Your job contains 1 sequence.
>psy18180
MLDKKVFRDVSLLLVNSKMDNEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLEC
LQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDENLWNQIQKYYKKEVDQKLFDQDDGV
WENYHQHISTYLLTAPTYLQHMI
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy18180
(143 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BSL1 - symbol:E1BSL1 "Uncharacterized protein... 226 6.6e-18 1
UNIPROTKB|Q6INS5 - symbol:rnf168 "E3 ubiquitin-protein li... 202 2.5e-15 1
RGD|1585168 - symbol:Rnf168 "ring finger protein 168, E3 ... 202 2.5e-15 1
UNIPROTKB|F1M8E0 - symbol:Rnf168 "E3 ubiquitin-protein li... 202 2.5e-15 1
UNIPROTKB|B0BLU1 - symbol:rnf168 "E3 ubiquitin-protein li... 201 2.9e-15 1
MGI|MGI:1917488 - symbol:Rnf168 "ring finger protein 168"... 199 5.3e-15 1
UNIPROTKB|F8WD60 - symbol:RNF168 "E3 ubiquitin-protein li... 188 8.8e-15 1
UNIPROTKB|G3X8D4 - symbol:RNF168 "E3 ubiquitin-protein li... 187 1.1e-14 1
RGD|1560267 - symbol:RGD1560267 "similar to ring finger p... 182 3.8e-14 1
UNIPROTKB|E2R9S2 - symbol:RNF168 "Uncharacterized protein... 191 4.0e-14 1
UNIPROTKB|Q8IYW5 - symbol:RNF168 "E3 ubiquitin-protein li... 191 4.0e-14 1
ZFIN|ZDB-GENE-030131-6013 - symbol:rnf168 "ring finger pr... 187 7.4e-14 1
UNIPROTKB|F1MSN8 - symbol:RNF168 "E3 ubiquitin-protein li... 187 1.1e-13 1
UNIPROTKB|Q0IIM1 - symbol:RNF168 "E3 ubiquitin-protein li... 187 1.1e-13 1
UNIPROTKB|G3X8F3 - symbol:G3X8F3 "Uncharacterized protein... 166 1.7e-11 1
CGD|CAL0002668 - symbol:TRY3 species:5476 "Candida albica... 149 6.0e-11 2
UNIPROTKB|Q5A1M4 - symbol:CaO19.1971 "Potential zinc RING... 149 6.0e-11 2
GENEDB_PFALCIPARUM|PF11_0244 - symbol:PF11_0244 "hypothet... 150 1.4e-09 1
UNIPROTKB|Q8IID0 - symbol:PF11_0244 "Conserved Plasmodium... 150 1.4e-09 1
ZFIN|ZDB-GENE-030131-8303 - symbol:si:ch1073-440b2.1 "si:... 146 2.2e-09 1
UNIPROTKB|B3KUN7 - symbol:LONRF3 "LON peptidase N-termina... 140 1.0e-08 1
UNIPROTKB|H0Y7Q8 - symbol:LONRF3 "LON peptidase N-termina... 140 1.1e-08 1
ZFIN|ZDB-GENE-081104-397 - symbol:lonrf1l "LON peptidase ... 129 1.3e-08 2
UNIPROTKB|E1B964 - symbol:LOC100849413 "Uncharacterized p... 124 1.4e-08 2
UNIPROTKB|F1NNQ7 - symbol:Gga.54568 "Uncharacterized prot... 139 1.8e-08 1
UNIPROTKB|Q496Y0 - symbol:LONRF3 "LON peptidase N-termina... 140 1.8e-08 1
UNIPROTKB|F1P5G6 - symbol:LONRF2 "Uncharacterized protein... 139 2.3e-08 1
UNIPROTKB|F1PPT8 - symbol:LONRF2 "Uncharacterized protein... 138 3.3e-08 1
UNIPROTKB|Q1L5Z9 - symbol:LONRF2 "LON peptidase N-termina... 137 3.8e-08 1
UNIPROTKB|F1PSB6 - symbol:LONRF3 "Uncharacterized protein... 137 3.9e-08 1
UNIPROTKB|F1STF3 - symbol:LONRF2 "Uncharacterized protein... 135 4.0e-08 1
UNIPROTKB|I3LHE2 - symbol:LONRF2 "Uncharacterized protein... 135 4.2e-08 1
UNIPROTKB|K7GS78 - symbol:LONRF3 "Uncharacterized protein... 136 4.4e-08 1
UNIPROTKB|K7GKX2 - symbol:LONRF3 "Uncharacterized protein... 136 4.5e-08 1
UNIPROTKB|K7GLC4 - symbol:LONRF3 "Uncharacterized protein... 136 4.9e-08 1
UNIPROTKB|G3X6C1 - symbol:LONRF3 "Uncharacterized protein... 136 4.9e-08 1
UNIPROTKB|F1RU80 - symbol:LONRF3 "Uncharacterized protein... 136 5.2e-08 1
UNIPROTKB|E2RD88 - symbol:RNF135 "Uncharacterized protein... 117 6.7e-08 2
RGD|1562137 - symbol:Lonrf2 "LON peptidase N-terminal dom... 132 7.7e-08 1
WB|WBGene00011366 - symbol:T02C1.2 species:6239 "Caenorha... 126 1.0e-07 1
MGI|MGI:1914754 - symbol:Rnf151 "ring finger protein 151"... 121 2.5e-07 1
UNIPROTKB|B0V1M0 - symbol:TRIM31 "E3 ubiquitin-protein li... 121 2.8e-07 1
UNIPROTKB|Q2TBT8 - symbol:RNF151 "RING finger protein 151... 120 3.3e-07 1
UNIPROTKB|F1Q031 - symbol:RNF151 "Uncharacterized protein... 120 3.4e-07 1
RGD|1309302 - symbol:Rnf151 "ring finger protein 151" spe... 119 4.1e-07 1
UNIPROTKB|H7C5V9 - symbol:LONRF1 "LON peptidase N-termina... 123 4.3e-07 1
UNIPROTKB|I3L5Q2 - symbol:RNF151 "Uncharacterized protein... 118 5.0e-07 1
ZFIN|ZDB-GENE-071004-80 - symbol:zgc:171260 "zgc:171260" ... 123 5.8e-07 1
MGI|MGI:1921615 - symbol:Lonrf3 "LON peptidase N-terminal... 125 7.3e-07 1
MGI|MGI:106657 - symbol:Trim21 "tripartite motif-containi... 122 7.9e-07 1
MGI|MGI:1919206 - symbol:Rnf135 "ring finger protein 135"... 121 8.4e-07 1
UNIPROTKB|A6NI17 - symbol:TRIM31 "E3 ubiquitin-protein li... 121 8.7e-07 1
UNIPROTKB|C9JJD5 - symbol:TRIM31 "E3 ubiquitin-protein li... 121 8.7e-07 1
UNIPROTKB|E7ETS6 - symbol:TRIM31 "E3 ubiquitin-protein li... 121 8.7e-07 1
UNIPROTKB|F8W1J7 - symbol:TRIM31 "E3 ubiquitin-protein li... 121 8.7e-07 1
UNIPROTKB|G8JLN1 - symbol:TRIM31 "E3 ubiquitin-protein li... 121 8.7e-07 1
UNIPROTKB|Q9BZY9 - symbol:TRIM31 "E3 ubiquitin-protein li... 121 8.7e-07 1
UNIPROTKB|I3LT33 - symbol:LONRF1 "Uncharacterized protein... 124 8.8e-07 1
ZFIN|ZDB-GENE-081030-6 - symbol:trim35-38 "tripartite mot... 121 9.5e-07 1
UNIPROTKB|F1SEU6 - symbol:LONRF1 "Uncharacterized protein... 124 9.6e-07 1
UNIPROTKB|Q2KHN1 - symbol:RNF151 "RING finger protein 151... 116 9.8e-07 1
RGD|1562583 - symbol:Lonrf1 "LON peptidase N-terminal dom... 124 1.0e-06 1
ZFIN|ZDB-GENE-081030-14 - symbol:trim35-37 "tripartite mo... 120 1.0e-06 1
ZFIN|ZDB-GENE-081030-9 - symbol:trim35-35 "tripartite mot... 120 1.2e-06 1
UNIPROTKB|J9P3L7 - symbol:LONRF1 "Uncharacterized protein... 123 1.2e-06 1
UNIPROTKB|Q17RB8 - symbol:LONRF1 "LON peptidase N-termina... 123 1.2e-06 1
UNIPROTKB|H7C3H8 - symbol:RNF135 "E3 ubiquitin-protein li... 111 1.3e-06 1
RGD|1305795 - symbol:Trim21 "tripartite motif-containing ... 120 1.3e-06 1
ZFIN|ZDB-GENE-080516-2 - symbol:btr06 "bloodthirsty-relat... 120 1.7e-06 1
ZFIN|ZDB-GENE-040801-199 - symbol:trim35-36 "tripartite m... 118 2.0e-06 1
ZFIN|ZDB-GENE-040718-482 - symbol:zgc:92594 "zgc:92594" s... 105 2.0e-06 2
POMBASE|SPAC6B12.07c - symbol:SPAC6B12.07c "ubiquitin-pro... 118 2.1e-06 1
UNIPROTKB|E1BSU9 - symbol:LOC416147 "Uncharacterized prot... 114 2.2e-06 1
RGD|1305252 - symbol:Rnf135 "ring finger protein 135" spe... 117 2.3e-06 1
RGD|1359438 - symbol:Trim10 "tripartite motif-containing ... 118 2.3e-06 1
UNIPROTKB|F1P3J6 - symbol:Gga.40071 "Uncharacterized prot... 119 2.4e-06 1
DICTYBASE|DDB_G0285953 - symbol:DDB_G0285953 species:4468... 118 2.4e-06 1
UNIPROTKB|F1RHN8 - symbol:TRIM21 "Uncharacterized protein... 117 2.7e-06 1
MGI|MGI:1338757 - symbol:Trim10 "tripartite motif-contain... 117 2.9e-06 1
ZFIN|ZDB-GENE-080219-8 - symbol:btr05 "bloodthirsty-relat... 117 3.1e-06 1
ZFIN|ZDB-GENE-081030-23 - symbol:trim35-34 "tripartite mo... 116 3.3e-06 1
ZFIN|ZDB-GENE-070705-379 - symbol:btr27 "bloodthirsty-rel... 117 3.4e-06 1
UNIPROTKB|F1PIC3 - symbol:TRIM10 "Uncharacterized protein... 116 3.6e-06 1
RGD|1307023 - symbol:Rhot1 "ras homolog family member T1"... 117 3.9e-06 1
UNIPROTKB|Q6QI24 - symbol:Rhot1 "Protein Rhot1" species:1... 117 3.9e-06 1
ZFIN|ZDB-GENE-101021-4 - symbol:lonrf1 "LON peptidase N-t... 117 3.9e-06 1
ZFIN|ZDB-GENE-081031-1 - symbol:trim35-33 "tripartite mot... 115 4.4e-06 1
ZFIN|ZDB-GENE-080213-2 - symbol:btr18 "bloodthirsty-relat... 115 5.4e-06 1
UNIPROTKB|Q7YRV4 - symbol:TRIM21 "E3 ubiquitin-protein li... 114 5.8e-06 1
UNIPROTKB|F1PJN4 - symbol:UHRF1 "Uncharacterized protein"... 105 5.9e-06 2
UNIPROTKB|G3MWU8 - symbol:TRIM21 "E3 ubiquitin-protein li... 114 6.6e-06 1
ASPGD|ASPL0000000141 - symbol:AN5961 species:162425 "Emer... 115 6.7e-06 1
ZFIN|ZDB-GENE-070620-19 - symbol:ftr54 "finTRIM family, m... 113 6.8e-06 1
UNIPROTKB|F5H012 - symbol:TRIM21 "E3 ubiquitin-protein li... 113 7.5e-06 1
UNIPROTKB|P19474 - symbol:TRIM21 "E3 ubiquitin-protein li... 113 7.5e-06 1
UNIPROTKB|F1P4F7 - symbol:UHRF1 "Uncharacterized protein"... 115 8.3e-06 1
TAIR|locus:2086666 - symbol:AT3G27330 species:3702 "Arabi... 116 8.5e-06 1
ZFIN|ZDB-GENE-020620-2 - symbol:bty "bloodthirsty" specie... 113 8.9e-06 1
ZFIN|ZDB-GENE-040426-2039 - symbol:uhrf1 "ubiquitin-like,... 115 8.9e-06 1
ZFIN|ZDB-GENE-070424-178 - symbol:trim35-19 "tripartite m... 112 9.2e-06 1
WARNING: Descriptions of 144 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|E1BSL1 [details] [associations]
symbol:E1BSL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0035861 "site of double-strand break" evidence=IEA] [GO:0036351
"histone H2A-K13 ubiquitination" evidence=IEA] [GO:0036352 "histone
H2A-K15 ubiquitination" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0045900 "negative regulation of translational elongation"
evidence=IEA] [GO:0070530 "K63-linked polyubiquitin binding"
evidence=IEA] [GO:0070535 "histone H2A K63-linked ubiquitination"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302
GO:GO:0004842 GO:GO:0045739 GO:GO:0000151 GO:GO:0070535 OMA:KSIFQMF
GeneTree:ENSGT00620000087973 EMBL:AADN02024264 IPI:IPI00598198
Ensembl:ENSGALT00000010322 Uniprot:E1BSL1
Length = 572
Score = 226 (84.6 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 41/104 (39%), Positives = 63/104 (60%)
Query: 26 SNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRR 85
S L+ D LC +C + ++P+ LPCNH +C C Q +N++L CP CR+R+S W R
Sbjct: 5 SEAPLSLDDCLCQICMEVFVEPVTLPCNHTICNSCFQLTVENASLCCPFCRRRVSSWARY 64
Query: 86 NKDFSLLIDENLWNQIQKYYKKEVDQKLFDQD--DGVWENYHQH 127
N + LI+ LW +IQK Y KE ++++ QD + V+ + QH
Sbjct: 65 NARRNTLINWELWEKIQKKYPKECERRINGQDLEELVFVPHPQH 108
>UNIPROTKB|Q6INS5 [details] [associations]
symbol:rnf168 "E3 ubiquitin-protein ligase RNF168"
species:8355 "Xenopus laevis" [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0035518
"histone H2A monoubiquitination" evidence=ISS] [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0036351 "histone H2A-K13
ubiquitination" evidence=ISS] [GO:0036352 "histone H2A-K15
ubiquitination" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0045190 "isotype switching" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISS] [GO:0045900 "negative
regulation of translational elongation" evidence=ISS] [GO:0070530
"K63-linked polyubiquitin binding" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS] [GO:0070535
"histone H2A K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006302 GO:GO:0006511 GO:GO:0045190
GO:GO:0004842 GO:GO:0042393 GO:GO:0045739 GO:GO:0000151
GO:GO:0035518 GO:GO:0045900 GO:GO:0035861 GO:GO:0070530 HSSP:Q13049
CTD:165918 HOVERGEN:HBG067220 GO:GO:0070535 GO:GO:0036351
GO:GO:0036352 EMBL:BC072198 RefSeq:NP_001085123.1 UniGene:Xl.6274
ProteinModelPortal:Q6INS5 GeneID:432198 KEGG:xla:432198
Xenbase:XB-GENE-5765277 Uniprot:Q6INS5
Length = 557
Score = 202 (76.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 36 LCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDE 95
+C +CQ IL++P+ LPC H +C C Q + ++L CP CRKR+S W R + L++
Sbjct: 15 ICPICQEILLEPVTLPCKHTLCNPCFQMTVEKASLCCPFCRKRVSTWARLHSRTRTLVNT 74
Query: 96 NLWNQIQKYYKKEVDQKLFDQD 117
LW +IQK Y KE ++ Q+
Sbjct: 75 ELWERIQKQYPKECQRRASGQE 96
>RGD|1585168 [details] [associations]
symbol:Rnf168 "ring finger protein 168, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin
ligase complex" evidence=ISO;ISS] [GO:0003682 "chromatin binding"
evidence=ISO;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0006302 "double-strand break repair" evidence=ISO;ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=ISO;ISS]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISS] [GO:0031491
"nucleosome binding" evidence=IEA;ISO] [GO:0035518 "histone H2A
monoubiquitination" evidence=ISO;ISS] [GO:0035861 "site of
double-strand break" evidence=ISO;ISS] [GO:0036351 "histone H2A-K13
ubiquitination" evidence=ISO;ISS] [GO:0036352 "histone H2A-K15
ubiquitination" evidence=ISO;ISS] [GO:0042393 "histone binding"
evidence=ISO;ISS] [GO:0043130 "ubiquitin binding" evidence=ISO;ISS]
[GO:0045190 "isotype switching" evidence=ISO;ISS] [GO:0045739
"positive regulation of DNA repair" evidence=ISO;ISS] [GO:0045900
"negative regulation of translational elongation" evidence=ISO;ISS]
[GO:0070530 "K63-linked polyubiquitin binding" evidence=ISO;ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;ISS]
[GO:0070535 "histone H2A K63-linked ubiquitination"
evidence=ISO;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 RGD:1585168 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0010212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302 GO:GO:0006511
GO:GO:0045190 GO:GO:0004842 GO:GO:0042393 GO:GO:0045739
GO:GO:0000151 GO:GO:0035518 GO:GO:0045900 GO:GO:0035861
GO:GO:0070530 CTD:165918 HOGENOM:HOG000154156 HOVERGEN:HBG067220
OrthoDB:EOG4THVT2 GO:GO:0070535 GO:GO:0036351 GO:GO:0036352
eggNOG:NOG292819 EMBL:BC166869 IPI:IPI00764042
RefSeq:NP_001121069.2 UniGene:Rn.101441 ProteinModelPortal:B2RYR0
STRING:B2RYR0 PRIDE:B2RYR0 GeneID:690043 KEGG:rno:690043
UCSC:RGD:1585168 NextBio:740065 ArrayExpress:B2RYR0
Genevestigator:B2RYR0 Uniprot:B2RYR0
Length = 564
Score = 202 (76.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 38/104 (36%), Positives = 61/104 (58%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C IL++P+ LPCNH +C C Q + +NL CP CR+R+S W R + + L++ +
Sbjct: 16 CGICMEILVEPVTLPCNHTLCNPCFQSTVEKANLCCPFCRRRVSSWTRYHTRRNSLVNTD 75
Query: 97 LWNQIQKYYKKEVDQKLFDQDDGVWENYHQHISTYLLTAPTYLQ 140
LW IQK+Y KE ++ Q+ + +Q + LL+ P L+
Sbjct: 76 LWEIIQKHYAKECKLRISGQESKEIVDEYQPVR--LLSKPGELR 117
>UNIPROTKB|F1M8E0 [details] [associations]
symbol:Rnf168 "E3 ubiquitin-protein ligase RNF168"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
RGD:1585168 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302
GO:GO:0004842 GO:GO:0045739 GO:GO:0000151 GO:GO:0070535
GeneTree:ENSGT00620000087973 IPI:IPI00764042
Ensembl:ENSRNOT00000002395 ArrayExpress:F1M8E0 Uniprot:F1M8E0
Length = 565
Score = 202 (76.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 38/104 (36%), Positives = 61/104 (58%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C IL++P+ LPCNH +C C Q + +NL CP CR+R+S W R + + L++ +
Sbjct: 18 CGICMEILVEPVTLPCNHTLCNPCFQSTVEKANLCCPFCRRRVSSWTRYHTRRNSLVNTD 77
Query: 97 LWNQIQKYYKKEVDQKLFDQDDGVWENYHQHISTYLLTAPTYLQ 140
LW IQK+Y KE ++ Q+ + +Q + LL+ P L+
Sbjct: 78 LWEIIQKHYAKECKLRISGQESKEIVDEYQPVR--LLSKPGELR 119
>UNIPROTKB|B0BLU1 [details] [associations]
symbol:rnf168 "E3 ubiquitin-protein ligase RNF168"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000151 "ubiquitin
ligase complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0035518
"histone H2A monoubiquitination" evidence=ISS] [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0036351 "histone H2A-K13
ubiquitination" evidence=ISS] [GO:0036352 "histone H2A-K15
ubiquitination" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0045190 "isotype switching" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISS] [GO:0045900 "negative
regulation of translational elongation" evidence=ISS] [GO:0070530
"K63-linked polyubiquitin binding" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS] [GO:0070535
"histone H2A K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006302 GO:GO:0006511 GO:GO:0045190
GO:GO:0004842 GO:GO:0042393 GO:GO:0045739 GO:GO:0000151
GO:GO:0035518 GO:GO:0045900 GO:GO:0035861 GO:GO:0070530 CTD:165918
HOGENOM:HOG000154156 HOVERGEN:HBG067220 GO:GO:0070535 GO:GO:0036351
GO:GO:0036352 eggNOG:NOG292819 EMBL:BC158160 RefSeq:NP_001119969.1
UniGene:Str.57227 ProteinModelPortal:B0BLU1 STRING:B0BLU1
GeneID:100144920 KEGG:xtr:100144920 Xenbase:XB-GENE-5765249
Uniprot:B0BLU1
Length = 535
Score = 201 (75.8 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 36 LCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDE 95
+C +CQ IL++P+ LPC H +C C Q + ++L CP CRKR+S W R++ L+++
Sbjct: 15 ICPICQEILLEPVTLPCKHTLCNPCFQMTVEKASLCCPFCRKRVSTWARQHSRTRTLVNK 74
Query: 96 NLWNQIQKYYKKEVDQKLFDQD 117
LW IQK Y K+ ++ Q+
Sbjct: 75 ELWEVIQKQYPKQCQRRASGQE 96
>MGI|MGI:1917488 [details] [associations]
symbol:Rnf168 "ring finger protein 168" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010212 "response
to ionizing radiation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=ISO] [GO:0035518 "histone
H2A monoubiquitination" evidence=ISO] [GO:0035861 "site of
double-strand break" evidence=ISO] [GO:0036351 "histone H2A-K13
ubiquitination" evidence=ISO] [GO:0036352 "histone H2A-K15
ubiquitination" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043130 "ubiquitin binding" evidence=ISO]
[GO:0045190 "isotype switching" evidence=IMP] [GO:0045739 "positive
regulation of DNA repair" evidence=ISO] [GO:0045900 "negative
regulation of translational elongation" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0070530 "K63-linked
polyubiquitin binding" evidence=ISO] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISO] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1917488
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006302 GO:GO:0006511 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 GO:GO:0035518
GO:GO:0045900 GO:GO:0035861 GO:GO:0070530 CTD:165918
HOGENOM:HOG000154156 HOVERGEN:HBG067220 OrthoDB:EOG4THVT2
GO:GO:0070535 GO:GO:0036351 GO:GO:0036352 eggNOG:NOG292819
EMBL:AC126265 EMBL:BC046815 IPI:IPI00330736 RefSeq:NP_081631.2
UniGene:Mm.228263 ProteinModelPortal:Q80XJ2 SMR:Q80XJ2
STRING:Q80XJ2 PhosphoSite:Q80XJ2 PRIDE:Q80XJ2
Ensembl:ENSMUST00000014218 GeneID:70238 KEGG:mmu:70238
UCSC:uc007yyo.2 GeneTree:ENSGT00620000087973 InParanoid:Q80XJ2
NextBio:331230 Bgee:Q80XJ2 CleanEx:MM_RNF168 Genevestigator:Q80XJ2
GermOnline:ENSMUSG00000014074 Uniprot:Q80XJ2
Length = 565
Score = 199 (75.1 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C IL++P+ LPCNH +C C Q + +NL CP CR+R+S W R + + L++ +
Sbjct: 16 CGICMEILLEPVTLPCNHTLCNPCFQSTVEKANLCCPFCRRRVSSWTRYHTRRNSLVNTD 75
Query: 97 LWNQIQKYYKKEVDQKLFDQD 117
LW IQK+Y KE ++ Q+
Sbjct: 76 LWEIIQKHYAKECKLRISGQE 96
>UNIPROTKB|F8WD60 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC092933 EMBL:AC117490 HGNC:HGNC:26661 IPI:IPI00925077
ProteinModelPortal:F8WD60 SMR:F8WD60 Ensembl:ENST00000437070
ArrayExpress:F8WD60 Bgee:F8WD60 Uniprot:F8WD60
Length = 116
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C IL++P+ LPCNH +C C Q + ++L CP CR+R+S W R + + L++
Sbjct: 16 CGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSLVNVE 75
Query: 97 LWNQIQKYYKKEVDQKLFDQD 117
LW IQK+Y +E + Q+
Sbjct: 76 LWTIIQKHYPRECKLRASGQE 96
>UNIPROTKB|G3X8D4 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9913 "Bos taurus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00620000087973 EMBL:DAAA02001689
Ensembl:ENSBTAT00000056454 Uniprot:G3X8D4
Length = 190
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 36/104 (34%), Positives = 57/104 (54%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C IL +P+ LPCNH +C C + + ++L CP CR+R+S W R + L++
Sbjct: 16 CQICVEILFEPVTLPCNHTLCKPCFESTVEKASLCCPFCRRRVSSWARYRSRTNSLVNME 75
Query: 97 LWNQIQKYYKKEVDQKLFDQDDGVWENYHQHISTYLLTAPTYLQ 140
LW IQK+Y KE + Q+ + +Q + LL+ P L+
Sbjct: 76 LWEIIQKHYPKECKLRASGQESKEIVDDYQPVR--LLSKPGELR 117
>RGD|1560267 [details] [associations]
symbol:RGD1560267 "similar to ring finger protein 168"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
RGD:1560267 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00362874 Ensembl:ENSRNOT00000064441
Uniprot:F1LYM1
Length = 197
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDF 89
L+ + CL+C LI+PI +PCNH +C C + + +NL CP CR +S W R +
Sbjct: 11 LSLEDCQCLLCMEFLIEPITMPCNHTMCKSCFKALLRKTNLFCPFCRSWISSWARYHTHV 70
Query: 90 SLLIDENLWNQIQKYYKKE 108
+ LI++ LW +IQ Y +E
Sbjct: 71 NSLINKELWERIQTQYPEE 89
>UNIPROTKB|E2R9S2 [details] [associations]
symbol:RNF168 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070535 "histone H2A K63-linked
ubiquitination" evidence=IEA] [GO:0070530 "K63-linked polyubiquitin
binding" evidence=IEA] [GO:0045900 "negative regulation of
translational elongation" evidence=IEA] [GO:0045739 "positive
regulation of DNA repair" evidence=IEA] [GO:0045190 "isotype
switching" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0036352 "histone H2A-K15 ubiquitination"
evidence=IEA] [GO:0036351 "histone H2A-K13 ubiquitination"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006302 GO:GO:0004842 GO:GO:0045739 GO:GO:0000151 CTD:165918
GO:GO:0070535 OMA:KSIFQMF GeneTree:ENSGT00620000087973
EMBL:AAEX03017096 RefSeq:XP_545152.1 ProteinModelPortal:E2R9S2
Ensembl:ENSCAFT00000020652 GeneID:488029 KEGG:cfa:488029
NextBio:20861476 Uniprot:E2R9S2
Length = 570
Score = 191 (72.3 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 38/105 (36%), Positives = 62/105 (59%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C IL++PI LPC H +C C Q + ++L CP CR+R+S W R + + L++
Sbjct: 16 CRICVDILVEPITLPCGHTLCSPCFQATVEKASLCCPFCRRRVSSWTRYHTRRNSLVNAE 75
Query: 97 LWNQIQKYYKKEVDQKLFDQD-DGVWENYHQHISTYLLTAPTYLQ 140
LW IQK+Y +E ++ Q+ + V ++Y Q + LL+ P L+
Sbjct: 76 LWAVIQKHYARECKRRASGQEPEDVVDDY-QPVR--LLSKPGELR 117
>UNIPROTKB|Q8IYW5 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010212 "response to
ionizing radiation" evidence=IDA] [GO:0045739 "positive regulation
of DNA repair" evidence=IDA] [GO:0006302 "double-strand break
repair" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0070535 "histone H2A K63-linked ubiquitination"
evidence=IMP;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0043130
"ubiquitin binding" evidence=IDA] [GO:0045190 "isotype switching"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IDA] [GO:0031491 "nucleosome binding" evidence=IDA]
[GO:0035861 "site of double-strand break" evidence=IDA] [GO:0070530
"K63-linked polyubiquitin binding" evidence=IDA] [GO:0045900
"negative regulation of translational elongation" evidence=IMP]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0036351 "histone H2A-K13 ubiquitination"
evidence=IDA] [GO:0036352 "histone H2A-K15 ubiquitination"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0070534 "protein K63-linked ubiquitination" evidence=IDA]
[GO:0036297 "interstrand cross-link repair" evidence=TAS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006302 GO:GO:0006511 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 GO:GO:0031491
GO:GO:0035518 GO:GO:0036297 GO:GO:0045900 GO:GO:0035861
GO:GO:0070530 EMBL:AC092933 CTD:165918 HOGENOM:HOG000154156
HOVERGEN:HBG067220 OrthoDB:EOG4THVT2 GO:GO:0070535 GO:GO:0036351
GO:GO:0036352 eggNOG:NOG292819 EMBL:AK054732 EMBL:AK093113
EMBL:AC117490 EMBL:BC033791 IPI:IPI00217899 RefSeq:NP_689830.2
UniGene:Hs.250648 PDB:3L11 PDBsum:3L11 ProteinModelPortal:Q8IYW5
SMR:Q8IYW5 DIP:DIP-37451N IntAct:Q8IYW5 MINT:MINT-1180501
STRING:Q8IYW5 PhosphoSite:Q8IYW5 DMDM:74762499 PaxDb:Q8IYW5
PRIDE:Q8IYW5 Ensembl:ENST00000318037 GeneID:165918 KEGG:hsa:165918
UCSC:uc003fwq.3 GeneCards:GC03M196195 HGNC:HGNC:26661 MIM:611943
MIM:612688 neXtProt:NX_Q8IYW5 PharmGKB:PA134945219
InParanoid:Q8IYW5 OMA:KSIFQMF PhylomeDB:Q8IYW5
EvolutionaryTrace:Q8IYW5 GenomeRNAi:165918 NextBio:88572
ArrayExpress:Q8IYW5 Bgee:Q8IYW5 CleanEx:HS_RNF168
Genevestigator:Q8IYW5 GermOnline:ENSG00000163961 Uniprot:Q8IYW5
Length = 571
Score = 191 (72.3 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 38/105 (36%), Positives = 62/105 (59%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C IL++P+ LPCNH +C C Q + ++L CP CR+R+S W R + + L++
Sbjct: 16 CGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSLVNVE 75
Query: 97 LWNQIQKYYKKEVDQKLFDQD-DGVWENYHQHISTYLLTAPTYLQ 140
LW IQK+Y +E + Q+ + V ++Y Q + LL+ P L+
Sbjct: 76 LWTIIQKHYPRECKLRASGQESEEVADDY-QPVR--LLSKPGELR 117
>ZFIN|ZDB-GENE-030131-6013 [details] [associations]
symbol:rnf168 "ring finger protein 168"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0035518
"histone H2A monoubiquitination" evidence=ISS] [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0045190 "isotype switching"
evidence=ISS] [GO:0045900 "negative regulation of translational
elongation" evidence=ISS] [GO:0043130 "ubiquitin binding"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0036351 "histone H2A-K13 ubiquitination"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045739 "positive regulation of DNA repair" evidence=ISS]
[GO:0070530 "K63-linked polyubiquitin binding" evidence=ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006302 "double-strand
break repair" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0036352 "histone
H2A-K15 ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-6013 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006302 GO:GO:0006511 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 GO:GO:0035518 HSSP:P38398
GO:GO:0045900 GO:GO:0035861 GO:GO:0070530 CTD:165918
HOGENOM:HOG000154156 OrthoDB:EOG4THVT2 GO:GO:0070535 GO:GO:0036351
GO:GO:0036352 EMBL:BC053301 IPI:IPI00487711 RefSeq:NP_956149.1
UniGene:Dr.7739 ProteinModelPortal:Q7T308 STRING:Q7T308
GeneID:334081 KEGG:dre:334081 eggNOG:NOG292819 InParanoid:Q7T308
NextBio:20810256 ArrayExpress:Q7T308 Uniprot:Q7T308
Length = 474
Score = 187 (70.9 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 33/93 (35%), Positives = 50/93 (53%)
Query: 26 SNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRR 85
S+ L +C VC I ++P+ LPC H C C D SN+ CP+CRKR+S W R
Sbjct: 15 SSGGLKRSDCVCPVCLEIFLEPVTLPCMHTFCKPCFLETVDKSNMCCPLCRKRVSTWARL 74
Query: 86 NKDFSLLIDENLWNQIQKYYKKEVDQKLFDQDD 118
N L++ LW +IQ + + ++++ DD
Sbjct: 75 NSRNKTLVNMELWRRIQDAFPSQCERRVQGIDD 107
>UNIPROTKB|F1MSN8 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9913 "Bos taurus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00906629 RefSeq:NP_001069757.2 UniGene:Bt.6014 GeneID:613812
KEGG:bta:613812 CTD:165918 NextBio:20898785 OMA:KSIFQMF
GeneTree:ENSGT00620000087973 EMBL:DAAA02001689
Ensembl:ENSBTAT00000017712 Uniprot:F1MSN8
Length = 573
Score = 187 (70.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 36/104 (34%), Positives = 57/104 (54%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C IL +P+ LPCNH +C C + + ++L CP CR+R+S W R + L++
Sbjct: 16 CQICVEILFEPVTLPCNHTLCKPCFESTVEKASLCCPFCRRRVSSWARYRSRTNSLVNME 75
Query: 97 LWNQIQKYYKKEVDQKLFDQDDGVWENYHQHISTYLLTAPTYLQ 140
LW IQK+Y KE + Q+ + +Q + LL+ P L+
Sbjct: 76 LWEIIQKHYPKECKLRASGQESKEIVDDYQPVR--LLSKPGELR 117
>UNIPROTKB|Q0IIM1 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0036352 "histone H2A-K15 ubiquitination"
evidence=ISS] [GO:0036351 "histone H2A-K13 ubiquitination"
evidence=ISS] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISS] [GO:0045190 "isotype switching" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0070530
"K63-linked polyubiquitin binding" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS] [GO:0045900
"negative regulation of translational elongation" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000151
"ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0070535
"histone H2A K63-linked ubiquitination" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0045739
"positive regulation of DNA repair" evidence=ISS] [GO:0010212
"response to ionizing radiation" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0010212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302 GO:GO:0006511
GO:GO:0045190 GO:GO:0004842 GO:GO:0042393 GO:GO:0045739
GO:GO:0000151 GO:GO:0035518 GO:GO:0045900 GO:GO:0035861
GO:GO:0070530 EMBL:AAFC03087522 EMBL:AAFC03087524 EMBL:BC122577
IPI:IPI00906629 IPI:IPI00924239 RefSeq:NP_001069757.2
UniGene:Bt.6014 STRING:Q0IIM1 GeneID:613812 KEGG:bta:613812
CTD:165918 eggNOG:NOG240923 HOGENOM:HOG000154156 HOVERGEN:HBG067220
InParanoid:Q0IIM1 OrthoDB:EOG4THVT2 NextBio:20898785 GO:GO:0070535
GO:GO:0036351 GO:GO:0036352 Uniprot:Q0IIM1
Length = 573
Score = 187 (70.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 36/104 (34%), Positives = 57/104 (54%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C IL +P+ LPCNH +C C + + ++L CP CR+R+S W R + L++
Sbjct: 16 CQICVEILFEPVTLPCNHTLCKPCFESTVEKASLCCPFCRRRVSSWARYRSRTNSLVNME 75
Query: 97 LWNQIQKYYKKEVDQKLFDQDDGVWENYHQHISTYLLTAPTYLQ 140
LW IQK+Y KE + Q+ + +Q + LL+ P L+
Sbjct: 76 LWEIIQKHYPKECKLRASGQESKEIVDDYQPVR--LLSKPGELR 117
>UNIPROTKB|G3X8F3 [details] [associations]
symbol:G3X8F3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00620000087973 EMBL:DAAA02070440
EMBL:DAAA02070441 Ensembl:ENSBTAT00000066229 Uniprot:G3X8F3
Length = 522
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 33/104 (31%), Positives = 56/104 (53%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C ILI+P+ LPCNH +C C + + +NL CP C +++ W + + L++
Sbjct: 16 CQICVEILIEPMTLPCNHTLCKACFKSTAEKTNLCCPSCHCQIAFWTWYHTQRNSLVNME 75
Query: 97 LWNQIQKYYKKEVDQKLFDQDDGVWENYHQHISTYLLTAPTYLQ 140
LW IQK++ +E ++ Q N Q + +LL+ P L+
Sbjct: 76 LWEIIQKHFPEECKLRVSGQQSEEIINDCQPV--HLLSQPGELR 117
>CGD|CAL0002668 [details] [associations]
symbol:TRY3 species:5476 "Candida albicans" [GO:0044011
"single-species biofilm formation on inanimate substrate"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IMP] [GO:1900189 "positive regulation of cell
adhesion involved in single-species biofilm formation"
evidence=IMP] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
CGD:CAL0002668 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006357 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010811
GO:GO:1900189 GO:GO:0044011 InterPro:IPR017907 EMBL:AACQ01000082
EMBL:AACQ01000081 InterPro:IPR004331 Pfam:PF03105 PROSITE:PS51382
eggNOG:COG5574 RefSeq:XP_715677.1 RefSeq:XP_715733.1
ProteinModelPortal:Q5A1M4 GeneID:3642652 GeneID:3642708
KEGG:cal:CaO19.1971 KEGG:cal:CaO19.9527 Uniprot:Q5A1M4
Length = 494
Score = 149 (57.5 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 31/94 (32%), Positives = 52/94 (55%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLL 92
D C +C I KPI+L C H C+ CL ++ + SCP+CRK +I + + L
Sbjct: 394 DDYSCPICMNIAYKPIRLSCGHLFCVRCLVKMKQDDKTSCPLCRKENAILYADSSNLDL- 452
Query: 93 IDENLWNQIQKYYKKEVDQKLFDQDDGVWENYHQ 126
E++ ++KY+ +EV +KL ++D E Y++
Sbjct: 453 --ESM-ELMKKYFPREVKEKLRERDK---ERYNE 480
Score = 33 (16.7 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 18 KMDNEDCNSNNTLT 31
+M N++ NS +TLT
Sbjct: 211 EMLNDELNSLDTLT 224
>UNIPROTKB|Q5A1M4 [details] [associations]
symbol:CaO19.1971 "Potential zinc RING finger protein"
species:237561 "Candida albicans SC5314" [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010811 "positive regulation of cell-substrate adhesion"
evidence=IMP] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] [GO:1900189 "positive regulation
of cell adhesion involved in single-species biofilm formation"
evidence=IMP] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
CGD:CAL0002668 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006357 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010811
GO:GO:1900189 GO:GO:0044011 InterPro:IPR017907 EMBL:AACQ01000082
EMBL:AACQ01000081 InterPro:IPR004331 Pfam:PF03105 PROSITE:PS51382
eggNOG:COG5574 RefSeq:XP_715677.1 RefSeq:XP_715733.1
ProteinModelPortal:Q5A1M4 GeneID:3642652 GeneID:3642708
KEGG:cal:CaO19.1971 KEGG:cal:CaO19.9527 Uniprot:Q5A1M4
Length = 494
Score = 149 (57.5 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 31/94 (32%), Positives = 52/94 (55%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLL 92
D C +C I KPI+L C H C+ CL ++ + SCP+CRK +I + + L
Sbjct: 394 DDYSCPICMNIAYKPIRLSCGHLFCVRCLVKMKQDDKTSCPLCRKENAILYADSSNLDL- 452
Query: 93 IDENLWNQIQKYYKKEVDQKLFDQDDGVWENYHQ 126
E++ ++KY+ +EV +KL ++D E Y++
Sbjct: 453 --ESM-ELMKKYFPREVKEKLRERDK---ERYNE 480
Score = 33 (16.7 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 18 KMDNEDCNSNNTLT 31
+M N++ NS +TLT
Sbjct: 211 EMLNDELNSLDTLT 224
>GENEDB_PFALCIPARUM|PF11_0244 [details] [associations]
symbol:PF11_0244 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AE014186 RefSeq:XP_001347915.1
ProteinModelPortal:Q8IID0 IntAct:Q8IID0 MINT:MINT-1640413
PRIDE:Q8IID0 EnsemblProtists:PF11_0244:mRNA GeneID:810791
KEGG:pfa:PF11_0244 EuPathDB:PlasmoDB:PF3D7_1123300
ProtClustDB:CLSZ2432487 Uniprot:Q8IID0
Length = 689
Score = 150 (57.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 29/97 (29%), Positives = 51/97 (52%)
Query: 15 VNSKMDNEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPM 74
V +K E C +N P V C +C +LI P+ +PC H+ C +C+++ + NL CP+
Sbjct: 204 VKNKKQKE-CINNEEKIPSEVECAICMKLLIVPVTIPCGHNFCRDCIEKAKEYKNL-CPL 261
Query: 75 CRKRLSIWLRRNKDFSLLIDENLWNQIQKYYKKEVDQ 111
CR + K+ +LL+ E + + Y K +++
Sbjct: 262 CRSNMG----DKKNINLLLGELIKQKYPLTYSKRLEE 294
>UNIPROTKB|Q8IID0 [details] [associations]
symbol:PF11_0244 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AE014186 RefSeq:XP_001347915.1
ProteinModelPortal:Q8IID0 IntAct:Q8IID0 MINT:MINT-1640413
PRIDE:Q8IID0 EnsemblProtists:PF11_0244:mRNA GeneID:810791
KEGG:pfa:PF11_0244 EuPathDB:PlasmoDB:PF3D7_1123300
ProtClustDB:CLSZ2432487 Uniprot:Q8IID0
Length = 689
Score = 150 (57.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 29/97 (29%), Positives = 51/97 (52%)
Query: 15 VNSKMDNEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPM 74
V +K E C +N P V C +C +LI P+ +PC H+ C +C+++ + NL CP+
Sbjct: 204 VKNKKQKE-CINNEEKIPSEVECAICMKLLIVPVTIPCGHNFCRDCIEKAKEYKNL-CPL 261
Query: 75 CRKRLSIWLRRNKDFSLLIDENLWNQIQKYYKKEVDQ 111
CR + K+ +LL+ E + + Y K +++
Sbjct: 262 CRSNMG----DKKNINLLLGELIKQKYPLTYSKRLEE 294
>ZFIN|ZDB-GENE-030131-8303 [details] [associations]
symbol:si:ch1073-440b2.1 "si:ch1073-440b2.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR007110 InterPro:IPR011990
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50835 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-030131-8303 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
EMBL:CU459183 EMBL:CU915565 IPI:IPI00836275
Ensembl:ENSDART00000129204 Uniprot:E7EYP4
Length = 488
Score = 146 (56.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 29/100 (29%), Positives = 55/100 (55%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H CL+CL+R D+ N +CP+C++ LS +L L+ E
Sbjct: 195 CSLCMRLFYEPVTTPCGHTFCLKCLERCLDH-NPNCPLCKENLSEYLATRAYCKTLLIEE 253
Query: 97 LWNQIQKYYKKEVDQ--KLFDQDDGVWENYHQHISTYLLT 134
L +Q+Y E+ + K+++++ N +Q + ++ T
Sbjct: 254 L---LQQYLSDELTERRKVYEEEMKELSNLNQEVPIFVCT 290
>UNIPROTKB|B3KUN7 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 Pfam:PF02190 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
EMBL:CH471161 HOGENOM:HOG000060199 HOVERGEN:HBG081924 EMBL:AL772284
UniGene:Hs.144266 HGNC:HGNC:21152 EMBL:AK097641 IPI:IPI00902452
SMR:B3KUN7 Ensembl:ENST00000422289 UCSC:uc004eqz.3 Uniprot:B3KUN7
Length = 503
Score = 140 (54.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 30/100 (30%), Positives = 54/100 (54%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H CL+CL+R D+ N CP+C+ LS L K +I E
Sbjct: 211 CALCMRLFYEPVTTPCGHTFCLKCLERCLDH-NAKCPLCKDGLSQCLASRKYSKNVIMEE 269
Query: 97 LWNQIQKYYKKEVDQ--KLFDQDDGVWENYHQHISTYLLT 134
L I K+ +E+ + KL++++ N ++++ ++ T
Sbjct: 270 L---IAKFLPEELKERRKLYEEEMEELSNLNKNVPIFVCT 306
>UNIPROTKB|H0Y7Q8 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 EMBL:AL772284 HGNC:HGNC:21152
ProteinModelPortal:H0Y7Q8 Ensembl:ENST00000439603 Uniprot:H0Y7Q8
Length = 525
Score = 140 (54.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 30/100 (30%), Positives = 54/100 (54%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H CL+CL+R D+ N CP+C+ LS L K +I E
Sbjct: 233 CALCMRLFYEPVTTPCGHTFCLKCLERCLDH-NAKCPLCKDGLSQCLASRKYSKNVIMEE 291
Query: 97 LWNQIQKYYKKEVDQ--KLFDQDDGVWENYHQHISTYLLT 134
L I K+ +E+ + KL++++ N ++++ ++ T
Sbjct: 292 L---IAKFLPEELKERRKLYEEEMEELSNLNKNVPIFVCT 328
>ZFIN|ZDB-GENE-081104-397 [details] [associations]
symbol:lonrf1l "LON peptidase N-terminal domain and
ring finger 1, like" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 Pfam:PF02190 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-081104-397
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GO:GO:0004176 GeneTree:ENSGT00440000033329 EMBL:CR786572
EMBL:CU468725 EMBL:CU856174 IPI:IPI00996938 RefSeq:XP_003199128.1
UniGene:Dr.116034 Ensembl:ENSDART00000144516 GeneID:100317496
KEGG:dre:100317496 CTD:100317496 Uniprot:F1QJQ0
Length = 751
Score = 129 (50.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 28 NTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNK 87
N L P+ C +C + +P+ PC H C CL+R D+ N CP+C++ L +L K
Sbjct: 448 NLLDPNDFECSLCMRLFYQPVTTPCGHTFCTNCLERCLDH-NPQCPLCKESLKEYLAFRK 506
Query: 88 DFSLLIDENLWNQIQKYYKKEVDQKL 113
+ + L N I+++ KE +++
Sbjct: 507 ---YTVTQVLDNIIKQHLPKEHSERV 529
Score = 36 (17.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 126 QHISTYLLTAPT 137
QHI TYL P+
Sbjct: 739 QHILTYLQNLPS 750
>UNIPROTKB|E1B964 [details] [associations]
symbol:LOC100849413 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
CTD:91694 OMA:GHSYCRR GeneTree:ENSGT00440000033329
EMBL:DAAA02060368 IPI:IPI00703913 RefSeq:XP_002698738.1
ProteinModelPortal:E1B964 Ensembl:ENSBTAT00000012816 GeneID:504489
KEGG:bta:504489 NextBio:20866687 Uniprot:E1B964
Length = 638
Score = 124 (48.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 25/100 (25%), Positives = 51/100 (51%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H C CL+R D++ CP+C++ L +L D + +
Sbjct: 344 CSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPY-CPLCKESLKEYLA---DRRYCVTQL 399
Query: 97 LWNQIQKYYKKEVDQ--KLFDQDDGVWENYHQHISTYLLT 134
L + I KY E+ + K++D++ + +++ ++ T
Sbjct: 400 LEDLIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCT 439
Score = 39 (18.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 22 EDCNSNNTLTPDSVLCLVCQGILIK 46
EDC + P LC+ +G+L+K
Sbjct: 270 EDCLKRVSSEPS--LCIQGKGVLLK 292
>UNIPROTKB|F1NNQ7 [details] [associations]
symbol:Gga.54568 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:VKLSALM GeneTree:ENSGT00440000033329 EMBL:AADN02013631
EMBL:AADN02013632 EMBL:AADN02013633 IPI:IPI00592342
Ensembl:ENSGALT00000014392 Uniprot:F1NNQ7
Length = 632
Score = 139 (54.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 30/109 (27%), Positives = 59/109 (54%)
Query: 29 TLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIW-LRRNK 87
++ P + C +C + +P+ PC H CL+CL+R D+ N CP+C++ LS L K
Sbjct: 330 SVDPSDLDCSLCMRLFYEPVTTPCGHTFCLKCLERCLDH-NPKCPLCKEGLSEQCLAMRK 388
Query: 88 DFSLLIDENLWNQIQKYYKKEVDQ--KLFDQDDGVWENYHQHISTYLLT 134
++ E L I KY +E+ + K+++++ N ++++ ++ T
Sbjct: 389 YCKTVLMEEL---IAKYLPEELTERRKIYEEEIAELSNLNKNVPIFVCT 434
Score = 105 (42.0 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRK 77
D C CQG L +P+ LPC H C +CL+R D + + C +CR+
Sbjct: 92 DGCRCRKCQGFLFEPVSLPCGHTFCKKCLER--DRAAATRCVLCRE 135
>UNIPROTKB|Q496Y0 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
HSSP:Q8IZP6 GO:GO:0004176 eggNOG:COG2802 HOGENOM:HOG000060199
HOVERGEN:HBG081924 EMBL:AK026265 EMBL:AK091777 EMBL:AL772284
EMBL:BC099847 EMBL:BC100671 EMBL:BC103491 IPI:IPI00300753
IPI:IPI00640460 IPI:IPI00827481 RefSeq:NP_001027026.1
RefSeq:NP_079054.3 UniGene:Hs.144266 ProteinModelPortal:Q496Y0
SMR:Q496Y0 IntAct:Q496Y0 PhosphoSite:Q496Y0 DMDM:121949074
PRIDE:Q496Y0 Ensembl:ENST00000304778 Ensembl:ENST00000365713
Ensembl:ENST00000371628 Ensembl:ENST00000481285 GeneID:79836
KEGG:hsa:79836 UCSC:uc004eqw.3 UCSC:uc004eqx.3 CTD:79836
GeneCards:GC0XP118108 HGNC:HGNC:21152 neXtProt:NX_Q496Y0
PharmGKB:PA134900980 InParanoid:Q496Y0 OMA:VKLSALM PhylomeDB:Q496Y0
GenomeRNAi:79836 NextBio:69492 ArrayExpress:Q496Y0 Bgee:Q496Y0
CleanEx:HS_LONRF3 Genevestigator:Q496Y0 Uniprot:Q496Y0
Length = 759
Score = 140 (54.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 30/100 (30%), Positives = 54/100 (54%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H CL+CL+R D+ N CP+C+ LS L K +I E
Sbjct: 467 CALCMRLFYEPVTTPCGHTFCLKCLERCLDH-NAKCPLCKDGLSQCLASRKYSKNVIMEE 525
Query: 97 LWNQIQKYYKKEVDQ--KLFDQDDGVWENYHQHISTYLLT 134
L I K+ +E+ + KL++++ N ++++ ++ T
Sbjct: 526 L---IAKFLPEELKERRKLYEEEMEELSNLNKNVPIFVCT 562
>UNIPROTKB|F1P5G6 [details] [associations]
symbol:LONRF2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:KVMCEVL GeneTree:ENSGT00440000033329 EMBL:AADN02017710
EMBL:AADN02017711 EMBL:AADN02017712 IPI:IPI00585952
Ensembl:ENSGALT00000027073 Uniprot:F1P5G6
Length = 753
Score = 139 (54.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 37/142 (26%), Positives = 73/142 (51%)
Query: 8 RDVSLLLVNSKMDNEDCN---SNNTLT----PDSVL------CLVCQGILIKPIKLPCNH 54
RD+ L V SK+ +D + N +T P +++ C +C + +P+ PC H
Sbjct: 418 RDIQSLDVPSKIPKKDADVLPENAVVTSSEIPTTLVDASDFECSLCMRLFYEPVTTPCGH 477
Query: 55 HVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDENLWNQIQKYYKKEVDQ--K 112
CL+CL+R D+ N CP+C+++LS +L ++ E L I +Y +E+ + K
Sbjct: 478 TFCLKCLERCLDH-NPHCPLCKEKLSEFLASRTYKKTVLTEEL---IVRYLPEELSERKK 533
Query: 113 LFDQDDGVWENYHQHISTYLLT 134
+++++ N ++ + ++ T
Sbjct: 534 VYEEEMKELSNLNKDVPIFVCT 555
>UNIPROTKB|F1PPT8 [details] [associations]
symbol:LONRF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
EMBL:AAEX03007441 OMA:ELANTRW Ensembl:ENSCAFT00000003510
Uniprot:F1PPT8
Length = 820
Score = 138 (53.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 28/84 (33%), Positives = 53/84 (63%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLR-RNKDFSLLIDE 95
C +C +L +P+ PC H CL+CL+R D++ CP+C+++LS L RN + ++L +E
Sbjct: 459 CALCMRLLFEPVTTPCGHTFCLKCLERCLDHAP-HCPLCKEKLSELLASRNFNITILAEE 517
Query: 96 NLWNQIQKYYKKEV-DQK-LFDQD 117
++ +Y E+ D+K ++D++
Sbjct: 518 LIF----RYLSDELSDRKRIYDEE 537
>UNIPROTKB|Q1L5Z9 [details] [associations]
symbol:LONRF2 "LON peptidase N-terminal domain and RING
finger protein 2" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 EMBL:AC012493 GO:GO:0004176 eggNOG:COG2802
HOGENOM:HOG000060199 HOVERGEN:HBG081924 EMBL:DQ020495 EMBL:AK127206
EMBL:AC104782 EMBL:BC101664 EMBL:BC101662 IPI:IPI00394812
IPI:IPI00827614 RefSeq:NP_940863.3 UniGene:Hs.21380
ProteinModelPortal:Q1L5Z9 SMR:Q1L5Z9 IntAct:Q1L5Z9 STRING:Q1L5Z9
PhosphoSite:Q1L5Z9 DMDM:126215737 PaxDb:Q1L5Z9 PRIDE:Q1L5Z9
Ensembl:ENST00000393437 Ensembl:ENST00000409647 GeneID:164832
KEGG:hsa:164832 UCSC:uc002tal.4 CTD:164832 GeneCards:GC02M100889
H-InvDB:HIX0024130 HGNC:HGNC:24788 neXtProt:NX_Q1L5Z9
PharmGKB:PA142671540 InParanoid:Q1L5Z9 OMA:KVMCEVL
OrthoDB:EOG4BK538 ChiTaRS:LONRF2 GenomeRNAi:164832 NextBio:88502
Bgee:Q1L5Z9 CleanEx:HS_LONRF2 Genevestigator:Q1L5Z9 Uniprot:Q1L5Z9
Length = 754
Score = 137 (53.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 37/137 (27%), Positives = 72/137 (52%)
Query: 8 RDVSLLLVNSKMDNEDCNSNNTLTPD--SVLCLVCQGILIKPIKLPCNHHVCLECLQRIC 65
+D+SL + N + + L+ D C +C +L +P+ PC H CL+CL+R
Sbjct: 422 KDLSL----QRSPNSETEESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCL 477
Query: 66 DNSNLSCPMCRKRLSIWLR-RNKDFSLLIDENLWNQIQKYYKKEV-DQK-LFDQDDGVWE 122
D++ CP+C+ +LS L RN + ++L +E ++ +Y E+ D+K ++D++
Sbjct: 478 DHAP-HCPLCKDKLSELLASRNFNITVLAEELIF----RYLPDELSDRKRIYDEEMSELS 532
Query: 123 NYHQHISTYL--LTAPT 137
N + + ++ + PT
Sbjct: 533 NLTRDVPIFVCAMAFPT 549
>UNIPROTKB|F1PSB6 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR013105 Pfam:PF07719
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:VKLSALM GeneTree:ENSGT00440000033329 EMBL:AAEX03026821
Ensembl:ENSCAFT00000029170 Uniprot:F1PSB6
Length = 765
Score = 137 (53.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H CL+CL+R D+ N CP+C+ LS L K +I E
Sbjct: 473 CALCMRLFYEPVTTPCGHTFCLKCLERCLDH-NAKCPLCKDGLSQCLASRKYSKNVIMEE 531
Query: 97 LWNQIQKYYKKEVDQK--LFDQDDGVWENYHQHISTYLLT 134
L I K+ +E+ ++ L++++ N ++++ ++ T
Sbjct: 532 L---IAKFLPEELKERRRLYEEEMEELSNLNKNVPIFVCT 568
>UNIPROTKB|F1STF3 [details] [associations]
symbol:LONRF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000033329 EMBL:CU856636
Ensembl:ENSSSCT00000008954 Uniprot:F1STF3
Length = 545
Score = 135 (52.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 29/84 (34%), Positives = 51/84 (60%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLR-RNKDFSLLIDE 95
C +C +L +P+ PC H CL+CL+R D++ CP+C+++LS L RN + + L +E
Sbjct: 459 CALCMRLLFEPVTTPCGHTFCLKCLERCLDHAP-HCPLCKEKLSELLASRNFNITTLAEE 517
Query: 96 NLWNQIQKYYKKEV-DQK-LFDQD 117
I +Y E+ D+K ++D++
Sbjct: 518 ----LILRYLSDELSDRKRIYDEE 537
>UNIPROTKB|I3LHE2 [details] [associations]
symbol:LONRF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000033329 OMA:ELANTRW
EMBL:CU856636 Ensembl:ENSSSCT00000023061 Uniprot:I3LHE2
Length = 563
Score = 135 (52.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 29/84 (34%), Positives = 51/84 (60%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLR-RNKDFSLLIDE 95
C +C +L +P+ PC H CL+CL+R D++ CP+C+++LS L RN + + L +E
Sbjct: 474 CALCMRLLFEPVTTPCGHTFCLKCLERCLDHAP-HCPLCKEKLSELLASRNFNITTLAEE 532
Query: 96 NLWNQIQKYYKKEV-DQK-LFDQD 117
I +Y E+ D+K ++D++
Sbjct: 533 ----LILRYLSDELSDRKRIYDEE 552
>UNIPROTKB|K7GS78 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00184 Prosite:PS00518 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR015947
SUPFAM:SSF88697 InterPro:IPR017907 GeneTree:ENSGT00440000033329
EMBL:CU928929 Ensembl:ENSSSCT00000036557 Uniprot:K7GS78
Length = 694
Score = 136 (52.9 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H CL+CL+R D+ N CP+C+ LS L K +I E
Sbjct: 402 CSLCMRLFYEPVTTPCGHTFCLKCLERCLDH-NAKCPLCKDGLSQCLASRKYSKNVIMEE 460
Query: 97 LWNQIQKYYKKEVDQK--LFDQDDGVWENYHQHISTYLLT 134
L I K+ +E+ ++ L++++ N ++++ ++ T
Sbjct: 461 L---IAKFLPEELKERRRLYEEEMEELSNLNKNVPIFVCT 497
>UNIPROTKB|K7GKX2 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GeneTree:ENSGT00440000033329 EMBL:CU928929 RefSeq:XP_003360480.1
Ensembl:ENSSSCT00000035094 GeneID:100517799 Uniprot:K7GKX2
Length = 711
Score = 136 (52.9 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H CL+CL+R D+ N CP+C+ LS L K +I E
Sbjct: 419 CSLCMRLFYEPVTTPCGHTFCLKCLERCLDH-NAKCPLCKDGLSQCLASRKYSKNVIMEE 477
Query: 97 LWNQIQKYYKKEVDQK--LFDQDDGVWENYHQHISTYLLT 134
L I K+ +E+ ++ L++++ N ++++ ++ T
Sbjct: 478 L---IAKFLPEELKERRRLYEEEMEELSNLNKNVPIFVCT 514
>UNIPROTKB|K7GLC4 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR013105 Pfam:PF07719
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GeneTree:ENSGT00440000033329 EMBL:CU928929 GeneID:100517799
RefSeq:XP_003135396.2 Ensembl:ENSSSCT00000033278 Uniprot:K7GLC4
Length = 752
Score = 136 (52.9 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H CL+CL+R D+ N CP+C+ LS L K +I E
Sbjct: 460 CSLCMRLFYEPVTTPCGHTFCLKCLERCLDH-NAKCPLCKDGLSQCLASRKYSKNVIMEE 518
Query: 97 LWNQIQKYYKKEVDQK--LFDQDDGVWENYHQHISTYLLT 134
L I K+ +E+ ++ L++++ N ++++ ++ T
Sbjct: 519 L---IAKFLPEELKERRRLYEEEMEELSNLNKNVPIFVCT 555
>UNIPROTKB|G3X6C1 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 CTD:79836 OMA:VKLSALM
GeneTree:ENSGT00440000033329 EMBL:DAAA02067124
RefSeq:NP_001178063.1 UniGene:Bt.92361 ProteinModelPortal:G3X6C1
Ensembl:ENSBTAT00000003384 GeneID:508189 KEGG:bta:508189
NextBio:20868400 Uniprot:G3X6C1
Length = 759
Score = 136 (52.9 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H CL+CL+R D+ N CP+C+ LS L K +I E
Sbjct: 467 CSLCMRLFYEPVTTPCGHTFCLKCLERCLDH-NAKCPLCKDGLSQCLASRKYSKNVIMEE 525
Query: 97 LWNQIQKYYKKEVDQK--LFDQDDGVWENYHQHISTYLLT 134
L I K+ +E+ ++ L++++ N ++++ ++ T
Sbjct: 526 L---IAKFLPEELKERRRLYEEEMEELSNLNKNVPIFVCT 562
>UNIPROTKB|F1RU80 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 OMA:VKLSALM
GeneTree:ENSGT00440000033329 EMBL:CU928929
Ensembl:ENSSSCT00000013812 Uniprot:F1RU80
Length = 788
Score = 136 (52.9 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H CL+CL+R D+ N CP+C+ LS L K +I E
Sbjct: 460 CSLCMRLFYEPVTTPCGHTFCLKCLERCLDH-NAKCPLCKDGLSQCLASRKYSKNVIMEE 518
Query: 97 LWNQIQKYYKKEVDQK--LFDQDDGVWENYHQHISTYLLT 134
L I K+ +E+ ++ L++++ N ++++ ++ T
Sbjct: 519 L---IAKFLPEELKERRRLYEEEMEELSNLNKNVPIFVCT 555
>UNIPROTKB|E2RD88 [details] [associations]
symbol:RNF135 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00650000093365
EMBL:AAEX03006644 Ensembl:ENSCAFT00000029317 OMA:NECAPRE
Uniprot:E2RD88
Length = 436
Score = 117 (46.2 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRI----CDNSNLSCPMCRKRLSI--WL 83
L D + C++C G+L P LPC H C +CL+ + C SCP CR + L
Sbjct: 14 LAEDDLGCIICHGLLAWPATLPCGHSFCRDCLKGLWAAGCAGPPRSCPTCRASAAEPRQL 73
Query: 84 RRNKDFSLLIDE 95
R+N L+D+
Sbjct: 74 RKNTMLQELVDK 85
Score = 35 (17.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 96 NLWNQIQKYYKKEV-DQKLFDQDDGVWENYHQHIS 129
+LWN +++ +V + F WE QH S
Sbjct: 294 HLWNH-ERFVTCQVLCSQAFSSGQQYWEVDTQHCS 327
>RGD|1562137 [details] [associations]
symbol:Lonrf2 "LON peptidase N-terminal domain and ring finger
2" species:10116 "Rattus norvegicus" [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 InterPro:IPR011990
Pfam:PF02190 PROSITE:PS50089 SMART:SM00184 RGD:1562137
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:KVMCEVL OrthoDB:EOG4BK538 GeneTree:ENSGT00440000033329
IPI:IPI00362200 Ensembl:ENSRNOT00000033964 UCSC:RGD:1562137
Uniprot:D3ZX48
Length = 517
Score = 132 (51.5 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 28/84 (33%), Positives = 52/84 (61%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLR-RNKDFSLLIDE 95
C +C +L +P+ PC H CL+CL+R D++ CP+C+ +LS L RN + ++L +E
Sbjct: 212 CALCMRLLFEPVTTPCGHTFCLKCLERCLDHAP-HCPLCKDKLSELLATRNFNVTVLTEE 270
Query: 96 NLWNQIQKYYKKEV-DQK-LFDQD 117
++ +Y E+ D+K ++D++
Sbjct: 271 LIF----RYLPDELSDRKRVYDEE 290
>WB|WBGene00011366 [details] [associations]
symbol:T02C1.2 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 EMBL:Z19156
RefSeq:NP_001022740.2 ProteinModelPortal:Q7YWU1 SMR:Q7YWU1
EnsemblMetazoa:T02C1.2 GeneID:176306 KEGG:cel:CELE_T02C1.2
UCSC:T02C1.2 CTD:176306 WormBase:T02C1.2 eggNOG:nemNOG04237
HOGENOM:HOG000019178 InParanoid:Q7YWU1 OMA:CTICYDI NextBio:892014
Uniprot:Q7YWU1
Length = 275
Score = 126 (49.4 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 25 NSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLR 84
NSN+ L D VLC +C I+++P L C H C +C+ + C CP C++ + W R
Sbjct: 89 NSND-LDEDDVLCTICYDIIVEPHTLRCQHSFCKKCIDQ-CLPLTRKCPSCQQWV-YWSR 145
Query: 85 RNKDF 89
+NK F
Sbjct: 146 KNKIF 150
>MGI|MGI:1914754 [details] [associations]
symbol:Rnf151 "ring finger protein 151" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS51081
SMART:SM00184 MGI:MGI:1914754 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
GO:GO:0007283 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HSSP:Q9H0F5 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
CTD:146310 eggNOG:NOG319521 GeneTree:ENSGT00530000063647
HOGENOM:HOG000154154 HOVERGEN:HBG087956 OMA:PCCRKEV
OrthoDB:EOG4V6ZHF EMBL:AK005854 EMBL:BC049562 IPI:IPI00131917
RefSeq:NP_080481.1 UniGene:Mm.46159 ProteinModelPortal:Q9CQ29
SMR:Q9CQ29 STRING:Q9CQ29 PhosphoSite:Q9CQ29 PRIDE:Q9CQ29
Ensembl:ENSMUST00000008626 GeneID:67504 KEGG:mmu:67504
UCSC:uc008axw.1 InParanoid:Q9CQ29 NextBio:324764 Bgee:Q9CQ29
CleanEx:MM_RNF151 Genevestigator:Q9CQ29
GermOnline:ENSMUSG00000008482 Uniprot:Q9CQ29
Length = 239
Score = 121 (47.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 32 PD-SVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLS 80
PD LC VC G+L +P +LPC+H C +C+ R N +CP CRK ++
Sbjct: 14 PDCKFLCSVCHGVLKRPTRLPCSHIFCKKCIFRWLARQN-TCPCCRKEVT 62
>UNIPROTKB|B0V1M0 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 UniGene:Hs.493275
HGNC:HGNC:16289 eggNOG:NOG310139 OrthoDB:EOG4K0QNJ EMBL:CR925727
IPI:IPI00892854 SMR:B0V1M0 Ensembl:ENST00000422484 Uniprot:B0V1M0
Length = 248
Score = 121 (47.7 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN--LSCPMCRKRLSIWLRRNK-DF 89
+ V+C +C IL KP+ + C H+ CL+C+ +I + S CP+C+ + R+N F
Sbjct: 12 EEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSV----RKNAIRF 67
Query: 90 SLLIDENLWNQIQKYYKKEVDQK 112
+ L+ NL +IQ EV K
Sbjct: 68 NSLL-RNLVEKIQALQASEVQSK 89
>UNIPROTKB|Q2TBT8 [details] [associations]
symbol:RNF151 "RING finger protein 151" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS51081
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 EMBL:BC109671
IPI:IPI00695483 RefSeq:NP_001070506.1 UniGene:Bt.54154
ProteinModelPortal:Q2TBT8 PRIDE:Q2TBT8 Ensembl:ENSBTAT00000047302
GeneID:767973 KEGG:bta:767973 CTD:146310 eggNOG:NOG319521
GeneTree:ENSGT00530000063647 HOGENOM:HOG000154154
HOVERGEN:HBG087956 InParanoid:Q2TBT8 OMA:PCCRKEV OrthoDB:EOG4V6ZHF
NextBio:20918328 Uniprot:Q2TBT8
Length = 240
Score = 120 (47.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 32 PD-SVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
PD + LC VC G+L +P++LPC+H C +C+ R +CP CRK +
Sbjct: 14 PDCNFLCSVCHGVLKRPVRLPCSHIFCKKCILRWLARQK-TCPCCRKEV 61
>UNIPROTKB|F1Q031 [details] [associations]
symbol:RNF151 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS51081 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00530000063647 OMA:PCCRKEV EMBL:AAEX03004635
Ensembl:ENSCAFT00000030950 Uniprot:F1Q031
Length = 244
Score = 120 (47.3 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 32 PD-SVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
PD + LC VC G+L +P++LPC+H C +C+ R +CP CRK +
Sbjct: 14 PDCNFLCSVCHGVLKRPVRLPCSHIFCKKCILRWLARQK-TCPCCRKEV 61
>RGD|1309302 [details] [associations]
symbol:Rnf151 "ring finger protein 151" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS51081 SMART:SM00184 RGD:1309302 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:CH473948 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 CTD:146310
GeneTree:ENSGT00530000063647 OrthoDB:EOG4V6ZHF IPI:IPI00368706
RefSeq:NP_001100457.1 UniGene:Rn.89276 Ensembl:ENSRNOT00000018964
GeneID:302977 KEGG:rno:302977 UCSC:RGD:1309302 NextBio:650458
Uniprot:D3ZJQ8
Length = 238
Score = 119 (46.9 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 32 PD-SVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
PD + LC VC G+L +P++LPC+H C +C+ + N +CP CRK +
Sbjct: 14 PDCNFLCSVCHGVLKRPMRLPCSHIFCKKCIFQWLARQN-TCPCCRKEV 61
>UNIPROTKB|H7C5V9 [details] [associations]
symbol:LONRF1 "LON peptidase N-terminal domain and RING
finger protein 1" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111 Pfam:PF02190
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
EMBL:AC123777 HGNC:HGNC:26302 Ensembl:ENST00000524526 Bgee:H7C5V9
Uniprot:H7C5V9
Length = 376
Score = 123 (48.4 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 25/100 (25%), Positives = 50/100 (50%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H C CL+R D++ CP+C++ L +L D + +
Sbjct: 82 CSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPY-CPLCKESLKEYLA---DRRYCVTQL 137
Query: 97 LWNQIQKYYKKEVDQ--KLFDQDDGVWENYHQHISTYLLT 134
L I KY E+ + K++D++ + +++ ++ T
Sbjct: 138 LEELIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCT 177
>UNIPROTKB|I3L5Q2 [details] [associations]
symbol:RNF151 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00530000063647 OMA:PCCRKEV Ensembl:ENSSSCT00000022774
Uniprot:I3L5Q2
Length = 232
Score = 118 (46.6 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 32 PD-SVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
PD + LC VC G+L KP++LPC+H C +C+ +CP CRK +
Sbjct: 10 PDCNFLCSVCHGVLKKPVRLPCSHIFCKKCILHWLARQK-TCPCCRKEV 57
>ZFIN|ZDB-GENE-071004-80 [details] [associations]
symbol:zgc:171260 "zgc:171260" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-071004-80
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
eggNOG:NOG285726 HOGENOM:HOG000124586 OrthoDB:EOG4QNMW8
EMBL:BC152517 IPI:IPI00998622 RefSeq:NP_001103307.1
UniGene:Dr.152815 ProteinModelPortal:A7MD79 GeneID:100126109
KEGG:dre:100126109 HOVERGEN:HBG106887 NextBio:20788971
Uniprot:A7MD79
Length = 452
Score = 123 (48.4 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 30/86 (34%), Positives = 46/86 (53%)
Query: 28 NTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRKRLSIWLRRN 86
++LT + C VCQ I P+ L C+H C ECLQ+ + N CP+CR+R S
Sbjct: 2 SSLTEYDLTCPVCQDIFKTPVLLSCSHSFCKECLQQFWRSKNTQECPVCRRRSS------ 55
Query: 87 KDFSLLIDENLWNQIQKYYKKEVDQK 112
KD+ I+ L N + Y K+ +++
Sbjct: 56 KDYPP-INLALKNLCESYLKERNERR 80
>MGI|MGI:1921615 [details] [associations]
symbol:Lonrf3 "LON peptidase N-terminal domain and ring
finger 3" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 MGI:MGI:1921615 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 eggNOG:COG2802
HOGENOM:HOG000060199 HOVERGEN:HBG081924 CTD:79836 EMBL:AK016522
EMBL:AL450395 EMBL:BC120688 EMBL:BC120690 IPI:IPI00137246
RefSeq:NP_083170.1 UniGene:Mm.327654 HSSP:Q13049
ProteinModelPortal:Q9D4H7 SMR:Q9D4H7 PhosphoSite:Q9D4H7
PRIDE:Q9D4H7 Ensembl:ENSMUST00000016383 GeneID:74365 KEGG:mmu:74365
UCSC:uc009sxm.1 GeneTree:ENSGT00440000033329 InParanoid:Q9D4H7
OrthoDB:EOG4RXXZM NextBio:340559 Bgee:Q9D4H7 CleanEx:MM_LONRF3
Genevestigator:Q9D4H7 Uniprot:Q9D4H7
Length = 753
Score = 125 (49.1 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 24/99 (24%), Positives = 55/99 (55%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNK-DFSLLIDE 95
C +C + +P+ PC H CL+CL+R D+ N CP+C+ L L K +++++E
Sbjct: 461 CSLCMRLFYEPVTTPCGHTFCLKCLERCLDH-NAKCPLCKDVLLQCLPSRKYSKNVILEE 519
Query: 96 NLWNQIQKYYKKEVDQKLFDQDDGVWENYHQHISTYLLT 134
+ + + +K+ ++L++++ N ++++ ++ T
Sbjct: 520 LIATFLPEEFKER--KRLYEEEMEELSNLNKNVPIFVCT 556
>MGI|MGI:106657 [details] [associations]
symbol:Trim21 "tripartite motif-containing 21" species:10090
"Mus musculus" [GO:0000209 "protein polyubiquitination"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006513 "protein monoubiquitination"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0045787 "positive regulation of cell cycle"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=ISO] [GO:0070206
"protein trimerization" evidence=ISO] [GO:0090086 "negative
regulation of protein deubiquitination" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:106657 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0007049
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0032088
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0051865
GO:GO:0045787 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 GO:GO:0031648 GO:GO:0006513 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0090086
eggNOG:NOG276395 HOVERGEN:HBG001357 OrthoDB:EOG4KWJSP EMBL:L27990
IPI:IPI00331738 UniGene:Mm.321227 PDB:2VOK PDB:2VOL PDBsum:2VOK
PDBsum:2VOL ProteinModelPortal:Q62191 SMR:Q62191 STRING:Q62191
PhosphoSite:Q62191 PRIDE:Q62191 HOGENOM:HOG000234134
InParanoid:Q62191 EvolutionaryTrace:Q62191 CleanEx:MM_TRIM21
Genevestigator:Q62191 GermOnline:ENSMUSG00000030966 Uniprot:Q62191
Length = 470
Score = 122 (48.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIW-LRRNKDFSL 91
+ V C +C +++P+ + C H C EC+ + N SCP CR++ + LR N+ +
Sbjct: 16 EEVTCSICLDPMVEPMSIECGHCFCKECIFEVGKNGGSSCPECRQQFLLRNLRPNRHIAN 75
Query: 92 LIDENLWNQIQKYYKKEVDQ 111
++ ENL QI + KK +
Sbjct: 76 MV-ENL-KQIAQNTKKSTQE 93
>MGI|MGI:1919206 [details] [associations]
symbol:Rnf135 "ring finger protein 135" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=ISO] [GO:0043021 "ribonucleoprotein complex binding"
evidence=ISO] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0045088 "regulation of innate immune response" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1919206 Prosite:PS00518 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0045087 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0043021 InterPro:IPR017907 GO:GO:0045088 InterPro:IPR001870
PROSITE:PS50188 HSSP:P38398 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GO:GO:0032728 EMBL:AL591426 CTD:84282
eggNOG:NOG308427 HOVERGEN:HBG056606 KO:K16272 OMA:WLYGLHP
OrthoDB:EOG49S66X EMBL:AK002781 EMBL:AK010429 EMBL:AK150921
EMBL:AK152096 EMBL:BC025209 EMBL:BC096385 EMBL:BC132307
IPI:IPI00109006 IPI:IPI00109487 RefSeq:NP_082295.1 UniGene:Mm.22985
ProteinModelPortal:Q9CWS1 SMR:Q9CWS1 IntAct:Q9CWS1 MINT:MINT-218463
STRING:Q9CWS1 PRIDE:Q9CWS1 Ensembl:ENSMUST00000017839 GeneID:71956
KEGG:mmu:71956 GeneTree:ENSGT00650000093365 HOGENOM:HOG000060145
InParanoid:Q9CWS1 NextBio:335048 Bgee:Q9CWS1 CleanEx:MM_RNF135
Genevestigator:Q9CWS1 Uniprot:Q9CWS1
Length = 417
Score = 121 (47.7 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 24 CNSNNT---LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRI-------CDNSNLSCP 73
C+ N L+ D + C++CQG+L +P LPC H CL CL + D +CP
Sbjct: 5 CSGNAVPVWLSEDDLSCIICQGLLDQPTTLPCGHSFCLRCLHDLWVSKRGAVDGCPWACP 64
Query: 74 MCRK 77
+CRK
Sbjct: 65 ICRK 68
>UNIPROTKB|A6NI17 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX088647 HOGENOM:HOG000234133 EMBL:BX005441
EMBL:CR759838 HGNC:HGNC:16289 eggNOG:NOG310139 HOVERGEN:HBG083771
EMBL:BX897730 EMBL:CR759801 EMBL:CT009552 IPI:IPI00744105
SMR:A6NI17 Ensembl:ENST00000546863 Ensembl:ENST00000550119
Ensembl:ENST00000550679 Uniprot:A6NI17
Length = 425
Score = 121 (47.7 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN--LSCPMCRKRLSIWLRRNK-DF 89
+ V+C +C IL KP+ + C H+ CL+C+ +I + S CP+C+ + R+N F
Sbjct: 12 EEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSV----RKNAIRF 67
Query: 90 SLLIDENLWNQIQKYYKKEVDQK 112
+ L+ NL +IQ EV K
Sbjct: 68 NSLL-RNLVEKIQALQASEVQSK 89
>UNIPROTKB|C9JJD5 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX322644 HGNC:HGNC:16289 eggNOG:NOG310139
IPI:IPI01022309 ProteinModelPortal:C9JJD5 SMR:C9JJD5
Ensembl:ENST00000550348 Uniprot:C9JJD5
Length = 425
Score = 121 (47.7 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN--LSCPMCRKRLSIWLRRNK-DF 89
+ V+C +C IL KP+ + C H+ CL+C+ +I + S CP+C+ + R+N F
Sbjct: 12 EEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSV----RKNAIRF 67
Query: 90 SLLIDENLWNQIQKYYKKEVDQK 112
+ L+ NL +IQ EV K
Sbjct: 68 NSLL-RNLVEKIQALQASEVQSK 89
>UNIPROTKB|E7ETS6 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR753815 HGNC:HGNC:16289 IPI:IPI01021215
ProteinModelPortal:E7ETS6 SMR:E7ETS6 Ensembl:ENST00000552122
ArrayExpress:E7ETS6 Uniprot:E7ETS6
Length = 425
Score = 121 (47.7 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN--LSCPMCRKRLSIWLRRNK-DF 89
+ V+C +C IL KP+ + C H+ CL+C+ +I + S CP+C+ + R+N F
Sbjct: 12 EEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSV----RKNAIRF 67
Query: 90 SLLIDENLWNQIQKYYKKEVDQK 112
+ L+ NL +IQ EV K
Sbjct: 68 NSLL-RNLVEKIQALQASEVQSK 89
>UNIPROTKB|F8W1J7 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 IPI:IPI01021230
ProteinModelPortal:F8W1J7 SMR:F8W1J7 Ensembl:ENST00000550336
Uniprot:F8W1J7
Length = 425
Score = 121 (47.7 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN--LSCPMCRKRLSIWLRRNK-DF 89
+ V+C +C IL KP+ + C H+ CL+C+ +I + S CP+C+ + R+N F
Sbjct: 12 EEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSV----RKNAIRF 67
Query: 90 SLLIDENLWNQIQKYYKKEVDQK 112
+ L+ NL +IQ EV K
Sbjct: 68 NSLL-RNLVEKIQALQASEVQSK 89
>UNIPROTKB|G8JLN1 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 SMR:G8JLN1
Ensembl:ENST00000455349 Ensembl:ENST00000552059 Uniprot:G8JLN1
Length = 425
Score = 121 (47.7 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN--LSCPMCRKRLSIWLRRNK-DF 89
+ V+C +C IL KP+ + C H+ CL+C+ +I + S CP+C+ + R+N F
Sbjct: 12 EEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSV----RKNAIRF 67
Query: 90 SLLIDENLWNQIQKYYKKEVDQK 112
+ L+ NL +IQ EV K
Sbjct: 68 NSLL-RNLVEKIQALQASEVQSK 89
>UNIPROTKB|Q9BZY9 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005739 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL669914 EMBL:AL671859 EMBL:CR753815
EMBL:AF230386 EMBL:AF230387 EMBL:BT006675 EMBL:AK222729
EMBL:BX322644 EMBL:BC016866 EMBL:BC017017 EMBL:Y07828
IPI:IPI00292397 IPI:IPI00292398 RefSeq:NP_008959.3
UniGene:Hs.493275 PDB:2YSJ PDB:2YSL PDBsum:2YSJ PDBsum:2YSL
ProteinModelPortal:Q9BZY9 SMR:Q9BZY9 IntAct:Q9BZY9 STRING:Q9BZY9
DMDM:68068082 PRIDE:Q9BZY9 DNASU:11074 Ensembl:ENST00000357569
Ensembl:ENST00000376734 Ensembl:ENST00000433864
Ensembl:ENST00000445679 Ensembl:ENST00000449412
Ensembl:ENST00000453266 Ensembl:ENST00000540829
Ensembl:ENST00000547935 Ensembl:ENST00000550451
Ensembl:ENST00000551027 Ensembl:ENST00000552274
Ensembl:ENST00000552311 GeneID:11074 KEGG:hsa:11074 UCSC:uc003npg.1
CTD:11074 GeneCards:GC06M030073 H-InvDB:HIX0005686
H-InvDB:HIX0166392 HGNC:HGNC:16289 HPA:HPA046400 MIM:609316
neXtProt:NX_Q9BZY9 PharmGKB:PA38117 eggNOG:NOG310139
HOVERGEN:HBG083771 KO:K12011 OMA:EFQFLNP OrthoDB:EOG4K0QNJ
EvolutionaryTrace:Q9BZY9 GenomeRNAi:11074 NextBio:42098
ArrayExpress:Q9BZY9 Bgee:Q9BZY9 Genevestigator:Q9BZY9
GermOnline:ENSG00000204616 Uniprot:Q9BZY9
Length = 425
Score = 121 (47.7 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN--LSCPMCRKRLSIWLRRNK-DF 89
+ V+C +C IL KP+ + C H+ CL+C+ +I + S CP+C+ + R+N F
Sbjct: 12 EEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSV----RKNAIRF 67
Query: 90 SLLIDENLWNQIQKYYKKEVDQK 112
+ L+ NL +IQ EV K
Sbjct: 68 NSLL-RNLVEKIQALQASEVQSK 89
>UNIPROTKB|I3LT33 [details] [associations]
symbol:LONRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GO:GO:0004176 GeneTree:ENSGT00440000033329 EMBL:CU638828
Ensembl:ENSSSCT00000027883 Uniprot:I3LT33
Length = 717
Score = 124 (48.7 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 25/100 (25%), Positives = 51/100 (51%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H C CL+R D++ CP+C++ L +L D + +
Sbjct: 423 CSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPY-CPLCKESLKEYLA---DRRYCVTQL 478
Query: 97 LWNQIQKYYKKEVDQ--KLFDQDDGVWENYHQHISTYLLT 134
L + I KY E+ + K++D++ + +++ ++ T
Sbjct: 479 LEDLIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCT 518
>ZFIN|ZDB-GENE-081030-6 [details] [associations]
symbol:trim35-38 "tripartite motif containing 35-38"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-6 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU137686 IPI:IPI00859170 Ensembl:ENSDART00000036309
Uniprot:E7F326
Length = 450
Score = 121 (47.7 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 27/69 (39%), Positives = 37/69 (53%)
Query: 36 LCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRKRLSIWLRRNKDFSLLID 94
+C VCQ I P+ L C+H C ECLQ+ N N CP+CR+R S + N +L +
Sbjct: 10 ICPVCQEIFKTPVILSCSHSFCKECLQQFWRNKNTQECPVCRRRSS---KENPPVNLAL- 65
Query: 95 ENLWNQIQK 103
+NL K
Sbjct: 66 QNLCESFLK 74
>UNIPROTKB|F1SEU6 [details] [associations]
symbol:LONRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GO:GO:0004176 OMA:GHSYCRR GeneTree:ENSGT00440000033329
EMBL:CU638828 Ensembl:ENSSSCT00000007633 Uniprot:F1SEU6
Length = 770
Score = 124 (48.7 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 25/100 (25%), Positives = 51/100 (51%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H C CL+R D++ CP+C++ L +L D + +
Sbjct: 476 CSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPY-CPLCKESLKEYLA---DRRYCVTQL 531
Query: 97 LWNQIQKYYKKEVDQ--KLFDQDDGVWENYHQHISTYLLT 134
L + I KY E+ + K++D++ + +++ ++ T
Sbjct: 532 LEDLIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCT 571
>UNIPROTKB|Q2KHN1 [details] [associations]
symbol:RNF151 "RING finger protein 151" species:9606 "Homo
sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS51081 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
GO:GO:0007283 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 CTD:146310
eggNOG:NOG319521 HOGENOM:HOG000154154 HOVERGEN:HBG087956
OrthoDB:EOG4V6ZHF EMBL:BC029501 EMBL:BC113014 IPI:IPI00399168
RefSeq:NP_777563.2 UniGene:Hs.99354 ProteinModelPortal:Q2KHN1
SMR:Q2KHN1 PhosphoSite:Q2KHN1 DMDM:119371030 PRIDE:Q2KHN1
Ensembl:ENST00000321392 Ensembl:ENST00000569714 GeneID:146310
KEGG:hsa:146310 UCSC:uc002cnt.1 GeneCards:GC16P002054
HGNC:HGNC:23235 neXtProt:NX_Q2KHN1 PharmGKB:PA134992556
InParanoid:Q2KHN1 GenomeRNAi:146310 NextBio:85326 Bgee:Q2KHN1
CleanEx:HS_RNF151 Genevestigator:Q2KHN1 GermOnline:ENSG00000179580
Uniprot:Q2KHN1
Length = 245
Score = 116 (45.9 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 32 PDS-VLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
PDS +C VC G+L +P +LPC+H C +C+ R +CP CRK +
Sbjct: 14 PDSNFVCSVCHGVLKRPARLPCSHIFCKKCILRWLARQK-TCPCCRKEV 61
>RGD|1562583 [details] [associations]
symbol:Lonrf1 "LON peptidase N-terminal domain and ring finger
1" species:10116 "Rattus norvegicus" [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00184 Pfam:PF00097 RGD:1562583
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
GeneTree:ENSGT00440000033329 IPI:IPI00358818
Ensembl:ENSRNOT00000015142 Uniprot:F1LWE5
Length = 820
Score = 124 (48.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 25/100 (25%), Positives = 51/100 (51%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H C CL+R D++ CP+C++ L +L D + +
Sbjct: 526 CSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPY-CPLCKESLKEYLA---DRRYCVTQL 581
Query: 97 LWNQIQKYYKKEVDQ--KLFDQDDGVWENYHQHISTYLLT 134
L + I KY E+ + K++D++ + +++ ++ T
Sbjct: 582 LEDLIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCT 621
>ZFIN|ZDB-GENE-081030-14 [details] [associations]
symbol:trim35-37 "tripartite motif containing 35-37"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-081030-14
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 EMBL:CU137686 IPI:IPI00512555
Ensembl:ENSDART00000140241 Uniprot:E9QHI9
Length = 409
Score = 120 (47.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 36 LCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRKRLS 80
+C VCQ I P+ L C+H C ECLQ+ N N CP+CR+R S
Sbjct: 10 ICPVCQEIFKTPVLLSCSHSFCKECLQQFWRNKNTQECPVCRRRSS 55
>ZFIN|ZDB-GENE-081030-9 [details] [associations]
symbol:trim35-35 "tripartite motif containing 35-35"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-9 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU137686 IPI:IPI00801454 RefSeq:XP_003201191.1
Ensembl:ENSDART00000074139 GeneID:100534748 KEGG:dre:100534748
Uniprot:F1QZ49
Length = 450
Score = 120 (47.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 28 NTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRKRLS 80
++LT + C VCQ I P+ L C+H C ECLQ+ + N CP+CR+R S
Sbjct: 2 SSLTEYDLTCPVCQDIFKTPVLLSCSHSFCKECLQQFWISKNTQECPVCRRRSS 55
>UNIPROTKB|J9P3L7 [details] [associations]
symbol:LONRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 OMA:GHSYCRR
GeneTree:ENSGT00440000033329 EMBL:AAEX03010436 EMBL:AAEX03010437
Ensembl:ENSCAFT00000047804 Uniprot:J9P3L7
Length = 769
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/100 (25%), Positives = 50/100 (50%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H C CL+R D++ CP+C++ L +L D + +
Sbjct: 475 CSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPY-CPLCKESLKEYLA---DRRYCVTQL 530
Query: 97 LWNQIQKYYKKEVDQ--KLFDQDDGVWENYHQHISTYLLT 134
L I KY E+ + K++D++ + +++ ++ T
Sbjct: 531 LEELIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCT 570
>UNIPROTKB|Q17RB8 [details] [associations]
symbol:LONRF1 "LON peptidase N-terminal domain and RING
finger protein 1" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 EMBL:AC123777 EMBL:AK074329
EMBL:AK297266 EMBL:AK300538 EMBL:BC004538 EMBL:BC117381
EMBL:BC117385 IPI:IPI00291662 IPI:IPI00872653 RefSeq:NP_689484.3
UniGene:Hs.180178 ProteinModelPortal:Q17RB8 SMR:Q17RB8
IntAct:Q17RB8 STRING:Q17RB8 PhosphoSite:Q17RB8 DMDM:257051033
PaxDb:Q17RB8 PRIDE:Q17RB8 Ensembl:ENST00000398246
Ensembl:ENST00000533751 GeneID:91694 KEGG:hsa:91694 UCSC:uc003wwd.1
CTD:91694 GeneCards:GC08M012579 HGNC:HGNC:26302 HPA:HPA023584
HPA:HPA024814 neXtProt:NX_Q17RB8 PharmGKB:PA128394743
eggNOG:COG2802 HOGENOM:HOG000060199 HOVERGEN:HBG081924
InParanoid:Q17RB8 OMA:GHSYCRR OrthoDB:EOG4WQ12B GenomeRNAi:91694
NextBio:77403 ArrayExpress:Q17RB8 Bgee:Q17RB8 CleanEx:HS_LONRF1
Genevestigator:Q17RB8 Uniprot:Q17RB8
Length = 773
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/100 (25%), Positives = 50/100 (50%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H C CL+R D++ CP+C++ L +L D + +
Sbjct: 479 CSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPY-CPLCKESLKEYLA---DRRYCVTQL 534
Query: 97 LWNQIQKYYKKEVDQ--KLFDQDDGVWENYHQHISTYLLT 134
L I KY E+ + K++D++ + +++ ++ T
Sbjct: 535 LEELIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCT 574
>UNIPROTKB|H7C3H8 [details] [associations]
symbol:RNF135 "E3 ubiquitin-protein ligase RNF135"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC138207 HGNC:HGNC:21158 ChiTaRS:RNF135
ProteinModelPortal:H7C3H8 Ensembl:ENST00000443677 Bgee:H7C3H8
Uniprot:H7C3H8
Length = 162
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRIC---DNSNLSCPMCRK 77
L D + C++CQG+L P LPC H C CL+ + D +CP CR+
Sbjct: 14 LAEDDLGCIICQGLLDWPATLPCGHSFCRHCLEALWGARDARRWACPTCRQ 64
>RGD|1305795 [details] [associations]
symbol:Trim21 "tripartite motif-containing 21" species:10116
"Rattus norvegicus" [GO:0000209 "protein polyubiquitination"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA;ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0045787
"positive regulation of cell cycle" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0070206 "protein
trimerization" evidence=IEA;ISO] [GO:0090086 "negative regulation
of protein deubiquitination" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643
PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 RGD:1305795 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0019005
GO:GO:0032088 GO:GO:0004842 GO:GO:0000209 GO:GO:0070206
InterPro:IPR017907 GO:GO:0051865 GO:GO:0045787 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0031648
GO:GO:0006513 InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407
SMART:SM00589 GO:GO:0090086 GeneTree:ENSGT00690000101646
OrthoDB:EOG4KWJSP IPI:IPI00359044 Ensembl:ENSRNOT00000024992
UCSC:RGD:1305795 Uniprot:D4ACF2
Length = 474
Score = 120 (47.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIW-LRRNKDFSL 91
+ V C +C +++P+ + C H C EC+ + N SCP+CR+ + LR N+ +
Sbjct: 16 EEVTCSICLEPMVEPMSIECGHCFCKECISEVGGNGGGSCPVCRQHFLLRNLRPNRHIAN 75
Query: 92 LIDENLWNQIQKYYK 106
++ ENL + Q K
Sbjct: 76 MV-ENLKQEAQNTKK 89
>ZFIN|ZDB-GENE-080516-2 [details] [associations]
symbol:btr06 "bloodthirsty-related gene family,
member 6" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-080516-2 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030144 IPI:IPI00770946
Ensembl:ENSDART00000076318 Bgee:F1QZB6 Uniprot:F1QZB6
Length = 556
Score = 120 (47.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 21 NEDCNSNNTLTP--DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNL-SCPMCRK 77
+E + +++++P + + C VC + P+ PC H+ C CL +NS + SCP+CR+
Sbjct: 21 DEPPSLSSSMSPLFEELQCSVCLDVFTDPVSTPCGHNFCKSCLNSSWENSQVCSCPLCRE 80
Query: 78 RLS 80
R S
Sbjct: 81 RFS 83
>ZFIN|ZDB-GENE-040801-199 [details] [associations]
symbol:trim35-36 "tripartite motif containing
35-36" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-040801-199 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 HOGENOM:HOG000124586
OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887
EMBL:CU137686 EMBL:BC077164 IPI:IPI00511023 RefSeq:NP_001003462.1
UniGene:Dr.73072 Ensembl:ENSDART00000031534 GeneID:445068
KEGG:dre:445068 CTD:445068 InParanoid:Q6DEF5 OMA:WIVELKE
NextBio:20831830 Uniprot:Q6DEF5
Length = 450
Score = 118 (46.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRKRLS 80
C VCQ I P+ L C+H C ECLQ+ N N CP+CR+R S
Sbjct: 11 CPVCQDIFKTPVILSCSHSFCKECLQQFWRNKNTQECPVCRRRSS 55
>ZFIN|ZDB-GENE-040718-482 [details] [associations]
symbol:zgc:92594 "zgc:92594" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-040718-482 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:FP236812 GeneTree:ENSGT00690000102221
IPI:IPI00993075 Ensembl:ENSDART00000128137 ArrayExpress:F1R3Q1
Bgee:F1R3Q1 Uniprot:F1R3Q1
Length = 437
Score = 105 (42.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 27 NNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRI---CDNSNLSCPMCRKRLSIWL 83
++++ + + C VC + P LPC H+ CL+CL+R+ + L CP CR+
Sbjct: 7 DSSVLEEELTCPVCLDLYRDPHLLPCGHNFCLQCLRRLKGRSERGRLRCPECRQTHRCAA 66
Query: 84 RRNKDFSL 91
K+F L
Sbjct: 67 AWQKNFKL 74
Score = 33 (16.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 110 DQKLFDQDD 118
D++ FD+DD
Sbjct: 387 DEESFDEDD 395
>POMBASE|SPAC6B12.07c [details] [associations]
symbol:SPAC6B12.07c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005829
"cytosol" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=ISM]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
PomBase:SPAC6B12.07c Prosite:PS00518 GO:GO:0005829 EMBL:CU329670
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 InterPro:IPR004331 Pfam:PF03105
PROSITE:PS51382 eggNOG:COG5574 PIR:T39014 RefSeq:NP_593762.2
EnsemblFungi:SPAC6B12.07c.1 GeneID:2543315 OrthoDB:EOG4SFDFM
NextBio:20804332 Uniprot:O14212
Length = 470
Score = 118 (46.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + KP++L C+H CL CL + CP+CR + + K S ID
Sbjct: 374 CAICSNVAYKPVRLGCSHVFCLHCLIILQKQKVDFCPLCRAKEVM-----KADSRNIDHA 428
Query: 97 LWNQIQKYYKKEVDQKLFDQDD 118
L N ++ Y+ +E+ +K F++++
Sbjct: 429 LMNFMKTYFPREIKEK-FEENE 449
>UNIPROTKB|E1BSU9 [details] [associations]
symbol:LOC416147 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02074984
IPI:IPI00590049 Ensembl:ENSGALT00000001837 OMA:PIEERRC
Uniprot:E1BSU9
Length = 274
Score = 114 (45.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/89 (28%), Positives = 47/89 (52%)
Query: 22 EDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDN-----SNLSCPMCR 76
E+ ++++L D + C +C + P+ L C H C +C+Q++ N ++ SCP+CR
Sbjct: 6 EEVRASSSLE-DELTCSICLSLYKNPVSLCCGHSFCKQCVQKVLSNQQQAKASYSCPLCR 64
Query: 77 KRLSIWLRRNKDFSL--LIDENLWNQIQK 103
L L +F L +++ L N+ +K
Sbjct: 65 VDLGPILELQNNFHLCSIVETYLANKGKK 93
>RGD|1305252 [details] [associations]
symbol:Rnf135 "ring finger protein 135" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm" evidence=IEA;ISO;ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO;ISS] [GO:0032728 "positive regulation
of interferon-beta production" evidence=IEA;ISO;ISS] [GO:0043021
"ribonucleoprotein complex binding" evidence=IEA;ISO] [GO:0045087
"innate immune response" evidence=IEA] [GO:0045088 "regulation of
innate immune response" evidence=IEA;ISO;ISS] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 RGD:1305252 Prosite:PS00518 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0045087 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
eggNOG:COG1100 InterPro:IPR017907 GO:GO:0045088 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GO:GO:0032728 HSSP:Q13049 CTD:84282
HOVERGEN:HBG056606 KO:K16272 OMA:WLYGLHP OrthoDB:EOG49S66X
EMBL:BC087718 IPI:IPI00421399 RefSeq:NP_001012010.1
UniGene:Rn.225330 ProteinModelPortal:Q5M929 STRING:Q5M929
PRIDE:Q5M929 GeneID:303350 KEGG:rno:303350 NextBio:651196
ArrayExpress:Q5M929 Genevestigator:Q5M929 Uniprot:Q5M929
Length = 415
Score = 117 (46.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRI-------CDNSNLSCPMCRKRLSIW 82
L+ + + C++CQG+L P LPC H CL+CL+ + D+ +CP+CRK S
Sbjct: 14 LSEEDLSCIICQGLLDWPTTLPCGHSFCLQCLKDLWVSKRAGVDSCPWACPICRKGPSAK 73
Query: 83 --LRRNKDFSLLIDE 95
L +N L+D+
Sbjct: 74 PVLHKNPLLQDLVDK 88
>RGD|1359438 [details] [associations]
symbol:Trim10 "tripartite motif-containing 10" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IEA;ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 RGD:1359438 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0030218 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:BX883051 HOGENOM:HOG000234133
HOVERGEN:HBG001357 CTD:10107 eggNOG:NOG301877 KO:K12002
OrthoDB:EOG4BG8W2 GeneTree:ENSGT00690000101808 EMBL:CH474093
EMBL:BC129078 IPI:IPI00781874 RefSeq:NP_001009176.1
UniGene:Rn.140858 STRING:Q6MFY9 Ensembl:ENSRNOT00000001016
GeneID:294210 KEGG:rno:294210 UCSC:RGD:1359438 NextBio:637772
Genevestigator:Q6MFY9 Uniprot:Q6MFY9
Length = 489
Score = 118 (46.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 29 TLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDN------SNLSCPMCRK 77
T D V C +CQG L +P+ + C H+ C CL R C+ +LSCP+C++
Sbjct: 8 TSLADEVNCPICQGTLREPVTIDCGHNFCRGCLTRFCETPGPESEESLSCPLCKE 62
>UNIPROTKB|F1P3J6 [details] [associations]
symbol:Gga.40071 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:GHSYCRR GeneTree:ENSGT00440000033329 EMBL:AADN02031324
IPI:IPI00597781 Ensembl:ENSGALT00000022307 Uniprot:F1P3J6
Length = 597
Score = 119 (46.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 27/100 (27%), Positives = 50/100 (50%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C + +P+ PC H C CL+R D++ CP+C++ L +L K +S I E
Sbjct: 303 CSLCMRLFFEPVTTPCGHTFCKGCLERCLDHAP-QCPLCKESLKEYLASRK-YS--ITEL 358
Query: 97 LWNQIQKYYKKEVDQK--LFDQDDGVWENYHQHISTYLLT 134
L I KY E+ ++ + ++ N +++ ++ T
Sbjct: 359 LEELIMKYLSDELYERKRIHAEETAEHSNLTKNVPMFVCT 398
>DICTYBASE|DDB_G0285953 [details] [associations]
symbol:DDB_G0285953 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046580 "negative regulation of Ras protein signal
transduction" evidence=IBA] [GO:0032320 "positive regulation of Ras
GTPase activity" evidence=IBA] [GO:0031235 "intrinsic to internal
side of plasma membrane" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005099 "Ras GTPase activator activity"
evidence=IBA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0285953 GO:GO:0005737 GO:GO:0046872 GO:GO:0005099
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AAFI02000082 GO:GO:0031235 GO:GO:0046580 RefSeq:XP_637973.1
ProteinModelPortal:Q54ML7 EnsemblProtists:DDB0218752 GeneID:8625325
KEGG:ddi:DDB_G0285953 eggNOG:NOG272829 InParanoid:Q54ML7
OMA:NTTHATE Uniprot:Q54ML7
Length = 512
Score = 118 (46.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 24/65 (36%), Positives = 31/65 (47%)
Query: 20 DNEDCNSNNTLTPDSV---LCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCR 76
+NED N N D C +CQ + P PCNH C EC + + L CP+CR
Sbjct: 436 NNEDLNKNTNKDSDKNEKDFCPICQSEFVNPYYSPCNHTCCFECWNQWL-SLKLECPVCR 494
Query: 77 KRLSI 81
+R I
Sbjct: 495 ERCRI 499
>UNIPROTKB|F1RHN8 [details] [associations]
symbol:TRIM21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090086 "negative regulation of protein
deubiquitination" evidence=IEA] [GO:0070206 "protein trimerization"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0019005 GO:GO:0032088 GO:GO:0004842
GO:GO:0000209 GO:GO:0070206 InterPro:IPR017907 GO:GO:0051865
GO:GO:0045787 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 GO:GO:0031648 GO:GO:0006513 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0090086
GeneTree:ENSGT00690000101646 EMBL:CU915729
Ensembl:ENSSSCT00000016131 OMA:HITRIEA Uniprot:F1RHN8
Length = 469
Score = 117 (46.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIW-LRRNKDFSL 91
D V C +C +++P+ + C H C EC+ + + CP+CR+ + LR N+ +
Sbjct: 12 DEVTCSICLDPMVEPVSIECGHSFCQECISEVGKDGGSVCPVCRQHFLLRNLRPNRQVAN 71
Query: 92 LIDENL 97
++D NL
Sbjct: 72 MVD-NL 76
>MGI|MGI:1338757 [details] [associations]
symbol:Trim10 "tripartite motif-containing 10" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
MGI:MGI:1338757 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0030218
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 HOVERGEN:HBG001357 CTD:10107 eggNOG:NOG301877
KO:K12002 OrthoDB:EOG4BG8W2 OMA:EEPPTCP EMBL:AF134811 EMBL:AF220121
EMBL:AK011082 EMBL:BC051632 IPI:IPI00322857 RefSeq:NP_035410.2
UniGene:Mm.299155 ProteinModelPortal:Q9WUH5 SMR:Q9WUH5
STRING:Q9WUH5 PhosphoSite:Q9WUH5 PRIDE:Q9WUH5
Ensembl:ENSMUST00000060524 GeneID:19824 KEGG:mmu:19824
UCSC:uc008clj.2 GeneTree:ENSGT00690000101808 InParanoid:Q9WUH5
NextBio:297297 Bgee:Q9WUH5 CleanEx:MM_TRIM10 Genevestigator:Q9WUH5
GermOnline:ENSMUSG00000073400 Uniprot:Q9WUH5
Length = 489
Score = 117 (46.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 29 TLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICD------NSNLSCPMCRK 77
T D V C +CQG L +P+ + C H+ C CL R C+ +LSCP+C++
Sbjct: 8 TSLADEVNCPICQGTLREPVTIDCGHNFCRGCLTRYCEIPGPESEESLSCPLCKE 62
>ZFIN|ZDB-GENE-080219-8 [details] [associations]
symbol:btr05 "bloodthirsty-related gene family,
member 5" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080219-8 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030144 IPI:IPI00834702
RefSeq:XP_003198957.1 UniGene:Dr.117914 Ensembl:ENSDART00000076300
GeneID:794264 KEGG:dre:794264 CTD:794264 NextBio:20931784
Bgee:F1QZD0 Uniprot:F1QZD0
Length = 505
Score = 117 (46.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNL-SCPMCRKRLS 80
+ + C VC + P+ PC H+ C CL +NS + SCP+CR+R S
Sbjct: 34 EELQCSVCLDVFTDPVSTPCGHNFCKSCLNSSWENSQVCSCPLCRERFS 82
>ZFIN|ZDB-GENE-081030-23 [details] [associations]
symbol:trim35-34 "tripartite motif containing 35-34"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-23 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 OrthoDB:EOG4QNMW8
GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887 EMBL:CU539057
IPI:IPI00900847 RefSeq:NP_001137520.1 UniGene:Dr.154012
Ensembl:ENSDART00000036283 GeneID:566050 KEGG:dre:566050
OMA:WALARIT NextBio:20887999 Uniprot:B8JLS7
Length = 452
Score = 116 (45.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 23/50 (46%), Positives = 27/50 (54%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRKRLSI 81
D C VCQ I P+ L C H C ECLQ+ + N CP+CR R SI
Sbjct: 7 DDYTCPVCQDIFKTPVILSCGHSFCQECLQQCWRSENTQECPVCRTRSSI 56
>ZFIN|ZDB-GENE-070705-379 [details] [associations]
symbol:btr27 "bloodthirsty-related gene family,
member 27" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070705-379 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
eggNOG:NOG252602 OrthoDB:EOG4BVRTF HOVERGEN:HBG106862 EMBL:CR853286
IPI:IPI00962937 Ensembl:ENSDART00000132370
GeneTree:ENSGT00660000095328 Uniprot:A5WUZ3
Length = 549
Score = 117 (46.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 28/90 (31%), Positives = 48/90 (53%)
Query: 25 NSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNL-SCPMCRKRLSIWL 83
+S+N L+ + + C +C + P+ PC H+ C CL + +NS SCP C++
Sbjct: 28 SSSNPLS-EELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSQTCSCPYCKETF---- 82
Query: 84 RRNKDFSLLIDENLWNQIQKYYK-KEVDQK 112
R D L I+ L +I ++YK K+ ++K
Sbjct: 83 RHRPD--LKINTTL-REISEHYKEKKPEEK 109
>UNIPROTKB|F1PIC3 [details] [associations]
symbol:TRIM10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030218 "erythrocyte differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0030218 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 CTD:10107 KO:K12002
OMA:EEPPTCP GeneTree:ENSGT00690000101808 EMBL:AAEX03017625
RefSeq:XP_545467.3 Ensembl:ENSCAFT00000019388 GeneID:488345
KEGG:cfa:488345 Uniprot:F1PIC3
Length = 478
Score = 116 (45.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICD------NSNLSCPMCRKRLSIW-LRR 85
D V C +CQG L +P+ + C H+ C CL R C+ N L CP+C++ + R
Sbjct: 9 DEVSCPICQGTLREPVTVDCGHNYCRACLTRYCEIPGPDPNEPLHCPLCKEPFRLGGFRP 68
Query: 86 NKDFSLLIDENL 97
N + ++ EN+
Sbjct: 69 NWQLASVV-ENI 79
>RGD|1307023 [details] [associations]
symbol:Rhot1 "ras homolog family member T1" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019725 "cellular homeostasis"
evidence=ISO] [GO:0031307 "integral to mitochondrial outer
membrane" evidence=ISO] [GO:0032728 "positive regulation of
interferon-beta production" evidence=IEA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IEA] [GO:0045088
"regulation of innate immune response" evidence=IEA] [GO:0047497
"mitochondrion transport along microtubule" evidence=ISO]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 RGD:1305252 RGD:1307023 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG056606
HOGENOM:HOG000060145 IPI:IPI00421399 UniGene:Rn.225330
EMBL:AY539935 STRING:Q6QI24 Ensembl:ENSRNOT00000005428
Genevestigator:Q6QI24 Uniprot:Q6QI24
Length = 596
Score = 117 (46.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRI-------CDNSNLSCPMCRKRLSIW 82
L+ + + C++CQG+L P LPC H CL+CL+ + D+ +CP+CRK S
Sbjct: 14 LSEEDLSCIICQGLLDWPTTLPCGHSFCLQCLKDLWVSKRAGVDSCPWACPICRKGPSAK 73
Query: 83 --LRRNKDFSLLIDE 95
L +N L+D+
Sbjct: 74 PVLHKNPLLQDLVDK 88
>UNIPROTKB|Q6QI24 [details] [associations]
symbol:Rhot1 "Protein Rhot1" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043021 "ribonucleoprotein complex binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 RGD:1305252 RGD:1307023 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG056606
HOGENOM:HOG000060145 IPI:IPI00421399 UniGene:Rn.225330
EMBL:AY539935 STRING:Q6QI24 Ensembl:ENSRNOT00000005428
Genevestigator:Q6QI24 Uniprot:Q6QI24
Length = 596
Score = 117 (46.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRI-------CDNSNLSCPMCRKRLSIW 82
L+ + + C++CQG+L P LPC H CL+CL+ + D+ +CP+CRK S
Sbjct: 14 LSEEDLSCIICQGLLDWPTTLPCGHSFCLQCLKDLWVSKRAGVDSCPWACPICRKGPSAK 73
Query: 83 --LRRNKDFSLLIDE 95
L +N L+D+
Sbjct: 74 PVLHKNPLLQDLVDK 88
>ZFIN|ZDB-GENE-101021-4 [details] [associations]
symbol:lonrf1 "LON peptidase N-terminal domain and
ring finger 1" species:7955 "Danio rerio" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-101021-4 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
GeneTree:ENSGT00440000033329 EMBL:FP016207 EMBL:FP085387
EMBL:FP101912 IPI:IPI00998181 Ensembl:ENSDART00000109935
Bgee:F1QKK1 Uniprot:F1QKK1
Length = 605
Score = 117 (46.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 22 EDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSI 81
E C S LT C +C + +P+ PC H C C++R D+ NL CP+C++ L
Sbjct: 302 ESCLS--VLTVSDFECPLCIRLFYEPVTTPCGHTFCKNCIERSLDH-NLRCPLCKQPLQE 358
Query: 82 WLRRNK-DFSLLIDE 95
+ + K + ++L+ E
Sbjct: 359 YFKNRKYNPTVLLQE 373
>ZFIN|ZDB-GENE-081031-1 [details] [associations]
symbol:trim35-33 "tripartite motif containing 35-33"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081031-1 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU539057 EMBL:CU861903 IPI:IPI00486447 RefSeq:XP_001342275.1
Ensembl:ENSDART00000146662 GeneID:100002502 KEGG:dre:100002502
NextBio:20785475 Uniprot:F1R7D2
Length = 459
Score = 115 (45.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 36 LCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRKRLS 80
+C VCQ I P+ L C+H C ECLQ+ + N CP+CR+R S
Sbjct: 10 ICPVCQDIFKTPVILSCSHSFCQECLQQFWRSKNTQECPVCRRRSS 55
>ZFIN|ZDB-GENE-080213-2 [details] [associations]
symbol:btr18 "bloodthirsty-related gene family,
member 18" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-080213-2 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030005
Ensembl:ENSDART00000013850 Bgee:I3IT62 Uniprot:I3IT62
Length = 533
Score = 115 (45.5 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 25 NSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNL-SCPMCRKRLSIWL 83
+S+N L+ + + C VC + P+ PC H+ C CL + +NS SCP C++ +
Sbjct: 1 SSSNPLS-EELQCSVCLEVFTDPVSTPCGHNFCRSCLNKCWNNSETCSCPYCKETFT--- 56
Query: 84 RRNKDFSLLIDENLWNQIQKYYK-KEVDQK 112
+ D L I+ L +I ++YK K+ ++K
Sbjct: 57 -QRPD--LKINTTL-REISEHYKEKKPEEK 82
>UNIPROTKB|Q7YRV4 [details] [associations]
symbol:TRIM21 "E3 ubiquitin-protein ligase TRIM21"
species:9913 "Bos taurus" [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0090086 "negative regulation of protein deubiquitination"
evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045787 "positive
regulation of cell cycle" evidence=ISS] [GO:0032088 "negative
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0031648 "protein destabilization" evidence=ISS]
[GO:0006513 "protein monoubiquitination" evidence=ISS] [GO:0000209
"protein polyubiquitination" evidence=ISS] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 InterPro:IPR020457
Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0007049 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000932 GO:GO:0032088 GO:GO:0004842
GO:GO:0000209 InterPro:IPR017907 GO:GO:0051865 GO:GO:0045787
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GO:GO:0031648 GO:GO:0006513 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GO:GO:0090086 EMBL:AY312278
EMBL:BT021885 EMBL:BC123700 IPI:IPI00701095 RefSeq:NP_872596.1
UniGene:Bt.106989 ProteinModelPortal:Q7YRV4 SMR:Q7YRV4 PRIDE:Q7YRV4
Ensembl:ENSBTAT00000018459 GeneID:359715 KEGG:bta:359715 CTD:6737
eggNOG:NOG276395 GeneTree:ENSGT00690000101646 HOGENOM:HOG000234133
HOVERGEN:HBG001357 InParanoid:Q7YRV4 KO:K10651 OrthoDB:EOG4KWJSP
NextBio:20812746 Uniprot:Q7YRV4
Length = 469
Score = 114 (45.2 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 29 TLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIW-LRRNK 87
T+ + V C +C +++P+ + C H C EC+ + CP+CR+ + LR N+
Sbjct: 8 TMMWEEVTCSICLDPMVEPMSIECGHSFCQECISEVGKEGGSVCPVCRRHFLLQNLRPNR 67
Query: 88 DFSLLIDENL 97
+ ++D NL
Sbjct: 68 QVANMVD-NL 76
>UNIPROTKB|F1PJN4 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042393 "histone binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:AAEX03012542
EMBL:AAEX03012543 EMBL:AAEX03012544 EMBL:AAEX03012540
EMBL:AAEX03012541 Ensembl:ENSCAFT00000030070 Uniprot:F1PJN4
Length = 792
Score = 105 (42.0 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL--SIWLRRNKDFSLLID 94
C+ CQ ++ +PI C H+VC +CL R SCP CR L S ++ N+ +++
Sbjct: 723 CICCQELVYRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQAILN 782
Query: 95 E 95
+
Sbjct: 783 Q 783
Score = 35 (17.4 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 9 DVSLLLVNSKMDNED--CNSNNTLTP-DSVL 36
+ ++ V K ++D C+S ++ TP D V+
Sbjct: 156 EAQVVRVTRKAPSQDEPCSSTSSSTPEDDVI 186
>UNIPROTKB|G3MWU8 [details] [associations]
symbol:TRIM21 "E3 ubiquitin-protein ligase TRIM21"
species:9913 "Bos taurus" [GO:0090086 "negative regulation of
protein deubiquitination" evidence=IEA] [GO:0070206 "protein
trimerization" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0045787 "positive regulation
of cell cycle" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 InterPro:IPR020457
Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0019005 GO:GO:0032088 GO:GO:0004842
GO:GO:0000209 GO:GO:0070206 InterPro:IPR017907 GO:GO:0051865
GO:GO:0045787 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 GO:GO:0031648 GO:GO:0006513 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0090086
GeneTree:ENSGT00690000101646 EMBL:DAAA02040970 EMBL:DAAA02040968
EMBL:DAAA02040969 Ensembl:ENSBTAT00000063640 OMA:LCVVHRE
Uniprot:G3MWU8
Length = 513
Score = 114 (45.2 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 29 TLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIW-LRRNK 87
T+ + V C +C +++P+ + C H C EC+ + CP+CR+ + LR N+
Sbjct: 20 TMMWEEVTCSICLDPMVEPMSIECGHSFCQECISEVGKEGGSVCPVCRRHFLLQNLRPNR 79
Query: 88 DFSLLIDENL 97
+ ++D NL
Sbjct: 80 QVANMVD-NL 88
>ASPGD|ASPL0000000141 [details] [associations]
symbol:AN5961 species:162425 "Emericella nidulans"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 Pfam:PF02190 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 EMBL:BN001301 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AACD01000101 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 eggNOG:COG2802 OrthoDB:EOG437VPJ
RefSeq:XP_663565.1 ProteinModelPortal:Q5B0G9
EnsemblFungi:CADANIAT00007064 GeneID:2870893 KEGG:ani:AN5961.2
HOGENOM:HOG000163327 OMA:DCQVCYS Uniprot:Q5B0G9
Length = 623
Score = 115 (45.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWL-----RRNKDFSL 91
C VC +++ P+ PC H C C+ +SNL CP+CR++L++ R NK S
Sbjct: 204 CQVCYSLILDPLTTPCGHTFCRRCVAMALSHSNL-CPICRRKLNMPSSVRSERNNKSLSD 262
Query: 92 LIDENLWNQI 101
+I+ L +++
Sbjct: 263 IIETLLPDEV 272
>ZFIN|ZDB-GENE-070620-19 [details] [associations]
symbol:ftr54 "finTRIM family, member 54"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070620-19 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:BX511008 IPI:IPI00854107 Ensembl:ENSDART00000064327
OMA:MENEAPQ Bgee:F1QTC4 Uniprot:F1QTC4
Length = 445
Score = 113 (44.8 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 29 TLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICD-NSN---LSCPMCRKRLSI--W 82
T++ + + C +C +L P+ +PC H+ C+ C++R D N+N +CP CR+ +
Sbjct: 7 TVSHEELSCSICLDLLNNPVTIPCGHNYCMNCIRRHWDQNANRGVYNCPQCRQNFDARPF 66
Query: 83 LRRN 86
L RN
Sbjct: 67 LGRN 70
>UNIPROTKB|F5H012 [details] [associations]
symbol:TRIM21 "E3 ubiquitin-protein ligase TRIM21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AC009758
HGNC:HGNC:11312 IPI:IPI01012950 ProteinModelPortal:F5H012
SMR:F5H012 PRIDE:F5H012 Ensembl:ENST00000543625 ArrayExpress:F5H012
Bgee:F5H012 Uniprot:F5H012
Length = 475
Score = 113 (44.8 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 29 TLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIW-LRRNK 87
T+ + V C +C ++P+ + C H C EC+ ++ CP+CR+R + LR N+
Sbjct: 8 TMMWEEVTCPICLDPFVEPVSIECGHSFCQECISQVGKGGGSVCPVCRQRFLLKNLRPNR 67
Query: 88 DFSLLIDENL 97
+ +++ NL
Sbjct: 68 QLANMVN-NL 76
>UNIPROTKB|P19474 [details] [associations]
symbol:TRIM21 "E3 ubiquitin-protein ligase TRIM21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0031648 "protein
destabilization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0070206 "protein trimerization" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0006513 "protein monoubiquitination"
evidence=IDA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0090086 "negative regulation
of protein deubiquitination" evidence=IMP] [GO:0030529
"ribonucleoprotein complex" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 InterPro:IPR020457
Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0007049
GO:GO:0030529 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932
GO:GO:0032088 GO:GO:0004842 GO:GO:0000209 GO:GO:0070206
InterPro:IPR017907 GO:GO:0051865 GO:GO:0045787 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0031648
GO:GO:0006513 InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407
SMART:SM00589 GO:GO:0090086 PDB:2IWG PDBsum:2IWG EMBL:AC009758
CTD:6737 eggNOG:NOG276395 HOGENOM:HOG000234133 HOVERGEN:HBG001357
KO:K10651 OrthoDB:EOG4KWJSP EMBL:M34551 EMBL:U01882 EMBL:M62800
EMBL:U13658 EMBL:U13657 EMBL:AF391283 EMBL:AY742713 EMBL:BC010861
IPI:IPI00018971 IPI:IPI00969571 PIR:A55642 RefSeq:NP_003132.2
UniGene:Hs.532357 ProteinModelPortal:P19474 SMR:P19474
IntAct:P19474 MINT:MINT-1462811 STRING:P19474 PhosphoSite:P19474
DMDM:133250 PaxDb:P19474 PRIDE:P19474 DNASU:6737
Ensembl:ENST00000254436 GeneID:6737 KEGG:hsa:6737 UCSC:uc001lyy.1
GeneCards:GC11M004406 HGNC:HGNC:11312 HPA:CAB004566 HPA:HPA005673
MIM:109092 neXtProt:NX_P19474 PharmGKB:PA36136 InParanoid:P19474
OMA:IAMKRAD EvolutionaryTrace:P19474 GenomeRNAi:6737 NextBio:26280
ArrayExpress:P19474 Bgee:P19474 CleanEx:HS_TRIM21
Genevestigator:P19474 GermOnline:ENSG00000132109 Uniprot:P19474
Length = 475
Score = 113 (44.8 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 29 TLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIW-LRRNK 87
T+ + V C +C ++P+ + C H C EC+ ++ CP+CR+R + LR N+
Sbjct: 8 TMMWEEVTCPICLDPFVEPVSIECGHSFCQECISQVGKGGGSVCPVCRQRFLLKNLRPNR 67
Query: 88 DFSLLIDENL 97
+ +++ NL
Sbjct: 68 QLANMVN-NL 76
>UNIPROTKB|F1P4F7 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005657 "replication fork" evidence=IEA] [GO:0010216
"maintenance of DNA methylation" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0031493 "nucleosomal histone binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00249
SMART:SM00466 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 GO:GO:0000792
Gene3D:2.30.30.30 InterPro:IPR014722 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 OMA:HVEPGLQ InterPro:IPR021991
Pfam:PF12148 EMBL:AADN02062015 IPI:IPI00586414
Ensembl:ENSGALT00000006575 Uniprot:F1P4F7
Length = 733
Score = 115 (45.5 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLL 92
++ LC+ CQ ++ +P+ C H+VC +CL R SCP CR L K++++
Sbjct: 660 EAFLCICCQEVVFRPVTTVCQHNVCKDCLDRSFKADVYSCPACRYDLG------KNYTMQ 713
Query: 93 IDENL 97
++E L
Sbjct: 714 VNETL 718
>TAIR|locus:2086666 [details] [associations]
symbol:AT3G27330 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008166 Pfam:PF01697 IPI:IPI00542360 RefSeq:NP_189369.1
UniGene:At.5839 ProteinModelPortal:F4IWG7 SMR:F4IWG7 PRIDE:F4IWG7
EnsemblPlants:AT3G27330.1 GeneID:822354 KEGG:ath:AT3G27330
OMA:CRQLIGN ArrayExpress:F4IWG7 Uniprot:F4IWG7
Length = 913
Score = 116 (45.9 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLL 92
D + C +C I +P C H C +CL+ D CP CR+ + N +
Sbjct: 720 DELSCAICLEICFEPSTTTCGHSFCKKCLRSAADKCGRKCPKCRQLIG-----NGRYCT- 773
Query: 93 IDENLWNQIQKYYKKEVD 110
++ LWN IQ + KEV+
Sbjct: 774 VNTVLWNTIQLLFPKEVE 791
>ZFIN|ZDB-GENE-020620-2 [details] [associations]
symbol:bty "bloodthirsty" species:7955 "Danio rerio"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030218 "erythrocyte differentiation"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-020620-2
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0030218 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106862 IPI:IPI00962937
EMBL:AY454307 RefSeq:NP_001018311.1 UniGene:Dr.23709
ProteinModelPortal:Q5DSV6 PRIDE:Q5DSV6 GeneID:246711
KEGG:dre:246711 CTD:246711 NextBio:20797216 Uniprot:Q5DSV6
Length = 532
Score = 113 (44.8 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 27/90 (30%), Positives = 48/90 (53%)
Query: 25 NSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNL-SCPMCRKRLSIWL 83
+S+N L+ + + C +C + P+ PC H+ C CL + +NS SCP C++ +
Sbjct: 3 SSSNPLS-EELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSQTCSCPYCKETFT--- 58
Query: 84 RRNKDFSLLIDENLWNQIQKYYK-KEVDQK 112
+ D L I+ L +I ++YK K ++K
Sbjct: 59 -QRPD--LKINTTL-REISEHYKEKRPEEK 84
>ZFIN|ZDB-GENE-040426-2039 [details] [associations]
symbol:uhrf1 "ubiquitin-like, containing PHD and
RING finger domains, 1" species:7955 "Danio rerio" [GO:0042393
"histone binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0002088 "lens development in camera-type eye"
evidence=IMP] [GO:0031100 "organ regeneration" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS;IMP]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0000790 "nuclear
chromatin" evidence=ISS] [GO:0000791 "euchromatin" evidence=ISS]
[GO:0000792 "heterochromatin" evidence=ISS] [GO:0044729
"hemi-methylated DNA-binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00299 Prosite:PS00518
ZFIN:ZDB-GENE-040426-2039 GO:GO:0005737 GO:GO:0046872 GO:GO:0031100
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0002088
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY648713 EMBL:BX927276 EMBL:FP360035 EMBL:BC058055
IPI:IPI00497177 RefSeq:NP_998242.1 RefSeq:XP_003201004.1
UniGene:Dr.77703 PRIDE:E7EZF3 Ensembl:ENSDART00000012551
Ensembl:ENSDART00000121555 Ensembl:ENSDART00000122573
Ensembl:ENSDART00000126951 GeneID:100538017 GeneID:406350
KEGG:dre:100538017 KEGG:dre:406350 NextBio:20817968
ArrayExpress:E7EZF3 Bgee:E7EZF3 Uniprot:E7EZF3
Length = 776
Score = 115 (45.5 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 36 LCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
LC+ CQ ++ +PI C H+VC ECLQR +CP CR L
Sbjct: 705 LCICCQEVVYQPITTECQHNVCRECLQRSFKAKVYTCPACRHDL 748
>ZFIN|ZDB-GENE-070424-178 [details] [associations]
symbol:trim35-19 "tripartite motif containing
35-19" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070424-178 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 EMBL:BX927317 IPI:IPI00851981
Ensembl:ENSDART00000086151 OMA:NISEEMT Bgee:F1Q6W5 Uniprot:F1Q6W5
Length = 458
Score = 112 (44.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRIC-DNSNLSCPMCRKRLS 80
++ D + C VC I P+ L C+H VC ECLQ+ + L CP+CR RLS
Sbjct: 6 VSADELSCPVCCEIFKNPVLLSCSHSVCKECLQQFWRTKTTLECPVCR-RLS 56
>ZFIN|ZDB-GENE-080212-7 [details] [associations]
symbol:zgc:173581 "zgc:173581" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-080212-7 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 KO:K12015
HOVERGEN:HBG106862 EMBL:BC154144 IPI:IPI00877475
RefSeq:NP_001108173.1 UniGene:Dr.146601 ProteinModelPortal:A8KBK1
GeneID:100137104 KEGG:dre:100137104 NextBio:20789398 Uniprot:A8KBK1
Length = 554
Score = 113 (44.8 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 27/90 (30%), Positives = 48/90 (53%)
Query: 25 NSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNL-SCPMCRKRLSIWL 83
+S+N L+ + + C +C + P+ PC H+ C CL + +NS SCP C++ +
Sbjct: 27 SSSNPLS-EELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSQTCSCPYCKETFT--- 82
Query: 84 RRNKDFSLLIDENLWNQIQKYYK-KEVDQK 112
+ D L I+ L +I ++YK K ++K
Sbjct: 83 -QRPD--LKINTTL-REISQHYKEKRPEEK 108
>UNIPROTKB|Q8IUD6 [details] [associations]
symbol:RNF135 "E3 ubiquitin-protein ligase RNF135"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0043021 "ribonucleoprotein complex binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=IMP]
[GO:0045088 "regulation of innate immune response" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0032480 "negative regulation of type I interferon
production" evidence=TAS] [GO:0045087 "innate immune response"
evidence=TAS] InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005829 Reactome:REACT_6900 GO:GO:0046872
GO:GO:0008270 GO:GO:0045087 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0043021
EMBL:CH471147 InterPro:IPR017907 GO:GO:0045088 InterPro:IPR001870
PROSITE:PS50188 GO:GO:0032480 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GO:GO:0032728 EMBL:AC138207
Orphanet:97685 EMBL:AJ496729 EMBL:AY598332 EMBL:AB470605
EMBL:AK122646 EMBL:AK312979 EMBL:BC005084 EMBL:BC082262
EMBL:BC126420 EMBL:BC126422 IPI:IPI00216721 IPI:IPI00335645
IPI:IPI00981506 RefSeq:NP_001171921.1 RefSeq:NP_115698.3
RefSeq:NP_922921.1 UniGene:Hs.29874 HSSP:Q96PU4
ProteinModelPortal:Q8IUD6 SMR:Q8IUD6 STRING:Q8IUD6 DMDM:269849639
PRIDE:Q8IUD6 Ensembl:ENST00000324689 Ensembl:ENST00000328381
Ensembl:ENST00000535306 GeneID:84282 KEGG:hsa:84282 UCSC:uc002hfz.3
CTD:84282 GeneCards:GC17P029297 HGNC:HGNC:21158 HPA:HPA021576
MIM:611358 MIM:614192 neXtProt:NX_Q8IUD6 Orphanet:137634
PharmGKB:PA134978537 eggNOG:NOG308427 HOGENOM:HOG000059562
HOVERGEN:HBG056606 InParanoid:Q8IUD6 KO:K16272 OMA:WLYGLHP
OrthoDB:EOG49S66X PhylomeDB:Q8IUD6 ChiTaRS:RNF135 GenomeRNAi:84282
NextBio:73884 ArrayExpress:Q8IUD6 Bgee:Q8IUD6 CleanEx:HS_RNF135
Genevestigator:Q8IUD6 Uniprot:Q8IUD6
Length = 432
Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRIC---DNSNLSCPMCRK 77
L D + C++CQG+L P LPC H C CL+ + D +CP CR+
Sbjct: 14 LAEDDLGCIICQGLLDWPATLPCGHSFCRHCLEALWGARDARRWACPTCRQ 64
>RGD|621485 [details] [associations]
symbol:Rnf138 "ring finger protein 138, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=ISO] InterPro:IPR001841 InterPro:IPR015880
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 UniPathway:UPA00143
RGD:621485 Prosite:PS00518 GO:GO:0016055 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P38398 HOVERGEN:HBG074331
CTD:51444 KO:K10668 EMBL:AF315468 EMBL:BC061821 IPI:IPI00200841
RefSeq:NP_446040.1 UniGene:Rn.6814 ProteinModelPortal:Q99PD2
GeneID:94196 KEGG:rno:94196 NextBio:617854 Genevestigator:Q99PD2
Uniprot:Q99PD2
Length = 209
Score = 105 (42.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 21 NEDCNSNNTLTPDSVLCLVCQGILIKPIKLP-CNHHVCLECLQRICDNSNLSCPMCRKRL 79
+E+ +++ + T D C VCQ +L P++ C H C +C S + CP+CR
Sbjct: 2 SEELSADTSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRG-- 59
Query: 80 SIWLRRNKDFSLLID-ENLWNQI 101
S+ R ID EN+ ++
Sbjct: 60 SVTRRERACPERAIDLENIMRRV 82
>UNIPROTKB|Q99PD2 [details] [associations]
symbol:Rnf138 "E3 ubiquitin-protein ligase RNF138"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 RGD:621485 Prosite:PS00518
GO:GO:0016055 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:P38398 HOVERGEN:HBG074331 CTD:51444 KO:K10668 EMBL:AF315468
EMBL:BC061821 IPI:IPI00200841 RefSeq:NP_446040.1 UniGene:Rn.6814
ProteinModelPortal:Q99PD2 GeneID:94196 KEGG:rno:94196
NextBio:617854 Genevestigator:Q99PD2 Uniprot:Q99PD2
Length = 209
Score = 105 (42.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 21 NEDCNSNNTLTPDSVLCLVCQGILIKPIKLP-CNHHVCLECLQRICDNSNLSCPMCRKRL 79
+E+ +++ + T D C VCQ +L P++ C H C +C S + CP+CR
Sbjct: 2 SEELSADTSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRG-- 59
Query: 80 SIWLRRNKDFSLLID-ENLWNQI 101
S+ R ID EN+ ++
Sbjct: 60 SVTRRERACPERAIDLENIMRRV 82
>UNIPROTKB|F1RZ54 [details] [associations]
symbol:LOC100154127 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101808
OMA:EGRNSHV EMBL:CU311184 RefSeq:XP_001929283.1
Ensembl:ENSSSCT00000001339 GeneID:100154127 KEGG:ssc:100154127
ArrayExpress:F1RZ54 Uniprot:F1RZ54
Length = 543
Score = 104 (41.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN--LSCPMCRKRLSIW-LRRNKDF 89
D VLC +C L P+ + C H C C+ ++C+++ L C +C+ +R
Sbjct: 12 DEVLCSICLDYLRDPVTIDCGHVFCYHCIMKVCESARQPLHCSLCKTAFKTESIRHVWQM 71
Query: 90 SLLIDENLW 98
+ L+ E++W
Sbjct: 72 ASLV-ESIW 79
Score = 35 (17.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 119 GVWENYHQH 127
G+W N +QH
Sbjct: 340 GLWMNKYQH 348
Score = 34 (17.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 4/18 (22%), Positives = 14/18 (77%)
Query: 107 KEVDQKLFDQDDGVWENY 124
+E++++ + Q++G+W +
Sbjct: 424 EELEEE-WSQENGIWPKF 440
>ZFIN|ZDB-GENE-041114-35 [details] [associations]
symbol:trim35-29 "tripartite motif containing 35-29"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-041114-35 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX548254 IPI:IPI00971926 Ensembl:ENSDART00000086141
ArrayExpress:F1Q6X2 Bgee:F1Q6X2 Uniprot:F1Q6X2
Length = 450
Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 26 SNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN-LSCPMCRKRLS 80
S T++ + C VC I P+ L C+H C ECLQ+ N L CP+CR+R S
Sbjct: 4 SVKTVSVEHFSCPVCCKIYKDPVVLSCSHSFCQECLQKFWITCNTLECPVCRRRSS 59
>ZFIN|ZDB-GENE-060503-201 [details] [associations]
symbol:trim35-22 "tripartite motif containing
35-22" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060503-201 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726
KO:K12012 OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496
HOVERGEN:HBG106887 EMBL:AL954363 IPI:IPI00614033
RefSeq:NP_001038423.1 UniGene:Dr.74106 Ensembl:ENSDART00000141995
GeneID:561381 KEGG:dre:561381 NextBio:20883898 Uniprot:Q1MT11
Length = 451
Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRKRLS 80
C VC I P+ L C+H VC ECLQ+ N CP+CR+R S
Sbjct: 12 CPVCCEIFKNPVVLSCSHSVCKECLQQFWGTKNTQECPVCRRRSS 56
>ZFIN|ZDB-GENE-060929-1066 [details] [associations]
symbol:btr16 "bloodthirsty-related gene family,
member 16" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060929-1066 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CR388163 IPI:IPI00860699
Ensembl:ENSDART00000105114 ArrayExpress:E7FBX8 Bgee:E7FBX8
Uniprot:E7FBX8
Length = 536
Score = 112 (44.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 23 DCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNL-SCPMCRKRLSI 81
D + TL+ + + C +C P+ PC H+ C CL + +NS +CP+C++
Sbjct: 6 DSSQKQTLS-EELQCSICLDAFTDPVSTPCGHNFCKSCLNQCWNNSQTYNCPLCKETF-- 62
Query: 82 WLRRNKDFSLLIDENLWNQIQKY---YKKEVDQKLFDQDDGV 120
NK L I+ L +Q + + ++ + L D DGV
Sbjct: 63 ----NKKPELKINTALRQLVQVFRQNFSEKTSEVLCDICDGV 100
>ZFIN|ZDB-GENE-060825-109 [details] [associations]
symbol:btr04 "bloodthirsty-related gene family,
member 4" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-060825-109 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030144 IPI:IPI00486847
RefSeq:XP_003198956.1 UniGene:Dr.30113 Ensembl:ENSDART00000138523
GeneID:565512 KEGG:dre:565512 CTD:565512 NextBio:20885923
Bgee:F1Q9T2 Uniprot:F1Q9T2
Length = 440
Score = 110 (43.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/89 (31%), Positives = 42/89 (47%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNS-NLSCPMCRKRLSIWLRRNKDFSL 91
+ + C VC + P+ PC H+ C CL D S N +CP+C + S +R K L
Sbjct: 35 EELQCSVCLDVFTDPVSTPCGHNFCKSCLNECWDKSQNCNCPICSETFS---KRPK---L 88
Query: 92 LIDENLWNQIQKYY----KKEVDQKLFDQ 116
I+ L +Q + K EV Q + D+
Sbjct: 89 KINTTLRQVVQLFKERLSKSEVQQMIQDR 117
>UNIPROTKB|J3KSI2 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000578107
Uniprot:J3KSI2
Length = 108
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 22 EDCNSNNTLTPDSVLCLVCQGILIKPIKLP-CNHHVCLECLQRICDNSNLSCPMCR 76
ED ++ + T D C VCQ +L P++ C H C +C S CP+CR
Sbjct: 3 EDLSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCR 58
>UNIPROTKB|J3QKM8 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000580499
Uniprot:J3QKM8
Length = 142
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 22 EDCNSNNTLTPDSVLCLVCQGILIKPIKLP-CNHHVCLECLQRICDNSNLSCPMCR 76
ED ++ + T D C VCQ +L P++ C H C +C S CP+CR
Sbjct: 3 EDLSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCR 58
>ZFIN|ZDB-GENE-110920-8 [details] [associations]
symbol:trim35-20 "tripartite motif containing 35-20"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-110920-8 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX005105 IPI:IPI00931157 RefSeq:NP_001038474.1
ProteinModelPortal:F2Z4W9 Ensembl:ENSDART00000036273 GeneID:563088
KEGG:dre:563088 CTD:563088 OMA:REQITHE Uniprot:F2Z4W9
Length = 453
Score = 110 (43.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRKRLS 80
C VCQ I P+ L C+H C ECLQ+ N CP+CR+R S
Sbjct: 11 CPVCQDIFKTPVILSCSHSFCKECLQQFWKIKNTQECPVCRRRSS 55
>DICTYBASE|DDB_G0287171 [details] [associations]
symbol:DDB_G0287171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 dictyBase:DDB_G0287171
Prosite:PS00518 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AAFI02000098 KO:K15710 RefSeq:XP_637376.1
ProteinModelPortal:Q54KQ4 EnsemblProtists:DDB0233435 GeneID:8625998
KEGG:ddi:DDB_G0287171 InParanoid:Q54KQ4 OMA:QKKANEC Uniprot:Q54KQ4
Length = 1872
Score = 117 (46.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 11 SLLLVNSKMDNEDCNSNNTLTPDSVLCLVCQGILIKPI-KLPCNHHVCLEC----LQRIC 65
S L S + + N+N+T+T + +C +CQ + K + L C H C +C ++++
Sbjct: 1539 SNLSTKSNTNTNNNNNNSTVTDEKSICAICQEVFGKNVVMLLCGHSFCYDCVMFMIEKVP 1598
Query: 66 DNSNLSCPMCRKRLSI----WLRRNKDFSLLIDEN 96
+ + CP+CR R +I +L +K+ L+D +
Sbjct: 1599 NCRTIQCPICRARSNIEEISYLSTDKENGELVDNS 1633
>ZFIN|ZDB-GENE-070705-378 [details] [associations]
symbol:btr26 "bloodthirsty-related gene family,
member 26" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070705-378 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:CR853286 GeneTree:ENSGT00660000095328 EMBL:CU861574
IPI:IPI00972564 Ensembl:ENSDART00000007454 Bgee:E7F4Z1
Uniprot:E7F4Z1
Length = 559
Score = 111 (44.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 25 NSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNL-SCPMCRKRLSIWL 83
+S+ L+ D + C +C + P+ PC H+ C CL + +NS SCP C++
Sbjct: 27 SSSGPLSED-LRCSICLDVFTDPVSTPCGHNFCKICLNKCWNNSQTCSCPYCKETF---- 81
Query: 84 RRNKDFSLLIDENLWNQIQKYYKKE 108
R+ D L I+ L +I ++YK++
Sbjct: 82 RQRPD--LKINTTL-REISEHYKEK 103
>ZFIN|ZDB-GENE-060929-404 [details] [associations]
symbol:irgf4 "immunity-related GTPase family, f4"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR007743 Pfam:PF00643 Pfam:PF05049 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-060929-404 GO:GO:0005525 GO:GO:0016020 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG054304 GO:GO:0016817 EMBL:BC124194
IPI:IPI00804831 RefSeq:NP_001070079.1 UniGene:Dr.83406
ProteinModelPortal:Q08CK8 GeneID:767672 KEGG:dre:767672 CTD:767672
NextBio:20918063 Uniprot:Q08CK8
Length = 567
Score = 111 (44.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRKRLS 80
+ + C VCQ I P+ L C+H VC ECL ++ CP+CR+R S
Sbjct: 9 EELSCPVCQEIFNNPVMLSCSHSVCKECLHQLWRTKGTQECPVCRRRSS 57
>UNIPROTKB|F1NS44 [details] [associations]
symbol:F1NS44 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005720 "nuclear heterochromatin" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
InterPro:IPR021991 Pfam:PF12148 OMA:VNHNSKE EMBL:AADN02037704
EMBL:AADN02066291 EMBL:AADN02066292 EMBL:AADN02066293
EMBL:AADN02066294 EMBL:AADN02066295 EMBL:AADN02066296
EMBL:AADN02066297 EMBL:AADN02066298 EMBL:AADN02066299
IPI:IPI00589861 Ensembl:ENSGALT00000024273 Uniprot:F1NS44
Length = 755
Score = 112 (44.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 34 SVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL--SIWLRRNKDFSL 91
S +C+ CQ ++ +P+ C H+VC CLQR +CP CR L S + NK
Sbjct: 683 SFMCVCCQELVYQPVTTECLHNVCKSCLQRSFRAEVFTCPACRYDLGKSYTMVPNKILQT 742
Query: 92 LIDE 95
L+D+
Sbjct: 743 LLDQ 746
>UNIPROTKB|G4N7F0 [details] [associations]
symbol:MGG_03582 "RING-14 protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CM001234 InterPro:IPR004331 Pfam:PF03105
PROSITE:PS51382 RefSeq:XP_003716328.1 ProteinModelPortal:G4N7F0
EnsemblFungi:MGG_03582T0 GeneID:2676733 KEGG:mgr:MGG_03582
Uniprot:G4N7F0
Length = 461
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +C I P++L C H C+ C+ ++ + CPMCR+ + + D L D +
Sbjct: 366 CPICMSIAWLPVRLACRHIFCVRCVVKMQRDGKRQCPMCRQNVVM----QADLRNL-DHD 420
Query: 97 LWNQIQKYYKKEVDQK 112
L + Y+KKE +K
Sbjct: 421 LARFMGLYFKKETKEK 436
>MGI|MGI:1923718 [details] [associations]
symbol:Uhrf2 "ubiquitin-like, containing PHD and RING finger
domains 2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005720 "nuclear heterochromatin" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO;ISS]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=ISS] [GO:0042393
"histone binding" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 MGI:MGI:1923718
Prosite:PS00299 Prosite:PS00518 GO:GO:0030154 GO:GO:0071158
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 eggNOG:COG3440 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 HOGENOM:HOG000124662
HOVERGEN:HBG059298 InterPro:IPR021991 Pfam:PF12148
OrthoDB:EOG408N7M CTD:115426 KO:K15713 OMA:VNHNSKE EMBL:AB116653
EMBL:AF274047 EMBL:AK031036 EMBL:AK041564 EMBL:AK042321
EMBL:AK051743 EMBL:AK080925 EMBL:BC060241 IPI:IPI00169767
IPI:IPI00607019 IPI:IPI00757694 RefSeq:NP_659122.2
UniGene:Mm.313364 ProteinModelPortal:Q7TMI3 SMR:Q7TMI3
STRING:Q7TMI3 PhosphoSite:Q7TMI3 PRIDE:Q7TMI3
Ensembl:ENSMUST00000025739 GeneID:109113 KEGG:mmu:109113
UCSC:uc008hef.1 UCSC:uc008heh.1 UCSC:uc008hei.1 InParanoid:Q7TMI3
NextBio:361658 Bgee:Q7TMI3 Genevestigator:Q7TMI3
GermOnline:ENSMUSG00000024817 Uniprot:Q7TMI3
Length = 803
Score = 112 (44.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 34 SVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLI 93
S +C+ CQ ++ +P+ C H+VC +CLQR SCP CR L +++ +++
Sbjct: 731 SFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLG------QNYVMVL 784
Query: 94 DENLWNQIQKYY 105
+E L + ++
Sbjct: 785 NETLQTLLDLFF 796
>ZFIN|ZDB-GENE-060825-103 [details] [associations]
symbol:zgc:153151 "zgc:153151" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-060825-103
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR318603 IPI:IPI00920283
Ensembl:ENSDART00000131053 GeneTree:ENSGT00700000105241 Bgee:E7F6W7
Uniprot:E7F6W7
Length = 471
Score = 109 (43.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 28/108 (25%), Positives = 55/108 (50%)
Query: 6 VFRDVSLLLVNSKMDNEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRIC 65
V R++ + ++S + + +++ L+ + + C VC + P+ PC H+ C CL++
Sbjct: 96 VLREIVQIFMDSTKE-DPLHTDGPLS-EELQCSVCLDVFNNPVTTPCGHNYCKTCLEKCW 153
Query: 66 DNSNLS-CPMCRKRLSIWLRRNKDFSLLIDENLWNQIQKYYKKEVDQK 112
D S++ CP C++ S N+ L + L +I + Y+K D K
Sbjct: 154 DYSHVCICPYCKETFS-----NRP-DLKCNTAL-REIVQLYEKNTDYK 194
Score = 102 (41.0 bits), Expect = 0.00046, P = 0.00046
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNS-NLSCPMCRKRLS 80
C VC + P+ PC H+ C CL + DNS + CP+C++ S
Sbjct: 42 CPVCLDVFTDPVTTPCGHNFCKTCLIQCWDNSQDYRCPLCKETFS 86
>SGD|S000005415 [details] [associations]
symbol:PSH1 "E3 ubiquitin ligase targeting centromere-binding
protein Cse4p" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IMP;IDA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 SGD:S000005415 Prosite:PS00518
GO:GO:0005634 GO:GO:0000775 EMBL:BK006948 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:X91067
GO:GO:0004842 InterPro:IPR017907 GO:GO:0042787 EMBL:Z74796
PIR:S59296 RefSeq:NP_014587.1 ProteinModelPortal:Q12161 SMR:Q12161
DIP:DIP-6481N IntAct:Q12161 MINT:MINT-666688 STRING:Q12161
PaxDb:Q12161 EnsemblFungi:YOL054W GeneID:854102 KEGG:sce:YOL054W
CYGD:YOL054w eggNOG:NOG307017 HOGENOM:HOG000065994 OMA:ICHDYMF
OrthoDB:EOG4R53CF NextBio:975777 Genevestigator:Q12161
GermOnline:YOL054W Uniprot:Q12161
Length = 406
Score = 108 (43.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/92 (27%), Positives = 45/92 (48%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQR-ICDNSN--LSCPMCRKRLSIWLRRN--- 86
+S++C +C + P+ PC H+ C CL N+ L+CP CR ++ N
Sbjct: 26 ESLVCSICHDYMFVPMMTPCGHNYCYGCLNTWFASNTQKELACPQCRSDITTIPALNTTL 85
Query: 87 KDFSLLIDENLWNQIQKYYKKEVDQKLFDQDD 118
+ + I E L +Q + +KK + K +++D
Sbjct: 86 QQYLSFILEKLRDQNDESFKKLLTTKTKEEND 117
>UNIPROTKB|C9JI91 [details] [associations]
symbol:TRIM56 "E3 ubiquitin-protein ligase TRIM56"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC105446 IPI:IPI00871506
HGNC:HGNC:19028 ChiTaRS:TRIM56 ProteinModelPortal:C9JI91 SMR:C9JI91
STRING:C9JI91 Ensembl:ENST00000412507 UCSC:uc003uxr.3 OMA:CEICRET
ArrayExpress:C9JI91 Bgee:C9JI91 Uniprot:C9JI91
Length = 305
Score = 106 (42.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSI 81
L+ D + C +C L P LPC H C +CL ++ D + CP CR+ + +
Sbjct: 14 LSSDFLACKICLEQLRAPKTLPCLHTYCQDCLAQLADGGRVRCPECRETVPV 65
>ZFIN|ZDB-GENE-060421-7499 [details] [associations]
symbol:zgc:136767 "zgc:136767" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-060421-7499 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
HOVERGEN:HBG106887 EMBL:BC115258 IPI:IPI00758686
RefSeq:NP_001035457.1 UniGene:Dr.153696 ProteinModelPortal:Q1RLW2
GeneID:678620 KEGG:dre:678620 NextBio:20902439 Uniprot:Q1RLW2
Length = 356
Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 28 NTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRKRLS 80
++ + + + C VCQ I P L C H C ECLQ N+ CP+CR++ S
Sbjct: 2 DSASAEDLTCPVCQEIFKDPFVLTCKHKYCTECLQSFWINTESKRCPLCRRKSS 55
>TAIR|locus:2035025 [details] [associations]
symbol:AT1G18660 species:3702 "Arabidopsis thaliana"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 Pfam:PF02190 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 IPI:IPI00522616 RefSeq:NP_973859.1
UniGene:At.20365 UniGene:At.67116 ProteinModelPortal:F4ICB5
SMR:F4ICB5 PRIDE:F4ICB5 EnsemblPlants:AT1G18660.4 GeneID:838447
KEGG:ath:AT1G18660 OMA:EVEITEC Uniprot:F4ICB5
Length = 491
Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLL 92
D C VC +L +P PC H C CL + D N CP+CR + + R +
Sbjct: 192 DDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDRGN-KCPLCRTVIFMTPR-----TCA 245
Query: 93 IDENLWNQIQKYYKKEVDQKLFDQD 117
+ L N I+K + +E ++ +QD
Sbjct: 246 VSVTLNNIIEKNFPEEYAERKSEQD 270
>UNIPROTKB|A5HUK4 [details] [associations]
symbol:TRIM27.1 "Tripartite motif protein 27" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:AB268588 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00690000101808 CTD:5987 OrthoDB:EOG4BCDMW
EMBL:AADN02030124 eggNOG:NOG265106 IPI:IPI00584596
RefSeq:NP_001025842.2 UniGene:Gga.10379 Ensembl:ENSGALT00000000147
GeneID:417042 KEGG:gga:417042 InParanoid:A5HUK4 OMA:RIVCEFE
NextBio:20820421 Uniprot:A5HUK4
Length = 495
Score = 109 (43.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDN--SNLSCPMCRK 77
C +C G P+ +PC H+ C EC+ R + N CP CRK
Sbjct: 16 CSICLGYFQDPVSIPCGHNFCRECIARCWEGLEGNFPCPQCRK 58
>ZFIN|ZDB-GENE-070912-226 [details] [associations]
symbol:ftr04 "finTRIM family, member 4"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-226 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:BX572635 GeneTree:ENSGT00670000097622 IPI:IPI00868271
Ensembl:ENSDART00000134034 Uniprot:F1QJ43
Length = 361
Score = 107 (42.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN----LSCPMCRK 77
L D C VCQ +L P+ +PC H C+ C+ D SCP CR+
Sbjct: 23 LAQDQFRCSVCQDLLKDPVAIPCGHSYCMSCISGYWDQDEQKGVYSCPQCRQ 74
>UNIPROTKB|F1MFX7 [details] [associations]
symbol:F1MFX7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071158 "positive regulation of cell cycle arrest"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
InterPro:IPR021991 Pfam:PF12148 OMA:VNHNSKE EMBL:DAAA02022659
EMBL:DAAA02022660 EMBL:DAAA02022661 IPI:IPI00687692
Ensembl:ENSBTAT00000027737 Uniprot:F1MFX7
Length = 752
Score = 111 (44.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 34 SVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
S +C+ CQ ++ +P+ C H+VC +CLQR SCP CR L
Sbjct: 680 SFMCVCCQELVYQPVTTDCLHNVCKDCLQRSFKAQVFSCPACRHDL 725
>ZFIN|ZDB-GENE-070424-161 [details] [associations]
symbol:ftr55 "finTRIM family, member 55"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070424-161 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:BX322664
GeneTree:ENSGT00670000097622 IPI:IPI00630920
Ensembl:ENSDART00000019843 Uniprot:F1Q547
Length = 531
Score = 109 (43.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 29 TLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNL-SCPMCRK 77
+++ + +C VC +L P+ +PC H C+ C+ D ++ SCP CR+
Sbjct: 5 SVSEEQFVCPVCLDLLKDPVTIPCGHSYCMSCITEFWDQKSIYSCPQCRQ 54
>UNIPROTKB|Q96PU4 [details] [associations]
symbol:UHRF2 "E3 ubiquitin-protein ligase UHRF2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071158 "positive regulation of cell cycle arrest"
evidence=IDA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IEP] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEP] [GO:0051726 "regulation of cell cycle" evidence=TAS]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0003677 GO:GO:0008283 GO:GO:0008270 GO:GO:0005720
GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 EMBL:AL353718 eggNOG:COG3440 Gene3D:2.30.280.10
HOGENOM:HOG000124662 HOVERGEN:HBG059298 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M EMBL:AB071698 EMBL:AF274049
EMBL:AL133480 EMBL:BC028397 EMBL:AL137728 IPI:IPI00044681
IPI:IPI00395464 RefSeq:NP_690856.1 UniGene:Hs.493401 PDB:1WY8
PDB:1Z6U PDB:2E6S PDB:3OLN PDBsum:1WY8 PDBsum:1Z6U PDBsum:2E6S
PDBsum:3OLN ProteinModelPortal:Q96PU4 SMR:Q96PU4 IntAct:Q96PU4
MINT:MINT-1196856 STRING:Q96PU4 PhosphoSite:Q96PU4 DMDM:67462076
PaxDb:Q96PU4 PeptideAtlas:Q96PU4 PRIDE:Q96PU4 DNASU:115426
Ensembl:ENST00000276893 Ensembl:ENST00000450508
Ensembl:ENST00000468435 GeneID:115426 KEGG:hsa:115426
UCSC:uc003zjy.3 CTD:115426 GeneCards:GC09P006405 HGNC:HGNC:12557
HPA:HPA026633 HPA:HPA026697 neXtProt:NX_Q96PU4 PharmGKB:PA37197
InParanoid:Q96PU4 KO:K15713 OMA:VNHNSKE ChiTaRS:UHRF2
EvolutionaryTrace:Q96PU4 GenomeRNAi:115426 NextBio:79598
ArrayExpress:Q96PU4 Bgee:Q96PU4 CleanEx:HS_UHRF2
Genevestigator:Q96PU4 GermOnline:ENSG00000147854 Uniprot:Q96PU4
Length = 802
Score = 111 (44.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 34 SVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
S +C+ CQ ++ +P+ C H+VC +CLQR SCP CR L
Sbjct: 730 SFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDL 775
>UNIPROTKB|E2RKA4 [details] [associations]
symbol:UHRF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071158 "positive regulation of cell cycle
arrest" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0051865
Gene3D:2.30.30.30 InterPro:IPR014722 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 InterPro:IPR021991 Pfam:PF12148
CTD:115426 KO:K15713 OMA:VNHNSKE EMBL:AAEX03007831
RefSeq:XP_864420.2 ProteinModelPortal:E2RKA4
Ensembl:ENSCAFT00000002134 GeneID:474702 KEGG:cfa:474702
NextBio:20850676 Uniprot:E2RKA4
Length = 803
Score = 111 (44.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 34 SVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
S +C+ CQ ++ +P+ C H+VC +CLQR SCP CR L
Sbjct: 731 SFMCVCCQELVYQPVTTDCLHNVCKDCLQRSFKAQVFSCPACRHDL 776
>RGD|1309990 [details] [associations]
symbol:Uhrf2 "ubiquitin-like with PHD and ring finger domains 2,
E3 ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005720 "nuclear
heterochromatin" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0071158
"positive regulation of cell cycle arrest" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 RGD:1309990
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0008283 GO:GO:0008270 GO:GO:0005720 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511
GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0051865 Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:CH473953
Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M CTD:115426 KO:K15713 IPI:IPI00213897
RefSeq:NP_001101055.1 UniGene:Rn.2173 Ensembl:ENSRNOT00000015406
GeneID:309331 KEGG:rno:309331 UCSC:RGD:1309990 NextBio:660596
Uniprot:D3ZK36
Length = 803
Score = 111 (44.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 34 SVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
S +C+ CQ ++ +P+ C H+VC +CLQR SCP CR L
Sbjct: 731 SFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDL 776
>UNIPROTKB|C9J8A5 [details] [associations]
symbol:TRIM10 "Tripartite motif-containing protein 10"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:AL671859 HOGENOM:HOG000234133 eggNOG:NOG301877 EMBL:AL844220
EMBL:BX005441 EMBL:BX927221 EMBL:CR753815 EMBL:CR759838
EMBL:CR788282 HGNC:HGNC:10072 ChiTaRS:TRIM10 IPI:IPI00872419
SMR:C9J8A5 Ensembl:ENST00000546716 Ensembl:ENST00000548533
Ensembl:ENST00000548891 Ensembl:ENST00000551474
Ensembl:ENST00000551591 Ensembl:ENST00000553004
Ensembl:ENST00000553167 Uniprot:C9J8A5
Length = 481
Score = 108 (43.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 29 TLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICD------NSNLSCPMCRK 77
T D V C +CQG L +P+ + C H+ C CL R C+ + +CP+C++
Sbjct: 8 TSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKE 62
>UNIPROTKB|Q9UDY6 [details] [associations]
symbol:TRIM10 "Tripartite motif-containing protein 10"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030218 "erythrocyte differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 EMBL:BA000025 EMBL:CH471081 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0030218
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:AL669914 EMBL:AL671859 HOGENOM:HOG000234133 HOVERGEN:HBG001357
CTD:10107 eggNOG:NOG301877 KO:K12002 OrthoDB:EOG4BG8W2 EMBL:Y07829
EMBL:AF220122 EMBL:AF220123 EMBL:AB202085 EMBL:AB103595
EMBL:AB088089 EMBL:AL844220 EMBL:BX005441 EMBL:BX927221
EMBL:CR753815 EMBL:CR759838 EMBL:CR788282 EMBL:BC093926
EMBL:BC113419 IPI:IPI00009524 IPI:IPI00216582 RefSeq:NP_006769.2
RefSeq:NP_439893.2 UniGene:Hs.709483 ProteinModelPortal:Q9UDY6
SMR:Q9UDY6 IntAct:Q9UDY6 STRING:Q9UDY6 PhosphoSite:Q9UDY6
DMDM:50403805 PRIDE:Q9UDY6 Ensembl:ENST00000259941
Ensembl:ENST00000354038 Ensembl:ENST00000376704
Ensembl:ENST00000413055 Ensembl:ENST00000416714
Ensembl:ENST00000417411 Ensembl:ENST00000426996
Ensembl:ENST00000428611 Ensembl:ENST00000431258
Ensembl:ENST00000446013 Ensembl:ENST00000447465
Ensembl:ENST00000448645 Ensembl:ENST00000449208
Ensembl:ENST00000449742 Ensembl:ENST00000451727
Ensembl:ENST00000456988 GeneID:10107 KEGG:hsa:10107 UCSC:uc003npo.3
GeneCards:GC06M030119 H-InvDB:HIX0032788 HGNC:HGNC:10072
HPA:HPA043325 MIM:605701 neXtProt:NX_Q9UDY6 PharmGKB:PA35536
InParanoid:Q9UDY6 OMA:EEPPTCP ChiTaRS:TRIM10 GenomeRNAi:10107
NextBio:38229 ArrayExpress:Q9UDY6 Bgee:Q9UDY6 CleanEx:HS_TRIM10
Genevestigator:Q9UDY6 GermOnline:ENSG00000204613 Uniprot:Q9UDY6
Length = 481
Score = 108 (43.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 29 TLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICD------NSNLSCPMCRK 77
T D V C +CQG L +P+ + C H+ C CL R C+ + +CP+C++
Sbjct: 8 TSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKE 62
>ZFIN|ZDB-GENE-060616-101 [details] [associations]
symbol:trim109 "tripartite motif containing 109"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-060616-101 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 eggNOG:NOG274496 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00700000104222 EMBL:BX005429 EMBL:BC117661
IPI:IPI00770923 RefSeq:NP_001038768.1 UniGene:Dr.108525
Ensembl:ENSDART00000090234 GeneID:723998 KEGG:dre:723998 CTD:723998
HOGENOM:HOG000123639 HOVERGEN:HBG096489 InParanoid:Q1ECU9
OMA:EMHQFLR OrthoDB:EOG4XH025 NextBio:20902619 Uniprot:Q1ECU9
Length = 497
Score = 108 (43.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 35 VLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRKRLSIW-LRRNK 87
+ C VC G P+ L C+H C +C+ +S L CP CR+ ++W LR N+
Sbjct: 9 IQCSVCLGDFTDPVSLLCDHTFCRQCISNHSQSSRLRLCPECRRPYTMWDLRSNR 63
>RGD|1308607 [details] [associations]
symbol:Trim31 "tripartite motif-containing 31" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 RGD:1308607
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 OrthoDB:EOG4K0QNJ
GeneTree:ENSGT00700000104499 IPI:IPI00768380
Ensembl:ENSRNOT00000061558 UCSC:RGD:1308607 Uniprot:D3ZN56
Length = 508
Score = 108 (43.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNS-NLSCPMCRKRLSI-WLRRNKDFS 90
+ V C +C IL P+ + C H+ CL+C+ +I S N+ CP+C+ +S R NK +
Sbjct: 12 EDVTCPICLEILQDPVTIDCGHNFCLKCINQIGKTSENILCPLCKCSVSKNTFRPNKLLA 71
Query: 91 LLIDE 95
L ++
Sbjct: 72 SLAEK 76
>UNIPROTKB|Q6PJ69 [details] [associations]
symbol:TRIM65 "Tripartite motif-containing protein 65"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 EMBL:AC087289 HSSP:P29590
EMBL:BC006138 EMBL:BC021259 EMBL:BC073831 EMBL:BC098412
IPI:IPI00419451 RefSeq:NP_001243053.1 RefSeq:NP_775818.2
UniGene:Hs.189823 ProteinModelPortal:Q6PJ69 SMR:Q6PJ69
IntAct:Q6PJ69 PhosphoSite:Q6PJ69 DMDM:296453004 PaxDb:Q6PJ69
PRIDE:Q6PJ69 Ensembl:ENST00000269383 GeneID:201292 KEGG:hsa:201292
UCSC:uc002jpx.3 CTD:201292 GeneCards:GC17M073885 H-InvDB:HIX0014178
HGNC:HGNC:27316 HPA:HPA021575 HPA:HPA021578 neXtProt:NX_Q6PJ69
PharmGKB:PA134877726 eggNOG:NOG306486 HOGENOM:HOG000231106
HOVERGEN:HBG080119 InParanoid:Q6PJ69 KO:K12031 OMA:QPLYTFH
OrthoDB:EOG4XD3R1 PhylomeDB:Q6PJ69 GenomeRNAi:201292 NextBio:90125
Bgee:Q6PJ69 CleanEx:HS_TRIM65 Genevestigator:Q6PJ69
GermOnline:ENSG00000141569 Uniprot:Q6PJ69
Length = 517
Score = 108 (43.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL--SIWLRRNK 87
L + + C +C G+ P+ LPC H+ C C++ D +CP CR+ LRRN
Sbjct: 5 LLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKACPECREPFPDGAELRRNV 64
Query: 88 DFSLLID 94
S +++
Sbjct: 65 ALSGVLE 71
>ZFIN|ZDB-GENE-080213-8 [details] [associations]
symbol:zgc:172170 "zgc:172170" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-080213-8 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106887 EMBL:BC154568
IPI:IPI00882698 RefSeq:NP_001108175.1 UniGene:Dr.154576
ProteinModelPortal:A8WG40 GeneID:100137106 KEGG:dre:100137106
NextBio:20789400 Uniprot:A8WG40
Length = 453
Score = 107 (42.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 35 VLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNL-SCPMCRKRLS 80
++C VC I P+ L C+H C ECLQ+ + N CP+CR++ S
Sbjct: 9 LICPVCHEIFKTPVILSCSHSFCQECLQQFWRSKNTRECPVCRRKSS 55
>ZFIN|ZDB-GENE-040426-1620 [details] [associations]
symbol:rnf180 "ring finger protein 180"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-040426-1620 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:BC054692 IPI:IPI00770338 UniGene:Dr.78834
ProteinModelPortal:Q7SYK3 HOVERGEN:HBG097904 InParanoid:Q7SYK3
ArrayExpress:Q7SYK3 Uniprot:Q7SYK3
Length = 458
Score = 107 (42.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 21/51 (41%), Positives = 26/51 (50%)
Query: 33 DSVLCLVCQGILIKPIKL-PCNHHVCLECLQRICDN--SNLSCPMCRKRLS 80
D C VC + P K PCNH C CL+ + N SN CP+CR +S
Sbjct: 296 DGYTCAVCLDVYYSPYKCHPCNHVFCEPCLRTLAKNRPSNTPCPLCRTLIS 346
>WB|WBGene00022502 [details] [associations]
symbol:ZC13.1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG329292 GeneTree:ENSGT00390000014213
EMBL:FO081302 GeneID:180437 KEGG:cel:CELE_ZC13.1 CTD:180437
RefSeq:NP_001024970.1 ProteinModelPortal:Q7JNM2 SMR:Q7JNM2
PaxDb:Q7JNM2 PRIDE:Q7JNM2 EnsemblMetazoa:ZC13.1b UCSC:ZC13.1b
WormBase:ZC13.1b HOGENOM:HOG000018464 InParanoid:Q7JNM2 OMA:DFEFSNT
NextBio:909368 ArrayExpress:Q7JNM2 Uniprot:Q7JNM2
Length = 398
Score = 106 (42.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLS 80
C VC G L++PIKL C H C C++ D + +CP+CR ++
Sbjct: 337 CAVCHGDLLQPIKLECTHVFCKFCIETWLDQKS-TCPICRAEVT 379
>TAIR|locus:2087278 [details] [associations]
symbol:PRT1 "proteolysis 1" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=TAS] InterPro:IPR001841 InterPro:IPR000433
Pfam:PF00569 PROSITE:PS01357 PROSITE:PS50089 PROSITE:PS50135
SMART:SM00184 SMART:SM00291 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG251630
EMBL:AB028609 EMBL:AJ224306 EMBL:AJ224307 EMBL:AY080799
EMBL:AY114077 EMBL:AY087139 IPI:IPI00532279 PIR:T52193
RefSeq:NP_189124.1 UniGene:At.77 ProteinModelPortal:Q8LBL5
SMR:Q8LBL5 STRING:Q8LBL5 PRIDE:Q8LBL5 EnsemblPlants:AT3G24800.1
GeneID:822078 KEGG:ath:AT3G24800 GeneFarm:4910 TAIR:At3g24800
HOGENOM:HOG000030197 InParanoid:Q8LBL5 OMA:VCLELLY PhylomeDB:Q8LBL5
ProtClustDB:CLSN2915347 Genevestigator:Q8LBL5 GermOnline:AT3G24800
Uniprot:Q8LBL5
Length = 410
Score = 106 (42.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 19 MDNEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCR 76
M N++ S PD LC VC +L KPI L C H C C+ + + S CP+CR
Sbjct: 10 MKNDE--SQEEEIPDQFLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNGFRESHCPICR 66
>UNIPROTKB|F1RKW3 [details] [associations]
symbol:RNF135 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045088 "regulation of innate immune response"
evidence=IEA] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IEA] [GO:0032728 "positive regulation of interferon-beta
production" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0043021 InterPro:IPR017907
GO:GO:0045088 InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0032728
KO:K16272 OMA:WLYGLHP GeneTree:ENSGT00650000093365 EMBL:CU640398
RefSeq:XP_003131783.1 UniGene:Ssc.10766 Ensembl:ENSSSCT00000019304
GeneID:100522211 KEGG:ssc:100522211 Uniprot:F1RKW3
Length = 423
Score = 106 (42.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICD-NSNLSCPMCRK--RLSIWLRRN 86
L D + C++C +L P LPC H C +CL + + SCP CR+ + LR+N
Sbjct: 14 LAEDDLGCIICHELLAWPTTLPCGHSFCRDCLVGLWEAGRRRSCPTCREGGAQPLQLRKN 73
Query: 87 KDFSLLIDE 95
L D+
Sbjct: 74 TMLQDLADK 82
>UNIPROTKB|D6RAH9 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:AC058822 EMBL:AC095040
HGNC:HGNC:6657 EMBL:AC124017 IPI:IPI00966985
ProteinModelPortal:D6RAH9 SMR:D6RAH9 Ensembl:ENST00000510143
HOGENOM:HOG000207449 ArrayExpress:D6RAH9 Bgee:D6RAH9 Uniprot:D6RAH9
Length = 99
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLL 92
D ++C +C L+ P+ PC H C CL + CPM RK L L+ K S+L
Sbjct: 37 DDLICHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDF-CPMDRKPLV--LQHCKKSSIL 93
Query: 93 IDENL 97
+++ L
Sbjct: 94 VNKLL 98
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 22/85 (25%), Positives = 41/85 (48%)
Query: 28 NTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNK 87
N + + + C++C I+ + L C H C C+ + CP+CRK + ++K
Sbjct: 44 NDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRK-VECPICRKDI-----KSK 97
Query: 88 DFSLLIDENLWNQIQKYYKKEVDQK 112
SL++D N N++ EV ++
Sbjct: 98 THSLVLD-NCINKMVDNLSSEVKER 121
>ZFIN|ZDB-GENE-070912-229 [details] [associations]
symbol:ftr07 "finTRIM family, member 7"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-229 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:BX572635 GeneTree:ENSGT00670000097622 IPI:IPI00482574
RefSeq:XP_698750.3 UniGene:Dr.152968 Ensembl:ENSDART00000022008
GeneID:570209 KEGG:dre:570209 CTD:570209 NextBio:20890028
Uniprot:F1R523
Length = 541
Score = 107 (42.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 26 SNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICD----NSNLSCPMCRK 77
S+ +L D C VC +L P+ +PC H C+ C+ D N SCP CR+
Sbjct: 4 SSGSLAQDQFSCSVCLDLLKDPVTIPCGHSYCMSCISDCWDQDEQNGVYSCPHCRQ 59
>ZFIN|ZDB-GENE-060929-548 [details] [associations]
symbol:btr12 "bloodthirsty-related gene family,
member 12" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060929-548 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 HOVERGEN:HBG106862
GeneTree:ENSGT00660000095328 EMBL:BX664721 EMBL:BC124441
IPI:IPI00800043 RefSeq:NP_001070087.1 UniGene:Dr.87957
Ensembl:ENSDART00000110769 GeneID:767681 KEGG:dre:767681 CTD:767681
eggNOG:NOG331569 InParanoid:Q08C26 OrthoDB:EOG4640BN
NextBio:20918071 Uniprot:Q08C26
Length = 562
Score = 107 (42.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN-LSCPMCRKRLS 80
L+ + C +C + ++P+ PC H C CL+ ++S CPMC+K S
Sbjct: 11 LSEEQFSCSICLEVFVEPVSTPCGHTFCKACLEGFWNHSKRFLCPMCKKTFS 62
>ZFIN|ZDB-GENE-081031-80 [details] [associations]
symbol:btr21 "bloodthirsty-related gene family,
member 21" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081031-80 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 GeneTree:ENSGT00660000095328 EMBL:CT030005
IPI:IPI00608496 Ensembl:ENSDART00000131989 Uniprot:F6P534
Length = 563
Score = 107 (42.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNS-NLSCPMCRKRLSIWLRRNKDFSL 91
+ + C VC + P+ PC H+ C CL + + S N SCP C++ + + D L
Sbjct: 32 EDLQCSVCLDVFTDPVSTPCGHNFCRSCLNKCWNKSWNYSCPNCKETFT----QRPD--L 85
Query: 92 LIDENLWNQIQKYYKKE 108
I+ +L +I ++YK++
Sbjct: 86 KINTSL-REISEHYKEK 101
>UNIPROTKB|H0YGS7 [details] [associations]
symbol:TRIM65 "Tripartite motif-containing protein 65"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC087289 HGNC:HGNC:27316
Ensembl:ENST00000540128 Uniprot:H0YGS7
Length = 244
Score = 104 (41.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL--SIWLRRNKDFSLLID 94
C +C G+ P+ LPC H+ C C++ D +CP CR+ LRRN S +++
Sbjct: 4 CAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKACPECREPFPDGAELRRNVALSGVLE 63
>ZFIN|ZDB-GENE-070912-318 [details] [associations]
symbol:ftr27 "finTRIM family, member 27"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-070912-318 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:KOG2177 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 EMBL:BX548047
IPI:IPI00862890 UniGene:Dr.88749 Ensembl:ENSDART00000135584
OMA:YESHEES Uniprot:B0S6S1
Length = 171
Score = 102 (41.0 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 29 TLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS---CPMCRKRLSIWLRR 85
++ D C +C +L P+ +PC H C+ C+ + +LS CP CR+ +
Sbjct: 7 SVAQDQFSCSICLDLLKDPVTIPCGHSYCMNCITEYWNRRDLSINSCPQCRQTFTPKPAL 66
Query: 86 NKDFSL 91
NK+ L
Sbjct: 67 NKNVML 72
>RGD|1566174 [details] [associations]
symbol:Trim58 "tripartite motif-containing 58" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
RGD:1566174 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 CTD:25893 KO:K12027 OrthoDB:EOG4J6RQS
OMA:EVIVGER IPI:IPI00562344 RefSeq:NP_001178570.1 UniGene:Rn.226972
ProteinModelPortal:D3ZYF5 Ensembl:ENSRNOT00000047700 GeneID:303167
KEGG:rno:303167 UCSC:RGD:1566174 NextBio:650775 Uniprot:D3ZYF5
Length = 485
Score = 106 (42.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSN-----LSCPMCRK--RLSIWLRRNKDF 89
C VC L +PI + C H CL C+ +C+ S+ +CP CR R S + R N+
Sbjct: 15 CSVCLDFLQEPISVDCGHSFCLRCISELCEKSDSAQGVYACPQCRGPFRPSSF-RPNRQL 73
Query: 90 SLLID 94
+ L+D
Sbjct: 74 ASLVD 78
>FB|FBgn0052369 [details] [associations]
symbol:CG32369 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028
SMART:SM00184 Prosite:PS00518 EMBL:AE014296 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
FlyBase:FBgn0052369 UniGene:Dm.33514 GeneID:38873
KEGG:dme:Dmel_CG32369 GenomeRNAi:38873 NextBio:810801
RefSeq:NP_001246660.1 RefSeq:NP_729296.1 ProteinModelPortal:Q9VSB2
SMR:Q9VSB2 MINT:MINT-298560 EnsemblMetazoa:FBtr0076783
EnsemblMetazoa:FBtr0304992 UCSC:CG32369-RA InParanoid:Q9VSB2
OMA:VEYICDE PhylomeDB:Q9VSB2 ArrayExpress:Q9VSB2 Bgee:Q9VSB2
Uniprot:Q9VSB2
Length = 1066
Score = 110 (43.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
C+VC L KP+ PC H CL CL R C + N CP+C L
Sbjct: 688 CVVCSRTLWKPVVTPCGHTYCLVCLDR-CMDYNSPCPLCMSPL 729
>UNIPROTKB|E1BD59 [details] [associations]
symbol:TRIM56 "E3 ubiquitin-protein ligase TRIM56"
species:9913 "Bos taurus" [GO:0032608 "interferon-beta production"
evidence=ISS] [GO:0034340 "response to type I interferon"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0051607
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 GO:GO:0034340 GO:GO:0032608
EMBL:AAFC03118057 IPI:IPI01000920 UniGene:Bt.21963 Uniprot:E1BD59
Length = 732
Score = 108 (43.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSI 81
L+ D + C +C L P LPC H C +CL ++ + S L CP CR+ + +
Sbjct: 14 LSSDFLACKICLEQLRVPKTLPCLHTYCQDCLAQLAEGSRLRCPECRESVPV 65
>UNIPROTKB|G5E5F1 [details] [associations]
symbol:TRIM56 "E3 ubiquitin-protein ligase TRIM56"
species:9913 "Bos taurus" [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0051607 "defense response to
virus" evidence=IEA] [GO:0034340 "response to type I interferon"
evidence=IEA] [GO:0032608 "interferon-beta production"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0051607
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 GeneTree:ENSGT00550000074377
GO:GO:0034340 GO:GO:0032608 EMBL:DAAA02058268
Ensembl:ENSBTAT00000015969 OMA:SNGTIHV Uniprot:G5E5F1
Length = 732
Score = 108 (43.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSI 81
L+ D + C +C L P LPC H C +CL ++ + S L CP CR+ + +
Sbjct: 14 LSSDFLACKICLEQLRVPKTLPCLHTYCQDCLAQLAEGSRLRCPECRESVPV 65
>UNIPROTKB|D4A339 [details] [associations]
symbol:Trim47l "Protein Trim47l" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 OMA:RLCKNVI OrthoDB:EOG4R23TJ IPI:IPI00608170
Ensembl:ENSRNOT00000040703 RGD:1311352 Uniprot:D4A339
Length = 623
Score = 107 (42.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 25 NSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNS-----NLSCPMCRK 77
NS+ L D VLC +C + P+ C H+ C+ CLQ D+ CP CR+
Sbjct: 59 NSSQHLLEDQVLCPICLDVFRNPVTTACGHNFCMTCLQSFWDHQADTGETYYCPQCRE 116
>UNIPROTKB|F1LMT9 [details] [associations]
symbol:Trim47l "Protein Trim47l" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 GeneTree:ENSGT00700000104280 RGD:1311352
IPI:IPI00948827 RefSeq:XP_001073650.1 RefSeq:XP_001081685.1
UniGene:Rn.198897 Ensembl:ENSRNOT00000065292 GeneID:287824
KEGG:rno:287824 CTD:287824 NextBio:627093 Uniprot:F1LMT9
Length = 623
Score = 107 (42.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 25 NSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNS-----NLSCPMCRK 77
NS+ L D VLC +C + P+ C H+ C+ CLQ D+ CP CR+
Sbjct: 59 NSSQHLLEDQVLCPICLDVFRNPVTTACGHNFCMTCLQSFWDHQADTGETYYCPQCRE 116
>UNIPROTKB|E2QTX3 [details] [associations]
symbol:RFPL4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099707
EMBL:AAEX03008622 Ensembl:ENSCAFT00000006485 OMA:LRKVQCG
Uniprot:E2QTX3
Length = 270
Score = 100 (40.3 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQR-ICDNSNL--SCPMCR 76
+ V C +C I PI L C+H C C+QR + ++ +L +CPMCR
Sbjct: 7 EEVTCPICLEIFYCPILLSCDHIFCFHCMQRWVLEHRDLKSACPMCR 53
Score = 34 (17.0 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 112 KLFDQDDGVWENYHQHIS 129
K FD D H H+S
Sbjct: 226 KFFDVGDNALIYTHDHVS 243
>ZFIN|ZDB-GENE-060503-484 [details] [associations]
symbol:trim35-25 "tripartite motif containing
35-25" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060503-484 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887 EMBL:AL954363
IPI:IPI00785705 Ensembl:ENSDART00000133133 Uniprot:Q1MT08
Length = 448
Score = 105 (42.0 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRIC-DNSNLSCPMCRKRLS 80
+ + C VC I P+ L C+H VC ECLQ+ + CP+CR+R S
Sbjct: 8 EDLSCPVCCEIFKNPVVLSCSHSVCKECLQQYWRTKTTQECPVCRRRSS 56
>UNIPROTKB|A2AAZ5 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 HOGENOM:HOG000234134
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00796458 SMR:A2AAZ5 Ensembl:ENST00000411711
Ensembl:ENST00000416213 Ensembl:ENST00000424571
Ensembl:ENST00000430414 Ensembl:ENST00000453856
Ensembl:ENST00000456425 Ensembl:ENST00000458516 Uniprot:A2AAZ5
Length = 144
Score = 99 (39.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDN--SNLSCPMCRKRLSIW-LRRNKDFSLLI 93
C VC L +P+ + C H+ C C+ R ++ + CP+CRK LR N+ ++
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMV 88
Query: 94 DENLWNQIQKYYKKEVDQKLFDQ 116
+ + Q+Q +K D+ L Q
Sbjct: 89 E--IAKQLQAVKRKIRDESLCPQ 109
>ZFIN|ZDB-GENE-061009-3 [details] [associations]
symbol:trim35-31 "tripartite motif containing 35-31"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-061009-3 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:FP016234 IPI:IPI00627838 Ensembl:ENSDART00000057464
Bgee:F1Q8S8 Uniprot:F1Q8S8
Length = 455
Score = 105 (42.0 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 29 TLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLS-CPMCRKRLSIWLRRNK 87
+L+ ++ C +C I P+ L C+H C ECLQ+ ++ CP+CR+R S R+
Sbjct: 3 SLSEENFSCPICHEIFKDPVVLSCSHSFCRECLQQYWRAVDIQECPVCRRRSS----RDD 58
Query: 88 DFSLLIDENLWNQIQKYYKKE 108
+ L+ +NL K K++
Sbjct: 59 PPNNLVLKNLCESFLKERKEK 79
>ZFIN|ZDB-GENE-060421-8366 [details] [associations]
symbol:trim35-24 "tripartite motif containing
35-24" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-060421-8366 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 HOGENOM:HOG000124586
OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887
EMBL:AL954363 EMBL:BC171409 EMBL:BC171411 IPI:IPI00608895
RefSeq:NP_001038176.1 UniGene:Dr.132955 Ensembl:ENSDART00000057459
GeneID:557392 KEGG:dre:557392 CTD:557392 NextBio:20881973
Uniprot:Q1MT09
Length = 460
Score = 105 (42.0 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRIC-DNSNLSCPMCRKRLS 80
+ + C VC I P+ L C+H VC ECLQ+ + CP+CR+R S
Sbjct: 11 EELSCPVCCEIFRNPVLLSCSHSVCKECLQQYWRTKTTQECPVCRRRSS 59
>ZFIN|ZDB-GENE-080402-4 [details] [associations]
symbol:btr22 "bloodthirsty-related gene family,
member 22" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080402-4 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106862
GeneTree:ENSGT00660000095328 EMBL:CT030005 IPI:IPI00632223
Ensembl:ENSDART00000135762 Bgee:F6NQA8 Uniprot:F6NQA8
Length = 551
Score = 106 (42.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNL-SCPMCRKRLSIWLRRNKDFSL 91
+ + C +C + P+ PC H+ C CL + +NS SCP C++ + + D L
Sbjct: 30 EELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSKTCSCPNCKETFT----QRPD--L 83
Query: 92 LIDENLWNQIQKYYK-KEVDQK 112
I+ L +I ++YK K+ ++K
Sbjct: 84 KINTTL-REISEHYKEKKPEEK 104
>UNIPROTKB|F1S7K1 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IEA]
[GO:0031493 "nucleosomal histone binding" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000626 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00213 SMART:SM00249 SMART:SM00466
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0000792 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:CU681848
Ensembl:ENSSSCT00000014764 Uniprot:F1S7K1
Length = 813
Score = 108 (43.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
C+ CQ ++ +PI C H+VC +CL R SCP CR L
Sbjct: 744 CICCQELVFRPITTVCQHNVCKDCLDRSFKAQVFSCPACRYNL 786
>ZFIN|ZDB-GENE-060421-3419 [details] [associations]
symbol:btr20 "bloodthirsty-related gene family,
member 20" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060421-3419 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 HOVERGEN:HBG106862 UniGene:Dr.23709
EMBL:BC065891 IPI:IPI00758608 ProteinModelPortal:Q6P000
InParanoid:Q6P000 Uniprot:Q6P000
Length = 564
Score = 106 (42.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 26/90 (28%), Positives = 47/90 (52%)
Query: 25 NSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNL-SCPMCRKRLSIWL 83
+S+ L+ + + C +C + P+ PC H+ C CL + +NS SCP C++ +
Sbjct: 47 SSSGPLS-EELRCSICLEVFTDPVSTPCGHNFCKSCLNKYWNNSQTCSCPNCKETFT--- 102
Query: 84 RRNKDFSLLIDENLWNQIQKYYK-KEVDQK 112
+ D L I+ L +I ++YK K ++K
Sbjct: 103 -QRPD--LKINTTL-REISEHYKEKRPEEK 128
>UNIPROTKB|F1NWA3 [details] [associations]
symbol:F1NWA3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
EMBL:AADN02028660 IPI:IPI00587294 Ensembl:ENSGALT00000006484
OMA:ILEAEGM Uniprot:F1NWA3
Length = 579
Score = 106 (42.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLR 84
C +C + +P+ PC H C ECL+R D+ +CP+C++ L +L+
Sbjct: 288 CSLCIRMFFEPVTTPCGHTFCKECLERCLDHRP-NCPLCKQSLREYLK 334
>UNIPROTKB|O60858 [details] [associations]
symbol:TRIM13 "E3 ubiquitin-protein ligase TRIM13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] [GO:0030433
"ER-associated protein catabolic process" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016239 "positive regulation of macroautophagy" evidence=IDA]
[GO:0097038 "perinuclear endoplasmic reticulum" evidence=IDA]
[GO:0010332 "response to gamma radiation" evidence=IEP] [GO:0010942
"positive regulation of cell death" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=TAS] [GO:0007165
"signal transduction" evidence=IMP] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005737 GO:GO:0005789 GO:GO:0046872
EMBL:CH471075 GO:GO:0043123 GO:GO:0008270 GO:GO:0010332
GO:GO:0004871 GO:GO:0010942 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0097038 GO:GO:0004842 GO:GO:0009653
InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239 EMBL:AL137060
UniGene:Hs.436922 DNASU:10206 KEGG:hsa:10206 CTD:10206 KO:K12003
NextBio:38634 OMA:QPLNIFC EMBL:AJ224819 EMBL:AF279660 EMBL:AF220127
EMBL:AF220128 EMBL:AY191002 EMBL:AF241849 EMBL:AF241850
EMBL:AY455758 EMBL:AY764035 EMBL:AK314496 EMBL:BC003579
EMBL:BC063407 IPI:IPI00477161 IPI:IPI00607858 IPI:IPI00944555
RefSeq:NP_001007279.1 RefSeq:NP_005789.2 RefSeq:NP_434698.1
RefSeq:NP_998755.1 ProteinModelPortal:O60858 SMR:O60858
STRING:O60858 PhosphoSite:O60858 PaxDb:O60858 PRIDE:O60858
Ensembl:ENST00000298772 Ensembl:ENST00000356017
Ensembl:ENST00000378182 Ensembl:ENST00000378183
Ensembl:ENST00000420995 Ensembl:ENST00000442421
Ensembl:ENST00000457662 GeneID:10206 UCSC:uc001vdp.1
UCSC:uc001vdq.1 GeneCards:GC13P050570 HGNC:HGNC:9976 HPA:HPA000367
MIM:605661 neXtProt:NX_O60858 PharmGKB:PA162406947 eggNOG:NOG238872
HOVERGEN:HBG056536 InParanoid:O60858 OrthoDB:EOG46MBJP
PhylomeDB:O60858 GenomeRNAi:10206 Bgee:O60858 CleanEx:HS_TRIM13
Genevestigator:O60858 GermOnline:ENSG00000204977 Uniprot:O60858
Length = 407
Score = 100 (40.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNS--N-------LSCPMCRKRLS 80
L + + C +C + P LPC+H+ C +CL+ I + S N CP CRK S
Sbjct: 3 LLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETS 62
Query: 81 IWLRRNKDFSLLIDENLWNQIQKYYKKEVDQKL 113
N SL ++ +L ++KY K ++ K+
Sbjct: 63 A-TGIN---SLQVNYSLKGIVEKYNKIKISPKM 91
Score = 39 (18.8 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 109 VDQKLFDQDDGVWENYHQHISTYLLTAPTYLQHMI 143
++ LFD D W+ + S+YL +++ +
Sbjct: 336 LEWSLFD-DLATWKGCLSNFSSYLTKTADFIEQSV 369
>UNIPROTKB|H3BNJ8 [details] [associations]
symbol:RNF151 "RING finger protein 151" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC005363 HGNC:HGNC:23235
ProteinModelPortal:H3BNJ8 SMR:H3BNJ8 Ensembl:ENST00000569210
Bgee:H3BNJ8 Uniprot:H3BNJ8
Length = 90
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 32 PDS-VLCLVCQGILIKPIKLPCNHHVCLECLQR 63
PDS +C VC G+L +P +LPC+H C +C+ R
Sbjct: 14 PDSNFVCSVCHGVLKRPARLPCSHIFCKKCILR 46
>ZFIN|ZDB-GENE-060421-3827 [details] [associations]
symbol:btr32 "bloodthirsty-related gene family,
member 32" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060421-3827 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
OrthoDB:EOG4KWJSP eggNOG:NOG291505 HOGENOM:HOG000234136
HOVERGEN:HBG106862 GeneTree:ENSGT00660000095328 EMBL:CU914158
EMBL:BC115345 IPI:IPI00758736 RefSeq:XP_003201305.1
UniGene:Dr.89408 SMR:Q1RLP5 Ensembl:ENSDART00000076048
GeneID:678629 KEGG:dre:678629 CTD:678629 NextBio:20902445
Uniprot:Q1RLP5
Length = 531
Score = 105 (42.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 26 SNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSC-PMCRKRLS 80
S++ L + + C +C + P+ PC H+ C CL + N++ C P+C+++ S
Sbjct: 3 SSSVLLNEELQCSICLDVFTDPVTTPCGHNFCRTCLDQYWTNTHTCCCPICKEKFS 58
>ZFIN|ZDB-GENE-070912-323 [details] [associations]
symbol:ftr25 "finTRIM family, member 25"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-323 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00670000097622 EMBL:BX548047 IPI:IPI00507459
Ensembl:ENSDART00000098047 Uniprot:F1Q5U7
Length = 553
Score = 105 (42.0 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSN-----LSCPMCRKRLSIW--LRRNKDF 89
C VC G+L +P+ +PC H C+ C+ C N + SCP CR+ + L +N F
Sbjct: 15 CSVCLGLLKEPVTIPCGHSYCMNCITD-CWNQDEQRRVYSCPQCRQTFTPRPALNKNVVF 73
Query: 90 SLLIDENLWNQIQ 102
+ ++++ ++Q
Sbjct: 74 AEIVEKLKMTRVQ 86
>UNIPROTKB|E2REB2 [details] [associations]
symbol:LNX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00595
InterPro:IPR001841 InterPro:IPR001478 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00184 SMART:SM00228 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0051260 Gene3D:3.30.40.10
InterPro:IPR013083 SUPFAM:SSF50156 InterPro:IPR017907
GeneTree:ENSGT00650000092901 KO:K10692 CTD:222484 OMA:EKDFCPL
EMBL:AAEX03014243 RefSeq:XP_543157.1 ProteinModelPortal:E2REB2
Ensembl:ENSCAFT00000010916 GeneID:486031 KEGG:cfa:486031
NextBio:20859897 Uniprot:E2REB2
Length = 689
Score = 106 (42.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 20 DNEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
+N N N + D ++C +C L++P+ PC H C +CL+ + CP+ RKRL
Sbjct: 34 ENHLYNYQNEVD-DDLVCHICLQPLLQPLDTPCGHTFCCKCLRNFLQEKDF-CPLDRKRL 91
Query: 80 SIWLRRNKDFSLLIDENL 97
L + S+L+ + L
Sbjct: 92 HFKLCKKS--SILVHKLL 107
>UNIPROTKB|Q8N448 [details] [associations]
symbol:LNX2 "Ligand of Numb protein X 2" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00595 InterPro:IPR001841 InterPro:IPR001478
PROSITE:PS50089 PROSITE:PS50106 SMART:SM00184 SMART:SM00228
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156
InterPro:IPR017907 eggNOG:NOG236845 HOGENOM:HOG000261605
HOVERGEN:HBG039539 KO:K10692 EMBL:AL138699 EMBL:BC036755
EMBL:AK172771 IPI:IPI00171047 RefSeq:NP_699202.1 UniGene:Hs.132359
PDB:2VWR PDBsum:2VWR ProteinModelPortal:Q8N448 SMR:Q8N448
IntAct:Q8N448 STRING:Q8N448 PhosphoSite:Q8N448 DMDM:29840784
PeptideAtlas:Q8N448 PRIDE:Q8N448 Ensembl:ENST00000316334
GeneID:222484 KEGG:hsa:222484 UCSC:uc001url.4 CTD:222484
GeneCards:GC13M028120 HGNC:HGNC:20421 HPA:HPA040698 MIM:609733
neXtProt:NX_Q8N448 PharmGKB:PA134899015 InParanoid:Q8N448
OMA:EKDFCPL OrthoDB:EOG4ZW59N PhylomeDB:Q8N448 ChiTaRS:LNX2
EvolutionaryTrace:Q8N448 GenomeRNAi:222484 NextBio:91602
Bgee:Q8N448 CleanEx:HS_LNX2 Genevestigator:Q8N448
GermOnline:ENSG00000139517 Uniprot:Q8N448
Length = 690
Score = 106 (42.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 20 DNEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
+N N N + D ++C +C L++P+ PC H C +CL+ + CP+ RKRL
Sbjct: 34 ENHLYNYQNEVD-DDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDF-CPLDRKRL 91
Query: 80 SIWLRRNKDFSLLIDENL 97
L + S+L+ + L
Sbjct: 92 HFKLCKKS--SILVHKLL 107
>UNIPROTKB|E1C2T9 [details] [associations]
symbol:LNX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] Pfam:PF00595 InterPro:IPR001841
InterPro:IPR001478 PROSITE:PS50089 PROSITE:PS50106 SMART:SM00184
SMART:SM00228 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0051260 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156
InterPro:IPR017907 GeneTree:ENSGT00650000092901 KO:K10692
CTD:222484 OMA:EKDFCPL EMBL:AADN02005182 IPI:IPI00590150
RefSeq:XP_417122.2 ProteinModelPortal:E1C2T9
Ensembl:ENSGALT00000027616 GeneID:418928 KEGG:gga:418928
NextBio:20822052 Uniprot:E1C2T9
Length = 692
Score = 106 (42.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 20 DNEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
+N N N + D ++C +C L++P+ PC H C +CL+ + CP+ RKRL
Sbjct: 32 ENHLYNYQNEVD-DDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDF-CPLDRKRL 89
Query: 80 SIWLRRNKDFSLLIDENL 97
L + S+L+ + L
Sbjct: 90 HFKLCKKS--SILVHKLL 105
>ZFIN|ZDB-GENE-060929-1090 [details] [associations]
symbol:rnf183 "ring finger protein 183"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-060929-1090 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 CTD:138065
OrthoDB:EOG44TP93 eggNOG:NOG285661 EMBL:BC124313 IPI:IPI00803098
RefSeq:NP_001070136.1 UniGene:Dr.80587 ProteinModelPortal:Q08CB0
STRING:Q08CB0 GeneID:767730 KEGG:dre:767730 HOGENOM:HOG000205747
InParanoid:Q08CB0 NextBio:20918116 ArrayExpress:Q08CB0
Uniprot:Q08CB0
Length = 316
Score = 104 (41.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 37 CLVC----QGILIKPIKLPCNHHVCLECLQRICDNS----NLSCPMCRKRLSIWLRRNKD 88
C+VC + P L C H CLECL RI NS L+CP+CR+ I R +D
Sbjct: 107 CIVCFCNFDNVFKTPKLLSCGHTFCLECLARINVNSPEIKTLTCPICREVTEI--RHGRD 164
Query: 89 FS-LLIDENLWNQIQKYYKKEVDQKLFDQDDG 119
LL +E ++ Q+ ++ + + F + G
Sbjct: 165 LPHLLNNEAIFRQLPSEMQRALSVR-FKRSKG 195
>UNIPROTKB|Q9BRZ2 [details] [associations]
symbol:TRIM56 "E3 ubiquitin-protein ligase TRIM56"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS] [GO:0051607
"defense response to virus" evidence=ISS] [GO:0034340 "response to
type I interferon" evidence=ISS] [GO:0032608 "interferon-beta
production" evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0051607
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 GO:GO:0034340 GO:GO:0032608
EMBL:AC105446 EMBL:AK075255 EMBL:AK092927 EMBL:BC005847
EMBL:BC011882 EMBL:BC048194 EMBL:AL512757 IPI:IPI00514832
IPI:IPI00871506 IPI:IPI00872056 RefSeq:NP_112223.1
UniGene:Hs.521092 ProteinModelPortal:Q9BRZ2 SMR:Q9BRZ2
IntAct:Q9BRZ2 STRING:Q9BRZ2 PhosphoSite:Q9BRZ2 DMDM:56749788
PaxDb:Q9BRZ2 PeptideAtlas:Q9BRZ2 PRIDE:Q9BRZ2 DNASU:81844
Ensembl:ENST00000306085 GeneID:81844 KEGG:hsa:81844 UCSC:uc003uxq.3
CTD:81844 GeneCards:GC07P100728 H-InvDB:HIX0006941 HGNC:HGNC:19028
HPA:HPA024358 neXtProt:NX_Q9BRZ2 PharmGKB:PA134958549
eggNOG:NOG301641 HOGENOM:HOG000154679 HOVERGEN:HBG079280
InParanoid:Q9BRZ2 KO:K12026 OrthoDB:EOG44F68K ChiTaRS:TRIM56
GenomeRNAi:81844 NextBio:72142 ArrayExpress:Q9BRZ2 Bgee:Q9BRZ2
CleanEx:HS_TRIM56 Genevestigator:Q9BRZ2 Uniprot:Q9BRZ2
Length = 755
Score = 106 (42.4 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSI 81
L+ D + C +C L P LPC H C +CL ++ D + CP CR+ + +
Sbjct: 14 LSSDFLACKICLEQLRAPKTLPCLHTYCQDCLAQLADGGRVRCPECRETVPV 65
>UNIPROTKB|A7E320 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9913 "Bos taurus" [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0000791 "euchromatin"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0035064 "methylated histone residue binding" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0016574 "histone ubiquitination"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0031493 "nucleosomal
histone binding" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:DAAA02019593
EMBL:DAAA02019594 EMBL:BC151671 IPI:IPI00904793
RefSeq:NP_001096568.1 UniGene:Bt.64682 ProteinModelPortal:A7E320
SMR:A7E320 STRING:A7E320 Ensembl:ENSBTAT00000044908 GeneID:530411
KEGG:bta:530411 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ
NextBio:20875252 ArrayExpress:A7E320 GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 Uniprot:A7E320
Length = 786
Score = 106 (42.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCR 76
C+ CQ ++ +PI C H+VC +CL R SCP CR
Sbjct: 717 CICCQELVFRPITTVCQHNVCKDCLDRSFKAQVFSCPACR 756
>RGD|1310105 [details] [associations]
symbol:Trim27 "tripartite motif-containing 27" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0002820 "negative regulation of adaptive immune response"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA;ISO] [GO:0045814 "negative regulation of gene
expression, epigenetic" evidence=IEA;ISO] [GO:0070206 "protein
trimerization" evidence=IEA;ISO] [GO:0072643 "interferon-gamma
secretion" evidence=IEA;ISO] [GO:0090281 "negative regulation of
calcium ion import" evidence=IEA;ISO] [GO:1900041 "negative
regulation of interleukin-2 secretion" evidence=IEA;ISO]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
RGD:1310105 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CH474072 GeneTree:ENSGT00700000104307
IPI:IPI00562695 UniGene:Rn.8393 Ensembl:ENSRNOT00000041671
UCSC:RGD:1310105 NextBio:632221 Uniprot:D4AAJ8
Length = 246
Score = 103 (41.3 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRI--CDNSNLSCPMCRKRL-SIWLRRNKDFSLLI 93
C VC ++P+ L C H++C CL R +N+SCP CR+ +R N+ +
Sbjct: 16 CPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETFPQRHMRPNRHLA--- 72
Query: 94 DENLWNQIQKYYKKEVDQKLFDQDDGVWENYHQHISTY 131
N+ Q+ K + E D + GV E + + + Y
Sbjct: 73 --NV-TQLVKQLRTERPSGP-DGEMGVCEKHREPLKLY 106
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECL-----QRICDNSNLSCPMCR 76
+ V C +C +L +P+ L C H C CL + + D SCP+CR
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>UNIPROTKB|F1PIL1 [details] [associations]
symbol:TRIM13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010332 "response to
gamma radiation" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005789 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0010332 GO:GO:0004871 GO:GO:0010942 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
GeneTree:ENSGT00690000101726 OMA:QPLNIFC EMBL:AAEX03013096
Ensembl:ENSCAFT00000006908 Uniprot:F1PIL1
Length = 455
Score = 99 (39.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 27/93 (29%), Positives = 44/93 (47%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDN---------SNLSCPMCRKRLS 80
L + + C +C + P LPC+H+ C +CL+ I + S CP CRK S
Sbjct: 51 LLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGTVRNSLWRASPFKCPTCRKETS 110
Query: 81 IWLRRNKDFSLLIDENLWNQIQKYYKKEVDQKL 113
N SL ++ +L ++KY K ++ K+
Sbjct: 111 A-TGVN---SLQVNYSLKGIVEKYNKIKISPKM 139
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 7/32 (21%), Positives = 20/32 (62%)
Query: 109 VDQKLFDQDDGVWENYHQHISTYLLTAPTYLQ 140
++ LFD+ +W+++ + S+YL + +++
Sbjct: 384 LEGSLFDELT-IWKDHLSNFSSYLTKSADFVE 414
>MGI|MGI:1338889 [details] [associations]
symbol:Uhrf1 "ubiquitin-like, containing PHD and RING finger
domains, 1" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0000790 "nuclear chromatin" evidence=ISO;IDA]
[GO:0000791 "euchromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO;IDA] [GO:0000987 "core promoter
proximal region sequence-specific DNA binding" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA;TAS] [GO:0005657 "replication fork"
evidence=ISO;IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0008327 "methyl-CpG binding" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO;IMP]
[GO:0010390 "histone monoubiquitination" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031493
"nucleosomal histone binding" evidence=IDA] [GO:0032270 "positive
regulation of cellular protein metabolic process" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;IDA]
[GO:0042393 "histone binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000626 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00213 SMART:SM00249 SMART:SM00466
UniPathway:UPA00143 MGI:MGI:1338889 Prosite:PS00299 Prosite:PS00518
GO:GO:0046872 GO:GO:0008283 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0016363
GO:GO:0035064 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0042787 GO:GO:0051865 GO:GO:0000792 GO:GO:0005657
GO:GO:0010390 GO:GO:0031493 GO:GO:0010216 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0000791 eggNOG:COG3440 KO:K10638
Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 OrthoDB:EOG408N7M EMBL:D87908
EMBL:AF274046 EMBL:AK075819 EMBL:AK143688 EMBL:AK145376
EMBL:AK145543 EMBL:AK146951 EMBL:AK147046 EMBL:AK150489
EMBL:AK151701 EMBL:AK151837 EMBL:AK152930 EMBL:AK153083
EMBL:AC026385 EMBL:BC022167 EMBL:AB066246 IPI:IPI00130200
RefSeq:NP_001104548.1 RefSeq:NP_001104549.1 RefSeq:NP_001104550.1
RefSeq:NP_035061.3 UniGene:Mm.42196 PDB:2ZKD PDB:2ZKE PDB:2ZKF
PDB:2ZKG PDB:2ZO0 PDB:2ZO1 PDB:2ZO2 PDB:3F8I PDB:3F8J PDB:3FDE
PDBsum:2ZKD PDBsum:2ZKE PDBsum:2ZKF PDBsum:2ZKG PDBsum:2ZO0
PDBsum:2ZO1 PDBsum:2ZO2 PDBsum:3F8I PDBsum:3F8J PDBsum:3FDE
ProteinModelPortal:Q8VDF2 SMR:Q8VDF2 MINT:MINT-1172910
STRING:Q8VDF2 PhosphoSite:Q8VDF2 REPRODUCTION-2DPAGE:Q8VDF2
PRIDE:Q8VDF2 Ensembl:ENSMUST00000001258 Ensembl:ENSMUST00000113035
Ensembl:ENSMUST00000113038 Ensembl:ENSMUST00000113039 GeneID:18140
KEGG:mmu:18140 InParanoid:Q8VDF2 EvolutionaryTrace:Q8VDF2
NextBio:293384 Bgee:Q8VDF2 Genevestigator:Q8VDF2
GermOnline:ENSMUSG00000001228 Uniprot:Q8VDF2
Length = 782
Score = 105 (42.0 bits), Expect = 0.00011, P = 0.00011
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
C+ CQ ++ +P+ C H+VC +CL R SCP CR L
Sbjct: 713 CICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFSCPACRFEL 755
>UNIPROTKB|Q96T88 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IDA] [GO:0008327 "methyl-CpG
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0016574 "histone ubiquitination" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0000791 "euchromatin" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0005657 "replication fork" evidence=IDA]
[GO:0000790 "nuclear chromatin" evidence=ISS;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0044729 "hemi-methylated DNA-binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000987 "core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000373
"positive regulation of DNA topoisomerase (ATP-hydrolyzing)
activity" evidence=IC] [GO:0032270 "positive regulation of cellular
protein metabolic process" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IC] [GO:0031493 "nucleosomal histone binding"
evidence=ISS] [GO:0010390 "histone monoubiquitination"
evidence=ISS] [GO:0042802 "identical protein binding" evidence=ISS]
[GO:0016363 "nuclear matrix" evidence=ISS] [GO:0008283 "cell
proliferation" evidence=IEP] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0006281 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 GO:GO:0042802
EMBL:CH471139 GO:GO:0000987 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0032270
GO:GO:0004842 GO:GO:0016363 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0010390 GO:GO:0031493
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
GO:GO:0008327 PDB:3T6R PDBsum:3T6R PDB:3DB3 PDBsum:3DB3 PDB:3ASK
PDB:3ASL PDB:4GY5 PDBsum:3ASK PDBsum:3ASL PDBsum:4GY5
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:AC027319
GO:GO:2000373 CTD:29128 HOGENOM:HOG000124662 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:AF129507
EMBL:AB177623 EMBL:AB177624 EMBL:AB075601 EMBL:AF274048
EMBL:EF560733 EMBL:AK025578 EMBL:AK289389 EMBL:AK314579
EMBL:AY787925 EMBL:AC053467 EMBL:BC113875 IPI:IPI00797945
RefSeq:NP_001041666.1 RefSeq:NP_037414.3 UniGene:Hs.108106 PDB:2FAZ
PDB:2L3R PDB:2LGG PDB:2LGK PDB:2LGL PDB:2PB7 PDB:3BI7 PDB:3CLZ
PDB:3DB4 PDB:3DWH PDB:3FL2 PDB:3SHB PDB:3SOU PDB:3SOW PDB:3SOX
PDB:3ZVY PDB:3ZVZ PDBsum:2FAZ PDBsum:2L3R PDBsum:2LGG PDBsum:2LGK
PDBsum:2LGL PDBsum:2PB7 PDBsum:3BI7 PDBsum:3CLZ PDBsum:3DB4
PDBsum:3DWH PDBsum:3FL2 PDBsum:3SHB PDBsum:3SOU PDBsum:3SOW
PDBsum:3SOX PDBsum:3ZVY PDBsum:3ZVZ ProteinModelPortal:Q96T88
SMR:Q96T88 IntAct:Q96T88 MINT:MINT-2815626 STRING:Q96T88
PhosphoSite:Q96T88 DMDM:67462077 PaxDb:Q96T88 PRIDE:Q96T88
DNASU:29128 Ensembl:ENST00000262952 Ensembl:ENST00000398240
Ensembl:ENST00000455180 GeneID:29128 KEGG:hsa:29128 UCSC:uc002mbo.3
GeneCards:GC19P004910 HGNC:HGNC:12556 HPA:HPA049408 MIM:607990
neXtProt:NX_Q96T88 PharmGKB:PA37196 InParanoid:Q96T88
OrthoDB:EOG408N7M EvolutionaryTrace:Q96T88 GenomeRNAi:29128
NextBio:52244 ArrayExpress:Q96T88 CleanEx:HS_UHRF1
Genevestigator:Q96T88 GermOnline:ENSG00000034063 Uniprot:Q96T88
Length = 793
Score = 105 (42.0 bits), Expect = 0.00011, P = 0.00011
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCR 76
C+ CQ ++ +PI C H+VC +CL R SCP CR
Sbjct: 724 CICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACR 763
>UNIPROTKB|F1MDV4 [details] [associations]
symbol:RNFT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014213
OMA:LNPTLDH EMBL:DAAA02048340 IPI:IPI00924338
Ensembl:ENSBTAT00000061323 ArrayExpress:F1MDV4 Uniprot:F1MDV4
Length = 433
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 25/84 (29%), Positives = 37/84 (44%)
Query: 5 KVFRDVSLLLVNSKMDNEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRI 64
+ FR V + V + D + C +CQ KPI L C H C EC+ +
Sbjct: 342 RTFRQVLRIFVTRPSYGVPASKRQCSDVDDI-CSICQAEFQKPILLICQHIFCEECIT-L 399
Query: 65 CDNSNLSCPMCRKRLSIWLRRNKD 88
N +CP+CR +S + + KD
Sbjct: 400 WFNREKTCPLCRTVISDHINKWKD 423
>UNIPROTKB|Q6GQD5 [details] [associations]
symbol:rnf146 "E3 ubiquitin-protein ligase rnf146"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0070936 "protein K48-linked
ubiquitination" evidence=ISS] [GO:0072572 "poly-ADP-D-ribose
binding" evidence=ISS] [GO:0090263 "positive regulation of
canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR018123
PROSITE:PS50089 SMART:SM00184 SMART:SM00678 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0005829 GO:GO:0005634
GO:GO:0016055 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0090263 InterPro:IPR017907
GO:GO:0070936 GO:GO:0042787 GO:GO:0051865 InterPro:IPR004170
Pfam:PF02825 PROSITE:PS50918 GO:GO:0072572 HOVERGEN:HBG057514
KO:K15700 CTD:81847 EMBL:BC072810 RefSeq:NP_001085469.1
UniGene:Xl.14626 ProteinModelPortal:Q6GQD5 SMR:Q6GQD5 GeneID:443895
KEGG:xla:443895 Xenbase:XB-GENE-974784 Uniprot:Q6GQD5
Length = 314
Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 5 KVFRDVSLLLVNSKMDNEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRI 64
+V ++L N K+D E C SNN + C +C I + P+ LPC H C C++
Sbjct: 6 EVSHSANMLPTNKKLD-EPC-SNNAPSLSVPECAICLQICVHPVSLPCKHIFCYLCVKG- 62
Query: 65 CDNSNLSCPMCRKRL 79
C +CR+ +
Sbjct: 63 ASWLGRRCALCRQEI 77
>MGI|MGI:2385051 [details] [associations]
symbol:Trim31 "tripartite motif-containing 31" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:2385051 Prosite:PS00518 GO:GO:0005739
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:CH466559 HOGENOM:HOG000234133
CTD:11074 eggNOG:NOG310139 KO:K12011 OMA:EFQFLNP OrthoDB:EOG4K0QNJ
EMBL:AK033650 EMBL:BC026666 IPI:IPI00153211 RefSeq:NP_666189.1
UniGene:Mm.213417 HSSP:Q92021 ProteinModelPortal:Q8R0K2 SMR:Q8R0K2
STRING:Q8R0K2 PRIDE:Q8R0K2 Ensembl:ENSMUST00000078438 GeneID:224762
KEGG:mmu:224762 UCSC:uc008cll.1 GeneTree:ENSGT00700000104499
InParanoid:Q8R0K2 NextBio:377349 Bgee:Q8R0K2 Uniprot:Q8R0K2
Length = 507
Score = 104 (41.7 bits), Expect = 0.00015, P = 0.00015
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN-LSCPMCR 76
+ V C +C IL P+ + C H+ CL+C+ ++ S + CP+C+
Sbjct: 12 EEVTCPICMEILQDPVTIDCGHNFCLQCISQVGKTSEKIQCPLCK 56
>ZFIN|ZDB-GENE-090508-4 [details] [associations]
symbol:ftr59 "finTRIM family, member 59" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-090508-4 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:BX005466 IPI:IPI00487750 RefSeq:XP_686796.2
ProteinModelPortal:F8W341 Ensembl:ENSDART00000148970 GeneID:558486
KEGG:dre:558486 NextBio:20882494 Uniprot:F8W341
Length = 540
Score = 104 (41.7 bits), Expect = 0.00017, P = 0.00017
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNL----SCPMCRKRLS 80
D +CLVC +L P+ +PC H C C+ D + SCP CR+ S
Sbjct: 9 DEFMCLVCLDLLKDPVTIPCGHSYCKSCITGCWDQDDEKRVHSCPQCRETFS 60
>ZFIN|ZDB-GENE-070912-585 [details] [associations]
symbol:ftr10 "finTRIM family, member 10"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-585 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00670000097622 EMBL:BX005044 IPI:IPI00868260
Ensembl:ENSDART00000136105 Uniprot:E9QFY2
Length = 276
Score = 102 (41.0 bits), Expect = 0.00019, P = 0.00019
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN----LSCPMCRK 77
D CL+C +L P+ +PC H C+ C+ D SCP CR+
Sbjct: 12 DQFSCLICLDLLKDPVAIPCGHSYCMSCISGYWDQDEQKGVYSCPQCRQ 60
>UNIPROTKB|J9NYP9 [details] [associations]
symbol:RNF213 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003593 PROSITE:PS50089 SMART:SM00184 SMART:SM00382
Prosite:PS00518 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0017111
InterPro:IPR017907 GeneTree:ENSGT00510000049907 EMBL:AAEX03006199
EMBL:AAEX03006200 Ensembl:ENSCAFT00000045693 Uniprot:J9NYP9
Length = 4036
Score = 110 (43.8 bits), Expect = 0.00019, P = 0.00019
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C VC G +P+ LPC H CL C+ ++CP C L KDFSL +++
Sbjct: 3257 CPVCLGDAQEPVSLPCGHVFCLRCINTCITLGQMACPYCLTDLP------KDFSLTVNQE 3310
Query: 97 LWNQIQKY 104
+ I+K+
Sbjct: 3311 HRDAIRKH 3318
>UNIPROTKB|Q86T96 [details] [associations]
symbol:RNF180 "E3 ubiquitin-protein ligase RNF180"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0031227 "intrinsic to endoplasmic reticulum membrane"
evidence=IEA] [GO:0031624 "ubiquitin conjugating enzyme binding"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005635 GO:GO:0046872 GO:GO:0008270
GO:GO:0031227 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0032436 InterPro:IPR017907 EMBL:AK090756 EMBL:AL832580
EMBL:BC101277 EMBL:BC101278 EMBL:BC101279 EMBL:BC101397
IPI:IPI00184160 IPI:IPI00646596 IPI:IPI00784453
RefSeq:NP_001107033.1 RefSeq:NP_848627.1 UniGene:Hs.657843
ProteinModelPortal:Q86T96 SMR:Q86T96 STRING:Q86T96
PhosphoSite:Q86T96 DMDM:118573800 PRIDE:Q86T96 DNASU:285671
Ensembl:ENST00000296615 Ensembl:ENST00000381081
Ensembl:ENST00000389100 GeneID:285671 KEGG:hsa:285671
UCSC:uc003jth.4 UCSC:uc003jti.3 UCSC:uc010iws.3 CTD:285671
GeneCards:GC05P063498 HGNC:HGNC:27752 HPA:HPA006897
neXtProt:NX_Q86T96 PharmGKB:PA134980027 eggNOG:NOG42632
HOGENOM:HOG000154158 HOVERGEN:HBG093907 InParanoid:Q86T96 KO:K15708
OMA:KAFHLFG OrthoDB:EOG4Q58QC ChiTaRS:RNF180 GenomeRNAi:285671
NextBio:95695 ArrayExpress:Q86T96 Bgee:Q86T96 CleanEx:HS_RNF180
Genevestigator:Q86T96 GermOnline:ENSG00000164197 Uniprot:Q86T96
Length = 592
Score = 104 (41.7 bits), Expect = 0.00019, P = 0.00019
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 13 LLVNSKMDNEDCNSNNTLTPDSVLCLVCQGILIKPIKL-PCNHHVCLECLQRIC-DN-SN 69
+ +N++M ++ N DS +C VC + P PC+H C CL+ + DN S+
Sbjct: 409 MTLNNEMSTDEDNEYAE-EKDSYICAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSS 467
Query: 70 LSCPMCRKRLS 80
CP+CR +S
Sbjct: 468 TPCPLCRTIIS 478
>UNIPROTKB|E2R819 [details] [associations]
symbol:RNF213 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003593 PROSITE:PS50089 SMART:SM00184 SMART:SM00382
Prosite:PS00518 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0017111
InterPro:IPR017907 OMA:GMEFVQG GeneTree:ENSGT00510000049907
EMBL:AAEX03006199 EMBL:AAEX03006200 Ensembl:ENSCAFT00000009155
Uniprot:E2R819
Length = 4452
Score = 110 (43.8 bits), Expect = 0.00021, P = 0.00021
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C VC G +P+ LPC H CL C+ ++CP C L KDFSL +++
Sbjct: 3244 CPVCLGDAQEPVSLPCGHVFCLRCINTCITLGQMACPYCLTDLP------KDFSLTVNQE 3297
Query: 97 LWNQIQKY 104
+ I+K+
Sbjct: 3298 HRDAIRKH 3305
>UNIPROTKB|D6RB76 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:AC058822 EMBL:AC095040
HGNC:HGNC:6657 EMBL:AC124017 IPI:IPI00967553
ProteinModelPortal:D6RB76 SMR:D6RB76 Ensembl:ENST00000512247
ArrayExpress:D6RB76 Bgee:D6RB76 Uniprot:D6RB76
Length = 90
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL 79
D ++C +C L+ P+ PC H C CL + CPM RK L
Sbjct: 37 DDLICHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDF-CPMDRKPL 82
>WB|WBGene00016191 [details] [associations]
symbol:C28G1.6 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:FO080383
GeneTree:ENSGT00530000064633 eggNOG:KOG4185 RefSeq:NP_741866.1
ProteinModelPortal:Q8MQB4 SMR:Q8MQB4 PaxDb:Q8MQB4
EnsemblMetazoa:C28G1.6 GeneID:181130 KEGG:cel:CELE_C28G1.6
UCSC:C28G1.6 CTD:181130 WormBase:C28G1.6 InParanoid:Q8MQB4
NextBio:912534 Uniprot:Q8MQB4
Length = 295
Score = 102 (41.0 bits), Expect = 0.00021, P = 0.00021
Identities = 20/86 (23%), Positives = 41/86 (47%)
Query: 47 PIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDENLWNQIQKYYK 106
P L C H +C C ++ +N + CP CR+ + + +++D + L+ +I + +
Sbjct: 20 PKNLNCGHVICPVCASKLFENPEVKCPTCRQPIEV---KDRDVNNLVTNFGMLKIIREIE 76
Query: 107 KEVDQKLFDQDDGVWENYHQHISTYL 132
+ K D W N HQ ++ ++
Sbjct: 77 ESGKNKKIDTAGPTWCNAHQEVAKFI 102
>UNIPROTKB|I7GGX8 [details] [associations]
symbol:TRIM31 "Tripartite motif protein 31 isoform beta"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104499
EMBL:CT737425 EMBL:AB158487 UniGene:Ssc.26008 UniGene:Ssc.83065
ProteinModelPortal:I7GGX8 Ensembl:ENSSSCT00000035521 Uniprot:I7GGX8
Length = 411
Score = 103 (41.3 bits), Expect = 0.00022, P = 0.00022
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICD--NSNLSCPMCRK 77
+ V+C +C IL P + C H CL+C+ R + +S + CP+C K
Sbjct: 12 EEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNK 58
>UNIPROTKB|I3LB91 [details] [associations]
symbol:RFPL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099707
OMA:WIISMKA EMBL:CU019570 Ensembl:ENSSSCT00000027290 Uniprot:I3LB91
Length = 300
Score = 102 (41.0 bits), Expect = 0.00022, P = 0.00022
Identities = 26/82 (31%), Positives = 38/82 (46%)
Query: 5 KVFRDVSLLLVNSKMD-NEDCNSNNTLTP------DSVLCLVCQGILIKPIKLPCNHHVC 57
K+ +SL ++ D +E C +T+ D C VC + PI L C H C
Sbjct: 2 KMITTISLFIIYHHTDYSELCIFPSTVRTMANNLQDEAACTVCLEVFFSPITLSCTHTFC 61
Query: 58 LECLQ---RICDNSNLSCPMCR 76
L C+Q + ++ L CPMCR
Sbjct: 62 LYCMQSWMKEQEDLKLVCPMCR 83
>ZFIN|ZDB-GENE-081105-171 [details] [associations]
symbol:si:dkey-117k10.8 "si:dkey-117k10.8"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-081105-171 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:CR376731 GeneTree:ENSGT00610000087205 IPI:IPI00773484
Ensembl:ENSDART00000074163 Uniprot:F1QYG2
Length = 627
Score = 95 (38.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 14 LVNSKMDNEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDN--SNLS 71
L + K + + +T D + C +C+ +L P+ + C H+ C C+ DN +
Sbjct: 284 LTSCKAEGNISFNPRLMTEDHLKCPLCKSMLKDPVSITCGHNYCRGCINAFWDNCAGDFV 343
Query: 72 CPMC 75
CP C
Sbjct: 344 CPQC 347
Score = 49 (22.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/58 (34%), Positives = 26/58 (44%)
Query: 66 DNSNLSCPMCRKRLSIWLRRNKDFSLLIDENLWNQIQKYYKKEVDQKLFDQDDGVWEN 123
D NL+ +C K K FS L + + KYY +E D +D DDG EN
Sbjct: 510 DVRNLA-HLCSKLQEEVSGLKKSFSKLKRKK--TEKDKYYDEEDD---YDDDDGEEEN 561
>UNIPROTKB|F1RSW8 [details] [associations]
symbol:LNX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00595 InterPro:IPR001841
InterPro:IPR001478 PROSITE:PS50089 PROSITE:PS50106 SMART:SM00184
SMART:SM00228 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0051260 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156
InterPro:IPR017907 GeneTree:ENSGT00650000092901 OMA:EKDFCPL
EMBL:CU606917 Ensembl:ENSSSCT00000010196 Uniprot:F1RSW8
Length = 692
Score = 104 (41.7 bits), Expect = 0.00023, P = 0.00023
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLL 92
D ++C +C L++P+ PC H C +CL+ + CP+ RKRL L + S+L
Sbjct: 47 DDLVCHICLQPLLQPLDTPCGHTFCCKCLRNFLQEKDF-CPLDRKRLHFKLCKKS--SIL 103
Query: 93 IDENL 97
+ + L
Sbjct: 104 VHKLL 108
>UNIPROTKB|E2RB71 [details] [associations]
symbol:RNF169 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000780 "negative regulation of double-strand
break repair" evidence=IEA] [GO:0070530 "K63-linked polyubiquitin
binding" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005654 GO:GO:0046872
GO:GO:0008270 GO:GO:0006974 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0035861 GO:GO:2000780
GeneTree:ENSGT00620000087973 CTD:254225 OMA:ETCCSSE
EMBL:AAEX03012805 EMBL:AAEX03012806 RefSeq:XP_851632.2
Ensembl:ENSCAFT00000008805 GeneID:609300 KEGG:cfa:609300
NextBio:20894904 Uniprot:E2RB71
Length = 712
Score = 104 (41.7 bits), Expect = 0.00024, P = 0.00024
Identities = 21/49 (42%), Positives = 23/49 (46%)
Query: 40 CQGILIKP---IKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRR 85
C G L P LPC H +C C QR D + CP CR R W RR
Sbjct: 72 CAGCLETPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCRARGPAWARR 120
>ZFIN|ZDB-GENE-060503-108 [details] [associations]
symbol:si:ch211-175l6.2 "si:ch211-175l6.2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060503-108 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726
OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887
EMBL:AL954363 IPI:IPI00610790 Ensembl:ENSDART00000144830
InParanoid:Q1MT12 Uniprot:Q1MT12
Length = 447
Score = 103 (41.3 bits), Expect = 0.00025, P = 0.00025
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRIC-DNSNLSCPMCRK 77
++ + + C VC I P+ L C+H VC ECLQ+ + CP+CRK
Sbjct: 6 VSAEELSCPVCCEIFRNPVVLSCSHSVCKECLQQFWRTKTTQECPVCRK 54
>DICTYBASE|DDB_G0267718 [details] [associations]
symbol:DDB_G0267718 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0267718
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 EMBL:AAFI02000003
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:NOG329292 RefSeq:XP_647253.1 ProteinModelPortal:Q55GD1
EnsemblProtists:DDB0189490 GeneID:8616058 KEGG:ddi:DDB_G0267718
InParanoid:Q55GD1 Uniprot:Q55GD1
Length = 592
Score = 100 (40.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 31 TPDSV-----LCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCR 76
TPD + LC +C+ L+ PI L CNH C C+ + +CP+CR
Sbjct: 520 TPDQINAAGDLCSICRSSLVSPIVLRCNHIYCENCVSTWLERER-TCPLCR 569
Score = 37 (18.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 11 SLLLVNSKMDNEDCNSNN 28
+L+L N+ + N + N+NN
Sbjct: 112 NLILQNNNIINNNNNNNN 129
Score = 34 (17.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 14 LVNSKMDNEDCNSNN 28
++N+ +N + N+NN
Sbjct: 120 IINNNNNNNNNNNNN 134
Score = 34 (17.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 9 DVSLLLVNSKMDNEDCNSNN 28
+VS+ + ++ N+D + NN
Sbjct: 2 EVSIRIDSNNNSNDDSSRNN 21
Score = 33 (16.7 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 16 NSKMDNEDCNSNNTL 30
N+ +N + N+NN L
Sbjct: 138 NNNNNNNNNNNNNNL 152
>UNIPROTKB|B6CHA3 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0000791
"euchromatin" evidence=ISS] [GO:0000792 "heterochromatin"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005657 "replication fork" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0016574 "histone
ubiquitination" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0044729 "hemi-methylated DNA-binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Prosite:PS00299 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:EU177101
RefSeq:NP_001129236.1 UniGene:Xl.23750 ProteinModelPortal:B6CHA3
GeneID:432234 KEGG:xla:432234 Xenbase:XB-GENE-5821540
Uniprot:B6CHA3
Length = 772
Score = 104 (41.7 bits), Expect = 0.00027, P = 0.00027
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL--SIWLRRNKDFS 90
++ LC+ CQ ++ +P+ C+H++C CL R SCP CR L + L NK
Sbjct: 699 ETFLCICCQEVVYEPVTTECHHNICKGCLDRSFKALVHSCPACRHDLGKNYPLNVNKPLQ 758
Query: 91 LLIDE 95
++ +
Sbjct: 759 AILSQ 763
>RGD|1595855 [details] [associations]
symbol:Uhrf1 "ubiquitin-like with PHD and ring finger domains 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0000790 "nuclear chromatin" evidence=ISO;ISS] [GO:0000791
"euchromatin" evidence=ISO;ISS] [GO:0000792 "heterochromatin"
evidence=ISO;ISS] [GO:0000987 "core promoter proximal region
sequence-specific DNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005634
"nucleus" evidence=ISO] [GO:0005657 "replication fork"
evidence=ISO;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO;ISS] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008327 "methyl-CpG binding" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO;ISS]
[GO:0010390 "histone monoubiquitination" evidence=IEA;ISO]
[GO:0016363 "nuclear matrix" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO;ISS] [GO:0031493 "nucleosomal histone
binding" evidence=IEA;ISO] [GO:0032270 "positive regulation of
cellular protein metabolic process" evidence=ISO] [GO:0035064
"methylated histone residue binding" evidence=ISO;ISS] [GO:0042393
"histone binding" evidence=ISO;ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISO;ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 RGD:1595855
Prosite:PS00299 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842
GO:GO:0035064 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0042787 GO:GO:0051865 GO:GO:0000792 GO:GO:0005657
GO:GO:0016574 GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0000791 KO:K10638 Gene3D:2.30.280.10 CTD:29128
HOVERGEN:HBG059298 GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY321334 EMBL:BC099224 IPI:IPI00371346 RefSeq:NP_001008882.1
UniGene:Rn.54318 ProteinModelPortal:Q7TPK1 SMR:Q7TPK1 PRIDE:Q7TPK1
GeneID:316129 KEGG:rno:316129 NextBio:670462 Genevestigator:Q7TPK1
Uniprot:Q7TPK1
Length = 774
Score = 104 (41.7 bits), Expect = 0.00027, P = 0.00027
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCR 76
C+ CQ ++ +P+ C H+VC +CL R SCP CR
Sbjct: 705 CICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFSCPACR 744
>UNIPROTKB|K7GKN4 [details] [associations]
symbol:TRIM27 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104307 EMBL:FP085562
Ensembl:ENSSSCT00000035675 Uniprot:K7GKN4
Length = 334
Score = 102 (41.0 bits), Expect = 0.00027, P = 0.00027
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRI--CDNSNLSCPMCRK 77
C VC ++P+ L C H++C CL R +N+SCP CR+
Sbjct: 16 CPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRE 58
>RGD|1595064 [details] [associations]
symbol:Rnf180 "ring finger protein 180" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0031227
"intrinsic to endoplasmic reticulum membrane" evidence=IEA;ISO]
[GO:0031624 "ubiquitin conjugating enzyme binding"
evidence=IEA;ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 RGD:1595064
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0031227
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0032436
InterPro:IPR017907 GeneTree:ENSGT00390000012786 IPI:IPI00768080
Ensembl:ENSRNOT00000066069 ArrayExpress:F1LRQ3 Uniprot:F1LRQ3
Length = 183
Score = 99 (39.9 bits), Expect = 0.00027, P = 0.00027
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 15 VNSKMDNEDCNSNNTLTPDSVLCLVCQGILIKPIKL-PCNHHVCLECLQRIC-DN-SNLS 71
++++M +D T DS +C VC + P PC+H C CL+ + DN ++
Sbjct: 2 LSNEMSTDD-EPEFTEEKDSYICAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTP 60
Query: 72 CPMCRKRLS 80
CP+CR +S
Sbjct: 61 CPLCRTIIS 69
>UNIPROTKB|O76064 [details] [associations]
symbol:RNF8 "E3 ubiquitin-protein ligase RNF8" species:9606
"Homo sapiens" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010212 "response
to ionizing radiation" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0045739 "positive regulation of DNA repair" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=IDA] [GO:0033522
"histone H2A ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0000151 "ubiquitin ligase complex"
evidence=IDA] [GO:0045900 "negative regulation of translational
elongation" evidence=IMP] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IDA] [GO:0000781 "chromosome, telomeric
region" evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0036297 "interstrand cross-link repair"
evidence=TAS] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISS] [GO:0007286 "spermatid
development" evidence=ISS] [GO:0043486 "histone exchange"
evidence=ISS] [GO:0070535 "histone H2A K63-linked ubiquitination"
evidence=IMP;IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0033523 "histone H2B ubiquitination" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=IDA] [GO:0045190
"isotype switching" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950 PROSITE:PS50006
PROSITE:PS50089 SMART:SM00184 SMART:SM00240 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0042803 EMBL:CH471081
GO:GO:0051301 GO:GO:0007067 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0043486 GO:GO:0045190 GO:GO:0004842 GO:GO:0030496
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0051865 GO:GO:0000781 GO:GO:0006303
GO:GO:0033523 GO:GO:0036297 GO:GO:0045900 GO:GO:0035861
GO:GO:0070535 HOVERGEN:HBG023954 KO:K10667 CTD:9025
eggNOG:NOG242257 HOGENOM:HOG000154169 OMA:EVTEEDW OrthoDB:EOG4TF0KP
PANTHER:PTHR15067:SF3 EMBL:AB012770 EMBL:AF334675 EMBL:AB014546
EMBL:AK298319 EMBL:BT007446 EMBL:AK222765 EMBL:AL096712
EMBL:BC007517 IPI:IPI00022561 IPI:IPI00923427 RefSeq:NP_003949.1
RefSeq:NP_898901.1 UniGene:Hs.485278 PDB:2CSW PDB:2PIE PDB:4AYC
PDB:4EPO PDBsum:2CSW PDBsum:2PIE PDBsum:4AYC PDBsum:4EPO
ProteinModelPortal:O76064 SMR:O76064 DIP:DIP-31265N IntAct:O76064
MINT:MINT-1459889 STRING:O76064 PhosphoSite:O76064 PaxDb:O76064
PRIDE:O76064 DNASU:9025 Ensembl:ENST00000229866
Ensembl:ENST00000373479 Ensembl:ENST00000394443
Ensembl:ENST00000469731 GeneID:9025 KEGG:hsa:9025 UCSC:uc003onq.4
GeneCards:GC06P037321 HGNC:HGNC:10071 MIM:611685 neXtProt:NX_O76064
PharmGKB:PA34445 PhylomeDB:O76064 EvolutionaryTrace:O76064
GenomeRNAi:9025 NextBio:33813 ArrayExpress:O76064 Bgee:O76064
CleanEx:HS_RNF8 Genevestigator:O76064 GermOnline:ENSG00000112130
Uniprot:O76064
Length = 485
Score = 103 (41.3 bits), Expect = 0.00028, P = 0.00028
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 28 NTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNK 87
N + + + C++C I+ + L C H C C+ + CP+CRK + ++K
Sbjct: 394 NDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRK-IECPICRKDI-----KSK 447
Query: 88 DFSLLIDENLWNQIQKYYKKEVDQK 112
+SL++D N N++ EV ++
Sbjct: 448 TYSLVLD-NCINKMVNNLSSEVKER 471
>MGI|MGI:2684862 [details] [associations]
symbol:Trim58 "tripartite motif-containing 58" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:2684862 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 HSSP:Q99728 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 HOGENOM:HOG000234133
HOVERGEN:HBG001357 CTD:25893 eggNOG:NOG269716 KO:K12027
OrthoDB:EOG4J6RQS EMBL:AL645802 IPI:IPI00353647
RefSeq:NP_001034136.1 UniGene:Mm.339507 ProteinModelPortal:Q5NCC9
SMR:Q5NCC9 PhosphoSite:Q5NCC9 PRIDE:Q5NCC9
Ensembl:ENSMUST00000075084 GeneID:216781 KEGG:mmu:216781
UCSC:uc007jby.1 InParanoid:Q5NCC9 OMA:EVIVGER NextBio:375308
Bgee:Q5NCC9 CleanEx:MM_TRIM58 Genevestigator:Q5NCC9 Uniprot:Q5NCC9
Length = 485
Score = 103 (41.3 bits), Expect = 0.00028, P = 0.00028
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSN-----LSCPMCRKRLS-IWLRRNKDFS 90
C VC L +PI + C H CL C+ C+ S+ +CP CR R N+ +
Sbjct: 15 CSVCLDFLQEPISVDCGHSFCLRCISEFCEKSDSAQGVYACPQCRGPFRPASFRPNRQLA 74
Query: 91 LLID 94
L+D
Sbjct: 75 SLVD 78
>UNIPROTKB|Q5R4I2 [details] [associations]
symbol:RNF8 "E3 ubiquitin-protein ligase RNF8" species:9601
"Pongo abelii" [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033522 "histone H2A ubiquitination"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043486 "histone exchange" evidence=ISS] [GO:0045190 "isotype
switching" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0045900 "negative regulation of
translational elongation" evidence=ISS] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950 PROSITE:PS50006
PROSITE:PS50089 SMART:SM00184 SMART:SM00240 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0042803 GO:GO:0051301
GO:GO:0007067 GO:GO:0007286 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0010212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043486
GO:GO:0045190 GO:GO:0004842 GO:GO:0030496 GO:GO:0042393
GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907 GO:GO:0070936
GO:GO:0000781 GO:GO:0006303 GO:GO:0033523 GO:GO:0045900
GO:GO:0035861 GO:GO:0070535 HSSP:O76064 HOVERGEN:HBG023954
KO:K10667 CTD:9025 PANTHER:PTHR15067:SF3 EMBL:CR861266
RefSeq:NP_001126963.1 UniGene:Pab.1586 ProteinModelPortal:Q5R4I2
SMR:Q5R4I2 GeneID:100173982 KEGG:pon:100173982 InParanoid:Q5R4I2
Uniprot:Q5R4I2
Length = 486
Score = 103 (41.3 bits), Expect = 0.00028, P = 0.00028
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 28 NTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNK 87
N + + + C++C I+ + L C H C C+ + CP+CRK + ++K
Sbjct: 395 NDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRK-IECPICRKDI-----KSK 448
Query: 88 DFSLLIDENLWNQIQKYYKKEVDQK 112
+SL++D N N++ EV ++
Sbjct: 449 TYSLVLD-NCINKMVNNLSSEVKER 472
>UNIPROTKB|Q8WVD3 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518
Reactome:REACT_6900 GO:GO:0016055 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 GO:GO:0005622 EMBL:CH471088
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P38398 CleanEx:HS_NARF
HOGENOM:HOG000230946 HOVERGEN:HBG074331 CTD:51444 eggNOG:NOG44750
KO:K10668 OMA:EANFTRQ OrthoDB:EOG4J9N0K EMBL:AF162680 EMBL:AK023579
EMBL:AK315761 EMBL:BT006878 EMBL:CR457150 EMBL:BC018107
EMBL:AL133557 IPI:IPI00012239 IPI:IPI00328938 PIR:T43439
RefSeq:NP_001178253.2 RefSeq:NP_057355.2 RefSeq:NP_937761.1
UniGene:Hs.302408 ProteinModelPortal:Q8WVD3 SMR:Q8WVD3
IntAct:Q8WVD3 MINT:MINT-1479614 STRING:Q8WVD3 PhosphoSite:Q8WVD3
DMDM:74762632 PRIDE:Q8WVD3 DNASU:51444 Ensembl:ENST00000257190
Ensembl:ENST00000261593 GeneID:51444 KEGG:hsa:51444 UCSC:uc002kxg.3
UCSC:uc002kxh.3 GeneCards:GC18P029671 HGNC:HGNC:17765 HPA:HPA041101
HPA:HPA041373 neXtProt:NX_Q8WVD3 PharmGKB:PA134952071
InParanoid:Q8WVD3 PhylomeDB:Q8WVD3 GenomeRNAi:51444 NextBio:55035
Bgee:Q8WVD3 CleanEx:HS_RNF138 Genevestigator:Q8WVD3 Uniprot:Q8WVD3
Length = 245
Score = 101 (40.6 bits), Expect = 0.00028, P = 0.00028
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 22 EDCNSNNTLTPDSVLCLVCQGILIKPIKLP-CNHHVCLECLQRICDNSNLSCPMCR 76
ED ++ + T D C VCQ +L P++ C H C +C S CP+CR
Sbjct: 3 EDLSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCR 58
>MGI|MGI:1929211 [details] [associations]
symbol:Rnf138 "ring finger protein 138" species:10090 "Mus
musculus" [GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 UniPathway:UPA00143 MGI:MGI:1929211
Prosite:PS00518 GO:GO:0016055 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:P38398 GeneTree:ENSGT00530000063064
HOGENOM:HOG000230946 HOVERGEN:HBG074331 CTD:51444 eggNOG:NOG44750
KO:K10668 OMA:EANFTRQ OrthoDB:EOG4J9N0K EMBL:AB025010 EMBL:AB025011
EMBL:AK010486 EMBL:AK004238 EMBL:AK136138 EMBL:BC003712
IPI:IPI00123749 IPI:IPI00132441 RefSeq:NP_062680.2
RefSeq:NP_997506.1 UniGene:Mm.253542 ProteinModelPortal:Q9CQE0
SMR:Q9CQE0 IntAct:Q9CQE0 STRING:Q9CQE0 PhosphoSite:Q9CQE0
PRIDE:Q9CQE0 Ensembl:ENSMUST00000052396 Ensembl:ENSMUST00000072847
GeneID:56515 KEGG:mmu:56515 UCSC:uc008efb.1 UCSC:uc008efc.1
InParanoid:Q9CQE0 NextBio:312826 Bgee:Q9CQE0 CleanEx:MM_RNF138
Genevestigator:Q9CQE0 GermOnline:ENSMUSG00000024317 Uniprot:Q9CQE0
Length = 245
Score = 101 (40.6 bits), Expect = 0.00028, P = 0.00028
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 21 NEDCNSNNTLTPDSVLCLVCQGILIKPIKLP-CNHHVCLECLQRICDNSNLSCPMCR 76
+E+ ++ + T D C VCQ +L P++ C H C +C S + CP+CR
Sbjct: 2 SEELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCR 58
>ZFIN|ZDB-GENE-030131-2628 [details] [associations]
symbol:mex3b "mex-3 homolog B (C. elegans)"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50089
SMART:SM00184 SMART:SM00322 ZFIN:ZDB-GENE-030131-2628 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG071698 KO:K15686 CTD:84206 eggNOG:NOG260228
HOGENOM:HOG000236282 OMA:SPDGCPE OrthoDB:EOG4XPQG9
GeneTree:ENSGT00390000018714 EMBL:CU929131 EMBL:BC131871
IPI:IPI00610368 RefSeq:NP_001074462.1 UniGene:Dr.105567 SMR:A2RRV6
Ensembl:ENSDART00000101537 GeneID:569582 KEGG:dre:569582
NextBio:20889751 Uniprot:A2RRV6
Length = 537
Score = 103 (41.3 bits), Expect = 0.00032, P = 0.00032
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 15 VNSKMDNEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHV-CLECLQRICDNSNLSCP 73
++S + +S+ T S C VC + +PC H++ C+EC RIC+ + CP
Sbjct: 464 ISSSSSSSSSSSSGTSRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICERNEPKCP 523
Query: 74 MCRKRLSIWLR 84
+C ++ +R
Sbjct: 524 VCHAAVTQAIR 534
>UNIPROTKB|K7GRY7 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104499
EMBL:CT737425 Ensembl:ENSSSCT00000035216 Uniprot:K7GRY7
Length = 544
Score = 103 (41.3 bits), Expect = 0.00033, P = 0.00033
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICD--NSNLSCPMCRK 77
+ V+C +C IL P + C H CL+C+ R + +S + CP+C K
Sbjct: 12 EEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNK 58
>UNIPROTKB|B6ICU7 [details] [associations]
symbol:TRIM31 "Tripartite motif-containing protein 31"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 CTD:11074 eggNOG:NOG310139 HOVERGEN:HBG083771
KO:K12011 OrthoDB:EOG4K0QNJ GeneTree:ENSGT00700000104499
EMBL:CT737425 EMBL:AP009553 RefSeq:XP_001928015.3
Ensembl:ENSSSCT00000001348 GeneID:100154496 KEGG:ssc:100154496
OMA:HDSITET Uniprot:B6ICU7
Length = 576
Score = 103 (41.3 bits), Expect = 0.00035, P = 0.00035
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICD--NSNLSCPMCRK 77
+ V+C +C IL P + C H CL+C+ R + +S + CP+C K
Sbjct: 12 EEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNK 58
>UNIPROTKB|F1RYH5 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:11074 KO:K12011 GeneTree:ENSGT00700000104499 EMBL:CU607067
RefSeq:NP_001193331.1 UniGene:Ssc.26008 UniGene:Ssc.83065
Ensembl:ENSSSCT00000001357 GeneID:100154124 KEGG:ssc:100154124
OMA:WEAELQG Uniprot:F1RYH5
Length = 576
Score = 103 (41.3 bits), Expect = 0.00035, P = 0.00035
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICD--NSNLSCPMCRK 77
+ V+C +C IL P + C H CL+C+ R + +S + CP+C K
Sbjct: 12 EEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNK 58
>UNIPROTKB|J9P6W1 [details] [associations]
symbol:RNFT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014213
OMA:LNPTLDH EMBL:AAEX03006588 Ensembl:ENSCAFT00000043037
Uniprot:J9P6W1
Length = 397
Score = 102 (41.0 bits), Expect = 0.00035, P = 0.00035
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 36 LCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKD 88
+C VCQ KPI L C H C EC+ + N +CP+CR +S + + KD
Sbjct: 336 ICSVCQAEFQKPILLICQHIFCEECIT-LWFNREKTCPLCRTVISDHINKWKD 387
>UNIPROTKB|F1NV67 [details] [associations]
symbol:TRIM13 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0010332
"response to gamma radiation" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005789 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0010332 GO:GO:0004871 GO:GO:0010942
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038
GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
GeneTree:ENSGT00690000101726 OMA:QPLNIFC EMBL:AADN02005382
IPI:IPI00811205 Ensembl:ENSGALT00000027478 Uniprot:F1NV67
Length = 410
Score = 102 (41.0 bits), Expect = 0.00037, P = 0.00037
Identities = 28/93 (30%), Positives = 44/93 (47%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDN---------SNLSCPMCRKRLS 80
L + + C +C + P LPC+H+ C +CL+ I D S CP CRK
Sbjct: 5 LLEEDLTCPICCSLFDDPRVLPCSHNFCRKCLEGILDGNVRNVLWRPSPFKCPTCRKETP 64
Query: 81 IWLRRNKDFSLLIDENLWNQIQKYYKKEVDQKL 113
+ N SL ++ +L ++KY K +V K+
Sbjct: 65 V-TGVN---SLQVNYSLKGIVEKYNKIKVTPKM 93
>DICTYBASE|DDB_G0282115 [details] [associations]
symbol:DDB_G0282115 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
dictyBase:DDB_G0282115 Pfam:PF00097 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000045 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 RefSeq:XP_640361.1
ProteinModelPortal:Q54SZ4 EnsemblProtists:DDB0233436 GeneID:8623416
KEGG:ddi:DDB_G0282115 InParanoid:Q54SZ4 OMA:DIVITTH
ProtClustDB:CLSZ2430494 Uniprot:Q54SZ4
Length = 1640
Score = 98 (39.6 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 31 TPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRIC---DNSN--LS-CPMCRKRLSIWLR 84
T V+C C+ I + P+K C H CL+C + + DN+N +S CP C L +
Sbjct: 1308 TSTDVICNSCKDIAVNPVKNHCGHDFCLDCFEDLVRNPDNNNNRVSLCPECDSELILQDN 1367
Query: 85 RNKDFS 90
N D S
Sbjct: 1368 TNGDDS 1373
Score = 44 (20.5 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 3 DKKVFRDVSLLLVNSKMDNED 23
+K++ RD+S L + ++ NED
Sbjct: 302 NKQIKRDISFLNTDPEIGNED 322
Score = 36 (17.7 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 5/19 (26%), Positives = 13/19 (68%)
Query: 95 ENLWNQIQKYYKKEVDQKL 113
+ L+NQ ++ ++ E+ +L
Sbjct: 1411 DQLYNQTERQFQNELHNRL 1429
>MGI|MGI:1923931 [details] [associations]
symbol:Trim12a "tripartite motif-containing 12A"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:1923931
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 EMBL:AF220126 EMBL:AK009769 IPI:IPI00469341
RefSeq:NP_076324.2 UniGene:Mm.458309 UniGene:Mm.486388
ProteinModelPortal:Q99PQ1 SMR:Q99PQ1 STRING:Q99PQ1 PRIDE:Q99PQ1
Ensembl:ENSMUST00000070943 Ensembl:ENSMUST00000106839 GeneID:76681
KEGG:mmu:76681 CTD:76681 eggNOG:NOG310455 NextBio:345615
Bgee:Q99PQ1 CleanEx:MM_TRIM12 Genevestigator:Q99PQ1
GermOnline:ENSMUSG00000066258 Uniprot:Q99PQ1
Length = 284
Score = 101 (40.6 bits), Expect = 0.00039, P = 0.00039
Identities = 28/91 (30%), Positives = 45/91 (49%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECL----QRI-CDNSNLSCPMCRKRLSIW-LRRN 86
+ V C VC +++KP+ C H C C+ + I CD CP+CR LR N
Sbjct: 11 EEVTCPVCLNLMVKPVSADCGHTFCQGCITLYFESIKCDKKVFICPVCRISYQFSNLRPN 70
Query: 87 KDFSLLIDENLWNQIQKYYKK--EVDQKLFD 115
++ + ++ E L K +K E +QK+F+
Sbjct: 71 RNVANIV-ERL-----KMFKPSPEEEQKVFN 95
>ZFIN|ZDB-GENE-080219-13 [details] [associations]
symbol:trim35-39 "tripartite motif containing 35-39"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080219-13 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX005466 IPI:IPI00932638 Ensembl:ENSDART00000082154
OMA:ICEVISS Bgee:F1QQG3 Uniprot:F1QQG3
Length = 447
Score = 102 (41.0 bits), Expect = 0.00042, P = 0.00042
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 28 NTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNS-NLSCPMCRKRLS 80
++L+ + C +C I PI L C+H C EC+Q+ + CP+CR+R S
Sbjct: 2 DSLSVKEISCPICCEIFKSPILLSCSHSFCKECIQQFWRTKISRECPVCRRRSS 55
>DICTYBASE|DDB_G0286991 [details] [associations]
symbol:DDB_G0286991 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
dictyBase:DDB_G0286991 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:KOG2177 EMBL:AAFI02000093
RefSeq:XP_637452.1 ProteinModelPortal:Q54L05
EnsemblProtists:DDB0187224 GeneID:8625898 KEGG:ddi:DDB_G0286991
InParanoid:Q54L05 OMA:FDIETHI Uniprot:Q54L05
Length = 459
Score = 98 (39.6 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQR--ICDNSNLSCPMCRKRLSIWLRRNKDFSLLID 94
C +C + +PI LPCNH+ C C++ I CP CR + + + D L ++
Sbjct: 64 CSICYELFERPIILPCNHNFCKSCIEDMVIGQKQIFHCPFCRTEVKL-TEKGVD-GLPVN 121
Query: 95 ENLWNQIQK 103
L+ ++K
Sbjct: 122 SFLFTAVEK 130
Score = 37 (18.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 105 YKKEVDQKLFDQDDGVWEN 123
+KK V+ K+ +D V EN
Sbjct: 365 WKKIVEAKILQKDREVCEN 383
>UNIPROTKB|Q32LN5 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016055
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 EMBL:BC109497 IPI:IPI00709714
RefSeq:NP_001033263.1 UniGene:Bt.45000 ProteinModelPortal:Q32LN5
PRIDE:Q32LN5 Ensembl:ENSBTAT00000026851 GeneID:538445
KEGG:bta:538445 CTD:51444 eggNOG:NOG44750 InParanoid:Q32LN5
KO:K10668 OMA:EANFTRQ OrthoDB:EOG4J9N0K NextBio:20877365
Uniprot:Q32LN5
Length = 245
Score = 100 (40.3 bits), Expect = 0.00043, P = 0.00043
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 22 EDCNSNNTLTPDSVLCLVCQGILIKPIKLP-CNHHVCLECLQRICDNSNLSCPMCR 76
E+ ++ + T D C VCQ +L P++ C H C +C S + CP+CR
Sbjct: 3 EELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCR 58
>UNIPROTKB|F1SAL6 [details] [associations]
symbol:RNF138 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063064 KO:K10668 OMA:EANFTRQ EMBL:CU467523
EMBL:CU019565 RefSeq:XP_003127930.1 UniGene:Ssc.63848
Ensembl:ENSSSCT00000004130 GeneID:100515956 KEGG:ssc:100515956
Uniprot:F1SAL6
Length = 245
Score = 100 (40.3 bits), Expect = 0.00043, P = 0.00043
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 22 EDCNSNNTLTPDSVLCLVCQGILIKPIKLP-CNHHVCLECLQRICDNSNLSCPMCR 76
E+ ++ + T D C VCQ +L P++ C H C +C S + CP+CR
Sbjct: 3 EELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCR 58
>ZFIN|ZDB-GENE-040426-2500 [details] [associations]
symbol:lnx2b "ligand of numb-protein X 2b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IPI] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070936 "protein K48-linked ubiquitination" evidence=IDA]
[GO:0070534 "protein K63-linked ubiquitination" evidence=IDA]
Pfam:PF00595 InterPro:IPR001841 InterPro:IPR001478 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00184 SMART:SM00228 Prosite:PS00518
ZFIN:ZDB-GENE-040426-2500 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GeneTree:ENSGT00650000092901
HOGENOM:HOG000261605 HOVERGEN:HBG039539 KO:K10692 EMBL:BX247946
EMBL:BC139538 EMBL:FJ156084 IPI:IPI00612858 RefSeq:NP_998105.2
UniGene:Dr.30341 STRING:A4VCF7 Ensembl:ENSDART00000105721
GeneID:564464 KEGG:dre:564464 CTD:564464 eggNOG:NOG324232
OMA:IKTIVPG OrthoDB:EOG4933HN NextBio:20885394 Uniprot:A4VCF7
Length = 678
Score = 103 (41.3 bits), Expect = 0.00043, P = 0.00043
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLL 92
D ++C +C L++P+ PC H C +CL + + CP+ R+R+ L++ + SLL
Sbjct: 42 DELVCHICLQPLLQPMDTPCGHTYCFQCLSNFLHDQDF-CPVDRQRIQ--LQQCRASSLL 98
Query: 93 IDENLWNQI 101
+ NL +++
Sbjct: 99 V-RNLLDKL 106
>UNIPROTKB|F1M3D1 [details] [associations]
symbol:F1M3D1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003593 PROSITE:PS50089 SMART:SM00184
SMART:SM00382 Prosite:PS00518 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0017111
InterPro:IPR017907 IPI:IPI00949945 PRIDE:F1M3D1
Ensembl:ENSRNOT00000004904 ArrayExpress:F1M3D1 Uniprot:F1M3D1
Length = 3277
Score = 104 (41.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLLIDEN 96
C +CQG P+ LPC+H CL C+Q + CP C+ L +K FS + +N
Sbjct: 2066 CSICQGDAQDPVCLPCDHVYCLPCIQTWLAPGQMICPYCKTELP-----DK-FSPTVSQN 2119
Query: 97 LWNQIQKY 104
I+K+
Sbjct: 2120 HRKAIEKH 2127
Score = 36 (17.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 10 VSLLLVNSKMDNEDC 24
V LL + +MD+ +C
Sbjct: 1367 VDFLLAHLRMDHHEC 1381
>UNIPROTKB|F1MVU7 [details] [associations]
symbol:TRIM58 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646 CTD:25893
KO:K12027 EMBL:DAAA02020134 EMBL:DAAA02020135 IPI:IPI00711932
RefSeq:XP_002689127.1 RefSeq:XP_603937.2 UniGene:Bt.87597
ProteinModelPortal:F1MVU7 PRIDE:F1MVU7 Ensembl:ENSBTAT00000009824
GeneID:525584 KEGG:bta:525584 OMA:FQVDIKL NextBio:20874195
Uniprot:F1MVU7
Length = 487
Score = 102 (41.0 bits), Expect = 0.00048, P = 0.00048
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDNSN------LSCPMCRK--RLSIWLRRNKD 88
C VC L P+ + C H CL C+ C+ S+ +CP CR RL + R N+
Sbjct: 16 CPVCLDFLQNPVSVDCGHSFCLRCISEFCEKSDSAQGGIYACPQCRGPFRLESF-RPNRQ 74
Query: 89 FSLLID 94
+ L+D
Sbjct: 75 LASLVD 80
>ZFIN|ZDB-GENE-040813-1 [details] [associations]
symbol:rnf114 "ring finger protein 114" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 Prosite:PS00518 Pfam:PF05605
ZFIN:ZDB-GENE-040813-1 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008598 CTD:55905 eggNOG:NOG145063
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OMA:IEHIQRR OrthoDB:EOG4CVG7Q
EMBL:CR759920 EMBL:BC079515 EMBL:AY609381 IPI:IPI00508716
RefSeq:NP_001001828.2 UniGene:Dr.86280 Ensembl:ENSDART00000019667
GeneID:414843 KEGG:dre:414843 InParanoid:Q6J0N1 NextBio:20818739
Uniprot:Q6J0N1
Length = 221
Score = 99 (39.9 bits), Expect = 0.00049, P = 0.00049
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 28 NTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLR 84
N D +C VC I ++P+ C H C +CLQ + C +CR L W +
Sbjct: 13 NDAEDDDFVCPVCLEIFVRPMTTQCGHTFCNDCLQECLRPQSPVCAVCRTDLRKWAK 69
>UNIPROTKB|F6UA42 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0000791 "euchromatin" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005657 "replication fork"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0010216
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791 KO:K10638
Gene3D:2.30.280.10 CTD:29128 GO:GO:0044729 InterPro:IPR021991
Pfam:PF12148 EMBL:AAMC01100082 EMBL:AAMC01100083 EMBL:AAMC01100084
EMBL:AAMC01100085 EMBL:AAMC01100086 EMBL:AAMC01100087
RefSeq:XP_002940183.1 GeneID:100491405 KEGG:xtr:100491405
Xenbase:XB-GENE-5821474 Bgee:F6UA42 Uniprot:F6UA42
Length = 775
Score = 103 (41.3 bits), Expect = 0.00051, P = 0.00051
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRL--SIWLRRNKDFS 90
++ LC+ CQ ++ +PI C+H++C CL R +CP CR L + L NK
Sbjct: 702 ETFLCICCQEVVYEPITTECHHNICKGCLDRSFKALVHNCPACRHDLGKNYSLNVNKPLQ 761
Query: 91 LLIDE 95
++ +
Sbjct: 762 AILSQ 766
>UNIPROTKB|Q1LZA9 [details] [associations]
symbol:TRIM27 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:1900041 "negative regulation of interleukin-2
secretion" evidence=IEA] [GO:0090281 "negative regulation of
calcium ion import" evidence=IEA] [GO:0072643 "interferon-gamma
secretion" evidence=IEA] [GO:0070206 "protein trimerization"
evidence=IEA] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IEA] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0002820
"negative regulation of adaptive immune response" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 InterPro:IPR020457
Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0005654 GO:GO:0006469
GO:GO:0046872 GO:GO:0008270 GO:GO:0031965 GO:GO:0000122
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0032720 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GO:GO:0072643 GO:GO:1900041 GO:GO:0090281 GO:GO:0045814
HOGENOM:HOG000234133 HOVERGEN:HBG001357 GO:GO:0002820 CTD:5987
eggNOG:NOG252602 KO:K12009 OMA:FSGHVGS OrthoDB:EOG4BVRTF
GeneTree:ENSGT00700000104307 EMBL:DAAA02055446 EMBL:BC116113
IPI:IPI00715826 RefSeq:NP_001069267.1 UniGene:Bt.21774 SMR:Q1LZA9
Ensembl:ENSBTAT00000001158 GeneID:520111 KEGG:bta:520111
InParanoid:Q1LZA9 NextBio:20873027 Uniprot:Q1LZA9
Length = 513
Score = 102 (41.0 bits), Expect = 0.00051, P = 0.00051
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRI--CDNSNLSCPMCRK 77
C VC ++P+ L C H++C CL R +N+SCP CR+
Sbjct: 16 CPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRE 58
>UNIPROTKB|K7GND2 [details] [associations]
symbol:TRIM27 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 InterPro:IPR020457
Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:FP085562 RefSeq:XP_003128283.1
Ensembl:ENSSSCT00000033899 GeneID:100523617 Uniprot:K7GND2
Length = 513
Score = 102 (41.0 bits), Expect = 0.00051, P = 0.00051
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRI--CDNSNLSCPMCRK 77
C VC ++P+ L C H++C CL R +N+SCP CR+
Sbjct: 16 CPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRE 58
>MGI|MGI:97904 [details] [associations]
symbol:Trim27 "tripartite motif-containing 27" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO] [GO:0002820
"negative regulation of adaptive immune response" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006469 "negative regulation of
protein kinase activity" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=ISO]
[GO:0045814 "negative regulation of gene expression, epigenetic"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070206 "protein trimerization" evidence=ISO] [GO:0072643
"interferon-gamma secretion" evidence=ISO] [GO:0090281 "negative
regulation of calcium ion import" evidence=ISO] [GO:1900041
"negative regulation of interleukin-2 secretion" evidence=ISO]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643
PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 MGI:MGI:97904 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0005654 GO:GO:0006469 GO:GO:0046872
GO:GO:0003677 GO:GO:0016605 GO:GO:0008270 GO:GO:0031965
GO:GO:0006351 GO:GO:0000122 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0032720 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0070206 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0072643
GO:GO:1900041 GO:GO:0090281 GO:GO:0045814 HOVERGEN:HBG001357
GO:GO:0002820 CTD:5987 eggNOG:NOG252602 KO:K12009 OMA:FSGHVGS
OrthoDB:EOG4BVRTF ChiTaRS:TRIM27 EMBL:L46855 EMBL:AK088180
EMBL:BC003219 EMBL:X75343 IPI:IPI00122244 PIR:S37583
RefSeq:NP_033080.2 UniGene:Mm.314056 UniGene:Mm.490349
ProteinModelPortal:Q62158 SMR:Q62158 IntAct:Q62158 STRING:Q62158
PhosphoSite:Q62158 PRIDE:Q62158 Ensembl:ENSMUST00000021761
GeneID:19720 KEGG:mmu:19720 UCSC:uc007ppy.1
GeneTree:ENSGT00700000104307 InParanoid:Q62158 NextBio:297124
Bgee:Q62158 CleanEx:MM_TRIM27 Genevestigator:Q62158
GermOnline:ENSMUSG00000021326 Uniprot:Q62158
Length = 513
Score = 102 (41.0 bits), Expect = 0.00051, P = 0.00051
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRI--CDNSNLSCPMCRK 77
C VC ++P+ L C H++C CL R +N+SCP CR+
Sbjct: 16 CPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRE 58
>UNIPROTKB|E1C7S4 [details] [associations]
symbol:TRIM50 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 CTD:135892 KO:K12024 EMBL:AADN02026109
IPI:IPI00578516 RefSeq:XP_415709.2 ProteinModelPortal:E1C7S4
Ensembl:ENSGALT00000001270 GeneID:417461 KEGG:gga:417461
OMA:MARKMSI NextBio:20820753 Uniprot:E1C7S4
Length = 492
Score = 94 (38.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICD--NSNLSCPMCRK 77
D +LC +C + +P+ L C H C C+ + + L CP+CRK
Sbjct: 12 DQLLCPICLEVFKEPLMLQCGHSYCKSCVLSLSGELDEQLLCPVCRK 58
Score = 44 (20.5 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 114 FDQDD---GVWENYHQHISTYLLTAPTYLQ 140
F QDD VW+ H+H+ L AP L+
Sbjct: 274 FHQDDIKMTVWKRLHRHV----LPAPEMLK 299
>ZFIN|ZDB-GENE-130107-1 [details] [associations]
symbol:trim8a "tripartite motif containing 8a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:JX266663 Uniprot:J9UF94
Length = 560
Score = 102 (41.0 bits), Expect = 0.00058, P = 0.00058
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRIC--DNSNLSCPMCRKRLS 80
+ ++C +C + ++P++LPC H+ C C+ D +N+ CP C S
Sbjct: 11 EELICPICLHVFVEPVQLPCKHNFCRGCISEAWAKDAANVRCPECNHAYS 60
>ZFIN|ZDB-GENE-110408-1 [details] [associations]
symbol:ftr28l "finTRIM family, member 28-like"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-110408-1 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00670000097622 EMBL:AL929146
IPI:IPI00971906 Ensembl:ENSDART00000113067 Uniprot:F1R059
Length = 358
Score = 101 (40.6 bits), Expect = 0.00058, P = 0.00058
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 26 SNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN-----LSCPMCRKRLS 80
S+ ++ D C VC +L P+ +PC H C+ C+ C N SCP CR+ S
Sbjct: 4 SSFSVAQDEFSCAVCLDLLKDPVSIPCGHSYCMSCITD-CWNQEDQKRVYSCPQCRQTFS 62
>UNIPROTKB|F1RZM3 [details] [associations]
symbol:RFPL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099707 EMBL:CU019570
Ensembl:ENSSSCT00000004891 Uniprot:F1RZM3
Length = 286
Score = 100 (40.3 bits), Expect = 0.00059, P = 0.00059
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQ---RICDNSNLSCPMCR 76
D C VC + PI L C H CL C+Q + ++ L CPMCR
Sbjct: 7 DEAACTVCLEVFFSPITLSCTHTFCLYCMQSWMKEQEDLKLVCPMCR 53
>RGD|1308222 [details] [associations]
symbol:Lnx2 "ligand of numb-protein X 2" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IEA;ISO] [GO:0051260
"protein homooligomerization" evidence=IEA;ISO] Pfam:PF00595
InterPro:IPR001841 InterPro:IPR001478 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00184 SMART:SM00228 RGD:1308222
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156
InterPro:IPR017907 GeneTree:ENSGT00650000092901 OrthoDB:EOG4ZW59N
IPI:IPI00765318 ProteinModelPortal:D3ZRH6
Ensembl:ENSRNOT00000001263 UCSC:RGD:1308222 Uniprot:D3ZRH6
Length = 588
Score = 102 (41.0 bits), Expect = 0.00062, P = 0.00062
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLL 92
D ++C +C L++P+ PC H C +CL+ + CP+ RKRL L + S+L
Sbjct: 47 DDLVCHICLQPLLQPLDTPCGHTFCHKCLRNFLQEKDF-CPLDRKRLHFKLCKKS--SIL 103
Query: 93 IDENL 97
+ + L
Sbjct: 104 VHKLL 108
>UNIPROTKB|F1S1Q0 [details] [associations]
symbol:TRIM27 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:1900041 "negative regulation of interleukin-2
secretion" evidence=IEA] [GO:0090281 "negative regulation of
calcium ion import" evidence=IEA] [GO:0072643 "interferon-gamma
secretion" evidence=IEA] [GO:0070206 "protein trimerization"
evidence=IEA] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IEA] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0002820
"negative regulation of adaptive immune response" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 InterPro:IPR020457
Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0005654 GO:GO:0006469
GO:GO:0046872 GO:GO:0008270 GO:GO:0031965 GO:GO:0000122
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0032720 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GO:GO:0072643 GO:GO:1900041 GO:GO:0090281 GO:GO:0045814
GO:GO:0002820 OMA:FSGHVGS GeneTree:ENSGT00700000104307
EMBL:FP085562 Ensembl:ENSSSCT00000001317 Uniprot:F1S1Q0
Length = 617
Score = 102 (41.0 bits), Expect = 0.00066, P = 0.00066
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRI--CDNSNLSCPMCRK 77
C VC ++P+ L C H++C CL R +N+SCP CR+
Sbjct: 120 CPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRE 162
>ZFIN|ZDB-GENE-050302-100 [details] [associations]
symbol:rnf213a "ring finger protein 213a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0002040 "sprouting angiogenesis" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-050302-100 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0002040
InterPro:IPR017907 GeneTree:ENSGT00630000089884 EMBL:AL953879
EMBL:CABZ01009732 EMBL:CR759836 EMBL:CT573461 IPI:IPI00897120
Ensembl:ENSDART00000108501 Bgee:E7F7V0 Uniprot:E7F7V0
Length = 1757
Score = 104 (41.7 bits), Expect = 0.00068, P = 0.00068
Identities = 28/95 (29%), Positives = 44/95 (46%)
Query: 4 KKVFRDVSLLLVNSKMDNEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQR 63
KK F V +L K D S + LC VC G P+ LPC+H CL C+++
Sbjct: 524 KKPFEAVITVLKTCK----DKASQRIIRYGLQLCPVCMGDPRDPLSLPCDHIYCLTCIRQ 579
Query: 64 ICDNSNLSCPMCRKRL--SIWLRRNKDFSLLIDEN 96
+ CP+C + + + L+ + + LI +N
Sbjct: 580 WLVPGQMHCPLCVQEVPDNFELKPSDELRRLISQN 614
>ZFIN|ZDB-GENE-070615-21 [details] [associations]
symbol:zgc:165481 "zgc:165481" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-070615-21 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00530000063683 EMBL:BX571680
IPI:IPI00800624 Ensembl:ENSDART00000084355 OMA:ECKICYQ Bgee:F1RE02
Uniprot:F1RE02
Length = 255
Score = 99 (39.9 bits), Expect = 0.00069, P = 0.00069
Identities = 25/74 (33%), Positives = 35/74 (47%)
Query: 16 NSKMDNEDCNSNNTLTPDSVLCLVC-QGILI---KPIKLPCNHHVCLECLQRICD----N 67
++ N + S N T D + C +C Q KP L C H VC CL +I D +
Sbjct: 12 STNASNTNNTSLNCTTNDELECKICYQRFNTHSRKPKILDCLHRVCARCLNKILDMGDGS 71
Query: 68 SNLSCPMCRKRLSI 81
S++SCP CR +
Sbjct: 72 SSISCPFCRHETQV 85
>UNIPROTKB|J9JH84 [details] [associations]
symbol:RNF169 "E3 ubiquitin-protein ligase RNF169"
species:9913 "Bos taurus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00620000087973
EMBL:DAAA02041058 EMBL:DAAA02041059 OMA:ETCCSSE
Ensembl:ENSBTAT00000000969 Uniprot:J9JH84
Length = 654
Score = 102 (41.0 bits), Expect = 0.00071, P = 0.00071
Identities = 21/49 (42%), Positives = 24/49 (48%)
Query: 40 CQGILIKP---IKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRR 85
C G L P LPC H +C C QR D + CP CR R + W RR
Sbjct: 14 CAGCLETPGEAAALPCGHSLCRGCAQRAADAAGPCCPRCRARGAGWARR 62
>UNIPROTKB|Q32L60 [details] [associations]
symbol:TRIM13 "E3 ubiquitin-protein ligase TRIM13"
species:9913 "Bos taurus" [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0097038 "perinuclear endoplasmic
reticulum" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010332 "response to
gamma radiation" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0010332 GO:GO:0004871
GO:GO:0010942 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433
GO:GO:0097038 GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865
GO:GO:0016239 CTD:10206 KO:K12003 EMBL:DAAA02032918 EMBL:BC109749
IPI:IPI00690395 RefSeq:NP_001033254.1 UniGene:Bt.5644
ProteinModelPortal:Q32L60 Ensembl:ENSBTAT00000010745 GeneID:535190
KEGG:bta:535190 GeneTree:ENSGT00690000101726 HOGENOM:HOG000290663
OMA:QPLNIFC NextBio:20876654 Uniprot:Q32L60
Length = 407
Score = 101 (40.6 bits), Expect = 0.00071, P = 0.00071
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICD---------NSNLSCPMCRKRLS 80
L + + C +C + P LPC+H+ C +CL+ I + +S CP CRK S
Sbjct: 3 LLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGNVRNSLWRSSPFKCPTCRKETS 62
Query: 81 IWLRRNKDFSLLIDENLWNQIQKYYKKEVDQKL 113
N SL ++ +L ++KY K +V K+
Sbjct: 63 A-TGVN---SLQVNYSLKGIVEKYNKIKVSPKM 91
>UNIPROTKB|A2AAZ6 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HOVERGEN:HBG001357
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00643713 SMR:A2AAZ6 Ensembl:ENST00000428728
Ensembl:ENST00000431871 Ensembl:ENST00000440130
Ensembl:ENST00000442914 Ensembl:ENST00000447077
Ensembl:ENST00000449396 Ensembl:ENST00000450421 Uniprot:A2AAZ6
Length = 261
Score = 99 (39.9 bits), Expect = 0.00072, P = 0.00072
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDN--SNLSCPMCRKRLSIW-LRRNKDFSLLI 93
C VC L +P+ + C H+ C C+ R ++ + CP+CRK LR N+ ++
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMV 88
Query: 94 DENLWNQIQKYYKKEVDQKLFDQ 116
+ + Q+Q +K D+ L Q
Sbjct: 89 E--IAKQLQAVKRKIRDESLCPQ 109
>UNIPROTKB|A2AAZ4 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00790609 SMR:A2AAZ4
Ensembl:ENST00000412150 Ensembl:ENST00000418057
Ensembl:ENST00000426676 Ensembl:ENST00000438089
Ensembl:ENST00000440271 Ensembl:ENST00000447542
Ensembl:ENST00000450818 Uniprot:A2AAZ4
Length = 74
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 37 CLVCQGILIKPIKLPCNHHVCLECLQRICDN--SNLSCPMCRK 77
C VC L +P+ + C H+ C C+ R ++ + CP+CRK
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
>MGI|MGI:1913847 [details] [associations]
symbol:Trim13 "tripartite motif-containing 13" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0004871 "signal transducer activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016239 "positive regulation of macroautophagy" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=ISO] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:1913847 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0010332 GO:GO:0004871 GO:GO:0010942 EMBL:CH466535
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038
GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
CTD:10206 KO:K12003 GeneTree:ENSGT00690000101726
HOGENOM:HOG000290663 OMA:QPLNIFC eggNOG:NOG238872
HOVERGEN:HBG056536 OrthoDB:EOG46MBJP EMBL:AY033605 EMBL:AK013959
EMBL:AK017850 EMBL:BC138576 EMBL:BC145915 EMBL:AF220129
EMBL:AF302839 IPI:IPI00111312 RefSeq:NP_001157692.1
RefSeq:NP_075722.1 UniGene:Mm.23959 ProteinModelPortal:Q9CYB0
SMR:Q9CYB0 STRING:Q9CYB0 PhosphoSite:Q9CYB0 PRIDE:Q9CYB0
Ensembl:ENSMUST00000039562 Ensembl:ENSMUST00000165015 GeneID:66597
KEGG:mmu:66597 InParanoid:Q9CYB0 NextBio:322120 Bgee:Q9CYB0
CleanEx:MM_TRIM13 Genevestigator:Q9CYB0
GermOnline:ENSMUSG00000035235 Uniprot:Q9CYB0
Length = 407
Score = 97 (39.2 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 30 LTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDN---------SNLSCPMCRKRLS 80
L + + C +C + P LPC+H+ C +CL+ + + S CP CRK S
Sbjct: 3 LLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKETS 62
Query: 81 IWLRRNKDFSLLIDENLWNQIQKYYKKEVDQKL 113
N SL ++ +L ++KY K ++ K+
Sbjct: 63 A-TGVN---SLQVNYSLKGIVEKYNKIKISPKM 91
Score = 35 (17.4 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 4/23 (17%), Positives = 13/23 (56%)
Query: 121 WENYHQHISTYLLTAPTYLQHMI 143
W++Y ++YL + +++ +
Sbjct: 347 WKDYLSSFNSYLTKSADFIEQSV 369
>MGI|MGI:2155959 [details] [associations]
symbol:Lnx2 "ligand of numb-protein X 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] Pfam:PF00595 InterPro:IPR001841
InterPro:IPR001478 PROSITE:PS50089 PROSITE:PS50106 SMART:SM00184
SMART:SM00228 MGI:MGI:2155959 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0051260 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030165 SUPFAM:SSF50156 InterPro:IPR017907
GeneTree:ENSGT00650000092901 eggNOG:NOG236845 HOGENOM:HOG000261605
HOVERGEN:HBG039539 KO:K10692 CTD:222484 OMA:EKDFCPL
OrthoDB:EOG4ZW59N ChiTaRS:LNX2 EMBL:AF401681 EMBL:AK036218
EMBL:AL513345 EMBL:CH466614 IPI:IPI00314565 RefSeq:NP_542985.4
UniGene:Mm.272203 ProteinModelPortal:Q91XL2 SMR:Q91XL2
STRING:Q91XL2 PhosphoSite:Q91XL2 PRIDE:Q91XL2
Ensembl:ENSMUST00000016664 GeneID:140887 KEGG:mmu:140887
InParanoid:A6PW04 NextBio:370025 Bgee:Q91XL2 CleanEx:MM_LNX2
Genevestigator:Q91XL2 GermOnline:ENSMUSG00000016520 Uniprot:Q91XL2
Length = 687
Score = 102 (41.0 bits), Expect = 0.00075, P = 0.00075
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKDFSLL 92
D ++C +C L++P+ PC H C +CL+ + CP+ RKRL L + S+L
Sbjct: 47 DDLVCHICLQPLLQPLDTPCGHTFCHKCLRNFLQEKDF-CPLDRKRLHFKLCKKS--SIL 103
Query: 93 IDENL 97
+ + L
Sbjct: 104 VHKLL 108
>UNIPROTKB|F1MRW8 [details] [associations]
symbol:RNF169 "E3 ubiquitin-protein ligase RNF169"
species:9913 "Bos taurus" [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0070530
"K63-linked polyubiquitin binding" evidence=ISS] [GO:2000780
"negative regulation of double-strand break repair" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0031491 "nucleosome
binding" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005654 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0006974 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031491 GO:GO:0035861 GO:GO:0070530
GO:GO:2000780 EMBL:DAAA02041058 EMBL:DAAA02041059 IPI:IPI00827423
RefSeq:XP_002693509.1 UniGene:Bt.88089 GeneID:525756
KEGG:bta:525756 CTD:254225 Uniprot:F1MRW8
Length = 689
Score = 102 (41.0 bits), Expect = 0.00076, P = 0.00076
Identities = 21/49 (42%), Positives = 24/49 (48%)
Query: 40 CQGILIKP---IKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRR 85
C G L P LPC H +C C QR D + CP CR R + W RR
Sbjct: 49 CAGCLETPGEAAALPCGHSLCRGCAQRAADAAGPCCPRCRARGAGWARR 97
>ZFIN|ZDB-GENE-081031-50 [details] [associations]
symbol:btr19 "bloodthirsty-related gene family,
member 19" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-081031-50
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00670000097622
EMBL:CT030005 Ensembl:ENSDART00000146448 Uniprot:I3IRW2
Length = 192
Score = 97 (39.2 bits), Expect = 0.00077, P = 0.00077
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSN--LSCPMCRKRLSIWLRRNKDFS 90
+ + C +C + P+ PC H+ C CL C N SCP C++ + + D
Sbjct: 12 EDLQCSICLEVFTDPVSTPCGHNFCKSCLNT-CWNKTQTCSCPNCKETFT----QRPD-- 64
Query: 91 LLIDENLWNQIQKYYKKE 108
L I+ L +I ++YK+E
Sbjct: 65 LKINTTL-REISEHYKEE 81
>UNIPROTKB|Q5M7Z0 [details] [associations]
symbol:RNFT1 "RING finger and transmembrane
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0016021
GO:GO:0046872 GO:GO:0008270 EMBL:CH471109 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398 CTD:51136
eggNOG:NOG329292 HOGENOM:HOG000237544 HOVERGEN:HBG056546
OMA:LNPTLDH OrthoDB:EOG412M5F EMBL:AF100745 EMBL:AC004686
EMBL:AC005702 EMBL:BC006971 EMBL:BC088365 EMBL:AK098649
IPI:IPI00297702 IPI:IPI00871736 IPI:IPI00885196 RefSeq:NP_057209.3
UniGene:Hs.531701 ProteinModelPortal:Q5M7Z0 SMR:Q5M7Z0
IntAct:Q5M7Z0 PhosphoSite:Q5M7Z0 DMDM:121947809 PRIDE:Q5M7Z0
DNASU:51136 Ensembl:ENST00000305783 Ensembl:ENST00000482446
GeneID:51136 KEGG:hsa:51136 UCSC:uc002iya.3 UCSC:uc002iyd.4
GeneCards:GC17M058029 HGNC:HGNC:30206 HPA:HPA013739
neXtProt:NX_Q5M7Z0 PharmGKB:PA162401921 InParanoid:Q5M7Z0
GenomeRNAi:51136 NextBio:53987 ArrayExpress:Q5M7Z0 Bgee:Q5M7Z0
CleanEx:HS_RNFT1 Genevestigator:Q5M7Z0 Uniprot:Q5M7Z0
Length = 435
Score = 101 (40.6 bits), Expect = 0.00078, P = 0.00078
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 36 LCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLSIWLRRNKD 88
+C +CQ KPI L C H C EC+ + N +CP+CR +S + + KD
Sbjct: 374 ICSICQAEFQKPILLICQHIFCEECMT-LWFNREKTCPLCRTVISDHINKWKD 425
>WB|WBGene00015324 [details] [associations]
symbol:C02B8.6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR018123 PROSITE:PS50089 SMART:SM00184
SMART:SM00678 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR004170 Pfam:PF02825 PROSITE:PS50918
GeneTree:ENSGT00390000000358 eggNOG:NOG298024 EMBL:FO080272
PIR:T15375 RefSeq:NP_509369.2 ProteinModelPortal:Q11096 SMR:Q11096
PaxDb:Q11096 EnsemblMetazoa:C02B8.6 GeneID:181070
KEGG:cel:CELE_C02B8.6 UCSC:C02B8.6 CTD:181070 WormBase:C02B8.6
InParanoid:Q11096 NextBio:912272 Uniprot:Q11096
Length = 347
Score = 100 (40.3 bits), Expect = 0.00083, P = 0.00083
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 36 LCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRK 77
+C +C +P++L CNH C C++ N L+C +CR+
Sbjct: 4 ICTICHNTPNRPVRLDCNHEFCYICIKGSIQNDMLNCAVCRR 45
>UNIPROTKB|F1RZ50 [details] [associations]
symbol:TRIM10 "Tripartite motif-containing protein 10"
species:9823 "Sus scrofa" [GO:0030218 "erythrocyte differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0030218 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101808 EMBL:CU311184
Ensembl:ENSSSCT00000001343 OMA:EHREKVY Uniprot:F1RZ50
Length = 482
Score = 101 (40.6 bits), Expect = 0.00091, P = 0.00091
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRI----C-DNSNL-SCPMCRK 77
D V C +CQG L +P+ + C H+ C CL R C D L +CP+C++
Sbjct: 12 DEVNCPICQGTLREPVTIDCGHNFCCVCLTRYLEIPCLDPGELPTCPLCKE 62
>UNIPROTKB|O19085 [details] [associations]
symbol:TRIM10 "Tripartite motif-containing protein 10"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 HOVERGEN:HBG001357 CTD:10107 eggNOG:NOG301877
KO:K12002 EMBL:AJ251829 RefSeq:NP_001116679.1 UniGene:Ssc.29070
ProteinModelPortal:O19085 GeneID:100144459 KEGG:ssc:100144459
Uniprot:O19085
Length = 482
Score = 101 (40.6 bits), Expect = 0.00091, P = 0.00091
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 33 DSVLCLVCQGILIKPIKLPCNHHVCLECLQRI----C-DNSNL-SCPMCRK 77
D V C +CQG L +P+ + C H+ C CL R C D L +CP+C++
Sbjct: 12 DEVNCPICQGTLREPVTIDCGHNFCCVCLTRYLEIPCLDPGELPTCPLCKE 62
>WB|WBGene00010476 [details] [associations]
symbol:rnf-113 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GO:GO:0042127 GO:GO:0007281
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0040020
InterPro:IPR017907 eggNOG:COG5152 HOGENOM:HOG000174759 KO:K13127
GeneTree:ENSGT00390000016292 EMBL:Z92803 EMBL:AF304126 PIR:T23197
RefSeq:NP_499375.1 UniGene:Cel.19404 ProteinModelPortal:O17917
SMR:O17917 IntAct:O17917 MINT:MINT-1038148 PaxDb:O17917
EnsemblMetazoa:K01G5.1 GeneID:176507 KEGG:cel:CELE_K01G5.1
UCSC:K01G5.1.1 CTD:176507 WormBase:K01G5.1 InParanoid:O17917
OMA:DEEYEAG NextBio:892872 Uniprot:O17917
Length = 384
Score = 100 (40.3 bits), Expect = 0.00097, P = 0.00097
Identities = 25/109 (22%), Positives = 47/109 (43%)
Query: 21 NEDCNSNNTLTPDSVLCLVCQGILIKPIKLPCNHHVCLECLQRICDNSNLSCPMCRKRLS 80
N + + + P+ C +C + PI C H+ C C + S+ CP+C++
Sbjct: 227 NYEIHEGDDTFPED--CFICGNPFVDPIVTKCKHYFCTGCALKSFQKSS-KCPICQQNTE 283
Query: 81 IWLRRNKDFSLLIDENLWNQIQKYYKKEVDQKLFDQDDGVWE--NYHQH 127
+ K+ + Q Q+ K+E ++K D D+ E ++H H
Sbjct: 284 NIMNTAKELLTYLKRKKQQQKQEAEKQE-EEKDSDDDEKPHECDDHHHH 331
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.138 0.448 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 143 143 0.00091 102 3 11 22 0.40 31
30 0.48 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 244
No. of states in DFA: 605 (64 KB)
Total size of DFA: 177 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.85u 0.10s 17.95t Elapsed: 00:00:05
Total cpu time: 17.87u 0.10s 17.97t Elapsed: 00:00:05
Start: Thu Aug 15 15:38:39 2013 End: Thu Aug 15 15:38:44 2013
WARNINGS ISSUED: 1