Diaphorina citri psyllid: psy18177


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
MTVYMGIWKIFTNKLLRSNKILSILILLCLIITLLIILLINVQGCDCNSVGGSLLSQSTLHDQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNYSYPGDAIMHIAAPDLHPKYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPEN
ccEEcccccccccccccccccccccccEEEEEEEccHHHHHHHcccccccccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHccEEEEEEEEEEccccccccccccHHHHHHHHHcccCEEEEEEccccccccccccCCcccccccccccccccccccccccccccccccccHHHHHccccccccccccccHHHHHHHHHcccEEEcccc
*TVYMGIWKIFTNKLLRSNKILSILILLCLIITLLIILLINVQGCDCNSVGGSLLSQSTLHDQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNYSYPGDAIMHIAAPDLHPKYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIE****
xxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MTVYMGIWKIFTNKLLRSNKILSILILLCLIITLLIILLINVQGCDCNSVGGSLLSQSTLHDQHELCLIIPFRDRFDELLIFLMHMKVFLERQNIVYNVYVVNQVDSYRFNRGSLINVGFLYIQENTHCDFIAMHDVDLIPINPRLNYSYPGDAIMHIAAPDLHPKYHYKTFLGGILMMKNEHFQTVNGLSNKYWGWGLEDDELYVRIKEARIRIERPEN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Beta-1,4-galactosyltransferase 7 Required for the biosynthesis of the tetrasaccharide linkage region of proteoglycans, especially for small proteoglycans in skin fibroblasts.confidentQ8R087
Probable galactosyltransferase sqv-3 confidentP34548
Beta-1,4-galactosyltransferase 7 Required for the biosynthesis of the tetrasaccharide linkage region of proteoglycans, especially for small proteoglycans in skin fibroblasts.confidentQ9UBV7

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006024 [BP]glycosaminoglycan biosynthetic processprobableGO:1901576, GO:0044710, GO:0030203, GO:1901564, GO:1901566, GO:1901137, GO:1901135, GO:0043170, GO:0008150, GO:0071704, GO:0009058, GO:0009059, GO:0006807, GO:0008152, GO:0006022, GO:0006023
GO:0016021 [CC]integral to membraneprobableGO:0005575, GO:0044425, GO:0016020, GO:0031224
GO:0044249 [BP]cellular biosynthetic processprobableGO:0009058, GO:0009987, GO:0008150, GO:0008152, GO:0044237
GO:0009100 [BP]glycoprotein metabolic processprobableGO:0044238, GO:0044260, GO:0019538, GO:1901135, GO:0009987, GO:0044237, GO:0043170, GO:0071704, GO:0008150, GO:0008152
GO:0046525 [MF]xylosylprotein 4-beta-galactosyltransferase activityprobableGO:0003674, GO:0035250, GO:0003824, GO:0016740, GO:0008378, GO:0016757, GO:0016758, GO:0008194
GO:0008376 [MF]acetylgalactosaminyltransferase activityprobableGO:0003824, GO:0016740, GO:0003674, GO:0016757, GO:0016758, GO:0008194
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3LW6, chain A
Confidence level:very confident
Coverage over the Query: 60-220
View the alignment between query and template
View the model in PyMOL