Query psy18177
Match_columns 220
No_of_seqs 148 out of 648
Neff 6.2
Searched_HMMs 29240
Date Sat Aug 17 00:39:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18177.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18177hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lw6_A FI08434P, beta-4-galact 100.0 1.5E-58 5.2E-63 407.0 16.2 186 33-220 17-206 (287)
2 2fy7_A Beta-1,4-galactosyltran 100.0 4E-37 1.4E-41 272.1 14.1 183 36-219 34-221 (287)
3 1xhb_A Polypeptide N-acetylgal 99.6 1.6E-15 5.5E-20 139.6 14.0 148 62-217 27-249 (472)
4 2ffu_A Ppgalnact-2, polypeptid 99.6 2.8E-15 9.7E-20 139.4 13.3 151 62-217 64-281 (501)
5 2d7i_A Polypeptide N-acetylgal 99.6 3.6E-15 1.2E-19 141.7 14.1 150 63-217 111-329 (570)
6 2z86_A Chondroitin synthase; G 99.6 1.7E-15 5.8E-20 143.8 11.1 147 64-218 93-322 (625)
7 2nxv_A ATP synthase subunits r 99.6 1.9E-14 6.5E-19 122.7 12.0 147 63-218 15-196 (249)
8 3bcv_A Putative glycosyltransf 99.5 9.3E-14 3.2E-18 115.0 10.7 147 63-218 4-217 (240)
9 4fix_A UDP-galactofuranosyl tr 99.4 5.8E-13 2E-17 129.2 10.4 154 58-218 174-409 (657)
10 1qg8_A Protein (spore coat pol 99.4 6.8E-13 2.3E-17 111.0 7.8 142 64-216 1-204 (255)
11 2z86_A Chondroitin synthase; G 99.2 3E-11 1E-15 114.6 10.9 143 63-216 374-562 (625)
12 4hg6_A Cellulose synthase subu 99.1 3.9E-10 1.3E-14 111.3 13.8 145 63-218 139-360 (802)
13 3l7i_A Teichoic acid biosynthe 99.0 2.6E-11 8.7E-16 117.9 0.0 145 64-218 2-197 (729)
14 3f1y_A Mannosyl-3-phosphoglyce 98.9 8.7E-10 3E-14 100.7 5.3 143 63-214 93-296 (387)
15 3ckj_A Putative uncharacterize 98.9 4.7E-09 1.6E-13 92.6 8.6 141 61-214 45-251 (329)
16 1fo8_A Alpha-1,3-mannosyl-glyc 97.9 2.2E-05 7.5E-10 70.7 7.9 81 64-147 2-118 (343)
17 2bo4_A Mannosylglycerate synth 96.9 0.0012 4.1E-08 60.4 6.5 144 68-216 4-207 (397)
18 2zu9_A Mannosyl-3-phosphoglyce 96.2 0.0079 2.7E-07 55.1 6.7 34 173-210 248-281 (394)
19 2wvl_A Mannosyl-3-phosphoglyce 94.5 0.044 1.5E-06 49.9 5.5 37 63-105 52-88 (391)
20 2c0n_A A197; thermophil protei 92.6 0.15 5.2E-06 42.5 5.1 138 64-215 1-165 (203)
21 1omz_A Alpha-1,4-N-acetylhexos 36.8 63 0.0022 28.0 6.0 82 58-144 22-122 (293)
22 4b3f_X DNA-binding protein smu 31.7 22 0.00076 33.5 2.5 77 63-143 530-618 (646)
23 2gk6_A Regulator of nonsense t 24.1 51 0.0017 31.0 3.4 77 63-143 497-592 (624)
24 2gak_A Beta-1,6-N-acetylglucos 23.7 2.3E+02 0.0077 25.1 7.5 25 62-86 82-106 (391)
25 2zxe_G FXYD10, phospholemman-l 21.5 58 0.002 22.6 2.4 34 13-51 16-49 (74)
No 1
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=100.00 E-value=1.5e-58 Score=407.02 Aligned_cols=186 Identities=48% Similarity=0.955 Sum_probs=154.2
Q ss_pred HHHHhccccccceeecCCCCCC---CCCCCcCCCcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcc
Q psy18177 33 TLLIILLINVQGCDCNSVGGSL---LSQSTLHDQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYR 109 (220)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~ 109 (220)
.+.+..|+++++++.++|.+.. ++|++|++.++||||||||+|++||+.||++|+++|++|+++|.|||+||.++.+
T Consensus 17 ~~~~~~~~~l~~v~~~~~~v~~gG~~~P~~c~~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l~y~I~VieQ~~~~~ 96 (287)
T 3lw6_A 17 LIEFNIPVDLKLVEQQNPKVKLGGRYTPMDGASVHKMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVLNQVDRFR 96 (287)
T ss_dssp ------------------------------CCCCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSSSC
T ss_pred EEEcCCCCCHHHHHHhCCCcccCCEECCCccCCcceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCCceEEEEEecCCCCc
Confidence 3456778999999999996554 4999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhhHHHhhhcCCCceEEEeccccccCCCCccccCCC-CceeeeecCCCCCCCCcccccccccccchhhhhhcC
Q psy18177 110 FNRGSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNYSYPG-DAIMHIAAPDLHPKYHYKTFLGGILMMKNEHFQTVN 188 (220)
Q Consensus 110 FnR~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y~~~~-~~p~hls~~~~~~~~~~~~~~GG~~~i~kedf~kVn 188 (220)
||||+++|+|+.+| ...+||+||||||++|+++.+.|.|++ .+|+|+|.++++++++|..++||++++++++|.+||
T Consensus 97 FNRa~LlNvGf~ea--~~~~d~~ifHDVDLlP~dd~n~Y~c~~~~~P~Hls~~~~~~~~~Y~~~~GGv~a~~re~f~kVN 174 (287)
T 3lw6_A 97 FNRASLINVGFQFA--SDVYDYIAMHDVDLLPLNDNLLYEYPSSLGPLHIAGPKLHPKYHYDNFVGGILLVRREHFKQMN 174 (287)
T ss_dssp CCHHHHHHHHHHHS--CTTCCEEEEECTTEEECCTTSCCCCCCTTCCEESSCTTTCSSCCCTTCCCSEEEEEHHHHHHTT
T ss_pred cchhheecccHHHH--hccCCEEEEecccccccCCCccccCCCCCCceEEeeccccCCCCcCCccccEEeccHHHHHHcC
Confidence 99999999999999 457899999999999999999999986 479999998899999999999999999999999999
Q ss_pred CCCCCCccCCCCcHHHHHHHHHCCCeEeCCCC
Q psy18177 189 GLSNKYWGWGLEDDELYVRIKEARIRIERPEN 220 (220)
Q Consensus 189 Gfde~f~GWGgED~Dl~~Rl~~~G~~i~R~~g 220 (220)
||||.|||||+||+||+.|+..+|+++.||+|
T Consensus 175 GFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~ 206 (287)
T 3lw6_A 175 GMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQN 206 (287)
T ss_dssp SCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSS
T ss_pred CCCCcCcCCCccchHHHHHHHHcCCcEEcCCC
Confidence 99999999999999999999999999999975
No 2
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=100.00 E-value=4e-37 Score=272.11 Aligned_cols=183 Identities=30% Similarity=0.585 Sum_probs=160.0
Q ss_pred HhccccccceeecCCCCCC---CCCCCcCCCcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCccccc
Q psy18177 36 IILLINVQGCDCNSVGGSL---LSQSTLHDQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNR 112 (220)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~FnR 112 (220)
+..++++++++.+++.... ++|++|++.++||||||+|||.++|..+|+++++++++|..+++|+|+++.++.+|+|
T Consensus 34 ~~~~~~~~~~~~~~~~~~~gg~~~p~~c~~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~~EIiVVdds~d~~f~~ 113 (287)
T 2fy7_A 34 FNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNR 113 (287)
T ss_dssp CCSCCCHHHHHHHCTTCBTTTEECCSSSBCSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSSSCCCH
T ss_pred ccCCCCHHHHHhhCCCcccCCcCcCCCCCcCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEeCCCCccch
Confidence 3456778888887775443 4999999999999999999999999999999998888888899999999988889999
Q ss_pred chhhhhhHHHhhhcCCCceEEEeccccccCCCCccccCCCCceeeeecC--CCCCCCCcccccccccccchhhhhhcCCC
Q psy18177 113 GSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNYSYPGDAIMHIAAP--DLHPKYHYKTFLGGILMMKNEHFQTVNGL 190 (220)
Q Consensus 113 ~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y~~~~~~p~hls~~--~~~~~~~~~~~~GG~~~i~kedf~kVnGf 190 (220)
++++|.|+.+|++.+++||++|+|+|+++.++...|.|.. .|.|++.. .+.++.+|..++||+++++|++|.+||||
T Consensus 114 a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~f~~vgGF 192 (287)
T 2fy7_A 114 AKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFS-QPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGF 192 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSCCSCCS-SCEECCCEEGGGTTSCSSTTCCCSEEEEEHHHHHHTTSC
T ss_pred hhhhhhHHHHHHHhCCCCEEEEECCCcccCCCcceEecCC-CCceEEEeecccccCCCcCceeeeEEEEEHHHHHHcCCC
Confidence 9999999977766679999999999999999987777754 67776532 23445577788999999999999999999
Q ss_pred CCCCccCCCCcHHHHHHHHHCCCeEeCCC
Q psy18177 191 SNKYWGWGLEDDELYVRIKEARIRIERPE 219 (220)
Q Consensus 191 de~f~GWGgED~Dl~~Rl~~~G~~i~R~~ 219 (220)
||.|+|||+||.||..|+..+|+++.|++
T Consensus 193 de~~~g~g~ED~Dl~~Rl~~~G~~i~~~~ 221 (287)
T 2fy7_A 193 PNNYWGWGGEDDDIFNRLVFRGMSISRPN 221 (287)
T ss_dssp CSCCSSCSCHHHHHHHHHHHTTCCCBCCC
T ss_pred CccccccccchHHHHHHHHHcCCeEEecC
Confidence 99999999999999999999999999874
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.64 E-value=1.6e-15 Score=139.62 Aligned_cols=148 Identities=16% Similarity=0.150 Sum_probs=105.8
Q ss_pred CCcceEEEEEecCCH-HHHHHHHHHHHHHhhhcC---cceeEEEEEeccCc-------------------------cccc
Q psy18177 62 DQHELCLIIPFRDRF-DELLIFLMHMKVFLERQN---IVYNVYVVNQVDSY-------------------------RFNR 112 (220)
Q Consensus 62 ~~~kvsVIIP~r~R~-~~L~~~L~~l~~~L~~q~---~~~~I~Vveq~~~~-------------------------~FnR 112 (220)
..++||||||+||+. +.|..+|.++. .|. ..++|+||++.+.. ....
T Consensus 27 ~~p~vSVIIp~yN~~~~~l~~~l~Sl~----~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G~ 102 (472)
T 1xhb_A 27 NLPTTSVVIVFHNEAWSTLLRTVHSVI----NRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGL 102 (472)
T ss_dssp CCCCEEEEEEESSCCHHHHHHHHHHHH----HSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCH
T ss_pred CCCCeEEEEEeCCCCHHHHHHHHHHHH----hcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCCh
Confidence 356899999999999 99999999864 333 34799999864221 2335
Q ss_pred chhhhhhHHHhhhcCCCceEEEeccccccCCCCccc------cCCCC--ceee--eecC-------------CC----CC
Q psy18177 113 GSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNY------SYPGD--AIMH--IAAP-------------DL----HP 165 (220)
Q Consensus 113 ~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y------~~~~~--~p~h--ls~~-------------~~----~~ 165 (220)
+.++|.|++.| ++|+++|.|.|+++.++.+.- .-+.. .|.. +... .+ ..
T Consensus 103 ~~a~N~g~~~A----~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (472)
T 1xhb_A 103 IRARLKGAAVS----RGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNF 178 (472)
T ss_dssp HHHHHHHHHHC----CSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCE
T ss_pred HHHHHHHHHhc----cCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeecccee
Confidence 67889999988 899999999999988775210 00000 0100 0000 00 00
Q ss_pred -------------------CCCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeC
Q psy18177 166 -------------------KYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIER 217 (220)
Q Consensus 166 -------------------~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R 217 (220)
........||.+++.|+.|.++|||||.|..||+||.||..|+..+|.++..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~ 249 (472)
T 1xhb_A 179 RWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEI 249 (472)
T ss_dssp EEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEE
T ss_pred ecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEE
Confidence 0011235688999999999999999999999999999999999999998864
No 4
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.62 E-value=2.8e-15 Score=139.45 Aligned_cols=151 Identities=15% Similarity=0.132 Sum_probs=106.2
Q ss_pred CCcceEEEEEecCCHH-HHHHHHHHHHHHhhhcCcceeEEEEEeccC--------------------cccccchhhhhhH
Q psy18177 62 DQHELCLIIPFRDRFD-ELLIFLMHMKVFLERQNIVYNVYVVNQVDS--------------------YRFNRGSLINVGF 120 (220)
Q Consensus 62 ~~~kvsVIIP~r~R~~-~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~--------------------~~FnR~~~lN~G~ 120 (220)
..++||||||+||+.+ .|..+|.++.... .....++|+||++... ..+..+.++|.|+
T Consensus 64 ~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~-~~~~~~EIIvVDDgS~D~t~~~~~~~~~~v~vi~~~~n~G~~~A~N~G~ 142 (501)
T 2ffu_A 64 DLPATSVVITFHNEARSALLRTVVSVLKKS-PPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRREGLMRSRVRGA 142 (501)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHHHS-CGGGEEEEEEEECSCSCTHHHHGGGGBTTEEEEECSSCCHHHHHHHHHH
T ss_pred CCCCEEEEEEeCcCcHHHHHHHHHHHHhhC-chhhceeEEEEECCCCchHHHHHHhcCCCEEEEECCCCcCHHHHHHHHH
Confidence 4568999999999987 8999998864211 0123479999986421 2345678999999
Q ss_pred HHhhhcCCCceEEEeccccccCCCCccc-----cCCCC---ceee--eecC-------------CC--------------
Q psy18177 121 LYIQENTHCDFIAMHDVDLIPINPRLNY-----SYPGD---AIMH--IAAP-------------DL-------------- 163 (220)
Q Consensus 121 ~~A~~~~~~D~lif~DvDlip~~~~~~y-----~~~~~---~p~h--ls~~-------------~~-------------- 163 (220)
+.| ++|+++|.|.|+.+.++.+.- .-... .|.. +... .+
T Consensus 143 ~~A----~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (501)
T 2ffu_A 143 DAA----QAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPE 218 (501)
T ss_dssp HHC----CSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHH
T ss_pred Hhc----CCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHH
Confidence 988 899999999999988764210 00000 0110 0000 00
Q ss_pred -------CCCCC--cccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeC
Q psy18177 164 -------HPKYH--YKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIER 217 (220)
Q Consensus 164 -------~~~~~--~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R 217 (220)
.+..+ .....||.+++.|+.|.++|||||.|..||+||.||..|+...|.++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~ 281 (501)
T 2ffu_A 219 QRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEI 281 (501)
T ss_dssp HHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred HHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEE
Confidence 00001 1235689999999999999999999999999999999999999998864
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.62 E-value=3.6e-15 Score=141.73 Aligned_cols=150 Identities=17% Similarity=0.143 Sum_probs=105.5
Q ss_pred CcceEEEEEecCCH-HHHHHHHHHHHHHhhhcCcceeEEEEEeccC------------------------cccccchhhh
Q psy18177 63 QHELCLIIPFRDRF-DELLIFLMHMKVFLERQNIVYNVYVVNQVDS------------------------YRFNRGSLIN 117 (220)
Q Consensus 63 ~~kvsVIIP~r~R~-~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~------------------------~~FnR~~~lN 117 (220)
.++||||||+||+. +.|..+|.++.... .....++|+||++.+. .....+.++|
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt-~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~G~~~A~N 189 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRS-PPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKREGLIRTRM 189 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHS-CGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSCCCHHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcC-CccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCHHHHHH
Confidence 46899999999997 99999998864210 0123469999986321 2345678999
Q ss_pred hhHHHhhhcCCCceEEEeccccccCCCCccc------cCCCC--cee---------------------eeecC-------
Q psy18177 118 VGFLYIQENTHCDFIAMHDVDLIPINPRLNY------SYPGD--AIM---------------------HIAAP------- 161 (220)
Q Consensus 118 ~G~~~A~~~~~~D~lif~DvDlip~~~~~~y------~~~~~--~p~---------------------hls~~------- 161 (220)
.|++.| ++|+++|.|.|+++.++.+.- .-+.. .|. .+...
T Consensus 190 ~G~~~A----~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (570)
T 2d7i_A 190 LGASVA----TGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIP 265 (570)
T ss_dssp HHHHHC----CSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEEC
T ss_pred HHHHhc----CCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccc
Confidence 999988 899999999999987764210 00000 010 00000
Q ss_pred CC---C---CCCC--cccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeC
Q psy18177 162 DL---H---PKYH--YKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIER 217 (220)
Q Consensus 162 ~~---~---~~~~--~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R 217 (220)
.. . +..+ .....||.+++.|+.|.++|||||.|..||+||.||..|+..+|.++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~ 329 (570)
T 2d7i_A 266 IPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMED 329 (570)
T ss_dssp CCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred cchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEE
Confidence 00 0 0001 1235689999999999999999999999999999999999999999864
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.61 E-value=1.7e-15 Score=143.84 Aligned_cols=147 Identities=18% Similarity=0.286 Sum_probs=107.3
Q ss_pred cceEEEEEecCCHHHHHHHHHHHHHHhhhcC--cceeEEEEEeccC-----------------------cccccchhhhh
Q psy18177 64 HELCLIIPFRDRFDELLIFLMHMKVFLERQN--IVYNVYVVNQVDS-----------------------YRFNRGSLINV 118 (220)
Q Consensus 64 ~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~--~~~~I~Vveq~~~-----------------------~~FnR~~~lN~ 118 (220)
++||||||+||+.+.|..+|.++. .|. .+++|+|+++.+. .++.++.++|.
T Consensus 93 p~vsviIp~~n~~~~l~~~l~sl~----~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~ 168 (625)
T 2z86_A 93 DGLSIVIPTYNRAKILAITLACLC----NQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNL 168 (625)
T ss_dssp CCEEEEEEESSCHHHHHHHHHHHH----TCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHH
T ss_pred CcEEEEEecCCcHHHHHHHHHHHH----hhccCCCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHH
Confidence 589999999999999999998863 443 3789999986421 13336789999
Q ss_pred hHHHhhhcCCCceEEEeccccccCCCCccc------cCCCC---ceeeee-cCC------------------------C-
Q psy18177 119 GFLYIQENTHCDFIAMHDVDLIPINPRLNY------SYPGD---AIMHIA-APD------------------------L- 163 (220)
Q Consensus 119 G~~~A~~~~~~D~lif~DvDlip~~~~~~y------~~~~~---~p~hls-~~~------------------------~- 163 (220)
|++.| ++|+++|.|.|.++.++.... ..+.. ++.... ... +
T Consensus 169 g~~~a----~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (625)
T 2z86_A 169 GLRAA----KYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVA 244 (625)
T ss_dssp HHHHC----CSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC--------
T ss_pred HHHhC----CcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchh
Confidence 99987 899999999999998774210 00100 111000 000 0
Q ss_pred ---------C--------------CCCCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 164 ---------H--------------PKYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 164 ---------~--------------~~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
. ...++....|+.+++.|+.|.++||||+.|.+||+||.||..|+..+|.++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~ 322 (625)
T 2z86_A 245 GKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSV 322 (625)
T ss_dssp -------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEEC
T ss_pred hhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEc
Confidence 0 001122367899999999999999999999999999999999999999988654
No 7
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.56 E-value=1.9e-14 Score=122.75 Aligned_cols=147 Identities=9% Similarity=0.004 Sum_probs=103.9
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcccccchhhhhhHHHhhhcCCCceEEEeccccccC
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYIQENTHCDFIAMHDVDLIPI 142 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~FnR~~~lN~G~~~A~~~~~~D~lif~DvDlip~ 142 (220)
.+++||| |+||+.+.|..+|.++...+..|.. +||+||+.........+.++|.|++.| ++||++|.|.|.++.
T Consensus 15 ~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d~~g~a~a~N~Gi~~A----~g~yl~fln~D~~~~ 88 (249)
T 2nxv_A 15 TLMFSVC-SLVRDQAKYDRLLESFERFGFTPDK-AEFLAADNREGNQFHGFSWHKQMLPRC----KGRYVIFCHEDVELV 88 (249)
T ss_dssp CCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTT-EEEEEEECTTSCSCCTTTHHHHHGGGC----CSSEEEEEETTEECS
T ss_pred cceEEEE-EeeCCHHHHHHHHHHHHHhccCCCc-EEEEEEECCCCCcccHHHHHHHHHHhc----CCCEEEEECCCcccC
Confidence 3578975 6699999999999988765555654 999999876554356789999999988 899999999999987
Q ss_pred CCCcc--c---cC-----CCC---ceeeeecCCCCC---------CCCc-------------ccccccccccchhhhhhc
Q psy18177 143 NPRLN--Y---SY-----PGD---AIMHIAAPDLHP---------KYHY-------------KTFLGGILMMKNEHFQTV 187 (220)
Q Consensus 143 ~~~~~--y---~~-----~~~---~p~hls~~~~~~---------~~~~-------------~~~~GG~~~i~kedf~kV 187 (220)
++... . .- ++. ++.......... ..++ ....|+.++++|+. +
T Consensus 89 ~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~rr~~---~ 165 (249)
T 2nxv_A 89 DRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSVTAQALHISDVFGNDRRRGNVPCRVESLDECFLLMRRLK---P 165 (249)
T ss_dssp SCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTSCCCEEEEEETTEEEEEESCSSEEEEEECTTEEEEETTB---C
T ss_pred ccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCceeeecccccCCccccccccCCCceEcCeeeeEeeEEEHhh---h
Confidence 76421 1 10 211 111110000000 0000 11246677787877 8
Q ss_pred CCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 188 NGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 188 nGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
|||||.+.||..||.|+..|+..+|.++...
T Consensus 166 ~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~ 196 (249)
T 2nxv_A 166 VLNSYDMQGFHYYGADLCLQAEFLGGRAYAI 196 (249)
T ss_dssp CCCCSSCCSSSSHHHHHHHHHHHTTCEEEEC
T ss_pred CCCCCCCCCcceehhHHHHHHHHcCCeEEEe
Confidence 8999999999999999999999999988654
No 8
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.50 E-value=9.3e-14 Score=115.02 Aligned_cols=147 Identities=10% Similarity=0.048 Sum_probs=99.8
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC----------------------cccccchhhhhh
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS----------------------YRFNRGSLINVG 119 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~----------------------~~FnR~~~lN~G 119 (220)
.++||||||+||+.+.|..+|.++. +|. .+++|+|+++... +....+.++|.|
T Consensus 4 ~p~vsViIp~yn~~~~l~~~l~Sl~----~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~~~n~G~~~a~N~g 79 (240)
T 3bcv_A 4 IPKVSVIVPIYNVEKYLDQCVQALL----AQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIHKKNAGLGMACNSG 79 (240)
T ss_dssp CCSEEEEEEESSCTTTHHHHHHHHH----TCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEECCCCCHHHHHHHH
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHH----hCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEECCCCChHHHHHHH
Confidence 4579999999999999999999863 443 4689999886421 123456889999
Q ss_pred HHHhhhcCCCceEEEeccccccCCCCccc-----cC-CCC----ceeeeec-C----CCC---C---CCC----------
Q psy18177 120 FLYIQENTHCDFIAMHDVDLIPINPRLNY-----SY-PGD----AIMHIAA-P----DLH---P---KYH---------- 168 (220)
Q Consensus 120 ~~~A~~~~~~D~lif~DvDlip~~~~~~y-----~~-~~~----~p~hls~-~----~~~---~---~~~---------- 168 (220)
++.| ++||++|.|.|.++.++.... .- ... ....+.. . ... . .+.
T Consensus 80 ~~~a----~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (240)
T 3bcv_A 80 LDVA----TGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKD 155 (240)
T ss_dssp HHHC----CSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGG
T ss_pred HHHc----CCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHH
Confidence 9988 899999999999988774210 00 000 0000000 0 000 0 000
Q ss_pred -cc-----------cccccccccchhhhhhcC-CCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 169 -YK-----------TFLGGILMMKNEHFQTVN-GLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 169 -~~-----------~~~GG~~~i~kedf~kVn-Gfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
.. ...|+.+++.|+.|.++| ||||.+.- ++||.||..|+..+|.++...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~-~~eD~~~~~r~~~~g~~i~~~ 217 (240)
T 3bcv_A 156 LIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERIL-PSEDLIFNVDVLANSNIVCVL 217 (240)
T ss_dssp GTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTC-TTHHHHHHHHHHTTCSCEEEC
T ss_pred HhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCc-cCCCHHHHHHHHHhCCEEEEE
Confidence 00 023677899999999999 99998653 459999999999999988644
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.41 E-value=5.8e-13 Score=129.24 Aligned_cols=154 Identities=13% Similarity=0.039 Sum_probs=105.0
Q ss_pred CCcCCCcceEEEEEecCCHHHHHHHHHHHHHHhhhcC----cceeEEEEEeccCc-----------------------cc
Q psy18177 58 STLHDQHELCLIIPFRDRFDELLIFLMHMKVFLERQN----IVYNVYVVNQVDSY-----------------------RF 110 (220)
Q Consensus 58 ~~~~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~----~~~~I~Vveq~~~~-----------------------~F 110 (220)
..-....+||||||+|||.+.|..+|+++. +|. ..++|+||++.... +
T Consensus 174 ~~~~~~pkVSVVIptYN~~~~L~~~L~SL~----~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~~- 248 (657)
T 4fix_A 174 SPAPGTANIAVGIPTFNRPADCVNALRELT----ADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQP- 248 (657)
T ss_dssp SCCCSCCCEEEECCBSSCHHHHHHHHHHHT----TSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEECC-
T ss_pred CCCCCCCeEEEEEEecCCHHHHHHHHHHHH----cCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCCEEEEECC-
Confidence 333456799999999999999999999863 443 35689999875321 2
Q ss_pred cc--chhhhhhHHHhhhcCCCceEEEeccccccCCCCccc------cCCCC---ceeeeecC---------------C--
Q psy18177 111 NR--GSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNY------SYPGD---AIMHIAAP---------------D-- 162 (220)
Q Consensus 111 nR--~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y------~~~~~---~p~hls~~---------------~-- 162 (220)
|+ +.++|.|++.|....++||++|.|.|.++.++.+.- ..+.. ++..+... .
T Consensus 249 N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~ 328 (657)
T 4fix_A 249 NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFM 328 (657)
T ss_dssp CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccc
Confidence 33 467899999986544789999999999988764210 00000 11111000 0
Q ss_pred ------------CC---C------------CCCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeE
Q psy18177 163 ------------LH---P------------KYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRI 215 (220)
Q Consensus 163 ------------~~---~------------~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i 215 (220)
+. . ........|+.+++.|+.|.++||||+.|..| ||.|+..|+..+|+++
T Consensus 329 ~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~--ED~Dl~lR~~~~G~ki 406 (657)
T 4fix_A 329 WTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKW--DDADYGLRAAEHGYPT 406 (657)
T ss_dssp EEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSS--HHHHHHHHHHHTTCCE
T ss_pred ccccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChhHhccC--cHHHHHHHHHHcCCeE
Confidence 00 0 00111234677899999999999999766654 9999999999999987
Q ss_pred eCC
Q psy18177 216 ERP 218 (220)
Q Consensus 216 ~R~ 218 (220)
...
T Consensus 407 ~~~ 409 (657)
T 4fix_A 407 VTL 409 (657)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 10
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.38 E-value=6.8e-13 Score=110.97 Aligned_cols=142 Identities=13% Similarity=0.161 Sum_probs=97.3
Q ss_pred cceEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC------------------------------ccccc
Q psy18177 64 HELCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS------------------------------YRFNR 112 (220)
Q Consensus 64 ~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~------------------------------~~FnR 112 (220)
++||||||+||+.+.|..+|.++. +|. .+++|+|+++... .....
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~----~q~~~~~eiivvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G~ 76 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSIL----SQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKTRY 76 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHH----TCSCCCEEEEEEECSCCHHHHHHHGGGGGSTTEEEEECCCCSHHHHHSSCHH
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHH----hccCCceEEEEEECCCCchHHHHHHHHhhcCCEEEEecccccccccccccCH
Confidence 479999999999999999999863 454 4689999886321 12334
Q ss_pred chhhhhhHHHhhhcCCCceEEEeccccccCCCCccc------cCCCCc---ee--ee--ecC----------CCCCC-CC
Q psy18177 113 GSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNY------SYPGDA---IM--HI--AAP----------DLHPK-YH 168 (220)
Q Consensus 113 ~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y------~~~~~~---p~--hl--s~~----------~~~~~-~~ 168 (220)
+.++|.|++.| ++||++|+|.|.++.++.... ..++.. +. .+ ... ..... ..
T Consensus 77 ~~a~N~gi~~a----~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
T 1qg8_A 77 AALINQAIEMA----EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVTWNA 152 (255)
T ss_dssp HHHHHHHHHHC----CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCCSCBSCC
T ss_pred HHHHHHHHHHc----CCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCchHHHHHhh
Confidence 67889999987 999999999999988774211 111110 00 01 000 00000 11
Q ss_pred cccccccccccchhhhhhcC-CC------CCCCccCCCCcHHHHHHHHHCCCeEe
Q psy18177 169 YKTFLGGILMMKNEHFQTVN-GL------SNKYWGWGLEDDELYVRIKEARIRIE 216 (220)
Q Consensus 169 ~~~~~GG~~~i~kedf~kVn-Gf------de~f~GWGgED~Dl~~Rl~~~G~~i~ 216 (220)
.....|+.+++.|+.|.++| || ++.+ +++||.||..|+...| ++.
T Consensus 153 ~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~--~~~eD~~~~~r~~~~g-~~~ 204 (255)
T 1qg8_A 153 PCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAF--YRIGDARFFWRVNHFY-PFY 204 (255)
T ss_dssp TTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGG--STTHHHHHHHHHTTTC-CBE
T ss_pred cCCCccceEEEEHHHHHhhcccccccccCCccc--chHHHHHHHHHHHHhC-CEE
Confidence 23356788899999999999 89 5655 5789999999999887 443
No 11
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.23 E-value=3e-11 Score=114.56 Aligned_cols=143 Identities=13% Similarity=0.115 Sum_probs=99.7
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC----------------------cccccchhhhhh
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS----------------------YRFNRGSLINVG 119 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~----------------------~~FnR~~~lN~G 119 (220)
.++||||||+||+.+.|..+|.++. .|. .+++|+|+++... .....+.++|.|
T Consensus 374 ~~~vsiii~~yn~~~~l~~~l~s~~----~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~~~n~G~~~a~n~g 449 (625)
T 2z86_A 374 VPLVSIYIPAYNCSKYIVRCVESAL----NQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTA 449 (625)
T ss_dssp SCSEEEEEEESSCTTTHHHHHHHHH----SSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEEECCCCHHHHHHHH
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHH----hCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEeCCCCCHHHHHHHH
Confidence 4689999999999999999999863 443 4689999986421 123346788999
Q ss_pred HHHhhhcCCCceEEEeccccccCCCCcc-----c-cCCCCc---e--eeeecC------CCC-CC-----CCcccccccc
Q psy18177 120 FLYIQENTHCDFIAMHDVDLIPINPRLN-----Y-SYPGDA---I--MHIAAP------DLH-PK-----YHYKTFLGGI 176 (220)
Q Consensus 120 ~~~A~~~~~~D~lif~DvDlip~~~~~~-----y-~~~~~~---p--~hls~~------~~~-~~-----~~~~~~~GG~ 176 (220)
++.| ++||++|.|.|.++.++... + ..+... + ..+... ... +. .......|+.
T Consensus 450 ~~~a----~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (625)
T 2z86_A 450 VRLC----RGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHF 525 (625)
T ss_dssp HHHC----CSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCCCSSCCHHHHTTSCCCCSC
T ss_pred HHhc----CCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcccccCCHHHHhhcccCCce
Confidence 9987 89999999999998877421 1 111110 1 011100 000 00 0112345677
Q ss_pred cccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEe
Q psy18177 177 LMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIE 216 (220)
Q Consensus 177 ~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~ 216 (220)
+++.|+.|.++||||+.|. ++||.||..|+...| ++.
T Consensus 526 ~~~~r~~~~~~ggfd~~~~--~~eD~dl~~r~~~~g-~~~ 562 (625)
T 2z86_A 526 RMFTARAWNLTEGFNESIS--NAVDYDMYLKLSEVG-PFK 562 (625)
T ss_dssp EEEEHHHHTTTTCCCSSCS--SCHHHHHHHHHTTTS-CEE
T ss_pred EEEEHHHHHHhCCCCCccC--ChHHHHHHHHHHHhC-CEE
Confidence 8899999999999999987 459999999999998 654
No 12
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.13 E-value=3.9e-10 Score=111.35 Aligned_cols=145 Identities=12% Similarity=0.157 Sum_probs=99.8
Q ss_pred CcceEEEEEecCCHHHH-HHHHHHHHHHhhhcCcc---eeEEEEEeccC-------------------------------
Q psy18177 63 QHELCLIIPFRDRFDEL-LIFLMHMKVFLERQNIV---YNVYVVNQVDS------------------------------- 107 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L-~~~L~~l~~~L~~q~~~---~~I~Vveq~~~------------------------------- 107 (220)
..+||||||+||..+.+ +.+|+++. +|..+ ++|+|+++.+.
T Consensus 139 ~P~VSViIPtyNe~~~lL~~~L~Sl~----~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v 214 (802)
T 4hg6_A 139 LPTVDILVPSYNEPADMLSVTLAAAK----NMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGV 214 (802)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHH----TSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcEEEEEEECCCCHHHHHHHHHHHH----hccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCc
Confidence 45899999999998766 88998863 45433 78999986310
Q ss_pred -------cccccchhhhhhHHHhhhcCCCceEEEeccccccCCCCccc------cCCCC----ceeeeecC--------C
Q psy18177 108 -------YRFNRGSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNY------SYPGD----AIMHIAAP--------D 162 (220)
Q Consensus 108 -------~~FnR~~~lN~G~~~A~~~~~~D~lif~DvDlip~~~~~~y------~~~~~----~p~hls~~--------~ 162 (220)
..-.|+.++|.|++.| ++||+++.|.|.++.++.... .-++. ++..+... .
T Consensus 215 ~~i~~~~~~~GKa~alN~gl~~a----~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~ 290 (802)
T 4hg6_A 215 VYSTRERNEHAKAGNMSAALERL----KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLAL 290 (802)
T ss_dssp EEEECSSCCSHHHHHHHHHHHHC----CCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTC
T ss_pred EEEEecCCCCcchHHHHHHHHhc----CCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhH
Confidence 0123556789999987 999999999999998875211 11111 01111000 0
Q ss_pred CC-----C------------CCCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 163 LH-----P------------KYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 163 ~~-----~------------~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
+. . ......+.|+..++.|+.++++|||++... +||.|+..|+...|.++.-.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~~~~~---~ED~~l~~rl~~~G~ri~~~ 360 (802)
T 4hg6_A 291 GDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFAGETI---TEDAETALEIHSRGWKSLYI 360 (802)
T ss_dssp CTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCCCSSS---SHHHHHHHHHHTTTCCEEEC
T ss_pred HhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHcCCcCCCCc---chHHHHHHHHHHcCCeEEEe
Confidence 00 0 001123568889999999999999999776 39999999999999987543
No 13
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.03 E-value=2.6e-11 Score=117.93 Aligned_cols=145 Identities=9% Similarity=0.094 Sum_probs=0.0
Q ss_pred cceEEEEEecCCHHHHHHHHHHHHHHhhhcC-cceeEEEEEeccC------------------------cccccchhhhh
Q psy18177 64 HELCLIIPFRDRFDELLIFLMHMKVFLERQN-IVYNVYVVNQVDS------------------------YRFNRGSLINV 118 (220)
Q Consensus 64 ~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~-~~~~I~Vveq~~~------------------------~~FnR~~~lN~ 118 (220)
++||||||+||+.+.|..+|.++. .|. .++||+|+++.+. .....+.++|.
T Consensus 2 p~vSVIIp~yN~~~~L~~~L~Sll----~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~ 77 (729)
T 3l7i_A 2 NKLTIIVTYYNAEEYITGCLESIK----QQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNI 77 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCCCHHHHHHHHHHHH----hCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHH
Confidence 579999999999999999999863 343 4688888875311 12335688999
Q ss_pred hHHHhhhcCCCceEEEeccccccCCCCcccc--CCCCc-----e-eeeec--------CC-----CC----CCCCccccc
Q psy18177 119 GFLYIQENTHCDFIAMHDVDLIPINPRLNYS--YPGDA-----I-MHIAA--------PD-----LH----PKYHYKTFL 173 (220)
Q Consensus 119 G~~~A~~~~~~D~lif~DvDlip~~~~~~y~--~~~~~-----p-~hls~--------~~-----~~----~~~~~~~~~ 173 (220)
|++.| ++|+++|.|.|.++.++..... ..... . ..+.. .. .. .........
T Consensus 78 gi~~A----~gdyI~flD~Dd~~~p~~l~~l~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (729)
T 3l7i_A 78 ALEEV----ETPYFMFLDADDELASYAITFYLEKFNNTDGLIAPIHSFTTQRPQFVDLDRVRVEYFNAKENINSFLRKQS 153 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhc----cCCEEEEECCCCCCChhHHHHHHHHhcCCCEEEEeeEEeecCCCccccccceeeeeecchhhHHHHhhccc
Confidence 99988 8999999999999887753111 00000 0 00000 00 00 000112335
Q ss_pred ccccccchhhhhhcC-CCCCCCccCCCCcHHHHHHHHHCCCeEeCC
Q psy18177 174 GGILMMKNEHFQTVN-GLSNKYWGWGLEDDELYVRIKEARIRIERP 218 (220)
Q Consensus 174 GG~~~i~kedf~kVn-Gfde~f~GWGgED~Dl~~Rl~~~G~~i~R~ 218 (220)
++..++.|+.+.++| ||||.+. .+||.||..|+..+|.++...
T Consensus 154 ~~~~~~rr~~l~~~gl~fde~~~--~~ED~d~~~rl~~~g~~i~~~ 197 (729)
T 3l7i_A 154 ACNIIFRTAIVRAHHIRFNENLN--TYVDWSFVLEYMKYVNKFVRI 197 (729)
T ss_dssp ----------------------------------------------
T ss_pred hhheeeeHHHHHHcCCCcCCCCC--cccCHHHHHHHHHhcCCEEEe
Confidence 678899999999999 9999984 379999999999999877543
No 14
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=98.91 E-value=8.7e-10 Score=100.69 Aligned_cols=143 Identities=15% Similarity=0.177 Sum_probs=96.4
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccC-------------------------cccccchhhh
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDS-------------------------YRFNRGSLIN 117 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~-------------------------~~FnR~~~lN 117 (220)
.++||||||+||..+.|..+|.++...+++...+++|+|+++.+. ....++.++|
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A~n 172 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDAMW 172 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHHHH
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHHHH
Confidence 468999999999999999999998765554446799999986421 1334667888
Q ss_pred hhHHHhhhcCCCceEEEeccccc-cCCCCcc-----c-cCCCC----cee--eeec-----CCCCC--------------
Q psy18177 118 VGFLYIQENTHCDFIAMHDVDLI-PINPRLN-----Y-SYPGD----AIM--HIAA-----PDLHP-------------- 165 (220)
Q Consensus 118 ~G~~~A~~~~~~D~lif~DvDli-p~~~~~~-----y-~~~~~----~p~--hls~-----~~~~~-------------- 165 (220)
.|++.| ++|+++|.|.|.. +.++.+. . .-++. +.. .... .....
T Consensus 173 ~G~~~A----~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~~~~l~~~~ 248 (387)
T 3f1y_A 173 RALSVT----RGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELTAKPLFNLF 248 (387)
T ss_dssp HHTTTC----CSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHHHTHHHHHHHH
T ss_pred HHHHhc----CCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhhhhHHHHHHHH
Confidence 998877 8999999999998 6665311 0 00110 000 0000 00000
Q ss_pred ---CCCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHH-HHCCCe
Q psy18177 166 ---KYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRI-KEARIR 214 (220)
Q Consensus 166 ---~~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl-~~~G~~ 214 (220)
........||..+++|+-+.++ +|+ .||| +|.++..|+ ...|++
T Consensus 249 ~~~l~~~~d~~sG~~a~rR~~l~~i-~f~---~gyg-~e~ell~~~~~~~G~~ 296 (387)
T 3f1y_A 249 YPELAGFVQPLAGEFVADRELFCSI-PFL---TGYA-VETGIMIDVLKKVGLG 296 (387)
T ss_dssp CGGGTTCSCTTCSCEEEEHHHHTTS-CEE---CSTT-HHHHHHHHHHHHHCGG
T ss_pred hHhhccccccccccEEEEHHHHHhC-CCC---CCcc-hHHHHHHHHHHhcCCC
Confidence 0022344689999999999999 786 5777 678887777 556876
No 15
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.87 E-value=4.7e-09 Score=92.62 Aligned_cols=141 Identities=16% Similarity=0.154 Sum_probs=93.4
Q ss_pred CCCcceEEEEEecCCHHHHHHHHHHHHHHhhhcC--cceeEEEEEeccC-------------------------cccccc
Q psy18177 61 HDQHELCLIIPFRDRFDELLIFLMHMKVFLERQN--IVYNVYVVNQVDS-------------------------YRFNRG 113 (220)
Q Consensus 61 ~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~--~~~~I~Vveq~~~-------------------------~~FnR~ 113 (220)
+..++||||||+||+.+.|..+|.++. .|. ..++|+|+++.+. ..-.++
T Consensus 45 ~~~~~vSViIp~yN~~~~l~~~l~sl~----~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~n~G~~ 120 (329)
T 3ckj_A 45 KAGRTISVVLPALDEEDTIGSVIDSIS----PLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRPGKG 120 (329)
T ss_dssp TTTCCEEEEEEESSCTTTHHHHHHHHG----GGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCCCSHH
T ss_pred ccCCcEEEEEeeCCCHHHHHHHHHHHH----HhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhccceeeeccCCCCCCHH
Confidence 345789999999999999999999863 443 3589999985321 112345
Q ss_pred hhhhhhHHHhhhcCCCceEEEeccccc-cCCCCcc----c--cCCCCc----eeeeec----------CCCCC-------
Q psy18177 114 SLINVGFLYIQENTHCDFIAMHDVDLI-PINPRLN----Y--SYPGDA----IMHIAA----------PDLHP------- 165 (220)
Q Consensus 114 ~~lN~G~~~A~~~~~~D~lif~DvDli-p~~~~~~----y--~~~~~~----p~hls~----------~~~~~------- 165 (220)
.++|.|++.| ++|+++|+|.|.+ +.++... . .-++.. ...... .....
T Consensus 121 ~a~n~g~~~a----~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (329)
T 3ckj_A 121 EALWRSLAAS----RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVA 196 (329)
T ss_dssp HHHHHHHHHC----CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHHTH
T ss_pred HHHHHHHHhC----CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehhhH
Confidence 7889999877 8999999999998 7776421 1 011100 000000 00000
Q ss_pred ---------C-CCcccccccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHH-CCCe
Q psy18177 166 ---------K-YHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKE-ARIR 214 (220)
Q Consensus 166 ---------~-~~~~~~~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~-~G~~ 214 (220)
. .......||.+++.|+.+.+++ |++. || ||.|+..|+.. .|+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~g~~~~rr~~l~~i~-f~~~---~~-~D~~l~~r~~~~~g~~ 251 (329)
T 3ckj_A 197 RPLLAALRPELGCILQPLGGEYAATRELLTSVP-FAPG---YG-VEIGLLVDTFDRLGLD 251 (329)
T ss_dssp HHHHHHHCGGGGGCSCTTCSCEEEEHHHHTTSC-BCCG---GG-HHHHHHHHHHHHHCGG
T ss_pred HHHHHHhhhhhccccCCCccceeeeHHHHHhCC-CCCC---Cc-ccHHHHHHHHHhcCCc
Confidence 0 0123346788899999999996 8764 44 99999999986 6653
No 16
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.92 E-value=2.2e-05 Score=70.73 Aligned_cols=81 Identities=12% Similarity=0.038 Sum_probs=53.1
Q ss_pred cceEEEEEecCCHHHHHHHHHHHHHHhhhc-CcceeEEEEEecc---------------------CcccccchhhhhhHH
Q psy18177 64 HELCLIIPFRDRFDELLIFLMHMKVFLERQ-NIVYNVYVVNQVD---------------------SYRFNRGSLINVGFL 121 (220)
Q Consensus 64 ~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q-~~~~~I~Vveq~~---------------------~~~FnR~~~lN~G~~ 121 (220)
..++|||+++||++ |+.+|++|.+. +. .-+++|+|.++.. +..+...+..|.|++
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~--~p~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~g~~ 78 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHY--RPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHRKFQ 78 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHH--CSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCGGGH
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhc--CCCcCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCccccccchhhcCcc
Confidence 35789999999998 99999997532 11 1246777765421 112323344555432
Q ss_pred --------------HhhhcCCCceEEEeccccccCCCCcc
Q psy18177 122 --------------YIQENTHCDFIAMHDVDLIPINPRLN 147 (220)
Q Consensus 122 --------------~A~~~~~~D~lif~DvDlip~~~~~~ 147 (220)
.+....++|++||.|.||++.++|..
T Consensus 79 ~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~ 118 (343)
T 1fo8_A 79 GYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFE 118 (343)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHH
T ss_pred cchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHH
Confidence 22223379999999999999999753
No 17
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=96.94 E-value=0.0012 Score=60.40 Aligned_cols=144 Identities=17% Similarity=0.193 Sum_probs=84.9
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccC---------------------------c-----ccccchh
Q psy18177 68 LIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDS---------------------------Y-----RFNRGSL 115 (220)
Q Consensus 68 VIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~---------------------------~-----~FnR~~~ 115 (220)
||||+++ +++..++..+..... ..+++|+||++.+. . .+.+|.+
T Consensus 4 VIiP~~e--E~I~~vl~~l~~~~~--~~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~A 79 (397)
T 2bo4_A 4 VVFPFKH--EHPEVLLHNVRVAAA--HPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDG 79 (397)
T ss_dssp EEEECCS--SCHHHHHHHHHHHHH--STTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHH
T ss_pred EEEeCCc--cCHHHHHHHHHHhcc--CCCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHH
Confidence 6777765 578888877643222 23688999986320 1 3567788
Q ss_pred hhhhHHHhhhcCCCceEEEecccccc-CCCCc---cccC-CCC----c--eee---------eecC----CCC--CCCCc
Q psy18177 116 INVGFLYIQENTHCDFIAMHDVDLIP-INPRL---NYSY-PGD----A--IMH---------IAAP----DLH--PKYHY 169 (220)
Q Consensus 116 lN~G~~~A~~~~~~D~lif~DvDlip-~~~~~---~y~~-~~~----~--p~h---------ls~~----~~~--~~~~~ 169 (220)
++.|++.|++.+++|+++|.|+|+.. .++.+ .... .+. + .++ ++.. .+. .....
T Consensus 80 l~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~~~~~~~~~~i 159 (397)
T 2bo4_A 80 MNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWI 159 (397)
T ss_dssp HHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTSSGGGC
T ss_pred HHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHHHHHHhhcccc
Confidence 99999555433589999999999952 22210 0000 000 0 000 0000 000 00011
Q ss_pred ccccccccccchhhhhhcCCCC--CCCccCCCCcHHHHHHHHHCCCeEe
Q psy18177 170 KTFLGGILMMKNEHFQTVNGLS--NKYWGWGLEDDELYVRIKEARIRIE 216 (220)
Q Consensus 170 ~~~~GG~~~i~kedf~kVnGfd--e~f~GWGgED~Dl~~Rl~~~G~~i~ 216 (220)
....+|-.+++|+-+.++.... ..-.||| .|.++..++...|++|.
T Consensus 160 ~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg-~eiel~~~a~~~G~rI~ 207 (397)
T 2bo4_A 160 EQPLGGELLMRREVAAMLYEDERVRRRSDWG-IDTLYTFVTVQQGVSIY 207 (397)
T ss_dssp SCTTCCCEEEEHHHHHHHHHCHHHHTCCSTT-HHHHHHHHHHHTTCCEE
T ss_pred ccCCcccEEEeHHHHHHHhhhcccCcCCCcc-hHHHHHHHHHHcCCEEE
Confidence 1224688899999998884321 1456777 69999999999999985
No 18
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=96.20 E-value=0.0079 Score=55.11 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=23.2
Q ss_pred cccccccchhhhhhcCCCCCCCccCCCCcHHHHHHHHH
Q psy18177 173 LGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKE 210 (220)
Q Consensus 173 ~GG~~~i~kedf~kVnGfde~f~GWGgED~Dl~~Rl~~ 210 (220)
.+|-.+++++.+.++. |. .|||-|=.-+..=+.+
T Consensus 248 lsGe~A~rr~ll~~L~-~~---~gyGvE~~lLv~~~r~ 281 (394)
T 2zu9_A 248 NAGEHAMTMKLAEILP-FS---TGYSIEPYEIVYILER 281 (394)
T ss_dssp TCSSEEEEHHHHTTCC-EE---SGGGHHHHHHHHHHHH
T ss_pred CchhhHhhHHHHhcCC-CC---CCCCCCHHHHHHHHHh
Confidence 3478999999999885 43 4999775544443333
No 19
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=94.52 E-value=0.044 Score=49.87 Aligned_cols=37 Identities=14% Similarity=0.163 Sum_probs=24.9
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEec
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQV 105 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~ 105 (220)
..++|||||.||=... +|+.+ |+..-.+++|++|+++
T Consensus 52 ~~klSIVVPvYNEe~~---lLesV---l~qi~~d~eIIlVdDG 88 (391)
T 2wvl_A 52 LEQTAIVVPTRNERLK---LLEGV---LSGIPHEALILVASNS 88 (391)
T ss_dssp HTTEEEEEEESSCCHH---HHHHH---HHTSCTTSEEEEEECC
T ss_pred HhceEEEEeccCcHHH---HHHHH---HhcCCCCceEEEEECC
Confidence 4689999999997654 35554 2322236788888765
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=92.57 E-value=0.15 Score=42.53 Aligned_cols=138 Identities=17% Similarity=0.195 Sum_probs=75.5
Q ss_pred cceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcccccchhhhhhHHHhhhcCCCceEEEeccccccCC
Q psy18177 64 HELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYIQENTHCDFIAMHDVDLIPIN 143 (220)
Q Consensus 64 ~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~FnR~~~lN~G~~~A~~~~~~D~lif~DvDlip~~ 143 (220)
++..+.||.++-.. | .|...+.+.++++.+... +. - -+++||..+...+...++|+++|.|+|.+|..
T Consensus 1 ~~~~~~~~~~~~~~-l-----~l~~~l~~~gi~~~l~~~---~S-l--I~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~ 68 (203)
T 2c0n_A 1 MRTLFFIPSMGSVR-L-----PLIDFLVKNDIEYVILSR---RN-H--VAVQREIALDMFLEMKDYDTLAFLDEDVVPIE 68 (203)
T ss_dssp CCEEEEEECSSCCC-H-----HHHHHHHHTTCCEEEECC---CS-C--HHHHHHHHHHHHHHCTTCCEEEEECTTEEEEE
T ss_pred CceEEEeccCCcee-h-----HHHHHHHhCCCeEEEEcc---cc-c--hHHHHHHHHHHHHhcCCCCEEEEEeCCCCccc
Confidence 36778999997443 1 223334555666555443 22 2 24578888777665678999999999955443
Q ss_pred ---CCc-------------cccCCCCceeeeecC--CCCC---CCCcccccccccccchhhhhhc--CCC----CCCCcc
Q psy18177 144 ---PRL-------------NYSYPGDAIMHIAAP--DLHP---KYHYKTFLGGILMMKNEHFQTV--NGL----SNKYWG 196 (220)
Q Consensus 144 ---~~~-------------~y~~~~~~p~hls~~--~~~~---~~~~~~~~GG~~~i~kedf~kV--nGf----de~f~G 196 (220)
+.+ .|...+ .. +.+.. .+.. ..+....-+|-++++|+-|+++ =.| +|.-.-
T Consensus 69 FdPe~V~rLl~~g~DVV~GsYp~K~-~~-~~s~~a~~y~~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~ 146 (203)
T 2c0n_A 69 IDFQKVEAKFNEGYDVVCGYYYLKT-LR-GYSVYRKDWEKEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPH 146 (203)
T ss_dssp CCHHHHHHHHHHTCSEEEEECBCTT-SS-SBSEESSSBCSSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC--------
T ss_pred cCHHHHHHHHhCCCCEEEEEeeccC-CC-ccchHHHHHHHhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhcc
Confidence 211 111111 01 12110 0000 0112233458999999999887 233 222334
Q ss_pred CCCCcHHHHHHHHHCCCeE
Q psy18177 197 WGLEDDELYVRIKEARIRI 215 (220)
Q Consensus 197 WGgED~Dl~~Rl~~~G~~i 215 (220)
|=|||..|..-++..|..+
T Consensus 147 ~~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 147 WIGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp -CCHHHHHHHHHCCCEEEE
T ss_pred ccCCceEEEeccccccccc
Confidence 6679999998887776665
No 21
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=36.77 E-value=63 Score=28.01 Aligned_cols=82 Identities=18% Similarity=0.168 Sum_probs=48.1
Q ss_pred CCcCCCcceEEEEEecCCHHHHHHHHHHHHHHhhhcCcceeEEEEEeccCcc-----ccc--------------chhhhh
Q psy18177 58 STLHDQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYR-----FNR--------------GSLINV 118 (220)
Q Consensus 58 ~~~~~~~kvsVIIP~r~R~~~L~~~L~~l~~~L~~q~~~~~I~Vveq~~~~~-----FnR--------------~~~lN~ 118 (220)
+.-.+..+.++||-+|+|.+.|...+.+++ +-..--+|+|+|-..+++ +.. ...+|.
T Consensus 22 ~g~~~~~~FTvvi~ty~R~~~L~~lv~~~~----~~~~v~~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~nsLnn 97 (293)
T 1omz_A 22 PSKSALDSFTLIMQTYNRTDLLLRLLNHYQ----AVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANKMRN 97 (293)
T ss_dssp ----CTTCEEEEEEESSCHHHHHHHHHHHT----TSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCCGGG
T ss_pred CCCCCCCceEEEEEeecccHHHHHHHHHHh----cCCCCCeEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCCchhh
Confidence 344456789999999999999999988753 222235688888543211 110 012233
Q ss_pred hHHHhhhcCCCceEEEeccccccCCC
Q psy18177 119 GFLYIQENTHCDFIAMHDVDLIPINP 144 (220)
Q Consensus 119 G~~~A~~~~~~D~lif~DvDlip~~~ 144 (220)
=+.-- ..-++|.++..|-|++...+
T Consensus 98 RF~p~-~~i~T~AVLslDDDv~l~~~ 122 (293)
T 1omz_A 98 RLQVF-PEVETNAVLMVDDDTLISAQ 122 (293)
T ss_dssp GGSCC-TTCCSSEEEEECTTEEECHH
T ss_pred ccCCC-ccCCcCEEEEEcCCCCCCHH
Confidence 33211 12367889999999865544
No 22
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A
Probab=31.72 E-value=22 Score=33.49 Aligned_cols=77 Identities=17% Similarity=0.176 Sum_probs=48.2
Q ss_pred CcceEEEEEecCCHHHHHHHHHHHHHHh------hhcCcceeEEEEEec-----cCccc-ccchhhhhhHHHhhhcCCCc
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHMKVFL------ERQNIVYNVYVVNQV-----DSYRF-NRGSLINVGFLYIQENTHCD 130 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l~~~L------~~q~~~~~I~Vveq~-----~~~~F-nR~~~lN~G~~~A~~~~~~D 130 (220)
...|.||.||+...+.|+..|..-.+-+ .=|+-+.+|+|+--. +.-+| .-.+-+|+|+.-| +.-
T Consensus 530 ~~dIgVItpYraQ~~~l~~~l~~~~~~i~v~TVd~fQG~E~dvII~S~vrsn~~~~iGFl~~~rRlNVAlTRA----k~~ 605 (646)
T 4b3f_X 530 ARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRA----RRH 605 (646)
T ss_dssp GGGEEEEESCHHHHHHHHHHHTTTCTTCEEEEGGGGTTCCEEEEEEECCCCCTTCCCCSTTCHHHHHHHHHTE----EEE
T ss_pred cCcEEEECCCHHHHHHHHHHHHHhCCCCEECChhhcccccCCEEEEEeccCCCCCCccccCCcCcEEeEhhhh----hCe
Confidence 4579999999976666655543210000 005567788777421 22244 2235679999987 778
Q ss_pred eEEEeccccccCC
Q psy18177 131 FIAMHDVDLIPIN 143 (220)
Q Consensus 131 ~lif~DvDlip~~ 143 (220)
++|+-|.+.+-.+
T Consensus 606 liivGn~~~l~~~ 618 (646)
T 4b3f_X 606 VAVICDSRTVNNH 618 (646)
T ss_dssp EEEEECHHHHTTS
T ss_pred EEEEEchHHhcCC
Confidence 8999998887554
No 23
>2gk6_A Regulator of nonsense transcripts 1; UPF1, helicase, NMD, hydrolase; HET: ADP; 2.40A {Homo sapiens} PDB: 2gjk_A* 2gk7_A 2xzo_A* 2xzp_A
Probab=24.07 E-value=51 Score=30.96 Aligned_cols=77 Identities=12% Similarity=0.191 Sum_probs=50.1
Q ss_pred CcceEEEEEecCCHHHHHHHHHHH--------HHH-h----hhcCcceeEEEEEecc-----Ccccc-cchhhhhhHHHh
Q psy18177 63 QHELCLIIPFRDRFDELLIFLMHM--------KVF-L----ERQNIVYNVYVVNQVD-----SYRFN-RGSLINVGFLYI 123 (220)
Q Consensus 63 ~~kvsVIIP~r~R~~~L~~~L~~l--------~~~-L----~~q~~~~~I~Vveq~~-----~~~Fn-R~~~lN~G~~~A 123 (220)
..++.||.|++...+.|+..|... ... . .-|+.+++++|+--.. +.+|- -.+.+|+|+.-|
T Consensus 497 ~~dIgVItpy~~Q~~~i~~~l~~~~~~~~~~~~~v~v~TVd~fQG~E~dvVIls~vrs~~~~~~gfl~~~~rlnVAlTRA 576 (624)
T 2gk6_A 497 PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRA 576 (624)
T ss_dssp GGGEEEECSCHHHHHHHHHHHHHSCSSCHHHHHHSEEECHHHHTTCCEEEEEEEECC------CCTTTCHHHHHHHTTSE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHhhccccccccCceEEechhhcCCcccCEEEEEeecCCCCCCccccCCcceeeeehhhh
Confidence 468999999987666666655420 000 0 1167788888775321 22453 357889998877
Q ss_pred hhcCCCceEEEeccccccCC
Q psy18177 124 QENTHCDFIAMHDVDLIPIN 143 (220)
Q Consensus 124 ~~~~~~D~lif~DvDlip~~ 143 (220)
+.-++++.|.+.+-.+
T Consensus 577 ----k~~L~ivg~~~~l~~~ 592 (624)
T 2gk6_A 577 ----RYGVIIVGNPKALSKQ 592 (624)
T ss_dssp ----EEEEEEEECHHHHTTS
T ss_pred ----hCcEEEEECHHHHccC
Confidence 7778999998887543
No 24
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=23.72 E-value=2.3e+02 Score=25.06 Aligned_cols=25 Identities=12% Similarity=0.113 Sum_probs=21.6
Q ss_pred CCcceEEEEEecCCHHHHHHHHHHH
Q psy18177 62 DQHELCLIIPFRDRFDELLIFLMHM 86 (220)
Q Consensus 62 ~~~kvsVIIP~r~R~~~L~~~L~~l 86 (220)
...++|++|-.++..+++.+++..+
T Consensus 82 ~~~kiAflil~h~d~~~l~rll~~l 106 (391)
T 2gak_A 82 VGFPIAYSIVVHHKIEMLDRLLRAI 106 (391)
T ss_dssp HTSCEEEEEEECSCHHHHHHHHHHH
T ss_pred cCCCEEEEEEecCCHHHHHHHHHHH
Confidence 3579999999999999999888765
No 25
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=21.52 E-value=58 Score=22.62 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=19.0
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHhccccccceeecCCC
Q psy18177 13 NKLLRSNKILSILILLCLIITLLIILLINVQGCDCNSVG 51 (220)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 51 (220)
-++||---.+--.+++..+|.+.++ ..|+|....
T Consensus 16 Y~tLRigGLifA~vLfi~GI~iilS-----~kcrCk~~q 49 (74)
T 2zxe_G 16 YYRLRVVGLIVAAVLCVIGIIILLA-----GKCRCKFNQ 49 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT-----TC-------
T ss_pred hHHheeccchhHHHHHHHHHHHHHc-----CccccCCCC
Confidence 3566666666666788888887776 689997643
Done!