGAFGAFRREALREVGGWDEDTLT---ED 180 (180)
T ss_pred ecCchHHHHHHHHHHHhCCccccCcC---CC
Confidence 35678899999999999999999864 76
No 45
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.87 E-value=1.6e-08 Score=82.89 Aligned_cols=136 Identities=10% Similarity=0.039 Sum_probs=88.1
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccCc------------------------ccccchhhhhhHH
Q psy18177 67 CLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDSY------------------------RFNRGSLINVGFL 121 (220)
Q Consensus 67 sVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~~------------------------~FnR~~~lN~G~~ 121 (220)
|||||+|||.+.|..+|.++. +|. -+++|+|++++..+ .-..+.++|.|+.
T Consensus 1 sIvIp~yn~~~~l~~~l~sl~----~q~~~~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~n~g~~ 76 (214)
T cd04196 1 AVLMATYNGEKYLREQLDSIL----AQTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNLGVARNFESLLQ 76 (214)
T ss_pred CEEEEecCcHHHHHHHHHHHH----hCcCCCeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCccHHHHHHHHHH
Confidence 689999999999999999864 343 36899999864321 1123455677877
Q ss_pred HhhhcCCCceEEEeccccccCCCCcc--ccC-CCC-ce------eee-ecC--C-----C---CCC----C----Ccccc
Q psy18177 122 YIQENTHCDFIAMHDVDLIPINPRLN--YSY-PGD-AI------MHI-AAP--D-----L---HPK----Y----HYKTF 172 (220)
Q Consensus 122 ~A~~~~~~D~lif~DvDlip~~~~~~--y~~-~~~-~p------~hl-s~~--~-----~---~~~----~----~~~~~ 172 (220)
.| ++|+++|+|.|.++.++... +.. ... .+ ... ... . . ... . .....
T Consensus 77 ~~----~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (214)
T cd04196 77 AA----DGDYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIGESFFEYQKIKPGTSFNNLLFQNVV 152 (214)
T ss_pred hC----CCCEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcccccccccccCCccCHHHHHHhCcc
Confidence 66 99999999999988776421 111 000 00 000 000 0 0 000 0 01234
Q ss_pred cccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCC
Q psy18177 173 LGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEAR 212 (220)
Q Consensus 173 ~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G 212 (220)
.|+.+++.|+-+.++++|++.+ .| .||.++..++...|
T Consensus 153 ~~~~~~~r~~~~~~~~~~~~~~-~~-~~D~~~~~~~~~~~ 190 (214)
T cd04196 153 TGCTMAFNRELLELALPFPDAD-VI-MHDWWLALLASAFG 190 (214)
T ss_pred CCceeeEEHHHHHhhccccccc-cc-cchHHHHHHHHHcC
Confidence 6777889999999999999985 23 58999999888754
No 46
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=98.76 E-value=2.1e-08 Score=81.16 Aligned_cols=124 Identities=14% Similarity=0.154 Sum_probs=83.2
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEecc-----------------------CcccccchhhhhhHHHhh
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVD-----------------------SYRFNRGSLINVGFLYIQ 124 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~-----------------------~~~FnR~~~lN~G~~~A~ 124 (220)
||||+||+.+.|..+|..+...+.+...+++|+|+++.. .....++.++|.|++.|
T Consensus 1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n~G~~~a~n~g~~~a- 79 (181)
T cd04187 1 IVVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRNFGQQAALLAGLDHA- 79 (181)
T ss_pred CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCCCCcHHHHHHHHHhc-
Confidence 699999999999999999877655444568888886432 12455778889998887
Q ss_pred hcCCCceEEEeccccccCCCCcc--cc-CCCC----ceeee--ecC--------------CCCCCCCcccccccccccch
Q psy18177 125 ENTHCDFIAMHDVDLIPINPRLN--YS-YPGD----AIMHI--AAP--------------DLHPKYHYKTFLGGILMMKN 181 (220)
Q Consensus 125 ~~~~~D~lif~DvDlip~~~~~~--y~-~~~~----~p~hl--s~~--------------~~~~~~~~~~~~GG~~~i~k 181 (220)
++|++++.|.|..+.++... .. .... .+... ... ......+.....|+..+++|
T Consensus 80 ---~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 156 (181)
T cd04187 80 ---RGDAVITMDADLQDPPELIPEMLAKWEEGYDVVYGVRKNRKESWLKRLTSKLFYRLINKLSGVDIPDNGGDFRLMDR 156 (181)
T ss_pred ---CCCEEEEEeCCCCCCHHHHHHHHHHHhCCCcEEEEEecCCcchHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEcH
Confidence 88999999999988765311 10 1000 00000 000 00001122345678889999
Q ss_pred hhhhhcCCCCCCCc
Q psy18177 182 EHFQTVNGLSNKYW 195 (220)
Q Consensus 182 edf~kVnGfde~f~ 195 (220)
+.+.++|||||.+.
T Consensus 157 ~~~~~i~~~d~~~~ 170 (181)
T cd04187 157 KVVDALLLLPERHR 170 (181)
T ss_pred HHHHHHHhcCCCCc
Confidence 99999999999875
No 47
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=98.69 E-value=2e-07 Score=89.42 Aligned_cols=149 Identities=15% Similarity=0.163 Sum_probs=98.1
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEec-------------------------cCcccccchhh
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQV-------------------------DSYRFNRGSLI 116 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~-------------------------~~~~FnR~~~l 116 (220)
.++++||||.||=++.+...++++ |.++. -+++|+|+.+. .+.+..|+.++
T Consensus 65 ~p~vaIlIPA~NE~~vI~~~l~s~---L~~ldY~~~eIiVv~d~ndd~T~~~v~~l~~~~p~v~~vv~~~~gp~~Ka~aL 141 (504)
T PRK14716 65 EKRIAIFVPAWREADVIGRMLEHN---LATLDYENYRIFVGTYPNDPATLREVDRLAARYPRVHLVIVPHDGPTSKADCL 141 (504)
T ss_pred CCceEEEEeccCchhHHHHHHHHH---HHcCCCCCeEEEEEECCCChhHHHHHHHHHHHCCCeEEEEeCCCCCCCHHHHH
Confidence 678999999999999999988875 23332 35777777521 12356689999
Q ss_pred hhhHHHhh--hcC---CCceEEEeccccccCCCCccc---cCCCC----ceeee-ecC-----------CC---CC----
Q psy18177 117 NVGFLYIQ--ENT---HCDFIAMHDVDLIPINPRLNY---SYPGD----AIMHI-AAP-----------DL---HP---- 165 (220)
Q Consensus 117 N~G~~~A~--~~~---~~D~lif~DvDlip~~~~~~y---~~~~~----~p~hl-s~~-----------~~---~~---- 165 (220)
|.|++.+. +.. ++|+++++|+|.+++++.... ..++. .|..- ... ++ +.
T Consensus 142 N~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~~~~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~ 221 (504)
T PRK14716 142 NWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLLPRHDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLP 221 (504)
T ss_pred HHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhcCCCCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 99988652 222 359999999999999986322 12211 01100 000 00 00
Q ss_pred ---CCCc-ccccccccccchhhhhhc-----CC-CCCCCccCCCCcHHHHHHHHHCCCeEeC
Q psy18177 166 ---KYHY-KTFLGGILMMKNEHFQTV-----NG-LSNKYWGWGLEDDELYVRIKEARIRIER 217 (220)
Q Consensus 166 ---~~~~-~~~~GG~~~i~kedf~kV-----nG-fde~f~GWGgED~Dl~~Rl~~~G~~i~R 217 (220)
.... ....|..++++|+.++++ || ||++-- -||.|+..|+..+|+++.-
T Consensus 222 ~r~~LG~~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sL---TED~dLglRL~~~G~rv~y 280 (504)
T PRK14716 222 VREALGGLIPSAGVGTAFSRRALERLAAERGGQPFDSDSL---TEDYDIGLRLKRAGFRQIF 280 (504)
T ss_pred HHHhcCCccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCc---chHHHHHHHHHHCCCEEEE
Confidence 0000 123466788999999998 33 888654 5999999999999999753
No 48
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=98.68 E-value=8.8e-08 Score=79.64 Aligned_cols=144 Identities=19% Similarity=0.225 Sum_probs=95.0
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhc-CcceeEEEEEeccC------------------------cccccchhhhhhHHH
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQ-NIVYNVYVVNQVDS------------------------YRFNRGSLINVGFLY 122 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q-~~~~~I~Vveq~~~------------------------~~FnR~~~lN~G~~~ 122 (220)
||||.||..+.|..+|+++...+..| ...++|+|+++... ....++.++|.|++.
T Consensus 1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~~~g~~~ 80 (211)
T cd04188 1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLARKNPALIRVLTLPKNRGKGGAVRAGMLA 80 (211)
T ss_pred CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEcccCCCcHHHHHHHHHH
Confidence 69999999999999999987655432 25688988875321 134467888999998
Q ss_pred hhhcCCCceEEEeccccccCCCCccc--c--CCCC-----ceeeeecCC--C-CC------------------CCCcccc
Q psy18177 123 IQENTHCDFIAMHDVDLIPINPRLNY--S--YPGD-----AIMHIAAPD--L-HP------------------KYHYKTF 172 (220)
Q Consensus 123 A~~~~~~D~lif~DvDlip~~~~~~y--~--~~~~-----~p~hls~~~--~-~~------------------~~~~~~~ 172 (220)
| ++|++++.|.|....++.... . .... +.+...... . .. ..++...
T Consensus 81 a----~gd~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 156 (211)
T cd04188 81 A----RGDYILFADADLATPFEELEKLEEALKTSGYDIAIGSRAHLASAAVVKRSWLRNLLGRGFNFLVRLLLGLGIKDT 156 (211)
T ss_pred h----cCCEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEEEeeccCCcccccccHHHHHHHHHHHHHHHHHcCCCCccc
Confidence 8 889999999999877653210 0 0000 111110000 0 00 0111122
Q ss_pred cccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeC
Q psy18177 173 LGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIER 217 (220)
Q Consensus 173 ~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R 217 (220)
-.|..++.|+.+.++.+. +...||+ +|.|+..|+..+|+++.-
T Consensus 157 ~~g~~~~~r~~~~~~~~~-~~~~~~~-~d~el~~r~~~~g~~~~~ 199 (211)
T cd04188 157 QCGFKLFTRDAARRLFPR-LHLERWA-FDVELLVLARRLGYPIEE 199 (211)
T ss_pred ccCceeEcHHHHHHHHhh-hhccceE-eeHHHHHHHHHcCCeEEE
Confidence 346778999999998755 3345777 799999999999998753
No 49
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=98.68 E-value=7.5e-08 Score=84.51 Aligned_cols=151 Identities=11% Similarity=0.111 Sum_probs=96.4
Q ss_pred eEEEEEecCCHHH-HHHHHHHHHHHhhhcCc--ceeEEEEEeccCccc--------c-----------------------
Q psy18177 66 LCLIIPFRDRFDE-LLIFLMHMKVFLERQNI--VYNVYVVNQVDSYRF--------N----------------------- 111 (220)
Q Consensus 66 vsVIIP~r~R~~~-L~~~L~~l~~~L~~q~~--~~~I~Vveq~~~~~F--------n----------------------- 111 (220)
|||+||.||-... |...|.++...+..|.. +|+|+++++.++... +
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~~~~v~~~~r~~~~g~ 80 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADHFDFFILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRRRRENTGR 80 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCceEEEEECCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCCCCc
Confidence 6999999997765 88888887666666654 799999876554210 0
Q ss_pred cchhhhhhHHHhhhcCCCceEEEeccccccCCCCcccc----C--CCC----ceeee-ecCC------------CCC---
Q psy18177 112 RGSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNYS----Y--PGD----AIMHI-AAPD------------LHP--- 165 (220)
Q Consensus 112 R~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y~----~--~~~----~p~hl-s~~~------------~~~--- 165 (220)
|+..+|.+... ..+++|++++.|+|.++.+++.... . ++. .|..+ +... +.+
T Consensus 81 Kag~l~~~~~~--~~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 158 (254)
T cd04191 81 KAGNIADFCRR--WGSRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIGAETLFARLQQFANRLYGPVFG 158 (254)
T ss_pred cHHHHHHHHHH--hCCCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeECCCCHHHHHHHHHHHHHHHHHH
Confidence 11222222221 0257899999999999999863211 1 110 01111 1000 000
Q ss_pred ---C---CCcccccccccccchhhhhhcCCCCC--CCccCC----CCcHHHHHHHHHCCCeEeCC
Q psy18177 166 ---K---YHYKTFLGGILMMKNEHFQTVNGLSN--KYWGWG----LEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 166 ---~---~~~~~~~GG~~~i~kedf~kVnGfde--~f~GWG----gED~Dl~~Rl~~~G~~i~R~ 218 (220)
. -.-..++|-+..+.|+.|.+++|+++ .+-||+ .||.++..|+..+|+++.-.
T Consensus 159 ~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~ 223 (254)
T cd04191 159 RGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLA 223 (254)
T ss_pred HHHHHhcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEc
Confidence 0 01123567788999999999998875 567886 48999999999999998643
No 50
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.64 E-value=2.4e-07 Score=84.91 Aligned_cols=145 Identities=19% Similarity=0.192 Sum_probs=98.6
Q ss_pred CcceEEEEEecCCHH-HHHHHHHHHHHHhhhcCc-ceeEEEEEeccC-----------ccc------------c--cchh
Q psy18177 63 QHELCLIIPFRDRFD-ELLIFLMHMKVFLERQNI-VYNVYVVNQVDS-----------YRF------------N--RGSL 115 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~-~L~~~L~~l~~~L~~q~~-~~~I~Vveq~~~-----------~~F------------n--R~~~ 115 (220)
..+++||||.||=+. -+..++.++ .+|.. .++|++++++++ ..+ + |+.+
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~----~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gK~~a 128 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESL----LSQDYPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVIYPEKKNGGKAGA 128 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHH----HhCCCCCceEEEECCCCChhHHHHHHHHHhhcCcceEEEeccccCccchHH
Confidence 489999999998655 888888885 34553 378888876321 011 2 2456
Q ss_pred hhhhHHHhhhcCCCceEEEeccccccCCCCcccc----CCC-C-----ceeeeec---CC-------CCC----------
Q psy18177 116 INVGFLYIQENTHCDFIAMHDVDLIPINPRLNYS----YPG-D-----AIMHIAA---PD-------LHP---------- 165 (220)
Q Consensus 116 lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y~----~~~-~-----~p~hls~---~~-------~~~---------- 165 (220)
+|.|...| ++|++++.|+|.+|++|..... ... . .|...+. .. +..
T Consensus 129 l~~~l~~~----~~d~V~~~DaD~~~~~d~l~~~~~~f~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 204 (439)
T COG1215 129 LNNGLKRA----KGDVVVILDADTVPEPDALRELVSPFEDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRA 204 (439)
T ss_pred HHHHHhhc----CCCEEEEEcCCCCCChhHHHHHHhhhcCCCeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhh
Confidence 67776665 7999999999999999863211 000 0 1221111 00 000
Q ss_pred --CCC-cccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 166 --KYH-YKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 166 --~~~-~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
+.. .....|...++.|+-+.++||+++... .||.|+..|++..|+++...
T Consensus 205 ~~~~g~~~~~~G~~~~~rr~aL~~~g~~~~~~i---~ED~~lt~~l~~~G~~~~~~ 257 (439)
T COG1215 205 ASKGGLISFLSGSSSAFRRSALEEVGGWLEDTI---TEDADLTLRLHLRGYRVVYV 257 (439)
T ss_pred hhhcCCeEEEcceeeeEEHHHHHHhCCCCCCce---eccHHHHHHHHHCCCeEEEe
Confidence 001 123578889999999999999999887 59999999999999998754
No 51
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=98.54 E-value=1.9e-07 Score=72.29 Aligned_cols=72 Identities=17% Similarity=0.133 Sum_probs=54.1
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccC-----------------------cccccchhhhhhHHHh
Q psy18177 67 CLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDS-----------------------YRFNRGSLINVGFLYI 123 (220)
Q Consensus 67 sVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~-----------------------~~FnR~~~lN~G~~~A 123 (220)
|||||+||+.+.|..+|.++... ...+++|+|++..+. .....+.++|.|++.|
T Consensus 1 Svvip~~n~~~~l~~~l~sl~~q---~~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n~g~~~~~n~~~~~a 77 (169)
T PF00535_consen 1 SVVIPTYNEAEYLERTLESLLKQ---TDPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPENLGFSAARNRGIKHA 77 (169)
T ss_dssp EEEEEESS-TTTHHHHHHHHHHH---SGCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCCSHHHHHHHHHHHH-
T ss_pred CEEEEeeCCHHHHHHHHHHHhhc---cCCCEEEEEecccccccccccccccccccccccccccccccccccccccccccc
Confidence 79999999999999999997532 356788888875421 1335678889999988
Q ss_pred hhcCCCceEEEeccccccCCCC
Q psy18177 124 QENTHCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 124 ~~~~~~D~lif~DvDlip~~~~ 145 (220)
+++|++++|.|.++.++.
T Consensus 78 ----~~~~i~~ld~D~~~~~~~ 95 (169)
T PF00535_consen 78 ----KGEYILFLDDDDIISPDW 95 (169)
T ss_dssp -----SSEEEEEETTEEE-TTH
T ss_pred ----ceeEEEEeCCCceEcHHH
Confidence 888999999999998874
No 52
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.52 E-value=1.9e-07 Score=75.12 Aligned_cols=131 Identities=18% Similarity=0.243 Sum_probs=83.8
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEecc-----------------------CcccccchhhhhhHHHhh
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVD-----------------------SYRFNRGSLINVGFLYIQ 124 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~-----------------------~~~FnR~~~lN~G~~~A~ 124 (220)
||||+||+.++|..+|.++.+.... ...++|+|++... .....++.++|.|+..|
T Consensus 1 iii~~~n~~~~l~~~l~sl~~~~~~-~~~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G~~~a~n~g~~~a- 78 (185)
T cd04179 1 VVIPAYNEEENIPELVERLLAVLEE-GYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFGKGAAVRAGFKAA- 78 (185)
T ss_pred CeecccChHhhHHHHHHHHHHHhcc-CCCEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCCccHHHHHHHHHh-
Confidence 6899999999999999997543221 3478898886432 12345688999999988
Q ss_pred hcCCCceEEEeccccccCCCCcc--ccC--CC-C----ceeeeecC---C--------------CC--CCCCcccccccc
Q psy18177 125 ENTHCDFIAMHDVDLIPINPRLN--YSY--PG-D----AIMHIAAP---D--------------LH--PKYHYKTFLGGI 176 (220)
Q Consensus 125 ~~~~~D~lif~DvDlip~~~~~~--y~~--~~-~----~p~hls~~---~--------------~~--~~~~~~~~~GG~ 176 (220)
.+|+++|.|.|..+.++... ... .. . ++...... . .. ...+.....||.
T Consensus 79 ---~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (185)
T cd04179 79 ---RGDIVVTMDADLQHPPEDIPKLLEKLLEGGADVVIGSRFVRGGGAGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGF 155 (185)
T ss_pred ---cCCEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEEEeecCCCcccchHHHHHHHHHHHHHHHHHcCCCCcCCCCce
Confidence 78999999999987765321 110 00 0 11110000 0 00 011233456888
Q ss_pred cccchhhhhhc--CCCCCCCccCCCCcHHHHHH
Q psy18177 177 LMMKNEHFQTV--NGLSNKYWGWGLEDDELYVR 207 (220)
Q Consensus 177 ~~i~kedf~kV--nGfde~f~GWGgED~Dl~~R 207 (220)
+++.|+.|.++ +++++.|- +|.|+.-|
T Consensus 156 ~~~~r~~~~~i~~~~~~~~~~----~~~~~~~~ 184 (185)
T cd04179 156 RLFRREVLEALLSLLESNGFE----FGLELLVG 184 (185)
T ss_pred eeeHHHHHHHHHhhccccCcc----eeeEeeec
Confidence 99999999999 77777762 55565544
No 53
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.51 E-value=3.5e-07 Score=82.87 Aligned_cols=75 Identities=17% Similarity=0.256 Sum_probs=59.2
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC----------------------cccccchhhhhh
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS----------------------YRFNRGSLINVG 119 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~----------------------~~FnR~~~lN~G 119 (220)
..+||||||+||+++.|..+|.++. .|. .++||+|+++.+. +.-..+.++|.|
T Consensus 5 ~p~vSVIIP~yN~~~~L~~~l~Sl~----~Qt~~~~EIIiVdDgStD~t~~i~~~~~~~~~~i~vi~~~n~G~~~arN~g 80 (328)
T PRK10073 5 TPKLSIIIPLYNAGKDFRAFMESLI----AQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLHQANAGVSVARNTG 80 (328)
T ss_pred CCeEEEEEeccCCHHHHHHHHHHHH----hCCCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEECCCCChHHHHHHH
Confidence 3579999999999999999999863 454 4689999876421 122356788999
Q ss_pred HHHhhhcCCCceEEEeccccccCCCC
Q psy18177 120 FLYIQENTHCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 120 ~~~A~~~~~~D~lif~DvDlip~~~~ 145 (220)
++.| ++||++|.|.|-...++.
T Consensus 81 l~~a----~g~yi~flD~DD~~~p~~ 102 (328)
T PRK10073 81 LAVA----TGKYVAFPDADDVVYPTM 102 (328)
T ss_pred HHhC----CCCEEEEECCCCccChhH
Confidence 9987 999999999999877663
No 54
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=98.42 E-value=7.2e-07 Score=80.77 Aligned_cols=78 Identities=19% Similarity=0.286 Sum_probs=61.6
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccC------------------------cccccchhhhh
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDS------------------------YRFNRGSLINV 118 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~------------------------~~FnR~~~lN~ 118 (220)
.+++|||||+||.+++|..+++.+...++....++||+++++.+. ..+.++.|+|.
T Consensus 5 ~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~n~G~~~A~~~ 84 (325)
T PRK10714 5 IKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNRNYGQHSAIMA 84 (325)
T ss_pred CCeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCCCCCHHHHHHH
Confidence 457999999999999999999998876665556799999886321 12334478888
Q ss_pred hHHHhhhcCCCceEEEeccccccCCC
Q psy18177 119 GFLYIQENTHCDFIAMHDVDLIPINP 144 (220)
Q Consensus 119 G~~~A~~~~~~D~lif~DvDlip~~~ 144 (220)
|++.| ++|++++.|+|+...++
T Consensus 85 G~~~A----~gd~vv~~DaD~q~~p~ 106 (325)
T PRK10714 85 GFSHV----TGDLIITLDADLQNPPE 106 (325)
T ss_pred HHHhC----CCCEEEEECCCCCCCHH
Confidence 88877 89999999999986654
No 55
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=98.33 E-value=1.3e-06 Score=78.60 Aligned_cols=143 Identities=13% Similarity=0.156 Sum_probs=89.4
Q ss_pred CCCcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCc-----------------------ccc--cchh
Q psy18177 61 HDQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSY-----------------------RFN--RGSL 115 (220)
Q Consensus 61 ~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~-----------------------~Fn--R~~~ 115 (220)
+...++|||||.||..++|..+++.+...+.. ...++|+|+++.+.+ +.| ++.+
T Consensus 28 ~~~~~vSVVIPayNee~~I~~~l~sl~~~~~~-~~~~EIIVVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n~Gkg~A 106 (306)
T PRK13915 28 KAGRTVSVVLPALNEEETVGKVVDSIRPLLME-PLVDELIVIDSGSTDATAERAAAAGARVVSREEILPELPPRPGKGEA 106 (306)
T ss_pred cCCCCEEEEEecCCcHHHHHHHHHHHHHHhcc-CCCcEEEEEeCCCccHHHHHHHHhcchhhcchhhhhccccCCCHHHH
Confidence 35678999999999999999999997654321 346799998853210 223 4567
Q ss_pred hhhhHHHhhhcCCCceEEEeccccc-cCCCCcc----cc--CCCCc------eeeeec-----CCCCCC-----------
Q psy18177 116 INVGFLYIQENTHCDFIAMHDVDLI-PINPRLN----YS--YPGDA------IMHIAA-----PDLHPK----------- 166 (220)
Q Consensus 116 lN~G~~~A~~~~~~D~lif~DvDli-p~~~~~~----y~--~~~~~------p~hls~-----~~~~~~----------- 166 (220)
+|.|+..| ++|+++|+|.|+. +.++... .. -++.. .+.+.. .....+
T Consensus 107 ~~~g~~~a----~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~~~~V~g~~~r~~~~~~~~~~~~~gr~~~~~~~~l~~ 182 (306)
T PRK13915 107 LWRSLAAT----TGDIVVFVDADLINFDPMFVPGLLGPLLTDPGVHLVKAFYRRPLRVSGGVDATGGGRVTELVARPLLN 182 (306)
T ss_pred HHHHHHhc----CCCEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEEeccccccccccCcCCCCchHHHHHHHHHH
Confidence 78888876 8999999999997 5554310 00 11100 000000 000000
Q ss_pred ------CCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHH-HCCC
Q psy18177 167 ------YHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIK-EARI 213 (220)
Q Consensus 167 ------~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~-~~G~ 213 (220)
.......+|.+++.|+-+.++. |++ ||| .+.++...+. ..|+
T Consensus 183 ~~~~~l~~i~dp~sG~~a~rr~~l~~l~-~~~---~yg-~e~~~l~~~~~~~g~ 231 (306)
T PRK13915 183 LLRPELAGFVQPLGGEYAGRRELLESLP-FVP---GYG-VEIGLLIDTLDRLGL 231 (306)
T ss_pred HHHHhhhcccCcchHhHHHHHHHHHhCC-CCC---CCe-ehHHHHHHHHHHhCc
Confidence 0112345788999999999885 663 576 5777777776 3565
No 56
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.30 E-value=2.4e-06 Score=65.24 Aligned_cols=74 Identities=22% Similarity=0.283 Sum_probs=56.8
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcc-eeEEEEEeccC-----------------------cccccchhhhh
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQNIV-YNVYVVNQVDS-----------------------YRFNRGSLINV 118 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~-~~I~Vveq~~~-----------------------~~FnR~~~lN~ 118 (220)
.+++|||||+||+.+.|..++.++. +|..+ ++|+|++..+. .....+.++|.
T Consensus 2 ~~~~siiip~~n~~~~l~~~l~s~~----~q~~~~~eiivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 77 (291)
T COG0463 2 MPKVSVVIPTYNEEEYLPEALESLL----NQTYKDFEIIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERNGGLGAARNA 77 (291)
T ss_pred CccEEEEEeccchhhhHHHHHHHHH----hhhhcceEEEEEeCCCCCChHHHHHHHhhhcceEEEeecccCCChHHHHHh
Confidence 5789999999999999999999864 44433 68888875321 13445677788
Q ss_pred hHHHhhhcCCCceEEEeccccccCCCC
Q psy18177 119 GFLYIQENTHCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 119 G~~~A~~~~~~D~lif~DvDlip~~~~ 145 (220)
|+..+ .+|++.+.|.|.+ +++.
T Consensus 78 ~~~~~----~~~~~~~~d~d~~-~~~~ 99 (291)
T COG0463 78 GLEYA----RGDYIVFLDADDQ-HPPE 99 (291)
T ss_pred hHHhc----cCCEEEEEccCCC-CCHH
Confidence 88877 6799999999999 7664
No 57
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=98.26 E-value=1e-05 Score=73.52 Aligned_cols=151 Identities=18% Similarity=0.243 Sum_probs=96.3
Q ss_pred cCCCcceEEEEEecCCHHHHHHHHHHHHHHhhh---c--CcceeEEEEEeccC---------------------------
Q psy18177 60 LHDQHELCLIIPFRDRFDELLIFLMHMKVFLER---Q--NIVYNVYVVNQVDS--------------------------- 107 (220)
Q Consensus 60 ~~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~---q--~~~~~I~Vveq~~~--------------------------- 107 (220)
..+..+++||||.||..++|..+|+.+...+.. | ..+++|+|+++.+.
T Consensus 66 ~~~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~ 145 (333)
T PTZ00260 66 KDSDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLL 145 (333)
T ss_pred CCCCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcC
Confidence 345678999999999999999999998776652 1 23689999986321
Q ss_pred cccccchhhhhhHHHhhhcCCCceEEEeccccccCCCCc--ccc-C-----CCC----cee-eeecC-C-CCC-------
Q psy18177 108 YRFNRGSLINVGFLYIQENTHCDFIAMHDVDLIPINPRL--NYS-Y-----PGD----AIM-HIAAP-D-LHP------- 165 (220)
Q Consensus 108 ~~FnR~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~--~y~-~-----~~~----~p~-hls~~-~-~~~------- 165 (220)
....++.++|.|++.| ++|++++.|.|.....+.. ... . ++. +.+ +.... . ...
T Consensus 146 ~N~G~~~A~~~Gi~~a----~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR~~~~~~~~~~~~~~~r~~~ 221 (333)
T PTZ00260 146 RNKGKGGAVRIGMLAS----RGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSRNHLVDSDVVAKRKWYRNIL 221 (333)
T ss_pred CCCChHHHHHHHHHHc----cCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeeccccccCcccccCcHHHHHH
Confidence 1123567788888877 8999999999987555421 000 0 000 111 11000 0 000
Q ss_pred ------------CCCcccccccccccchhhhhhcCCCC-CCCccCCCCcHHHHHHHHHCCCeEeC
Q psy18177 166 ------------KYHYKTFLGGILMMKNEHFQTVNGLS-NKYWGWGLEDDELYVRIKEARIRIER 217 (220)
Q Consensus 166 ------------~~~~~~~~GG~~~i~kedf~kVnGfd-e~f~GWGgED~Dl~~Rl~~~G~~i~R 217 (220)
.......-.|--+++|+....+ +. ....||+ -|.|+..++...|++|.-
T Consensus 222 ~~~~~~l~~~~~~~~i~D~~~Gfk~~~r~~~~~i--~~~~~~~~~~-fd~Ell~~a~~~g~~I~E 283 (333)
T PTZ00260 222 MYGFHFIVNTICGTNLKDTQCGFKLFTRETARII--FPSLHLERWA-FDIEIVMIAQKLNLPIAE 283 (333)
T ss_pred HHHHHHHHHHHcCCCcccCCCCeEEEeHHHHHHH--hhhccccCcc-chHHHHHHHHHcCCCEEE
Confidence 0011223346668888888877 32 3445776 699999999999998753
No 58
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=98.22 E-value=2.7e-06 Score=73.24 Aligned_cols=141 Identities=16% Similarity=0.076 Sum_probs=88.2
Q ss_pred EEEEecCCH-HHHHHHHHHHHHHhhhcCc-----------ceeEEEEEeccCcccccchh---------hhhhHHHhhhc
Q psy18177 68 LIIPFRDRF-DELLIFLMHMKVFLERQNI-----------VYNVYVVNQVDSYRFNRGSL---------INVGFLYIQEN 126 (220)
Q Consensus 68 VIIP~r~R~-~~L~~~L~~l~~~L~~q~~-----------~~~I~Vveq~~~~~FnR~~~---------lN~G~~~A~~~ 126 (220)
||||.||-. +.|...|+++. +|.. .++|+|+.+.... =|++|. +|.|+..
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~----~q~y~~~~~~~~~~~~~evivv~Dgs~d-~~~gk~~~~~~~~~~~~~~~~~---- 71 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSIL----KNDYPFCARGGDSWKKIVVCVIFDGAIK-KNRGKRDSQLWFFNYFCRVLFP---- 71 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHH----HhhHHHHhcCCCCccEEEEEEEeCCccc-ccCcchHHHHHHHHHHHHHhhc----
Confidence 699999996 78999999974 3332 5899998876553 345543 3445444
Q ss_pred CCCceEEEeccccccCCCCccc---cC---CCC----ceeeeecC---------CCCC------------CCCcc-cccc
Q psy18177 127 THCDFIAMHDVDLIPINPRLNY---SY---PGD----AIMHIAAP---------DLHP------------KYHYK-TFLG 174 (220)
Q Consensus 127 ~~~D~lif~DvDlip~~~~~~y---~~---~~~----~p~hls~~---------~~~~------------~~~~~-~~~G 174 (220)
+++|++++.|+|.+++++.+.. .+ +.. +..+.... .+.+ ...+. ...|
T Consensus 72 a~~e~i~~~DaD~~~~~~~l~~l~~~~~~~p~vg~v~g~~~~~~~~~~~~~~~q~~ey~~~~~~~~~~~s~~g~~~~~~G 151 (244)
T cd04190 72 DDPEFILLVDADTKFDPDSIVQLYKAMDKDPEIGGVCGEIHPMGKKQGPLVMYQVFEYAISHWLDKAFESVFGFVTCLPG 151 (244)
T ss_pred CCCCEEEEECCCCcCCHhHHHHHHHHHHhCCCEEEEEeeeEEcCCcchhHHHhHheehhhhhhhcccHHHcCCceEECCC
Confidence 4899999999999998875311 01 110 00000000 0000 01111 1235
Q ss_pred cccccchhhhhhcCCCCCCC-----------ccC------CCCcHHHHHHHHHCCCeEeC
Q psy18177 175 GILMMKNEHFQTVNGLSNKY-----------WGW------GLEDDELYVRIKEARIRIER 217 (220)
Q Consensus 175 G~~~i~kedf~kVnGfde~f-----------~GW------GgED~Dl~~Rl~~~G~~i~R 217 (220)
...++.++.+.+++|+...+ .|+ =+||.+|..|+..+|.++..
T Consensus 152 ~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~l~~~G~~~~~ 211 (244)
T cd04190 152 CFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTLLLKAGPKRKY 211 (244)
T ss_pred ceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHHHhccCCccEE
Confidence 56678889999998876421 121 16999999999999998765
No 59
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=98.14 E-value=2.4e-05 Score=78.25 Aligned_cols=150 Identities=14% Similarity=0.120 Sum_probs=95.8
Q ss_pred CCcceEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC-------------------------cccccchh
Q psy18177 62 DQHELCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS-------------------------YRFNRGSL 115 (220)
Q Consensus 62 ~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~-------------------------~~FnR~~~ 115 (220)
..+++||+||.||=.......+.++. .++. -+++|+++.+.++ .+=.|+.+
T Consensus 61 ~~~~vsIlVPa~nE~~vi~~~i~~ll---~~ldYP~~eI~vi~~~nD~~T~~~~~~l~~~~p~~~~v~~~~~g~~gKa~a 137 (727)
T PRK11234 61 DEKPLAIMVPAWNETGVIGNMAELAA---TTLDYENYHIFVGTYPNDPATQADVDAVCARFPNVHKVVCARPGPTSKADC 137 (727)
T ss_pred CCCCEEEEEecCcchhhHHHHHHHHH---HhCCCCCeEEEEEecCCChhHHHHHHHHHHHCCCcEEEEeCCCCCCCHHHH
Confidence 45789999999999998888888763 3444 2478888742111 11237889
Q ss_pred hhhhHHHhhh-----cCCCceEEEeccccccCCCCcc---ccCCCCceeee---ec-------------CCC---CC---
Q psy18177 116 INVGFLYIQE-----NTHCDFIAMHDVDLIPINPRLN---YSYPGDAIMHI---AA-------------PDL---HP--- 165 (220)
Q Consensus 116 lN~G~~~A~~-----~~~~D~lif~DvDlip~~~~~~---y~~~~~~p~hl---s~-------------~~~---~~--- 165 (220)
+|.|+..+.+ ...+|.++++|+|++++++... +.......... +. .+| +.
T Consensus 138 LN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~~~~~l~~~~~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~ 217 (727)
T PRK11234 138 LNNVLDAITQFERSANFAFAGFILHDAEDVISPMELRLFNYLVERKDLIQIPVYPFEREWTHFTSGTYIDEFAELHGKDV 217 (727)
T ss_pred HHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHHHHHhhcCCCCeEeecccCCCccHHHHHHHHHHHHHHHHhhhhh
Confidence 9999987632 2256889999999999998643 22221111100 00 001 10
Q ss_pred ----CCCc-ccccccccccchh---hhhhcC---CCCCCCccCCCCcHHHHHHHHHCCCeEeC
Q psy18177 166 ----KYHY-KTFLGGILMMKNE---HFQTVN---GLSNKYWGWGLEDDELYVRIKEARIRIER 217 (220)
Q Consensus 166 ----~~~~-~~~~GG~~~i~ke---df~kVn---Gfde~f~GWGgED~Dl~~Rl~~~G~~i~R 217 (220)
.+.- ....|-.++++|. ...++| +|+...- .||.|+..|+..+|+++.-
T Consensus 218 ~~~~~lgg~~~l~G~~~af~Rr~l~al~~~ggg~~~~~~~l---TED~dlg~rL~~~G~~v~f 277 (727)
T PRK11234 218 PVREALAGQVPSAGVGTCFSRRAVTALLEDGDGIAFDVQSL---TEDYDIGFRLKEKGMREIF 277 (727)
T ss_pred HHHHHcCCCcccCCceEEEecccHHHHHHhcCCCCcCCCcc---hHHHHHHHHHHHCCCEEEE
Confidence 0111 1233445777344 588888 5888766 5999999999999999853
No 60
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=98.14 E-value=6.2e-06 Score=67.23 Aligned_cols=74 Identities=19% Similarity=0.279 Sum_probs=56.7
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhcC---cceeEEEEEeccC--------------------cccccchhhhhhHHHhh
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQN---IVYNVYVVNQVDS--------------------YRFNRGSLINVGFLYIQ 124 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q~---~~~~I~Vveq~~~--------------------~~FnR~~~lN~G~~~A~ 124 (220)
||||.||..+.|..+|.++. +|. ..++|+|+++.+. ....|+.++|.|+..|.
T Consensus 1 VvIp~~ne~~~i~~~l~sl~----~~~~p~~~~eiivvdd~s~D~t~~~~~~~~~~~~~~~~~~~~gk~~aln~g~~~a~ 76 (183)
T cd06438 1 ILIPAHNEEAVIGNTVRSLK----AQDYPRELYRIFVVADNCTDDTAQVARAAGATVLERHDPERRGKGYALDFGFRHLL 76 (183)
T ss_pred CEEeccchHHHHHHHHHHHH----hcCCCCcccEEEEEeCCCCchHHHHHHHcCCeEEEeCCCCCCCHHHHHHHHHHHHH
Confidence 69999999999999999864 333 3478888865321 23357789999999873
Q ss_pred h-cCCCceEEEeccccccCCCC
Q psy18177 125 E-NTHCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 125 ~-~~~~D~lif~DvDlip~~~~ 145 (220)
+ .+++|+++++|+|.++.++.
T Consensus 77 ~~~~~~d~v~~~DaD~~~~p~~ 98 (183)
T cd06438 77 NLADDPDAVVVFDADNLVDPNA 98 (183)
T ss_pred hcCCCCCEEEEEcCCCCCChhH
Confidence 1 34699999999999998875
No 61
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=98.11 E-value=4.6e-05 Score=75.84 Aligned_cols=157 Identities=12% Similarity=0.147 Sum_probs=94.4
Q ss_pred CCcCCCcceEEEEEecCCH-----HHHHHHHHHHHHHhhhcC--cceeEEEEEeccCcc---------------------
Q psy18177 58 STLHDQHELCLIIPFRDRF-----DELLIFLMHMKVFLERQN--IVYNVYVVNQVDSYR--------------------- 109 (220)
Q Consensus 58 ~~~~~~~kvsVIIP~r~R~-----~~L~~~L~~l~~~L~~q~--~~~~I~Vveq~~~~~--------------------- 109 (220)
+......+|+|+||.||-+ +.|+..+.++ .+|+ -+++++|+.+..++.
T Consensus 118 ~~~~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl----~~~~~~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~ 193 (691)
T PRK05454 118 PPPPPEARTAILMPIYNEDPARVFAGLRAMYESL----AATGHGAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGR 193 (691)
T ss_pred CCCCCCCceEEEEeCCCCChHHHHHHHHHHHHHH----HhcCCCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCc
Confidence 3445567999999999944 2344444443 3443 358999987643211
Q ss_pred -cccc-------hhhhhhHHHhhhcCCCceEEEeccccccCCCCcccc------CCCCc-----eeeeecC-------CC
Q psy18177 110 -FNRG-------SLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNYS------YPGDA-----IMHIAAP-------DL 163 (220)
Q Consensus 110 -FnR~-------~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y~------~~~~~-----p~hls~~-------~~ 163 (220)
|-|. |+-|.+-....-.+++||++..|+|.++.+|+.... -++.+ |...+.. .+
T Consensus 194 i~yr~R~~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQt~~~~~n~~slfaR~qqf 273 (691)
T PRK05454 194 IFYRRRRRNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQTLPVAVGADTLFARLQQF 273 (691)
T ss_pred EEEEECCcCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEeCCccCcCCCCHHHHHHHH
Confidence 1111 344444221110257899999999999998863211 11100 1101100 00
Q ss_pred -----CC----CC-----CcccccccccccchhhhhhcCCCCC--CCccCCCC----cHHHHHHHHHCCCeEeCC
Q psy18177 164 -----HP----KY-----HYKTFLGGILMMKNEHFQTVNGLSN--KYWGWGLE----DDELYVRIKEARIRIERP 218 (220)
Q Consensus 164 -----~~----~~-----~~~~~~GG~~~i~kedf~kVnGfde--~f~GWGgE----D~Dl~~Rl~~~G~~i~R~ 218 (220)
.+ .. ....++|-+..+.++.|.+++|.++ ..-|||++ |.+...++..+|+++.-.
T Consensus 274 ~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~ 348 (691)
T PRK05454 274 ATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLA 348 (691)
T ss_pred HHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEc
Confidence 00 00 1234778888999999999999876 56778765 999999999999998643
No 62
>KOG3736|consensus
Probab=98.09 E-value=8.7e-07 Score=85.96 Aligned_cols=47 Identities=26% Similarity=0.405 Sum_probs=42.6
Q ss_pred ccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEe
Q psy18177 170 KTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIE 216 (220)
Q Consensus 170 ~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~ 216 (220)
....||.||++|+=|..+|+||+....||||..||..|+-.-|-.+.
T Consensus 313 PtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~le 359 (578)
T KOG3736|consen 313 PTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLE 359 (578)
T ss_pred cccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEE
Confidence 45789999999999999999999999999999999999888776653
No 63
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=97.97 E-value=2.9e-05 Score=71.10 Aligned_cols=142 Identities=18% Similarity=0.210 Sum_probs=86.3
Q ss_pred eEEEEEecCCHHHHHHHHHHHHHHhhh-cCcceeEEEEEeccC----------------------ccccc----------
Q psy18177 66 LCLIIPFRDRFDELLIFLMHMKVFLER-QNIVYNVYVVNQVDS----------------------YRFNR---------- 112 (220)
Q Consensus 66 vsVIIP~r~R~~~L~~~L~~l~~~L~~-q~~~~~I~Vveq~~~----------------------~~FnR---------- 112 (220)
++|||+.+||+++|+++|++|.+. + ..-+++|+|+.+.++ ..-|.
T Consensus 2 ~PVlv~ayNRp~~l~r~LesLl~~--~p~~~~~~liIs~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~ 79 (334)
T cd02514 2 IPVLVIACNRPDYLRRMLDSLLSY--RPSAEKFPIIVSQDGGYEEVADVAKSFGDGVTHIQHPPISIKNVNPPHKFQGYY 79 (334)
T ss_pred cCEEEEecCCHHHHHHHHHHHHhc--cccCCCceEEEEeCCCchHHHHHHHhhccccEEEEcccccccccCcccccchhh
Confidence 579999999999999999998532 1 113566777643211 11111
Q ss_pred --c----hhhhhhHHHhhhcCCCceEEEeccccccCCCCcccc------CCCC-ceeeeecC----CCC-----CCCCcc
Q psy18177 113 --G----SLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNYS------YPGD-AIMHIAAP----DLH-----PKYHYK 170 (220)
Q Consensus 113 --~----~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y~------~~~~-~p~hls~~----~~~-----~~~~~~ 170 (220)
+ .++|.++..+ +++++|+.|.||++.++|..|- +..+ .....|.. ..+ +..-|.
T Consensus 80 ~ia~hyk~aln~vF~~~----~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~NdnG~~~~~~~~~~~lyr 155 (334)
T cd02514 80 RIARHYKWALTQTFNLF----GYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAWNDNGKEHFVDDTPSLLYR 155 (334)
T ss_pred HHHHHHHHHHHHHHHhc----CCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEeeccCCcccccCCCcceEEE
Confidence 1 2566666544 7999999999999999975441 1111 11122211 000 111222
Q ss_pred --cccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHH--HHCCCeEeCCC
Q psy18177 171 --TFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRI--KEARIRIERPE 219 (220)
Q Consensus 171 --~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl--~~~G~~i~R~~ 219 (220)
.+.|..++++|+.+... ++ .|-.-|-|+..|+ +..|=...||+
T Consensus 156 s~ff~glGWml~r~~W~e~---~~---~wp~~~WD~w~R~~~~rkgr~cirPe 202 (334)
T cd02514 156 TDFFPGLGWMLTRKLWKEL---EP---KWPKAFWDDWMRLPEQRKGRECIRPE 202 (334)
T ss_pred ecCCCchHHHHHHHHHHHh---CC---CCCCCChHHhhcchhhhcCCccccCC
Confidence 23455668999999887 44 5655699999885 45665555653
No 64
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=97.96 E-value=1.8e-05 Score=67.31 Aligned_cols=71 Identities=17% Similarity=0.128 Sum_probs=55.2
Q ss_pred ceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccC-----------------cccccchhhhhhHHHhhhcC
Q psy18177 65 ELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDS-----------------YRFNRGSLINVGFLYIQENT 127 (220)
Q Consensus 65 kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~-----------------~~FnR~~~lN~G~~~A~~~~ 127 (220)
++|||||+||.++.|..+|.++.. | ..+|+|++..+. ..-+.+.++|.|+..|
T Consensus 1 ~isvii~~~Ne~~~l~~~l~sl~~----~--~~eiivvD~gStD~t~~i~~~~~~~v~~~~~~g~~~~~n~~~~~a---- 70 (229)
T cd02511 1 TLSVVIITKNEERNIERCLESVKW----A--VDEIIVVDSGSTDRTVEIAKEYGAKVYQRWWDGFGAQRNFALELA---- 70 (229)
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhc----c--cCEEEEEeCCCCccHHHHHHHcCCEEEECCCCChHHHHHHHHHhC----
Confidence 589999999999999999998742 3 137888775321 1234568889999887
Q ss_pred CCceEEEeccccccCCCC
Q psy18177 128 HCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 128 ~~D~lif~DvDlip~~~~ 145 (220)
++|++++.|.|.++.++.
T Consensus 71 ~~d~vl~lDaD~~~~~~~ 88 (229)
T cd02511 71 TNDWVLSLDADERLTPEL 88 (229)
T ss_pred CCCEEEEEeCCcCcCHHH
Confidence 889999999999987764
No 65
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=97.91 E-value=0.00011 Score=73.13 Aligned_cols=148 Identities=15% Similarity=0.190 Sum_probs=90.5
Q ss_pred CCcceEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEE-ec------------------------cCcccccchh
Q psy18177 62 DQHELCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVN-QV------------------------DSYRFNRGSL 115 (220)
Q Consensus 62 ~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vve-q~------------------------~~~~FnR~~~ 115 (220)
..+.+||+||.+|=.+.+..++.++. .++. -+++|+|+- .+ ++.|=.|+++
T Consensus 69 ~~~~vsIlVPa~nE~~VI~~~v~~ll---~~ldYp~~~I~v~~~~nD~~T~~~~~~~~~~~p~~~~v~~~~~gp~gKa~A 145 (703)
T PRK15489 69 DEQPLAIMVPAWKEYDVIAKMIENML---ATLDYRRYVIFVGTYPNDAETITEVERMRRRYKRLVRVEVPHDGPTCKADC 145 (703)
T ss_pred CCCceEEEEeCCCcHHHHHHHHHHHH---hcCCCCCeEEEEEecCCCccHHHHHHHHhccCCcEEEEEcCCCCCCCHHHH
Confidence 45689999999999999999998863 2322 246676632 11 1234458899
Q ss_pred hhhhHHHhhh-----cCCCceEEEeccccccCCCCccc---cCCCC----ceee-e--------ec---CC---CCC---
Q psy18177 116 INVGFLYIQE-----NTHCDFIAMHDVDLIPINPRLNY---SYPGD----AIMH-I--------AA---PD---LHP--- 165 (220)
Q Consensus 116 lN~G~~~A~~-----~~~~D~lif~DvDlip~~~~~~y---~~~~~----~p~h-l--------s~---~~---~~~--- 165 (220)
+|.|+..+.+ ...+|.+++||+|-+|+++...+ ..+.. .|.. + +. .+ .+.
T Consensus 146 LN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~~L~~~~~~~~~~~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l 225 (703)
T PRK15489 146 LNWIIQAIFRYEAGHGIEFAGVILHDSEDVLHPLELKYFNYLLPRKDLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDL 225 (703)
T ss_pred HHHHHHHHHhhhhhccCccceEEEEcCCCCCChhHHHHHHhhcCCcceeeeeeccCCCccccHHHHHHHHHHHHHhhhHH
Confidence 9999987532 22356699999999999986422 11111 1110 0 00 00 000
Q ss_pred ----CCCccccccc-ccccchhhhhhc---CCCCCCCccCC----CCcHHHHHHHHHCCCeEe
Q psy18177 166 ----KYHYKTFLGG-ILMMKNEHFQTV---NGLSNKYWGWG----LEDDELYVRIKEARIRIE 216 (220)
Q Consensus 166 ----~~~~~~~~GG-~~~i~kedf~kV---nGfde~f~GWG----gED~Dl~~Rl~~~G~~i~ 216 (220)
+..-.-..|| .++++|+....+ ||-+ +|. -||.|+..|+...|++..
T Consensus 226 ~~r~~l~~~ipl~Gv~~~frr~aL~~l~~~gg~~----~~n~~sLTED~Dlg~RL~~~G~r~~ 284 (703)
T PRK15489 226 VVRESLTGTVPSAGVGTCFSRRALLALMKERGNQ----PFNTSSLTEDYDFSFRLAELGMQEI 284 (703)
T ss_pred HHHHHcCCceeccCcceeeeHHHHHHHHHhcCCC----CCCCCCchHhHHHHHHHHHCCCceE
Confidence 0111123456 456666665555 6533 444 499999999999999874
No 66
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=97.85 E-value=3.9e-05 Score=63.33 Aligned_cols=74 Identities=16% Similarity=0.168 Sum_probs=54.6
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccC-------------------------cccccchhhhhhHHH
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDS-------------------------YRFNRGSLINVGFLY 122 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~-------------------------~~FnR~~~lN~G~~~ 122 (220)
||||+||..+.|..+|.++.. |..+++|+|+++... ..-.|+.++|.|++.
T Consensus 1 ViIp~~Ne~~~l~~~l~sl~~----~~~~~eIivvdd~S~D~t~~~~~~~~~~~~v~~i~~~~~~~~~Gk~~aln~g~~~ 76 (191)
T cd06436 1 VLVPCLNEEAVIQRTLASLLR----NKPNFLVLVIDDASDDDTAGIVRLAITDSRVHLLRRHLPNARTGKGDALNAAYDQ 76 (191)
T ss_pred CEEeccccHHHHHHHHHHHHh----CCCCeEEEEEECCCCcCHHHHHhheecCCcEEEEeccCCcCCCCHHHHHHHHHHH
Confidence 699999999999999999753 335678888764211 012367899999998
Q ss_pred hhhc-------CCCceEEEeccccccCCCC
Q psy18177 123 IQEN-------THCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 123 A~~~-------~~~D~lif~DvDlip~~~~ 145 (220)
|... .++|+++++|+|.++.++.
T Consensus 77 ~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~ 106 (191)
T cd06436 77 IRQILIEEGADPERVIIAVIDADGRLDPNA 106 (191)
T ss_pred HhhhccccccCCCccEEEEECCCCCcCHhH
Confidence 7321 1358999999999988875
No 67
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=97.51 E-value=0.00036 Score=59.99 Aligned_cols=138 Identities=14% Similarity=0.198 Sum_probs=71.6
Q ss_pred eEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcccccchhhhhhHHHhhhcCCCceEEEeccccccCCCC
Q psy18177 66 LCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYIQENTHCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 66 vsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~FnR~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~ 145 (220)
+||||.+.+ ++.+..+++++++. +..+.+.+-+.-..+ ..+-+.+.|.|+++| +++|++|..-|+...+..
T Consensus 1 isiI~c~n~-~~~~~~~~~~i~~~---~~~~~~~i~i~~~~~-~~s~~~~yN~a~~~a----~~~ylvflHqDv~i~~~~ 71 (217)
T PF13712_consen 1 ISIIICVND-EELYEECLRSIKRL---IGPPGELIEIDNVRN-AKSMAAAYNEAMEKA----KAKYLVFLHQDVFIINEN 71 (217)
T ss_dssp EEEEEEES--HHHHHHHHHHHHHT---T--TEEEEEEE-SSS--S-TTTHHHHHGGG------SSEEEEEETTEE-SSHH
T ss_pred CEEEEEECC-HHHHHHHHHHHHhh---CCCCceEEEEeccCC-CcCHHHHHHHHHHhC----CCCEEEEEeCCeEEcchh
Confidence 577777554 55688888886431 234555554443333 388899999999987 999999999999766532
Q ss_pred cc------c-c--------------CCCCce-----e-------eeec-----C----CCC---CC----CCcccccccc
Q psy18177 146 LN------Y-S--------------YPGDAI-----M-------HIAA-----P----DLH---PK----YHYKTFLGGI 176 (220)
Q Consensus 146 ~~------y-~--------------~~~~~p-----~-------hls~-----~----~~~---~~----~~~~~~~GG~ 176 (220)
.. . . .+..++ . ..+. . ... +. .+....=|..
T Consensus 72 ~l~~il~~~~~~~~~G~iGvaG~~~~~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~avDg~l 151 (217)
T PF13712_consen 72 WLEDILEIFEEDPNIGMIGVAGSKRLPPNGVWWESPNKVGKVREYGRIMHGHGPNSAGEVRYGGPRNDPPEEVQAVDGLL 151 (217)
T ss_dssp HHHHHHHHHHH-TTEEEEESEEEESS-S-TTS---EEEEEETTEEEE----E-------------ES-SSEEEEEE-TTE
T ss_pred HHHHHHHHHhhCCCccEEEeecCCcCCCCCcccccccccccccccccccccccccccccccccccccCCceeEEEecceE
Confidence 00 0 0 000000 0 0000 0 000 00 0111223455
Q ss_pred cccchhhhhhcCCCCCC-CccCCCCcHHHHHHHHHCCCeEe
Q psy18177 177 LMMKNEHFQTVNGLSNK-YWGWGLEDDELYVRIKEARIRIE 216 (220)
Q Consensus 177 ~~i~kedf~kVnGfde~-f~GWGgED~Dl~~Rl~~~G~~i~ 216 (220)
+++.|+-+ +|||. |.||-.-|.|+..++..+|.++.
T Consensus 152 l~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v~ 188 (217)
T PF13712_consen 152 LATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRVV 188 (217)
T ss_dssp EEEETTB---------SS--SSSSHHHHHHHHHHHTT-EEE
T ss_pred EEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEEE
Confidence 55555555 99999 99999999999999999999985
No 68
>KOG3738|consensus
Probab=97.19 E-value=0.00036 Score=65.28 Aligned_cols=148 Identities=18% Similarity=0.215 Sum_probs=91.9
Q ss_pred cCCCcceEEEEEecC--CHHHHHHHHHHHHHHhhhc--CcceeEEEEEeccCc--------ccc------------cchh
Q psy18177 60 LHDQHELCLIIPFRD--RFDELLIFLMHMKVFLERQ--NIVYNVYVVNQVDSY--------RFN------------RGSL 115 (220)
Q Consensus 60 ~~~~~kvsVIIP~r~--R~~~L~~~L~~l~~~L~~q--~~~~~I~Vveq~~~~--------~Fn------------R~~~ 115 (220)
|...+..||||.|.| |..-|+.+. + .|.+. .+=.||+.|++...+ ... --+.
T Consensus 120 ~~dlp~TsviITfHNEARS~LLRTv~-S---vlnrsP~~li~EiILVDD~S~Dped~~~L~ri~kvr~LRN~~ReGLirS 195 (559)
T KOG3738|consen 120 KVDLPPTSVIITFHNEARSTLLRTVV-S---VLNRSPEHLIHEIILVDDFSQDPEDGKLLKRIPKVRVLRNNEREGLIRS 195 (559)
T ss_pred ecCCCCceEEEEeccHHHHHHHHHHH-H---HHcCChHHhhheeEEecCCCCChHHHHHHhhhheeeeecccchhhhhhh
Confidence 445678899999998 444333333 3 34442 244678887753210 011 1256
Q ss_pred hhhhHHHhhhcCCCceEEEeccccccCCCC------------ccccCC-------------CC-----c----eeeeecC
Q psy18177 116 INVGFLYIQENTHCDFIAMHDVDLIPINPR------------LNYSYP-------------GD-----A----IMHIAAP 161 (220)
Q Consensus 116 lN~G~~~A~~~~~~D~lif~DvDlip~~~~------------~~y~~~-------------~~-----~----p~hls~~ 161 (220)
++.|+..| .+.++-|.|.-|=...+- ....+| +. + ..|+.-.
T Consensus 196 RvrGAdvA----~a~vltFLDSHcEvN~~WLePLL~Rvaed~trvVsPiiDvIn~dnf~Y~~asadLrGGFDWsLhF~We 271 (559)
T KOG3738|consen 196 RVRGADVA----QATVLTFLDSHCEVNEGWLEPLLERVAEDTTRVVSPIIDVINLDNFSYVGASADLRGGFDWSLHFKWE 271 (559)
T ss_pred hccccccc----cceEEEEEecceeecchhhHHHHHHHhhcccceeecccccccccccccccchhhhcCCcceEEEEEeh
Confidence 68898887 888999999988422110 000000 00 0 1122100
Q ss_pred ---------CCCCCCCc--ccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeE
Q psy18177 162 ---------DLHPKYHY--KTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRI 215 (220)
Q Consensus 162 ---------~~~~~~~~--~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i 215 (220)
..+|..|+ ..+.||.++|.|+=|.+.|-||....=||||..|+..|+-.-|-.+
T Consensus 272 ~~~~eqr~sr~~Pt~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGsl 336 (559)
T KOG3738|consen 272 QMQLEQRESRADPTAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSL 336 (559)
T ss_pred hcCHHHHhhccCCCCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCee
Confidence 01233344 3578999999999999999999999999999999998887766544
No 69
>KOG2978|consensus
Probab=97.15 E-value=0.00059 Score=58.23 Aligned_cols=153 Identities=15% Similarity=0.185 Sum_probs=91.3
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCc---------------------ccccchhhhhhHH
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSY---------------------RFNRGSLINVGFL 121 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~---------------------~FnR~~~lN~G~~ 121 (220)
..+-|||+|+||-.++|..++.-++.++....++++|+++++...+ +=.+-..+-.|..
T Consensus 2 ~~kYsvilPtYnEk~Nlpi~~~li~~~~~e~~~~~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~l~pR~~klGLgtAy~ 81 (238)
T KOG2978|consen 2 SIKYSVILPTYNEKENLPIITRLIAKYMSEEGKKYEIIIVDDASPDGTQEVAKALQKIYGEDNILLKPRTKKLGLGTAYI 81 (238)
T ss_pred CcceeEEeccccCCCCCeeeHHHHHhhhhhhcCceEEEEEeCCCCCccHHHHHHHHHHhCCCcEEEEeccCcccchHHHH
Confidence 3578999999999999998888888888888899999999864210 1111122333444
Q ss_pred HhhhcCCCceEEEeccccccCCCCcc----------c------cCCCCc-ee-------eeecCC-C--CCCC-Cccccc
Q psy18177 122 YIQENTHCDFIAMHDVDLIPINPRLN----------Y------SYPGDA-IM-------HIAAPD-L--HPKY-HYKTFL 173 (220)
Q Consensus 122 ~A~~~~~~D~lif~DvDlip~~~~~~----------y------~~~~~~-p~-------hls~~~-~--~~~~-~~~~~~ 173 (220)
++++.+++|++++.|+|+--++.++. | +|.+.+ .- .+|... + .+-+ +-....
T Consensus 82 hgl~~a~g~fiviMDaDlsHhPk~ipe~i~lq~~~~~div~GTRYa~~ggV~gW~mkRk~IS~gAn~la~~ll~~~~sdl 161 (238)
T KOG2978|consen 82 HGLKHATGDFIVIMDADLSHHPKFIPEFIRLQKEGNYDIVLGTRYAGGGGVYGWDMKRKIISRGANFLARILLNPGVSDL 161 (238)
T ss_pred hhhhhccCCeEEEEeCccCCCchhHHHHHHHhhccCcceeeeeeEcCCCceecchhhHHHHhhhhHHHHHHhccCCCccC
Confidence 44445599999999999976655421 0 011100 00 011000 0 0000 223455
Q ss_pred ccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEe
Q psy18177 174 GGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIE 216 (220)
Q Consensus 174 GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~ 216 (220)
.|.+-++|.+.+..+--+-.=.|+- =-.|+..|+...|+.|.
T Consensus 162 tGsFrLykk~vl~~li~e~vSkGyv-fqmEll~ra~~~~y~Ig 203 (238)
T KOG2978|consen 162 TGSFRLYKKEVLEKLIEESVSKGYV-FQMELLARARQHGYTIG 203 (238)
T ss_pred cceeeeehHHHHHhhHHHhhccchh-hhHHHHHhccccCceEe
Confidence 6778888888776653333223322 34678888888887764
No 70
>KOG3737|consensus
Probab=96.93 E-value=0.00076 Score=63.11 Aligned_cols=49 Identities=24% Similarity=0.278 Sum_probs=44.2
Q ss_pred ccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 170 KTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 170 ~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
.+..||.+++.|+-|...|-||+...=||||..|+..++-.-|-+|...
T Consensus 331 PthAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCGG~i~fV 379 (603)
T KOG3737|consen 331 PTHAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCGGKILFV 379 (603)
T ss_pred cccccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeCCEEEEE
Confidence 4578999999999999999999999999999999998888888777654
No 71
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=96.56 E-value=0.0034 Score=52.09 Aligned_cols=90 Identities=19% Similarity=0.294 Sum_probs=60.3
Q ss_pred CCCceEEEeccccccCCCCccc-----cCCCCc-----eeeeecC-----------CCCC-----CCCcccccccccccc
Q psy18177 127 THCDFIAMHDVDLIPINPRLNY-----SYPGDA-----IMHIAAP-----------DLHP-----KYHYKTFLGGILMMK 180 (220)
Q Consensus 127 ~~~D~lif~DvDlip~~~~~~y-----~~~~~~-----p~hls~~-----------~~~~-----~~~~~~~~GG~~~i~ 180 (220)
+++|++++.|.|+.++++.... .-++.+ |.-.... .+++ .......+|+.+++.
T Consensus 30 a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~G~~m~~r 109 (175)
T PF13506_consen 30 AKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPRGVPARGFWSRLEAAFFNFLPGVLQALGGAPFAWGGSMAFR 109 (175)
T ss_pred CCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEecccccCCcCHHHHHHHHHHhHHHHHHHHhcCCCceecceeeeE
Confidence 5999999999999988774211 111111 1100000 0010 012345789999999
Q ss_pred hhhhhhcCCCCC--CCccCCCCcHHHHHHHHHCCCeEeCCC
Q psy18177 181 NEHFQTVNGLSN--KYWGWGLEDDELYVRIKEARIRIERPE 219 (220)
Q Consensus 181 kedf~kVnGfde--~f~GWGgED~Dl~~Rl~~~G~~i~R~~ 219 (220)
|+.+.++|||+. ++. .||..+..++...|+++.-++
T Consensus 110 r~~L~~~GG~~~l~~~l---adD~~l~~~~~~~G~~v~~~~ 147 (175)
T PF13506_consen 110 REALEEIGGFEALADYL---ADDYALGRRLRARGYRVVLSP 147 (175)
T ss_pred HHHHHHcccHHHHhhhh---hHHHHHHHHHHHCCCeEEEcc
Confidence 999999999977 333 599999999999999997543
No 72
>KOG2977|consensus
Probab=96.35 E-value=0.046 Score=49.36 Aligned_cols=168 Identities=18% Similarity=0.205 Sum_probs=88.8
Q ss_pred ccceeecCCCCCCC---CCC--CcCCCcceEEEEEecCCHH----HHHHHHHHHHH-HhhhcCcceeEEEEEeccC----
Q psy18177 42 VQGCDCNSVGGSLL---SQS--TLHDQHELCLIIPFRDRFD----ELLIFLMHMKV-FLERQNIVYNVYVVNQVDS---- 107 (220)
Q Consensus 42 ~~~~~~~~~~~~~~---~~~--~~~~~~kvsVIIP~r~R~~----~L~~~L~~l~~-~L~~q~~~~~I~Vveq~~~---- 107 (220)
++.|.|...+++.- .|+ +....+-+|||||.||-+. .|...+++++. ++......++|+|++++..
T Consensus 40 ~e~ei~~~d~g~~k~~~lp~~~d~~~~~~lsVIVpaynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~ 119 (323)
T KOG2977|consen 40 EETEITLDDPGSIKSRTLPNIRDSPEKMYLSVIVPAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTV 119 (323)
T ss_pred cceEEEEcCCCCccceeCcccccChhhceeEEEEecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHH
Confidence 35555554322221 443 3333447999999998654 45555666553 2222345799999875321
Q ss_pred -------------------cccc--cchhhhhhHHHhhhcCCCceEEEeccccccCC-C--Ccc---c-cC-CCC-----
Q psy18177 108 -------------------YRFN--RGSLINVGFLYIQENTHCDFIAMHDVDLIPIN-P--RLN---Y-SY-PGD----- 153 (220)
Q Consensus 108 -------------------~~Fn--R~~~lN~G~~~A~~~~~~D~lif~DvDlip~~-~--~~~---y-~~-~~~----- 153 (220)
..=| ||-+.-.|+..+ .++++.|.|+|=-..- | ... . .- |..
T Consensus 120 ~~a~k~s~K~~~d~irV~~l~~nrgKGgAvR~g~l~~----rG~~ilfadAdGaTkf~d~ekLe~al~~~~~p~~r~~va 195 (323)
T KOG2977|consen 120 EVALKFSRKLGDDNIRVIKLKKNRGKGGAVRKGMLSS----RGQKILFADADGATKFADLEKLEKALNDKAGPGPRDDVA 195 (323)
T ss_pred HHHHHHHHHcCcceEEEeehhccCCCCcceehhhHhc----cCceEEEEcCCCCccCCCHHHHHHHHHhhcCCCCCCcee
Confidence 1112 334445677766 8999999999963211 1 000 0 00 110
Q ss_pred --ceeeeec-CC-----C-CC--CCCc---------c---cccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHH
Q psy18177 154 --AIMHIAA-PD-----L-HP--KYHY---------K---TFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKE 210 (220)
Q Consensus 154 --~p~hls~-~~-----~-~~--~~~~---------~---~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~ 210 (220)
.+.|+.. +. + .. .+.| + ..-=|...++|+...++=-. -.+.+|- -|.|+..=.+.
T Consensus 196 ~GsrahLe~~~a~a~rs~~r~iLM~gFH~lv~~~a~rsI~DTQcgfklftR~aa~~if~~-lh~e~W~-fdvEll~La~~ 273 (323)
T KOG2977|consen 196 CGSRAHLENTEAVAKRSVIRNILMYGFHKLVWIFAIRSIRDTQCGFKLFTRAAARRIFPW-LHVERWA-FDVELLYLAKR 273 (323)
T ss_pred ecCHHHhhccHHHHHHhHhhHHHHHHHHHHHHHHhcCcccccchhHHHhHHHHHHhhcch-hheeeee-ccHHHHHHHHH
Confidence 1334432 10 0 00 0111 1 11126778899998888543 3677887 68887665555
Q ss_pred CCCeE
Q psy18177 211 ARIRI 215 (220)
Q Consensus 211 ~G~~i 215 (220)
.++++
T Consensus 274 ~~ipi 278 (323)
T KOG2977|consen 274 FTIPI 278 (323)
T ss_pred cCCCc
Confidence 55544
No 73
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=96.30 E-value=0.0043 Score=50.59 Aligned_cols=47 Identities=26% Similarity=0.411 Sum_probs=39.1
Q ss_pred cccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCCC
Q psy18177 171 TFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPE 219 (220)
Q Consensus 171 ~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~ 219 (220)
...|.+.++.++.+.++|||| ...-.| ||.|+..|+..+|.++...+
T Consensus 71 ~~~G~~~~~r~~~l~~vg~~~-~~~~~~-ED~~l~~~l~~~G~~~~~~~ 117 (193)
T PF13632_consen 71 FLSGSGMLFRREALREVGGFD-DPFSIG-EDMDLGFRLRRAGYRIVYVP 117 (193)
T ss_pred cccCcceeeeHHHHHHhCccc-cccccc-chHHHHHHHHHCCCEEEEec
Confidence 357888999999999999999 333344 99999999999999987554
No 74
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=95.17 E-value=0.052 Score=49.79 Aligned_cols=73 Identities=25% Similarity=0.407 Sum_probs=54.0
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEec-----------------------------cCcccccc
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQV-----------------------------DSYRFNRG 113 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~-----------------------------~~~~FnR~ 113 (220)
...|-|+||.-. .+|-.||..+++++++ |+++|+.+. ..-+|+-.
T Consensus 7 ~~~~divi~~~~--~~l~~~~~~wr~~~~~----~hliiv~d~~~~~~~~~p~g~~~~~y~~~di~~~lg~~~~i~~~~~ 80 (348)
T PF03214_consen 7 DDEVDIVIPALR--PNLTDFLEEWRPFFSP----YHLIIVQDPDPNEEIKVPEGFDYEVYNRNDIERVLGAKTLIPFKGD 80 (348)
T ss_pred cCcccEEeeccc--ccHHHHHHHHHHhhcc----eeEEEEeCCCccccccCCcccceeeecHhhHHhhcCCccccccccc
Confidence 346788998643 1466888899998874 555554321 11377777
Q ss_pred hhhhhhHHHhhhcCCCceEEEeccccccCCCC
Q psy18177 114 SLINVGFLYIQENTHCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 114 ~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~ 145 (220)
..+|.|+..| +.+|+++.|-|++|++|.
T Consensus 81 a~R~fGyL~s----~~~yivsiDDD~~P~~D~ 108 (348)
T PF03214_consen 81 ACRNFGYLVS----KKDYIVSIDDDCLPAKDD 108 (348)
T ss_pred chhhhHhhhc----ccceEEEEccccccccCC
Confidence 8899999988 669999999999999874
No 75
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=93.62 E-value=0.21 Score=45.98 Aligned_cols=75 Identities=21% Similarity=0.329 Sum_probs=49.7
Q ss_pred CCcceEEEEEecCCHHHHHHHHHHHHHHhhhcC------------------cceeEEEEEecc--------Ccccccchh
Q psy18177 62 DQHELCLIIPFRDRFDELLIFLMHMKVFLERQN------------------IVYNVYVVNQVD--------SYRFNRGSL 115 (220)
Q Consensus 62 ~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~------------------~~~~I~Vveq~~--------~~~FnR~~~ 115 (220)
-...+.||||+=... .||+.+.++|++-. +++++|-.++.+ --+|+-...
T Consensus 9 ~~~evdIVi~TI~~~----~fL~~~r~~l~~~h~iiV~d~D~~~~~~~~~G~d~~vy~r~d~~~~Lg~~~~~Ip~~~~a~ 84 (346)
T PLN03180 9 LKDELDIVIPTIRNL----DFLEMWRPFFQPYHLIIVQDGDPSKEIKVPEGFDYELYNRNDINRILGPKASCISFKDSAC 84 (346)
T ss_pred CCCcceEEEeccCch----hHHHHHHHhcCcccEEEEecCCcccceeccCCCceeecCHHHHHhhhcccccccccCcccc
Confidence 356789999993333 67777777666422 111111100000 136777888
Q ss_pred hhhhHHHhhhcCCCceEEEeccccccCCC
Q psy18177 116 INVGFLYIQENTHCDFIAMHDVDLIPINP 144 (220)
Q Consensus 116 lN~G~~~A~~~~~~D~lif~DvDlip~~~ 144 (220)
+|.|+..+ +.+|+++.|-|++|.++
T Consensus 85 R~fGyL~s----~~~yivsiDDD~~Pa~d 109 (346)
T PLN03180 85 RCFGYLVS----KKKYIFTIDDDCFVAKD 109 (346)
T ss_pred hhhhheee----cceEEEEECCCCCCCCC
Confidence 99999987 68999999999999987
No 76
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=85.98 E-value=0.49 Score=42.99 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=26.9
Q ss_pred cccchhhhhhHHHhhhcCCCceEEEeccccccCCCC
Q psy18177 110 FNRGSLINVGFLYIQENTHCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 110 FnR~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~ 145 (220)
+.--.+||+|.+.| .++++++.|+|++|..++
T Consensus 113 YPiN~LRNvAr~~a----~T~~v~~~DvD~~ps~~l 144 (317)
T PF13896_consen 113 YPINLLRNVARSGA----RTDYVFLLDVDFLPSPGL 144 (317)
T ss_pred CChHHHHHHHHHhc----CcceEEEecceeeeCcch
Confidence 33346889999987 899999999999999874
No 77
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=73.46 E-value=6.1 Score=37.76 Aligned_cols=85 Identities=12% Similarity=0.093 Sum_probs=41.1
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccC-------ccc------------c---cc-h---h-
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDS-------YRF------------N---RG-S---L- 115 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~-------~~F------------n---R~-~---~- 115 (220)
...+.|+|-.+||+++|+++|+.|...- ...-.|.|+|..+.++ ..| . .. + .
T Consensus 92 ~~~~pVlV~AcNRp~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~~~vi~~y~~~v~~i~~~~~~~i~~~~~~~~~~ 170 (434)
T PF03071_consen 92 EPVIPVLVFACNRPDYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEVAEVIKSYGDQVTYIQHPDFSPITIPPKEKKFK 170 (434)
T ss_dssp -----EEEEESS-TT-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHHHHHHHGGGGGSEEEE-S--S-----TT-GGGH
T ss_pred CCcceEEEEecCCcHHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHHHHHHHHhhhhheeeecCCcCCceeCccccccc
Confidence 3457899999999999999999986531 1112366665433211 011 0 00 0 0
Q ss_pred ----hhhhHHHh----hhcCCCceEEEeccccccCCCCccc
Q psy18177 116 ----INVGFLYI----QENTHCDFIAMHDVDLIPINPRLNY 148 (220)
Q Consensus 116 ----lN~G~~~A----~~~~~~D~lif~DvDlip~~~~~~y 148 (220)
+..-++.| ....+++.+|+..-|+...+||..|
T Consensus 171 ~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Y 211 (434)
T PF03071_consen 171 GYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEY 211 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHH
T ss_pred chHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHH
Confidence 00011111 1123678899999999999998655
No 78
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=72.43 E-value=38 Score=33.71 Aligned_cols=80 Identities=14% Similarity=0.176 Sum_probs=50.5
Q ss_pred CCcceEEEEEecCCH-----HHHHHHHHHHHHHhhhc--CcceeEEEEEecc----------------------Cccccc
Q psy18177 62 DQHELCLIIPFRDRF-----DELLIFLMHMKVFLERQ--NIVYNVYVVNQVD----------------------SYRFNR 112 (220)
Q Consensus 62 ~~~kvsVIIP~r~R~-----~~L~~~L~~l~~~L~~q--~~~~~I~Vveq~~----------------------~~~FnR 112 (220)
..++.+|++|.||-. ..|+..-+++ .+. --+|.++|+-++. ...|-|
T Consensus 142 ~~hrTAilmPiynEd~~rVfAgLrA~~eSl----a~Tg~~~~FD~FVLSDs~dpdialAEq~a~~~l~~e~~g~~~ifYR 217 (736)
T COG2943 142 DLHRTAILMPIYNEDVNRVFAGLRATYESL----AATGHAEHFDFFVLSDSRDPDIALAEQKAWAELCRELGGEGNIFYR 217 (736)
T ss_pred cccceeEEeeccccCHHHHHHHHHHHHHHH----HhhCCcccceEEEEcCCCCchhhhhHHHHHHHHHHHhCCCCceeee
Confidence 345699999999842 3333333333 232 2468888875432 236667
Q ss_pred chhhhhhHHHh------hh-cCCCceEEEeccccccCCCC
Q psy18177 113 GSLINVGFLYI------QE-NTHCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 113 ~~~lN~G~~~A------~~-~~~~D~lif~DvDlip~~~~ 145 (220)
-+..|++-+.- -. .+.++|++..|.|-+...+.
T Consensus 218 rRr~n~~RKaGNIaDfcrRwG~~Y~~MlVLDADSvMtgd~ 257 (736)
T COG2943 218 RRRRNVKRKAGNIADFCRRWGSAYSYMLVLDADSVMTGDC 257 (736)
T ss_pred hHhhhhcccccCHHHHHHHhCcccceEEEeecccccCchH
Confidence 77777764421 01 24679999999999988775
No 79
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=69.74 E-value=29 Score=31.11 Aligned_cols=88 Identities=9% Similarity=0.150 Sum_probs=56.3
Q ss_pred CCCCcCCCcceEEEEEecCCHHHHHHHHHHHHHHhh-h-----------------------------cC-----cce-eE
Q psy18177 56 SQSTLHDQHELCLIIPFRDRFDELLIFLMHMKVFLE-R-----------------------------QN-----IVY-NV 99 (220)
Q Consensus 56 ~~~~~~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~-~-----------------------------q~-----~~~-~I 99 (220)
++..-..+.+|-|++|.||-..+|..++..|..+-- + |. .+| .|
T Consensus 17 ~~~~~~~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~i 96 (269)
T PF03452_consen 17 TSDAARNKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRSI 96 (269)
T ss_pred CCcccccCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcceE
Confidence 445666778999999999998888888887654200 0 00 123 34
Q ss_pred EEEEeccCc--ccc----------------cchhhhhhHHHhhhcCCCceEEEeccccccCCC
Q psy18177 100 YVVNQVDSY--RFN----------------RGSLINVGFLYIQENTHCDFIAMHDVDLIPINP 144 (220)
Q Consensus 100 ~Vveq~~~~--~Fn----------------R~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~ 144 (220)
.|+.|+-.. +.. =|++||-....|++ ...+++.+.|+|++-.+.
T Consensus 97 tIl~~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~-p~~swVlWlDaDIv~~P~ 158 (269)
T PF03452_consen 97 TILRKDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALG-PWHSWVLWLDADIVETPP 158 (269)
T ss_pred EEEcCCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcC-CcccEEEEEecCcccCCh
Confidence 444432111 111 14788988888863 367899999999985543
No 80
>KOG2547|consensus
Probab=65.59 E-value=27 Score=33.09 Aligned_cols=144 Identities=16% Similarity=0.207 Sum_probs=84.5
Q ss_pred CCcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEE-EEEeccCc--------------------------ccccch
Q psy18177 62 DQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVY-VVNQVDSY--------------------------RFNRGS 114 (220)
Q Consensus 62 ~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~-Vveq~~~~--------------------------~FnR~~ 114 (220)
....||||-|.-+-.+||..-++. +...|--.||+. .+|..+|+ +-| .|
T Consensus 83 ~LPgVSiikPl~G~d~nl~~Nles---ffts~Y~~~ElLfcv~s~eDpAi~vv~~Ll~kyp~VdAklf~gG~~vg~n-pK 158 (431)
T KOG2547|consen 83 KLPGVSIIKPLKGVDPNLYHNLES---FFTSQYHKYELLFCVESSEDPAIEVVERLLKKYPNVDAKLFFGGEKVGLN-PK 158 (431)
T ss_pred CCCCceEEeecccCCchhHHhHHH---HHhhccCceEEEEEEccCCCcHHHHHHHHHhhCCCcceEEEEcccccccC-hh
Confidence 467899999999998887765544 566776678864 44443331 111 14
Q ss_pred hhh--hhHHHhhhcCCCceEEEeccccccCCCCccc-----cCCCC------ceee---------eecC---CCCCCC--
Q psy18177 115 LIN--VGFLYIQENTHCDFIAMHDVDLIPINPRLNY-----SYPGD------AIMH---------IAAP---DLHPKY-- 167 (220)
Q Consensus 115 ~lN--~G~~~A~~~~~~D~lif~DvDlip~~~~~~y-----~~~~~------~p~h---------ls~~---~~~~~~-- 167 (220)
+-| .|++.| ++|++.+.|.|+-..+|.+.- .-++. .|-- ++.- .-|+++
T Consensus 159 InN~mpgy~~a----~ydlvlisDsgI~m~pdtildm~t~M~shekmalvtq~py~~dr~Gf~atle~~~fgTsh~r~yl 234 (431)
T KOG2547|consen 159 INNMMPGYRAA----KYDLVLISDSGIFMKPDTILDMATTMMSHEKMALVTQTPYCKDRQGFDATLEQVYFGTSHPRIYL 234 (431)
T ss_pred hhccCHHHHHh----cCCEEEEecCCeeecCchHHHHHHhhhcccceeeecCCceeeccccchhhhhheeeccCCceEEE
Confidence 445 467766 999999999999888776321 00000 0100 0000 001221
Q ss_pred --Cc--cccccccc-ccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCe
Q psy18177 168 --HY--KTFLGGIL-MMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIR 214 (220)
Q Consensus 168 --~~--~~~~GG~~-~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~ 214 (220)
+. -..+||+. .+.|+.+...||. ..|.++=.||-=+.+-+...|++
T Consensus 235 ~~n~~~~~c~tgms~~mrK~~ld~~ggi-~~f~~yLaedyFaaksllSRG~k 285 (431)
T KOG2547|consen 235 SGNVLGFNCSTGMSSMMRKEALDECGGI-SAFGGYLAEDYFAAKSLLSRGWK 285 (431)
T ss_pred ccccccccccccHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHhhhhh
Confidence 00 12345555 4677888899988 45655567777676666666654
No 81
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.
Probab=65.31 E-value=30 Score=30.28 Aligned_cols=73 Identities=19% Similarity=0.117 Sum_probs=42.2
Q ss_pred EEEEEe-cCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCccc----------------ccchhhhhhHHHhhhcCCC
Q psy18177 67 CLIIPF-RDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRF----------------NRGSLINVGFLYIQENTHC 129 (220)
Q Consensus 67 sVIIP~-r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~F----------------nR~~~lN~G~~~A~~~~~~ 129 (220)
++||-+ +.|.+.|...+.+++ +...-.+|+|+|..++.+= +....+|.=+.-- ..-++
T Consensus 2 Tvvi~t~~~R~~~L~~~l~~l~----~~~~l~~IvVvWn~~~~~P~~~~~~~~~vpV~~~~~~~nsLnnRF~p~-~~i~T 76 (247)
T PF09258_consen 2 TVVINTSYKRSDLLKRLLRHLA----SSPSLRKIVVVWNNPNPPPPSSKWPSTGVPVRVVRSSRNSLNNRFLPD-PEIET 76 (247)
T ss_dssp EEEEEE-SS-HHHHHHHHHHHT----TSTTEEEEEEEEE-TS--THHHHHT---S-EEEEEESSHHGGGGGS---TT--S
T ss_pred EEEEEecccchHHHHHHHHHHH----cCCCCCeEEEEeCCCCCCCcccccCCCCceEEEEecCCccHHhcCcCc-cccCc
Confidence 678888 999999999999963 3333467888887643220 0112233333311 12377
Q ss_pred ceEEEeccccccCCC
Q psy18177 130 DFIAMHDVDLIPINP 144 (220)
Q Consensus 130 D~lif~DvDlip~~~ 144 (220)
|.++..|-|+....+
T Consensus 77 ~AVl~~DDDv~~~~~ 91 (247)
T PF09258_consen 77 DAVLSLDDDVMLSCD 91 (247)
T ss_dssp SEEEEEETTEEE-HH
T ss_pred ceEEEecCCcccCHH
Confidence 999999999865443
No 82
>PLN02893 Cellulose synthase-like protein
Probab=64.88 E-value=20 Score=36.49 Aligned_cols=34 Identities=15% Similarity=0.119 Sum_probs=26.7
Q ss_pred cccchhhhhhHHHhhhcCCCceEEEeccccccCC
Q psy18177 110 FNRGSLINVGFLYIQENTHCDFIAMHDVDLIPIN 143 (220)
Q Consensus 110 FnR~~~lN~G~~~A~~~~~~D~lif~DvDlip~~ 143 (220)
--||=++|++++.+-...++++++..|+|+.|.+
T Consensus 280 h~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~ 313 (734)
T PLN02893 280 HFKAGALNTLLRVSATMTNAPIILTLDCDMYSND 313 (734)
T ss_pred ccccchHHHHHHhhcccCCCCEEEEecCCcCCCc
Confidence 4578899999986422358999999999999754
No 83
>COG2115 XylA Xylose isomerase [Carbohydrate transport and metabolism]
Probab=61.10 E-value=9.9 Score=35.39 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHhhhcCcceeEEEEE---eccCcccccchhh-hhhHHHhhhcCCCceEEEeccccccCCCC
Q psy18177 76 FDELLIFLMHMKVFLERQNIVYNVYVVN---QVDSYRFNRGSLI-NVGFLYIQENTHCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 76 ~~~L~~~L~~l~~~L~~q~~~~~I~Vve---q~~~~~FnR~~~l-N~G~~~A~~~~~~D~lif~DvDlip~~~~ 145 (220)
.+||+--+.++|-|.-.-.-+|..=..+ |......-+|+.+ .+++... .+-..+|++|||+|+-|+...
T Consensus 40 ~dhLrFavayWHTf~~~G~DpFG~~t~~RPW~~~~~~md~Ak~kad~aFEff-~kL~vpyyCFHD~DvaPeG~~ 112 (438)
T COG2115 40 EEHLRFAVAYWHTFCWDGADPFGGGTFERPWQQPGDAMDLAKRKADVAFEFF-EKLGVPYYCFHDVDVAPEGAS 112 (438)
T ss_pred HHHHHHHHHHhhhhccCCCCCCCcccccCCccccccHHHHHHHHHHHHHHHH-HHhCCCeEeecccccCCCccc
Confidence 5899999999987654433334332222 0001112222222 2333322 124679999999999999764
No 84
>PF13087 AAA_12: AAA domain; PDB: 2XZO_A 2WJY_A 2WJV_A 2XZP_A 2GK6_A 2GK7_A 2GJK_A 2XZL_A.
Probab=53.95 E-value=11 Score=30.69 Aligned_cols=70 Identities=16% Similarity=0.175 Sum_probs=42.8
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHH-----h------hhcCcceeEEEEEeccC------cccccchhhhhhHHHhhh
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVF-----L------ERQNIVYNVYVVNQVDS------YRFNRGSLINVGFLYIQE 125 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~-----L------~~q~~~~~I~Vveq~~~------~~FnR~~~lN~G~~~A~~ 125 (220)
..+|.||.||+...+.|+..|...... + .-|+.+++++|+.-... .-++...-+|+|+.-|
T Consensus 112 ~~~I~Iitpy~~Q~~~i~~~l~~~~~~~~~~~~~v~Tvd~~QG~E~diVi~s~v~~~~~~~~~f~~~~~r~nVA~SRA-- 189 (200)
T PF13087_consen 112 PSSIGIITPYRAQVALIRKALRSRYPSSPIKDIKVSTVDSFQGQEADIVIVSLVRTNSSSNIGFLNDPNRLNVALSRA-- 189 (200)
T ss_dssp -GGEEEEES-HHHHHHHHHHHHHCSTCHHHHCSEEEEHHHHTT--EEEEEEEE---STTS-SGGGC-HHHHHHHHTSE--
T ss_pred cCCceEEcCchHHHHHHHHHHhhhccccccceEEEecHHHhccccceEEEEEeccCCccccccccCCcCeeeeeHHHH--
Confidence 578999999999999899888753211 0 11567888888765422 2344567789998877
Q ss_pred cCCCceEEEec
Q psy18177 126 NTHCDFIAMHD 136 (220)
Q Consensus 126 ~~~~D~lif~D 136 (220)
+.-++++-|
T Consensus 190 --k~~liiig~ 198 (200)
T PF13087_consen 190 --KSGLIIIGN 198 (200)
T ss_dssp --EEEEEEEE-
T ss_pred --hcCEEEEec
Confidence 666666655
No 85
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=49.28 E-value=69 Score=28.17 Aligned_cols=78 Identities=12% Similarity=0.090 Sum_probs=48.8
Q ss_pred ceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcc------ccc----chhhhhhHHHhh-----hcCCC
Q psy18177 65 ELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYR------FNR----GSLINVGFLYIQ-----ENTHC 129 (220)
Q Consensus 65 kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~------FnR----~~~lN~G~~~A~-----~~~~~ 129 (220)
.|.|-|=-.+-.+.-...|..|.+.|.+-++++.|...+...... -+| |++||.+.+-.. ....+
T Consensus 34 nv~vSIyE~~S~D~T~~~L~~L~~~L~~lgv~~~i~~~~~~~~~~~~~~~~~~RI~~LA~lRN~ALePL~~~~~~~~~~f 113 (241)
T PF11735_consen 34 NVFVSIYESGSWDGTKEALRALDAELDALGVPHSIVLSDITHRDEIERPPRLRRIEYLAELRNRALEPLYDLARKRGRRF 113 (241)
T ss_pred eEEEEEEeCCCCccHHHHHHHHHHHHHhCCCCeEEEeCCCcccccccccchhhhHHHHHHHHhHHHHHHHhhhhccCCCc
Confidence 344444334455666677777777788888888887754332222 233 689999987543 12356
Q ss_pred ceEEEeccccccCC
Q psy18177 130 DFIAMHDVDLIPIN 143 (220)
Q Consensus 130 D~lif~DvDlip~~ 143 (220)
|.++|.+ |.+...
T Consensus 114 d~VlfLN-DV~f~~ 126 (241)
T PF11735_consen 114 DKVLFLN-DVFFCP 126 (241)
T ss_pred CEEEEec-CcccCH
Confidence 8888886 655443
No 86
>PRK12465 xylose isomerase; Provisional
Probab=44.27 E-value=13 Score=35.55 Aligned_cols=69 Identities=14% Similarity=0.190 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHhhhcCcceeEEE---EEeccCcccccchhh-hhhHHHhhhcCCCceEEEeccccccCCCC
Q psy18177 76 FDELLIFLMHMKVFLERQNIVYNVYV---VNQVDSYRFNRGSLI-NVGFLYIQENTHCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 76 ~~~L~~~L~~l~~~L~~q~~~~~I~V---veq~~~~~FnR~~~l-N~G~~~A~~~~~~D~lif~DvDlip~~~~ 145 (220)
.+||+--+.++|-|...-.-+|.-=. -|+....+-.+|+++ .++|... .+-..+++.|||.|++|+...
T Consensus 47 ~ehlrFav~yWHtf~~~G~DpFG~~T~~rpw~~~~~~~~~Ak~k~daaFEf~-~kLG~~~~~FHD~D~~Peg~s 119 (445)
T PRK12465 47 AEHLRFAVAYWHSFCGNGADPFGPGTRAYPWDVGNTALARAEAKSDAAFEFF-TKLGVPYYCFHDIDLAPDADD 119 (445)
T ss_pred HHhhceeeeeeecCCCCCCCCCCCccCCCCcccCCCHHHHHHHHHHHHHHHH-HHhCCCeeeccccccCCCCCC
Confidence 35666666666654332221221100 022222234444444 3444432 234679999999999999763
No 87
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=41.29 E-value=1.3e+02 Score=21.39 Aligned_cols=14 Identities=21% Similarity=0.389 Sum_probs=12.0
Q ss_pred CCCceEEEeccccc
Q psy18177 127 THCDFIAMHDVDLI 140 (220)
Q Consensus 127 ~~~D~lif~DvDli 140 (220)
.+.|.+++.|+|=.
T Consensus 70 ~~~dWvl~~D~DEf 83 (97)
T PF13704_consen 70 FDADWVLFLDADEF 83 (97)
T ss_pred CCCCEEEEEeeeEE
Confidence 47899999999964
No 88
>KOG3765|consensus
Probab=41.16 E-value=15 Score=34.49 Aligned_cols=28 Identities=25% Similarity=0.368 Sum_probs=22.8
Q ss_pred hhhhhhHHHhhhcCCCceEEEeccccccCCCC
Q psy18177 114 SLINVGFLYIQENTHCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 114 ~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~ 145 (220)
..+|+|-+-| ++||..+.|+||+|+..+
T Consensus 181 l~RNvAr~ga----~t~~~l~sD~dm~~S~gl 208 (386)
T KOG3765|consen 181 LMRNVARKGA----NTDYMLMSDIDMVPSYGL 208 (386)
T ss_pred HHHHHHHhhc----CCCcEEEEeeeeeeccch
Confidence 3567776665 999999999999998665
No 89
>KOG2943|consensus
Probab=40.61 E-value=11 Score=33.70 Aligned_cols=35 Identities=23% Similarity=0.513 Sum_probs=26.4
Q ss_pred ccccccchhhhhh-----c-----CCCCCCCccCCCCcHHHHHHH
Q psy18177 174 GGILMMKNEHFQT-----V-----NGLSNKYWGWGLEDDELYVRI 208 (220)
Q Consensus 174 GG~~~i~kedf~k-----V-----nGfde~f~GWGgED~Dl~~Rl 208 (220)
=|+-.+.+++|.+ . |-+++.|.|+|.||+.|..-|
T Consensus 39 lgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViEL 83 (299)
T KOG2943|consen 39 LGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIEL 83 (299)
T ss_pred hcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEE
Confidence 3777888999987 3 446778899999998775443
No 90
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=38.79 E-value=14 Score=29.59 Aligned_cols=29 Identities=14% Similarity=0.051 Sum_probs=22.0
Q ss_pred ccccccccchhhhhhcCCCCCCCccCCCCcHHH
Q psy18177 172 FLGGILMMKNEHFQTVNGLSNKYWGWGLEDDEL 204 (220)
Q Consensus 172 ~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl 204 (220)
..|..++++|+.|++ +||++.=- .||.||
T Consensus 155 ~~G~~~~~rr~~l~~-~g~~~~~l---~ED~~~ 183 (183)
T cd06438 155 LGGTGMCFPWAVLRQ-APWAAHSL---TEDLEF 183 (183)
T ss_pred ecCchhhhHHHHHHh-CCCCCCCc---ccccCC
Confidence 467778899999999 88976322 588774
No 91
>PLN02923 xylose isomerase
Probab=38.00 E-value=18 Score=34.79 Aligned_cols=20 Identities=25% Similarity=0.313 Sum_probs=16.7
Q ss_pred cCCCceEEEeccccccCCCC
Q psy18177 126 NTHCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 126 ~~~~D~lif~DvDlip~~~~ 145 (220)
+-..+|+.|||+|++|+...
T Consensus 134 kLG~~y~cFHD~Dl~Peg~s 153 (478)
T PLN02923 134 KLGVDRWCFHDRDIAPDGKT 153 (478)
T ss_pred HhCCCeEccCccccCCCCCC
Confidence 34679999999999999763
No 92
>PRK14755 transcriptional regulatory protein PufK; Provisional
Probab=33.78 E-value=27 Score=19.79 Aligned_cols=16 Identities=25% Similarity=0.617 Sum_probs=12.1
Q ss_pred EEecC-CHHHHHHHHHH
Q psy18177 70 IPFRD-RFDELLIFLMH 85 (220)
Q Consensus 70 IP~r~-R~~~L~~~L~~ 85 (220)
||+|| |.+|...+|++
T Consensus 2 vpyrnprhqhvasvlrs 18 (26)
T PRK14755 2 VPYRNPRHQHVASVLRS 18 (26)
T ss_pred CCccCchHHHHHHHHHc
Confidence 68886 88888777754
No 93
>TIGR02630 xylose_isom_A xylose isomerase. Members of this family are the enzyme xylose isomerase (5.3.1.5), which interconverts D-xylose and D-xylulose.
Probab=33.28 E-value=21 Score=34.11 Aligned_cols=19 Identities=21% Similarity=0.420 Sum_probs=16.2
Q ss_pred CCCceEEEeccccccCCCC
Q psy18177 127 THCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 127 ~~~D~lif~DvDlip~~~~ 145 (220)
-..+|+.|||+|++|+.+.
T Consensus 90 Lg~~~~~FHD~D~~peg~~ 108 (434)
T TIGR02630 90 LGVPYYCFHDRDIAPEGAS 108 (434)
T ss_pred hCCCeeccCccccCCCCCC
Confidence 4679999999999999763
No 94
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=31.80 E-value=2.1e+02 Score=26.99 Aligned_cols=25 Identities=16% Similarity=0.266 Sum_probs=14.6
Q ss_pred hhhhhHHHhhhcCCCceEEEeccccc
Q psy18177 115 LINVGFLYIQENTHCDFIAMHDVDLI 140 (220)
Q Consensus 115 ~lN~G~~~A~~~~~~D~lif~DvDli 140 (220)
.+=.|+..| |...-+|+-|.|+|-.
T Consensus 147 GMiiGillA-k~~g~~YVGFvDADNy 171 (381)
T PF09488_consen 147 GMIIGILLA-KAPGKRYVGFVDADNY 171 (381)
T ss_dssp HHHHHHHHH-HHTT-SEEEE--TTBS
T ss_pred HHHHHHHHH-HhcCCceEeEeeccCC
Confidence 334566655 2356799999999974
No 95
>PTZ00441 sporozoite surface protein 2 (SSP2); Provisional
Probab=29.84 E-value=1.9e+02 Score=28.84 Aligned_cols=71 Identities=18% Similarity=0.199 Sum_probs=37.4
Q ss_pred hhhccchhHHHHHHHHHHHHHHHhccccccceeecCCCCCCCCCCCcCCCcceEEEEEe------cCCHHHHHHHHHHHH
Q psy18177 14 KLLRSNKILSILILLCLIITLLIILLINVQGCDCNSVGGSLLSQSTLHDQHELCLIIPF------RDRFDELLIFLMHMK 87 (220)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvsVIIP~------r~R~~~L~~~L~~l~ 87 (220)
|+|.+-+.|++++|+|+.+...--.- .+++.+ .....|+....+.|+|=. .++.+..+.|+..|.
T Consensus 2 ~~l~~~~~~~~~~l~~~~~~~~~~~~-~~d~~k--------~~e~vC~~~lDIvFLLD~SgSMg~~Nfle~AK~Fa~~LV 72 (576)
T PTZ00441 2 KLLQNKSYLLVVFLLYVSIFARGDNK-IVDEVK--------YREEVCNEEVDLYLLVDGSGSIGYHNWITHVIPMLMGLI 72 (576)
T ss_pred cccccccHHHHHHHHHhHHHhhcccc-cccccc--------cccccccCCceEEEEEeCCCccCCccHHHHHHHHHHHHH
Confidence 45556667777777766665443111 011111 122345556677777722 245566677777776
Q ss_pred HHhhhc
Q psy18177 88 VFLERQ 93 (220)
Q Consensus 88 ~~L~~q 93 (220)
..+..+
T Consensus 73 ~~l~Is 78 (576)
T PTZ00441 73 QQLNLS 78 (576)
T ss_pred HHhccC
Confidence 655433
No 96
>PRK05474 xylose isomerase; Provisional
Probab=29.47 E-value=27 Score=33.48 Aligned_cols=19 Identities=26% Similarity=0.497 Sum_probs=16.3
Q ss_pred CCCceEEEeccccccCCCC
Q psy18177 127 THCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 127 ~~~D~lif~DvDlip~~~~ 145 (220)
-..+++.|||.|++|+...
T Consensus 91 Lg~~~~~FHD~D~~peg~s 109 (437)
T PRK05474 91 LGVPYYCFHDVDVAPEGAS 109 (437)
T ss_pred hCCCeeccCccccCCCCCC
Confidence 3679999999999999763
No 97
>PLN03153 hypothetical protein; Provisional
Probab=28.44 E-value=1.5e+02 Score=29.20 Aligned_cols=106 Identities=17% Similarity=0.227 Sum_probs=58.6
Q ss_pred hhhhh--hHHHhhh--cCCCceEEEeccccccCCCCc---cccCCCCceeeeec-CCCC---CCCCccccc-ccccccch
Q psy18177 114 SLINV--GFLYIQE--NTHCDFIAMHDVDLIPINPRL---NYSYPGDAIMHIAA-PDLH---PKYHYKTFL-GGILMMKN 181 (220)
Q Consensus 114 ~~lN~--G~~~A~~--~~~~D~lif~DvDlip~~~~~---~y~~~~~~p~hls~-~~~~---~~~~~~~~~-GG~~~i~k 181 (220)
.++.+ -+.++++ ..+.+.++|.|-|..+..+.. +..++.++|..+-. .+.. ....+...+ ||-+++++
T Consensus 192 sa~rI~rmv~et~~~~~pd~kWfVf~DDDTyf~~~NLv~~Ls~YDptkp~YIGs~Se~~~qn~~f~~~fA~GGAG~~LSr 271 (537)
T PLN03153 192 SGLRISRIVLESFRLGLPDVRWFVLGDDDTIFNADNLVAVLSKYDPSEMVYVGGPSESHSANSYFSHNMAFGGGGIAISY 271 (537)
T ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEecCCccccHHHHHHHHhhcCCCCCEEecccccccccccccccccccCCceEEEcH
Confidence 34444 2344444 367899999999997654321 22344445554421 1111 111222233 46678999
Q ss_pred hhhhhcCCC----CCCCc-cCCCCcHHHHHHHHHCCCeEeCCCC
Q psy18177 182 EHFQTVNGL----SNKYW-GWGLEDDELYVRIKEARIRIERPEN 220 (220)
Q Consensus 182 edf~kVnGf----de~f~-GWGgED~Dl~~Rl~~~G~~i~R~~g 220 (220)
...+++-.+ .+.|. .|| +|.-+..=+...|+++.+-+|
T Consensus 272 PLae~L~~~~d~C~~rY~~~~~-gD~rL~~CL~elGV~LT~~~g 314 (537)
T PLN03153 272 PLAEALSRILDDCLDRYPKLYG-SDDRLHACITELGVPLSREPG 314 (537)
T ss_pred HHHHHHHHHhhhhhhhcccCCC-cHHHHHHHHHHcCCCceecCC
Confidence 544443222 12232 466 788899988999999887654
No 98
>KOG2791|consensus
Probab=28.37 E-value=1.4e+02 Score=28.16 Aligned_cols=40 Identities=10% Similarity=0.256 Sum_probs=30.7
Q ss_pred CCCcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEE
Q psy18177 61 HDQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVN 103 (220)
Q Consensus 61 ~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vve 103 (220)
.+..++-++|-+.||++-|+.++++|+. .|+++-...|+-
T Consensus 114 la~~~~vlV~qVHnRp~Ylr~lveSlrk---~kGI~~tLlifS 153 (455)
T KOG2791|consen 114 LAKDRVVLVLQVHNRPQYLRVLVESLRK---VKGISETLLIFS 153 (455)
T ss_pred cccceEEEEEEEcCcHHHHHHHHHHHHh---ccCccceEEEEe
Confidence 4567888999999999999999999863 466665555543
No 99
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=27.13 E-value=5.1e+02 Score=24.05 Aligned_cols=20 Identities=40% Similarity=0.512 Sum_probs=17.7
Q ss_pred CCCceEEEeccccccCCCCc
Q psy18177 127 THCDFIAMHDVDLIPINPRL 146 (220)
Q Consensus 127 ~~~D~lif~DvDlip~~~~~ 146 (220)
..+|++++.|+|=||.++.+
T Consensus 177 ~~dDliivSDvDEIP~p~~l 196 (356)
T PF04724_consen 177 QDDDLIIVSDVDEIPSPETL 196 (356)
T ss_pred CCCCEEEEcCcccccCHHHH
Confidence 57899999999999998764
No 100
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=25.83 E-value=1.9e+02 Score=27.42 Aligned_cols=26 Identities=15% Similarity=0.295 Sum_probs=18.1
Q ss_pred hhhhhhHHHhhhcCCCceEEEeccccc
Q psy18177 114 SLINVGFLYIQENTHCDFIAMHDVDLI 140 (220)
Q Consensus 114 ~~lN~G~~~A~~~~~~D~lif~DvDli 140 (220)
-.+=+|+..| |...-+|+-|.|+|-.
T Consensus 147 EGMiiG~lLA-k~~g~~YVGFiDADNy 172 (393)
T PRK14503 147 EGMIIGLLLA-KALGARYVGFVDADNY 172 (393)
T ss_pred hHHHHHHHHH-HHhCCCeEeEeecccC
Confidence 3444666665 2346799999999974
No 101
>PLN02458 transferase, transferring glycosyl groups
Probab=25.83 E-value=3.4e+02 Score=25.36 Aligned_cols=81 Identities=10% Similarity=0.096 Sum_probs=40.6
Q ss_pred CcCCCcceEEEEEecC-CHHHHHHHHHHHHHHhhhcCcceeEEEEEecc---------------------Cccccc--ch
Q psy18177 59 TLHDQHELCLIIPFRD-RFDELLIFLMHMKVFLERQNIVYNVYVVNQVD---------------------SYRFNR--GS 114 (220)
Q Consensus 59 ~~~~~~kvsVIIP~r~-R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~---------------------~~~FnR--~~ 114 (220)
+-.+...|=||.|+|. |..+...+. .|.+-|..-.-+..=+|||... ...|.. ++
T Consensus 107 ~~~~~rlIivVTPTY~rR~~Q~a~LT-RLahTL~lVp~pL~WIVVEd~~~t~~va~lLrrsGl~y~HL~~k~~~~~~~~r 185 (346)
T PLN02458 107 KLAPRRLVIIVTPISTKDRYQGVLLR-RLANTLRLVPPPLLWIVVEGQSDSEEVSEMLRKTGIMYRHLVFKENFTDPEAE 185 (346)
T ss_pred CCCCCceEEEECCCCCCcchhHHHHH-HHHHHHhcCCCCceEEEEeCCCCCHHHHHHHHHcCCceEEeccCCCCCCccch
Confidence 3444555788889998 654433322 2222222211134445555321 112322 22
Q ss_pred ---hhhhhHHHhhhcCCCceEEEeccccc
Q psy18177 115 ---LINVGFLYIQENTHCDFIAMHDVDLI 140 (220)
Q Consensus 115 ---~lN~G~~~A~~~~~~D~lif~DvDli 140 (220)
-+|.|.+.--+....-++.|.|-|=.
T Consensus 186 ~~~QRN~AL~~IR~h~l~GVVyFADDdNt 214 (346)
T PLN02458 186 LDHQRNLALRHIEHHKLSGIVHFAGLSNV 214 (346)
T ss_pred hHHHHHHHHHHHHhcCcCceEEEccCCCc
Confidence 38999886532233456777777743
No 102
>cd01135 V_A-ATPase_B V/A-type ATP synthase (non-catalytic) subunit B. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria. This subfamily consists of the non-catalytic beta subunit.
Probab=25.71 E-value=3e+02 Score=24.72 Aligned_cols=71 Identities=7% Similarity=0.009 Sum_probs=52.8
Q ss_pred cceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcccccchhhhhhHHHh--hhcC-CCceEEEecc
Q psy18177 64 HELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYI--QENT-HCDFIAMHDV 137 (220)
Q Consensus 64 ~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~FnR~~~lN~G~~~A--~~~~-~~D~lif~Dv 137 (220)
..+.|++..=.|.++...|+..+. ....++..++|+.+.++.+.-|-++--.|...| .... ..|++++.|.
T Consensus 101 ~~v~V~~~IGeR~rev~e~~~~~~---~~~~l~~tv~v~~t~~~~~~~r~~a~~~a~aiAEyfrd~~g~~VLl~~D~ 174 (276)
T cd01135 101 NFAVVFAAMGITMEDARFFKDDFE---ETGALERVVLFLNLANDPTIERIITPRMALTTAEYLAYEKGKHVLVILTD 174 (276)
T ss_pred CCEEEEEEeccccHHHHHHHHHhh---hcCCcceEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcC
Confidence 357788887789988888887753 444578899999999998888877777777666 2122 4688888874
No 103
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=25.51 E-value=1.9e+02 Score=27.19 Aligned_cols=26 Identities=15% Similarity=0.323 Sum_probs=18.0
Q ss_pred hhhhhhHHHhhhcCCCceEEEeccccc
Q psy18177 114 SLINVGFLYIQENTHCDFIAMHDVDLI 140 (220)
Q Consensus 114 ~~lN~G~~~A~~~~~~D~lif~DvDli 140 (220)
-.+=.|+..| |...-+|+-|.|+|-.
T Consensus 146 EGMiiG~lLA-k~~g~~YVGFiDaDNy 171 (381)
T TIGR02460 146 EGMLLGLLLA-KAIGAEYVGFVDADNY 171 (381)
T ss_pred hHHHHHHHHH-HHhCCceEeEeecccC
Confidence 3344666655 2346799999999974
No 104
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=25.34 E-value=2.3e+02 Score=27.31 Aligned_cols=68 Identities=19% Similarity=0.112 Sum_probs=40.4
Q ss_pred CcceEEEE-EecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcccccchhhhhhHHHhhhcCCCceEEEecccc
Q psy18177 63 QHELCLII-PFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYIQENTHCDFIAMHDVDL 139 (220)
Q Consensus 63 ~~kvsVII-P~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~FnR~~~lN~G~~~A~~~~~~D~lif~DvDl 139 (220)
.+++.||| |..++....+.+..-+.+.|+..+++++++.-+.. +.+...+-+.+ ...+|.+|..=+|=
T Consensus 111 ~kr~lvIvNP~SGkg~a~k~~~~~v~~~L~~~gi~~~v~~T~~~-------ghA~~la~~~~--~~~~D~VV~vGGDG 179 (481)
T PLN02958 111 PKRLLVFVNPFGGKKSASKIFFDVVKPLLEDADIQLTIQETKYQ-------LHAKEVVRTMD--LSKYDGIVCVSGDG 179 (481)
T ss_pred CcEEEEEEcCCCCCcchhHHHHHHHHHHHHHcCCeEEEEeccCc-------cHHHHHHHHhh--hcCCCEEEEEcCCC
Confidence 45666766 88776665555555566667777777776655532 22333333322 23578888776664
No 105
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=24.55 E-value=62 Score=24.75 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=25.7
Q ss_pred CCCCCCccCC--CCcHHHHHHHHHCCCeEeCC
Q psy18177 189 GLSNKYWGWG--LEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 189 Gfde~f~GWG--gED~Dl~~Rl~~~G~~i~R~ 218 (220)
|-+--+.||| .|+.+|..++..+|+++.=|
T Consensus 74 g~~~i~pGyg~lse~~~fa~~~~~~gi~fiGp 105 (110)
T PF00289_consen 74 GADAIHPGYGFLSENAEFAEACEDAGIIFIGP 105 (110)
T ss_dssp TESEEESTSSTTTTHHHHHHHHHHTT-EESSS
T ss_pred cCcccccccchhHHHHHHHHHHHHCCCEEECc
Confidence 7888899999 69999999999999988655
No 106
>PF08260 Kinin: Insect kinin peptide; InterPro: IPR013202 This entry represents neuropeptides that are the first members of the insect kinin-family isolated from the American cockroach. Their occurrence in the retrocerebral complex suggests a physiological role as a neurohormone. The C-terminal sequence Phe-X-Ser-Trp-Gly-NH2 characterised the peptides as members of the insect kinin family. Data suggest a possible involvement of insect kinins in water-balance by regulating the osmoregulation. Insect kinins also mediate visceral muscle contractile activity (myotropic activity) []. These peptides have lengths ranging from 6 to 14 amino acids [].
Probab=23.93 E-value=43 Score=14.24 Aligned_cols=7 Identities=29% Similarity=1.018 Sum_probs=4.2
Q ss_pred CCCccCC
Q psy18177 192 NKYWGWG 198 (220)
Q Consensus 192 e~f~GWG 198 (220)
..|..||
T Consensus 2 pafnswg 8 (8)
T PF08260_consen 2 PAFNSWG 8 (8)
T ss_pred ccccccC
Confidence 3566676
No 107
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=23.70 E-value=5e+02 Score=23.42 Aligned_cols=20 Identities=25% Similarity=0.441 Sum_probs=16.7
Q ss_pred cCCCceEEEeccccccCCCC
Q psy18177 126 NTHCDFIAMHDVDLIPINPR 145 (220)
Q Consensus 126 ~~~~D~lif~DvDlip~~~~ 145 (220)
..+.||++|.|||+++.+..
T Consensus 121 ~~e~DYlF~~dvd~~F~~~i 140 (271)
T cd02515 121 GHEVDYLFCMDVDMVFQGPF 140 (271)
T ss_pred cccCCEEEEeeCCceEeecC
Confidence 35889999999999987653
No 108
>TIGR03496 FliI_clade1 flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively.
Probab=23.41 E-value=3.5e+02 Score=25.61 Aligned_cols=68 Identities=15% Similarity=0.131 Sum_probs=50.0
Q ss_pred eEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcccccchhhhhhHHHh--hhcCCCceEEEec
Q psy18177 66 LCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYI--QENTHCDFIAMHD 136 (220)
Q Consensus 66 vsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~FnR~~~lN~G~~~A--~~~~~~D~lif~D 136 (220)
+.++.-.-.|.+++..|.+.+ +....++..++|+.+.++.+.-|-++-..|...| ......|++++.|
T Consensus 165 ~~vi~~iGer~~ev~e~~~~~---~~~~~~~~tvvv~~tsd~~~~~r~~a~~~a~tiAEyfr~~G~~Vll~~D 234 (411)
T TIGR03496 165 VVVVGLIGERGREVKEFIEDI---LGEEGLARSVVVAATADESPLMRLRAAFYATAIAEYFRDQGKDVLLLMD 234 (411)
T ss_pred EEEEEEEecChHHHHHHHHHH---hhCCCcceEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 445555557888888887764 4445578899999999988888888888887766 2234568999988
No 109
>PRK08972 fliI flagellum-specific ATP synthase; Validated
Probab=23.24 E-value=3.2e+02 Score=26.33 Aligned_cols=70 Identities=13% Similarity=0.109 Sum_probs=52.7
Q ss_pred ceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcccccchhhhhhHHHh--hhcCCCceEEEecc
Q psy18177 65 ELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYI--QENTHCDFIAMHDV 137 (220)
Q Consensus 65 kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~FnR~~~lN~G~~~A--~~~~~~D~lif~Dv 137 (220)
.+.||.-.=.|.++...|++.+ +....+...|+|+.+.++.+.-|-++--.|...| ......|++++.|.
T Consensus 189 dv~Vi~lIGER~rEv~efi~~~---l~~~~l~rtvvv~atsd~p~~~R~~a~~~A~tiAEyfrd~G~~VLl~~Ds 260 (444)
T PRK08972 189 DVIVVGLVGERGREVKEFIEEI---LGEEGRARSVVVAAPADTSPLMRLKGCETATTIAEYFRDQGLNVLLLMDS 260 (444)
T ss_pred CEEEEEEEcCChHHHHHHHHHh---hccCCcccEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 4666666668988888888775 5666688899999999998888888887777766 11235688888874
No 110
>KOG3987|consensus
Probab=23.22 E-value=1e+02 Score=27.21 Aligned_cols=24 Identities=29% Similarity=0.769 Sum_probs=18.8
Q ss_pred cccccccchhhhh---hcCCCCCCCccCCCCc
Q psy18177 173 LGGILMMKNEHFQ---TVNGLSNKYWGWGLED 201 (220)
Q Consensus 173 ~GG~~~i~kedf~---kVnGfde~f~GWGgED 201 (220)
+|.++.++-++|. ++|| ..||.||
T Consensus 87 rGsMFifSe~QF~klL~i~~-----p~w~~~~ 113 (288)
T KOG3987|consen 87 RGSMFIFSEEQFRKLLVIGG-----PAWGQEP 113 (288)
T ss_pred cCceEEecHHHHHHHHhcCC-----CccCCCC
Confidence 5688889999884 5788 5688877
No 111
>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.
Probab=22.71 E-value=1.9e+02 Score=24.35 Aligned_cols=36 Identities=8% Similarity=0.026 Sum_probs=21.2
Q ss_pred ccccchhhhhhHHHhhh-cCCCceEEEeccccccCCC
Q psy18177 109 RFNRGSLINVGFLYIQE-NTHCDFIAMHDVDLIPINP 144 (220)
Q Consensus 109 ~FnR~~~lN~G~~~A~~-~~~~D~lif~DvDlip~~~ 144 (220)
+++.-.|-=.+++.|++ ..++||+++.-++++|...
T Consensus 68 ~~S~v~A~l~ll~~al~~~~~~~y~~llSg~D~Pl~s 104 (244)
T PF02485_consen 68 GFSLVEATLNLLREALKRDGDWDYFILLSGQDYPLKS 104 (244)
T ss_dssp SHHHHHHHHHHHHHHHHH-S---EEEEEETTEEESS-
T ss_pred CccHHHHHHHHHHHHHhcCCCCcEEEEcccccccccc
Confidence 34333444456667776 5689999999999988765
No 112
>cd01134 V_A-ATPase_A V/A-type ATP synthase catalytic subunit A. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria.
Probab=22.66 E-value=3.9e+02 Score=25.19 Aligned_cols=73 Identities=14% Similarity=0.139 Sum_probs=52.3
Q ss_pred ceEEEEEecCCHHHHHHHHHHHHHH----hhhcCcceeEEEEEeccCcccccchhhhhhHHHh--hhcCCCceEEEecc
Q psy18177 65 ELCLIIPFRDRFDELLIFLMHMKVF----LERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYI--QENTHCDFIAMHDV 137 (220)
Q Consensus 65 kvsVIIP~r~R~~~L~~~L~~l~~~----L~~q~~~~~I~Vveq~~~~~FnR~~~lN~G~~~A--~~~~~~D~lif~Dv 137 (220)
.+.|++-.=.|.++...++.-+... +.+.-++..++|+.+.+..+..|-++.-.|+..| ......|++++.|.
T Consensus 184 dvvVyv~iGERg~Ev~e~l~ef~~l~~~~~~~~~m~rtvlV~nts~~p~~~R~~s~yta~tiAEYfrd~G~dVll~~Ds 262 (369)
T cd01134 184 DIVIYVGCGERGNEMTEVLEEFPELTDPVTGEPLMKRTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYNVALMADS 262 (369)
T ss_pred CEEEEEEeCCChHHHHHHHHHHHhhccccccCCccceEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 4666677778999988888876532 2233367888999999888788887777787766 22345688888763
No 113
>KOG1116|consensus
Probab=22.41 E-value=2.3e+02 Score=28.29 Aligned_cols=80 Identities=18% Similarity=0.159 Sum_probs=60.3
Q ss_pred CCCCcCCCcceEEEE-EecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcccccchhhhhhHHHhhhcCCCceEEE
Q psy18177 56 SQSTLHDQHELCLII-PFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYIQENTHCDFIAM 134 (220)
Q Consensus 56 ~~~~~~~~~kvsVII-P~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~FnR~~~lN~G~~~A~~~~~~D~lif 134 (220)
.++.|+...++-|+| |+-++-...+.|.....+.|....+.+++..-... ..|++.+-..- -.++|=++.
T Consensus 172 ~~~~~~r~~~lLV~iNP~gGkGka~~~F~~~v~Pll~~A~i~~evv~T~~~-------~HArei~rt~d--l~kyDgIv~ 242 (579)
T KOG1116|consen 172 SVDSLKRPRRLLVFINPFGGKGKAKKLFKNHVEPLLSEAGISFEVVLTTRP-------NHAREIVRTLD--LGKYDGIVC 242 (579)
T ss_pred cccccCCCccEEEEECCCCCCccHHHHHHhhhhhhhhhcCceEEEEEecCc-------cHHHHHHHhhh--ccccceEEE
Confidence 346677777877777 99999999999999999999888888888766522 34555554332 468899999
Q ss_pred eccccccCCC
Q psy18177 135 HDVDLIPINP 144 (220)
Q Consensus 135 ~DvDlip~~~ 144 (220)
.-+|=|++.-
T Consensus 243 vsGDGl~hEV 252 (579)
T KOG1116|consen 243 VSGDGLLHEV 252 (579)
T ss_pred ecCCcCHHHh
Confidence 9999987743
No 114
>cd01133 F1-ATPase_beta F1 ATP synthase beta subunit, nucleotide-binding domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The beta subunit of ATP synthase is catalytic.
Probab=21.55 E-value=3.4e+02 Score=24.35 Aligned_cols=69 Identities=16% Similarity=0.104 Sum_probs=51.6
Q ss_pred ceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcccccchhhhhhHHHh--hhcC-CCceEEEec
Q psy18177 65 ELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYI--QENT-HCDFIAMHD 136 (220)
Q Consensus 65 kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~FnR~~~lN~G~~~A--~~~~-~~D~lif~D 136 (220)
.+.|++-.=.|.++...|++.+. ....++..++|+.+.++.+-.|-++-..|...| .... ..|++++.|
T Consensus 99 ~~~V~~~iGer~~Ev~e~~~~~~---~~~~~~~tvvv~~t~d~~~~~r~~~~~~a~~~AEyfr~~~g~~Vl~~~D 170 (274)
T cd01133 99 GYSVFAGVGERTREGNDLYHEMK---ESGVLSKTALVYGQMNEPPGARARVALTGLTMAEYFRDEEGQDVLLFID 170 (274)
T ss_pred CEEEEEEeccCcHHHHHHHHHHH---hcCCcceeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEe
Confidence 45677666689998888887753 444577889999998888888888888887766 2123 668898888
No 115
>PLN02189 cellulose synthase
Probab=20.83 E-value=1.3e+02 Score=32.10 Aligned_cols=48 Identities=21% Similarity=0.152 Sum_probs=35.6
Q ss_pred cceeEEEEEeccCcccc---cchhhhhhHHHhhhcCCCceEEEeccccccCC
Q psy18177 95 IVYNVYVVNQVDSYRFN---RGSLINVGFLYIQENTHCDFIAMHDVDLIPIN 143 (220)
Q Consensus 95 ~~~~I~Vveq~~~~~Fn---R~~~lN~G~~~A~~~~~~D~lif~DvDlip~~ 143 (220)
++.-|||.-+. ..+++ ||=++|+.++.+-...++++++-.|+|+.+.+
T Consensus 497 lP~LVYVSREK-rPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nn 547 (1040)
T PLN02189 497 LPRLVYVSREK-RPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINN 547 (1040)
T ss_pred cceeEEEeccC-CCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCc
Confidence 55567777643 33444 88999999976533468999999999999876
No 116
>PLN02195 cellulose synthase A
Probab=20.35 E-value=1.4e+02 Score=31.52 Aligned_cols=49 Identities=18% Similarity=0.100 Sum_probs=32.8
Q ss_pred cceeEEEEEeccCcccc---cchhhhhhHHHhhhcCCCceEEEeccccccCCC
Q psy18177 95 IVYNVYVVNQVDSYRFN---RGSLINVGFLYIQENTHCDFIAMHDVDLIPINP 144 (220)
Q Consensus 95 ~~~~I~Vveq~~~~~Fn---R~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~ 144 (220)
++.-|||..+. ..+++ ||=++|++++.+-...++++++..|+|+.+.+.
T Consensus 418 lP~LVYVSREK-rPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s 469 (977)
T PLN02195 418 LPRLVYVSREK-RPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNS 469 (977)
T ss_pred CceeEEEeccC-CCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcH
Confidence 34445555432 22333 777899999865334689999999999987764
No 117
>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2.4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane
Probab=20.14 E-value=2.5e+02 Score=26.32 Aligned_cols=27 Identities=7% Similarity=0.274 Sum_probs=23.5
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHH
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVF 89 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~ 89 (220)
...+-|+|-+.+|++-|+.++.+|++.
T Consensus 30 ~~~~vivvqVH~r~~yl~~li~sL~~~ 56 (356)
T PF05060_consen 30 NDSIVIVVQVHNRPEYLKLLIDSLSQA 56 (356)
T ss_pred CCCEEEEEEECCcHHHHHHHHHHHHHh
Confidence 467889999999999999999998743
Done!